Query 001059
Match_columns 1170
No_of_seqs 730 out of 4314
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 08:56:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001059.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001059hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g85_A Histidine-tRNA ligase, 100.0 4.8E-69 1.7E-73 655.0 40.6 429 711-1160 66-514 (517)
2 3net_A Histidyl-tRNA synthetas 100.0 1.6E-69 5.4E-74 649.2 35.7 412 713-1158 13-463 (465)
3 3lc0_A Histidyl-tRNA synthetas 100.0 4.1E-69 1.4E-73 641.3 37.7 405 713-1151 30-446 (456)
4 4g84_A Histidine--tRNA ligase, 100.0 3.5E-68 1.2E-72 641.1 39.5 427 713-1160 15-461 (464)
5 1wu7_A Histidyl-tRNA synthetas 100.0 1.7E-61 5.9E-66 577.1 40.0 409 713-1160 7-426 (434)
6 3od1_A ATP phosphoribosyltrans 100.0 1.3E-60 4.4E-65 559.2 37.6 373 712-1129 10-395 (400)
7 4e51_A Histidine--tRNA ligase; 100.0 1.7E-59 5.9E-64 561.6 34.8 397 712-1159 32-458 (467)
8 1h4v_B Histidyl-tRNA synthetas 100.0 3.5E-56 1.2E-60 529.8 39.8 398 713-1159 4-420 (421)
9 1htt_A Histidyl-tRNA synthetas 100.0 7.8E-57 2.7E-61 535.8 29.0 397 713-1159 5-422 (423)
10 3rac_A Histidine-tRNA ligase; 100.0 3.6E-54 1.2E-58 500.2 26.2 304 713-1053 24-364 (373)
11 3hyh_A Carbon catabolite-derep 100.0 1.5E-53 5E-58 476.6 23.5 260 347-665 5-268 (275)
12 4g31_A Eukaryotic translation 100.0 5.7E-53 2E-57 478.9 25.2 284 351-668 1-288 (299)
13 1qe0_A Histidyl-tRNA synthetas 100.0 1.8E-52 6.3E-57 497.7 29.5 395 713-1156 3-419 (420)
14 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.8E-53 9.4E-58 481.1 20.9 262 352-670 29-301 (311)
15 3fpq_A Serine/threonine-protei 100.0 4E-52 1.4E-56 468.9 28.0 254 357-665 28-288 (290)
16 4b9d_A Serine/threonine-protei 100.0 7.5E-53 2.6E-57 485.1 22.3 255 354-666 23-283 (350)
17 4fih_A Serine/threonine-protei 100.0 2.6E-52 9E-57 479.9 25.4 253 355-666 74-330 (346)
18 1z7m_A ATP phosphoribosyltrans 100.0 1.7E-52 5.7E-57 482.0 23.7 298 713-1053 23-335 (344)
19 3ubd_A Ribosomal protein S6 ki 100.0 7.5E-52 2.5E-56 469.1 18.1 258 355-671 24-293 (304)
20 4fie_A Serine/threonine-protei 100.0 6.8E-51 2.3E-55 479.3 25.9 253 355-666 151-407 (423)
21 4b99_A Mitogen-activated prote 100.0 2.7E-50 9.2E-55 474.2 28.2 267 355-666 54-351 (398)
22 4g3f_A NF-kappa-beta-inducing 100.0 7.5E-51 2.6E-55 466.4 20.3 249 354-660 57-310 (336)
23 3omv_A RAF proto-oncogene seri 100.0 1.2E-48 4.2E-53 443.6 24.4 250 354-660 35-294 (307)
24 4asz_A BDNF/NT-3 growth factor 100.0 2.7E-48 9.2E-53 440.2 23.3 248 354-659 12-282 (299)
25 4gt4_A Tyrosine-protein kinase 100.0 5.9E-48 2E-52 439.2 24.5 250 354-660 25-300 (308)
26 4aoj_A High affinity nerve gro 100.0 1.3E-47 4.6E-52 440.3 26.5 249 354-660 40-313 (329)
27 3v5w_A G-protein coupled recep 100.0 2.2E-47 7.4E-52 468.4 25.1 259 353-671 187-461 (689)
28 4ase_A Vascular endothelial gr 100.0 6E-47 2E-51 438.5 21.6 252 354-660 63-341 (353)
29 4f9c_A Cell division cycle 7-r 100.0 1.8E-46 6.1E-51 436.7 24.7 267 354-667 20-360 (361)
30 3uto_A Twitchin; kinase, muscl 100.0 1.1E-45 3.6E-50 455.1 27.0 258 351-667 153-418 (573)
31 1usy_A ATP phosphoribosyltrans 100.0 2.5E-45 8.7E-50 410.0 18.4 263 730-1048 4-273 (275)
32 3hmm_A TGF-beta receptor type- 100.0 1.3E-44 4.4E-49 411.6 19.7 253 355-660 3-291 (303)
33 3fe3_A MAP/microtubule affinit 100.0 2.3E-43 7.8E-48 405.9 28.3 255 353-666 13-271 (328)
34 3o0g_A Cell division protein k 100.0 8.9E-43 3E-47 392.8 26.9 259 354-667 1-290 (292)
35 3qd2_B Eukaryotic translation 100.0 7.6E-43 2.6E-47 398.9 25.3 310 351-666 2-332 (332)
36 2yab_A Death-associated protei 100.0 2.3E-42 7.9E-47 402.7 28.7 262 351-669 8-282 (361)
37 1o6l_A RAC-beta serine/threoni 100.0 1.9E-42 6.4E-47 399.8 26.8 259 354-671 4-272 (337)
38 3niz_A Rhodanese family protei 100.0 2.1E-42 7.2E-47 394.3 25.6 261 351-667 17-308 (311)
39 3zgw_A Maternal embryonic leuc 100.0 1.5E-42 5.1E-47 402.1 23.9 257 352-666 7-267 (347)
40 3txo_A PKC-L, NPKC-ETA, protei 100.0 1E-42 3.5E-47 404.6 21.9 261 352-671 20-292 (353)
41 3soa_A Calcium/calmodulin-depe 100.0 3.9E-42 1.3E-46 411.4 27.3 260 350-665 6-273 (444)
42 1ob3_A PFPK5, cell division co 100.0 3.3E-42 1.1E-46 387.7 24.9 257 354-666 1-287 (288)
43 1fot_A TPK1 delta, CAMP-depend 100.0 3.1E-42 1.1E-46 394.8 25.0 257 353-671 4-270 (318)
44 3fxz_A Serine/threonine-protei 100.0 5.3E-42 1.8E-46 388.5 26.0 255 353-666 18-276 (297)
45 3rp9_A Mitogen-activated prote 100.0 5E-42 1.7E-46 412.4 27.1 280 353-668 51-405 (458)
46 3oz6_A Mitogen-activated prote 100.0 3.5E-42 1.2E-46 404.7 25.0 276 352-666 6-335 (388)
47 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.3E-42 7.9E-47 397.0 22.6 265 349-668 28-327 (329)
48 2bdw_A Hypothetical protein K1 100.0 6.1E-42 2.1E-46 399.4 25.9 259 350-665 24-290 (362)
49 4dc2_A Protein kinase C IOTA t 100.0 8.6E-42 2.9E-46 402.3 26.4 262 352-672 49-331 (396)
50 3tki_A Serine/threonine-protei 100.0 5.2E-42 1.8E-46 393.5 23.1 261 352-666 4-268 (323)
51 2eue_A Carbon catabolite derep 100.0 3E-42 1E-46 384.8 20.5 261 347-666 5-269 (275)
52 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.9E-42 2.3E-46 397.1 24.3 257 353-671 39-305 (350)
53 2y0a_A Death-associated protei 100.0 1.9E-41 6.4E-46 389.2 27.1 260 352-668 8-280 (326)
54 3a8x_A Protein kinase C IOTA t 100.0 2.2E-41 7.6E-46 392.1 27.6 260 353-671 7-287 (345)
55 3g33_A Cell division protein k 100.0 2.8E-41 9.7E-46 383.5 27.8 263 353-667 7-304 (308)
56 1xjd_A Protein kinase C, theta 100.0 5.4E-42 1.8E-46 397.2 22.0 261 352-671 14-281 (345)
57 3ttj_A Mitogen-activated prote 100.0 9.8E-42 3.3E-46 410.6 25.1 261 353-666 60-362 (464)
58 4fr4_A YANK1, serine/threonine 100.0 1.7E-41 5.7E-46 398.4 26.1 261 352-671 12-283 (384)
59 2pmi_A Negative RE, cyclin-dep 100.0 1.2E-41 4E-46 389.1 24.1 259 354-668 4-302 (317)
60 1tki_A Titin; serine kinase, m 100.0 8.4E-42 2.9E-46 391.5 22.7 255 353-667 3-265 (321)
61 2i0e_A Protein kinase C-beta I 100.0 1.4E-41 4.8E-46 395.0 24.3 260 353-671 18-288 (353)
62 4agu_A Cyclin-dependent kinase 100.0 3.2E-41 1.1E-45 383.1 26.4 259 354-667 2-292 (311)
63 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.7E-42 6E-47 399.9 15.7 257 351-666 5-265 (336)
64 3p1a_A MYT1 kinase, membrane-a 100.0 3.1E-41 1.1E-45 384.5 25.7 255 348-665 50-310 (311)
65 3mwu_A Calmodulin-domain prote 100.0 1.1E-41 3.7E-46 412.7 23.2 261 348-666 15-283 (486)
66 1cm8_A Phosphorylated MAP kina 100.0 2.6E-41 8.7E-46 394.8 24.7 262 353-667 23-315 (367)
67 3kk8_A Calcium/calmodulin depe 100.0 7E-41 2.4E-45 375.0 26.9 260 351-667 2-269 (284)
68 2r5t_A Serine/threonine-protei 100.0 3.8E-41 1.3E-45 394.2 25.4 262 351-671 34-305 (373)
69 4aw2_A Serine/threonine-protei 100.0 1.1E-41 3.8E-46 406.4 21.2 264 354-671 73-350 (437)
70 3lij_A Calcium/calmodulin depe 100.0 3.7E-41 1.3E-45 408.9 26.2 259 351-667 33-299 (494)
71 3n9x_A Phosphotransferase; mal 100.0 5.6E-41 1.9E-45 400.5 27.1 283 350-667 21-369 (432)
72 3mi9_A Cell division protein k 100.0 4.8E-41 1.7E-45 389.0 25.5 271 353-666 15-318 (351)
73 3uc3_A Serine/threonine-protei 100.0 5.4E-41 1.8E-45 391.2 25.1 258 348-665 13-280 (361)
74 3a62_A Ribosomal protein S6 ki 100.0 9.4E-41 3.2E-45 383.6 26.5 259 353-670 15-287 (327)
75 3is5_A Calcium-dependent prote 100.0 7.6E-41 2.6E-45 376.1 24.5 258 349-665 16-284 (285)
76 2zv2_A Calcium/calmodulin-depe 100.0 3.8E-41 1.3E-45 380.6 22.0 257 353-664 11-297 (298)
77 3v8s_A RHO-associated protein 100.0 1.8E-41 6E-46 401.6 20.0 261 354-670 68-340 (410)
78 4ejn_A RAC-alpha serine/threon 100.0 3.9E-41 1.3E-45 403.4 22.9 259 353-670 146-415 (446)
79 2vd5_A DMPK protein; serine/th 100.0 2.3E-41 7.7E-46 400.9 20.5 263 354-671 60-339 (412)
80 3gni_B Strad alpha; kinase fol 100.0 5.7E-41 2E-45 394.3 23.5 267 354-668 24-342 (389)
81 3c0i_A Peripheral plasma membr 100.0 4E-41 1.4E-45 390.6 21.8 258 352-666 21-293 (351)
82 1t4h_A Serine/threonine-protei 100.0 3.1E-40 1.1E-44 371.4 28.2 256 355-665 26-288 (290)
83 2r3i_A Cell division protein k 100.0 2.1E-40 7.2E-45 373.9 26.4 259 354-667 2-291 (299)
84 3q5i_A Protein kinase; CDPK, m 100.0 1.5E-40 5.1E-45 404.6 26.9 259 350-666 31-308 (504)
85 3mtl_A Cell division protein k 100.0 3.2E-41 1.1E-45 386.7 19.6 258 354-667 1-289 (324)
86 2w4o_A Calcium/calmodulin-depe 100.0 1.8E-40 6E-45 385.0 25.7 255 352-667 50-313 (349)
87 2a2a_A Death-associated protei 100.0 2.8E-40 9.5E-45 378.1 26.8 262 351-669 8-282 (321)
88 1x8b_A WEE1HU, WEE1-like prote 100.0 2.1E-40 7.1E-45 370.4 25.1 255 350-667 6-287 (289)
89 2j3l_A Prolyl-tRNA synthetase; 100.0 6.1E-41 2.1E-45 413.2 22.4 411 714-1161 35-566 (572)
90 1kob_A Twitchin; kinase, intra 100.0 2.8E-40 9.4E-45 388.8 26.8 259 350-667 46-312 (387)
91 3llt_A Serine/threonine kinase 100.0 2E-40 6.8E-45 385.0 25.2 252 351-664 31-360 (360)
92 2xrw_A Mitogen-activated prote 100.0 2.3E-40 8E-45 387.0 25.2 261 353-666 23-325 (371)
93 1zy4_A Serine/threonine-protei 100.0 5.7E-40 2E-44 369.8 26.8 288 351-669 2-293 (303)
94 2fst_X Mitogen-activated prote 100.0 1E-40 3.6E-45 389.7 21.3 262 353-667 27-319 (367)
95 1ua2_A CAK, cell division prot 100.0 2E-40 6.7E-45 383.7 23.4 259 353-666 8-298 (346)
96 4aaa_A Cyclin-dependent kinase 100.0 1.5E-40 5.1E-45 381.9 21.6 260 353-667 23-314 (331)
97 3dbq_A Dual specificity protei 100.0 2.5E-40 8.7E-45 382.3 23.6 259 354-667 8-281 (343)
98 3nyv_A Calmodulin-domain prote 100.0 1.6E-40 5.5E-45 402.0 23.0 258 351-666 22-288 (484)
99 3fme_A Dual specificity mitoge 100.0 1.8E-40 6.1E-45 372.5 21.5 257 354-666 6-273 (290)
100 2c30_A Serine/threonine-protei 100.0 7.3E-40 2.5E-44 375.2 26.8 252 356-666 46-301 (321)
101 2yex_A Serine/threonine-protei 100.0 2.7E-40 9.2E-45 368.3 22.2 261 353-667 5-269 (276)
102 2zmd_A Dual specificity protei 100.0 3.6E-40 1.2E-44 388.3 24.4 258 355-667 56-328 (390)
103 3kvw_A DYRK2, dual specificity 100.0 7.8E-40 2.7E-44 390.3 27.5 258 348-667 90-416 (429)
104 3f3z_A Calcium/calmodulin-depe 100.0 5E-40 1.7E-44 366.9 24.1 254 352-665 6-267 (277)
105 2y94_A 5'-AMP-activated protei 100.0 1.7E-40 5.9E-45 400.2 21.8 257 351-666 12-273 (476)
106 3ork_A Serine/threonine protei 100.0 1.9E-40 6.5E-45 377.7 20.6 265 350-663 7-277 (311)
107 4exu_A Mitogen-activated prote 100.0 5.7E-40 2E-44 383.7 25.2 261 353-667 40-331 (371)
108 3qyz_A Mitogen-activated prote 100.0 7E-40 2.4E-44 381.7 25.9 263 355-666 27-320 (364)
109 1phk_A Phosphorylase kinase; g 100.0 1.6E-39 5.6E-44 366.5 28.0 264 351-670 13-294 (298)
110 1u5q_A Serine/threonine protei 100.0 5.2E-40 1.8E-44 381.0 24.6 252 355-666 54-312 (348)
111 3kn6_A Ribosomal protein S6 ki 100.0 2E-40 6.8E-45 380.6 20.8 255 351-666 4-277 (325)
112 3fdn_A Serine/threonine-protei 100.0 3.8E-40 1.3E-44 368.6 22.5 253 352-665 6-263 (279)
113 2ac3_A MAP kinase-interacting 100.0 4.9E-40 1.7E-44 374.2 23.6 268 350-667 7-303 (316)
114 2qr7_A Ribosomal protein S6 ki 100.0 2.2E-40 7.7E-45 383.2 20.8 253 351-665 18-283 (342)
115 1evl_A Threonyl-tRNA synthetas 100.0 7.5E-40 2.6E-44 386.4 24.9 355 711-1162 15-394 (401)
116 1j1b_A Glycogen synthase kinas 100.0 6E-40 2E-44 390.2 23.9 257 354-666 53-343 (420)
117 3dls_A PAS domain-containing s 100.0 2.1E-40 7.3E-45 382.1 19.2 251 351-666 20-281 (335)
118 3eb0_A Putative uncharacterize 100.0 1.2E-39 4.1E-44 382.5 25.5 284 354-667 6-329 (383)
119 3pfq_A PKC-B, PKC-beta, protei 100.0 6.6E-40 2.3E-44 411.6 24.0 261 352-671 338-609 (674)
120 2acx_A G protein-coupled recep 100.0 5.3E-40 1.8E-44 402.0 22.4 258 354-671 183-456 (576)
121 2b9h_A MAP kinase FUS3, mitoge 100.0 2.8E-39 9.5E-44 373.8 26.9 273 353-667 9-313 (353)
122 3an0_A Dual specificity mitoge 100.0 1.2E-39 4.1E-44 375.4 23.7 256 352-665 48-316 (340)
123 2jam_A Calcium/calmodulin-depe 100.0 1.2E-39 4.2E-44 369.3 23.3 256 351-666 5-268 (304)
124 3hko_A Calcium/calmodulin-depe 100.0 5.7E-40 1.9E-44 378.4 20.9 264 353-667 24-338 (345)
125 2y7j_A Phosphorylase B kinase 100.0 2.4E-39 8.1E-44 377.8 26.3 258 352-665 91-365 (365)
126 3bhy_A Death-associated protei 100.0 1.5E-39 5.3E-44 363.9 23.5 256 354-666 4-272 (283)
127 2x4f_A Myosin light chain kina 100.0 1.6E-39 5.5E-44 380.5 24.7 255 355-668 87-351 (373)
128 3coi_A Mitogen-activated prote 100.0 2E-39 6.8E-44 376.0 25.1 259 354-666 23-312 (353)
129 4e7w_A Glycogen synthase kinas 100.0 1.5E-39 5E-44 383.6 24.2 258 353-667 38-329 (394)
130 3p86_A Serine/threonine-protei 100.0 3.1E-39 1.1E-43 368.1 26.0 248 354-660 36-292 (309)
131 1nxk_A MAP kinase-activated pr 100.0 1.2E-39 4.1E-44 385.1 23.2 256 350-665 56-327 (400)
132 2i6l_A Mitogen-activated prote 100.0 1.7E-39 5.9E-44 369.1 23.6 278 350-668 6-314 (320)
133 1wak_A Serine/threonine-protei 100.0 1.5E-39 5.2E-44 381.4 23.8 257 351-665 33-397 (397)
134 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.3E-39 4.6E-44 397.3 24.1 260 353-671 183-460 (543)
135 2w5a_A Serine/threonine-protei 100.0 2.2E-39 7.5E-44 361.9 23.3 257 354-666 5-274 (279)
136 3i6u_A CDS1, serine/threonine- 100.0 5.4E-40 1.8E-44 390.5 19.4 259 352-667 132-407 (419)
137 4eqm_A Protein kinase; transfe 100.0 3.4E-39 1.1E-43 364.8 24.9 254 352-660 8-268 (294)
138 3eqc_A Dual specificity mitoge 100.0 1.6E-39 5.3E-44 377.7 22.7 255 354-667 32-332 (360)
139 2vgo_A Serine/threonine-protei 100.0 1.9E-39 6.4E-44 363.9 22.5 252 353-665 12-268 (284)
140 2j7t_A Serine/threonine-protei 100.0 4.7E-39 1.6E-43 363.4 25.9 259 353-668 17-284 (302)
141 3lm5_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 373.5 21.9 262 351-669 24-297 (327)
142 3cok_A Serine/threonine-protei 100.0 1.1E-39 3.8E-44 364.3 20.1 256 353-667 9-270 (278)
143 3e3p_A Protein kinase, putativ 100.0 1.6E-39 5.5E-44 376.8 22.1 265 351-667 19-322 (360)
144 1blx_A Cyclin-dependent kinase 100.0 5.8E-39 2E-43 366.7 26.1 263 353-667 9-304 (326)
145 2h6d_A 5'-AMP-activated protei 100.0 2.2E-39 7.5E-44 361.3 21.5 255 353-666 9-268 (276)
146 3rgf_A Cyclin-dependent kinase 100.0 1.3E-39 4.3E-44 385.2 20.2 260 354-667 19-341 (405)
147 1z57_A Dual specificity protei 100.0 4.8E-39 1.6E-43 368.2 24.1 254 352-667 11-336 (339)
148 3nsz_A CK II alpha, casein kin 100.0 2.6E-39 9E-44 370.5 21.7 254 353-668 34-328 (330)
149 2vx3_A Dual specificity tyrosi 100.0 6E-39 2.1E-43 376.4 25.3 256 350-667 49-380 (382)
150 2owb_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 370.9 22.9 256 352-666 38-298 (335)
151 2rku_A Serine/threonine-protei 100.0 5.9E-39 2E-43 361.7 23.6 255 352-665 12-271 (294)
152 3pg1_A Mitogen-activated prote 100.0 5.4E-39 1.8E-43 373.2 23.8 262 354-667 21-324 (362)
153 3byv_A Rhoptry kinase; malaria 100.0 1E-40 3.4E-45 390.8 9.1 272 354-668 72-368 (377)
154 2ycf_A Serine/threonine-protei 100.0 1.5E-39 5E-44 372.0 18.5 261 351-668 6-283 (322)
155 1vzo_A Ribosomal protein S6 ki 100.0 3.7E-39 1.3E-43 374.7 21.5 262 353-671 52-333 (355)
156 2wei_A Calmodulin-domain prote 100.0 6.3E-39 2.1E-43 360.5 22.4 259 350-666 17-283 (287)
157 3com_A Serine/threonine-protei 100.0 1.9E-38 6.6E-43 360.7 26.4 255 353-667 27-286 (314)
158 3q60_A ROP5B; pseudokinase, tr 100.0 5.4E-40 1.8E-44 383.7 13.4 282 355-670 62-363 (371)
159 4euu_A Serine/threonine-protei 100.0 7.7E-39 2.6E-43 365.6 22.6 254 353-661 7-304 (319)
160 2i4l_A Proline-tRNA ligase; al 100.0 2.7E-41 9.4E-46 404.2 2.4 372 713-1155 54-457 (458)
161 2eu9_A Dual specificity protei 100.0 1.3E-38 4.5E-43 367.3 24.6 258 350-669 14-343 (355)
162 3kul_A Ephrin type-A receptor 100.0 1.3E-38 4.3E-43 365.6 24.2 253 352-660 46-307 (325)
163 3a7i_A MST3 kinase, serine/thr 100.0 2.5E-38 8.7E-43 358.1 25.5 253 353-665 20-276 (303)
164 3s95_A LIMK-1, LIM domain kina 100.0 3.3E-39 1.1E-43 366.8 18.2 257 354-659 9-275 (310)
165 3vhe_A Vascular endothelial gr 100.0 7E-39 2.4E-43 371.4 21.2 252 354-660 21-349 (359)
166 2wtk_C Serine/threonine-protei 100.0 6.1E-39 2.1E-43 363.0 20.1 261 353-667 3-271 (305)
167 3ugc_A Tyrosine-protein kinase 100.0 1.5E-38 5.1E-43 358.6 22.7 255 352-660 7-285 (295)
168 2psq_A Fibroblast growth facto 100.0 1.8E-38 6.2E-43 371.1 24.1 250 354-660 80-358 (370)
169 2vwi_A Serine/threonine-protei 100.0 3.1E-39 1E-43 364.5 16.8 267 351-668 11-296 (303)
170 2x7f_A TRAF2 and NCK-interacti 100.0 3.4E-38 1.2E-42 360.6 25.7 263 353-668 22-295 (326)
171 2pml_X PFPK7, Ser/Thr protein 100.0 5.2E-39 1.8E-43 370.8 18.8 265 351-674 27-337 (348)
172 3l9p_A Anaplastic lymphoma kin 100.0 1.3E-38 4.5E-43 371.8 22.2 251 354-661 70-340 (367)
173 3cek_A Dual specificity protei 100.0 2.2E-38 7.6E-43 360.5 23.2 259 354-667 27-300 (313)
174 2dyl_A Dual specificity mitoge 100.0 2.9E-38 9.8E-43 359.4 23.7 257 354-666 24-290 (318)
175 3lb7_A RAF proto-oncogene seri 100.0 3.9E-38 1.3E-42 358.5 24.5 251 354-661 35-295 (307)
176 4hcu_A Tyrosine-protein kinase 100.0 4.4E-38 1.5E-42 349.9 24.3 246 354-660 9-260 (269)
177 1q8y_A SR protein kinase; tran 100.0 1.8E-38 6.2E-43 369.6 21.7 256 354-667 18-341 (373)
178 2izr_A Casein kinase I isoform 100.0 2.6E-38 8.8E-43 363.2 22.5 254 353-659 7-274 (330)
179 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.8E-38 1.6E-42 349.2 23.5 246 354-660 7-258 (268)
180 1luf_A Muscle-specific tyrosin 100.0 4.3E-38 1.5E-42 362.1 23.9 250 354-660 46-329 (343)
181 3kmu_A ILK, integrin-linked ki 100.0 4.6E-38 1.6E-42 348.7 23.1 248 352-660 7-264 (271)
182 2clq_A Mitogen-activated prote 100.0 5.1E-38 1.8E-42 353.4 23.7 257 354-667 21-286 (295)
183 3qup_A Tyrosine-protein kinase 100.0 2.1E-38 7.2E-43 362.1 20.8 264 354-667 22-306 (323)
184 1csn_A Casein kinase-1; phosph 100.0 1.3E-37 4.6E-42 350.5 27.0 256 352-660 7-277 (298)
185 3gen_A Tyrosine-protein kinase 100.0 1E-37 3.4E-42 349.4 25.8 246 354-660 23-274 (283)
186 3cbl_A C-FES, proto-oncogene t 100.0 1.8E-38 6.3E-43 371.9 19.8 250 354-660 113-368 (377)
187 3aln_A Dual specificity mitoge 100.0 2.5E-38 8.7E-43 362.3 19.9 256 354-667 21-293 (327)
188 4e5w_A Tyrosine-protein kinase 100.0 9.6E-38 3.3E-42 352.7 24.3 254 354-660 20-296 (302)
189 4fvq_A Tyrosine-protein kinase 100.0 2.8E-38 9.7E-43 354.7 19.3 243 354-660 7-269 (289)
190 1mp8_A Focal adhesion kinase 1 100.0 4.5E-38 1.5E-42 352.4 20.8 248 354-660 14-270 (281)
191 3op5_A Serine/threonine-protei 100.0 5.4E-38 1.8E-42 365.8 22.1 261 354-659 34-322 (364)
192 2h34_A Serine/threonine-protei 100.0 1.2E-37 4E-42 354.6 24.3 255 350-660 29-290 (309)
193 4f0f_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 349.8 23.4 248 353-660 17-283 (287)
194 2iwi_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42 358.8 19.0 253 350-668 26-292 (312)
195 2ivs_A Proto-oncogene tyrosine 100.0 6.5E-38 2.2E-42 355.8 21.2 250 354-660 22-305 (314)
196 3a99_A Proto-oncogene serine/t 100.0 3.8E-38 1.3E-42 360.5 19.4 253 351-669 39-303 (320)
197 3poz_A Epidermal growth factor 100.0 6.2E-38 2.1E-42 359.8 21.2 250 353-660 13-272 (327)
198 3dtc_A Mitogen-activated prote 100.0 1.8E-37 6.1E-42 344.9 23.2 245 354-660 6-267 (271)
199 2a19_B Interferon-induced, dou 100.0 1.1E-37 3.9E-42 348.3 21.4 260 351-661 7-269 (284)
200 1rjb_A FL cytokine receptor; k 100.0 1E-37 3.4E-42 359.7 21.5 251 354-660 44-328 (344)
201 3tt0_A Basic fibroblast growth 100.0 3.4E-37 1.2E-41 361.6 26.4 250 354-660 68-346 (382)
202 1xbb_A Tyrosine-protein kinase 100.0 1.6E-37 5.6E-42 349.6 21.8 250 355-660 16-273 (291)
203 2wqm_A Serine/threonine-protei 100.0 5.1E-37 1.7E-41 348.6 26.0 252 352-660 29-291 (310)
204 1t46_A HOMO sapiens V-KIT hard 100.0 1.8E-37 6.2E-42 352.0 22.3 251 354-660 22-301 (313)
205 2xir_A Vascular endothelial gr 100.0 1.1E-37 3.8E-42 354.2 20.1 252 354-660 26-304 (316)
206 3kex_A Receptor tyrosine-prote 100.0 7.4E-38 2.5E-42 358.8 18.5 249 354-660 12-270 (325)
207 3og7_A AKAP9-BRAF fusion prote 100.0 3.1E-37 1.1E-41 347.2 22.9 251 353-660 22-282 (289)
208 1k9a_A Carboxyl-terminal SRC k 100.0 2.8E-37 9.7E-42 370.4 23.9 241 354-660 192-439 (450)
209 1qcf_A Haematopoetic cell kina 100.0 5.1E-37 1.7E-41 368.6 26.1 244 354-659 187-437 (454)
210 3fhr_A MAP kinase-activated pr 100.0 1.6E-37 5.6E-42 358.0 20.8 256 350-666 23-294 (336)
211 2qol_A Ephrin receptor; recept 100.0 1.5E-37 5.2E-42 363.7 20.8 253 352-660 42-303 (373)
212 1p4o_A Insulin-like growth fac 100.0 3.2E-37 1.1E-41 352.0 22.9 250 354-660 24-293 (322)
213 3p23_A Serine/threonine-protei 100.0 1.6E-37 5.6E-42 370.4 21.4 256 355-668 24-292 (432)
214 2eva_A TAK1 kinase - TAB1 chim 100.0 3.2E-37 1.1E-41 350.8 22.6 240 354-660 7-257 (307)
215 2v62_A Serine/threonine-protei 100.0 2.4E-37 8E-42 357.7 21.9 262 354-660 36-322 (345)
216 3uzp_A CKI-delta, CKID, casein 100.0 6.8E-37 2.3E-41 344.4 24.8 256 353-660 7-274 (296)
217 3kfa_A Tyrosine-protein kinase 100.0 2.5E-37 8.7E-42 346.8 21.1 247 354-660 12-265 (288)
218 3t9t_A Tyrosine-protein kinase 100.0 6.1E-37 2.1E-41 339.5 23.9 246 354-660 7-258 (267)
219 3soc_A Activin receptor type-2 100.0 1.4E-37 4.7E-42 356.2 19.2 252 354-660 23-312 (322)
220 3q4u_A Activin receptor type-1 100.0 4E-37 1.4E-41 347.1 22.6 253 353-660 6-296 (301)
221 3lxl_A Tyrosine-protein kinase 100.0 3.1E-37 1.1E-41 353.5 21.9 254 353-660 21-297 (327)
222 1hc7_A Prolyl-tRNA synthetase; 100.0 3.5E-37 1.2E-41 368.6 23.2 328 714-1165 32-391 (477)
223 3brb_A Proto-oncogene tyrosine 100.0 3.8E-37 1.3E-41 350.1 22.4 256 354-660 33-302 (313)
224 2i1m_A Macrophage colony-stimu 100.0 3.6E-37 1.2E-41 353.4 22.2 251 354-660 45-320 (333)
225 1fvr_A Tyrosine-protein kinase 100.0 6.6E-37 2.2E-41 350.8 23.9 249 352-660 22-294 (327)
226 3pls_A Macrophage-stimulating 100.0 7.3E-37 2.5E-41 344.5 23.9 253 355-660 21-281 (298)
227 4hgt_A Casein kinase I isoform 100.0 6.3E-37 2.2E-41 344.4 23.1 256 353-660 7-274 (296)
228 2jii_A Serine/threonine-protei 100.0 6.9E-37 2.4E-41 354.6 23.9 267 354-660 41-330 (352)
229 1mqb_A Ephrin type-A receptor 100.0 1.4E-36 4.9E-41 349.5 26.3 253 352-660 41-303 (333)
230 3ll6_A Cyclin G-associated kin 100.0 5.6E-37 1.9E-41 351.0 22.8 264 355-660 28-302 (337)
231 2pvf_A Fibroblast growth facto 100.0 7.3E-37 2.5E-41 351.7 23.2 250 354-660 34-312 (334)
232 2yfx_A Tyrosine-protein kinase 100.0 4.7E-37 1.6E-41 352.0 21.4 253 353-662 28-300 (327)
233 3cc6_A Protein tyrosine kinase 100.0 4.4E-37 1.5E-41 344.1 20.7 248 354-660 11-267 (281)
234 2buj_A Serine/threonine-protei 100.0 6.3E-37 2.2E-41 348.7 22.2 262 354-660 28-300 (317)
235 3f66_A Hepatocyte growth facto 100.0 7.1E-37 2.4E-41 345.2 22.1 252 355-660 25-285 (298)
236 3lzb_A Epidermal growth factor 100.0 4.7E-37 1.6E-41 352.8 20.8 250 353-660 13-272 (327)
237 1u59_A Tyrosine-protein kinase 100.0 1.1E-36 3.6E-41 342.3 23.0 249 355-660 9-266 (287)
238 1opk_A P150, C-ABL, proto-onco 100.0 3.4E-37 1.2E-41 374.1 20.3 247 354-660 219-472 (495)
239 1qpc_A LCK kinase; alpha beta 100.0 1.2E-36 4.2E-41 339.9 22.6 245 354-660 12-263 (279)
240 1byg_A CSK, protein (C-termina 100.0 6.8E-37 2.3E-41 342.0 20.2 241 354-660 20-267 (278)
241 3lxp_A Non-receptor tyrosine-p 100.0 1.3E-36 4.4E-41 347.3 22.5 253 355-660 30-304 (318)
242 2rio_A Serine/threonine-protei 100.0 9.4E-37 3.2E-41 364.2 22.0 254 355-667 15-303 (434)
243 3c1x_A Hepatocyte growth facto 100.0 5.5E-37 1.9E-41 359.0 19.1 252 355-660 89-349 (373)
244 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.6E-36 5.3E-41 364.2 22.6 245 354-660 183-434 (452)
245 4fl3_A Tyrosine-protein kinase 100.0 1.6E-36 5.4E-41 378.4 23.1 244 361-660 375-625 (635)
246 2qkw_B Protein kinase; three-h 100.0 1.7E-37 5.7E-42 354.8 12.9 252 352-660 36-309 (321)
247 4eut_A Serine/threonine-protei 100.0 5E-37 1.7E-41 362.0 17.4 253 353-660 7-303 (396)
248 1u46_A ACK-1, activated CDC42 100.0 1.1E-36 3.9E-41 341.7 17.9 253 353-660 16-278 (291)
249 2w1i_A JAK2; chromosomal rearr 100.0 3.1E-36 1.1E-40 345.2 21.6 253 354-660 40-316 (326)
250 3uim_A Brassinosteroid insensi 100.0 1.7E-37 5.7E-42 355.1 9.5 251 354-661 29-306 (326)
251 3g2f_A Bone morphogenetic prot 100.0 3.8E-36 1.3E-40 345.1 20.7 259 352-660 10-312 (336)
252 2ozo_A Tyrosine-protein kinase 100.0 6.1E-36 2.1E-40 372.1 23.8 249 355-660 335-592 (613)
253 2h8h_A Proto-oncogene tyrosine 100.0 5.9E-36 2E-40 366.6 23.3 245 354-660 266-517 (535)
254 3mdy_A Bone morphogenetic prot 100.0 5E-36 1.7E-40 343.7 21.2 255 350-660 32-325 (337)
255 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.3E-36 4.3E-41 346.3 15.7 253 353-660 31-296 (319)
256 1nj8_A Proline-tRNA synthetase 100.0 6.4E-36 2.2E-40 356.8 22.4 335 706-1165 18-385 (459)
257 3a32_A Probable threonyl-tRNA 100.0 4.6E-37 1.6E-41 368.9 11.4 367 714-1166 37-453 (471)
258 2nru_A Interleukin-1 receptor- 100.0 9.3E-36 3.2E-40 337.5 19.5 246 358-660 34-300 (307)
259 3sv0_A Casein kinase I-like; t 100.0 2.4E-35 8.2E-40 355.9 23.6 255 353-659 5-271 (483)
260 3e7e_A HBUB1, BUB1A, mitotic c 100.0 9.4E-36 3.2E-40 346.9 18.6 241 354-660 64-332 (365)
261 3m2w_A MAP kinase-activated pr 100.0 4.6E-35 1.6E-39 331.3 21.8 240 347-667 9-264 (299)
262 2j0j_A Focal adhesion kinase 1 100.0 3.4E-35 1.2E-39 367.7 22.0 248 354-660 389-645 (656)
263 1b6c_B TGF-B superfamily recep 100.0 5.5E-35 1.9E-39 336.1 21.8 254 352-660 39-330 (342)
264 1nyr_A Threonyl-tRNA synthetas 100.0 3E-36 1E-40 375.1 12.1 354 715-1161 260-641 (645)
265 2vuw_A Serine/threonine-protei 100.0 2.5E-36 8.4E-41 347.6 8.5 269 354-664 19-336 (336)
266 1qf6_A THRRS, threonyl-tRNA sy 100.0 1.9E-34 6.4E-39 357.1 24.7 355 713-1162 258-635 (642)
267 3qa8_A MGC80376 protein; kinas 100.0 5.5E-36 1.9E-40 370.2 10.5 263 352-666 11-304 (676)
268 3gxj_A TGF-beta receptor type- 100.0 2.4E-36 8.2E-41 340.8 6.5 251 355-660 3-291 (303)
269 3dzo_A Rhoptry kinase domain; 100.0 1.1E-35 3.8E-40 352.7 12.0 266 355-669 78-373 (413)
270 3uh0_A Threonyl-tRNA synthetas 100.0 5.3E-34 1.8E-38 339.4 25.1 351 712-1162 50-459 (460)
271 1nj1_A PROR, proline-tRNA synt 100.0 5.1E-34 1.7E-38 343.3 21.8 332 709-1165 54-418 (501)
272 2pzi_A Probable serine/threoni 100.0 1.8E-34 6.2E-39 363.6 17.1 244 352-663 77-324 (681)
273 3uqc_A Probable conserved tran 100.0 1.5E-33 5.3E-38 317.6 18.9 222 353-660 29-259 (286)
274 2zt5_A Glycyl-tRNA synthetase; 100.0 5.4E-31 1.8E-35 326.1 19.4 391 714-1161 89-658 (693)
275 1ati_A Glycyl-tRNA synthetase; 100.0 2.4E-29 8.1E-34 303.0 18.1 345 714-1160 27-504 (505)
276 4hvc_A Bifunctional glutamate/ 100.0 4.6E-28 1.6E-32 290.0 23.5 328 713-1165 48-418 (519)
277 4azs_A Methyltransferase WBDD; 100.0 1.8E-28 6.1E-33 301.8 13.9 187 359-605 238-434 (569)
278 3ial_A Prolyl-tRNA synthetase; 99.9 4.4E-26 1.5E-30 272.1 25.3 335 707-1165 36-427 (518)
279 3en9_A Glycoprotease, O-sialog 99.9 1.8E-23 6.1E-28 255.9 8.0 185 359-603 340-532 (540)
280 1zar_A RIO2 kinase; serine kin 99.8 1.1E-21 3.8E-26 220.4 9.1 133 356-541 91-240 (282)
281 3ikl_A DNA polymerase subunit 99.8 8.6E-19 2.9E-23 205.0 24.6 310 716-1162 93-450 (459)
282 1g5h_A Mitochondrial DNA polym 99.8 2.5E-20 8.6E-25 221.0 10.9 126 1036-1161 290-439 (454)
283 1zth_A RIO1 serine protein kin 99.8 1.7E-18 5.8E-23 191.8 12.5 138 357-543 49-219 (258)
284 4gyi_A RIO2 kinase; protein ki 99.6 4.7E-15 1.6E-19 171.9 10.2 134 357-541 97-263 (397)
285 2dq3_A Seryl-tRNA synthetase; 99.5 1.5E-14 5.2E-19 170.2 10.8 143 715-862 161-324 (425)
286 1nnh_A Asparaginyl-tRNA synthe 99.4 8.4E-14 2.9E-18 156.4 8.4 120 722-851 11-141 (294)
287 2dq0_A Seryl-tRNA synthetase; 99.4 5.3E-13 1.8E-17 157.9 11.0 144 714-862 181-344 (455)
288 1ses_A Seryl-tRNA synthetase; 99.4 8.5E-13 2.9E-17 155.0 10.4 143 715-862 155-320 (421)
289 3dsq_A Pyrrolysyl-tRNA synthet 99.3 1.7E-12 5.9E-17 145.1 9.5 130 729-859 73-210 (288)
290 2ebm_A RWD domain-containing p 99.3 6.6E-13 2.2E-17 130.9 5.3 75 5-81 52-126 (128)
291 2cja_A Seryl-tRNA synthetase; 99.3 1.6E-12 5.5E-17 155.2 7.1 139 714-853 219-407 (522)
292 2day_A Ring finger protein 25; 99.3 2.7E-12 9.2E-17 126.5 6.1 68 7-76 58-125 (128)
293 2yz0_A Serine/threonine-protei 99.3 3.6E-12 1.2E-16 127.3 6.6 68 7-76 61-128 (138)
294 1ukx_A GCN2, GCN2 EIF2alpha ki 99.2 4.6E-12 1.6E-16 126.3 5.6 72 7-80 62-133 (137)
295 2ebk_A RWD domain-containing p 99.2 4E-12 1.4E-16 125.2 4.3 72 6-80 54-125 (128)
296 3vbb_A Seryl-tRNA synthetase, 99.1 1.1E-10 3.8E-15 138.4 12.1 143 715-859 190-362 (522)
297 3qtc_A Pyrrolysyl-tRNA synthet 99.1 2.7E-10 9.3E-15 127.9 13.6 122 729-858 79-212 (290)
298 1wle_A Seryl-tRNA synthetase; 99.1 3E-10 1E-14 135.2 11.2 142 715-858 208-371 (501)
299 3tm0_A Aminoglycoside 3'-phosp 99.0 7.8E-10 2.7E-14 121.7 11.5 141 352-541 11-212 (263)
300 3lss_A Seryl-tRNA synthetase; 99.0 6.4E-10 2.2E-14 131.2 11.1 142 715-859 197-360 (484)
301 1v95_A Nuclear receptor coacti 99.0 1.2E-09 4.1E-14 105.9 10.9 101 1061-1162 5-108 (130)
302 2dax_A Protein C21ORF6; RWD do 98.9 8.4E-10 2.9E-14 111.9 7.4 73 7-82 72-145 (152)
303 3qne_A Seryl-tRNA synthetase, 98.9 1.5E-09 5.1E-14 127.9 10.5 142 715-859 174-337 (485)
304 2daw_A RWD domain containing p 98.9 1.2E-09 4E-14 110.9 5.7 73 8-83 75-148 (154)
305 3err_A Fusion protein of micro 98.9 4.8E-09 1.6E-13 126.2 11.9 140 715-859 264-425 (536)
306 1nd4_A Aminoglycoside 3'-phosp 98.9 7.4E-09 2.5E-13 113.0 12.1 136 353-542 18-214 (264)
307 1x54_A Asparaginyl-tRNA synthe 98.7 2.4E-08 8.3E-13 117.7 11.0 114 724-850 133-250 (434)
308 3dxp_A Putative acyl-COA dehyd 98.7 2.4E-08 8.2E-13 115.3 10.8 142 359-542 42-248 (359)
309 1wyd_A Hypothetical aspartyl-t 98.7 4.9E-08 1.7E-12 114.8 10.8 114 724-850 132-249 (429)
310 1n9w_A Aspartyl-tRNA synthetas 98.6 2.8E-08 9.7E-13 116.6 6.4 115 724-850 123-241 (422)
311 1eov_A ASPRS, aspartyl-tRNA sy 98.4 5.6E-07 1.9E-11 107.5 11.7 114 724-849 176-294 (487)
312 3mf2_A BLL0957 protein; aminoa 98.4 4.4E-07 1.5E-11 101.8 9.6 144 715-861 53-233 (346)
313 3sg8_A APH(2'')-ID; antibiotic 98.3 5.7E-07 1.9E-11 101.3 8.0 134 361-542 26-223 (304)
314 3a74_A Lysyl-tRNA synthetase; 98.2 7.2E-06 2.5E-10 97.9 13.0 115 725-850 173-291 (493)
315 3r70_A Aminoglycoside phosphot 98.2 6.2E-06 2.1E-10 93.6 12.0 130 358-542 40-237 (320)
316 3tdw_A Gentamicin resistance p 97.9 9.5E-05 3.2E-09 83.3 15.3 133 360-542 24-224 (306)
317 1e1o_A Lysyl-tRNA synthetase, 97.9 5.1E-05 1.8E-09 90.7 13.2 115 725-850 182-300 (504)
318 1b7y_A Phers, protein (phenyla 97.9 9.3E-05 3.2E-09 84.4 14.6 121 729-852 103-247 (350)
319 3l4g_A Phenylalanyl-tRNA synth 97.9 5.7E-05 1.9E-09 89.5 12.8 129 728-859 226-406 (508)
320 4gkh_A Aminoglycoside 3'-phosp 97.9 0.00013 4.6E-09 79.9 14.7 133 361-542 30-223 (272)
321 2olc_A MTR kinase, methylthior 97.8 6.6E-05 2.3E-09 87.6 11.6 61 360-420 35-103 (397)
322 3ovc_A Hygromycin-B 4-O-kinase 97.7 0.00018 6.1E-09 83.1 12.3 56 358-422 44-101 (362)
323 3a5y_A GENX, putative lysyl-tR 97.7 0.00027 9.3E-09 80.6 13.5 119 724-850 34-158 (345)
324 3d1u_A Putative fructosamine-3 97.6 0.00025 8.5E-09 79.3 12.5 61 358-421 18-81 (288)
325 2du3_A O-phosphoseryl-tRNA syn 97.6 7.4E-05 2.5E-09 89.0 8.1 76 776-853 180-260 (534)
326 2xgt_A Asparaginyl-tRNA synthe 97.5 0.00049 1.7E-08 81.1 12.4 112 724-849 130-246 (435)
327 3nem_A Aspartyl-tRNA synthetas 97.4 0.00051 1.7E-08 80.8 11.3 115 725-848 136-252 (438)
328 2du7_A O-phosphoseryl-tRNA syn 97.4 0.00038 1.3E-08 82.8 9.7 76 775-852 191-271 (549)
329 2q83_A YTAA protein; 2635576, 97.3 0.0016 5.4E-08 73.6 13.6 30 512-541 222-251 (346)
330 3ats_A Putative uncharacterize 97.2 0.00056 1.9E-08 78.3 9.3 66 358-423 23-99 (357)
331 1c0a_A Aspartyl tRNA synthetas 97.2 0.0014 4.7E-08 80.0 12.7 99 725-831 137-240 (585)
332 1l0w_A Aspartyl-tRNA synthetas 97.2 0.0016 5.4E-08 79.3 12.8 99 725-831 143-246 (580)
333 2yle_A Protein spire homolog 1 97.1 0.004 1.4E-07 65.8 13.5 134 479-659 34-194 (229)
334 2rhq_A Phenylalanyl-tRNA synth 97.0 0.0031 1.1E-07 70.5 11.7 118 729-852 55-186 (294)
335 3m4p_A Ehasnrs, asparaginyl-tR 96.9 0.002 7E-08 76.1 10.3 113 725-849 155-270 (456)
336 2pyw_A Uncharacterized protein 96.9 0.0044 1.5E-07 72.8 12.8 32 510-542 230-261 (420)
337 4ex5_A Lysine--tRNA ligase; st 96.8 0.0068 2.3E-07 72.6 13.6 100 725-831 203-306 (529)
338 3pco_A Phenylalanyl-tRNA synth 96.8 0.002 6.8E-08 72.6 8.5 96 729-829 109-215 (327)
339 3bju_A Lysyl-tRNA synthetase; 96.8 0.0071 2.4E-07 72.7 13.7 100 725-831 175-278 (521)
340 2odr_B Phosphoseryl-tRNA synth 96.8 0.0063 2.1E-07 73.0 12.6 76 776-853 199-279 (648)
341 2odr_A Phosphoseryl-tRNA synth 96.8 0.0064 2.2E-07 73.0 12.6 76 776-853 199-279 (665)
342 2odr_D Phosphoseryl-tRNA synth 96.8 0.0065 2.2E-07 73.1 12.6 76 776-853 199-279 (685)
343 2odr_C Phosphoseryl-tRNA synth 96.7 0.007 2.4E-07 72.9 12.5 76 776-853 199-279 (701)
344 3ig2_A Phenylalanyl-tRNA synth 96.7 0.0078 2.7E-07 64.0 11.8 125 729-853 6-154 (213)
345 4ah6_A Aspartate--tRNA ligase, 96.7 0.011 3.9E-07 71.8 13.9 114 725-850 147-265 (617)
346 3ica_A Phenylalanyl-tRNA synth 96.5 0.014 4.9E-07 61.9 12.3 125 729-853 6-154 (213)
347 3i7f_A Aspartyl-tRNA synthetas 96.3 0.011 3.6E-07 71.1 10.3 97 724-828 242-342 (548)
348 3dxq_A Choline/ethanolamine ki 96.2 0.02 6.9E-07 63.7 11.9 29 513-542 174-202 (301)
349 3l4g_B Phenylalanyl-tRNA synth 96.0 0.024 8.3E-07 69.3 11.6 102 730-831 394-505 (589)
350 3jr1_A Putative fructosamine-3 96.0 0.037 1.3E-06 62.3 12.3 58 359-423 40-100 (312)
351 3f7w_A Putative fructosamine-3 95.8 0.092 3.1E-06 57.9 14.5 54 356-412 16-69 (288)
352 3csv_A Aminoglycoside phosphot 95.8 0.022 7.4E-07 64.4 9.4 31 512-542 183-217 (333)
353 2ppq_A HSK, HK, homoserine kin 95.6 0.025 8.5E-07 63.4 8.8 50 358-413 25-74 (322)
354 1zyl_A Hypothetical protein YI 95.4 0.07 2.4E-06 59.8 11.9 48 361-413 32-79 (328)
355 3c5i_A Choline kinase; choline 95.2 0.041 1.4E-06 63.1 9.4 28 513-541 213-240 (369)
356 3feg_A Choline/ethanolamine ki 95.2 0.063 2.2E-06 62.1 10.8 60 361-423 56-123 (379)
357 1nw1_A Choline kinase (49.2 KD 95.0 0.15 5.1E-06 59.9 13.4 61 359-423 77-145 (429)
358 2rhq_B Phenylalanyl-tRNA synth 94.9 0.1 3.5E-06 66.0 12.1 103 729-831 495-604 (795)
359 2qg7_A Ethanolamine kinase PV0 94.3 0.35 1.2E-05 57.3 14.2 62 359-423 112-174 (458)
360 3i1a_A Spectinomycin phosphotr 93.7 0.26 8.8E-06 55.9 11.3 31 512-542 206-236 (339)
361 1b7y_B Phers, protein (phenyla 93.3 0.2 6.9E-06 63.1 10.1 95 729-831 491-593 (785)
362 3f2s_A CK, chetk-alpha, cholin 91.5 0.97 3.3E-05 52.5 12.2 29 513-541 245-279 (401)
363 3cmq_A Phenylalanyl-tRNA synth 90.6 0.92 3.1E-05 52.8 10.8 91 730-827 51-163 (415)
364 3mes_A Choline kinase; malaria 89.1 0.72 2.5E-05 54.0 8.5 29 513-542 263-291 (424)
365 3g15_A CK, chetk-alpha, cholin 85.3 2.2 7.4E-05 49.4 9.6 29 514-542 246-280 (401)
366 3pco_B Phenylalanyl-tRNA synth 83.9 1.9 6.4E-05 54.4 8.6 120 731-852 493-630 (795)
367 3cxl_A N-chimerin; SH2, RHO-GA 74.9 0.19 6.6E-06 59.6 -4.3 61 361-424 148-214 (463)
368 1x54_A Asparaginyl-tRNA synthe 62.7 3.7 0.00013 48.1 3.2 18 1036-1053 397-414 (434)
369 1wyd_A Hypothetical aspartyl-t 61.2 4.2 0.00014 47.5 3.3 18 1036-1053 392-409 (429)
370 3m4p_A Ehasnrs, asparaginyl-tR 51.7 7.5 0.00026 45.7 3.3 56 988-1053 369-436 (456)
371 3kpa_A Probable ubiquitin fold 47.9 12 0.0004 36.7 3.3 27 9-35 86-112 (168)
372 2z6o_A UFM1-conjugating enzyme 44.5 14 0.00047 37.1 3.3 24 9-32 84-107 (172)
373 2a7l_A Hypothetical ubiquitin- 42.5 16 0.00055 35.4 3.5 25 8-32 71-95 (136)
374 1zuo_A Hypothetical protein LO 36.4 19 0.00066 36.8 3.2 24 9-32 90-113 (186)
375 4ano_A ESSB; membrane protein, 34.7 24 0.00082 37.1 3.6 69 466-540 60-131 (219)
376 3m20_A 4-oxalocrotonate tautom 34.6 43 0.0015 27.3 4.5 33 25-60 1-33 (62)
377 2fo3_A Ubiquitin-conjugating e 34.1 25 0.00084 33.5 3.3 25 8-32 53-77 (125)
378 3i7f_A Aspartyl-tRNA synthetas 33.4 17 0.00057 43.7 2.3 56 987-1053 461-528 (548)
379 2h2y_A Ubiquitin-conjugating e 32.9 26 0.00089 33.9 3.3 25 8-32 67-91 (136)
380 1z2u_A Ubiquitin-conjugating e 32.8 25 0.00087 34.5 3.2 25 8-32 51-75 (150)
381 2r0j_A Ubiquitin carrier prote 32.7 26 0.0009 34.4 3.3 25 8-32 48-72 (149)
382 1fxt_A Ubiquitin-conjugating e 32.4 26 0.00089 34.4 3.2 25 8-32 49-73 (149)
383 2awf_A Ubiquitin-conjugating e 32.4 26 0.00089 35.3 3.3 25 8-32 65-89 (172)
384 2c2v_B Ubiquitin-conjugating e 32.4 27 0.00091 34.6 3.3 25 8-32 52-76 (154)
385 2bep_A Ubiquitin-conjugating e 32.3 26 0.00089 34.8 3.2 25 8-32 58-82 (159)
386 2ayv_A Ubiquitin-conjugating e 32.3 26 0.0009 35.1 3.3 25 8-32 68-92 (166)
387 2aak_A UBC1, ubiquitin conjuga 32.2 27 0.00091 34.4 3.3 25 8-32 51-75 (152)
388 1otf_A 4-oxalocrotonate tautom 32.2 41 0.0014 27.0 3.9 34 25-60 1-34 (62)
389 2q0v_A Ubiquitin-conjugating e 31.8 27 0.00094 34.6 3.3 25 8-32 72-96 (156)
390 1jat_B Ubiquitin-conjugating e 31.7 28 0.00096 33.7 3.3 25 8-32 57-81 (138)
391 1zdn_A Ubiquitin-conjugating e 31.7 27 0.00094 34.6 3.3 26 8-33 60-85 (158)
392 1jat_A Ubiquitin-conjugating e 31.4 28 0.00096 34.4 3.3 25 8-32 52-76 (155)
393 2opa_A Probable tautomerase YW 31.3 44 0.0015 26.8 4.0 34 25-60 1-34 (61)
394 2c4o_A Ubiquitin-conjugating e 30.5 30 0.001 34.7 3.3 25 8-32 66-90 (165)
395 3h8k_A Ubiquitin-conjugating e 30.5 29 0.001 34.6 3.3 25 8-32 51-75 (164)
396 2ucz_A UBC7, ubiquitin conjuga 30.3 30 0.001 34.6 3.3 25 8-32 52-76 (165)
397 2onu_A Ubiquitin-conjugating e 29.9 31 0.0011 34.0 3.3 24 8-31 46-69 (152)
398 3ry0_A Putative tautomerase; o 29.5 48 0.0016 27.2 4.0 34 25-60 1-34 (65)
399 2e2c_A Ubiquitin conjugating e 29.5 36 0.0012 33.6 3.7 26 8-33 56-81 (156)
400 1c4z_D UBCH7, ubiquitin conjug 29.1 32 0.0011 33.9 3.3 24 9-32 50-73 (154)
401 1wzv_A Ubiquitin-conjugating e 29.1 32 0.0011 34.0 3.2 25 8-32 51-75 (155)
402 2a4d_A Ubiquitin-conjugating e 29.0 33 0.0011 34.2 3.3 25 8-32 76-100 (160)
403 4gpr_A Ubiquitin-conjugating e 28.8 33 0.0011 33.7 3.2 25 8-32 51-75 (151)
404 1i7k_A Ubiquitin-conjugating e 28.4 33 0.0011 34.8 3.3 26 8-33 77-102 (179)
405 2z5d_A Ubiquitin-conjugating e 28.1 34 0.0012 34.8 3.3 25 8-32 68-92 (179)
406 3m21_A Probable tautomerase HP 28.0 58 0.002 26.9 4.2 34 25-60 1-37 (67)
407 2y9m_A Ubiquitin-conjugating e 27.7 34 0.0011 34.5 3.2 24 8-31 65-88 (172)
408 1yh2_A HSPC150 protein similar 27.6 35 0.0012 34.3 3.2 25 8-32 51-75 (169)
409 3bzh_A Ubiquitin-conjugating e 27.3 35 0.0012 35.1 3.3 25 8-32 95-119 (194)
410 4ann_A ESSB; membrane protein, 27.2 23 0.0008 37.1 1.9 68 467-540 57-126 (215)
411 1ayz_A UBC2, ubiquitin-conjuga 27.0 37 0.0012 34.2 3.3 25 8-32 51-75 (169)
412 1yrv_A Ubiquitin-conjugating l 26.9 32 0.0011 34.6 2.8 25 8-32 70-94 (169)
413 1y8x_A Ubiquitin-conjugating e 26.7 38 0.0013 33.7 3.3 25 8-32 51-75 (160)
414 2grr_A Ubiquitin-conjugating e 26.4 44 0.0015 33.2 3.7 25 8-32 59-83 (161)
415 3rcz_B SUMO-conjugating enzyme 26.3 39 0.0013 33.8 3.3 25 8-32 62-86 (163)
416 3mb2_A 4-oxalocrotonate tautom 26.3 48 0.0016 27.9 3.4 34 25-60 2-35 (72)
417 2x4k_A 4-oxalocrotonate tautom 26.3 60 0.002 25.9 4.0 35 24-60 3-37 (63)
418 2gjd_A Ubiquitin-conjugating e 26.1 43 0.0015 33.2 3.5 25 8-32 56-80 (157)
419 2nvu_C NEDD8-conjugating enzym 26.1 39 0.0013 34.3 3.3 24 9-32 72-95 (180)
420 2f4z_A Tgtwinscan_2721 - E2 do 26.1 38 0.0013 34.8 3.3 25 8-32 92-116 (193)
421 2pwq_A Ubiquitin conjugating e 26.0 38 0.0013 35.5 3.2 29 8-36 70-101 (216)
422 3qc5_X Platelet binding protei 25.9 92 0.0032 34.5 6.3 45 8-55 270-314 (360)
423 3abf_A 4-oxalocrotonate tautom 25.7 49 0.0017 26.7 3.3 33 25-59 2-34 (64)
424 3rz3_A Ubiquitin-conjugating e 25.0 41 0.0014 34.2 3.2 24 9-32 56-79 (183)
425 2f4w_A Ubiquitin-conjugating e 24.3 44 0.0015 34.2 3.3 25 8-32 61-85 (187)
426 3fn1_B NEDD8-conjugating enzym 24.0 40 0.0014 33.7 2.9 24 9-32 62-85 (167)
427 3k9o_A Ubiquitin-conjugating e 23.8 44 0.0015 34.5 3.3 23 9-31 56-78 (201)
428 3o2u_A NEDD8-conjugating enzym 23.8 46 0.0016 34.1 3.3 24 9-32 81-104 (190)
429 1yf9_A Ubiquitin carrier prote 23.5 47 0.0016 33.5 3.3 25 8-32 55-79 (171)
430 4ds2_A Ubiquitin-conjugating e 23.4 50 0.0017 33.0 3.5 25 8-32 69-93 (167)
431 3kuu_A Phosphoribosylaminoimid 22.9 3.1E+02 0.01 27.6 8.9 57 1066-1123 14-74 (174)
432 3ej9_A Alpha-subunit of trans- 22.9 73 0.0025 27.2 4.0 34 25-60 2-35 (76)
433 3trh_A Phosphoribosylaminoimid 22.8 2.6E+02 0.0089 27.9 8.3 58 1065-1123 7-68 (169)
434 1xmp_A PURE, phosphoribosylami 21.6 3.3E+02 0.011 27.2 8.8 57 1066-1123 13-73 (170)
435 3lp6_A Phosphoribosylaminoimid 21.3 2.9E+02 0.0098 27.8 8.4 57 1066-1123 9-69 (174)
436 2hlw_A Ubiquitin-conjugating e 20.9 49 0.0017 33.3 2.8 24 9-32 87-110 (170)
437 1tte_A Ubiquitin-conjugating e 20.4 46 0.0016 34.9 2.5 22 10-31 52-73 (215)
438 3e46_A Ubiquitin-conjugating e 20.3 56 0.0019 35.1 3.2 23 9-31 108-130 (253)
439 4grd_A N5-CAIR mutase, phospho 20.1 5.1E+02 0.017 25.9 9.8 58 1065-1123 13-74 (173)
440 3a5y_A GENX, putative lysyl-tR 20.1 35 0.0012 38.4 1.7 18 1036-1053 312-329 (345)
No 1
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.8e-69 Score=654.99 Aligned_cols=429 Identities=25% Similarity=0.424 Sum_probs=359.0
Q ss_pred cCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCCCcccccceEEEeccCCceeeecCCCCHH
Q 001059 711 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 711 ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
+-+.|+|++||+|.++.++++|++.++++|++|||++|.||+| ++.++..+..++||+|.|++|+.++||||+|+|
T Consensus 66 ~l~~P~G~~D~lP~~~~~~~~ie~~i~~~~~~~Gy~eI~tP~lE~~el~~~~~ge~~~~my~f~D~~g~~l~LRPd~T~~ 145 (517)
T 4g85_A 66 VLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVP 145 (517)
T ss_dssp CCCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHHCC------CSCBBCCTTSCCEEECSCSHHH
T ss_pred eeeCCCCCCccCHHHHHHHHHHHHHHHHHHHHCCCeEEECcccCcHHHhhcccCcCcceeEEEECCCCCEEEeCCcCcHH
Confidence 3478999999999999999999999999999999999999999 444554444678999999999999999999999
Q ss_pred HHHHHHhCCCCceeEEEecCeEEcCCCC---CCCCceeEeEEEEeCCCCc-ccHHHHHHHHHHHHHHcCCCcceEEEeCc
Q 001059 787 FIRWAISNQKSSFKRYEISSVYRRAIGH---SPPNRYLQGDFDIIGGASA-LTEAEVLKVTMDIVTRFFHAESCDIHLNH 862 (1170)
Q Consensus 787 iaR~~~~~~~~P~r~~Y~g~VfR~e~~~---~~~~ef~Q~GvEiiG~~~~-~aDaEvi~la~~~l~~lgi~~~~~i~lg~ 862 (1170)
+||++++|+..|+|+||+|+|||+|+|+ +|.|||+|+|+|+||..++ .+|+|+|.++.++|+.+|+.+ +.++|||
T Consensus 146 ~aR~~~~~~~~p~k~yyig~vfR~Erp~~~~GR~ReF~Q~g~ei~G~~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~in~ 224 (517)
T 4g85_A 146 FARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGD-FLVKVND 224 (517)
T ss_dssp HHHHHHHTTCSCEEEEEEEEEECCCC-------CCEEEEEEEEEESCCCTTHHHHHHHHHHHHHHHHHCCCC-EEEEEEE
T ss_pred HHHHHHhCCCCCceeEEEeceEeccCcccccCccceeeeeceeccCCccchHHHHHHHHHHHHHHHhhcCCc-ccccccc
Confidence 9999999988899999999999999984 4556799999999998765 689999999999999999986 9999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
+++++++++.+|+++++.+.+..+++++| +.++++++++++...+++++.++.+..++ ...|.. +.++.
T Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~ld~ld---------k~~~~~~~~~l~~~~~~~~~~~~~l~~~~-~~~g~~-~~~~~ 293 (517)
T 4g85_A 225 RRILDGMFAICGVSDSKFRTICSSVDKLD---------KVSWEEVKNEMVGEKGLAPEVADRIGDYV-QQHGGV-SLVEQ 293 (517)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHTTT---------TSCHHHHHHHHHHHTCCCHHHHHHHHHHH-HCCBSH-HHHHH
T ss_pred hhhHHHHHHhhcchHHHHHHHHHHHhhhc---------chhHHHHHHHHHhhcCCCHHHHHHHHHHH-HhcCCc-hHHHH
Confidence 99999999999999999999999998887 55678888899988999999999999888 456653 33443
Q ss_pred Hhc--cCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcc--cccccceeccccc
Q 001059 943 LRG--ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPA--TLVEGTLLAVGGR 1013 (1170)
Q Consensus 943 l~~--~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~--~~~~~~~I~~GGR 1013 (1170)
+.. .+..+....++++++ +++.+|+..+|.||++++||++||||+|||++..+.+... .....++||+|||
T Consensus 294 ~~~~~~~~~~~~~~~~l~~l~~l~~~l~~~g~~~~i~~d~~lvrgldYYtG~vFE~~~~~~~~~~~~~~~~~~~i~~GGR 373 (517)
T 4g85_A 294 LLQDPKLSQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGR 373 (517)
T ss_dssp HHHCHHHHTCHHHHHHHHHHHHHHHHHHHHTCGGGEEECTTCCCCTTTCSSEEEEEEEC-------------CCSEEEEE
T ss_pred HHhcccccccHHHHHHHHHHHHHHHHHHhhCCCcceeeccccccCCcccCCeEEEEEECCcccccccCCcccceecCCCc
Confidence 332 123455566666666 7888999999999999999999999999999987654311 1122358999999
Q ss_pred cchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCC---CCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHH
Q 001059 1014 YDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD---FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE 1090 (1170)
Q Consensus 1014 YD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~---~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~ 1090 (1170)
||+|++.|+. ++.++||||||+|+|||+.+|++. ........+++|+|++.+ +....+|+++++.||+
T Consensus 374 YD~Lv~~f~~--------~G~~~pavGfa~gierl~~~le~~~~~~~~~~~~~~~~V~v~~~~-~~~~~~a~~l~~~Lr~ 444 (517)
T 4g85_A 374 YDGLVGMFDP--------KGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQ-KKLLEERLKLVSELWD 444 (517)
T ss_dssp CHHHHHTTSS--------SCCCCCEEEEEECHHHHHHHHHHHHHHTTCCCCSCCCCEEEEESS-SSCHHHHHHHHHHHHH
T ss_pred hhHHHHHhcc--------CCCCCCcccccchHHHHHHHHHHhccccCccccCCCCEEEEEeCC-HHHHHHHHHHHHHHHH
Confidence 9999998842 234679999999999999988632 222334567899999986 7788999999999999
Q ss_pred cCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 001059 1091 ENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1091 ~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
.|++|++++..++++++++++|++.||+|+||||++|+++|+|+||||.+|+|.+|++++++++|++.++
T Consensus 445 ~Gi~ve~~~~~~~~l~~q~k~A~~~g~~~~viiG~~E~~~g~v~vK~l~tgeq~~v~~~elv~~lk~~l~ 514 (517)
T 4g85_A 445 AGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTG 514 (517)
T ss_dssp TTCCEEECSSSSCCHHHHHHHHHHHCCCEEEEECHHHHHTTEEEEEETTTCCEEEEEHHHHHHHHHHHCC
T ss_pred CCCcEEEEeCCCCCHHHHHHHHHHCCCCEEEEECChhHhCCEEEEEECCCCCeEEeeHHHHHHHHHHHhc
Confidence 9999998876567899999999999999999999999999999999999999999999999999998764
No 2
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP}
Probab=100.00 E-value=1.6e-69 Score=649.20 Aligned_cols=412 Identities=15% Similarity=0.208 Sum_probs=353.6
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCCCcccccc-eEEEecc---C-----------
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRN-TVKLLTH---G----------- 773 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~-my~f~D~---~----------- 773 (1170)
+.|+|++|++|.++.+++++++.++++|++|||++|.||+| .+..+| +..++ ||+|.|+ +
T Consensus 13 ~~p~G~~D~lP~~~~~~~~i~~~l~~~~~~~Gy~~i~tP~~E~~~~~~~~G-~~~ke~m~~~~d~~~~g~~~~~~~~~~~ 91 (465)
T 3net_A 13 STPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKG-NQGDNIIYGLEPILPPNRQAEKDKSGDT 91 (465)
T ss_dssp SCCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHGGG-CC--CBEEEEEEEC--------------
T ss_pred cCCCCccccCHHHHHHHHHHHHHHHHHHHHcCCEEeeccccccHHHHhccC-CCCccceEEEecccccccccccccccCC
Confidence 57899999999999999999999999999999999999999 333335 45678 9999999 3
Q ss_pred -CceeeecCCCCHHHHHHHHhCC---CCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCccc--HHHHHHHHHHH
Q 001059 774 -GDLLELSHELRLPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALT--EAEVLKVTMDI 846 (1170)
Q Consensus 774 -G~~laLRPD~T~~iaR~~~~~~---~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~a--DaEvi~la~~~ 846 (1170)
|+.++||||+|+|+||+++++. ..|+|+||+|+|||+|+||.++ |||+|+|+|+||.+++.+ |+|||.++.++
T Consensus 92 ~g~~l~LRpd~T~~~aR~~~~~~~~~~~p~r~~y~g~vfR~e~~~~gr~Ref~Q~g~ei~G~~~~~a~~DaEvi~l~~~~ 171 (465)
T 3net_A 92 GSEARALKFDQTVPLAAYIARHLNDLTFPFARYQMDVVFRGERAKDGRFRQFRQCDIDVVGREKLSLLYDAQMPAIITEI 171 (465)
T ss_dssp --CCEEECSCSHHHHHHHHHHHGGGSCSSEEEEECCEEECBC------CCEEEEEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCChHHHHHHHHhcccccCCCeEEEEeccEEecCCCCCCCcceeEEeeEEEECCCCccchhhHHHHHHHHHH
Confidence 8999999999999999999864 3699999999999999988655 569999999999999999 99999999999
Q ss_pred HHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHH
Q 001059 847 VTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQ 926 (1170)
Q Consensus 847 l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 926 (1170)
|+.+|+.+ ++|+|||+++++++++.+|++++++..+++++++++ +.++++++.++. +.+++.+.++.+.
T Consensus 172 l~~lgl~~-~~i~in~~~~l~~~l~~~g~~~~~~~~~~~~ld~~~---------~~~~~~~~~~l~-~~~l~~~~~~~l~ 240 (465)
T 3net_A 172 FEAVNIGD-FVIRINNRKVLTGFFQSLNISETQIKSCISIIDNLE---------KIGEAKVKLELE-KEGINPEQTQKII 240 (465)
T ss_dssp HHHHTCSC-EEEEEEEHHHHHHHHHHTTCCHHHHHHHHHHHTTHH---------HHHHHHHHHHHH-HTTCCHHHHHHHH
T ss_pred HHHcCCCc-eEEEECCHHHHHHHHHHcCCCHHHHHHHHHHHHhcc---------ccCHHHHHHHHH-hcCCCHHHHHHHH
Confidence 99999985 999999999999999999999998888888888877 567777766555 5899999999999
Q ss_pred HHHHHhcCChhhHHHHHhccC---CCChhHHHHHHHH--H-HHHccCcce----EEEccCCCCCCCcccceEEEEEeccC
Q 001059 927 TVGLRFCGAADQALPRLRGAL---PADKPTRKALDEL--Y-LRIWRIEKN----IYIDALMPPIESYHRNLFFQVFSVKE 996 (1170)
Q Consensus 927 ~l~~~~~g~~~~~l~~l~~~~---~~~~~~~~~l~~L--~-l~~~g~~~~----i~~Dl~lvrgldYYtG~VFe~~~~~~ 996 (1170)
.++ .+.|+..++++++++++ ..++.+.+++++| . ++.+ +..+ +.||++++||++||||+|||+|..+.
T Consensus 241 ~l~-~~~g~~~~~l~~l~~~~~~~~~~~~~~~~l~~l~~~~l~~~-~~~~~~~~~~~D~~lvrgldYYtG~vFe~~~~~~ 318 (465)
T 3net_A 241 DFV-KIDGSVDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVR-NLGVPDKRFCIDLAIARGLNYYTGTVYETTLIGH 318 (465)
T ss_dssp HHH-TCCSCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH-HTTCCGGGEEECTTCCCCSSSEEEEEEEEEETTC
T ss_pred HHH-HhcCChHHHHHHHHHhhhccccChHHHHHHHHHHHHHHHHh-cccccCceEEEccCccCCCcccCceEEEEEECCC
Confidence 998 68898888999999875 7788888999888 3 4555 5446 99999999999999999999998763
Q ss_pred CCcccccccceeccccccchhhhhc-ccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCC-CCCCceEEEEEcCC
Q 001059 997 KYPATLVEGTLLAVGGRYDYLLHRM-WDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVR-NEAGTSVLVCSRGG 1074 (1170)
Q Consensus 997 ~~~~~~~~~~~I~~GGRYD~L~~~f-g~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~-~~~~~~vlv~~~~~ 1074 (1170)
+ .+++||+|||||+|+++| |+ ++||||||||+|||+.+|.+....+. ...+.+|+|++.+
T Consensus 319 ~------~~~~i~~GGRYD~L~~~f~g~-----------~~pavGfaiGieRli~~L~e~g~~p~~~~~p~~V~Vi~~~- 380 (465)
T 3net_A 319 E------ALGSICSGGRYEELVGTFIGE-----------KMPGVGISIGLTRLISRLLKAGILNTLPPTPAQVVVVNMQ- 380 (465)
T ss_dssp G------GGCCSSEEEEESSSSGGGTCS-----------CCCEEEEEEEHHHHHHHHHHTTSSCCCCSCSCCEEECCSC-
T ss_pred C------ccceecccccHHHHhhhhcCC-----------CCceeeeeccHHHHHHHHHHcCCCCCcCCCCCeEEEEEcC-
Confidence 2 345899999999998876 43 26999999999999998864332222 3567899999885
Q ss_pred CccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCC-eEEEEEcCCCcccccchHHHHH
Q 001059 1075 GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKG-LVKVRHLDVKKEKEVQRESLVR 1153 (1170)
Q Consensus 1075 ~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~-~v~vk~l~~~eq~~v~~~~l~~ 1153 (1170)
++...+|++++++||+.|++|++++. ++++++++++|++.|+|++|+||++ +++| +|+||||.+++|..|+++++++
T Consensus 381 ~~~~~~A~~la~~LR~~Gi~ve~d~~-~~sl~~q~k~A~~~g~p~~iiiG~~-~~~g~~V~vk~~~t~eq~~v~~~el~~ 458 (465)
T 3net_A 381 DELMPTYLKVSQQLRQAGLNVITNFE-KRQLGKQFQAADKQGIRFCVIIGAD-EAAAQKSSLKDLQSGEQVEVALADLAE 458 (465)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEECCS-CCCHHHHHHHHHHHTCCEEEECCHH-HHHTTCCEEEETTTTEEEECC-CCHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeC-CCCHHHHHHHHHHcCCCEEEEECch-hhcCCEEEEEECCCCceEEeeHHHHHH
Confidence 67789999999999999999998876 6799999999999999999999999 9999 9999999999999999999999
Q ss_pred HHHHH
Q 001059 1154 FLLDA 1158 (1170)
Q Consensus 1154 ~l~~~ 1158 (1170)
+|++.
T Consensus 459 ~l~~~ 463 (465)
T 3net_A 459 EIKRR 463 (465)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 88764
No 3
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=100.00 E-value=4.1e-69 Score=641.26 Aligned_cols=405 Identities=16% Similarity=0.185 Sum_probs=331.7
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
+.|+|++||+|.++.+++++++.++++|++|||++|.||+| .+..+ |+...++||+|.|++|+.++||||+|+|+
T Consensus 30 ~~p~G~~d~lP~~~~~~~~i~~~i~~~~~~~Gy~eI~tP~lE~~el~~~~~G~~~~~~my~f~D~~g~~l~LRpd~T~~~ 109 (456)
T 3lc0_A 30 EPVQGCRDFPPEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGEEITEQMFNFITKGGHRVALRPEMTPSL 109 (456)
T ss_dssp SCSTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEGGGGCCCSCCHHHHTCEEEECSSSCEEEECSCSHHHH
T ss_pred cCCCCCcccCHhHHHHHHHHHHHHHHHHHHCCCEEEECCcEeehhhhccccccchhhceEEEEcCCCCEEecCCcCHHHH
Confidence 57899999999999999999999999999999999999999 33333 66678999999999999999999999999
Q ss_pred HHHHHhCCC---CceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCC-cceEEEeCc
Q 001059 788 IRWAISNQK---SSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHA-ESCDIHLNH 862 (1170)
Q Consensus 788 aR~~~~~~~---~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~-~~~~i~lg~ 862 (1170)
||+++++.. .|+|+||+|+|||+|+|+.+| |||+|+|+|+||.+++.+|+|+|.++.++|+.+|+. ++++|+|||
T Consensus 110 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~~~gR~ReF~Q~g~ei~G~~~~~~DaEvi~l~~~~l~~lgl~~~~~~i~in~ 189 (456)
T 3lc0_A 110 ARLLLGKGRSLLLPAKWYSIPQCWRYEAITRGRRREHYQWNMDIVGVKSVSAEVELVCAACWAMRSLGLSSKDVGIKVNS 189 (456)
T ss_dssp HHHHHHSCTTCCSSEEEEECCEEECCCC-----CCEEEEEEEEEESCCSTHHHHHHHHHHHHHHHHTTCCTTTEEEEEEE
T ss_pred HHHHHhcCcccCCCEEEEEeccEEecCCCCCCCccceEEEEEEEEcCCChHhhHHHHHHHHHHHHHcCCCCCceEEEEcC
Confidence 999998753 499999999999999988554 569999999999999999999999999999999993 249999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
+++++++++.+|++++.+..++.++++++ +.+++++++.+ .+.+++++.++.+..++. +. .++.
T Consensus 190 ~~il~~~l~~~g~~~~~~~~v~~~idkl~---------~~~~~~~~~~L-~~~~l~~~~~~~l~~~~~-~~-----~~~~ 253 (456)
T 3lc0_A 190 RKVLQTVVEQAGVTSDKFAPVCVIVDKME---------KIPREEVEAQL-AVLGLEPTVVDAITTTLS-LK-----SIDE 253 (456)
T ss_dssp HHHHHHHHHHTTCCGGGHHHHHHHHTTTT---------TSCHHHHHHHH-HHTTCCHHHHHHHHHHHT-CC-----SHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhc---------ccCHHHHHHHH-HHcCCCHHHHHHHHHHhc-cC-----CHHH
Confidence 99999999999999988888888888777 45567776554 447899999999988873 22 2444
Q ss_pred HhccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhh
Q 001059 943 LRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHR 1020 (1170)
Q Consensus 943 l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~ 1020 (1170)
+...+.......+.|.++ +++.+|+.+++.||++++||++||||+|||+|... +.+++||+|||||+|++.
T Consensus 254 l~~~l~~~~~~~~~L~~l~~~l~~~gi~~~~~~D~~lvRgldYYTG~vFE~~~~~-------g~~~~I~~GGRYD~Lv~~ 326 (456)
T 3lc0_A 254 IAQRVGEEHEAVKELRQFFEQVEAYGYGDWVLFDASVVRGLAYYTGIVFEGFDRE-------GKFRALCGGGRYDNLLTT 326 (456)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHHTCGGGEEECTTCCCSCTTCCSEEEEEEETT-------SCSSCSEEEEECSSHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHcCCCceEEEecCccCCccccCCeEEEEEECC-------CCcceEeecccHHHHHHH
Confidence 555444434445555555 77889998889999999999999999999999642 234589999999999999
Q ss_pred cccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeC
Q 001059 1021 MWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV 1100 (1170)
Q Consensus 1021 fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~ 1100 (1170)
||++ .++||||||+|+|||+.+|.+..........++++|++.+ ++...+|+++|+.||+.|++|++++.
T Consensus 327 fg~~---------~~~PavGFaig~eRl~~~l~~~~~~~~~~~~~~v~v~~~~-~~~~~~a~~la~~LR~~Gi~ve~~~~ 396 (456)
T 3lc0_A 327 YGSP---------TPIPCAGFGFGDCVIVELLQEKRLLPDIPHVVDDVVIPFD-ESMRPHALAVLRRLRDAGRSADIILD 396 (456)
T ss_dssp TTCS---------SCCCEEEEEEESSHHHHHHHHTTCCCCCCCCEEEEEEESS-GGGHHHHHHHHHHHHHTTCCEEECCS
T ss_pred hCCC---------CCCCEEEEEeEHHHHHHHHHhcCCCCccCCCCcEEEEEcC-HHHHHHHHHHHHHHHHCCCeEEEecC
Confidence 9764 1369999999999999988643222223345789999886 66788999999999999999998876
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHH
Q 001059 1101 PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1151 (1170)
Q Consensus 1101 ~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l 1151 (1170)
.++++++++||++.|++++||+|++|+++|+|+||||.+|+|..+++++.
T Consensus 397 -~~slkkq~k~A~k~ga~~vviiGe~E~~~g~v~vK~l~tgeQ~~~~~~~~ 446 (456)
T 3lc0_A 397 -KKKVVQAFNYADRVGAVRAVLVAPEEWERGEVQVKMLREGTGKEEGGAER 446 (456)
T ss_dssp -CCCHHHHHHHHHHTTEEEEEEECHHHHHTTEEEEEECC------------
T ss_pred -CCCHHHHHHHHHHcCCCEEEEECCchhcCCeEEEEECCCCCeEEeccccc
Confidence 57899999999999999999999999999999999999999999988764
No 4
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.5e-68 Score=641.09 Aligned_cols=427 Identities=25% Similarity=0.427 Sum_probs=360.0
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
+.|+|++||+|.++.++++|++.++++|++|||++|.||+| .+.++..+..++||+|.|++|+.++||||+|+|+|
T Consensus 15 ~~p~G~~D~lP~~~~~~~~i~~~~~~~~~~~Gy~eI~tP~le~~el~~~~~g~~~~~~y~f~D~~g~~l~LRPd~T~~~a 94 (464)
T 4g84_A 15 KTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFA 94 (464)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTTSCC----CCCBBCCCSSCCEEECSCSHHHHH
T ss_pred eCCCCcCccCHHHHHHHHHHHHHHHHHHHHCCCeEEECcccCcHHHhccccCcCcceeEEEECCCCCEEEeCCcCcHHHH
Confidence 67999999999999999999999999999999999999999 44555444468899999999999999999999999
Q ss_pred HHHHhCCCCceeEEEecCeEEcCCCC---CCCCceeEeEEEEeCCCCc-ccHHHHHHHHHHHHHHcCCCcceEEEeCcHH
Q 001059 789 RWAISNQKSSFKRYEISSVYRRAIGH---SPPNRYLQGDFDIIGGASA-LTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 864 (1170)
Q Consensus 789 R~~~~~~~~P~r~~Y~g~VfR~e~~~---~~~~ef~Q~GvEiiG~~~~-~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~ 864 (1170)
|++++|+..|+|+||+|+|||+|+|+ +|.|||+|+|+|+||..++ .+|+|+|.++.++|+.+|+.+ +.++|||++
T Consensus 95 R~~~~~~~~p~k~~y~g~vfR~erp~~~~gR~Ref~Q~g~ei~G~~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~i~~~~ 173 (464)
T 4g84_A 95 RYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGD-FLVKVNDRR 173 (464)
T ss_dssp HHHHHTTCSCEEEEEEEEEECCCC------CCSEEEEEEEEEESCCSTTHHHHHHHHHHHHHHHHHTCCC-EEEEEEEHH
T ss_pred HHHHhcCCCCceeEEEecceeccCCccccCccceeeecceeccCCccchhhHHHHHHHHHHHHHHhCCCC-cceeecchh
Confidence 99999988899999999999999984 3556799999999998665 689999999999999999986 999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHh
Q 001059 865 LLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLR 944 (1170)
Q Consensus 865 il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~ 944 (1170)
+++++++.++++++..+.+..++++++ +.++++++++++...+++++.++.+..++ ...|.. +.++.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~~l~---------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~-~~~g~~-~~~~~~~ 242 (464)
T 4g84_A 174 ILDGMFAICGVSDSKFRTICSSVDKLD---------KVSWEEVKNEMVGEKGLAPEVADRIGDYV-QQHGGV-SLVEQLL 242 (464)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHGGGG---------TSCHHHHHHHHHHTTCCCHHHHHHHHHHH-TCEESH-HHHHHHT
T ss_pred hHHHHHHhhcCcHHHHHHHHHHHHHhc---------hhhHHHHHHHHHhhcCCCHHHHHHHHHHH-HhcCCc-hHHHHHH
Confidence 999999999999999999989998887 45677888888888999999999998887 455553 3344332
Q ss_pred c--cCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcc--cccccceeccccccc
Q 001059 945 G--ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPA--TLVEGTLLAVGGRYD 1015 (1170)
Q Consensus 945 ~--~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~--~~~~~~~I~~GGRYD 1015 (1170)
. .+..+....++++++ +++.+|+..+|.||++++||++||||+|||++..+.+... .....++||+|||||
T Consensus 243 ~~~~~~~~~~~~~~l~~l~~l~~~l~~~g~~~~i~~d~~lvrgldYYtG~vFe~~~~~~~~~~~~~~~~~~~i~~GGRYD 322 (464)
T 4g84_A 243 QDPKLSQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYD 322 (464)
T ss_dssp TCHHHHTCHHHHHHHHHHHHHHHHHHHTTCGGGEEEETTCCCCTTTCSSEEEEEEEEECC-------EEEEEEEEEEECC
T ss_pred hcccccccHHHHHHHHHHHHHHhHHHhhCCCcceeecccccCCCcCcCCeEEEEEECCcccccccCCcccceeccCCchh
Confidence 2 122345555666666 7888999999999999999999999999999987654311 112235899999999
Q ss_pred hhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCC---CCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcC
Q 001059 1016 YLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD---FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1092 (1170)
Q Consensus 1016 ~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~---~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~G 1092 (1170)
+|++.||. ++.++||||||+|+|||+.+|++. ..+.....+++|+|++.+ +....+|+++++.||+.|
T Consensus 323 ~L~~~~~~--------~g~~~pavGfaigieRl~~~l~~~~~~~~~~~~~~~~~v~v~~~~-~~~~~~a~~l~~~Lr~~G 393 (464)
T 4g84_A 323 GLVGMFDP--------KGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQ-KKLLEERLKLVSELWDAG 393 (464)
T ss_dssp STGGGTST--------TCCCCCEEEEEECHHHHHHHHHHHHHTTTCCCCSCCCCEEEECSS-SSCHHHHHHHHHHHHHTT
T ss_pred HHHHHhcc--------CCCCCCCccccccHHHHHHHHHHhccccCcccccccceEEEEeCC-HHHHHHHHHHHHHHHHCC
Confidence 99988842 234679999999999999988632 222234557789999986 778899999999999999
Q ss_pred CeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 001059 1093 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1093 i~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
++|++++...+++++++++|++.|++|+||+|++|+++|+|+||||.+|+|.+|++++++++|++.++
T Consensus 394 i~ve~~~~~~~~l~~q~k~A~~~g~~~~viiG~~E~~~g~v~vK~l~tgeq~~v~~~elv~~lk~~l~ 461 (464)
T 4g84_A 394 IKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTG 461 (464)
T ss_dssp CCEECCSCSSCCHHHHHHHHHHHTCCEEEECCHHHHHHTEEEEEETTTCCEEEEEGGGHHHHHHHHHT
T ss_pred CcEEEEeCCCCCHHHHHHHHHHCCCCEEEEECchhhhCCEEEEEECCCCCeEEeeHHHHHHHHHHHhc
Confidence 99998765566899999999999999999999999999999999999999999999999999999876
No 5
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=100.00 E-value=1.7e-61 Score=577.11 Aligned_cols=409 Identities=17% Similarity=0.232 Sum_probs=347.2
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC-CCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG-DCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~-~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
+.|+|++||+|.+++.+++|++.++++|++|||++|.||+| ++.. .|....++||+|.|++|+.++||||+|+|+
T Consensus 7 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~~~em~~~~D~~g~~l~LrPd~t~~~ 86 (434)
T 1wu7_A 7 EKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTLIPEATPST 86 (434)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETHHHHTTSCTTGGGGSCEEECTTSCEEEECSCSHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCEEeeccccccHHHhhhccCCccccceEEEECCCCCEEEeCCCChHHH
Confidence 57899999999999999999999999999999999999999 3334 366778999999999999999999999999
Q ss_pred HHHHHhCCC--CceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcc-eEEEeCcH
Q 001059 788 IRWAISNQK--SSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAES-CDIHLNHG 863 (1170)
Q Consensus 788 aR~~~~~~~--~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~-~~i~lg~~ 863 (1170)
||++++++. .|+|+||+|+|||+|+|+.+| |||+|+|+|+||.+++.+|+|+|.++.++|+++|++ + +.|+|||+
T Consensus 87 aR~~~~~~~~~lP~rl~~~g~vfR~erp~~gR~REF~Q~d~ei~g~~~~~ad~E~i~~~~~~l~~lgl~-~~~~i~l~~~ 165 (434)
T 1wu7_A 87 VRMVTSRKDLQRPLRWYSFPKVWRYEEPQAGRYREHYQFNADIFGSDSPEADAEVIALASSILDRLGLQ-DIYEIRINSR 165 (434)
T ss_dssp HHHHTTCTTCCSSEEEEECCEEECCCCSCSSCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEH
T ss_pred HHHHHhcCCCCCCeEEEEEcCeecCCCCCCCCccceEEeeEEEEcCCChHhhHHHHHHHHHHHHHcCCC-CceEEEECCh
Confidence 999998743 699999999999999888655 569999999999999999999999999999999995 6 99999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 001059 864 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 943 (1170)
Q Consensus 864 ~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 943 (1170)
+++.++++.+| +++++ .++.+++++++ ..+++++..+ ...++....++.+.+++ ...++..+ ++.+
T Consensus 166 g~~~~~~~~~g-~~~~~-~l~~~l~~~~~---------~~~~~~~~~l-~~~~l~~~~~~~~~~~~-~~~~~~~~-l~~~ 231 (434)
T 1wu7_A 166 KIMEEIIGGMT-SSDPF-SVFSIIDRYHK---------ISREEFVDQL-RSAGIGEDGVSMIADLC-SGTRGIDE-MARI 231 (434)
T ss_dssp HHHHHHHHTTC-SSCHH-HHHHHHHTTTT---------SCHHHHHHHH-HHTTCCHHHHHHHHHHH-HSCBCHHH-HHHH
T ss_pred hhHHHHHHHhC-cHhHH-HHHHHHHHHhc---------cchHHHHHHH-HhCCCCHHHHHHHHHHH-HhCCCHHH-HHHH
Confidence 99999998676 77777 88888888773 3455554444 55788888888888887 34455444 6655
Q ss_pred hccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhc
Q 001059 944 RGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRM 1021 (1170)
Q Consensus 944 ~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~f 1021 (1170)
+ .......+.++++ ++..+|+. +|.||++++||++||||+||+++... +.+.+||+|||||+|++.|
T Consensus 232 ~---~~~~~~~~~l~~~~~~l~~~g~~-~i~~D~~l~rgldYYtg~vFe~~~~~-------g~~~~v~~GGRYD~li~~f 300 (434)
T 1wu7_A 232 T---GKSSEEIARMAAVEDLLASYGVK-NVRYDFSIVRGLSYYTGIVFEAYDRS-------GQFRAILGGGRYDNLASLM 300 (434)
T ss_dssp T---TCCCHHHHHHHHHHHHHHHTTCC-CCEECTTCCTTTTTCSSEEEEEEETT-------SSCSCSSEEEECTTHHHHH
T ss_pred H---hhHHHHHHHHHHHHHHHHHcCCC-EEEECCCcccCccccCCeEEEEEECC-------CCcCeeeecccHHHHHHHh
Confidence 5 1222344555555 77888986 79999999999999999999998742 1235799999999999999
Q ss_pred ccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeCC
Q 001059 1022 WDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVP 1101 (1170)
Q Consensus 1022 g~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~~ 1101 (1170)
|++ +.||+|||||+|||+.+|.+..... +.++.+|+|++.+ ++...+|.+++++||+.|++|++++.
T Consensus 301 gg~----------~~pa~Gf~igveRl~~~l~e~~~~~-p~~p~~v~v~~~~-~~~~~~a~~l~~~Lr~~Gi~v~~d~~- 367 (434)
T 1wu7_A 301 SGE----------SVPAVGFGMGDAVISLLLKRENVQI-PREKKSVYICRVG-KINSSIMNEYSRKLRERGMNVTVEIM- 367 (434)
T ss_dssp HSC----------CCCEEEEEEEHHHHHHHHHHTTCCC-CCSSCEEEEEEES-SCCHHHHHHHHHHHHTTTCEEEECCS-
T ss_pred CCC----------CCCeEEEEEcHHHHHHHHHhcCCcc-CCCCCcEEEEEcC-hHHHHHHHHHHHHHHHCCCeEEEecC-
Confidence 753 4699999999999999886432220 2256899999986 66789999999999999999998876
Q ss_pred CCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 001059 1102 DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1102 ~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
++++++++++|++.|+|++|++|++|+++|+|+||++.++++..|+++++++++++.|+
T Consensus 368 ~~~~~~~~~~a~~~g~~~~iiiG~~e~~~g~v~vk~~~~~~~~~v~~~el~~~l~~~~~ 426 (434)
T 1wu7_A 368 ERGLSAQLKYASAIGADFAVIFGERDLERGVVTIRNMYTGSQENVGLDSVVEHLISQAT 426 (434)
T ss_dssp CCCHHHHHHHHHHTTCSEEEEEEHHHHHTTEEEEEETTTCCEEEEEGGGHHHHHHHCCC
T ss_pred CCCHHHHHHHHHHCCCCEEEEECchhhhcCeEEEEECCCCCeEEEcHHHHHHHHHHHhh
Confidence 67999999999999999999999999999999999999999999999999999987653
No 6
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=100.00 E-value=1.3e-60 Score=559.21 Aligned_cols=373 Identities=16% Similarity=0.190 Sum_probs=312.2
Q ss_pred CCCCCccccccchhhhhhhhHHhHHHHHHHHcCCcccccccee----ccCCCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 712 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMY----LLGDCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 712 n~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~----~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
-+.|+|++||+|.++.++++|++.++++|++|||++|.||+|. +...++...++||+|.|++|+.++||||+|+|+
T Consensus 10 ~~~p~G~~d~lP~~~~~~~~i~~~l~~~~~~~Gy~eI~tP~lE~~el~~~~g~~~~~~my~f~D~~g~~l~LRpd~T~~~ 89 (400)
T 3od1_A 10 FEKPFGMRDTLPEWYKTKKNICDQMTEEINLWGYDMIETPTLEYYETVGVVSAILDQQLFKLLDQQGNTLVLRPDMTAPI 89 (400)
T ss_dssp TCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETTTHHHHSSSCGGGSCEEECTTSCEEEECSCSHHHH
T ss_pred ccCCCcchhcCHHHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHhhcCCccccceEEEECCCCCEEEECCCCHHHH
Confidence 4678999999999999999999999999999999999999993 222366778999999999999999999999999
Q ss_pred HHHHHhC---CCCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcH
Q 001059 788 IRWAISN---QKSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 863 (1170)
Q Consensus 788 aR~~~~~---~~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~ 863 (1170)
||+++++ ...|+|+||+|+|||+|+|+.+| |||+|+|+|+||.+++.+|+|+|.++.++|+.+|+.+ ++|+|||+
T Consensus 90 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~~~gR~Ref~Q~g~ei~G~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~l~~~ 168 (400)
T 3od1_A 90 ARLVASSLKDRAYPLRLAYQSNVYRAQQNEGGKPAEFEQLGVELIGDGTASADGEVIALMIAALKRAGLSE-FKVAIGHV 168 (400)
T ss_dssp HHHHHHHCSSSCSCEEEEEEEEEECCCC---CCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHTTCCS-EEEEEEEH
T ss_pred HHHHHhhcccCCCCeEEEEEcCEEeCCCCCCCCCCccEEeEEEEECCCChHhHHHHHHHHHHHHHHCCCCc-eEEEecCH
Confidence 9999885 35699999999999999988554 5699999999999999999999999999999999985 99999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 001059 864 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 943 (1170)
Q Consensus 864 ~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 943 (1170)
++++++++.+|++++.++.++++++++|+ .+ + ++++++.+++++.++.+..++ .+.|+. ++++.+
T Consensus 169 ~i~~~ll~~~~~~~~~~~~l~~~l~~~~~---------~~---~-~~~l~~~~l~~~~~~~l~~l~-~~~g~~-~~l~~~ 233 (400)
T 3od1_A 169 GYVNALLMDVVGNEQRADRLRRFLYEKNY---------VG---Y-REHVKSLNLSTIDKSRLMNLL-SLRGGR-AAIEEA 233 (400)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHTTCH---------HH---H-HHHHHHSSSCHHHHHHHHHGG-GCEESH-HHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcCh---------hH---H-HHHHHhcCCCHHHHHHHHHHH-hccCCH-HHHHHH
Confidence 99999999999999999999999998873 22 2 445666789999999999998 466664 588888
Q ss_pred hccCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhh
Q 001059 944 RGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLL 1018 (1170)
Q Consensus 944 ~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~ 1018 (1170)
..+. .++...+++++| +|+.+|+.+++.||++++||++||||+|||+|..+.+. +||+|||||+|+
T Consensus 234 ~~l~-~~~~~~~~l~~l~~l~~~L~~~gi~~~~~~D~~lvRgldYYTG~vFe~~~~~~g~--------~i~~GGRYD~L~ 304 (400)
T 3od1_A 234 RGLI-QTEKGKTALAEMTKLYEVLESYGASEYVKFDLTLVLHMSYYTGVVFEGYGNRLGV--------PLCSGGRYDELL 304 (400)
T ss_dssp HTTC-CSHHHHHHHHHHHHHHHHHHHTTCGGGEEEETTCCSCSSSCCSEEEEEEETTCSS--------EEEEEEECTTHH
T ss_pred Hhhh-cChhhHHHHHHHHHHHHHHHHcCCCceEEEeCCccCCCcccCCeEEEEEECCCCC--------eeecccccchhh
Confidence 8754 456666666666 78899998889999999999999999999999876543 799999999999
Q ss_pred hhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEe
Q 001059 1019 HRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFV 1098 (1170)
Q Consensus 1019 ~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~ 1098 (1170)
+.||++ +||||||+|+|||+.+|....... ...+++|+. + ++...+|+++|++||+.|++|++.
T Consensus 305 ~~fG~~-----------~pavGfaiglerL~~~l~~~~~~~---~~~~v~v~~-~-~~~~~~a~~~a~~LR~~G~~v~~~ 368 (400)
T 3od1_A 305 SKFHRP-----------AQATGFGVRIDLLVEALNGEIISN---GHEQTCILF-S-NERRFEAIELARKKRANGEAVVLQ 368 (400)
T ss_dssp HHTTCC-----------CCEEEEEEEHHHHHHHHCC---------CCCEEEEE-C-GGGHHHHHHHHHHHHTTTCCEEEE
T ss_pred hccCCC-----------CCEEEEEeeHHHHHHHHHhcCCCC---CCCeEEEEE-C-cHHHHHHHHHHHHHHHCCCEEEEE
Confidence 998652 699999999999999887432211 112366654 3 566889999999999999999988
Q ss_pred eCCCCCHHHHHHHHHhCCCcEEEEEcCCccc
Q 001059 1099 PVPDPSLTEQYEYASEHDIKCLVILTDTGAQ 1129 (1170)
Q Consensus 1099 ~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~ 1129 (1170)
..... ... ||..+|+..++++.+.+-.
T Consensus 369 ~~~~~--~~~--~~~~~~~~~~~~~~~~~~~ 395 (400)
T 3od1_A 369 DLAGV--TDV--DAMSSNYQDVIYCIGTAGR 395 (400)
T ss_dssp EGGGC--SCH--HHHHTTSSEEEEECSCC--
T ss_pred ecCCh--hHH--HHHHcCCCEEEEEecCCCC
Confidence 76432 222 9999999999999887543
No 7
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis}
Probab=100.00 E-value=1.7e-59 Score=561.64 Aligned_cols=397 Identities=17% Similarity=0.213 Sum_probs=305.9
Q ss_pred CCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Cc---ccccceEEEeccC-CceeeecCC
Q 001059 712 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CP---QFKRNTVKLLTHG-GDLLELSHE 782 (1170)
Q Consensus 712 n~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~---~~~~~my~f~D~~-G~~laLRPD 782 (1170)
-+.|+|++||+|.++.++++|++.++++|++|||++|.||+| ++... |+ ...++||+|.|++ |+.++||||
T Consensus 32 ~~~~~G~~d~lP~~~~~~~~l~~~i~~~~~~~Gy~eI~tP~le~~el~~~~~G~~~d~~~~~my~~~D~~~g~~l~LRPd 111 (467)
T 4e51_A 32 LTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGIGEVTDIVEKEMYSFVDALNGENLTLRPE 111 (467)
T ss_dssp CCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTCTTSHHHHHTCCEEECTTTCCEEEECSC
T ss_pred CCCCCCceeeCHHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHhhhccCCcccccccceEEEecCCCCCEEEeCcc
Confidence 367899999999999999999999999999999999999999 33222 33 3678999999999 999999999
Q ss_pred CCHHHHHHHHhCC---CCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEE
Q 001059 783 LRLPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 858 (1170)
Q Consensus 783 ~T~~iaR~~~~~~---~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i 858 (1170)
+|+|+||+++++. ..|+|+||+|+|||+|+|+.+| |||+|+|+|+||.+++.+|+|+|.++.++|+.||+.+ ++|
T Consensus 112 ~t~~~ar~~~~~~~~~~lP~r~~~~g~vfR~E~~~~gR~ReF~Q~d~ei~g~~~~~adaEvi~l~~~~l~~lGl~~-~~i 190 (467)
T 4e51_A 112 NTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIVMMCQRLWEDLGLTG-IKL 190 (467)
T ss_dssp SHHHHHHHHHHTTTTTTSCEEEEEEEEEECCCCC---CCSEEEEEEEEEETCCCSHHHHHHHHHHHHHHHHHTCCC-EEE
T ss_pred cHHHHHHHHHHcccccCCCEEEEEEccEEccCCCCCCCcCceEEEEEEEEeCCChHHHHHHHHHHHHHHHHcCCCc-eEE
Confidence 9999999998754 3599999999999999988554 5699999999999999999999999999999999986 999
Q ss_pred EeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHH----HHHHHhcC
Q 001059 859 HLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQ----TVGLRFCG 934 (1170)
Q Consensus 859 ~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~----~l~~~~~g 934 (1170)
+|||++..+.. ...++.+..++.... ..++++..+.+. .++.....
T Consensus 191 ~in~~g~~~~~-------~~~~~~l~~~l~~~~-----------------------~~l~~~~~~~l~~~~l~~ld~k~~ 240 (467)
T 4e51_A 191 EINSLGLAEER-------AAHRVELIKYLEQHA-----------------------DKLDDDAQRRLYTNPLRVLDTKNP 240 (467)
T ss_dssp EEEECCCHHHH-------HHHHHHHHHHHHTTG-----------------------GGCCHHHHHHHTTCTHHHHTCCCG
T ss_pred EEeCCCchhhh-------HHHHHHHHHHHHHHH-----------------------hccCHHHHHHHHhchHHHhhccch
Confidence 99997643211 112233333333210 112222222211 11100000
Q ss_pred ChhhHHHHHhccCC-CChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccc
Q 001059 935 AADQALPRLRGALP-ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1011 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~-~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~G 1011 (1170)
...++++.+..++. .+....+.++.| +|+.+|+. +.||++++||++||||+|||+|..+.+ .+++||+|
T Consensus 241 ~~~~~l~~a~~l~~~l~~~~~~~l~~l~~~L~~~gi~--~~~d~~lvRgl~YYtg~vFe~~~~~~g------~~~tI~~G 312 (467)
T 4e51_A 241 ALQEIVRNAPKLIDFLGDVSRAHFEGLQRLLKANNVP--FTINPRLVRGLDYYNLTVFEWVTDKLG------AQGTVAAG 312 (467)
T ss_dssp GGHHHHHTSCCGGGGCCHHHHHHHHHHHHHHHHTTCC--EEECTTCCCSCTTCCSEEEEEEECC----------CEEEEE
T ss_pred hHHHHHhhhHHHHHhhhHHHHHHHHHHHHHHHHcCCe--EEEcCccccCccccCCeEEEEEECCCC------CcceecCC
Confidence 00112222111111 134455667777 78889984 999999999999999999999987644 23589999
Q ss_pred cccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHc
Q 001059 1012 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE 1091 (1170)
Q Consensus 1012 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~ 1091 (1170)
||||+|++.||++ +.||||||+|+|||+.+|.+....+ ...+.+|+|++.+ ++...+|+++++.||+.
T Consensus 313 GRYD~Lv~~~g~~----------~~PavGfa~gleRl~~~l~~~~~~~-~~~p~~V~Vip~~-~~~~~~A~~ia~~LR~~ 380 (467)
T 4e51_A 313 GRYDPLIEQLGGK----------PTAACGWAMGIERILELLKEEHLVP-EQEGVDVYVVHQG-DAAREQAFIVAERLRDT 380 (467)
T ss_dssp EECTHHHHHTTSS----------CCCEEEEEEEHHHHHHHHHHTTCCC-CCCCCSEEEEECS-HHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHhCCC----------CCCceeehHHHHHHHHHHHhcCCcc-cCCCCeEEEEEcC-hHHHHHHHHHHHHHHHc
Confidence 9999999999764 3699999999999999887432221 2466789999986 66788999999999999
Q ss_pred CCeEEEeeCC---CCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCC-C------cccccchHHHHHHHHHHH
Q 001059 1092 NIKAQFVPVP---DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV-K------KEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1092 Gi~v~~~~~~---~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~-~------eq~~v~~~~l~~~l~~~l 1159 (1170)
|++|++++.. ++++++++++|++.|++|+|+||++|+++|+|+||||.+ + +|..|++++++++|++.+
T Consensus 381 Gi~ve~d~~~~~~~~sl~kq~~~A~~~g~~~~iiiG~~E~~~g~V~vk~~~~~~~~~~~~~q~~v~~~elv~~l~~~~ 458 (467)
T 4e51_A 381 GLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDDGEKSVQQSVPVESLTEFLINAM 458 (467)
T ss_dssp TCCEEECCCTTSSCCCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEEC---------CCCEEEEGGGHHHHHHHHH
T ss_pred CCeEEEEcccccccCCHHHHHHHHHHcCCCEEEEECcchhhCCeEEEEECCCCCCCCCcccceEEcHHHHHHHHHHHh
Confidence 9999987753 579999999999999999999999999999999999999 8 999999999999999887
No 8
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A
Probab=100.00 E-value=3.5e-56 Score=529.83 Aligned_cols=398 Identities=16% Similarity=0.203 Sum_probs=302.3
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Cc---ccccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CP---QFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~---~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+.|+|++||+|.++..+++|++.++++|++|||++|.||+| ++... |+ ...++||+|.|++|+.++||||+|
T Consensus 4 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~~D~~g~~l~Lrpd~t 83 (421)
T 1h4v_B 4 RAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGT 83 (421)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHHHHHcCCEEecccccccHHHhhhccCCcccccccceEEEECCCCCEEeeCCcch
Confidence 57899999999999999999999999999999999999999 33333 33 467899999999999999999999
Q ss_pred HHHHHHHHhCC----CCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEE
Q 001059 785 LPFIRWAISNQ----KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 859 (1170)
Q Consensus 785 ~~iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~ 859 (1170)
+|+||+++++. ..|+|+||+|+|||+|+|+.+| |||+|+|+|+||.+++.+|+|+|.++.++|+++|+++ ++|+
T Consensus 84 ~~~ar~~~~~~~~~~~lP~rl~~~g~vfR~e~p~~gR~REf~Q~g~e~~g~~~~~ad~e~i~~~~~~l~~lgl~~-~~i~ 162 (421)
T 1h4v_B 84 AAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRR-LKVK 162 (421)
T ss_pred HHHHHHHHhccccccCCCeEEEEecCeecCCCCCCCCcccEEEccEEEECCCChhhhHHHHHHHHHHHHHcCCCc-eEEE
Confidence 99999998652 4699999999999999988655 5699999999999999999999999999999999985 9999
Q ss_pred eCcHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCCCCcccccchHHHHHHHHHHHcCCc--HHHHHHHHHHHHHhcCCh
Q 001059 860 LNHGDLLEAIWSWAGIKAEHREKVAELLAMM-GSLRPQSSEWKSKWVVIRRQLLQELNLA--EAVVNRLQTVGLRFCGAA 936 (1170)
Q Consensus 860 lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~l~~l~~~~~g~~ 936 (1170)
|||++..... +..++.+..++... +.+. . +....+ ...++. ....+.+.+++..+.+
T Consensus 163 i~~~g~~~~~-------~~~~~~l~~~l~~~~~~l~------~----~~~~~l-~~~~~~~l~~~~~~~~~~~~~~~~-- 222 (421)
T 1h4v_B 163 LSSVGDPEDR-------ARYNAYLREVLSPHREALS------E----DSKERL-EENPMRILDSKSERDQALLKELGV-- 222 (421)
T ss_pred EcCCCchhhH-------HHHHHHHHHHHHHHHhhcC------H----HHHHHH-HhcchHhhhcccHHHHHHHHhcCh--
Confidence 9996532210 01111121222111 0000 0 000111 000000 0000011111100000
Q ss_pred hhHHHHHhccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 937 DQALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 937 ~~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
. ++...+ .....+.++++ ++..+|+ .+.+|++++||++||||++|+++..+.+ ...+||+||||
T Consensus 223 ~----~l~~~l--~~~~~~~l~~~~~~l~~~g~--~i~~D~~l~rg~~YYtg~vFe~~~~~~g------~~~~v~~GGRY 288 (421)
T 1h4v_B 223 R----PMLDFL--GEEARAHLKEVERHLERLSV--PYELEPALVRGLDYYVRTAFEVHHEEIG------AQSALGGGGRY 288 (421)
T ss_pred H----HHHHHh--hHHHHHHHHHHHHHHHHcCC--eEEEecccccchhhhcCeEEEEEecCCC------CcCccccCCcH
Confidence 0 111101 12334455555 6677776 6999999999999999999999976433 23579999999
Q ss_pred chhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCC-CCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCC
Q 001059 1015 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD-FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENI 1093 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~-~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi 1093 (1170)
|+|++.||++ ..||+|||||+|||+.+|.+. ..++. .++.+|+|++.+ ++....|.+++++||+. +
T Consensus 289 d~l~~~fgg~----------~~pa~Gf~igieRl~~~l~e~~~~~~~-~~p~~v~i~~~~-~~~~~~a~~l~~~Lr~~-i 355 (421)
T 1h4v_B 289 DGLSELLGGP----------RVPGVGFAFGVERVALALEAEGFGLPE-EKGPDLYLIPLT-EEAVAEAFYLAEALRPR-L 355 (421)
T ss_pred HHHHHHhCCC----------CCCeEEEeecHHHHHHHHHhcCcCCCC-CCCCeEEEEECC-hHHHHHHHHHHHHHHhc-C
Confidence 9999988654 359999999999999988643 22222 467889999985 56788999999999999 9
Q ss_pred eEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHH
Q 001059 1094 KAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1094 ~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l 1159 (1170)
+|++++. ++++++++++|++.|+|++|++|++|+++|+|+||++.+++|..++++++++++++.|
T Consensus 356 ~v~~d~~-~~~~~~~~~~a~~~g~p~~iivG~~e~~~~~v~vk~~~~~~~~~v~~~el~~~l~~~l 420 (421)
T 1h4v_B 356 RAEYALA-PRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQAL 420 (421)
T ss_pred EEEEecC-CCCHHHHHHHHHhCCCCEEEEECchHhhcCcEEEEECCCCCceEECHHHHHHHHHHhh
Confidence 9998876 6799999999999999999999999999999999999999999999999999987764
No 9
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A*
Probab=100.00 E-value=7.8e-57 Score=535.76 Aligned_cols=397 Identities=16% Similarity=0.197 Sum_probs=296.1
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-C---cccccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-C---PQFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~---~~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+.|+|++||+|.+++.+++|++.++++|++|||++|.||+| .+... | +...++||+|.|++|+.++||||+|
T Consensus 5 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~~D~~g~~l~Lrpd~t 84 (423)
T 1htt_A 5 QAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGT 84 (423)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEEHHHHHHHHCSSSHHHHHTCEEEECTTSCEEEECSCSH
T ss_pred CCCCCccccCHHHHHHHHHHHHHHHHHHHHcCCEEecccccCHHHHHhhccCCchhhhhhheEEEEcCCCCEEEeCCCch
Confidence 57899999999999999999999999999999999999999 23222 3 3467899999999999999999999
Q ss_pred HHHHHHHHhC---CCCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCC-CcceEEE
Q 001059 785 LPFIRWAISN---QKSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFH-AESCDIH 859 (1170)
Q Consensus 785 ~~iaR~~~~~---~~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi-~~~~~i~ 859 (1170)
+|+||+++++ +..|+|+||+|+|||+|+|+.+| |||+|+|+|+||.+++.+|+|+|.++.++|+++|+ .+ +.|+
T Consensus 85 ~~~aR~~~~~~~~~~~P~rl~~~g~vfR~e~p~~gR~Ref~Q~d~e~~g~~~~~ad~e~i~~~~~~l~~lgl~~~-~~i~ 163 (423)
T 1htt_A 85 AGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEH-VTLE 163 (423)
T ss_dssp HHHHHHHHHHTCSTTCCEEEEEEEEEECCCCCCSSCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHHTCGGG-CEEE
T ss_pred HHHHHHHHhcccccCCCeEEEEEcCEecCCCCCCCccceeEEeeEEEECCCCchhhHHHHHHHHHHHHHCCCCCC-cEEE
Confidence 9999999864 35699999999999999988655 56999999999999999999999999999999999 65 9999
Q ss_pred eCcHHHHHHHHHHhCCCHHHHHHHHHHHHH-hcCCCCCcccccchHHHHHHHHHHHcCCc--HHHHHHHHHHHHHhcCCh
Q 001059 860 LNHGDLLEAIWSWAGIKAEHREKVAELLAM-MGSLRPQSSEWKSKWVVIRRQLLQELNLA--EAVVNRLQTVGLRFCGAA 936 (1170)
Q Consensus 860 lg~~~il~~~l~~lgl~~~~~~~l~~~l~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~l~~l~~~~~g~~ 936 (1170)
|||++....... .+..+..++.. .+.+. ......+ ...++. ......+.+++. +
T Consensus 164 i~~~g~~~~~~~-------~~~~l~~~l~~~~~~~~----------~~~~~~l-~~~~l~~l~~~~~~~~~~l~---~-- 220 (423)
T 1htt_A 164 LNSIGSLEARAN-------YRDALVAFLEQHKEKLD----------EDCKRRM-YTNPLRVLDSKNPEVQALLN---D-- 220 (423)
T ss_dssp EEECCCHHHHHH-------C------------------------------------------------------------
T ss_pred EcCCCChhhHHH-------HHHHHHHHHHHHHhccC----------HHHHHHH-HhchhHhhhcccHHHHHHHh---c--
Confidence 999653221100 01111111111 00000 0000000 000000 000000111110 0
Q ss_pred hhHHHHHhccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 937 DQALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 937 ~~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
..++...+ .....+.++++ ++..+|+ .+.+|++++||++||||+||+++..+.+ ...+||+||||
T Consensus 221 ---~~~l~~~l--~~~~~~~l~~~~~~l~~~g~--~i~~D~~l~rg~~YYtg~vFe~~~~~~g------~~~~v~~GGRY 287 (423)
T 1htt_A 221 ---APALGDYL--DEESREHFAGLCKLLESAGI--AYTVNQRLVRGLDYYNRTVFEWVTNSLG------SQGTVCAGGRY 287 (423)
T ss_dssp ----------C--CHHHHHHHHHHHHHHHTTTC--CCEECTTCCCSSTTCCSEEEEEECC----------CCEEEEEEEC
T ss_pred ---chHHHhhh--hHHHHHHHHHHHHHHHHcCC--eEEEccccccchHHHcCceEEEEeCCCC------CcCCcCCCccH
Confidence 01111111 23344555555 6677776 6999999999999999999999865422 34589999999
Q ss_pred chhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC-CCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHc--
Q 001059 1015 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV-DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE-- 1091 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~-~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~-- 1091 (1170)
|+|++.||++ +.||||||||+|||+.+|.+ +..++ ..++.+|+|++.+ ++...+|.+++++||+.
T Consensus 288 D~l~~~fgg~----------~~pavGf~igveRl~~~l~e~~~~~~-~~~p~~v~i~~~~-~~~~~~a~~l~~~Lr~~~~ 355 (423)
T 1htt_A 288 DGLVEQLGGR----------ATPAVGFAMGLERLVLLVQAVNPEFK-ADPVVDIYLVASG-ADTQSAAMALAERLRDELP 355 (423)
T ss_dssp TTHHHHTTSC----------CCCEEEEEEEHHHHHHHHHHHSTTCC-CCCSCSEEEEECS-TTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHhCCC----------CCCeEEEEecHHHHHHHHHhcCcCCC-CCCCCcEEEEEcC-HHHHHHHHHHHHHHHcCCC
Confidence 9999998643 46999999999999988863 33322 2367799999986 56789999999999999
Q ss_pred CCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHH
Q 001059 1092 NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1092 Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l 1159 (1170)
|++|++++. ++++++++++|++.|+|++|++|++|+++|+|+||++.+++|..++++++++++++.+
T Consensus 356 Gi~v~~d~~-~~~~~~~~~~a~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~~~~v~~~el~~~l~~~~ 422 (423)
T 1htt_A 356 GVKLMTNHG-GGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLRTLL 422 (423)
T ss_dssp TCCEEECCS-CCCHHHHHHHHHHHTCSEEEEECHHHHHHTEEEEEETTTCCEEEEEHHHHHHHHHHHH
T ss_pred CcEEEEeCC-CCCHHHHHHHHHHcCCCEEEEECchhhhcCeEEEEECCCCCceEEcHHHHHHHHHHhh
Confidence 999998876 5799999999999999999999999999999999999999999999999999998764
No 10
>3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=100.00 E-value=3.6e-54 Score=500.25 Aligned_cols=304 Identities=19% Similarity=0.185 Sum_probs=257.3
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCCCcccc-cceEEEeccCCceeeecCCCCHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFK-RNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~-~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
+.|+|++||+|.++..+++|++.++++|++|||++|.||+| .+...++... ++||+|.|++|+.++||||+|+|+
T Consensus 24 ~~p~G~~d~lP~~~~~~~~i~~~i~~~f~~~Gy~eI~tP~le~~el~~~~g~~~~~~~my~~~D~~g~~l~LRpd~T~~~ 103 (373)
T 3rac_A 24 DRPPGMQDGYPDFAKRRRAVETRLLSFVEDAGYEPVTSGLFEYVDTLLRARSPESSRDWIRLFDGGGDAVALRPEMTPSI 103 (373)
T ss_dssp CCCTTCCCCCTTHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHTTSCTTSCCCCCBCCCCSSSCEEECSSSHHHH
T ss_pred CCCCCccccCHHHHHHHHHHHHHHHHHHHHcCCeEEECCceeeHHHHhhcCCccchhceEEEECCCCCEEEECCcCHHHH
Confidence 67899999999999999999999999999999999999999 3333466677 899999999999999999999999
Q ss_pred HHHHHhC---CCCceeEEEecCeEEcCCC------CC-CCCceeEeEEEEeCCC-CcccHHHHHHHHHHHHHHcCCCcce
Q 001059 788 IRWAISN---QKSSFKRYEISSVYRRAIG------HS-PPNRYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESC 856 (1170)
Q Consensus 788 aR~~~~~---~~~P~r~~Y~g~VfR~e~~------~~-~~~ef~Q~GvEiiG~~-~~~aDaEvi~la~~~l~~lgi~~~~ 856 (1170)
||+++++ ...|+|+||+|+|||+|++ +. +.|||+|+|+|+||.+ ++.+|+|+|.++.++|+.+|+.+ +
T Consensus 104 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~g~~~~~~~gR~ReF~Q~g~ei~g~~d~~~aDaEvi~l~~~~l~~lgl~~-~ 182 (373)
T 3rac_A 104 ARMAAPRVAAGRTPIRWCYCERVYRRTDDPASLSWASGKAAESTQVGIERIGEEASVDVDMDVLRLLHEASAAAGVRH-H 182 (373)
T ss_dssp HHHHHHHHHTTCCCCEEEEEEEEEECC------------CEEEEEEEEEECSSCCCHHHHHHHHHHHHHHHHHHTCCS-C
T ss_pred HHHHHhccccCCCCeEEEEEcceEccCCCcccccccCCccceeEEeeeEEECCCCCHHHHHHHHHHHHHHHHHcCCCc-e
Confidence 9999874 4579999999999999988 64 4456999999999999 88999999999999999999975 9
Q ss_pred EEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcC--
Q 001059 857 DIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG-- 934 (1170)
Q Consensus 857 ~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g-- 934 (1170)
+|+|||+++++++++.+|+++++++.++++++++| +.++.++..++ +++.++.+..++ .+.|
T Consensus 183 ~i~l~~~~i~~~ll~~~g~~~~~~~~l~~~l~k~~---------~~~~~~~~~~l------~~~~~~~l~~l~-~l~g~~ 246 (373)
T 3rac_A 183 RIVVSHARLVPRLLDALGISASLSRAFLACLTSGN---------YVQFRELWQLH------AAKDVDLLANLL-TWSPAE 246 (373)
T ss_dssp EEEEEETTHHHHHHHHTTCCHHHHHHHHHHHHHTC---------HHHHHHHHHHH------CSCCSCHHHHHH-HBCCCS
T ss_pred EEEecCHHHHHHHHHHcCCCHHHHHHHHHHHHhcC---------hhhHHHHHHhc------CHHHHHHHHHHH-HHhCCc
Confidence 99999999999999999999999999999999988 34444443333 334456666776 4666
Q ss_pred ---------ChhhHHHHHhccCCCChhH----HHHHHHH-----HHHHccC-cceEEEccCCCCCCCcccceEEEEEecc
Q 001059 935 ---------AADQALPRLRGALPADKPT----RKALDEL-----YLRIWRI-EKNIYIDALMPPIESYHRNLFFQVFSVK 995 (1170)
Q Consensus 935 ---------~~~~~l~~l~~~~~~~~~~----~~~l~~L-----~l~~~g~-~~~i~~Dl~lvrgldYYtG~VFe~~~~~ 995 (1170)
+..++++++..+.. ++.. .+++++| +|+.+|+ .+++.||++++||++||||+|||+|..+
T Consensus 247 ~~~~~~~~~~~~~~l~~~~~l~~-~~~~~~~~~~al~~l~~l~~~L~~~gi~~~~i~~D~~lvRgldYYTG~vFe~~~~~ 325 (373)
T 3rac_A 247 RDAAKRSREASDRELEALLRDAV-DPRAAADVRDAWRYLCRLAEALHDSGLASDVVTFDLALHRELDYYTGLVFEMFAPG 325 (373)
T ss_dssp SCTTSBCHHHHHHHHHHHHTTCS-CHHHHHHHHHHHHHHHHHHHHHHHHTCCTTTEEECTTCCCSCTTCCSEEEEEECTT
T ss_pred cccccccccccHHHHHHHHhhhc-CcccchhHHHHHHHHHHHHHHHHHcCCCCceEEEeCCccCCCCccCCeEEEEEECC
Confidence 14678888888544 4444 6666666 7888899 7889999999999999999999999876
Q ss_pred CCCcccccccceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhcc
Q 001059 996 EKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP 1053 (1170)
Q Consensus 996 ~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~ 1053 (1170)
.+. +||+|||||+|++.||+ ++||||||+|+|||+.+|+
T Consensus 326 ~g~--------~i~~GGRYD~L~~~fG~-----------~~pAvGFaiglerL~~~l~ 364 (373)
T 3rac_A 326 VGA--------PIAQGGRYDELLAQFGA-----------GAPAVGFAFEVERVMAVLE 364 (373)
T ss_dssp CSS--------CSEEEEECTTTTGGGTC-----------CCCCEEEEEEHHHHHHHHH
T ss_pred CCC--------eEeecccccHHHHhhCC-----------CCCeEEEEEEHHHHHHHHH
Confidence 543 79999999999998865 2699999999999998886
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-53 Score=476.63 Aligned_cols=260 Identities=26% Similarity=0.422 Sum_probs=205.7
Q ss_pred CCCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEee
Q 001059 347 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFE 425 (1170)
Q Consensus 347 ~~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e 425 (1170)
.++.+..+++|++++.||+|+||+||+|+++.+|+.||||+++..... ......+.+|+.+|+.++|||||+++++|.+
T Consensus 5 ~l~~G~~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~ 84 (275)
T 3hyh_A 5 SLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS 84 (275)
T ss_dssp ---------CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCCCCCEeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence 344455678999999999999999999999999999999999765432 2345679999999999999999999998832
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|||||||+|+|.+.+.+.+.+++.+++.++.||+.|
T Consensus 85 ----------------------------------------~~~~~ivmEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~a 124 (275)
T 3hyh_A 85 ----------------------------------------KDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 124 (275)
T ss_dssp ----------------------------------------SSEEEEEEECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CCEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|+|||++||+||||||+|||++.++++||+|||+|+...... ..++.+||+.|||||++.+...
T Consensus 125 l~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~----------------~~~~~~GT~~Y~APE~~~~~~y 188 (275)
T 3hyh_A 125 VEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----------------FLKTSCGSPNYAAPEVISGKLY 188 (275)
T ss_dssp HHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-------------------------------CTTSCHHHHSSSSC
T ss_pred HHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC----------------ccCCeeECcccCChhhhcCCCC
Confidence 999999999999999999999999999999999998653221 1245689999999999998555
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
++.++||||+||++|||++ ||......+....+......+| ...++++++||++||+.||++|||++|+++|||
T Consensus 189 ~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw 265 (275)
T 3hyh_A 189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP---KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHH
T ss_pred CCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCChhHCcCHHHHHcCcc
Confidence 6789999999999999997 8987766665555554444444 346789999999999999999999999999999
Q ss_pred CCC
Q 001059 663 PPQ 665 (1170)
Q Consensus 663 ~~~ 665 (1170)
|+.
T Consensus 266 ~k~ 268 (275)
T 3hyh_A 266 FKV 268 (275)
T ss_dssp HHT
T ss_pred ccc
Confidence 864
No 12
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.7e-53 Score=478.92 Aligned_cols=284 Identities=37% Similarity=0.713 Sum_probs=215.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+||+++|++++.||+|+||+||+|+++.+|+.||||+++... .....+.+.+|+.+|++++|||||+++++|.+.....
T Consensus 1 GR~l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~ 79 (299)
T 4g31_A 1 GRYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTE 79 (299)
T ss_dssp CHHHHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---
T ss_pred CCcchhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccc
Confidence 478899999999999999999999999999999999998654 3344567999999999999999999999997642100
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC---CCHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qI~~gL 506 (1170)
. ........++|||||||+ |+|.+++..... .++..++.++.||+.||
T Consensus 80 ~----------------------------~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al 131 (299)
T 4g31_A 80 K----------------------------LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131 (299)
T ss_dssp -----------------------------------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHH
T ss_pred c----------------------------ccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHH
Confidence 0 000123457899999996 599999987654 45677899999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++|||||||||+|||++.++++||+|||+|+.+........... ........++.+||+.|||||++.+ ..|
T Consensus 132 ~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~---~~~~~~~~~~~~GT~~YmAPE~~~~-~~y 207 (299)
T 4g31_A 132 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT---PMPAYARHTGQVGTKLYMSPEQIHG-NSY 207 (299)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-----------------------------CCCTTSCHHHHTT-CCC
T ss_pred HHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCcccccccc---ccccccccCCcccCccccCHHHHcC-CCC
Confidence 999999999999999999999999999999999998754332111100 0011123456789999999999998 579
Q ss_pred CccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 587 DEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+.++|||||||++|||++||....+.......+. ....|+.+...++.+.+||++||++||.+|||+.++|+|+||+..
T Consensus 208 ~~~~DiwSlGvilyell~Pf~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 208 SHKVDIFSLGLILFELLYPFSTQMERVRTLTDVR-NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp CTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHH-TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred CCHHHHHHHHHHHHHHccCCCCccHHHHHHHHHh-cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 9999999999999999999987665444443333 556777777778889999999999999999999999999999887
Q ss_pred hH
Q 001059 667 EY 668 (1170)
Q Consensus 667 ~~ 668 (1170)
.+
T Consensus 287 ~~ 288 (299)
T 4g31_A 287 DF 288 (299)
T ss_dssp --
T ss_pred CC
Confidence 54
No 13
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1
Probab=100.00 E-value=1.8e-52 Score=497.75 Aligned_cols=395 Identities=16% Similarity=0.185 Sum_probs=291.9
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC----CcccccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD----CPQFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~----~~~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+.|+|++||+|.++.+++.|++.++++|.+|||++|.||+| .+... .+...++||+|.|++|+.++||||+|
T Consensus 3 ~~~~G~~~~~p~~~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~~~g~~~~~~~~~m~~~~D~~g~~~~Lrp~~t 82 (420)
T 1qe0_A 3 KIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGT 82 (420)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHCC-----------CCEEECHHHHCCEEECSCSH
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHHHHcCCEEccCcccchHHHhhhccCCccchhhhheEEEEcCCCCEEEeCCCCh
Confidence 56899999999999999999999999999999999999999 23222 23567899999999999999999999
Q ss_pred HHHHHHHHhC-----CCCceeEEEecCeEEcCCCCCC-CCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEE
Q 001059 785 LPFIRWAISN-----QKSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 858 (1170)
Q Consensus 785 ~~iaR~~~~~-----~~~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i 858 (1170)
++++|+++++ ...|+|+||+|+|||+|+|+.+ .|||+|+|+|+||.+++.+|+|+|.++.++|+.||+.+ ++|
T Consensus 83 ~~~~r~~~~~~~~~~~~lP~r~~~~g~vfR~E~~~~gR~reF~q~~~e~~~~~~~~~d~e~i~~~~~~l~~lgl~~-~~i 161 (420)
T 1qe0_A 83 AAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKH-LKL 161 (420)
T ss_dssp HHHHHHHHHTTGGGCSSCSEEEEEEEEEECC-------CCEEEEEEEEEESCCCHHHHHHHHHHHHHHHHHTTCCC-EEE
T ss_pred HHHHHHHHhccccccCCCCeEEEEecCEeecCCCcCCCcccEEEeeEEEECCCCchhHHHHHHHHHHHHHHcCCCc-eEE
Confidence 9999999864 3569999999999999988754 45799999999999999999999999999999999985 999
Q ss_pred EeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHh---cC-
Q 001059 859 HLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF---CG- 934 (1170)
Q Consensus 859 ~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~---~g- 934 (1170)
.|||.+....- +..++.+..++.... ..+++...+.+...+..+ .+
T Consensus 162 ~l~~~g~~~~~-------~~~~~~l~~~~~~~~-----------------------~~l~~~~~~~l~~~~~~~l~~~~~ 211 (420)
T 1qe0_A 162 VINSVGDMASR-------KEYNEALVKHFEPVI-----------------------HEFCSDCQSRLHTDPMRILDCKVD 211 (420)
T ss_dssp EEEECCCHHHH-------HHHHHHHHHHHGGGG-----------------------GGSCHHHHHTTTTCGGGGC-----
T ss_pred EEcccCchhhH-------HHHHHHHHHHHHHHH-----------------------hhhCHHHHHHHHhcchhhhcccch
Confidence 99995422110 011112222222110 001111111000000000 00
Q ss_pred ChhhHHHHHhccCC-CChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccc
Q 001059 935 AADQALPRLRGALP-ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1011 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~-~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~G 1011 (1170)
...++++.+..+.. .+....+.++.| +++.+|+ .+.+|++++|+++||||+||+++..+.. ..+.+++|++|
T Consensus 212 ~~~~~~~~a~~l~~~l~~~~~~~l~~l~~~l~~~gi--~~~~d~~l~rg~~yYtg~vfe~~~~~~~---~~g~~~~i~~G 286 (420)
T 1qe0_A 212 RDKEAIKTAPRITDFLNEESKAYYEQVKAYLDDLGI--PYTEDPNLVRGLDYYTHTAFELMMDNPN---YDGAITTLCGG 286 (420)
T ss_dssp -------CCCCGGGCCCTTHHHHHHHHHHHHHHHTC--CCEECTTCCCCCTTEEEEEEEEEEECTT---STTSEEEEEEE
T ss_pred hHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHcCC--eEEECcccccchhhhcCeEEEEEEcCCC---CCCCcCccccC
Confidence 00111111111000 123455666666 6777887 5899999999999999999999987540 01223589999
Q ss_pred cccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC-CCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHH
Q 001059 1012 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV-DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE 1090 (1170)
Q Consensus 1012 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~-~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~ 1090 (1170)
||||+|++.||++ .+|||||++|+|||+.+|++ +...+. .++.+|+|++.+ +....+|.++++.||+
T Consensus 287 gRYd~l~~~~g~~----------~~P~vg~~igveRl~~~le~~~~~~p~-~~p~~v~i~~~~-~~~~~~a~~l~~~Lr~ 354 (420)
T 1qe0_A 287 GRYNGLLELLDGP----------SETGIGFALSIERLLLALEEEGIELDI-EENLDLFIVTMG-DQADRYAVKLLNHLRH 354 (420)
T ss_dssp EEEESHHHHTTCC----------CCEEEEEEEEHHHHHHHHHHTTCCCCC-CCCCSEEEEECH-HHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHhCCC----------CCCEEEEEecHHHHHHHHHhcCCCCCC-CCCCeEEEEEeC-HHHHHHHHHHHHHHHH
Confidence 9999999988654 36999999999999998863 222222 567889999885 5677899999999999
Q ss_pred cCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHH
Q 001059 1091 ENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1156 (1170)
Q Consensus 1091 ~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~ 1156 (1170)
.|++|++++. ++++++++++|++.|+|++|+||++|+++|+|+||++.+++|..|++++++++++
T Consensus 355 ~Gi~v~~d~~-~~~~~~~~~~a~~~g~p~~iiig~~e~~~~~v~vk~~~~~~~~~v~~~~l~~~l~ 419 (420)
T 1qe0_A 355 NGIKADKDYL-QRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFK 419 (420)
T ss_dssp TTCCEEECCS-CCCHHHHHHHHHHTTCSEEEEECHHHHHHTCEEEEETTTCCEEEECTTHHHHHHH
T ss_pred CCCEEEEecC-CCCHHHHHHHHHHcCCCEEEEECcchhhcCeEEEEECCCCCeEEEcHHHHHHHHh
Confidence 9999998875 5799999999999999999999999999999999999999999999999998874
No 14
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.8e-53 Score=481.14 Aligned_cols=262 Identities=28% Similarity=0.461 Sum_probs=226.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++++.||+|+||+||+|+++.+|+.||||+++.... .....+.+.+|+.+|+.++|||||+++++|.
T Consensus 29 ~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~------ 102 (311)
T 4aw0_A 29 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ------ 102 (311)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE------
T ss_pred CCccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE------
Confidence 345789999999999999999999999999999999975421 1223567999999999999999999999883
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
+..++|||||||+ |+|.+++.+.+.+++.+++.++.||+.||+||
T Consensus 103 ----------------------------------~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~yl 148 (311)
T 4aw0_A 103 ----------------------------------DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148 (311)
T ss_dssp ----------------------------------CSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------eCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3467899999997 59999999999999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|||||||||+|||++.++++||+|||+|+.+.... ......+.+||+.|||||++.+ ..|+.+
T Consensus 149 H~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~-------------~~~~~~~~~GTp~YmAPEvl~~-~~y~~~ 214 (311)
T 4aw0_A 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-------------KQARANSFVGTAQYVSPELLTE-KSACKS 214 (311)
T ss_dssp HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT-------------TCCCBCCCCSCGGGCCHHHHHH-SCBCHH
T ss_pred HHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC-------------CcccccCcccCcccCCHHHHcC-CCCCcH
Confidence 99999999999999999999999999999998764221 0112356799999999999998 569999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH------HHhc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE------LLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e------iL~~ 660 (1170)
+|||||||+||||++ ||......+....+......+|. ..++++++||++||++||.+|||++| |++|
T Consensus 215 ~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~---~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~H 291 (311)
T 4aw0_A 215 SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE---KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 291 (311)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT---TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCC
Confidence 999999999999997 99887777777777666555554 46789999999999999999999987 6899
Q ss_pred cCCCCchHHH
Q 001059 661 ALPPQMEYEL 670 (1170)
Q Consensus 661 ~~~~~~~~~~ 670 (1170)
|||....|+.
T Consensus 292 p~F~~idw~~ 301 (311)
T 4aw0_A 292 PFFESVTWEN 301 (311)
T ss_dssp GGGTTCCCTT
T ss_pred CCcCCCCHHH
Confidence 9999887653
No 15
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4e-52 Score=468.85 Aligned_cols=254 Identities=24% Similarity=0.382 Sum_probs=215.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|++.++||+|+||+||+|+++.+|..||||++..........+.+.+|+.+|++++|||||+++++|....
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--------- 98 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV--------- 98 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE---------
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc---------
Confidence 46778899999999999999999999999999876666666778999999999999999999999985421
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG-- 513 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g-- 513 (1170)
....++|||||||+ |+|.+++.+.+.+++..++.++.||+.||+|||++|
T Consensus 99 ---------------------------~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~ 151 (290)
T 3fpq_A 99 ---------------------------KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPP 151 (290)
T ss_dssp ---------------------------TTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred ---------------------------CCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 12467899999997 599999999899999999999999999999999999
Q ss_pred ccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 514 IIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 514 IiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||||||||+||||+. ++++||+|||+|+..... ..++.+|||.|||||++.+ .|+.++||
T Consensus 152 IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-----------------~~~~~~GTp~YmAPE~~~~--~y~~~~Di 212 (290)
T 3fpq_A 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-----------------FAKAVIGTPEFMAPEMYEE--KYDESVDV 212 (290)
T ss_dssp CCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-----------------SBEESCSSCCCCCGGGGGT--CCCTHHHH
T ss_pred EEecccChhheeEECCCCCEEEEeCcCCEeCCCC-----------------ccCCcccCccccCHHHcCC--CCCcHHHH
Confidence 999999999999985 799999999999853211 1245689999999999976 49999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
|||||+||||+| ||............+......+......++++++||.+||+.||++|||+.++|+||||++
T Consensus 213 wSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 213 YAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 999999999997 8876555554444444332223344556789999999999999999999999999999975
No 16
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.5e-53 Score=485.15 Aligned_cols=255 Identities=31% Similarity=0.591 Sum_probs=217.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|+++++||+|+||+||+|+++.+|+.||||+++.........+.+.+|+.+|++++|||||+++++|.+
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-------- 94 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-------- 94 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE--------
Confidence 579999999999999999999999999999999998776666667889999999999999999999999843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|||||||+ |+|.+++... ..+++.+++.|+.||+.||+|||
T Consensus 95 --------------------------------~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH 142 (350)
T 4b9d_A 95 --------------------------------NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142 (350)
T ss_dssp --------------------------------TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999997 5999999754 35799999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|||||||||+||||+.++++||+|||+|+.+.... ...++.+||+.|||||++.+ ..|+.++
T Consensus 143 ~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GT~~YmAPE~l~~-~~y~~~~ 206 (350)
T 4b9d_A 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV---------------ELARACIGTPYYLSPEICEN-KPYNNKS 206 (350)
T ss_dssp HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH---------------HHHHHHHSCCTTCCHHHHTT-CCCCHHH
T ss_pred HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc---------------ccccccCCCccccCHHHHCC-CCCCcHH
Confidence 9999999999999999999999999999998764221 01245689999999999998 5699999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||||||+||||++ ||......+....+.. +.+|+.+...++++++||.+||++||.+|||++++|+|||+.+.
T Consensus 207 DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 207 DIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS--GSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc--CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 99999999999997 9988777776666654 34455566788999999999999999999999999999998654
No 17
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.6e-52 Score=479.87 Aligned_cols=253 Identities=23% Similarity=0.417 Sum_probs=218.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.|+++++||+|+||+||+|+++.+|+.||||+++..... ..+.+.+|+.+|+.++|||||+++++|.+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--------- 142 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLV--------- 142 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS--SGGGGHHHHHHHHHCCCTTBCCEEEEEEE---------
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEE---------
Confidence 5799999999999999999999999999999999865433 24568899999999999999999999843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|||||||+| +|.+++.. ..+++.+++.++.||+.||+|||++|
T Consensus 143 -------------------------------~~~~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~ 190 (346)
T 4fih_A 143 -------------------------------GDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 190 (346)
T ss_dssp -------------------------------TTEEEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4678999999974 89988865 57999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
||||||||+||||+.++++||+|||+|+.+.... ...++.+||+.|||||++.+ ..|+.++|||
T Consensus 191 IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiW 254 (346)
T 4fih_A 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPELISR-LPYGPEVDIW 254 (346)
T ss_dssp EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHHHHH
T ss_pred cccccCCHHHEEECCCCCEEEecCcCceecCCCC---------------CcccccccCcCcCCHHHHCC-CCCCcHHHHH
Confidence 9999999999999999999999999998653221 11356799999999999987 5699999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||++|||++ ||......+....+........+.+...++++++||.+||+.||++|||++|+|+||||.+.
T Consensus 255 SlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~ 330 (346)
T 4fih_A 255 SLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 330 (346)
T ss_dssp HHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCC
Confidence 99999999997 88877666655554443333445667788999999999999999999999999999999764
No 18
>1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A*
Probab=100.00 E-value=1.7e-52 Score=482.02 Aligned_cols=298 Identities=16% Similarity=0.239 Sum_probs=253.6
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc----CCCcccccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL----GDCPQFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~----~~~~~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+.|+|++||+|.++..+++|++.++++|++|||++|.||+| .+. +.++...++||+|.|++|+.++||||+|
T Consensus 23 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~Gy~eI~tP~le~~el~~~s~~g~~~~~~~~my~~~D~~g~~l~LRpd~T 102 (344)
T 1z7m_A 23 LLPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQFIKHEGQSITLRYDFT 102 (344)
T ss_dssp CCCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHHHHCSSSCCCTTSCCEEECTTCCEEEECCCSH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHHHHHHHcCCEEecCcccCcHHHHhhccCCccccccccEEEEECCCCCEEecCCCCc
Confidence 57899999999999999999999999999999999999999 232 3466788999999999999999999999
Q ss_pred HHHHHHHHhCC-CCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCc
Q 001059 785 LPFIRWAISNQ-KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 862 (1170)
Q Consensus 785 ~~iaR~~~~~~-~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~ 862 (1170)
+|+||+++++. ..|+|+||+|+|||+|+|+.++ |||+|+|+|+||.+++.+|+|+|.++.++|+.+|+.+ ++|+|||
T Consensus 103 ~~~aR~~~~~~~~~P~rl~y~g~vfR~e~p~~gR~REF~Q~g~ei~g~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~l~~ 181 (344)
T 1z7m_A 103 LPLVRLYSQIKDSTSARYSYFGKIFRKEKRHKGRSTENYQIGIELFGESADKSELEILSLALQVIEQLGLNK-TVFEIGS 181 (344)
T ss_dssp HHHHHHHHTCCSCCCEEEEEEEECCCCCC-------CCEEEEEEEESSCHHHHHHHHHHHHHHHHHHHTCSS-EEEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEECcEEccCCCCCCCcceeEEEEEEEEcCCCcHHHHHHHHHHHHHHHHCCCCc-EEEEECC
Confidence 99999999874 4699999999999999988654 5699999999999999999999999999999999985 9999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
++++++++ |++++.+..++++++++++. ++ ++++.+.+++++.++.+..++ .+ |+ .++++.
T Consensus 182 ~gi~~~~l---g~~~~~~~~l~~~l~~~~~~------------~~-~~~l~~~~l~~~~~~~l~~l~-~~-g~-~~~l~~ 242 (344)
T 1z7m_A 182 AKFFQRLC---QLADGSTELLTELLLKKDLS------------GL-NAFIEKNNFSKELRGLLKEIF-IT-NE-LSRLEN 242 (344)
T ss_dssp HHHHHHHH---HHTTTCHHHHHHHHHTTCHH------------HH-HHHHTTSCCCHHHHHHHHHHT-TC-CC-HHHHHH
T ss_pred HHHHHHHh---CCCHHHHHHHHHHHHhhCHH------------HH-HHHHHhcCCCHHHHHHHHHHH-hc-CC-HHHHHH
Confidence 99999988 67777888899999887732 12 445556789999999999998 45 66 478888
Q ss_pred HhccCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchh
Q 001059 943 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1017 (1170)
Q Consensus 943 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1017 (1170)
+..+.. +....+++++| +|+.+| ++.||++++||++||||+|||+|..+.+ .+||+|||||+|
T Consensus 243 ~~~l~~-~~~~~~~l~~l~~l~~~L~~~g---~~~~D~~lvrgldYYtG~vFe~~~~~~~--------~~i~~GGRYD~L 310 (344)
T 1z7m_A 243 LVTNTK-DDVLISSFDQLKEFSEKLSMIK---PIIIDLGMVPKMDYYTDLMFKAYSSAAN--------QPILSGGRYDQL 310 (344)
T ss_dssp HHHHTT-CHHHHHHHHHHHHHHHHHTTTS---CCEECTTCCCSSTTCCSEEEEEEETTEE--------EEEEEEEECHHH
T ss_pred HHHhhc-chhhHHHHHHHHHHHHHHhhCC---CEEEeCCCCCCCccCCCeEEEEEECCCC--------CeEeeCccHHHH
Confidence 887553 45566666666 566666 7999999999999999999999986533 389999999999
Q ss_pred hhhcccccccccCCCCCCCCceEEeccHHHHHhhcc
Q 001059 1018 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP 1053 (1170)
Q Consensus 1018 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~ 1053 (1170)
++.|| + ++||||||+|+|||+.+|+
T Consensus 311 ~~~fg-~----------~~pavGfaiglerl~~~l~ 335 (344)
T 1z7m_A 311 LSNFQ-E----------EAFAIGFCCHMDTILKALE 335 (344)
T ss_dssp HHTSS-S----------CCCCEEEEEEHHHHHHHHH
T ss_pred HHHhC-C----------CCCeEEEEEEHHHHHHHHH
Confidence 99886 2 4699999999999998875
No 19
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=7.5e-52 Score=469.07 Aligned_cols=258 Identities=28% Similarity=0.422 Sum_probs=215.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++++.||+|+||+||+|++. .+++.||||+++..........++.+|+.+|++++|||||+++++|.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------ 97 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT------ 97 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE------
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE------
Confidence 68999999999999999999984 468899999997544333334468899999999999999999998843
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|||||||+ |+|.+++.+.+.+++.+++.++.||+.||+|||
T Consensus 98 ----------------------------------~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH 143 (304)
T 3ubd_A 98 ----------------------------------EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143 (304)
T ss_dssp ----------------------------------TTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999997 599999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|||||||||+|||++.++++||+|||+|+...... ...++.+||+.|||||++.+ ..|+.++
T Consensus 144 ~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GT~~YmAPE~~~~-~~y~~~~ 207 (304)
T 3ubd_A 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------KKAYSFCGTVEYMAPEVVNR-RGHTQSA 207 (304)
T ss_dssp HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--------------------CCCCSCCCCGGGCCHHHHHT-SCCCTHH
T ss_pred HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC---------------ccccccccCcccCCHHHhcc-CCCCCCC
Confidence 9999999999999999999999999999998643211 12345789999999999988 5699999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~ 662 (1170)
|||||||+||||++ ||......+....+......+| ...++++++||++||++||++||| ++|+++|||
T Consensus 208 DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~ 284 (304)
T 3ubd_A 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP---QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284 (304)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGG
T ss_pred cccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC---CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCcc
Confidence 99999999999997 9988777777666665544444 356789999999999999999998 589999999
Q ss_pred CCCchHHHH
Q 001059 663 PPQMEYELL 671 (1170)
Q Consensus 663 ~~~~~~~~~ 671 (1170)
|....|+.+
T Consensus 285 f~~idw~~l 293 (304)
T 3ubd_A 285 FSTIDWNKL 293 (304)
T ss_dssp GTTCCHHHH
T ss_pred ccCCCHHHH
Confidence 999887643
No 20
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.8e-51 Score=479.25 Aligned_cols=253 Identities=23% Similarity=0.417 Sum_probs=218.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.|+++++||+|+||+||+|+++.+|+.||||+++..... ..+.+.+|+.+|+.++|||||+++++|.+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--------- 219 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLV--------- 219 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--SGGGHHHHHHHHHHCCCTTBCCEEEEEEE---------
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCCCceEEEEEE---------
Confidence 6799999999999999999999999999999999865433 34568899999999999999999999843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|||||||+ |+|.+++.. ..+++.+++.++.||+.||+|||++|
T Consensus 220 -------------------------------~~~~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~ 267 (423)
T 4fie_A 220 -------------------------------GDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 267 (423)
T ss_dssp -------------------------------TTEEEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 457899999997 489888764 56999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
||||||||+||||+.+|++||+|||+|+.+.... ...++.+||+.|||||++.+ ..|+.++|||
T Consensus 268 IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiW 331 (423)
T 4fie_A 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPELISR-LPYGPEVDIW 331 (423)
T ss_dssp EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC---------------CCBCCCEECTTTCCHHHHTT-CCBCTHHHHH
T ss_pred eecccCCHHHEEEcCCCCEEEecCccceECCCCC---------------ccccccccCcCcCCHHHHCC-CCCCcHHHHH
Confidence 9999999999999999999999999998653221 12356799999999999988 5699999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||++|||++ ||......+....+........+.+...++++++||.+||+.||.+|||+.|+|+||||.+.
T Consensus 332 SlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 332 SLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407 (423)
T ss_dssp HHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence 99999999997 88877666655554443333344566788999999999999999999999999999999764
No 21
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-50 Score=474.15 Aligned_cols=267 Identities=25% Similarity=0.389 Sum_probs=222.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++++.||+|+||+||+|+++.+|+.||||+++..........++.+|+.+|+.++|||||++++++....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------- 126 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTV------- 126 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSS-------
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccc-------
Confidence 5799999999999999999999999999999999866555556678999999999999999999999874321
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
...+...+|||||||+|+|.+++...+.+++.+++.++.||+.||+|||++||
T Consensus 127 ---------------------------~~~~~~~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~i 179 (398)
T 4b99_A 127 ---------------------------PYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQV 179 (398)
T ss_dssp ---------------------------CTTTCCCEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ---------------------------ccccCCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence 01234678999999999999999998999999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
|||||||+|||++.++.+||+|||+|+.+...... .....++.+||+.|||||++.+...|+.++||||
T Consensus 180 iHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~-----------~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWS 248 (398)
T 4b99_A 180 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE-----------HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWS 248 (398)
T ss_dssp BCCCCCGGGEEECTTCCEEECCCTTCBCC------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHH
T ss_pred cCCCcCccccccCCCCCEEEeecceeeecccCccc-----------cccccccceeChHhcCHHHhcCCCCCCChhheeh
Confidence 99999999999999999999999999865322111 0112356799999999999988667899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC----------------------------ccccCCHHHHHHHHHc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP----------------------------SWVAKFSEQESLLRRL 643 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~----------------------------~~~~~~~e~~~LI~~~ 643 (1170)
+|||+|||++ ||.+....+....+....+..+. .+...++++.+||++|
T Consensus 249 lG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~m 328 (398)
T 4b99_A 249 VGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRM 328 (398)
T ss_dssp HHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHH
Confidence 9999999997 88777666655555443332221 1234578899999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCc
Q 001059 644 MSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|..||.+|||+.|+|+||||.+.
T Consensus 329 L~~dP~~R~ta~e~L~Hp~f~~~ 351 (398)
T 4b99_A 329 LRFEPSARISAAAALRHPFLAKY 351 (398)
T ss_dssp SCSSTTTSCCHHHHTTSGGGTTT
T ss_pred CcCChhHCcCHHHHhcCHhhCcC
Confidence 99999999999999999999865
No 22
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=7.5e-51 Score=466.41 Aligned_cols=249 Identities=24% Similarity=0.337 Sum_probs=206.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.+.|++.++||+|+||+||+|+++.+|+.||||+++.... ..+|+.+|+.++|||||+++++|.+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~-------- 121 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVRE-------- 121 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEE--------
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEE--------
Confidence 4679999999999999999999999999999999985432 2479999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|||||||+ |+|.+++...+.+++.+++.++.||+.||+|||++
T Consensus 122 --------------------------------~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~ 169 (336)
T 4g3f_A 122 --------------------------------GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169 (336)
T ss_dssp --------------------------------TTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 467899999997 59999999989999999999999999999999999
Q ss_pred CccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 GIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
|||||||||+||||+.++ ++||+|||+|+.+....... ........+||+.|||||++.+ ..|+.++|
T Consensus 170 ~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~----------~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~D 238 (336)
T 4g3f_A 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK----------SLLTGDYIPGTETHMAPEVVMG-KPCDAKVD 238 (336)
T ss_dssp TEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------------------CCCCCCGGGCCHHHHTT-CCCCTHHH
T ss_pred CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc----------ceecCCccccCccccCHHHHCC-CCCCcHHH
Confidence 999999999999999987 69999999998764322110 0112344689999999999998 56999999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||+||||++ ||......+....+.......+..+..+++++.+||.+||++||.+|||+.|+++|
T Consensus 239 iwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~ 310 (336)
T 4g3f_A 239 IWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRK 310 (336)
T ss_dssp HHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 9999999999997 88766555444444443332233445678899999999999999999999999654
No 23
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-48 Score=443.63 Aligned_cols=250 Identities=24% Similarity=0.354 Sum_probs=203.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.++||+|+||+||+|+++ ..||||+++....+....+.|.+|+.+|++++|||||++++++.+
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-------- 103 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-------- 103 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--------
Confidence 468899999999999999999875 359999998766666677889999999999999999999998621
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
..+|||||||+ |+|.+++... ..+++.++..++.||+.||+|||+
T Consensus 104 ---------------------------------~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~ 150 (307)
T 3omv_A 104 ---------------------------------DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 150 (307)
T ss_dssp ---------------------------------SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 24689999997 6999999754 579999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCCcc
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEK 589 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~~k 589 (1170)
++||||||||+||||+.++++||+|||+|+....... ....+..+||+.|||||++.+. ..|+.+
T Consensus 151 ~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~-------------~~~~~~~~GT~~ymAPE~l~~~~~~~y~~k 217 (307)
T 3omv_A 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-------------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQ 217 (307)
T ss_dssp TTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------------------------CCCCTTSCCHHHHHCCSSCCCCHH
T ss_pred CCccCCccCHHHEEECCCCcEEEeeccCceecccCCc-------------ceeecccccCCCccCHHHhhccCCCCCCcH
Confidence 9999999999999999999999999999986532210 1123456899999999999753 358999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC---CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~---p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||+||||+| ||............+...... +..+..+++++.+||.+||+.||++|||+.+|+++
T Consensus 218 sDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 294 (307)
T 3omv_A 218 SDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS 294 (307)
T ss_dssp HHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred HHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999997 887665555444444333222 23445678899999999999999999999998754
No 24
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.7e-48 Score=440.20 Aligned_cols=248 Identities=23% Similarity=0.347 Sum_probs=205.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|.+.++||+|+||+||+|++. .+|..||||+++. .+....++|.+|+.+|++++|||||+++++|.+
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--- 86 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD--ASDNARKDFHREAELLTNLQHEHIVKFYGVCVE--- 86 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC--CChHHHHHHHHHHHHHHhCCCCCCccEEEEEee---
Confidence 368999999999999999999975 3588999999864 344556789999999999999999999999843
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-------------CCCCHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------DHFDKEL 494 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------~~l~e~~ 494 (1170)
...+|||||||+ |+|.+++... ..+++.+
T Consensus 87 -------------------------------------~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~ 129 (299)
T 4asz_A 87 -------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129 (299)
T ss_dssp -------------------------------------SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHH
T ss_pred -------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHH
Confidence 356799999997 6999999754 3599999
Q ss_pred HHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccC
Q 001059 495 AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 574 (1170)
Q Consensus 495 ~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 574 (1170)
++.++.||++||+|||+++||||||||+|||++.++++||+|||+|+........ ......+||+.|
T Consensus 130 ~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~-------------~~~~~~~gt~~y 196 (299)
T 4asz_A 130 MLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY-------------RVGGHTMLPIRW 196 (299)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCE-------------EETTTEEECGGG
T ss_pred HHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCce-------------eecCceecChhh
Confidence 9999999999999999999999999999999999999999999999876432211 112345799999
Q ss_pred CCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCC
Q 001059 575 TAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 575 ~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
||||++.+ ..|+.++|||||||+||||+| ||......+....+.. +..++.+..+++++.+||.+||+.||++
T Consensus 197 mAPE~~~~-~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~--~~~~~~p~~~~~~~~~li~~cl~~dP~~ 273 (299)
T 4asz_A 197 MPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ--GRVLQRPRTCPQEVYELMLGCWQREPHM 273 (299)
T ss_dssp CCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH--TCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred cCHHHHcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CCCCCCCccchHHHHHHHHHHcCCChhH
Confidence 99999988 579999999999999999996 8887766665554443 3344445567889999999999999999
Q ss_pred CCCHHHHHh
Q 001059 651 RPSATELLQ 659 (1170)
Q Consensus 651 RPta~eiL~ 659 (1170)
|||+.+|++
T Consensus 274 RPs~~~i~~ 282 (299)
T 4asz_A 274 RKNIKGIHT 282 (299)
T ss_dssp SCCHHHHHH
T ss_pred CcCHHHHHH
Confidence 999999964
No 25
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.9e-48 Score=439.20 Aligned_cols=250 Identities=21% Similarity=0.281 Sum_probs=207.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++++++++||+|+||+||+|++. .+++.||||+++... .....+.|.+|+.+|++++|||||+++++|.+
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--- 100 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTK--- 100 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE---
Confidence 467899999999999999999974 357899999997443 33445789999999999999999999999843
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CCCC
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 491 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 491 (1170)
...+|||||||+ |+|.++|... ..++
T Consensus 101 -------------------------------------~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~ 143 (308)
T 4gt4_A 101 -------------------------------------DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 143 (308)
T ss_dssp -------------------------------------SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCC
T ss_pred -------------------------------------CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCC
Confidence 345699999997 6999999643 3589
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 001059 492 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571 (1170)
Q Consensus 492 e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 571 (1170)
+.++..++.||+.||+|||+++||||||||+||||++++++||+|||+|+.+...... ...+..+||
T Consensus 144 ~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~-------------~~~~~~~gt 210 (308)
T 4gt4_A 144 PPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY-------------KLLGNSLLP 210 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCB-------------CSSSSSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCce-------------eEecccccC
Confidence 9999999999999999999999999999999999999999999999999876432211 112456899
Q ss_pred ccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 572 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
+.|||||++.+ ..|+.++|||||||+||||+| ||......+....+. .+..++.+..+++++.+||.+||+.|
T Consensus 211 ~~ymAPE~l~~-~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~~~~li~~C~~~d 287 (308)
T 4gt4_A 211 IRWMAPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR--NRQVLPCPDDCPAWVYALMIECWNEF 287 (308)
T ss_dssp GGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred CcccCHHHHhC-CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCcccchHHHHHHHHHHcCCC
Confidence 99999999987 579999999999999999986 887766655544433 34444555677889999999999999
Q ss_pred CCCCCCHHHHHhc
Q 001059 648 PSDRPSATELLQD 660 (1170)
Q Consensus 648 P~~RPta~eiL~~ 660 (1170)
|.+|||+.+|+++
T Consensus 288 P~~RPs~~ei~~~ 300 (308)
T 4gt4_A 288 PSRRPRFKDIHSR 300 (308)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhHCcCHHHHHHH
Confidence 9999999999875
No 26
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.3e-47 Score=440.27 Aligned_cols=249 Identities=24% Similarity=0.334 Sum_probs=201.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|.+.++||+|+||+||+|+++ .+++.||||+++. .+....++|.+|+.+|++++|||||+++++|.+
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--- 114 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIVRFFGVCTE--- 114 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC--CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE---
Confidence 368999999999999999999975 3688999999863 344556789999999999999999999999843
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc---------------CCCCH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------------DHFDK 492 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------------~~l~e 492 (1170)
...+|||||||+ |+|.+++... .++++
T Consensus 115 -------------------------------------~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~ 157 (329)
T 4aoj_A 115 -------------------------------------GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157 (329)
T ss_dssp -------------------------------------SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCH
T ss_pred -------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCH
Confidence 356899999997 6999998753 35899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCc
Q 001059 493 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 572 (1170)
Q Consensus 493 ~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 572 (1170)
.+++.++.||+.||+|||+++||||||||+||||+.++++||+|||+|+.+..... ....+..+||+
T Consensus 158 ~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~-------------~~~~~~~~gt~ 224 (329)
T 4aoj_A 158 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY-------------YRVGGRTMLPI 224 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----------------------------CCCCG
T ss_pred HHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCc-------------ceecCcccccc
Confidence 99999999999999999999999999999999999999999999999986532211 11123468999
Q ss_pred cCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCC
Q 001059 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648 (1170)
Q Consensus 573 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP 648 (1170)
.|||||++.+ ..|+.++|||||||+||||+| ||......+....+.. +..++.+..+++++.+||.+||+.||
T Consensus 225 ~ymAPE~~~~-~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~--g~~~~~p~~~~~~~~~li~~cl~~dP 301 (329)
T 4aoj_A 225 RWMPPESILY-RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ--GRELERPRACPPEVYAIMRGCWQREP 301 (329)
T ss_dssp GGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHH--TCCCCCCTTCCHHHHHHHHHHCCSST
T ss_pred cccChhhhcC-CCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CCCCCCcccccHHHHHHHHHHcCcCh
Confidence 9999999998 679999999999999999986 8877666665544433 33344445678899999999999999
Q ss_pred CCCCCHHHHHhc
Q 001059 649 SDRPSATELLQD 660 (1170)
Q Consensus 649 ~~RPta~eiL~~ 660 (1170)
++|||+.+|+++
T Consensus 302 ~~RPs~~ei~~~ 313 (329)
T 4aoj_A 302 QQRHSIKDVHAR 313 (329)
T ss_dssp TTSCCHHHHHHH
T ss_pred hHCcCHHHHHHH
Confidence 999999999875
No 27
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.2e-47 Score=468.42 Aligned_cols=259 Identities=27% Similarity=0.381 Sum_probs=215.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC----CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD----KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~----~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.+++|+++++||+|+||+||+|+++.+|+.||||+++... ..........+++.+++.++|||||+++++|.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~---- 262 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH---- 262 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE----
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE----
Confidence 4689999999999999999999999999999999997532 11111222334466777789999999999883
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
+..++|||||||+ |+|.+++.+.+.+++..++.|+.||+.||+
T Consensus 263 ------------------------------------~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~ 306 (689)
T 3v5w_A 263 ------------------------------------TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306 (689)
T ss_dssp ------------------------------------CSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------ECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 3568999999996 699999999999999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++|||||||||+||||+.+|++||+|||+|+.+... ...+.+|||.|||||++.+...|+
T Consensus 307 yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~-----------------~~~t~~GTp~YmAPEvl~~~~~y~ 369 (689)
T 3v5w_A 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGVAYD 369 (689)
T ss_dssp HHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----------------CCCSCCSCGGGCCHHHHSTTCCCC
T ss_pred HHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC-----------------CCCCccCCcCccCHHHHhCCCCCC
Confidence 999999999999999999999999999999999865321 124569999999999997545699
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATE 656 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~e 656 (1170)
.++|||||||+||||++ ||..... .+....+......+| ...++++++||.+||+.||.+|++ +++
T Consensus 370 ~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p---~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~e 446 (689)
T 3v5w_A 370 SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP---DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446 (689)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC---ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHH
Confidence 99999999999999997 8865432 223333333333333 356789999999999999999998 899
Q ss_pred HHhccCCCCchHHHH
Q 001059 657 LLQDALPPQMEYELL 671 (1170)
Q Consensus 657 iL~~~~~~~~~~~~~ 671 (1170)
|++||||....|+.+
T Consensus 447 i~~HpfF~~idW~~l 461 (689)
T 3v5w_A 447 VKESPFFRSLDWQMV 461 (689)
T ss_dssp HTTSGGGTTCCHHHH
T ss_pred HhcCccccCCCHHHH
Confidence 999999999998765
No 28
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6e-47 Score=438.52 Aligned_cols=252 Identities=24% Similarity=0.331 Sum_probs=207.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC-CCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH-QHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H-pnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||+||+|++..+ ++.||||+++.. ......+.+.+|+.+|++++| ||||+++++|.+.
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~-~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~- 140 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 140 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT-
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc-cChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec-
Confidence 37899999999999999999998754 368999999743 334456789999999999965 9999999998432
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CCC
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHF 490 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l 490 (1170)
...+|||||||+ |+|.++|+.. ..+
T Consensus 141 --------------------------------------~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l 182 (353)
T 4ase_A 141 --------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182 (353)
T ss_dssp --------------------------------------TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCB
T ss_pred --------------------------------------CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccC
Confidence 245799999997 6999999753 348
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 001059 491 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570 (1170)
Q Consensus 491 ~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 570 (1170)
++..+..++.||+.||+|||+++||||||||+|||++.++++||+|||+|+.+.... .....+..+|
T Consensus 183 ~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~-------------~~~~~~~~~g 249 (353)
T 4ase_A 183 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-------------DYVRKGDARL 249 (353)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-------------TSEEETTEEE
T ss_pred CHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCC-------------Cceeeccccc
Confidence 999999999999999999999999999999999999999999999999998653221 0112245689
Q ss_pred CccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCC
Q 001059 571 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 646 (1170)
Q Consensus 571 T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~ 646 (1170)
|+.|||||++.+ ..|+.++|||||||+||||+| ||......+.....+. .+..++.+..+++++.+||.+||+.
T Consensus 250 t~~ymAPE~l~~-~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~-~g~~~~~p~~~~~~~~~li~~c~~~ 327 (353)
T 4ase_A 250 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK-EGTRMRAPDYTTPEMYQTMLDCWHG 327 (353)
T ss_dssp CGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred cccccCHHHHhc-CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHH-cCCCCCCCccCCHHHHHHHHHHcCc
Confidence 999999999988 579999999999999999986 8876544444444444 3334444456788999999999999
Q ss_pred CCCCCCCHHHHHhc
Q 001059 647 SPSDRPSATELLQD 660 (1170)
Q Consensus 647 dP~~RPta~eiL~~ 660 (1170)
||.+|||+.+|++|
T Consensus 328 dP~~RPt~~eil~~ 341 (353)
T 4ase_A 328 EPSQRPTFSELVEH 341 (353)
T ss_dssp SGGGSCCHHHHHHH
T ss_pred ChhHCcCHHHHHHH
Confidence 99999999999987
No 29
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.8e-46 Score=436.73 Aligned_cols=267 Identities=22% Similarity=0.323 Sum_probs=202.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
.+.|++.++||+|+||+||+|+++ .+++.||||++.... ...++.+|+.+|+.+ +|||||+++++|.+
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~---- 91 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK---- 91 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE----
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEE----
Confidence 367999999999999999999986 357899999986432 235688999999998 69999999988743
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
..++|+|||||+ ++|.+++. .+++.+++.++.||+.||+|
T Consensus 92 ------------------------------------~~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~y 132 (361)
T 4f9c_A 92 ------------------------------------NDHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKR 132 (361)
T ss_dssp ------------------------------------TTEEEEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHH
Confidence 467899999997 58999884 59999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCC-------CCCC------CCccccCcccccCccC
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAF-------PTDT------GGVSVDGTGQVGTYFY 574 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~-------~~~~------~~~~~~~~~~~GT~~Y 574 (1170)
||++|||||||||+|||++.+ +.+||+|||+|+............. .... .......++.+||+.|
T Consensus 133 lH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 212 (361)
T 4f9c_A 133 IHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGF 212 (361)
T ss_dssp HHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGG
T ss_pred HHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccc
Confidence 999999999999999999877 7999999999986543211100000 0000 0001123456899999
Q ss_pred CCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHH-HHHHhhh-----------------------------
Q 001059 575 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQI-VLSDLKQ----------------------------- 621 (1170)
Q Consensus 575 ~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~-~~~~l~~----------------------------- 621 (1170)
||||++.+.+.|+.++||||+||++|||++ ||....+... ...+...
T Consensus 213 ~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~ 292 (361)
T 4f9c_A 213 RAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLR 292 (361)
T ss_dssp CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHH
T ss_pred cCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhh
Confidence 999999886679999999999999999997 8865433221 1111100
Q ss_pred ----------------------cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 622 ----------------------KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 622 ----------------------~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.......+...++++.+||++||..||++|||++|+|+||||+.+.
T Consensus 293 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~ 360 (361)
T 4f9c_A 293 KLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS 360 (361)
T ss_dssp HHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred HHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence 0001123456778999999999999999999999999999998753
No 30
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.1e-45 Score=455.09 Aligned_cols=258 Identities=23% Similarity=0.419 Sum_probs=222.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...+++|++++.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|+.+|+.++|||||+++++|.
T Consensus 153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~------ 224 (573)
T 3uto_A 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFE------ 224 (573)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEE------
T ss_pred CcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEE------
Confidence 345789999999999999999999999999999999997543 334567899999999999999999999983
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...+|||||||+ |+|.+++.. .+.+++.+++.++.||+.||+|
T Consensus 225 ----------------------------------~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~y 270 (573)
T 3uto_A 225 ----------------------------------DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 270 (573)
T ss_dssp ----------------------------------CSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------ECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 2467899999996 599998864 4679999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC--CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
||++||+||||||+|||++.+ +.+||+|||+|+.+.... .....+||+.|||||++.+ ..|
T Consensus 271 lH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~----------------~~~~~~GT~~y~APEv~~~-~~y 333 (573)
T 3uto_A 271 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----------------SVKVTTGTAEFAAPEVAEG-KPV 333 (573)
T ss_dssp HHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS----------------EEEEECSSGGGCCHHHHTT-CCB
T ss_pred HHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC----------------ceeeeEECccccCHHHhCC-CCC
Confidence 999999999999999999864 899999999998764221 1245689999999999998 569
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
+.++|||||||+||||++ ||......+....+......++ +.+...++++++||++||+.||.+|||+.|+|+|||
T Consensus 334 ~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw 413 (573)
T 3uto_A 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW 413 (573)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcC
Confidence 999999999999999996 8988777777666665555554 355678899999999999999999999999999999
Q ss_pred CCCch
Q 001059 663 PPQME 667 (1170)
Q Consensus 663 ~~~~~ 667 (1170)
|....
T Consensus 414 ~~~~~ 418 (573)
T 3uto_A 414 LTPGN 418 (573)
T ss_dssp TSCCC
T ss_pred cCCCC
Confidence 98653
No 31
>1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C*
Probab=100.00 E-value=2.5e-45 Score=410.04 Aligned_cols=263 Identities=17% Similarity=0.201 Sum_probs=216.6
Q ss_pred hhHHhHHH--HHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHh-CCC-CceeEEEec
Q 001059 730 DYVVQVTK--EMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAIS-NQK-SSFKRYEIS 805 (1170)
Q Consensus 730 ~~I~~~i~--~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~-~~~-~P~r~~Y~g 805 (1170)
.++++.++ ++|++|||++|.||+|........ + +|.|++|+.++||||+|+|+| .-.. +.. .|+|+||+|
T Consensus 4 ~~le~~~r~~~~~~~~Gy~eI~tP~le~~~l~~~--d---~f~d~~g~~l~LRpd~T~~~a-~~~~~~~~~~p~R~~y~g 77 (275)
T 1usy_A 4 LDFEKVFSFYSKATKKGFSPFFVPALEKAEEPAG--N---FFLDRKGNLFSIREDFTKTVL-NHRKRYSPDSQIKVWYAD 77 (275)
T ss_dssp CCHHHHHHHHHHHHHTTCEECCCCSEEECSSCCS--S---CEEETTSCEEEECCCHHHHHH-HHHTTCTTCCCEEEECCE
T ss_pred HhHHHHHHHHHHHHHCCCEEecCccccchhhhcc--c---ccCCCCCCEEEeCCcChHHHH-HHHhhcCCCCceEEEEec
Confidence 35677777 999999999999999944433221 2 568999999999999999999 2211 225 799999999
Q ss_pred CeEEcCCCCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHH
Q 001059 806 SVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAE 885 (1170)
Q Consensus 806 ~VfR~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~ 885 (1170)
+|||+|+|+. |||+|+|+|+||.+++.+|+|+|.++.++|+.+|+.+ ++|+|||+++++.+++. +++++++.+++
T Consensus 78 ~vfR~e~~~~--Ref~Q~g~ei~g~~~~~~DaEvi~l~~~~l~~lgl~~-~~i~l~~~~~~~~~~~~--~~~~~~~~l~~ 152 (275)
T 1usy_A 78 FVYRYSGSDL--VAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGP-VIVEIGHTGVYEDLLKE--IPKDLHEKVLN 152 (275)
T ss_dssp EEEEEETTEE--EEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHHCCSC-EEEEEEETTHHHHHHTT--SCGGGHHHHHH
T ss_pred eEEecCCCCC--CeeeEeCEEEecCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCCHHHHHHHHHh--CCHHHHHHHHH
Confidence 9999999988 8899999999999999999999999999999999975 99999999999999875 77778888989
Q ss_pred HHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHH--HHH
Q 001059 886 LLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL--YLR 963 (1170)
Q Consensus 886 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L--~l~ 963 (1170)
+++++++ . ++ ++.+..++++++.++.+..++ .+.|.+ ++++. +..++...+.++.+ +++
T Consensus 153 ~l~~~~~---------~---~~-~~~l~~~~l~~~~~~~l~~l~-~~~g~~-~~l~~----l~~~~~~l~~l~~l~~~l~ 213 (275)
T 1usy_A 153 LIDTKNL---------A---EI-EFLSHMKKIDLSRVEKIIEDS-IYRRSP-EHLKT----MDLPLSVREDLLSASSFLQ 213 (275)
T ss_dssp HHHTTCH---------H---HH-HHHHHHTCCCCTHHHHHHHHH-HHCCSG-GGGGT----SCCCHHHHHHHHHHHHHHH
T ss_pred HHHccCH---------H---HH-HHHHHhcCCCHHHHHHHHHHH-HhhCCH-HHHHH----HhcCHHHHHHHHHHHHHHH
Confidence 9988773 1 22 445666889888899999998 566653 44443 34455667777777 888
Q ss_pred -HccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcccccccccCCCCCCCCceEEe
Q 001059 964 -IWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGAS 1042 (1170)
Q Consensus 964 -~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfa 1042 (1170)
.+| ..++.||++++||++||||+|||+|..+.+ ++||+|||||+| ++||||||
T Consensus 214 ~~~g-~~~~~~D~~lvRgldYYtG~vFe~~~~~~~--------~~i~~GGRYD~l-----------------~~pavGfs 267 (275)
T 1usy_A 214 EKFP-TVSVEIDLTLARTIEEYCGLIFTIYDTSSS--------RLVAAGGEYTVN-----------------GEKGVGGS 267 (275)
T ss_dssp HHCS-SSEEEECCCCGGGGGTCSSEEEEEEETTTT--------EEEEEEEEEEET-----------------TEEEEEEE
T ss_pred HhcC-CCeEEEeccccCCCCccCCeEEEEEECCCC--------CeEeeecCCCCC-----------------CCCEEEEE
Confidence 888 568999999999999999999999986433 489999999997 35999999
Q ss_pred ccHHHH
Q 001059 1043 LALETI 1048 (1170)
Q Consensus 1043 iglerL 1048 (1170)
+|+||+
T Consensus 268 ig~er~ 273 (275)
T 1usy_A 268 IFLEGK 273 (275)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 999986
No 32
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-44 Score=411.56 Aligned_cols=253 Identities=22% Similarity=0.278 Sum_probs=188.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|.+.++||+|+||+||+|++ +|+.||||+++... .....+..|+..+.+++|||||+++++|.+.+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~------- 70 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDN------- 70 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-------
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-------
Confidence 5788999999999999999988 49999999986432 11222334666667889999999999986531
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ- 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~- 512 (1170)
.....+|||||||+ |+|.++++. .+++++.+.+++.|++.||+|||++
T Consensus 71 -----------------------------~~~~~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~ 120 (303)
T 3hmm_A 71 -----------------------------GTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEI 120 (303)
T ss_dssp -----------------------------SSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCB
T ss_pred -----------------------------CCceEEEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 11346899999997 699999975 4699999999999999999999987
Q ss_pred -------CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-
Q 001059 513 -------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP- 584 (1170)
Q Consensus 513 -------gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~- 584 (1170)
+||||||||+||||+.++++||+|||+|+........ ......+.+||+.|||||++.+..
T Consensus 121 ~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~-----------~~~~~~~~~GT~~ymAPE~l~~~~~ 189 (303)
T 3hmm_A 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT-----------IDIAPNHRVGTKRYMAPEVLDDSIN 189 (303)
T ss_dssp CSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------ESCC-----CCGGGCCHHHHTTCSC
T ss_pred hhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCc-----------eeeecccccccccccCHHHhccccc
Confidence 8999999999999999999999999999875422110 011224568999999999997632
Q ss_pred ----CCCccchhHHHHHHHHHhhc---CCC----------ch----hHHHHHHHHhhhcCC---CCCcccc--CCHHHHH
Q 001059 585 ----KIDEKADMYSLGIVFFELWH---PFS----------TA----MERQIVLSDLKQKGE---LPPSWVA--KFSEQES 638 (1170)
Q Consensus 585 ----~~~~ksDIwSlGviL~ELlt---Pf~----------~~----~~~~~~~~~l~~~~~---~p~~~~~--~~~e~~~ 638 (1170)
.|+.++|||||||+||||+| ||. .. ...+.....+..... +|..+.. .++.+.+
T Consensus 190 ~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~ 269 (303)
T 3hmm_A 190 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAK 269 (303)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHH
T ss_pred ccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHH
Confidence 36789999999999999996 221 11 011222222222222 2222221 2246789
Q ss_pred HHHHccCCCCCCCCCHHHHHhc
Q 001059 639 LLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 639 LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||.+||+.||++|||+.+|++.
T Consensus 270 li~~cl~~dP~~RPt~~ei~~~ 291 (303)
T 3hmm_A 270 IMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp HHHTTCCSSGGGSCCHHHHHHH
T ss_pred HHHHHcccCHhHCcCHHHHHHH
Confidence 9999999999999999999874
No 33
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.3e-43 Score=405.89 Aligned_cols=255 Identities=27% Similarity=0.441 Sum_probs=221.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+++|++++.||+|+||+||+|++..+|+.||||++..........+.+.+|+.+|+.++||||+++++++..
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~------- 85 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET------- 85 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-------
Confidence 4689999999999999999999999999999999998766666667789999999999999999999998732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||+
T Consensus 86 ---------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~ 132 (328)
T 3fe3_A 86 ---------------------------------EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132 (328)
T ss_dssp ---------------------------------SSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999888899999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++...... .....+||+.|+|||++.+....+.++|
T Consensus 133 ~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~~D 196 (328)
T 3fe3_A 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG----------------KLDAFCGAPPYAAPELFQGKKYDGPEVD 196 (328)
T ss_dssp TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC----------------GGGTTSSSGGGCCHHHHHTCCCCSHHHH
T ss_pred CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC----------------ccccccCCcceeCcccccCCCcCCchhh
Confidence 999999999999999999999999999998653211 1244689999999999998544568999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||||++|+|++ ||......+...........+|. ..++++.+||++||+.||.+|||++++++|||+...
T Consensus 197 iwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 271 (328)
T 3fe3_A 197 VWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF---YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAG 271 (328)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred hhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence 9999999999997 88877666666555554444443 356799999999999999999999999999999764
No 34
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=8.9e-43 Score=392.83 Aligned_cols=259 Identities=27% Similarity=0.454 Sum_probs=212.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++++.||+|+||+||+|+++.+|+.||||+++...........+.+|+.++++++||||++++++|.+
T Consensus 1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 72 (292)
T 3o0g_A 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-------- 72 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--------
T ss_pred CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe--------
Confidence 468999999999999999999999999999999998766655566789999999999999999999998743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||++++.+.+.. .+.+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~ 120 (292)
T 3o0g_A 73 --------------------------------DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120 (292)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999999988877765 56799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++||
T Consensus 121 ~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 185 (292)
T 3o0g_A 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185 (292)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC---------------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHH
T ss_pred CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc---------------ccccCCccccCCcChHHHcCCCCcCchHHH
Confidence 99999999999999999999999999998653211 112445799999999999875568999999
Q ss_pred HHHHHHHHHhhc---CCC-chhHHHHHHHHhhhcCCCC--------------------------CccccCCHHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFS-TAMERQIVLSDLKQKGELP--------------------------PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~-~~~~~~~~~~~l~~~~~~p--------------------------~~~~~~~~e~~~LI~~ 642 (1170)
|||||++|+|++ ||. ..........+....+..+ ......++++.+||++
T Consensus 186 wslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (292)
T 3o0g_A 186 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQN 265 (292)
T ss_dssp HHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHH
Confidence 999999999996 543 3333333333222111110 1112456789999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||++++|+||||....
T Consensus 266 ~L~~dP~~R~t~~e~l~hp~f~~~~ 290 (292)
T 3o0g_A 266 LLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp HSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred HhccChhhCCCHHHHhcCcccccCC
Confidence 9999999999999999999998764
No 35
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=7.6e-43 Score=398.90 Aligned_cols=310 Identities=35% Similarity=0.676 Sum_probs=222.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
++++++|++++.||+|+||+||+|+++.+|+.||||+++... .....+.+.+|+.+|++++||||++++++|.+.....
T Consensus 2 s~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 2 SRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp CHHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCH
T ss_pred chhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccch
Confidence 678899999999999999999999999999999999998654 3345578999999999999999999999997653100
Q ss_pred cC--CCCCCCCC-----ccc------ccccc----cccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCC---
Q 001059 431 FD--GDSMWGSG-----TLA------SSTFS----NRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH--- 489 (1170)
Q Consensus 431 ~~--~~~~~~~g-----~~~------~~~~~----~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~--- 489 (1170)
+. .+..|... .+. ..... ........+..........++|++||||++ +|.+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 00 00000000 000 00000 000000000001111234579999999974 99999986543
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 001059 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 569 (1170)
Q Consensus 490 l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1170)
.++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............. ...........+
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~---~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT---PMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC-----------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccc---cccccccccccC
Confidence 56677999999999999999999999999999999999999999999999987643321110000 000011234568
Q ss_pred cCccCCCcccccCCCCCCccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 570 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
||+.|+|||++.+ ..++.++|||||||++|||++|+.+............ ....|..+...++++.+||.+||+.||.
T Consensus 238 gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 315 (332)
T 3qd2_B 238 GTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVR-NLKFPLLFTQKYPQEHMMVQDMLSPSPT 315 (332)
T ss_dssp -CGGGSCHHHHHC-CCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHH-TTCCCHHHHHHCHHHHHHHHHHHCSSGG
T ss_pred CCcCccChHHhcC-CCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhh-ccCCCcccccCChhHHHHHHHHccCCCC
Confidence 9999999999988 5789999999999999999999887665554444433 4556666667778999999999999999
Q ss_pred CCCCHHHHHhccCCCCc
Q 001059 650 DRPSATELLQDALPPQM 666 (1170)
Q Consensus 650 ~RPta~eiL~~~~~~~~ 666 (1170)
+|||+.++++||||.++
T Consensus 316 ~Rps~~~~l~~~~f~~~ 332 (332)
T 3qd2_B 316 ERPEATDIIENAIFENL 332 (332)
T ss_dssp GSCCHHHHHHSTTCCCC
T ss_pred cCCCHHHHhhchhhhcC
Confidence 99999999999999864
No 36
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.3e-42 Score=402.75 Aligned_cols=262 Identities=23% Similarity=0.364 Sum_probs=223.1
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----hhHHHHHHHHHHHHhccCCCceeEEEEEeec
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFET 426 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~ 426 (1170)
....++|++.+.||+|+||+||+|+++.+|+.||||+++...... ...+.+.+|+.+|+.++||||++++++|.+
T Consensus 8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~- 86 (361)
T 2yab_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN- 86 (361)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-
T ss_pred CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe-
Confidence 345578999999999999999999999999999999998654321 134678999999999999999999998732
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 87 ---------------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~a 127 (361)
T 2yab_A 87 ---------------------------------------RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127 (361)
T ss_dssp ---------------------------------------SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 457899999995 6999999888889999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCC----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
|+|||++||+||||||+|||++.++ .+||+|||+++...... .....+||+.|+|||++.
T Consensus 128 L~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 191 (361)
T 2yab_A 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----------------EFKNIFGTPEFVAPEIVN 191 (361)
T ss_dssp HHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC----------------CCCCCCSCGGGCCHHHHT
T ss_pred HHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC----------------ccccCCCCccEECchHHc
Confidence 9999999999999999999998876 79999999998653211 123467999999999998
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
+ ..|+.++|||||||++|+|++ ||......+....+......+++ .+...++++++||++||..||.+|||+.++
T Consensus 192 ~-~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~ 270 (361)
T 2yab_A 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEA 270 (361)
T ss_dssp T-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred C-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 7 568999999999999999996 88777666666655554444443 456778899999999999999999999999
Q ss_pred HhccCCCCchHH
Q 001059 658 LQDALPPQMEYE 669 (1170)
Q Consensus 658 L~~~~~~~~~~~ 669 (1170)
++|||+....+.
T Consensus 271 l~hp~~~~~~~~ 282 (361)
T 2yab_A 271 LRHPWITPVDTQ 282 (361)
T ss_dssp HTSTTTSCSSHH
T ss_pred hcCcCcCCCchh
Confidence 999999977543
No 37
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.9e-42 Score=399.79 Aligned_cols=259 Identities=27% Similarity=0.391 Sum_probs=220.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------- 76 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT------- 76 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-------
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-------
Confidence 5799999999999999999999999999999999975321 11234578899999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||+
T Consensus 77 ---------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~ 123 (337)
T 1o6l_A 77 ---------------------------------HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123 (337)
T ss_dssp ---------------------------------SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999997 5999999988899999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..++.++|
T Consensus 124 ~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 187 (337)
T 1o6l_A 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVD 187 (337)
T ss_dssp TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT---------------CCBCCCEECGGGCCGGGGSS-SCBCTTHH
T ss_pred CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC---------------CcccccccChhhCChhhhcC-CCCCchhh
Confidence 999999999999999999999999999997532110 11245689999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~ 663 (1170)
||||||++|||++ ||...........+......+|. ..++++.+||++||+.||.+|| ++.++++|+||
T Consensus 188 iwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f 264 (337)
T 1o6l_A 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264 (337)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred cccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCc
Confidence 9999999999996 88776666555555554444443 4578999999999999999999 99999999999
Q ss_pred CCchHHHH
Q 001059 664 PQMEYELL 671 (1170)
Q Consensus 664 ~~~~~~~~ 671 (1170)
....+..+
T Consensus 265 ~~~~~~~~ 272 (337)
T 1o6l_A 265 LSINWQDV 272 (337)
T ss_dssp TTCCHHHH
T ss_pred CCCCHHHH
Confidence 99887644
No 38
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.1e-42 Score=394.35 Aligned_cols=261 Identities=25% Similarity=0.445 Sum_probs=209.9
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
....++|++++.||+|+||+||+|++. +|+.||+|+++...........+.+|+.+|+.++||||++++++|.+
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 90 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS----- 90 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-----
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-----
Confidence 345689999999999999999999996 69999999997655544456788999999999999999999998732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+++|.+.+.... .+++..++.++.||+.||+||
T Consensus 91 -----------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L 135 (311)
T 3niz_A 91 -----------------------------------ERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135 (311)
T ss_dssp -----------------------------------SSCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 35689999999999998887654 599999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++...... ...+..+||+.|+|||++.+...++.+
T Consensus 136 H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~ 200 (311)
T 3niz_A 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV---------------RSYTHEVVTLWYRAPDVLMGSKKYSTS 200 (311)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC---------------C---CCCCCCTTCCHHHHTTCCSCCTH
T ss_pred HHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc---------------ccccCCcccCCcCCHHHhcCCCCCCch
Confidence 99999999999999999999999999999998653211 112345789999999999875678999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CC--------------------------ccccCCHHHHHH
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PP--------------------------SWVAKFSEQESL 639 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~--------------------------~~~~~~~e~~~L 639 (1170)
+|||||||++|+|++ ||...........+....+.. +. .....++++.+|
T Consensus 201 ~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 280 (311)
T 3niz_A 201 VDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDL 280 (311)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHH
T ss_pred HHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHH
Confidence 999999999999997 776554433333322211111 11 112356788999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|++||+.||.+|||+.++|+||||....
T Consensus 281 i~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 281 LSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp HHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred HHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 9999999999999999999999998765
No 39
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=402.12 Aligned_cols=257 Identities=30% Similarity=0.470 Sum_probs=210.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...++|++.+.||+|+||+||+|++..+|+.||||++...... .....+.+|+.+|+.++||||+++++++..
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~------ 79 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLET------ 79 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEe------
Confidence 3468999999999999999999999999999999999765432 234578899999999999999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||
T Consensus 80 ----------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH 125 (347)
T 3zgw_A 80 ----------------------------------ANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH 125 (347)
T ss_dssp ----------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 457899999995 699999988889999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+|....... .......+||+.|+|||++.+...++.++
T Consensus 126 ~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 191 (347)
T 3zgw_A 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK--------------DYHLQTCCGSLAYAAPELIQGKSYLGSEA 191 (347)
T ss_dssp HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC----------------------------CGGGCCHHHHTTC---CCHH
T ss_pred HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC--------------CccccccCCccCccCHHHHcCCCCCCcHh
Confidence 9999999999999999999999999999987543211 11124468999999999999855468999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||||||++|+|++ ||......+....+.......|. ..++++.+||.+||+.||.+|||+.++++|||+.+.
T Consensus 192 DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~ 267 (347)
T 3zgw_A 192 DVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK---WLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD 267 (347)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcC
Confidence 99999999999997 88877666666665554444443 356799999999999999999999999999998653
No 40
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1e-42 Score=404.58 Aligned_cols=261 Identities=25% Similarity=0.400 Sum_probs=217.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
..+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|+.+ +||||++++++|..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~---- 95 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT---- 95 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe----
Confidence 346899999999999999999999999999999999975321 122345688999999988 79999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ |+|.+++.....+++..++.++.||+.||+|
T Consensus 96 ------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~ 139 (353)
T 3txo_A 96 ------------------------------------PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139 (353)
T ss_dssp ------------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999997 5999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.
T Consensus 140 LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~ 203 (353)
T 3txo_A 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG---------------VTTATFCGTPDYIAPEILQE-MLYGP 203 (353)
T ss_dssp HHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC------------------------CCGGGCCHHHHHH-HHCTT
T ss_pred HHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCC---------------ccccccCCCcCeEChhhcCC-CCcCC
Confidence 999999999999999999999999999999997532111 12245689999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH------HHHHh
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA------TELLQ 659 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta------~eiL~ 659 (1170)
++|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||++ .++++
T Consensus 204 ~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 204 AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT---WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 9999999999999996 88877777766666665555543 356799999999999999999999 99999
Q ss_pred ccCCCCchHHHH
Q 001059 660 DALPPQMEYELL 671 (1170)
Q Consensus 660 ~~~~~~~~~~~~ 671 (1170)
||||....|..+
T Consensus 281 hp~f~~~~w~~l 292 (353)
T 3txo_A 281 HPFFKEIDWAQL 292 (353)
T ss_dssp SGGGTTCCHHHH
T ss_pred CCcccCCCHHHH
Confidence 999999987654
No 41
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.9e-42 Score=411.43 Aligned_cols=260 Identities=25% Similarity=0.435 Sum_probs=222.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..++.++|++.+.||+|+||+||+|.++.+|+.||+|++..........+.+.+|+.+|+.++||||++++++|.+
T Consensus 6 ~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---- 81 (444)
T 3soa_A 6 CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE---- 81 (444)
T ss_dssp -CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC----
T ss_pred cccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE----
Confidence 4567789999999999999999999999999999999998766555566789999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ |+|.+.+.....+++..++.++.||+.||+|
T Consensus 82 ------------------------------------~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~ 125 (444)
T 3soa_A 82 ------------------------------------EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 125 (444)
T ss_dssp ------------------------------------SSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceeec---CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFD---ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~---~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
||++||+||||||+|||++ .++.+||+|||+|+...... ......+||+.|+|||++.+ ..
T Consensus 126 lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~Y~APE~l~~-~~ 189 (444)
T 3soa_A 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ---------------QAWFGFAGTPGYLSPEVLRK-DP 189 (444)
T ss_dssp HHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC---------------CBCCCSCSCGGGCCHHHHTT-CC
T ss_pred HHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC---------------ceeecccCCcccCCHHHhcC-CC
Confidence 9999999999999999998 45789999999997653211 11234689999999999987 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
|+.++|||||||++|+|++ ||......+....+.......+ +.+...++++.+||.+||+.||.+|||+.++|+||
T Consensus 190 ~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp BCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred CCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 8999999999999999997 8877776666665555444443 45667889999999999999999999999999999
Q ss_pred CCCC
Q 001059 662 LPPQ 665 (1170)
Q Consensus 662 ~~~~ 665 (1170)
|+..
T Consensus 270 ~~~~ 273 (444)
T 3soa_A 270 WISH 273 (444)
T ss_dssp TTHH
T ss_pred cccC
Confidence 9864
No 42
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.3e-42 Score=387.67 Aligned_cols=257 Identities=25% Similarity=0.445 Sum_probs=208.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++++.||+|+||+||+|++ .+|+.||||++............+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 71 (288)
T 1ob3_A 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------- 71 (288)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC--------
T ss_pred CccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc--------
Confidence 36899999999999999999999 589999999997654433345678899999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||++++|.+++... +.+++..++.++.||+.||+|||++
T Consensus 72 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (288)
T 1ob3_A 72 --------------------------------KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119 (288)
T ss_dssp --------------------------------SSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3468999999999999998764 6799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ...+...||+.|+|||++.+...++.++||
T Consensus 120 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 184 (288)
T 1ob3_A 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---------------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDI 184 (288)
T ss_dssp TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------------------------CCCTTCCHHHHTTCCSCCTHHHH
T ss_pred CeecCCCCHHHEEEcCCCCEEEeECccccccCccc---------------cccccccccccccCchheeCCCCCCcHHHH
Confidence 99999999999999999999999999998653211 012345789999999999875668999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC--------------------------CccccCCHHHHHHHHHc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP--------------------------PSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p--------------------------~~~~~~~~e~~~LI~~~ 643 (1170)
|||||++|||++ ||......+....+....+..+ ......++++.+||++|
T Consensus 185 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 264 (288)
T 1ob3_A 185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM 264 (288)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHH
Confidence 999999999997 7876655554444332211100 01124567899999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCc
Q 001059 644 MSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|+.||.+|||+.++++||||.+.
T Consensus 265 L~~dP~~Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 265 LKLDPNQRITAKQALEHAYFKEN 287 (288)
T ss_dssp TCSSTTTSCCHHHHHTSGGGGC-
T ss_pred cCCCcccCCCHHHHhcCcchhhc
Confidence 99999999999999999999753
No 43
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-42 Score=394.76 Aligned_cols=257 Identities=27% Similarity=0.441 Sum_probs=220.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+++|++++.||+|+||+||+|+++.+|+.||+|+++.... .....+.+.+|..+|+.++||||++++++|.+
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~------ 77 (318)
T 1fot_A 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD------ 77 (318)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC------
T ss_pred ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe------
Confidence 35799999999999999999999999999999999975321 11234568899999999999999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 78 ----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH 123 (318)
T 1fot_A 78 ----------------------------------AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 123 (318)
T ss_dssp ----------------------------------SSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 457899999997 599999998889999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++++||+|||+++.... .....+||+.|+|||++.+ ..++.++
T Consensus 124 ~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~ 184 (318)
T 1fot_A 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD------------------VTYTLCGTPDYIAPEVVST-KPYNKSI 184 (318)
T ss_dssp TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS------------------CBCCCCSCTTTCCHHHHTT-CCBCTTH
T ss_pred HCCccccCCChheEEEcCCCCEEEeecCcceecCC------------------ccccccCCccccCHhHhcC-CCCCccc
Confidence 99999999999999999999999999999985421 1134589999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~ 662 (1170)
|||||||++|||++ ||...........+......+|+ ..++++.+||++||+.||.+|| +++++++|||
T Consensus 185 DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~ 261 (318)
T 1fot_A 185 DWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP---FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261 (318)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred chhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCcc
Confidence 99999999999996 88777666666666555444443 4567999999999999999999 9999999999
Q ss_pred CCCchHHHH
Q 001059 663 PPQMEYELL 671 (1170)
Q Consensus 663 ~~~~~~~~~ 671 (1170)
|....++.+
T Consensus 262 f~~~~~~~~ 270 (318)
T 1fot_A 262 FKEVVWEKL 270 (318)
T ss_dssp GSSCCHHHH
T ss_pred ccCCCHHHH
Confidence 999887644
No 44
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=5.3e-42 Score=388.45 Aligned_cols=255 Identities=22% Similarity=0.374 Sum_probs=215.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|++..+|+.||||++...... ..+.+.+|+.+++.++||||++++++|..
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------- 88 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV------- 88 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc--HHHHHHHHHHHHhcCCCCCCCeEeEEEEE-------
Confidence 357899999999999999999999999999999999765433 34678899999999999999999998843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++... .+++..++.++.||+.||+|||+
T Consensus 89 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~ 134 (297)
T 3fxz_A 89 ---------------------------------GDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHS 134 (297)
T ss_dssp ---------------------------------TTEEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999995 6999988764 69999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|
T Consensus 135 ~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 198 (297)
T 3fxz_A 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVD 198 (297)
T ss_dssp TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCGGGCCHHHHHC-SCBCTHHH
T ss_pred CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc---------------cccCCccCCcCccChhhhcC-CCCCcHHH
Confidence 999999999999999999999999999997653221 11234589999999999988 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||||++|||++ ||..........................++.+.+||.+||+.||.+|||+.++++|+|+...
T Consensus 199 iwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 276 (297)
T 3fxz_A 199 IWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA 276 (297)
T ss_dssp HHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence 9999999999997 88766655554444443333334455677899999999999999999999999999998764
No 45
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=5e-42 Score=412.36 Aligned_cols=280 Identities=28% Similarity=0.417 Sum_probs=203.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++++.||+|+||+||+|+++.+|+.||||++...........++.+|+.+|+.++|||||+++++|....
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 125 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKD----- 125 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC-----
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCC-----
Confidence 357899999999999999999999999999999999765555556678999999999999999999999874321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
......+|+||||++++|.+++.....+++..++.++.||+.||+|||++
T Consensus 126 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 175 (458)
T 3rp9_A 126 ------------------------------VEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA 175 (458)
T ss_dssp ------------------------------TTTCCCEEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cccCceEEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 01235689999999999999999888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCC-------------CCCCccccCcccccCccCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT-------------DTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
||+||||||+|||++.++++||+|||+|+........... .+. .........+..+||++|+|||+
T Consensus 176 ~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 254 (458)
T 3rp9_A 176 GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQ-LPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPEL 254 (458)
T ss_dssp TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCC-CC---------------------------CCCTTCCHHH
T ss_pred CcCCCCCChhhEEECCCCCEeecccccchhccCccccccc-cccCccccccccccccccccccccccCCcccccccChHH
Confidence 9999999999999999999999999999876432211000 000 00000113456789999999998
Q ss_pred ccCCCCCCccchhHHHHHHHHHhhc--------------CCCchh--------------------HHHHHHHHhhhcCC-
Q 001059 580 EQGWPKIDEKADMYSLGIVFFELWH--------------PFSTAM--------------------ERQIVLSDLKQKGE- 624 (1170)
Q Consensus 580 l~~~~~~~~ksDIwSlGviL~ELlt--------------Pf~~~~--------------------~~~~~~~~l~~~~~- 624 (1170)
+.....|+.++||||||||||||++ +|.+.. .......+....+.
T Consensus 255 ~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p 334 (458)
T 3rp9_A 255 ILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTP 334 (458)
T ss_dssp HTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCC
T ss_pred hhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCC
Confidence 7654679999999999999999985 221111 01111111110000
Q ss_pred ---------------------------CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 625 ---------------------------LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 625 ---------------------------~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
+...+...++++.+||++||..||.+|||++++|+||||....+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~ 405 (458)
T 3rp9_A 335 SEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI 405 (458)
T ss_dssp CHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred CHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence 11123455789999999999999999999999999999998753
No 46
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.5e-42 Score=404.68 Aligned_cols=276 Identities=24% Similarity=0.335 Sum_probs=208.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++++.||+|+||+||+|.++.+|+.||||++............+.+|+.+|+.+. ||||++++++|...
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~---- 81 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD---- 81 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT----
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC----
Confidence 4568999999999999999999999999999999999765555666778899999999997 99999999988432
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+...+|+|||||+++|..++.. ..+++..+..++.||+.||+|||
T Consensus 82 ----------------------------------~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH 126 (388)
T 3oz6_A 82 ----------------------------------NDRDVYLVFDYMETDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLH 126 (388)
T ss_dssp ----------------------------------TSSCEEEEEECCSEEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCEEEEEecccCcCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 2346899999999999998876 57999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCC-CC-----CCCCCccccCcccccCccCCCcccccCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA-FP-----TDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
++||+||||||+|||++.++.+||+|||+|+.+.......... .. ..........+..+||+.|+|||++.+..
T Consensus 127 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 206 (388)
T 3oz6_A 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGST 206 (388)
T ss_dssp HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCC
T ss_pred hCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCC
Confidence 9999999999999999999999999999998653211100000 00 00000112235568999999999998766
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC----------------------------------
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP---------------------------------- 627 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~---------------------------------- 627 (1170)
.|+.++|||||||++|||++ ||...........++...+..+.
T Consensus 207 ~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (388)
T 3oz6_A 207 KYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFT 286 (388)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHH
T ss_pred CCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCc
Confidence 79999999999999999997 78766555444433321111110
Q ss_pred ----------ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 628 ----------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 628 ----------~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.....++++.+||++||+.||.+|||++++|+|||+...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 287 KWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIF 335 (388)
T ss_dssp HHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred chhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence 011557789999999999999999999999999998765
No 47
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.3e-42 Score=397.03 Aligned_cols=265 Identities=24% Similarity=0.421 Sum_probs=208.6
Q ss_pred CCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 349 ~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
+....+++|++++.||+|+||+||+|++..+|+.||||+++...........+.+|+.+|+.++||||+++++++.+
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 104 (329)
T 3gbz_A 28 PSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH--- 104 (329)
T ss_dssp ----CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE---
T ss_pred CcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec---
Confidence 34566789999999999999999999999999999999997665544455678899999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+++|.+++.....+++..++.++.||+.||+|
T Consensus 105 -------------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~ 147 (329)
T 3gbz_A 105 -------------------------------------NHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNF 147 (329)
T ss_dssp -------------------------------------TTEEEEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceeec-----CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 509 IHGQGIIHRDLTPNNIFFD-----ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~-----~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
||++||+||||||+|||++ .++.+||+|||+++...... ......+||+.|+|||++.+.
T Consensus 148 LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~ 212 (329)
T 3gbz_A 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI---------------RQFTHEIITLWYRPPEILLGS 212 (329)
T ss_dssp HHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--------------------------CCTTCCHHHHTTC
T ss_pred HHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcc---------------cccCCCcCCccccCHHHhcCC
Confidence 9999999999999999994 44569999999998763221 112345789999999999875
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-cc--------------------------ccCC
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SW--------------------------VAKF 633 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~--------------------------~~~~ 633 (1170)
..++.++|||||||++|||++ ||...........+....+..+. .+ ...+
T Consensus 213 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (329)
T 3gbz_A 213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLD 292 (329)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSC
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccC
Confidence 668999999999999999996 78766665554444332221111 00 1156
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
+++.+||.+||+.||.+|||+.++|+||||.+..+
T Consensus 293 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 327 (329)
T 3gbz_A 293 DEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF 327 (329)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCC
Confidence 78899999999999999999999999999988654
No 48
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.1e-42 Score=399.38 Aligned_cols=259 Identities=25% Similarity=0.438 Sum_probs=222.0
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
...+.++|++.+.||+|+||.||+|.++.+|+.||+|+++.........+.+.+|+.+++.++||||++++++|.+
T Consensus 24 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~---- 99 (362)
T 2bdw_A 24 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE---- 99 (362)
T ss_dssp CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred CCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe----
Confidence 3455678999999999999999999999999999999998766666666789999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+|
T Consensus 100 ------------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~ 143 (362)
T 2bdw_A 100 ------------------------------------ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 143 (362)
T ss_dssp ------------------------------------SSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999997 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
||++||+||||||+|||++.+ +.+||+|||+++...... .....+||+.|+|||++.+ ..
T Consensus 144 lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~ 206 (362)
T 2bdw_A 144 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----------------AWHGFAGTPGYLSPEVLKK-DP 206 (362)
T ss_dssp HHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC----------------SCCCSCSCTTTCCHHHHTT-CC
T ss_pred HHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc----------------ccccCCCCccccCHHHHcc-CC
Confidence 999999999999999999865 459999999997653211 1234689999999999987 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
|+.++|||||||++|+|++ ||...........+.......+ +.+...++++.+||.+||+.||.+|||+.++|+||
T Consensus 207 ~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 286 (362)
T 2bdw_A 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 286 (362)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSH
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 8999999999999999997 8877666655555554444443 45677889999999999999999999999999999
Q ss_pred CCCC
Q 001059 662 LPPQ 665 (1170)
Q Consensus 662 ~~~~ 665 (1170)
|+..
T Consensus 287 ~~~~ 290 (362)
T 2bdw_A 287 WICN 290 (362)
T ss_dssp HHHT
T ss_pred ccCC
Confidence 9864
No 49
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=8.6e-42 Score=402.30 Aligned_cols=262 Identities=23% Similarity=0.379 Sum_probs=215.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
..+++|+++++||+|+||+||+|+++.+|+.||||+++..... ......+.+|..+|+++ +||||++++++|..
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~---- 124 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT---- 124 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC----
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE----
Confidence 4468999999999999999999999999999999999864322 22334678899999887 89999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ |+|..++.....+++..++.++.||+.||+|
T Consensus 125 ------------------------------------~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~ 168 (396)
T 4dc2_A 125 ------------------------------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 168 (396)
T ss_dssp ------------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.
T Consensus 169 LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------~~~~~~~gt~~Y~aPE~l~~-~~~~~ 232 (396)
T 4dc2_A 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGF 232 (396)
T ss_dssp HHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCBCGGGCCHHHHTT-CCBCT
T ss_pred HHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC---------------CccccccCCcccCCchhhcC-CCCCh
Confidence 999999999999999999999999999999997521110 11345689999999999998 57899
Q ss_pred cchhHHHHHHHHHhhc---CCCchh---------HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH--
Q 001059 589 KADMYSLGIVFFELWH---PFSTAM---------ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-- 654 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~---------~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-- 654 (1170)
++|||||||++|||++ ||.... .......+......+|. ..++++++||++||+.||.+||++
T Consensus 233 ~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~ 309 (396)
T 4dc2_A 233 SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---SLSVKAASVLKSFLNKDPKERLGCHP 309 (396)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTTSTTCST
T ss_pred HHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC---cCCHHHHHHHHHHhcCCHhHcCCCCC
Confidence 9999999999999997 775321 11222233333333443 467799999999999999999984
Q ss_pred ----HHHHhccCCCCchHHHHH
Q 001059 655 ----TELLQDALPPQMEYELLD 672 (1170)
Q Consensus 655 ----~eiL~~~~~~~~~~~~~~ 672 (1170)
+++++||||....|+.+.
T Consensus 310 ~~~~~ei~~Hpff~~i~w~~l~ 331 (396)
T 4dc2_A 310 QTGFADIQGHPFFRNVDWDMME 331 (396)
T ss_dssp TTHHHHHHHSTTTTTCCHHHHH
T ss_pred CCCHHHHhcCccccCCCHHHHH
Confidence 899999999999887653
No 50
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=5.2e-42 Score=393.49 Aligned_cols=261 Identities=28% Similarity=0.478 Sum_probs=215.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+.++|++++.||+|+||+||+|+++.+|+.||||++...... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------ 76 (323)
T 3tki_A 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRRE------ 76 (323)
T ss_dssp TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCCCCCCeEEEEEec------
Confidence 3678999999999999999999999999999999999754332 234568899999999999999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....|+|||||++ +|.+++.....+++..++.++.||+.||+|||
T Consensus 77 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH 122 (323)
T 3tki_A 77 ----------------------------------GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122 (323)
T ss_dssp ----------------------------------SSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4578999999975 99999988888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++.+...... ......+||+.|+|||++.+...++.++
T Consensus 123 ~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 189 (323)
T 3tki_A 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-------------RLLNKMCGTLPYVAPELLKRREFHAEPV 189 (323)
T ss_dssp HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE-------------CCBCSCCSCGGGSCHHHHHCSSBCHHHH
T ss_pred HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc-------------cccCCCccCcCccCcHHhccCCCCCCcc
Confidence 999999999999999999999999999999865322110 1123468999999999998754457899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||||||++|+|++ ||....................+.+...++++.+||++||+.||.+|||+.++++|+||.+.
T Consensus 190 DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 268 (323)
T 3tki_A 190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (323)
T ss_dssp HHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred cHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence 99999999999997 88655443333333333444455567788899999999999999999999999999999764
No 51
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3e-42 Score=384.85 Aligned_cols=261 Identities=25% Similarity=0.410 Sum_probs=198.4
Q ss_pred CCCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEee
Q 001059 347 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFE 425 (1170)
Q Consensus 347 ~~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e 425 (1170)
++..+..+++|++.+.||+|+||.||+|++..+|+.||+|++...... ......+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 84 (275)
T 2eue_A 5 SLADGAHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS 84 (275)
T ss_dssp ---CCCBCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred cCCCCCcccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec
Confidence 344566678999999999999999999999999999999999754422 2335678899999999999999999998732
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+||||++++|.+.+.....+++..++.++.||+.|
T Consensus 85 ----------------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 124 (275)
T 2eue_A 85 ----------------------------------------KDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 124 (275)
T ss_dssp ----------------------------------------SSCEEEEEECCCEEHHHHHHTSSSCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CCeEEEEehhcCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 3467999999999999999888889999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|+|||++||+||||||+|||++.++.+||+|||+++...... .....+||+.|+|||++.+...
T Consensus 125 l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~ 188 (275)
T 2eue_A 125 VEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----------------FLKTSCGSPNYAAPEVISGKLY 188 (275)
T ss_dssp HHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC-------------------------------CTTCCHHHHCC---
T ss_pred HHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCcc----------------cccCCCCCcCcCCceeeeCCCC
Confidence 999999999999999999999999999999999998653221 1133479999999999987544
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
++.++|||||||++|+|++ ||...................|. ..++++.+||++||+.||.+|||+.++++|+|
T Consensus 189 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~ 265 (275)
T 2eue_A 189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK---FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp --THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT---TSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHH
T ss_pred CCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCe
Confidence 5789999999999999997 88776655554444443333333 45679999999999999999999999999999
Q ss_pred CCCc
Q 001059 663 PPQM 666 (1170)
Q Consensus 663 ~~~~ 666 (1170)
|+..
T Consensus 266 f~~~ 269 (275)
T 2eue_A 266 FKVD 269 (275)
T ss_dssp HHTT
T ss_pred eccc
Confidence 8764
No 52
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6.9e-42 Score=397.13 Aligned_cols=257 Identities=26% Similarity=0.402 Sum_probs=221.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+|+.++||||++++++|.+
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------ 112 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD------ 112 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC------
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc------
Confidence 36899999999999999999999999999999999975321 11234678899999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||
T Consensus 113 ----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH 158 (350)
T 1rdq_E 113 ----------------------------------NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158 (350)
T ss_dssp ----------------------------------SSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 457899999996 699999998889999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++++||+|||+++..... ....+||+.|+|||++.+ ..++.++
T Consensus 159 ~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~~ 219 (350)
T 1rdq_E 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------TWTLCGTPEALAPEIILS-KGYNKAV 219 (350)
T ss_dssp HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC------------------BCCCEECGGGCCHHHHTT-CCBCTHH
T ss_pred HCCcccccCccceEEECCCCCEEEcccccceeccCC------------------cccccCCccccCHHHhcC-CCCCCcC
Confidence 999999999999999999999999999999864211 134589999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~ 662 (1170)
|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||+ ++++++|+|
T Consensus 220 DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296 (350)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred CEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence 99999999999996 88877666666555554444443 45779999999999999999998 999999999
Q ss_pred CCCchHHHH
Q 001059 663 PPQMEYELL 671 (1170)
Q Consensus 663 ~~~~~~~~~ 671 (1170)
|....+..+
T Consensus 297 f~~~~w~~~ 305 (350)
T 1rdq_E 297 FATTDWIAI 305 (350)
T ss_dssp GTTCCHHHH
T ss_pred cCCCCHHHH
Confidence 999887644
No 53
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=389.24 Aligned_cols=260 Identities=26% Similarity=0.390 Sum_probs=219.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----hhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
...+.|++.+.||+|+||.||+|+++.+|+.||||+++...... ...+.+.+|+.+|+.++||||++++++|..
T Consensus 8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-- 85 (326)
T 2y0a_A 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN-- 85 (326)
T ss_dssp CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--
T ss_pred CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe--
Confidence 34567999999999999999999999999999999997654321 135678999999999999999999998732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||
T Consensus 86 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al 127 (326)
T 2y0a_A 86 --------------------------------------KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127 (326)
T ss_dssp --------------------------------------SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHH
Confidence 456899999996 59999998888899999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCC----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
+|||++||+||||||+|||++.++ .+||+|||+++...... .....+||+.|+|||++.+
T Consensus 128 ~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~ 191 (326)
T 2y0a_A 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----------------EFKNIFGTPEFVAPEIVNY 191 (326)
T ss_dssp HHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS----------------CCCCCCSCTTTCCHHHHTT
T ss_pred HHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC----------------ccccccCCcCcCCceeecC
Confidence 999999999999999999999887 89999999998653211 1234579999999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
..++.++|||||||++|+|++ ||......+............+. .+...++.+.+||++||+.||.+|||+.++|
T Consensus 192 -~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 270 (326)
T 2y0a_A 192 -EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270 (326)
T ss_dssp -CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred -CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 568999999999999999997 88766655555444443444433 3456778999999999999999999999999
Q ss_pred hccCCCCchH
Q 001059 659 QDALPPQMEY 668 (1170)
Q Consensus 659 ~~~~~~~~~~ 668 (1170)
+|||+.....
T Consensus 271 ~hp~~~~~~~ 280 (326)
T 2y0a_A 271 QHPWIKPKDT 280 (326)
T ss_dssp HSTTTSCCSH
T ss_pred cCCCccCCcc
Confidence 9999988764
No 54
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.2e-41 Score=392.07 Aligned_cols=260 Identities=23% Similarity=0.385 Sum_probs=215.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~ 430 (1170)
.+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+++++ +||||++++++|..
T Consensus 7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~----- 81 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT----- 81 (345)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----
T ss_pred chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-----
Confidence 35799999999999999999999999999999999986543 334456788999999988 89999999998732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+||
T Consensus 82 -----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~L 126 (345)
T 3a8x_A 82 -----------------------------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 126 (345)
T ss_dssp -----------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 59999998888999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.+
T Consensus 127 H~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 190 (345)
T 3a8x_A 127 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFS 190 (345)
T ss_dssp HHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBCTH
T ss_pred HHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC---------------CcccccCCCccccCccccCC-CCCChH
Confidence 99999999999999999999999999999997532110 11245689999999999988 568999
Q ss_pred chhHHHHHHHHHhhc---CCCch---------hHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH---
Q 001059 590 ADMYSLGIVFFELWH---PFSTA---------MERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA--- 654 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~---------~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta--- 654 (1170)
+|||||||++|||++ ||... ........+......+|. ..++++.+||++||+.||.+||++
T Consensus 191 ~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~ 267 (345)
T 3a8x_A 191 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---SLSVKAASVLKSFLNKDPKERLGCHPQ 267 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTCCTT
T ss_pred HhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhcCCHhHCCCCCCc
Confidence 999999999999997 77531 111222223332333333 467799999999999999999995
Q ss_pred ---HHHHhccCCCCchHHHH
Q 001059 655 ---TELLQDALPPQMEYELL 671 (1170)
Q Consensus 655 ---~eiL~~~~~~~~~~~~~ 671 (1170)
.++++||||....|+.+
T Consensus 268 ~~~~~i~~hp~f~~~~w~~~ 287 (345)
T 3a8x_A 268 TGFADIQGHPFFRNVDWDMM 287 (345)
T ss_dssp THHHHHHTSGGGTTCCHHHH
T ss_pred CCHHHHhcCCccCCCCHHHH
Confidence 89999999999987654
No 55
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=383.52 Aligned_cols=263 Identities=27% Similarity=0.386 Sum_probs=209.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---hhhHHHHHHHHHHHHhcc---CCCceeEEEEEeec
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQ---HQHVVRYYQAWFET 426 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~l~---HpnIV~l~~~~~e~ 426 (1170)
..++|++++.||+|+||+||+|+++.+|+.||||++...... ......+.+|+.+++.++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457999999999999999999999999999999999754321 122346777888877775 99999999988542
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCC--CCHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVE 504 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~--l~e~~~~~i~~qI~~ 504 (1170)
. ......++++|||++++|.+++..... +++..++.++.||+.
T Consensus 87 ~-----------------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~ 131 (308)
T 3g33_A 87 R-----------------------------------TDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 131 (308)
T ss_dssp C-----------------------------------SSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHH
T ss_pred C-----------------------------------CCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHH
Confidence 1 012346899999999999999987654 999999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
||+|||++||+||||||+|||++.++.+||+|||+++...... ..+..+||+.|+|||++.+ .
T Consensus 132 al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~ 194 (308)
T 3g33_A 132 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM----------------ALTPVVVTLWYRAPEVLLQ-S 194 (308)
T ss_dssp HHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCC----------------CSGGGGCCCSSCCHHHHHT-S
T ss_pred HHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCc----------------ccCCccccccccCchHHcC-C
Confidence 9999999999999999999999999999999999998643211 1244689999999999987 5
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC------------------------ccccCCHHHH
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP------------------------SWVAKFSEQE 637 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~------------------------~~~~~~~e~~ 637 (1170)
.++.++|||||||++|+|++ ||...........+....+..+. .....++++.
T Consensus 195 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (308)
T 3g33_A 195 TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGA 274 (308)
T ss_dssp CCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHH
T ss_pred CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHH
Confidence 68999999999999999997 88776665555444332221111 1124567899
Q ss_pred HHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 638 SLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 638 ~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||.+||+.||.+|||+.++|+|+|+.+..
T Consensus 275 ~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 275 QLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred HHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 999999999999999999999999998754
No 56
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=5.4e-42 Score=397.21 Aligned_cols=261 Identities=28% Similarity=0.397 Sum_probs=219.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
...++|++.+.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|+.+ +||||++++++|..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~---- 89 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT---- 89 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC----
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe----
Confidence 346899999999999999999999999999999999975321 112345678899999887 99999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|
T Consensus 90 ------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~ 133 (345)
T 1xjd_A 90 ------------------------------------KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 133 (345)
T ss_dssp ------------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..++.
T Consensus 134 LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~ 197 (345)
T 1xjd_A 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---------------AKTNTFCGTPDYIAPEILLG-QKYNH 197 (345)
T ss_dssp HHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBCT
T ss_pred HHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC---------------CcccCCCCCcccCChhhhcC-CCCCC
Confidence 999999999999999999999999999999997532110 11245689999999999988 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH-HHHhccCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT-ELLQDALPP 664 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~-eiL~~~~~~ 664 (1170)
++|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||++. ++++||||.
T Consensus 198 ~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~ 274 (345)
T 1xjd_A 198 SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR---WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFR 274 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGT
T ss_pred hhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCc---ccCHHHHHHHHHHhcCCHhHcCCChHHHHcCcccc
Confidence 9999999999999996 88777666665555544444443 4567999999999999999999998 999999999
Q ss_pred CchHHHH
Q 001059 665 QMEYELL 671 (1170)
Q Consensus 665 ~~~~~~~ 671 (1170)
...|+.+
T Consensus 275 ~~~w~~l 281 (345)
T 1xjd_A 275 EINWEEL 281 (345)
T ss_dssp TCCHHHH
T ss_pred CCCHHHH
Confidence 9987654
No 57
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=9.8e-42 Score=410.59 Aligned_cols=261 Identities=28% Similarity=0.390 Sum_probs=209.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++++.||+|+||+||+|++..+|+.||||++...........++.+|+.+|+.++||||++++++|....
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----- 134 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK----- 134 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCC-----
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCC-----
Confidence 468999999999999999999999999999999999865545556678999999999999999999999884321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|+|||||+++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 135 -----------------------------~~~~~~~~~lv~E~~~~~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~ 183 (464)
T 3ttj_A 135 -----------------------------TLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 183 (464)
T ss_dssp -----------------------------STTTCCEEEEEEECCSEEHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------ccccCCeEEEEEeCCCCCHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0123457899999999988887754 499999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+|+..... ...+..+||+.|+|||++.+ ..|+.++||
T Consensus 184 ~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~----------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 246 (464)
T 3ttj_A 184 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 246 (464)
T ss_dssp TCCCCCCCGGGEEECTTSCEEECCCCCC-----C----------------CCC----CCCTTCCHHHHTT-CCCCTTHHH
T ss_pred CcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC----------------cccCCCcccccccCHHHHcC-CCCCHHHHH
Confidence 9999999999999999999999999999865321 11345689999999999998 579999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCc---------------------------ccc-----------
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS---------------------------WVA----------- 631 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~---------------------------~~~----------- 631 (1170)
|||||++|||++ ||.+....+....++...+..++. +..
T Consensus 247 wSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (464)
T 3ttj_A 247 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 326 (464)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCccccccccccccc
Confidence 999999999996 887665555444443322221110 000
Q ss_pred -CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 632 -KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 632 -~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.++++.+||++||..||.+|||++++|+||||...
T Consensus 327 ~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~ 362 (464)
T 3ttj_A 327 LKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 362 (464)
T ss_dssp HHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred ccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence 14578999999999999999999999999999854
No 58
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=398.41 Aligned_cols=261 Identities=25% Similarity=0.420 Sum_probs=216.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++++.||+|+||+||+|+++.+|+.||+|++..... .......+.+|+.+|+.++|||||+++++|..
T Consensus 12 v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~----- 86 (384)
T 4fr4_A 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD----- 86 (384)
T ss_dssp CCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----
Confidence 346899999999999999999999999999999999975321 12234678899999999999999999988832
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||. |+|.+++.....+++..++.++.||+.||+||
T Consensus 87 -----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~L 131 (384)
T 4fr4_A 87 -----------------------------------EEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYL 131 (384)
T ss_dssp -----------------------------------SSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 59999999888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCC
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKID 587 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~ 587 (1170)
|++||+||||||+|||++.++++||+|||+|+.+.... .....+||+.|+|||++.+. ..|+
T Consensus 132 H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~----------------~~~~~~gt~~Y~aPE~~~~~~~~~~~ 195 (384)
T 4fr4_A 132 QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET----------------QITTMAGTKPYMAPEMFSSRKGAGYS 195 (384)
T ss_dssp HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCGGGTCCCSSCCBC
T ss_pred HHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC----------------ceeccCCCccccCCeeeccCCCCCCC
Confidence 99999999999999999999999999999998653211 12456899999999998742 3489
Q ss_pred ccchhHHHHHHHHHhhc---CCCch---hHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-HHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTA---MERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-ATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~---~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-a~eiL~~ 660 (1170)
.++|||||||++|||++ ||... ...+............| ...++++.+||++||+.||.+||+ ++++++|
T Consensus 196 ~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 196 FAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP---SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp TTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred ccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC---CcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 99999999999999997 77532 22222222222223333 345679999999999999999998 9999999
Q ss_pred cCCCCchHHHH
Q 001059 661 ALPPQMEYELL 671 (1170)
Q Consensus 661 ~~~~~~~~~~~ 671 (1170)
|||....|+.+
T Consensus 273 p~f~~~~w~~~ 283 (384)
T 4fr4_A 273 PYMNDINWDAV 283 (384)
T ss_dssp GGGTTCCHHHH
T ss_pred hhhhcCCHHHH
Confidence 99999987654
No 59
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.2e-41 Score=389.11 Aligned_cols=259 Identities=24% Similarity=0.393 Sum_probs=199.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||+||+|.++.+|+.||||+++.... ......+.+|+.+|+.++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------- 73 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIH--------- 73 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEEC---------
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEE---------
Confidence 4689999999999999999999999999999999975432 223467889999999999999999999873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY------DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~------~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....+|+|||||+++|.+++... ..+++..++.++.||+.||+
T Consensus 74 -------------------------------~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~ 122 (317)
T 2pmi_A 74 -------------------------------TENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122 (317)
T ss_dssp -------------------------------CTTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------ECCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHH
Confidence 24578999999999999988654 35899999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++
T Consensus 123 ~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~ 187 (317)
T 2pmi_A 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV---------------NTFSSEVVTLWYRAPDVLMGSRTYS 187 (317)
T ss_dssp HHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC---------------CCCCCCCSCCTTCCHHHHTTCCCCC
T ss_pred HHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc---------------ccCCCCcccccccCchHhhCCCCCC
Confidence 9999999999999999999999999999999998653211 0123457999999999998755689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-------------------------------CccccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-------------------------------PSWVAKF 633 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-------------------------------~~~~~~~ 633 (1170)
.++|||||||++|||++ ||......+....+....+..+ ......+
T Consensus 188 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (317)
T 2pmi_A 188 TSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLD 267 (317)
T ss_dssp THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCC
Confidence 99999999999999997 7876655544433332111110 0011356
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
+++.+||.+||+.||.+|||+.++|+||||.+...
T Consensus 268 ~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 268 GNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred HHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 78999999999999999999999999999987653
No 60
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.4e-42 Score=391.50 Aligned_cols=255 Identities=22% Similarity=0.337 Sum_probs=217.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|.++.+|+.||+|++... ......+.+|+.+|+.++||||++++++|.+
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------- 72 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFES------- 72 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-------
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEec-------
Confidence 457999999999999999999999999999999998743 2345678899999999999999999998843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+|||
T Consensus 73 ---------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH 119 (321)
T 1tki_A 73 ---------------------------------MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119 (321)
T ss_dssp ---------------------------------TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999997 59999997654 6999999999999999999999
Q ss_pred hCCccccCCCCCceeecC--CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 511 GQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
++||+||||||+|||++. ++.+||+|||+++...... ......||+.|+|||++.+ ..++.
T Consensus 120 ~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~~ 182 (321)
T 1tki_A 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----------------NFRLLFTAPEYYAPEVHQH-DVVST 182 (321)
T ss_dssp HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC----------------EEEEEESCGGGSCHHHHTT-CEECH
T ss_pred HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC----------------ccccccCChhhcCcHHhcC-CCCCc
Confidence 999999999999999987 7899999999998653211 1134579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
++|||||||++|+|++ ||......+....+......++. .+...++++.+||.+||..||.+|||+.++|+|||+.
T Consensus 183 ~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~ 262 (321)
T 1tki_A 183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262 (321)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhc
Confidence 9999999999999996 88777766666555554444443 4557788999999999999999999999999999987
Q ss_pred Cch
Q 001059 665 QME 667 (1170)
Q Consensus 665 ~~~ 667 (1170)
+..
T Consensus 263 ~~~ 265 (321)
T 1tki_A 263 QKI 265 (321)
T ss_dssp SCG
T ss_pred cCc
Confidence 653
No 61
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.4e-41 Score=394.96 Aligned_cols=260 Identities=26% Similarity=0.381 Sum_probs=220.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~ 430 (1170)
.+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|+.+ +||||++++++|.
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~------ 91 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ------ 91 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE------
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE------
Confidence 46899999999999999999999999999999999975321 112345688999999988 8999999998873
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+|+|||||+ |+|.+++...+.+++..++.++.||+.||+||
T Consensus 92 ----------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~L 137 (353)
T 2i0e_A 92 ----------------------------------TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137 (353)
T ss_dssp ----------------------------------CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------cCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 59999999888999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..++.+
T Consensus 138 H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 201 (353)
T 2i0e_A 138 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---------------VTTKTFCGTPDYIAPEIIAY-QPYGKS 201 (353)
T ss_dssp HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBSTH
T ss_pred HHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC---------------cccccccCCccccChhhhcC-CCcCCc
Confidence 99999999999999999999999999999997532110 11245689999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhcc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDA 661 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~ 661 (1170)
+|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+|| ++.++++||
T Consensus 202 ~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~ 278 (353)
T 2i0e_A 202 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 278 (353)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred ccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence 999999999999996 88877766666666655544543 4677999999999999999999 479999999
Q ss_pred CCCCchHHHH
Q 001059 662 LPPQMEYELL 671 (1170)
Q Consensus 662 ~~~~~~~~~~ 671 (1170)
||....|+.+
T Consensus 279 ~f~~~~w~~l 288 (353)
T 2i0e_A 279 FFRYIDWEKL 288 (353)
T ss_dssp GGTTCCHHHH
T ss_pred cccCCCHHHH
Confidence 9999987654
No 62
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.2e-41 Score=383.09 Aligned_cols=259 Identities=24% Similarity=0.409 Sum_probs=209.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++++.||+|+||+||+|++..+|+.||||++............+.+|+.++++++||||++++++|..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 73 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-------- 73 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec--------
Confidence 578999999999999999999999999999999997665555556778899999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||++ +|..++.....+++..++.++.||+.||+|||++
T Consensus 74 --------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~ 121 (311)
T 4agu_A 74 --------------------------------KRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121 (311)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3568999999986 6777777777899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++||
T Consensus 122 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 186 (311)
T 4agu_A 122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS---------------DYYDDEVATRWYRSPELLVGDTQYGPPVDV 186 (311)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECC---------------------------GGGCCHHHHHTCSCCCTHHHH
T ss_pred CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc---------------cccCCCcCCccccChHHHhcCCCCCcchhh
Confidence 99999999999999999999999999998653221 012345799999999999875678999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-------------------CC---------CccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LP---------PSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p---------~~~~~~~~e~~~LI~ 641 (1170)
|||||++|+|++ ||................+. .+ ..+...++++.+||+
T Consensus 187 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 266 (311)
T 4agu_A 187 WAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLK 266 (311)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHH
Confidence 999999999997 77665544433222211111 11 012356778999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||+.||.+|||++++++||||.+..
T Consensus 267 ~~L~~dP~~Rpt~~ell~hp~f~~~~ 292 (311)
T 4agu_A 267 GCLHMDPTERLTCEQLLHHPYFENIR 292 (311)
T ss_dssp HHCCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred HHccCChhhcCCHHHHhcChHHHhcc
Confidence 99999999999999999999999875
No 63
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-42 Score=399.85 Aligned_cols=257 Identities=24% Similarity=0.359 Sum_probs=210.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+.+++|++.+.||+|+||+||+|++..+|+.||||++..... .......+.+|+.+|+.++||||+++++++..
T Consensus 5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~---- 80 (336)
T 3h4j_B 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT---- 80 (336)
T ss_dssp CSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe----
Confidence 3457899999999999999999999999999999999974321 11123578899999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+||||++|+|.+.+.....+++..++.++.||+.||+||
T Consensus 81 ------------------------------------~~~~~lv~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~L 124 (336)
T 3h4j_B 81 ------------------------------------PTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYC 124 (336)
T ss_dssp ------------------------------------SSEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 35689999999999999998888999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||++....... .....+||+.|+|||++.+...++.+
T Consensus 125 H~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~ 188 (336)
T 3h4j_B 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN----------------FLKTSCGSPNYAAPEVINGKLYAGPE 188 (336)
T ss_dssp HHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB----------------TTCCCTTSTTTSCGGGSCCSGGGCHH
T ss_pred HHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc----------------ccccccCCcCcCCHHHHcCCCCCCCc
Confidence 99999999999999999999999999999998653221 12345899999999999885444789
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+|||||||++|+|++ ||.............. .........++++.+||++||+.||.+|||+.++++||||...
T Consensus 189 ~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~---~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 189 VDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS---CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCS---SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred cchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHc---CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 999999999999997 7765432221111111 1112223457899999999999999999999999999998653
No 64
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-41 Score=384.54 Aligned_cols=255 Identities=36% Similarity=0.539 Sum_probs=208.0
Q ss_pred CCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeec
Q 001059 348 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 426 (1170)
Q Consensus 348 ~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~ 426 (1170)
.+...+.++|+++++||+|+||+||+|+++.+|+.||||++..............+|+..+..+ +||||++++++|.+
T Consensus 50 ~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~- 128 (311)
T 3p1a_A 50 RPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE- 128 (311)
T ss_dssp SSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-
T ss_pred CccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-
Confidence 3445566889999999999999999999999999999999876555555555667777777666 99999999998843
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||+++|.+++...+ .+++..++.++.||+.|
T Consensus 129 ---------------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~a 169 (311)
T 3p1a_A 129 ---------------------------------------GGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLA 169 (311)
T ss_dssp ---------------------------------------TTEEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCEEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999887644 59999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|+|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ .
T Consensus 170 L~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~--~ 231 (311)
T 3p1a_A 170 LAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG----------------AGEVQEGDPRYMAPELLQG--S 231 (311)
T ss_dssp HHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----------------------CCCCCGGGCCGGGGGT--C
T ss_pred HHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC----------------CCcccCCCccccCHhHhcC--C
Confidence 999999999999999999999999999999999987643211 1234579999999999986 5
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
++.++|||||||++|||++ ||....... .+. ....+ ......++++.+||.+||+.||.+|||+.++|+||
T Consensus 232 ~~~~~DiwslG~il~el~~g~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 306 (311)
T 3p1a_A 232 YGTAADVFSLGLTILEVACNMELPHGGEGWQ----QLR-QGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALP 306 (311)
T ss_dssp CSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH----HHT-TTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCccHHH----HHh-ccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCc
Confidence 8999999999999999997 333332221 122 22223 23445678999999999999999999999999999
Q ss_pred CCCC
Q 001059 662 LPPQ 665 (1170)
Q Consensus 662 ~~~~ 665 (1170)
|+++
T Consensus 307 ~~~~ 310 (311)
T 3p1a_A 307 VLRQ 310 (311)
T ss_dssp GGSC
T ss_pred cccC
Confidence 9975
No 65
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.1e-41 Score=412.68 Aligned_cols=261 Identities=29% Similarity=0.509 Sum_probs=220.6
Q ss_pred CCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 348 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 348 ~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
...+.+.++|++++.||+|+||+||+|+++.+|+.||||++............+.+|+.+|++++||||+++++++..
T Consensus 15 ~~~g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-- 92 (486)
T 3mwu_A 15 YFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-- 92 (486)
T ss_dssp TTCCHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--
T ss_pred cccCChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc--
Confidence 345677899999999999999999999999999999999997543223345678999999999999999999998732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||. ++|.+.+.....+++..++.++.||+.||
T Consensus 93 --------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al 134 (486)
T 3mwu_A 93 --------------------------------------SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134 (486)
T ss_dssp --------------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 457899999996 59999998888999999999999999999
Q ss_pred HHHHhCCccccCCCCCceeec---CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFD---ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~---~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
+|||++||+||||||+|||++ .++.+||+|||+++...... .....+||+.|+|||++.+
T Consensus 135 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~- 197 (486)
T 3mwu_A 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----------------KMKDRIGTAYYIAPEVLRG- 197 (486)
T ss_dssp HHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--------------------CCTTGGGGCCGGGGGS-
T ss_pred HHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC----------------ccCCCcCCCCCCCHHHhCC-
Confidence 999999999999999999995 45679999999998653211 1234579999999999987
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
.|+.++|||||||++|+|++ ||......+....+....... .+.+...++++++||++||+.||.+|||+.++|+
T Consensus 198 -~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 198 -TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 48999999999999999997 887777666665555444433 3466788899999999999999999999999999
Q ss_pred ccCCCCc
Q 001059 660 DALPPQM 666 (1170)
Q Consensus 660 ~~~~~~~ 666 (1170)
|||+.+.
T Consensus 277 hp~~~~~ 283 (486)
T 3mwu_A 277 HPWIQKY 283 (486)
T ss_dssp CHHHHHT
T ss_pred CHhhccC
Confidence 9997643
No 66
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-41 Score=394.81 Aligned_cols=262 Identities=26% Similarity=0.409 Sum_probs=210.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++++.||+|+||.||+|.+..+|+.||||++...........++.+|+.+|+.++||||+++++++.....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~---- 98 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDET---- 98 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSS----
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCc----
Confidence 3578999999999999999999999999999999997655555566789999999999999999999998743210
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
......+|+||||++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 99 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~ 147 (367)
T 1cm8_A 99 ------------------------------LDDFTDFYLVMPFMGTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAA 147 (367)
T ss_dssp ------------------------------TTTCCCCEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cccCceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 012245799999998899998876 5799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++.... ..+..+||+.|+|||++.+...++.++||
T Consensus 148 ~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 209 (367)
T 1cm8_A 148 GIIHRDLKPGNLAVNEDCELKILDFGLARQADS------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDI 209 (367)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEECCS------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHH
T ss_pred CccccCcCHHHEEEcCCCCEEEEeeeccccccc------------------ccCcCcCCCCcCCHHHHhCCCCCChhhhH
Confidence 999999999999999999999999999986421 12446899999999999875679999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~e~~~LI~ 641 (1170)
|||||++|||++ ||...........+....+..+ ..+...++++.+||.
T Consensus 210 wslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 289 (367)
T 1cm8_A 210 WSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLE 289 (367)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHH
Confidence 999999999997 7876555444433332222111 122345789999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||+.||.+|||+.++|+||||....
T Consensus 290 ~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 290 KMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHccCChhHCCCHHHHhcChHHHhhc
Confidence 99999999999999999999998764
No 67
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=7e-41 Score=375.00 Aligned_cols=260 Identities=25% Similarity=0.437 Sum_probs=221.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+.+.++|++.+.||+|+||.||+|.++.+|+.||+|++..........+.+.+|+.++++++||||+++++++.+
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 76 (284)
T 3kk8_A 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE----- 76 (284)
T ss_dssp CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-----
Confidence 345689999999999999999999999999999999998766666667789999999999999999999998732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|++||||+ ++|.+.+.....+++..++.++.||+.||+||
T Consensus 77 -----------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~l 121 (284)
T 3kk8_A 77 -----------------------------------ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121 (284)
T ss_dssp -----------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 456799999997 59999998888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCC---EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 510 HGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
|++||+||||||+|||++.++. +||+|||++....... ......||+.|+|||++.+ ..+
T Consensus 122 H~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~ 184 (284)
T 3kk8_A 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----------------AWHGFAGTPGYLSPEVLKK-DPY 184 (284)
T ss_dssp HHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC----------------BCCCSCSCGGGCCHHHHTT-CCB
T ss_pred HHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc----------------cccCCCCCcCCcCchhhcC-CCC
Confidence 9999999999999999987655 9999999997543211 1234579999999999987 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
+.++||||||+++|+|++ ||...................+ +.+...++++.+||.+||+.||.+|||+.++++|||
T Consensus 185 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (284)
T 3kk8_A 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 264 (284)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHH
T ss_pred CcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCcc
Confidence 999999999999999997 8877666555555444443333 344567889999999999999999999999999998
Q ss_pred CCCch
Q 001059 663 PPQME 667 (1170)
Q Consensus 663 ~~~~~ 667 (1170)
+.+..
T Consensus 265 ~~~~~ 269 (284)
T 3kk8_A 265 ICNRE 269 (284)
T ss_dssp HHSCC
T ss_pred ccCCh
Confidence 86653
No 68
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.8e-41 Score=394.18 Aligned_cols=262 Identities=26% Similarity=0.374 Sum_probs=213.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHH-HHhccCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~i-L~~l~HpnIV~l~~~~~e~~~ 428 (1170)
....++|++++.||+|+||+||+|+++.+++.||||+++..... ......+.+|..+ ++.++||||++++++|..
T Consensus 34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~--- 110 (373)
T 2r5t_A 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT--- 110 (373)
T ss_dssp TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC---
T ss_pred CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe---
Confidence 34568999999999999999999999999999999999765422 2234456777776 577899999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|+|||||+ |+|.+++.....+++..++.++.||+.||+
T Consensus 111 -------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~ 153 (373)
T 2r5t_A 111 -------------------------------------ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG 153 (373)
T ss_dssp -------------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 457899999997 599999998889999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++++||+|||+++...... ......+||+.|+|||++.+ ..|+
T Consensus 154 ~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~ 217 (373)
T 2r5t_A 154 YLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN---------------STTSTFCGTPEYLAPEVLHK-QPYD 217 (373)
T ss_dssp HHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC---------------CCCCSBSCCCCCCCHHHHTT-CCCC
T ss_pred HHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC---------------CccccccCCccccCHHHhCC-CCCC
Confidence 9999999999999999999999999999999998532111 11245689999999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~ 660 (1170)
.++|||||||++|||++ ||......+....++.....+++ ..++++++||++||+.||.+||++ .++++|
T Consensus 218 ~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h 294 (373)
T 2r5t_A 218 RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP---NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH 294 (373)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCS---SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred chhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC---CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence 99999999999999996 88877766666666654444443 456799999999999999999986 699999
Q ss_pred cCCCCchHHHH
Q 001059 661 ALPPQMEYELL 671 (1170)
Q Consensus 661 ~~~~~~~~~~~ 671 (1170)
+||....|+.+
T Consensus 295 ~~f~~~~w~~l 305 (373)
T 2r5t_A 295 VFFSLINWDDL 305 (373)
T ss_dssp GGGTTCCHHHH
T ss_pred ccccCCCHHHH
Confidence 99999987654
No 69
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.1e-41 Score=406.45 Aligned_cols=264 Identities=23% Similarity=0.384 Sum_probs=221.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|+++++||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+++.++||||++++++|.+
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~------- 145 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD------- 145 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC-------
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-------
Confidence 4789999999999999999999999999999999974211 01112347889999999999999999998832
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ |+|.+++.. ...+++..++.++.||+.||+|||
T Consensus 146 ---------------------------------~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH 192 (437)
T 4aw2_A 146 ---------------------------------DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192 (437)
T ss_dssp ---------------------------------SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999995 699999987 467999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc----CCCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ----GWPKI 586 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~----~~~~~ 586 (1170)
++||+||||||+|||++.++++||+|||+|+...... ....+..+||+.|+|||++. +...|
T Consensus 193 ~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~--------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 258 (437)
T 4aw2_A 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--------------TVQSSVAVGTPDYISPEILQAMEGGKGRY 258 (437)
T ss_dssp HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--------------CEECCSCCSCGGGCCHHHHHHHHTSCCEE
T ss_pred hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC--------------CcccccccCCcCeeChHHHhhcccCCCCC
Confidence 9999999999999999999999999999997643211 11224468999999999987 23568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHh
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQ 659 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~ 659 (1170)
+.++|||||||++|||++ ||......+....++.. ...+|..+...++++++||++||+.+|++ ||+++++++
T Consensus 259 ~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 259 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 999999999999999997 88877666665555432 34566666678899999999999999888 999999999
Q ss_pred ccCCCCchHHHH
Q 001059 660 DALPPQMEYELL 671 (1170)
Q Consensus 660 ~~~~~~~~~~~~ 671 (1170)
||||....|+.+
T Consensus 339 Hpff~~i~w~~l 350 (437)
T 4aw2_A 339 HPFFSGIDWDNI 350 (437)
T ss_dssp SGGGTTCCTTTG
T ss_pred CCccCCCCHHHH
Confidence 999999988755
No 70
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.7e-41 Score=408.92 Aligned_cols=259 Identities=28% Similarity=0.510 Sum_probs=215.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+...++|++++.||+|+||+||+|+++.+|..||||+++...........+.+|+.+|+.++||||++++++|.+
T Consensus 33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----- 107 (494)
T 3lij_A 33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED----- 107 (494)
T ss_dssp CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-----
T ss_pred CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----
Confidence 445578999999999999999999999999999999998655444446789999999999999999999998832
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+||
T Consensus 108 -----------------------------------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 152 (494)
T 3lij_A 108 -----------------------------------KRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYL 152 (494)
T ss_dssp -----------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 59999998888999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 510 HGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
|++||+||||||+|||++.. +.+||+|||+|+...... .....+||+.|+|||++.+ .|
T Consensus 153 H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~----------------~~~~~~gt~~y~aPE~l~~--~~ 214 (494)
T 3lij_A 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK----------------KMKERLGTAYYIAPEVLRK--KY 214 (494)
T ss_dssp HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB----------------CBCCCCSCTTTCCHHHHTT--CB
T ss_pred HHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc----------------cccccCCCcCeeCHHHHcc--cC
Confidence 99999999999999999764 559999999998653221 1234579999999999875 58
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
+.++|||||||++|+|++ ||......+....+......++ +.+...++++.+||++||+.||.+|||+.++|+|||
T Consensus 215 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~ 294 (494)
T 3lij_A 215 DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW 294 (494)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred CCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcc
Confidence 999999999999999996 8887777666665555444443 456778899999999999999999999999999999
Q ss_pred CCCch
Q 001059 663 PPQME 667 (1170)
Q Consensus 663 ~~~~~ 667 (1170)
+....
T Consensus 295 ~~~~~ 299 (494)
T 3lij_A 295 IKEMC 299 (494)
T ss_dssp HHHHH
T ss_pred cccCc
Confidence 87653
No 71
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5.6e-41 Score=400.45 Aligned_cols=283 Identities=25% Similarity=0.379 Sum_probs=213.5
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.....++|++.+.||+|+||+||+|+++.+|+.||||+++..........++.+|+.+|+.++||||+++++++....
T Consensus 21 ~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-- 98 (432)
T 3n9x_A 21 NVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDD-- 98 (432)
T ss_dssp GCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC--
T ss_pred cceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCC--
Confidence 344568999999999999999999999999999999999765555566678999999999999999999999874321
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
......+|+|||||+++|.+++.....+++..++.++.||+.||+||
T Consensus 99 ---------------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~L 145 (432)
T 3n9x_A 99 ---------------------------------LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145 (432)
T ss_dssp ---------------------------------TTTCCCEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCcCCeEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 01235689999999999999999888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCC------CC-CCCCCccccCcccccCccCCCcccccC
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA------FP-TDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
|++||+||||||+|||++.++.+||+|||+|+............ .+ ..........+..+||++|+|||++..
T Consensus 146 H~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~ 225 (432)
T 3n9x_A 146 HESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL 225 (432)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTT
T ss_pred HHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc
Confidence 99999999999999999999999999999998764322110000 00 000000112366799999999999765
Q ss_pred CCCCCccchhHHHHHHHHHhhc-------------CCC-chh-----------------HHHHHHHHhhhcCC-------
Q 001059 583 WPKIDEKADMYSLGIVFFELWH-------------PFS-TAM-----------------ERQIVLSDLKQKGE------- 624 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt-------------Pf~-~~~-----------------~~~~~~~~l~~~~~------- 624 (1170)
...|+.++|||||||++|||++ |+. +.. .......+....+.
T Consensus 226 ~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~ 305 (432)
T 3n9x_A 226 QENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLK 305 (432)
T ss_dssp CSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred CCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHH
Confidence 5679999999999999999994 221 110 01111111110010
Q ss_pred -----------------CC----CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 625 -----------------LP----PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 625 -----------------~p----~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.+ ..+...++++.+||++||+.||.+|||++++|+||||....
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 369 (432)
T 3n9x_A 306 NINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR 369 (432)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTC
T ss_pred hccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhcc
Confidence 01 11245678999999999999999999999999999998864
No 72
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.8e-41 Score=389.00 Aligned_cols=271 Identities=22% Similarity=0.393 Sum_probs=217.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+++|++++.||+|+||+||+|+++.+|+.||||++............+.+|+.+|+.++||||+++++++......
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--- 91 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP--- 91 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccc---
Confidence 46899999999999999999999999999999999976655444556788999999999999999999998543100
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.......+|+|||||+++|.+.+... ..+++..++.++.||+.||+|||+
T Consensus 92 -----------------------------~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 142 (351)
T 3mi9_A 92 -----------------------------YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 142 (351)
T ss_dssp ----------------------------------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------cccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00124578999999999988887654 569999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+|+.+...... ........+||+.|+|||++.+...++.++|
T Consensus 143 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~D 211 (351)
T 3mi9_A 143 NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS-----------QPNRYTNRVVTLWYRPPELLLGERDYGPPID 211 (351)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSS-----------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHH
T ss_pred CCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccc-----------cccccCCcccccCccCchhhcCCCCCCcHhH
Confidence 99999999999999999999999999999865422111 0112345689999999999987566899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCc-ccc----------------------------CCHHHHHH
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS-WVA----------------------------KFSEQESL 639 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~-~~~----------------------------~~~e~~~L 639 (1170)
||||||++|||++ ||...........+....+..++. +.. .++++.+|
T Consensus 212 iwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 291 (351)
T 3mi9_A 212 LWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDL 291 (351)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHH
Confidence 9999999999997 777665555444443333333221 111 25678999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|.+||+.||.+|||+.++|+||||...
T Consensus 292 i~~~L~~dP~~R~t~~e~l~hp~f~~~ 318 (351)
T 3mi9_A 292 IDKLLVLDPAQRIDSDDALNHDFFWSD 318 (351)
T ss_dssp HHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred HHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence 999999999999999999999999764
No 73
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.4e-41 Score=391.21 Aligned_cols=258 Identities=27% Similarity=0.411 Sum_probs=201.9
Q ss_pred CCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 348 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 348 ~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
.+.....++|++++.||+|+||+||+|+++.+|+.||||++..... ....+.+|+.+++.++||||++++++|..
T Consensus 13 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-- 87 (361)
T 3uc3_A 13 MPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILT-- 87 (361)
T ss_dssp CCCCCCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEEC--
T ss_pred ccCCCCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEee--
Confidence 3445556899999999999999999999999999999999975433 23568899999999999999999998843
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||
T Consensus 88 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L 129 (361)
T 3uc3_A 88 --------------------------------------PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGV 129 (361)
T ss_dssp --------------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 456899999996 59999998888999999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCC--EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARND--IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~--vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
+|||++||+||||||+|||++.++. +||+|||+|+...... .....+||+.|+|||++.+..
T Consensus 130 ~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~ 193 (361)
T 3uc3_A 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS----------------QPKSTVGTPAYIAPEVLLRQE 193 (361)
T ss_dssp HHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------------------------------CTTSCHHHHHCSS
T ss_pred HHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC----------------CCCCCcCCCCcCChhhhcCCC
Confidence 9999999999999999999987765 9999999997432111 123457999999999998744
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhH----HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAME----RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~----~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
..+.++|||||||++|+|++ ||..... .............+ +.....++++.+||++||+.||.+|||+.++
T Consensus 194 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 272 (361)
T 3uc3_A 194 YDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSI-PDDIRISPECCHLISRIFVADPATRISIPEI 272 (361)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCC-CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred CCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCC-CCcCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 33455999999999999996 7765433 22222222222223 3334567899999999999999999999999
Q ss_pred HhccCCCC
Q 001059 658 LQDALPPQ 665 (1170)
Q Consensus 658 L~~~~~~~ 665 (1170)
++||||..
T Consensus 273 l~hp~f~~ 280 (361)
T 3uc3_A 273 KTHSWFLK 280 (361)
T ss_dssp HTSHHHHT
T ss_pred HhCcchhc
Confidence 99999844
No 74
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=9.4e-41 Score=383.58 Aligned_cols=259 Identities=27% Similarity=0.415 Sum_probs=209.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
..++|++.+.||+|+||+||+|++. .+|+.||+|+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-- 92 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT-- 92 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC--
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc--
Confidence 3578999999999999999999985 6899999999975432 12234567899999999999999999988732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||
T Consensus 93 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al 134 (327)
T 3a62_A 93 --------------------------------------GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134 (327)
T ss_dssp --------------------------------------SSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 356899999997 59999999888899999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..+
T Consensus 135 ~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~ 198 (327)
T 3a62_A 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---------------TVTHTFCGTIEYMAPEILMR-SGH 198 (327)
T ss_dssp HHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------------------------CTTSSCCTTSCHHHHTT-SCC
T ss_pred HHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC---------------ccccccCCCcCccCHhhCcC-CCC
Confidence 99999999999999999999999999999999997542111 01234579999999999987 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHH
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELL 658 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL 658 (1170)
+.++|||||||++|||++ ||...........+......+|+ ..++++.+||++||..||.+|| ++.+++
T Consensus 199 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l 275 (327)
T 3a62_A 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP---YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQ 275 (327)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCT---TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHH
T ss_pred CCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHH
Confidence 999999999999999996 88776666655555554444443 4567999999999999999999 899999
Q ss_pred hccCCCCchHHH
Q 001059 659 QDALPPQMEYEL 670 (1170)
Q Consensus 659 ~~~~~~~~~~~~ 670 (1170)
+||||....++.
T Consensus 276 ~hp~f~~~~~~~ 287 (327)
T 3a62_A 276 AHPFFRHINWEE 287 (327)
T ss_dssp HSGGGSSCCHHH
T ss_pred cCCcccCCCHHH
Confidence 999999887654
No 75
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7.6e-41 Score=376.14 Aligned_cols=258 Identities=27% Similarity=0.450 Sum_probs=211.3
Q ss_pred CCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 349 ~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..+...++|.+.+.||+|+||+||+|.++.+|..||+|++..... ....+.+.+|+.+|+.++||||++++++|..
T Consensus 16 ~~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 91 (285)
T 3is5_A 16 FQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFED--- 91 (285)
T ss_dssp ESSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred CCCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheec---
Confidence 345667899999999999999999999999999999999976532 2335678999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~ 503 (1170)
...+|+|||||+ ++|.+.+.. ...+++..++.++.||+
T Consensus 92 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 134 (285)
T 3is5_A 92 -------------------------------------YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM 134 (285)
T ss_dssp -------------------------------------SSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHH
Confidence 456899999997 489888754 36799999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceee---cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi---~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 580 (1170)
.||+|||++||+||||||+|||+ +.++.+||+|||+++...... ......||+.|+|||++
T Consensus 135 ~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~t~~y~aPE~~ 198 (285)
T 3is5_A 135 NALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE----------------HSTNAAGTALYMAPEVF 198 (285)
T ss_dssp HHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--------------------------CTTGGGCCHHHH
T ss_pred HHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc----------------cCcCcccccCcCChHHh
Confidence 99999999999999999999999 445789999999997653211 12345799999999998
Q ss_pred cCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 581 QGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 581 ~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
.+ .++.++|||||||++|+|++ ||......+............+......++++.+||++||+.||.+|||+.++
T Consensus 199 ~~--~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~ 276 (285)
T 3is5_A 199 KR--DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQV 276 (285)
T ss_dssp TT--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred cc--CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 75 58999999999999999996 88776655555444444444444445567899999999999999999999999
Q ss_pred HhccCCCC
Q 001059 658 LQDALPPQ 665 (1170)
Q Consensus 658 L~~~~~~~ 665 (1170)
|+||||++
T Consensus 277 l~hp~f~~ 284 (285)
T 3is5_A 277 LHHEWFKQ 284 (285)
T ss_dssp HTSGGGGC
T ss_pred hcCHHhhc
Confidence 99999975
No 76
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.8e-41 Score=380.61 Aligned_cols=257 Identities=24% Similarity=0.381 Sum_probs=204.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh------------------------hhHHHHHHHHHHH
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL------------------------PVNDRILREVATL 408 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~------------------------~~~~~~~~Ev~iL 408 (1170)
.+++|++.+.||+|+||+||+|++..+|+.||||++....... ...+.+.+|+.+|
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 4689999999999999999999999999999999997543211 1234688999999
Q ss_pred HhccCCCceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc
Q 001059 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY 487 (1170)
Q Consensus 409 ~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~ 487 (1170)
+.++||||+++++++.+. ....+|+|||||++ +|.+++ ..
T Consensus 91 ~~l~h~~iv~~~~~~~~~--------------------------------------~~~~~~lv~e~~~~~~l~~~~-~~ 131 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDP--------------------------------------NEDHLYMVFELVNQGPVMEVP-TL 131 (298)
T ss_dssp HTCCCTTBCCEEEEEECS--------------------------------------SSSEEEEEEECCTTCBSCCSS-CS
T ss_pred HhCCCCCCCeEEEEEEcC--------------------------------------CCCEEEEEEecCCCCcHHHHh-hc
Confidence 999999999999987432 24578999999974 776644 34
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcc
Q 001059 488 DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 567 (1170)
Q Consensus 488 ~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (1170)
..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... .....
T Consensus 132 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~ 196 (298)
T 2zv2_A 132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD---------------ALLSN 196 (298)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSS---------------CEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCcccccccc---------------ccccC
Confidence 579999999999999999999999999999999999999999999999999998653211 01134
Q ss_pred cccCccCCCcccccCCCC--CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHH
Q 001059 568 QVGTYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 642 (1170)
Q Consensus 568 ~~GT~~Y~APE~l~~~~~--~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~ 642 (1170)
..||+.|+|||++.+... ++.++|||||||++|+|++ ||................... +.....++++.+||.+
T Consensus 197 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~ 275 (298)
T 2zv2_A 197 TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEF-PDQPDIAEDLKDLITR 275 (298)
T ss_dssp CCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-CSSSCCCHHHHHHHHH
T ss_pred CcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCC-CCccccCHHHHHHHHH
Confidence 579999999999987432 4788999999999999996 887655444433333322222 3344677899999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCC
Q 001059 643 LMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
||+.||.+|||+.++++||||.
T Consensus 276 ~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 276 MLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HTCSCTTTSCCHHHHTTCHHHH
T ss_pred HhhcChhhCCCHHHHhcCcccc
Confidence 9999999999999999999874
No 77
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.8e-41 Score=401.58 Aligned_cols=261 Identities=23% Similarity=0.380 Sum_probs=216.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++++.||+|+||+||+|+++.+|+.||+|+++.... .......+.+|+.+++.++|||||+++++|.
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-------- 139 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-------- 139 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------
Confidence 4789999999999999999999999999999999974211 0111234788999999999999999999883
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
+...+|+|||||+ |+|.+++.. ..+++..++.++.||+.||+|||+
T Consensus 140 --------------------------------~~~~~~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~ 186 (410)
T 3v8s_A 140 --------------------------------DDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHS 186 (410)
T ss_dssp --------------------------------CSSEEEEEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------ECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2467899999996 599998865 469999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC---CCc
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK---IDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~---~~~ 588 (1170)
+||+||||||+|||++.++++||+|||+|+...... .....+.+||+.|+|||++.+... |+.
T Consensus 187 ~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~--------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~ 252 (410)
T 3v8s_A 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 252 (410)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--------------EEECCSCCSCGGGCCHHHHHTTTTTCEEET
T ss_pred CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC--------------cccccCCcCCccccCHHHhhccCCCcCCCC
Confidence 999999999999999999999999999998653221 112245689999999999986332 789
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhcc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDA 661 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~~ 661 (1170)
++|||||||++|||++ ||...........++... ..+| .+...++++++||++||+.+|.+ ||++++|++||
T Consensus 253 ~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p-~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 253 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP-DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC-TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred cceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCC-CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCc
Confidence 9999999999999996 888777666665555432 2233 34467889999999999999988 99999999999
Q ss_pred CCCCchHHH
Q 001059 662 LPPQMEYEL 670 (1170)
Q Consensus 662 ~~~~~~~~~ 670 (1170)
||....|+.
T Consensus 332 ~f~~~~w~~ 340 (410)
T 3v8s_A 332 FFKNDQWAW 340 (410)
T ss_dssp GGCCSSCCS
T ss_pred cccCCCHHH
Confidence 999987654
No 78
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.9e-41 Score=403.40 Aligned_cols=259 Identities=27% Similarity=0.384 Sum_probs=211.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++++.||+|+||.||+|+++.+|+.||||+++... ........+.+|+.+|+.++||||++++++|..
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~------ 219 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT------ 219 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE------
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee------
Confidence 3578999999999999999999999999999999997532 122334567899999999999999999998843
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 220 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH 265 (446)
T 4ejn_A 220 ----------------------------------HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265 (446)
T ss_dssp ----------------------------------TTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 356899999997 599999988889999999999999999999999
Q ss_pred h-CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 511 G-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 511 s-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
+ +||+||||||+|||++.++.+||+|||+|+...... ......+||+.|+|||++.+ ..|+.+
T Consensus 266 ~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 329 (446)
T 4ejn_A 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRA 329 (446)
T ss_dssp HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--------------------CCSSSCGGGCCHHHHHT-SCCCTH
T ss_pred hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC---------------cccccccCCccccCHhhcCC-CCCCCc
Confidence 8 999999999999999999999999999997532111 11245689999999999987 579999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhcc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDA 661 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~ 661 (1170)
+|||||||++|||++ ||...........+......+|. ..++++.+||.+||+.||.+|| +++++++||
T Consensus 330 ~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 330 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR---TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred cchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 999999999999997 88776666655555554444443 4567999999999999999999 999999999
Q ss_pred CCCCchHHH
Q 001059 662 LPPQMEYEL 670 (1170)
Q Consensus 662 ~~~~~~~~~ 670 (1170)
||....++.
T Consensus 407 ~f~~~~~~~ 415 (446)
T 4ejn_A 407 FFAGIVWQH 415 (446)
T ss_dssp GGTTCCHHH
T ss_pred cccCCCHHH
Confidence 999987654
No 79
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=400.91 Aligned_cols=263 Identities=25% Similarity=0.400 Sum_probs=216.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|..++||||++++++|.
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~-------- 131 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ-------- 131 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE--------
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe--------
Confidence 4789999999999999999999999999999999974221 1112345788999999999999999998873
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+..++|+|||||+ |+|.+++...+ .+++..++.++.||+.||+|||
T Consensus 132 --------------------------------~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH 179 (412)
T 2vd5_A 132 --------------------------------DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179 (412)
T ss_dssp --------------------------------CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2467899999995 69999998754 7999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC------CC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG------WP 584 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~ 584 (1170)
++||+||||||+|||++.++++||+|||+|+...... .......+||+.|+|||++.+ ..
T Consensus 180 ~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~--------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~ 245 (412)
T 2vd5_A 180 RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG--------------TVRSLVAVGTPDYLSPEILQAVGGGPGTG 245 (412)
T ss_dssp HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--------------CEECSSCCSCGGGCCHHHHHHHHTCTTCS
T ss_pred HCCeeecccCHHHeeecCCCCEEEeechhheeccCCC--------------ccccceeccccCcCCHHHHhhcccCcCCC
Confidence 9999999999999999999999999999998653211 111234689999999999872 24
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCCC---CCHHH
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDR---PSATE 656 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R---Pta~e 656 (1170)
.|+.++|||||||++|||++ ||......+....+... ...+|......++++++||++||+ +|.+| |++++
T Consensus 246 ~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~e 324 (412)
T 2vd5_A 246 SYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGD 324 (412)
T ss_dssp EECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHH
T ss_pred CCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHH
Confidence 58999999999999999996 88877666655555432 234454445678899999999999 99998 69999
Q ss_pred HHhccCCCCchHHHH
Q 001059 657 LLQDALPPQMEYELL 671 (1170)
Q Consensus 657 iL~~~~~~~~~~~~~ 671 (1170)
+++||||....|+.+
T Consensus 325 i~~Hpff~~i~w~~l 339 (412)
T 2vd5_A 325 FRTHPFFFGLDWDGL 339 (412)
T ss_dssp HHTSGGGTTCCSTTS
T ss_pred HhcCCCcCCCCHHHH
Confidence 999999999887654
No 80
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5.7e-41 Score=394.29 Aligned_cols=267 Identities=20% Similarity=0.288 Sum_probs=211.9
Q ss_pred cCCceEEeeeccC--CcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 354 LNDFEELQPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 354 ~~~y~~~~~LG~G--~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.++|++++.||+| +||+||+|+++.+|+.||||+++...........+.+|+.+|+.++|||||+++++|.+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 97 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA------ 97 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE------
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE------
Confidence 4689999999999 99999999999999999999998776666667788999999999999999999999843
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 98 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~ 143 (389)
T 3gni_B 98 ----------------------------------DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 143 (389)
T ss_dssp ----------------------------------TTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 356899999997 5999998765 679999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~ 587 (1170)
||++||+||||||+|||++.++.+||+|||++............ ........+||+.|+|||++.+. ..++
T Consensus 144 LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 215 (389)
T 3gni_B 144 IHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV--------VHDFPKYSVKVLPWLSPEVLQQNLQGYD 215 (389)
T ss_dssp HHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSC--------BCCCCTTCTTTGGGSCHHHHSTTSSCBC
T ss_pred HHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccc--------cccccccccccccccCHHHHhccCCCCC
Confidence 99999999999999999999999999999998765322111000 00112345899999999999873 4589
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC----------------------------------------
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE---------------------------------------- 624 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~---------------------------------------- 624 (1170)
.++|||||||++|||++ ||............+.....
T Consensus 216 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (389)
T 3gni_B 216 AKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNG 295 (389)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------------------------------------
T ss_pred cHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccC
Confidence 99999999999999997 77654333222222111000
Q ss_pred ---CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 625 ---LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 625 ---~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
..+.+...++++.+||++||+.||.+|||+.++|+||||.+...
T Consensus 296 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~ 342 (389)
T 3gni_B 296 DSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR 342 (389)
T ss_dssp ----------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred CCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence 00123345678999999999999999999999999999987653
No 81
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4e-41 Score=390.63 Aligned_cols=258 Identities=25% Similarity=0.446 Sum_probs=210.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC---CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~---~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.+.++|++.+.||+|+||+||+|+++.+|+.||||+++... ......+.+.+|+.+++.++||||++++++|.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--- 97 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS--- 97 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE---
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe---
Confidence 44578999999999999999999999999999999996432 111235678999999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIV 503 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~ 503 (1170)
...+|+|||||+ ++|.+.+... ..+++..++.++.||+
T Consensus 98 -------------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 140 (351)
T 3c0i_A 98 -------------------------------------DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140 (351)
T ss_dssp -------------------------------------TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHH
Confidence 357899999997 5898777543 2489999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCC---EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 580 (1170)
.||+|||++||+||||||+|||++.++. +||+|||+++...... ......+||+.|+|||++
T Consensus 141 ~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~ 205 (351)
T 3c0i_A 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---------------LVAGGRVGTPHFMAPEVV 205 (351)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTS---------------CBCCCCCSCGGGCCHHHH
T ss_pred HHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCC---------------eeecCCcCCcCccCHHHH
Confidence 9999999999999999999999987654 9999999998653211 112345899999999999
Q ss_pred cCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 581 QGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 581 ~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
.+ ..++.++|||||||++|+|++ ||..... .....+.......+ ..+...++++.+||++||+.||.+|||+.+
T Consensus 206 ~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e 283 (351)
T 3c0i_A 206 KR-EPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYE 283 (351)
T ss_dssp TT-CCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred cC-CCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence 87 568999999999999999997 7766433 33333333333333 345677889999999999999999999999
Q ss_pred HHhccCCCCc
Q 001059 657 LLQDALPPQM 666 (1170)
Q Consensus 657 iL~~~~~~~~ 666 (1170)
+|+|||+...
T Consensus 284 ~l~hp~~~~~ 293 (351)
T 3c0i_A 284 ALNHPWLKER 293 (351)
T ss_dssp HHTSHHHHTH
T ss_pred HhcChhhcCC
Confidence 9999998654
No 82
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.1e-40 Score=371.44 Aligned_cols=256 Identities=24% Similarity=0.374 Sum_probs=215.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
..|++.+.||+|+||+||+|.+..++..||+|++..........+.+.+|+.+|+.++||||++++++|....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------- 98 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV------- 98 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-------
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-------
Confidence 4588999999999999999999999999999999876666666778999999999999999999999885421
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
.....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++|
T Consensus 99 -----------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 149 (290)
T 1t4h_A 99 -----------------------------KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT 149 (290)
T ss_dssp -----------------------------SSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred -----------------------------CCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 13467899999996 599999998888999999999999999999999999
Q ss_pred --ccccCCCCCceeec-CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 514 --IIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 514 --IiHrDLKp~NILi~-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
|+||||||+|||++ .++.+||+|||++...... ......||+.|+|||++.+ .++.++
T Consensus 150 ~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~t~~y~aPE~~~~--~~~~~~ 210 (290)
T 1t4h_A 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-----------------FAKAVIGTPEFMAPEMYEE--KYDESV 210 (290)
T ss_dssp SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT-----------------SBEESCSSCCCCCGGGGGT--CCCTHH
T ss_pred CCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc-----------------ccccccCCcCcCCHHHHhc--cCCCcc
Confidence 99999999999998 7899999999999753211 1134579999999999886 489999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
|||||||++|+|++ ||...................+......++++.+||.+||+.||.+|||+.++++||||..
T Consensus 211 Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 211 DVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred hHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 99999999999997 8876555444444444333333334455689999999999999999999999999999975
No 83
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.1e-40 Score=373.90 Aligned_cols=259 Identities=27% Similarity=0.454 Sum_probs=211.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++.+.||+|+||.||+|+++.+|+.||||+++...........+.+|+.++++++||||+++++++..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 73 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-------- 73 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE--------
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec--------
Confidence 578999999999999999999999999999999987654443445678899999999999999999998743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||+
T Consensus 74 --------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 121 (299)
T 2r3i_A 74 --------------------------------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121 (299)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999998765 468999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+...++.++|
T Consensus 122 ~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 186 (299)
T 2r3i_A 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGAKYYSTAVD 186 (299)
T ss_dssp TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS---------------BCTTSCBCCCTTCCHHHHTTCSSCCTHHH
T ss_pred CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc---------------cccCcccccccccCcHHhhccccCChHHH
Confidence 999999999999999999999999999998753221 01234578999999999987555899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC--------------------------ccccCCHHHHHHHHH
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP--------------------------SWVAKFSEQESLLRR 642 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~--------------------------~~~~~~~e~~~LI~~ 642 (1170)
||||||++|+|++ ||......+....+....+..+. .....++++.+||++
T Consensus 187 i~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 266 (299)
T 2r3i_A 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQ 266 (299)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHH
Confidence 9999999999997 88776655554444332221110 012356789999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||+.++++||||....
T Consensus 267 ~L~~dP~~Rpt~~~~l~hp~~~~~~ 291 (299)
T 2r3i_A 267 MLHYDPNKRISAKAALAHPFFQDVT 291 (299)
T ss_dssp HTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred hcCcCcccCCCHHHHhcChhhhcCC
Confidence 9999999999999999999998654
No 84
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.5e-40 Score=404.56 Aligned_cols=259 Identities=27% Similarity=0.508 Sum_probs=215.9
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-----------hhHHHHHHHHHHHHhccCCCcee
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-----------PVNDRILREVATLSRLQHQHVVR 418 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-----------~~~~~~~~Ev~iL~~l~HpnIV~ 418 (1170)
.+...++|+++++||+|+||+||+|+++.+++.||||+++...... ...+.+.+|+.+|+.++||||++
T Consensus 31 ~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 110 (504)
T 3q5i_A 31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIK 110 (504)
T ss_dssp CSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCC
T ss_pred CCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCe
Confidence 3455689999999999999999999999999999999997543221 23567899999999999999999
Q ss_pred EEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHH
Q 001059 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWH 497 (1170)
Q Consensus 419 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~ 497 (1170)
++++|.+ ...+|+|||||+ ++|.+.+.....+++..++.
T Consensus 111 ~~~~~~~----------------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~ 150 (504)
T 3q5i_A 111 LFDVFED----------------------------------------KKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150 (504)
T ss_dssp EEEEEEC----------------------------------------SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHH
T ss_pred EEEEEEc----------------------------------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHH
Confidence 9998832 457899999996 59999998888999999999
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCceeecCCC---CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccC
Q 001059 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 574 (1170)
Q Consensus 498 i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 574 (1170)
++.||+.||+|||++||+||||||+|||++.++ .+||+|||+|+...... .....+||+.|
T Consensus 151 i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y 214 (504)
T 3q5i_A 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY----------------KLRDRLGTAYY 214 (504)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS----------------CBCCCCSCTTT
T ss_pred HHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC----------------ccccccCCcCC
Confidence 999999999999999999999999999998775 69999999998653211 12345799999
Q ss_pred CCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCC
Q 001059 575 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 575 ~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
+|||++.+ .|+.++|||||||++|+|++ ||......+....+.......+ +.+...++++++||++||+.||.+
T Consensus 215 ~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~ 292 (504)
T 3q5i_A 215 IAPEVLKK--KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNK 292 (504)
T ss_dssp CCHHHHTT--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred CCHHHhcc--CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhH
Confidence 99999875 58999999999999999997 8887776666655554443333 355678899999999999999999
Q ss_pred CCCHHHHHhccCCCCc
Q 001059 651 RPSATELLQDALPPQM 666 (1170)
Q Consensus 651 RPta~eiL~~~~~~~~ 666 (1170)
|||+.++|+|||+...
T Consensus 293 R~t~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 293 RCTAEEALNSRWIKKY 308 (504)
T ss_dssp SCCHHHHHTSHHHHHT
T ss_pred CCCHHHHhcCHhhhhc
Confidence 9999999999997543
No 85
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.2e-41 Score=386.69 Aligned_cols=258 Identities=25% Similarity=0.395 Sum_probs=205.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++++.||+|+||+||+|+++.+|+.||||+++..... .....+.+|+.+|+.++||||+++++++..
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 71 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHT-------- 71 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEEC--------
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcCCCCCCeeeeEEee--------
Confidence 46899999999999999999999999999999999754321 112245679999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+++|.+++.... .+++..++.++.||+.||+|||++
T Consensus 72 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 119 (324)
T 3mtl_A 72 --------------------------------EKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119 (324)
T ss_dssp --------------------------------SSCEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCEEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 35679999999999999887654 599999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++||
T Consensus 120 ~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 184 (324)
T 3mtl_A 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT---------------KTYDNEVVTLWYRPPDILLGSTDYSTQIDM 184 (324)
T ss_dssp TEEESSCCGGGEEECTTCCEEECSSSEEECC---------------------------CGGGCCHHHHTTCCCCCTHHHH
T ss_pred CccCCCcCHHHEEECCCCCEEEccCcccccccCCc---------------cccccccCcccccChhhhcCCCCCCcHHHH
Confidence 99999999999999999999999999997543211 112345789999999999876678999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC---------------------------ccccCCHHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP---------------------------SWVAKFSEQESLLRR 642 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~---------------------------~~~~~~~e~~~LI~~ 642 (1170)
|||||++|+|++ ||......+....+....+..++ .....++++.+||++
T Consensus 185 wslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 264 (324)
T 3mtl_A 185 WGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTK 264 (324)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHH
Confidence 999999999997 88766655544443332221111 112356788999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||+.++|+||||....
T Consensus 265 ~L~~dP~~R~t~~e~l~hp~f~~~~ 289 (324)
T 3mtl_A 265 LLQFEGRNRISAEDAMKHPFFLSLG 289 (324)
T ss_dssp HSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred HcCcCcccCCCHHHHhcChhhhhcc
Confidence 9999999999999999999998764
No 86
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=385.01 Aligned_cols=255 Identities=27% Similarity=0.400 Sum_probs=199.8
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...++|++.+.||+|+||+||+|+++.+++.||||+++... ..+.+.+|+.+|++++||||++++++|..
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 119 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFET------ 119 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEEC------
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEec------
Confidence 34577999999999999999999999999999999997432 23567899999999999999999998832
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||
T Consensus 120 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH 165 (349)
T 2w4o_A 120 ----------------------------------PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165 (349)
T ss_dssp ----------------------------------SSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999996 599999988888999999999999999999999
Q ss_pred hCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 511 GQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
++||+||||||+|||++. ++.+||+|||+++...... .....+||+.|+|||++.+ ..++
T Consensus 166 ~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~ 228 (349)
T 2w4o_A 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV----------------LMKTVCGTPGYCAPEILRG-CAYG 228 (349)
T ss_dssp HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------------------------------CGGGSCHHHHTT-CCCC
T ss_pred HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc----------------ccccccCCCCccCHHHhcC-CCCC
Confidence 999999999999999975 7899999999998653211 1234579999999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHH-hhhcCCC-CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSD-LKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~-l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
.++|||||||++|||++ ||......+..... ....... ++.+...++++.+||++||+.||.+|||+.++|+|||
T Consensus 229 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 308 (349)
T 2w4o_A 229 PEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308 (349)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred cccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 99999999999999997 77665554433333 3322222 2345667889999999999999999999999999999
Q ss_pred CCCch
Q 001059 663 PPQME 667 (1170)
Q Consensus 663 ~~~~~ 667 (1170)
+.+..
T Consensus 309 ~~~~~ 313 (349)
T 2w4o_A 309 VTGKA 313 (349)
T ss_dssp TTSTT
T ss_pred cCCCc
Confidence 98654
No 87
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.8e-40 Score=378.06 Aligned_cols=262 Identities=24% Similarity=0.366 Sum_probs=219.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----hhHHHHHHHHHHHHhccCCCceeEEEEEeec
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFET 426 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~ 426 (1170)
....++|++.+.||+|+||.||+|+++.+|+.||||+++...... ...+.+.+|+.+++.++||||++++++|.+
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 86 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN- 86 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-
Confidence 345578999999999999999999999999999999997654321 135678999999999999999999998732
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 87 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~a 127 (321)
T 2a2a_A 87 ---------------------------------------RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127 (321)
T ss_dssp ---------------------------------------SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 456899999996 5999999988889999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCC----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
|+|||++||+||||||+|||++.++ .+||+|||+++...... ......||+.|+|||++.
T Consensus 128 L~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 191 (321)
T 2a2a_A 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----------------EFKNIFGTPEFVAPEIVN 191 (321)
T ss_dssp HHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC----------------CCCCCCSCGGGCCHHHHT
T ss_pred HHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccc----------------cccccCCCCCccCccccc
Confidence 9999999999999999999999887 79999999998653211 123457999999999998
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
+ ..++.++|||||||++|+|++ ||......+............++ .+...++.+.+||++||+.||.+|||+.++
T Consensus 192 ~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~ 270 (321)
T 2a2a_A 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270 (321)
T ss_dssp T-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHH
T ss_pred C-CCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 7 568999999999999999997 88766655555444443333333 235667889999999999999999999999
Q ss_pred HhccCCCCchHH
Q 001059 658 LQDALPPQMEYE 669 (1170)
Q Consensus 658 L~~~~~~~~~~~ 669 (1170)
++|||+......
T Consensus 271 l~hp~~~~~~~~ 282 (321)
T 2a2a_A 271 LRHPWITPVDNQ 282 (321)
T ss_dssp HHSTTTSCSSHH
T ss_pred hcCccccCCCcc
Confidence 999999987644
No 88
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.1e-40 Score=370.38 Aligned_cols=255 Identities=31% Similarity=0.466 Sum_probs=208.2
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
.+++.++|++.+.||+|+||+||+|.++.+|+.||||+++...........+.+|+..+..+ +||||++++++|.+
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~--- 82 (289)
T 1x8b_A 6 KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE--- 82 (289)
T ss_dssp CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE---
T ss_pred cccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec---
Confidence 35667899999999999999999999999999999999987655555667899999999999 99999999998843
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc----CCCCHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY----DHFDKELAWHLFRQIV 503 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~----~~l~e~~~~~i~~qI~ 503 (1170)
...+|+|||||++ +|.+++... ..+++..++.++.||+
T Consensus 83 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 125 (289)
T 1x8b_A 83 -------------------------------------DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125 (289)
T ss_dssp -------------------------------------TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHH
Confidence 3578999999965 999998764 6699999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCC-------------------CCEEEeecCcchhccccccccCCCCCCCCCCcccc
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDAR-------------------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 564 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~-------------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 564 (1170)
.||+|||++||+||||||+|||++.+ ..+||+|||++......
T Consensus 126 ~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------------------ 187 (289)
T 1x8b_A 126 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP------------------ 187 (289)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS------------------
T ss_pred HHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc------------------
Confidence 99999999999999999999999844 47999999999864311
Q ss_pred CcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc--CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHH
Q 001059 565 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 642 (1170)
Q Consensus 565 ~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt--Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~ 642 (1170)
....||+.|+|||++.+...++.++|||||||++|+|++ |+...... ..... ....+......++++.+||.+
T Consensus 188 -~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~li~~ 262 (289)
T 1x8b_A 188 -QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ--WHEIR--QGRLPRIPQVLSQEFTELLKV 262 (289)
T ss_dssp -CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH--HHHHH--TTCCCCCSSCCCHHHHHHHHH
T ss_pred -cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH--HHHHH--cCCCCCCCcccCHHHHHHHHH
Confidence 234699999999999875567789999999999999997 33222211 11111 233444445667899999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||+.++++|||+....
T Consensus 263 ~l~~dp~~Rps~~~ll~h~~~~~~~ 287 (289)
T 1x8b_A 263 MIHPDPERRPSAMALVKHSVLLSAS 287 (289)
T ss_dssp HTCSSGGGSCCHHHHHTCTTC----
T ss_pred HhCCCcccCCCHHHHhhChHhhhhc
Confidence 9999999999999999999998653
No 89
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A*
Probab=100.00 E-value=6.1e-41 Score=413.17 Aligned_cols=411 Identities=13% Similarity=0.066 Sum_probs=283.8
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
.+.|++||+|.++.+++.|++.+++.|.++||++|.||+| ++. ++.+.+.++||+|.|++|+.++|||+.|+++
T Consensus 35 ~~~G~~~~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~~m~~~~d~~~~~~~LrP~~~~~~ 114 (572)
T 2j3l_A 35 VAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETF 114 (572)
T ss_dssp EETTEEEECHHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEETHHHHHHSHHHHSCTTSCEEECTTCCEEEECSCCHHHH
T ss_pred cCCCeeeeCCHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHHhcCCccccchheEEEecCCCCeEEEccccHHHH
Confidence 5799999999999999999999999999999999999999 222 2235678999999999999999999999999
Q ss_pred HHHHHhC----CCCceeEEEecCeEEcCCC-CC---CCCceeEeEEEEeCCCCcccHHHH---HHHHHHHHHHcCCCcce
Q 001059 788 IRWAISN----QKSSFKRYEISSVYRRAIG-HS---PPNRYLQGDFDIIGGASALTEAEV---LKVTMDIVTRFFHAESC 856 (1170)
Q Consensus 788 aR~~~~~----~~~P~r~~Y~g~VfR~e~~-~~---~~~ef~Q~GvEiiG~~~~~aDaEv---i~la~~~l~~lgi~~~~ 856 (1170)
+|+++.+ +..|+|+||+|+|||+|++ +. |.|||+|+|+|+||.+...+|+|+ +.++.++|+.||+. +
T Consensus 115 ~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~Gl~R~ReF~q~d~~~f~~~~~~~~~e~~~~~~~~~~~~~~lgl~--~ 192 (572)
T 2j3l_A 115 TELIRDEINSYKRLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE--F 192 (572)
T ss_dssp HHHHHHHCCBGGGCCEEEEEEEEEECCCSSCCTGGGSCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCC--E
T ss_pred HHHHHhhccChhhcCHhhheecCeeccCcCcccCccccceeEEeeeEEEcCCHHHHHHHHHHHHHHHHHHHHHcCCc--E
Confidence 9988874 2469999999999999987 34 567799999999999888899986 45899999999995 9
Q ss_pred EEEeCcHHHHHHHHH------------------HhCCCHH-----------------------------HHHHHHHHHHH
Q 001059 857 DIHLNHGDLLEAIWS------------------WAGIKAE-----------------------------HREKVAELLAM 889 (1170)
Q Consensus 857 ~i~lg~~~il~~~l~------------------~lgl~~~-----------------------------~~~~l~~~l~~ 889 (1170)
.+.+++++.+.+.+. .++.... ....+...+.
T Consensus 193 ~~~~~~~g~~g~~~s~E~~~~~~~ge~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~l~~~lg- 271 (572)
T 2j3l_A 193 RAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFE- 271 (572)
T ss_dssp EEEECCGGGGTCSSEEEEEEECTTCSEEEEEESSSSCEEETTTCCCCCCCCCCCCCCCCCEEEECTTCCSHHHHHHHHT-
T ss_pred EEEecccccCCCcccEEEEEEcCCCcceEEEeCCCCcccchhhhhcccccccccccccccceecCCCCCcHHHHHHHhC-
Confidence 999999877654321 1111000 0111111111
Q ss_pred hcCCCCCcccccc----hHHHHHHHHH-HHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHH----
Q 001059 890 MGSLRPQSSEWKS----KWVVIRRQLL-QELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL---- 960 (1170)
Q Consensus 890 ~d~~~~~~~~~~~----~~~~~~~~~~-~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L---- 960 (1170)
+...... |. ..+....-++ ....+.. ..+...+. .. .+-... .+.+.++
T Consensus 272 ---~~~~~i~-K~l~~~~~~~~~~vli~gd~el~~---~kl~~~l~---~~---------~l~~a~---~~el~~~~g~~ 329 (572)
T 2j3l_A 272 ---VEPQRII-KSVLFIADEEPVMVLVRGDHDVND---VKLKNFLG---AD---------FLDEAT---EEDARRVLGAG 329 (572)
T ss_dssp ---CCGGGBE-EEEEEEETTEEEEEEEETTCCBCH---HHHHHHHT---CS---------CEEECC---HHHHHHHHSSC
T ss_pred ---cCHHHeE-EEEEEEeCCcEEEEEeeCccccCH---HHHHHhhC---CC---------ccccCC---HHHHHHhhCCC
Confidence 0000000 00 0000000000 0000111 11111110 00 000000 0111111
Q ss_pred --HHHHccC--cceEEEccCCCC--------------------CCCcccceEEEEEeccCCCcccccccceeccccccc-
Q 001059 961 --YLRIWRI--EKNIYIDALMPP--------------------IESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD- 1015 (1170)
Q Consensus 961 --~l~~~g~--~~~i~~Dl~lvr--------------------gldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD- 1015 (1170)
++..+|+ .-.+.+|.+++| |++||++++|++.....+ ...++|+ ||||
T Consensus 330 ~g~~~p~gl~~~i~~~iD~sl~r~~~~~~ga~~~~~~~~~~~~grd~~~~~~~el~~~~~G------~~~~~~g-g~~~~ 402 (572)
T 2j3l_A 330 FGSIGPVNVSEDVKIYADLAVQDLANAIVGANEDGYHLTNVNPDRDFQPISYEDLRFVQEG------DPSPDGN-GVLAF 402 (572)
T ss_dssp TTSCCSTTCCTTCEEEEETTTTTCCSEEEECSSTTEEEEEECBTTTBCCSEEECCBCCCTT------CBCTTSS-SBEEE
T ss_pred ccccCCccCCCCCcEEEehhhhcCCceEEccCCCCceeeccccccCcCcCcHHHHHHHhcC------CcccccC-Cccee
Confidence 1112222 236899999999 789999999998754322 2345664 8887
Q ss_pred ----------hhh----hhcccccccccCCCCCCCCce-EEeccHHHHHhhccC------CCCCCCCCCCceEEEEEcCC
Q 001059 1016 ----------YLL----HRMWDREYVGYASRTNPPSGV-GASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRGG 1074 (1170)
Q Consensus 1016 ----------~L~----~~fg~~~~~~~~g~~~~~pAv-GfaiglerL~~~L~~------~~~~~~~~~~~~vlv~~~~~ 1074 (1170)
+|- ++|+.. ....+++..+|++ ||+||+|||+.+|.+ +...+...+|.+|+|++.+.
T Consensus 403 ~~~ievg~~f~Lg~~ys~~~~~~--~~~~~g~~~~p~~g~~giGveRli~~l~e~~~d~~g~~~p~~~ap~~v~vi~~~~ 480 (572)
T 2j3l_A 403 TKGIEIGHIFKLGTRYSDAMGAT--VLDENGREKSVIMGCYGIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNV 480 (572)
T ss_dssp EEEEEEEEEEEEETHHHHHHTCE--EECTTSCEEECEEEEEEEEHHHHHHHHHHHHEETTEECCCTTTSSCSEEEEESCT
T ss_pred ccceEEEEEeccCcccccccCCE--EECCCCcEEeeeeeccccCHHHHHHHHHHhcCcccCcccCCCcCCeEEEEEecCC
Confidence 332 344321 0111233346888 899999999988642 12233334678999999841
Q ss_pred --CccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHH
Q 001059 1075 --GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLV 1152 (1170)
Q Consensus 1075 --~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~ 1152 (1170)
+....+|.++++.||+.|++|++++. ++++++++++|++.|+|++|+||++| ++|+|+||+|.+++|..+++++++
T Consensus 481 ~~~~~~~~a~~l~~~Lr~~gi~v~~d~~-~~~~g~k~~~a~~~g~p~~iivG~~e-~~~~v~vk~~~~~~q~~v~~~~l~ 558 (572)
T 2j3l_A 481 KDEYQTKLSQEVEAMMTEAGYEVLVDDR-NERAGVKFADADLIGCPIRITVGKKA-VDGVVEVKIKRTGEMLEVRKEELE 558 (572)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCEEEECS-SCCHHHHHHHHHHHCCSEEEEECGGG-GGTEEEEEETTTCCEEEEEHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCeEEEeCC-CCCHhHHHHHHHhcCCCEEEEEcccc-cCCeEEEEEcCCCcEEEEeHHHHH
Confidence 34678999999999999999998876 67999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHh
Q 001059 1153 RFLLDAIAS 1161 (1170)
Q Consensus 1153 ~~l~~~l~~ 1161 (1170)
+.++ .++.
T Consensus 559 ~~l~-~~~~ 566 (572)
T 2j3l_A 559 STLS-ILMN 566 (572)
T ss_dssp HHHH-HHCC
T ss_pred HHHH-HHhc
Confidence 9998 7653
No 90
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-40 Score=388.75 Aligned_cols=259 Identities=22% Similarity=0.372 Sum_probs=216.5
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+...++|++++.||+|+||+||+|.++.+|+.||+|++.... ......+.+|+.+|+.++||||++++++|.+
T Consensus 46 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~---- 119 (387)
T 1kob_A 46 QGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFED---- 119 (387)
T ss_dssp CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC----
T ss_pred CCccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe----
Confidence 3455689999999999999999999999999999999997432 2344578999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+
T Consensus 120 ------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~ 163 (387)
T 1kob_A 120 ------------------------------------KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLK 163 (387)
T ss_dssp ------------------------------------SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence 456899999996 59999887654 6999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecC--CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|||++||+||||||+|||++. ++.+||+|||+++...... .....+||+.|+|||++.+ ..
T Consensus 164 ~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~ 226 (387)
T 1kob_A 164 HMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----------------IVKVTTATAEFAAPEIVDR-EP 226 (387)
T ss_dssp HHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS----------------CEEEECSSGGGCCHHHHTT-CC
T ss_pred HHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc----------------ceeeeccCCCccCchhccC-CC
Confidence 999999999999999999974 4779999999998653211 1123479999999999987 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
++.++|||||||++|||++ ||......+....+.......+ ..+...++++.+||++||+.||.+|||+.++|+|+
T Consensus 227 ~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 227 VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred CCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence 8999999999999999997 8877666555554444333333 34556788999999999999999999999999999
Q ss_pred CCCCch
Q 001059 662 LPPQME 667 (1170)
Q Consensus 662 ~~~~~~ 667 (1170)
|+....
T Consensus 307 ~~~~~~ 312 (387)
T 1kob_A 307 WLKGDH 312 (387)
T ss_dssp TTSSCC
T ss_pred cccCCc
Confidence 998653
No 91
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2e-40 Score=385.00 Aligned_cols=252 Identities=25% Similarity=0.352 Sum_probs=207.7
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-----CCCceeEEEEEee
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----HQHVVRYYQAWFE 425 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-----HpnIV~l~~~~~e 425 (1170)
....++|+++++||+|+||+||+|++..+|+.||||+++. .......+.+|+.+++.+. ||||++++++|..
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~ 107 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY 107 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence 3446899999999999999999999999999999999863 3344567788999999996 9999999998843
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIV 503 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI~ 503 (1170)
...+|+|||||+++|.+++.... .+++..++.++.||+
T Consensus 108 ----------------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~ 147 (360)
T 3llt_A 108 ----------------------------------------YDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEIL 147 (360)
T ss_dssp ----------------------------------------TTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred ----------------------------------------CCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence 35789999999889999997654 599999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecC-------------------------CCCEEEeecCcchhccccccccCCCCCCCC
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDA-------------------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDT 558 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~-------------------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~ 558 (1170)
.||+|||++||+||||||+|||++. ++.+||+|||+|+.....
T Consensus 148 ~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~------------ 215 (360)
T 3llt_A 148 KALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY------------ 215 (360)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC------------
T ss_pred HHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC------------
Confidence 9999999999999999999999975 789999999999753211
Q ss_pred CCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc------
Q 001059 559 GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW------ 629 (1170)
Q Consensus 559 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~------ 629 (1170)
....+||+.|+|||++.+ ..++.++|||||||++|+|++ ||......+............|...
T Consensus 216 ------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 288 (360)
T 3llt_A 216 ------HGSIINTRQYRAPEVILN-LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATK 288 (360)
T ss_dssp ------CCSCCSCGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTT
T ss_pred ------CcCccCcccccCcHHHcC-CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhh
Confidence 134579999999999988 569999999999999999997 8876655544433333222222110
Q ss_pred -------------------------------------ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 630 -------------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 630 -------------------------------------~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
....+.+.+||++||+.||.+|||+.++|+||||+
T Consensus 289 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 289 TNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp SGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred ccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 11225677999999999999999999999999985
No 92
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.3e-40 Score=387.01 Aligned_cols=261 Identities=28% Similarity=0.384 Sum_probs=205.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++++.||+|+||.||+|++..+|+.||||++............+.+|+.+++.++||||++++++|....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 97 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK----- 97 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCC-----
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccc-----
Confidence 468999999999999999999999999999999999865555556678899999999999999999999884321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|+|||||+++|.+.+. ..+++..++.++.||+.||+|||++
T Consensus 98 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~ 146 (371)
T 2xrw_A 98 -----------------------------SLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA 146 (371)
T ss_dssp -----------------------------STTTCCEEEEEEECCSEEHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------ccccccceEEEEEcCCCCHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHC
Confidence 011245789999999999998885 4599999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ..+..+||+.|+|||++.+ ..++.++||
T Consensus 147 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 209 (371)
T 2xrw_A 147 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------MMTPYVVTRYYRAPEVILG-MGYKENVDI 209 (371)
T ss_dssp TCCCSCCCGGGEEECTTSCEEECCCCC--------------------------------CTTCCHHHHTT-CCCCTTHHH
T ss_pred CeecccCCHHHEEEcCCCCEEEEEeeccccccccc----------------ccCCceecCCccCHHHhcC-CCCCchHhH
Confidence 99999999999999999999999999998643211 1234589999999999988 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc---------------------------------------c
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW---------------------------------------V 630 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~---------------------------------------~ 630 (1170)
|||||++|+|++ ||...........+....+..++.+ .
T Consensus 210 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (371)
T 2xrw_A 210 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 289 (371)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccc
Confidence 999999999997 8876665554444433222111000 0
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 631 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 631 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
..++++.+||++||+.||.+|||++++|+||||...
T Consensus 290 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 325 (371)
T 2xrw_A 290 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 325 (371)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred cccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence 113578999999999999999999999999998654
No 93
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.7e-40 Score=369.77 Aligned_cols=288 Identities=43% Similarity=0.685 Sum_probs=214.7
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++.++|++.+.||+|+||.||+|++..+|+.||||+++. .......+.+|+.+++.++||||++++++|.+....
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~- 77 (303)
T 1zy4_A 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNF- 77 (303)
T ss_dssp BHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCC-
T ss_pred CcccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcch-
Confidence 3566889999999999999999999999999999999964 233456789999999999999999999998653100
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...........+|+|||||+ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 78 --------------------------~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~ 131 (303)
T 1zy4_A 78 --------------------------VKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131 (303)
T ss_dssp --------------------------CC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------hhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHH
Confidence 000011123568899999996 59999997543 58889999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++............ ...............||+.|+|||++.+...++.
T Consensus 132 LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 210 (303)
T 1zy4_A 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD-SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210 (303)
T ss_dssp HHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC--------------------------CTTSCHHHHTSCSCCCT
T ss_pred HHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccc-cccccccccccccCCCcccccCcccccCCCCCcc
Confidence 999999999999999999999999999999998654221000000 0000000112345679999999999987557899
Q ss_pred cchhHHHHHHHHHhhcCCCchhHHHHHHHHhhh-cCCCCCcc-ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 589 KADMYSLGIVFFELWHPFSTAMERQIVLSDLKQ-KGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 589 ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~-~~~~p~~~-~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
++|||||||++|+|++||............+.. ...+|+.+ ...++.+.++|++||+.||.+|||+.++++|||+...
T Consensus 211 ~~Di~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 211 KIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred hhhHHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 999999999999999999866554444433332 23344433 3456788999999999999999999999999999876
Q ss_pred hHH
Q 001059 667 EYE 669 (1170)
Q Consensus 667 ~~~ 669 (1170)
..+
T Consensus 291 ~~~ 293 (303)
T 1zy4_A 291 HQD 293 (303)
T ss_dssp CHH
T ss_pred ChH
Confidence 543
No 94
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1e-40 Score=389.68 Aligned_cols=262 Identities=27% Similarity=0.415 Sum_probs=198.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++++.||+|+||.||+|.+..+|+.||||++............+.+|+.+|+.++||||++++++|....
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~----- 101 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR----- 101 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS-----
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC-----
Confidence 347899999999999999999999999999999999765555556678999999999999999999999874321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|++|||++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 102 -----------------------------~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~ 151 (367)
T 2fst_X 102 -----------------------------SLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSA 151 (367)
T ss_dssp -----------------------------SGGGCCCCEEEEECCCEECC------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------ccccCCeEEEEecccCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0012345799999999899988865 5799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++..... .+..+||+.|+|||++.+...++.++||
T Consensus 152 givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di 213 (367)
T 2fst_X 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE------------------MTGYVATRWYRAPEIMLNWMHYNQTVDI 213 (367)
T ss_dssp TCCCCCCCGGGEEECTTCCEEECC---------------------------------CCCTTCCHHHHTTCCSCCTTHHH
T ss_pred CeeeCCCCHhhEEECCCCCEEEeecccccccccc------------------CCCcCcCcCccChHHHcCCcCCCchhhH
Confidence 9999999999999999999999999999864211 2346899999999999875678999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-----------------------C-----CccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-----------------------P-----PSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-----------------------p-----~~~~~~~~e~~~LI~ 641 (1170)
|||||++|||++ ||...........+....+.. + ..+...++++.+||.
T Consensus 214 wslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~ 293 (367)
T 2fst_X 214 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLE 293 (367)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHH
Confidence 999999999997 787655544433332211110 1 112345678999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||+.||.+|||+.++|+||||.+..
T Consensus 294 ~mL~~dP~~R~t~~e~L~hp~~~~~~ 319 (367)
T 2fst_X 294 KMLVLDSDKRITAAQALAHAYFAQYH 319 (367)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HhCCCCcccCcCHHHHhcChhhhhcc
Confidence 99999999999999999999998753
No 95
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-40 Score=383.68 Aligned_cols=259 Identities=25% Similarity=0.348 Sum_probs=204.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh---hhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL---PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~---~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..++|++.+.||+|+||.||+|+++.+|+.||||+++...... .....+.+|+.+++.++||||++++++|..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 83 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH---- 83 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC----
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee----
Confidence 4578999999999999999999999999999999987543221 123468899999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+++|.+.+... ..+++..++.++.||+.||+|
T Consensus 84 ------------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~ 127 (346)
T 1ua2_A 84 ------------------------------------KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEY 127 (346)
T ss_dssp ------------------------------------TTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHH
Confidence 3457999999999999888765 368999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++...... ...+..+||+.|+|||++.+...++.
T Consensus 128 lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~ 192 (346)
T 1ua2_A 128 LHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN---------------RAYTHQVVTRWYRAPELLFGARMYGV 192 (346)
T ss_dssp HHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC---------------CCCCCSCCCCTTCCHHHHTTCSCCCH
T ss_pred HHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc---------------ccCCcccccccccCchHhhCCCCCCc
Confidence 999999999999999999999999999999998653211 11234579999999999987556899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-------------------------ccccCCHHHHHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-------------------------SWVAKFSEQESLL 640 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-------------------------~~~~~~~e~~~LI 640 (1170)
++|||||||++|||++ ||......+....+....+..+. .+...++++.+||
T Consensus 193 ~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 272 (346)
T 1ua2_A 193 GVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLI 272 (346)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHH
T ss_pred hhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHH
Confidence 9999999999999997 66555554444444332211110 1134467899999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
++||+.||.+|||+.++|+|+||...
T Consensus 273 ~~~L~~dP~~Rpt~~ell~h~~f~~~ 298 (346)
T 1ua2_A 273 QGLFLFNPCARITATQALKMKYFSNR 298 (346)
T ss_dssp HHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred HHHhccChhhCCCHHHHhcChhhhcC
Confidence 99999999999999999999999765
No 96
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.5e-40 Score=381.91 Aligned_cols=260 Identities=25% Similarity=0.410 Sum_probs=211.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+++|++++.||+|+||.||+|++..+|+.||||++............+.+|+.+++.++||||++++++|.+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 95 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK------- 95 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-------
Confidence 3689999999999999999999999999999999997666655566778899999999999999999998743
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||++ +|.+++.....+++..++.++.||+.||+|||+
T Consensus 96 ---------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 142 (331)
T 4aaa_A 96 ---------------------------------KKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142 (331)
T ss_dssp ---------------------------------TTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999986 566666666789999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+...++.++|
T Consensus 143 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------~~~~~~~t~~y~aPE~~~~~~~~~~~~D 207 (331)
T 4aaa_A 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---------------VYDDEVATRWYRAPELLVGDVKYGKAVD 207 (331)
T ss_dssp TTCCCCCCCGGGEEECTTSCEEECCCTTC---------------------------CCCCCTTCCHHHHTTCTTCCTHHH
T ss_pred CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc---------------ccCCCcCCccccCcccccCCCCcchHHH
Confidence 9999999999999999999999999999986532210 1234579999999999987557899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC----------------------------ccccCCHHHHHHH
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP----------------------------SWVAKFSEQESLL 640 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~----------------------------~~~~~~~e~~~LI 640 (1170)
||||||++|+|++ ||......+.........+..++ .+...++.+.+||
T Consensus 208 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 287 (331)
T 4aaa_A 208 VWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLA 287 (331)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHH
Confidence 9999999999997 78766554444333222111110 1224577899999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.+||+.||.+|||+.++|+||||+...
T Consensus 288 ~~~L~~dP~~Rpt~~ell~hp~f~~~~ 314 (331)
T 4aaa_A 288 KKCLHIDPDKRPFCAELLHHDFFQMDG 314 (331)
T ss_dssp HHHTCSSGGGSCCGGGGGGSHHHHGGG
T ss_pred HHHhccCcccCCCHHHHhcCchhccCC
Confidence 999999999999999999999998764
No 97
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=382.29 Aligned_cols=259 Identities=25% Similarity=0.372 Sum_probs=205.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC--CCceeEEEEEeecCcccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H--pnIV~l~~~~~e~~~~~~ 431 (1170)
-+.|++++.||+|+||+||+|.+. +++.||||++............+.+|+.+|+.++| |||+++++++..
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~------ 80 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT------ 80 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC------
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee------
Confidence 357999999999999999999985 79999999998776666666789999999999977 999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||+++++|.+++.....+++.+++.++.||+.||+|||+
T Consensus 81 ----------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~ 126 (343)
T 3dbq_A 81 ----------------------------------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 126 (343)
T ss_dssp ----------------------------------SSEEEEEECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4578999998888999999998899999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC---------
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--------- 582 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--------- 582 (1170)
+||+||||||+|||++ ++.+||+|||+++....... .......+||+.|+|||++.+
T Consensus 127 ~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 192 (343)
T 3dbq_A 127 HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGK 192 (343)
T ss_dssp TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------------------------CCCCSSCCHHHHHHCC-------
T ss_pred CCeecCCCCcceEEEE-CCcEEEeecccccccCcccc-------------cccCCCCcCCcCcCCHHHHhhccccccccc
Confidence 9999999999999997 68899999999986532210 111235689999999999863
Q ss_pred -CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 583 -WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 583 -~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
...++.++|||||||++|||++ ||..........................++++.+||.+||+.||.+|||+.++|
T Consensus 193 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l 272 (343)
T 3dbq_A 193 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272 (343)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred cccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHH
Confidence 2458899999999999999997 776543332222222212222222233456899999999999999999999999
Q ss_pred hccCCCCch
Q 001059 659 QDALPPQME 667 (1170)
Q Consensus 659 ~~~~~~~~~ 667 (1170)
+|||+....
T Consensus 273 ~hp~~~~~~ 281 (343)
T 3dbq_A 273 AHPYVQIQT 281 (343)
T ss_dssp TSHHHHSCC
T ss_pred hCccccccC
Confidence 999986543
No 98
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.6e-40 Score=402.05 Aligned_cols=258 Identities=30% Similarity=0.550 Sum_probs=220.9
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..+.++|++.+.||+|+||+||+|+++.+|+.||||++...... ......+.+|+.+|++++||||++++++|.+
T Consensus 22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---- 97 (484)
T 3nyv_A 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED---- 97 (484)
T ss_dssp CCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred CcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe----
Confidence 44567899999999999999999999999999999999765432 3345779999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||. ++|.+.+.....+++..++.++.||+.||+|
T Consensus 98 ------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~ 141 (484)
T 3nyv_A 98 ------------------------------------KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141 (484)
T ss_dssp ------------------------------------SSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceee---cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi---~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
||++||+||||||+|||+ +.++.+||+|||+|+...... .....+||+.|+|||++.+ .
T Consensus 142 lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~--~ 203 (484)
T 3nyv_A 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK----------------KMKDKIGTAYYIAPEVLHG--T 203 (484)
T ss_dssp HHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC----------------SHHHHTTGGGTCCHHHHHT--C
T ss_pred HHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc----------------ccccCCCCccccCceeecC--C
Confidence 999999999999999999 467899999999998753221 1234579999999999987 5
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
|+.++|||||||++|+|++ ||......+....+.......+ +.+...++++++||++||+.||.+|||+.++|+||
T Consensus 204 ~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred CCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhCh
Confidence 8999999999999999997 8887777666665555444433 46678889999999999999999999999999999
Q ss_pred CCCCc
Q 001059 662 LPPQM 666 (1170)
Q Consensus 662 ~~~~~ 666 (1170)
|+...
T Consensus 284 ~~~~~ 288 (484)
T 3nyv_A 284 WIQTY 288 (484)
T ss_dssp HHHHH
T ss_pred hhccc
Confidence 88644
No 99
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.8e-40 Score=372.53 Aligned_cols=257 Identities=23% Similarity=0.361 Sum_probs=195.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||+||+|++..+|+.||||+++...........+.++...++.++||||+++++++.+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-------- 77 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-------- 77 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC--------
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec--------
Confidence 478999999999999999999999999999999997554443344445556666888899999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+++|.+++.. ...+++..++.++.||+.||+||
T Consensus 78 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 125 (290)
T 3fme_A 78 --------------------------------EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 125 (290)
T ss_dssp --------------------------------SSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------cCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999999988777653 46799999999999999999999
Q ss_pred HhC-CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc---CCCC
Q 001059 510 HGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ---GWPK 585 (1170)
Q Consensus 510 Hs~-gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~ 585 (1170)
|++ ||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++. ....
T Consensus 126 H~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~ 189 (290)
T 3fme_A 126 HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV----------------AKDIDAGCKPYMAPERINPELNQKG 189 (290)
T ss_dssp HHHSCCCCCCCSGGGCEECTTCCEEBCCC-------------------------------CCCCCCSCHHHHSCCTTC--
T ss_pred hhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc----------------cccccCCCccccChhhcChhhcCcC
Confidence 998 99999999999999999999999999998653221 112347999999999973 2256
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
++.++|||||||++|+|++ ||..........................++++.+||.+||+.||.+|||+.++++|||
T Consensus 190 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~ 269 (290)
T 3fme_A 190 YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269 (290)
T ss_dssp CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcc
Confidence 8999999999999999996 7765332222222222233222233456789999999999999999999999999999
Q ss_pred CCCc
Q 001059 663 PPQM 666 (1170)
Q Consensus 663 ~~~~ 666 (1170)
|...
T Consensus 270 f~~~ 273 (290)
T 3fme_A 270 FTLH 273 (290)
T ss_dssp HHHH
T ss_pred cccC
Confidence 8654
No 100
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=7.3e-40 Score=375.19 Aligned_cols=252 Identities=24% Similarity=0.422 Sum_probs=209.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.|+..+.||+|+||.||+|+++.+|+.||||++...... ..+.+.+|+.+++.++||||++++++|..
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---------- 113 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHFNVVEMYKSYLV---------- 113 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--SHHHHHHHHHHHTTCCCTTBCCEEEEEEE----------
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCcceEEEEEEE----------
Confidence 477888999999999999999999999999999754432 35678899999999999999999998843
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
...+|+||||++ ++|.+++.. ..+++..++.++.||+.||+|||++||
T Consensus 114 ------------------------------~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~i 162 (321)
T 2c30_A 114 ------------------------------GEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGV 162 (321)
T ss_dssp ------------------------------TTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ------------------------------CCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346899999996 588888764 569999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||||
T Consensus 163 vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s 226 (321)
T 2c30_A 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---------------PKRKSLVGTPYWMAPEVISR-SLYATEVDIWS 226 (321)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHHHHHH
T ss_pred ecCCCCHHHEEECCCCcEEEeeeeeeeecccCc---------------cccccccCCccccCHhhhcC-CCCCchhhHHH
Confidence 999999999999999999999999998653211 01234579999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||++|||++ ||......+...................++++.+||.+||+.||.+|||+.++++|||+.+.
T Consensus 227 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 301 (321)
T 2c30_A 227 LGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT 301 (321)
T ss_dssp HHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence 9999999997 77766555444333332222223345677899999999999999999999999999999765
No 101
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.7e-40 Score=368.34 Aligned_cols=261 Identities=28% Similarity=0.475 Sum_probs=216.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+.++|++.+.||+|+||.||+|.++.+|+.||||++...... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 76 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRRE------- 76 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT-THHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch-hhhHHHHHHHHHHHhcCCCCceeeeeEEEc-------
Confidence 467899999999999999999999999999999999754432 345678999999999999999999998733
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....|+||||+++ +|.+++.....+++..++.++.||+.||+|||+
T Consensus 77 ---------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~ 123 (276)
T 2yex_A 77 ---------------------------------GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123 (276)
T ss_dssp ---------------------------------TTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3567999999975 999998877789999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+||+++.++.+||+|||++......... .......||+.|+|||++.+...++.++|
T Consensus 124 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 190 (276)
T 2yex_A 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-------------RLLNKMCGTLPYVAPELLKRREFHAEPVD 190 (276)
T ss_dssp TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE-------------CCBCCCCSCGGGCCGGGGTCSSBCHHHHH
T ss_pred CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch-------------hcccCCccccCccChHHHhcCCCCCCcch
Confidence 99999999999999999999999999999865322100 11234579999999999987444578999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||||||++|+|++ ||....................+.+...++.+.+||.+||+.||.+|||+.++++|+||.+..
T Consensus 191 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (276)
T 2yex_A 191 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (276)
T ss_dssp HHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence 9999999999996 776544332222333333333344567788999999999999999999999999999998764
No 102
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.6e-40 Score=388.31 Aligned_cols=258 Identities=25% Similarity=0.378 Sum_probs=206.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc--CCCceeEEEEEeecCccccC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ--HQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~--HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+|++++.||+|+||+||+|.+. +|+.||||++............+.+|+.+|+.++ ||||+++++++..
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~------- 127 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT------- 127 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------
T ss_pred CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-------
Confidence 46999999999999999999987 4999999999876666666778999999999996 5999999988743
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||+++++|.+++.....+++.+++.++.||+.||+|||++
T Consensus 128 ---------------------------------~~~~~lv~E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~ 174 (390)
T 2zmd_A 128 ---------------------------------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174 (390)
T ss_dssp ---------------------------------SSEEEEEEECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ---------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 35689999977789999999888999999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---------
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--------- 583 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--------- 583 (1170)
||+||||||+|||++ ++.+||+|||+++.+..... .......+||+.|+|||++.+.
T Consensus 175 ~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 240 (390)
T 2zmd_A 175 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------SVVKDSQVGAVNYMPPEAIKDMSSSRENGKS 240 (390)
T ss_dssp TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----------------------CCSCCCGGGCCHHHHHCC---------
T ss_pred CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc-------------cccCCCCCcCCCccChHHhhhcccccccccc
Confidence 999999999999995 68999999999986532210 1112346899999999998752
Q ss_pred -CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 584 -PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 584 -~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
..++.++|||||||++|||++ ||............+.......+.....++++.+||++||+.||.+|||+.++|+
T Consensus 241 ~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 241 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 358999999999999999997 7865433322222222111111122233578999999999999999999999999
Q ss_pred ccCCCCch
Q 001059 660 DALPPQME 667 (1170)
Q Consensus 660 ~~~~~~~~ 667 (1170)
|||+....
T Consensus 321 hp~~~~~~ 328 (390)
T 2zmd_A 321 HPYVQIQT 328 (390)
T ss_dssp SHHHHSCC
T ss_pred CcCccccC
Confidence 99986554
No 103
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=7.8e-40 Score=390.26 Aligned_cols=258 Identities=22% Similarity=0.316 Sum_probs=208.9
Q ss_pred CCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc------cCCCceeEEE
Q 001059 348 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL------QHQHVVRYYQ 421 (1170)
Q Consensus 348 ~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l------~HpnIV~l~~ 421 (1170)
.+......+|++++.||+|+||+||+|.+..+|+.||||+++. .......+.+|+.+++.+ +||||+++++
T Consensus 90 ~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~ 166 (429)
T 3kvw_A 90 VPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLE 166 (429)
T ss_dssp CTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEE
T ss_pred cCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC---ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEe
Confidence 3445566789999999999999999999999999999999963 234456788899998888 5779999998
Q ss_pred EEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHH
Q 001059 422 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLF 499 (1170)
Q Consensus 422 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~ 499 (1170)
+|.. ...+|+|||||+++|.+++.... .+++..++.++
T Consensus 167 ~~~~----------------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~ 206 (429)
T 3kvw_A 167 NFTF----------------------------------------RNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206 (429)
T ss_dssp EEEE----------------------------------------TTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHH
T ss_pred eccc----------------------------------------CCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHH
Confidence 8733 35789999999999999987654 49999999999
Q ss_pred HHHHHHHHHHHhCCccccCCCCCceeecCCCC--EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARND--IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 500 ~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~--vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
.||+.||+|||++||+||||||+|||++.++. +||+|||+|+.... .....+||+.|+||
T Consensus 207 ~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~------------------~~~~~~gt~~y~aP 268 (429)
T 3kvw_A 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ------------------RVYTYIQSRFYRAP 268 (429)
T ss_dssp HHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC------------------CCCSSCSCGGGCCH
T ss_pred HHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCC------------------cccccCCCCCccCh
Confidence 99999999999999999999999999999887 99999999975321 12345899999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc-------------------------
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW------------------------- 629 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~------------------------- 629 (1170)
|++.+ ..++.++|||||||++|||++ ||......+....+....+..+..+
T Consensus 269 E~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (429)
T 3kvw_A 269 EVILG-ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTL 347 (429)
T ss_dssp HHHHT-BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECC
T ss_pred HHHhC-CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCccccccccc
Confidence 99988 568999999999999999997 7766655544433332211111100
Q ss_pred -------------------------------ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 630 -------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 630 -------------------------------~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
...++++.+||++||+.||.+|||+.++|+||||.+..
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~ 416 (429)
T 3kvw_A 348 SDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL 416 (429)
T ss_dssp CC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred ccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCC
Confidence 01256789999999999999999999999999998754
No 104
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5e-40 Score=366.93 Aligned_cols=254 Identities=26% Similarity=0.446 Sum_probs=215.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...++|++.+.||+|+||+||+|.++.++..||+|++...... ..+.+.+|+.+++.++||||++++++|.+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------ 77 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPNIIRLYETFED------ 77 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEec------
Confidence 3457899999999999999999999999999999999754332 35678999999999999999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+|||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 123 (277)
T 3f3z_A 78 ----------------------------------NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH 123 (277)
T ss_dssp ----------------------------------SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 456899999996 599999988888999999999999999999999
Q ss_pred hCCccccCCCCCceee---cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 511 GQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi---~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
++||+||||||+|||+ +.++.+||+|||++....... ......||+.|+|||++.+ .++
T Consensus 124 ~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~--~~~ 185 (277)
T 3f3z_A 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK----------------MMRTKVGTPYYVSPQVLEG--LYG 185 (277)
T ss_dssp HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS----------------CBCCCCSCTTTCCHHHHTT--CBC
T ss_pred HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc----------------chhccCCCCCccChHHhcc--cCC
Confidence 9999999999999999 778899999999997653211 1234579999999999976 489
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.++|||||||++|+|++ ||......+............+. .+...++++.+||.+||+.||.+|||+.++|+|+||
T Consensus 186 ~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 265 (277)
T 3f3z_A 186 PECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 265 (277)
T ss_dssp TTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred chhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence 99999999999999996 88776666655555544444433 344678899999999999999999999999999987
Q ss_pred CC
Q 001059 664 PQ 665 (1170)
Q Consensus 664 ~~ 665 (1170)
.+
T Consensus 266 ~~ 267 (277)
T 3f3z_A 266 EK 267 (277)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 105
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-40 Score=400.16 Aligned_cols=257 Identities=26% Similarity=0.409 Sum_probs=215.6
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
....++|.+.+.||+|+||+||+|++..+|+.||||+++.... .......+.+|+.+|+.++||||+++++++..
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~---- 87 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST---- 87 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE----
Confidence 3456899999999999999999999999999999999975321 11234678999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|
T Consensus 88 ------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~ 131 (476)
T 2y94_A 88 ------------------------------------PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDY 131 (476)
T ss_dssp ------------------------------------SSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999996 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++...... .....+||+.|+|||++.+...++.
T Consensus 132 LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~ 195 (476)
T 2y94_A 132 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----------------FLRTSCGSPNYAAPEVISGRLYAGP 195 (476)
T ss_dssp HHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC----------------CBCCCCSCSTTCCHHHHTTCCBCSH
T ss_pred HHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc----------------cccccCCCcCeEChhhccCCCCCCC
Confidence 999999999999999999999999999999998653211 1234589999999999998544578
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
++|||||||++|+|++ ||...........+.......| ...++++.+||++||+.||.+|||+.++++|||+.+
T Consensus 196 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~ 272 (476)
T 2y94_A 196 EVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP---QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272 (476)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC---TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred cceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC---ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence 9999999999999997 8876655555544444333333 345679999999999999999999999999999865
Q ss_pred c
Q 001059 666 M 666 (1170)
Q Consensus 666 ~ 666 (1170)
.
T Consensus 273 ~ 273 (476)
T 2y94_A 273 D 273 (476)
T ss_dssp T
T ss_pred c
Confidence 3
No 106
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.9e-40 Score=377.70 Aligned_cols=265 Identities=26% Similarity=0.412 Sum_probs=211.3
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.+.+.++|++.+.||+|+||+||+|++..+|+.||||+++.... .......+.+|+.+++.++||||+++++++....
T Consensus 7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 85 (311)
T 3ork_A 7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET- 85 (311)
T ss_dssp CSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-
T ss_pred cceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-
Confidence 34567899999999999999999999999999999999976543 3344567899999999999999999999875431
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
.....+|+|||||+ ++|.+++...+.+++..++.++.||+.||+
T Consensus 86 -----------------------------------~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~ 130 (311)
T 3ork_A 86 -----------------------------------PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130 (311)
T ss_dssp -----------------------------------TTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 11346799999996 599999998889999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++.+...... .......+||+.|+|||++.+ ..++
T Consensus 131 ~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~-~~~~ 197 (311)
T 3ork_A 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS------------VTQTAAVIGTAQYLSPEQARG-DSVD 197 (311)
T ss_dssp HHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------------------CCTTCCHHHHHT-CCCC
T ss_pred HHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccc------------cccccccCcCcccCCHHHhcC-CCCC
Confidence 999999999999999999999999999999999865422100 111234579999999999988 5789
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.++|||||||++|||++ ||...................+. .....++++.+||.+||+.||.+||++.++++|+|+
T Consensus 198 ~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 198 ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred chHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 99999999999999997 88777666655555443322221 234567899999999999999999999999998754
No 107
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.7e-40 Score=383.70 Aligned_cols=261 Identities=25% Similarity=0.391 Sum_probs=211.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|.+.+.||+|+||+||+|.++.+|+.||||++............+.+|+.+++.++||||++++++|...+.
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 115 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS---- 115 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS----
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCC----
Confidence 4579999999999999999999999999999999998665555566789999999999999999999998843210
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
......+|+||||++++|.+.+. ..+++..++.++.||+.||+|||++
T Consensus 116 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~ 163 (371)
T 4exu_A 116 ------------------------------LRNFYDFYLVMPFMQTDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSA 163 (371)
T ss_dssp ------------------------------STTCCCCEEEEECCCEEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cccceeEEEEEccccccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 01123458999999999988874 3499999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+...++.++||
T Consensus 164 ~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di 225 (371)
T 4exu_A 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------MTGYVVTRWYRAPEVILSWMHYNQTVDI 225 (371)
T ss_dssp TCCCSCCCGGGEEECTTCCEEECSTTCC--------------------------CTTCCCTTSCHHHHSCCSCCCTTHHH
T ss_pred CCcCCCcCHHHeEECCCCCEEEEecCcccccccC------------------cCCcccCccccCHHHhcCCCCCCcHHhH
Confidence 9999999999999999999999999999854311 2345789999999999875678999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~e~~~LI~ 641 (1170)
|||||++|+|++ ||......+....+....+..+ ..+...++++.+||+
T Consensus 226 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (371)
T 4exu_A 226 WSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLE 305 (371)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHH
Confidence 999999999997 8876655544444332221111 112345789999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||+.||.+|||+.++|+||||....
T Consensus 306 ~~L~~dP~~Rpt~~ell~hp~f~~~~ 331 (371)
T 4exu_A 306 KMLELDVDKRLTAAQALTHPFFEPFR 331 (371)
T ss_dssp HHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HHCCCChhhcCCHHHHhcCcccccCC
Confidence 99999999999999999999998653
No 108
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7e-40 Score=381.70 Aligned_cols=263 Identities=24% Similarity=0.353 Sum_probs=211.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++++.||+|+||.||+|++..+|+.||||++... ........+.+|+.+|++++||||+++++++....
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 98 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT------- 98 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS-------
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCC-------
Confidence 5899999999999999999999999999999999743 33445578899999999999999999998874321
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
......+|++|||++++|.+++.. ..+++..++.++.||+.||+|||++||
T Consensus 99 ----------------------------~~~~~~~~iv~e~~~~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i 149 (364)
T 3qyz_A 99 ----------------------------IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 149 (364)
T ss_dssp ----------------------------TTTCCCEEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ----------------------------ccccceEEEEEcccCcCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 012356899999999999998865 469999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+|||++.++.+||+|||+++........ .......+||+.|+|||++.+...++.++||||
T Consensus 150 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws 217 (364)
T 3qyz_A 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217 (364)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB------------CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHH
T ss_pred ecCCCChHhEEECCCCCEEEEeCcceEecCCCCCc------------cccccccccccCCCCCHHhcCCCCCCcchhHHH
Confidence 99999999999999999999999999865432110 011244589999999998776566899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHHHc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~e~~~LI~~~ 643 (1170)
|||++|+|++ ||......+....+....+..+ ..+...++++.+||.+|
T Consensus 218 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 297 (364)
T 3qyz_A 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297 (364)
T ss_dssp HHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHH
Confidence 9999999997 7765443333222221111110 11234577899999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCc
Q 001059 644 MSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|+.||.+|||+.++|+||||.+.
T Consensus 298 L~~dP~~R~t~~e~l~hp~~~~~ 320 (364)
T 3qyz_A 298 LTFNPHKRIEVEQALAHPYLEQY 320 (364)
T ss_dssp TCSSTTTSCCHHHHHTSGGGTTT
T ss_pred cCCChhhCCCHHHHhcCcchhhc
Confidence 99999999999999999999875
No 109
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.6e-39 Score=366.48 Aligned_cols=264 Identities=24% Similarity=0.412 Sum_probs=217.5
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-------hhhHHHHHHHHHHHHhcc-CCCceeEEEE
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-------LPVNDRILREVATLSRLQ-HQHVVRYYQA 422 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-------~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~ 422 (1170)
..+.++|++.+.||+|+||.||+|.++.+|+.||||+++..... ....+.+.+|+.+++++. ||||++++++
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 45678999999999999999999999999999999999765421 123456889999999995 9999999998
Q ss_pred EeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHH
Q 001059 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQ 501 (1170)
Q Consensus 423 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~q 501 (1170)
+.. ...+|+||||++ ++|.+++.....+++..++.++.|
T Consensus 93 ~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~q 132 (298)
T 1phk_A 93 YET----------------------------------------NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132 (298)
T ss_dssp EEC----------------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHH
T ss_pred ecc----------------------------------------CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHH
Confidence 732 457899999997 599999998888999999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
|+.||+|||++||+||||||+|||++.++.+||+|||++....... ......||+.|+|||++.
T Consensus 133 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~ 196 (298)
T 1phk_A 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----------------KLREVCGTPSYLAPEIIE 196 (298)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHH
T ss_pred HHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCc----------------ccccccCCccccCHHHhc
Confidence 9999999999999999999999999999999999999998653211 123457999999999985
Q ss_pred -----CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCC
Q 001059 582 -----GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRP 652 (1170)
Q Consensus 582 -----~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RP 652 (1170)
....++.++||||||+++|+|++ ||...................+ +.+...++++.+||.+||+.||.+||
T Consensus 197 ~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 276 (298)
T 1phk_A 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY 276 (298)
T ss_dssp HHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSC
T ss_pred cccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCC
Confidence 22458899999999999999997 7776655554444444333333 34567788999999999999999999
Q ss_pred CHHHHHhccCCCCchHHH
Q 001059 653 SATELLQDALPPQMEYEL 670 (1170)
Q Consensus 653 ta~eiL~~~~~~~~~~~~ 670 (1170)
|+.++++||||.+...+.
T Consensus 277 s~~~ll~h~~~~~~~~~~ 294 (298)
T 1phk_A 277 TAEEALAHPFFQQYVVEE 294 (298)
T ss_dssp CHHHHTTSGGGCTTC---
T ss_pred CHHHHHhChHhhhccchh
Confidence 999999999999876543
No 110
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.2e-40 Score=380.97 Aligned_cols=252 Identities=25% Similarity=0.405 Sum_probs=209.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|+.++.||+|+||+||+|++..+|+.||||++...... ....+.+.+|+.+|+.++||||++++++|..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 125 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------- 125 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--------
Confidence 4599999999999999999999999999999999765432 3344678999999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+|+|.+.+.. ...+++..++.++.||+.||+|||++
T Consensus 126 --------------------------------~~~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 173 (348)
T 1u5q_A 126 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173 (348)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356899999999999888864 56799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
||+||||||+|||++.++.+||+|||+++.... ....+||+.|+|||++.+ ...++.++
T Consensus 174 ~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 234 (348)
T 1u5q_A 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 234 (348)
T ss_dssp TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-------------------BCCCCSCGGGCCHHHHHTTSSCCBCTHH
T ss_pred CeeeCCCCHHHEEECCCCCEEEeeccCceecCC-------------------CCcccCCcceeCHhhhccccCCCCCcHH
Confidence 999999999999999999999999999975421 134579999999999853 24689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||||||++|||++ ||.............. ....+......++.+.+||.+||+.||.+|||+.++++|+|+...
T Consensus 235 DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 235 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 312 (348)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence 99999999999997 7766555444443333 222222234567789999999999999999999999999987543
No 111
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2e-40 Score=380.64 Aligned_cols=255 Identities=25% Similarity=0.457 Sum_probs=192.0
Q ss_pred ccccCCceEE---eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeec
Q 001059 351 SRYLNDFEEL---QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFET 426 (1170)
Q Consensus 351 ~~~~~~y~~~---~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~ 426 (1170)
+.+.++|++. +.||+|+||+||+|.++.+|+.||||++... ....+.+|+.+++.+. ||||++++++|.+
T Consensus 4 ~~f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~- 77 (325)
T 3kn6_A 4 SPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHD- 77 (325)
T ss_dssp CHHHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-
T ss_pred CcchhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-
Confidence 3455677775 7899999999999999999999999999642 3456889999999997 9999999998832
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||+ ++|.+++.....+++.+++.++.||+.|
T Consensus 78 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~ 118 (325)
T 3kn6_A 78 ---------------------------------------QLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA 118 (325)
T ss_dssp ---------------------------------------SSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCC---CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
|+|||++||+||||||+|||++.++ .+||+|||+++...... ......+||+.|+|||++.+
T Consensus 119 l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~ 183 (325)
T 3kn6_A 119 VSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN---------------QPLKTPCFTLHYAAPELLNQ 183 (325)
T ss_dssp HHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------------------------------------
T ss_pred HHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC---------------CcccccCCCcCccCHHHhcC
Confidence 9999999999999999999998765 79999999998543211 11234578999999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhH-------HHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCC
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAME-------RQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDR 651 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~-------~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~R 651 (1170)
..++.++|||||||++|+|++ ||..... .+....+.......+ +.+...++++.+||.+||+.||.+|
T Consensus 184 -~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 262 (325)
T 3kn6_A 184 -NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKR 262 (325)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTC
T ss_pred -CCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHC
Confidence 568999999999999999997 7765332 222233332222233 2445678899999999999999999
Q ss_pred CCHHHHHhccCCCCc
Q 001059 652 PSATELLQDALPPQM 666 (1170)
Q Consensus 652 Pta~eiL~~~~~~~~ 666 (1170)
||+.++++|+|+...
T Consensus 263 pt~~ell~h~w~~~~ 277 (325)
T 3kn6_A 263 LKMSGLRYNEWLQDG 277 (325)
T ss_dssp CCTTTSTTCGGGCTT
T ss_pred CCHHHHhcChhhccC
Confidence 999999999999764
No 112
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.8e-40 Score=368.55 Aligned_cols=253 Identities=28% Similarity=0.488 Sum_probs=210.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
..+++|++.+.||+|+||+||+|.+..++..||||++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T 3fdn_A 6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD----- 80 (279)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----
T ss_pred eecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-----
Confidence 346899999999999999999999999999999999864321 11234568899999999999999999998732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+||||++ ++|.+.+.....+++..++.++.||+.||+||
T Consensus 81 -----------------------------------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~L 125 (279)
T 3fdn_A 81 -----------------------------------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125 (279)
T ss_dssp -----------------------------------SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999997 59999998888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||++...... ......||+.|+|||++.+ ..++.+
T Consensus 126 H~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~ 187 (279)
T 3fdn_A 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----------------RRTDLCGTLDYLPPEMIEG-RMHDEK 187 (279)
T ss_dssp HTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-------------------------CCCCTTCCHHHHTT-CCCCTT
T ss_pred HhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc-----------------cccccCCCCCccCHhHhcc-CCCCcc
Confidence 9999999999999999999999999999998643211 1234579999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
+||||||+++|+|++ ||......+............|. ..++++.+||.+||+.||.+|||+.++++|||+..
T Consensus 188 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~ 263 (279)
T 3fdn_A 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263 (279)
T ss_dssp HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCT---TSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred chhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCC---cCCHHHHHHHHHHhccChhhCCCHHHHhhCccccC
Confidence 999999999999996 77766555554444433333333 35678999999999999999999999999998754
No 113
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.9e-40 Score=374.20 Aligned_cols=268 Identities=26% Similarity=0.434 Sum_probs=206.6
Q ss_pred CccccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 350 SSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 350 ~~~~~~~y~~~-~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.+++.+.|++. +.||+|+||+||+|.++.+|+.||||++..... .....+.+|+.+|+++ +||||+++++++.+
T Consensus 7 ~~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-- 82 (316)
T 2ac3_A 7 SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG--HIRSRVFREVEMLYQCQGHRNVLELIEFFEE-- 82 (316)
T ss_dssp CCCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS--CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE--
T ss_pred CcccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc--hhHHHHHHHHHHHHHhcCCCCeeeEEEEEee--
Confidence 45677889996 789999999999999999999999999975432 3456789999999985 79999999998743
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||
T Consensus 83 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l 124 (316)
T 2ac3_A 83 --------------------------------------EDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASAL 124 (316)
T ss_dssp --------------------------------------TTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 357899999997 69999999888899999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCC---EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
+|||++||+||||||+|||++.++. +||+|||++............ ........+||+.|+|||++.+.
T Consensus 125 ~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~ 196 (316)
T 2ac3_A 125 DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI--------STPELLTPCGSAEYMAPEVVEAF 196 (316)
T ss_dssp HHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------------------------CCSGGGCCHHHHHHT
T ss_pred HHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccc--------cccccccccCCcCccChHHhhcc
Confidence 9999999999999999999998765 999999999865322110000 00112345799999999998641
Q ss_pred ----CCCCccchhHHHHHHHHHhhc---CCCchh---------------HHHHHHHHhhhcCCCCC-ccccCCHHHHHHH
Q 001059 584 ----PKIDEKADMYSLGIVFFELWH---PFSTAM---------------ERQIVLSDLKQKGELPP-SWVAKFSEQESLL 640 (1170)
Q Consensus 584 ----~~~~~ksDIwSlGviL~ELlt---Pf~~~~---------------~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI 640 (1170)
..++.++|||||||++|||++ ||.... .......+......+|. .+...++++.+||
T Consensus 197 ~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 276 (316)
T 2ac3_A 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLI 276 (316)
T ss_dssp SHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHH
T ss_pred cccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHH
Confidence 237899999999999999997 775432 11222222222333332 2345778999999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
++||+.||.+|||+.++++|||+.+..
T Consensus 277 ~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 277 SKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp HHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred HHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 999999999999999999999998764
No 114
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.2e-40 Score=383.18 Aligned_cols=253 Identities=24% Similarity=0.405 Sum_probs=207.4
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
..+.++|++.+.||+|+||+||+|.++.+|+.||||+++..... ..+|+.+|.++ +||||++++++|.
T Consensus 18 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~----- 86 (342)
T 2qr7_A 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYD----- 86 (342)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEE-----
T ss_pred cCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEE-----
Confidence 44668899999999999999999999999999999999754332 35688888888 7999999999873
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...+|+|||||+ |+|.+.+...+.+++..++.++.||+.||+|
T Consensus 87 -----------------------------------~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~ 131 (342)
T 2qr7_A 87 -----------------------------------DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEY 131 (342)
T ss_dssp -----------------------------------CSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2467899999996 5999999988889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC----CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
||++||+||||||+|||+..+ +.+||+|||+++...... ......+||+.|+|||++.+ .
T Consensus 132 lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~ 195 (342)
T 2qr7_A 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN---------------GLLMTPCYTANFVAPEVLER-Q 195 (342)
T ss_dssp HHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT---------------CCBCCSSCCSSCCCHHHHHH-H
T ss_pred HHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC---------------CceeccCCCccccCHHHhcC-C
Confidence 999999999999999998543 359999999998653211 01234589999999999987 4
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCch---hHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTA---MERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~---~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
.|+.++|||||||++|||++ ||... ...+....+......++ ..+...++++.+||++||..||.+|||+.++
T Consensus 196 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~i 275 (342)
T 2qr7_A 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALV 275 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 58899999999999999997 77642 23333333333333333 2456678899999999999999999999999
Q ss_pred HhccCCCC
Q 001059 658 LQDALPPQ 665 (1170)
Q Consensus 658 L~~~~~~~ 665 (1170)
++|||+..
T Consensus 276 l~hp~~~~ 283 (342)
T 2qr7_A 276 LRHPWIVH 283 (342)
T ss_dssp TTSHHHHT
T ss_pred hcCCeecC
Confidence 99999854
No 115
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A*
Probab=100.00 E-value=7.5e-40 Score=386.38 Aligned_cols=355 Identities=11% Similarity=0.037 Sum_probs=270.7
Q ss_pred cCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecCCCC
Q 001059 711 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 711 ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+.+.++|+.||+|.++.+++.|++.+++.|.++||++|.||+| ++. ++.+.+.++||+ .|++|+.++|||+.|
T Consensus 15 ~~~~~~G~~d~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~em~~-~d~~~~~~~LrP~~~ 93 (401)
T 1evl_A 15 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNC 93 (401)
T ss_dssp CCTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTHHHHSGGGCCE-EEETTEEEEECSCSH
T ss_pred ecCCCCcceEECchHHHHHHHHHHHHHHHHHHcCCEEEECCeeccHHHHHhcCcHhhhchhhEe-EecCCceEEEcCCCC
Confidence 4456899999999999999999999999999999999999999 222 224456789999 999999999999999
Q ss_pred HHHHHHHHhC----CCCceeEEEecCeEEcCCC--CC---CCCceeEeEEEEeCCCCcccHH---HHHHHHHHHHHHcCC
Q 001059 785 LPFIRWAISN----QKSSFKRYEISSVYRRAIG--HS---PPNRYLQGDFDIIGGASALTEA---EVLKVTMDIVTRFFH 852 (1170)
Q Consensus 785 ~~iaR~~~~~----~~~P~r~~Y~g~VfR~e~~--~~---~~~ef~Q~GvEiiG~~~~~aDa---Evi~la~~~l~~lgi 852 (1170)
++++|+++.+ +..|+|+||+|+|||+|++ +. |.|||+|+|+|+||. ...+|+ |++.++.++++.||+
T Consensus 94 ~~~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~p~~Gl~R~reF~q~d~~~f~~-~~~~~~e~~e~i~~~~~~~~~lgl 172 (401)
T 1evl_A 94 PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCT-EEQIRDEVNGCIRLVYDMYSTFGF 172 (401)
T ss_dssp HHHHHHHTSSCCBGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEEC-GGGHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHhhhhhhhhCChhhccccceecCCCCcccccccccCcEEecceEEeCC-HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999864 2469999999999999884 54 566799999999995 567787 599999999999999
Q ss_pred CcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHh
Q 001059 853 AESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF 932 (1170)
Q Consensus 853 ~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~ 932 (1170)
.+ +.+.++++. -..+|..+.+... - ...++++...+++
T Consensus 173 ~~-~~~~~~~~~-----~~~~~~~~~~~~a----~------------------~~~~~~l~~~g~~-------------- 210 (401)
T 1evl_A 173 EK-IVVKLSTRP-----EKRIGSDEMWDRA----E------------------ADLAVALEENNIP-------------- 210 (401)
T ss_dssp SC-CEEEEECCC-----SSCCSCHHHHHHH----H------------------HHHHHHHHHTTCC--------------
T ss_pred Cc-eEEEEecCC-----cccCCCHHHHHHH----H------------------HHHHHHHHhcCCC--------------
Confidence 74 999999853 0011111100000 0 0001111111110
Q ss_pred cCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCC--CCCcccceEEEEEeccCCCcccccccceecc
Q 001059 933 CGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPP--IESYHRNLFFQVFSVKEKYPATLVEGTLLAV 1010 (1170)
Q Consensus 933 ~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvr--gldYYtG~VFe~~~~~~~~~~~~~~~~~I~~ 1010 (1170)
+..++. + ...+| . .+|+.+++ |++||+|++|.-|.. +.+.
T Consensus 211 --------------~~~~~~------~--~~~y~--~--~~d~~~~~~~G~~~~~gt~~~d~~l------------~~~~ 252 (401)
T 1evl_A 211 --------------FEYQLG------E--GAFYG--P--KIEFTLYDCLDRAWQCGTVQLDFSL------------PSRL 252 (401)
T ss_dssp --------------CEEETT------C--SBTTB--C--EEEEEEECTTCCEEEEEEEEEESSH------------HHHT
T ss_pred --------------ceecCC------C--ccccC--C--CcCeEEEecCCCeEEeeeeeecccc------------cccc
Confidence 000000 0 00011 2 36777777 999999999943321 2467
Q ss_pred ccccchhhhhcccccccccCCCCCCCCceEE-ec--cHHHHHhhccCC--CCCCCCCCCceEEEEEcCCCccHHHHHHHH
Q 001059 1011 GGRYDYLLHRMWDREYVGYASRTNPPSGVGA-SL--ALETIIQHYPVD--FKPVRNEAGTSVLVCSRGGGGLLVERMELV 1085 (1170)
Q Consensus 1011 GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGf-ai--glerL~~~L~~~--~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia 1085 (1170)
||||++. .|. ..+|++|+ ++ |+|||+.+|.+. ...+...+|.+|+|++.+ ++....|.+++
T Consensus 253 ~~~y~~~---~g~----------~~~p~~~~~~~~GgieRli~~l~e~~~~~~p~~~ap~~v~vi~~~-~~~~~~a~~l~ 318 (401)
T 1evl_A 253 SASYVGE---DNE----------RKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT-DSQSEYVNELT 318 (401)
T ss_dssp TCCEECT---TSC----------EECCEEEEEEEEEEHHHHHHHHHHHHTTCCCTTTCSSCEEEEESS-GGGHHHHHHHH
T ss_pred CCEEECC---CCC----------CcCcEEEEecCCCcHHHHHHHHHHHhCCcCCCCCCCeEEEEEecC-HHHHHHHHHHH
Confidence 9999854 222 23699999 88 999999887632 222223467899999996 67889999999
Q ss_pred HHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 001059 1086 AELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1086 ~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~~ 1162 (1170)
+.||+.|++|++++. ++++++++++|++.|+|++|+||++|+++|+|+||+|.+++|..|+++++++.+++.++..
T Consensus 319 ~~Lr~~Gi~v~~d~~-~~~~~~k~~~A~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~q~~v~~~el~~~l~~~~~~~ 394 (401)
T 1evl_A 319 QKLSNAGIRVKADLR-NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSR 394 (401)
T ss_dssp HHHHHTTCCEEEECC-SSCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEETTSCEEEEEEHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEECcchhhCCeEEEEECCCCceEEeeHHHHHHHHHHHHhhh
Confidence 999999999998876 6799999999999999999999999999999999999999999999999999999888753
No 116
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=6e-40 Score=390.18 Aligned_cols=257 Identities=26% Similarity=0.390 Sum_probs=206.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..+|++.+.||+|+||+||+|+++.+|+.||||++..... ...+|+.+|+.++|||||+++++|...+.
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~----- 121 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGE----- 121 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEET-----
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCC-----
Confidence 4579999999999999999999999999999999864322 23479999999999999999998855310
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
..+..++++||||++++|.+.+. ....+++..++.++.||+.||+||
T Consensus 122 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L 172 (420)
T 1j1b_A 122 -----------------------------KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172 (420)
T ss_dssp -----------------------------TTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------CCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 12345788999999998877664 346799999999999999999999
Q ss_pred HhCCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 510 HGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
|++||+||||||+|||++.+ +.+||+|||+++.+.... .....+||+.|+|||++.+...|+.
T Consensus 173 H~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~ 236 (420)
T 1j1b_A 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNVSYICSRYYRAPELIFGATDYTS 236 (420)
T ss_dssp HTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC----------------CCCSCCSCTTSCCHHHHTTCSSCCT
T ss_pred HHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCC----------------CceeeeeCCCcCCHHHHcCCCCCCc
Confidence 99999999999999999965 568999999998643211 1234689999999999987557999
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-----------------CCCC----c-----cccCCHHHHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------ELPP----S-----WVAKFSEQESL 639 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-----------------~~p~----~-----~~~~~~e~~~L 639 (1170)
++|||||||++|||++ ||......+....++...+ .+|. . ....++++.+|
T Consensus 237 ~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~L 316 (420)
T 1j1b_A 237 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 316 (420)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHH
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHH
Confidence 9999999999999997 7876655444443332111 1111 0 12346799999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|++||..||.+|||+.++++|+||...
T Consensus 317 i~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 317 CSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp HHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred HHHhccCChhHCCCHHHHhCCHhhccc
Confidence 999999999999999999999999754
No 117
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=382.13 Aligned_cols=251 Identities=27% Similarity=0.398 Sum_probs=209.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh------hHHHHHHHHHHHHhccCCCceeEEEEEe
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------VNDRILREVATLSRLQHQHVVRYYQAWF 424 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~------~~~~~~~Ev~iL~~l~HpnIV~l~~~~~ 424 (1170)
+.+.++|++.+.||+|+||+||+|+++.+|+.||||+++....... ....+.+|+.+|+.++||||++++++|.
T Consensus 20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~ 99 (335)
T 3dls_A 20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE 99 (335)
T ss_dssp THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE
T ss_pred cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 4567899999999999999999999999999999999986542211 2345778999999999999999999883
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-C-cHHHHHHhcCCCCHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-R-TLRQVFESYDHFDKELAWHLFRQI 502 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-g-sL~~~l~~~~~l~e~~~~~i~~qI 502 (1170)
+ ...+|+||||++ | +|.+++.....+++..++.++.||
T Consensus 100 ~----------------------------------------~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi 139 (335)
T 3dls_A 100 N----------------------------------------QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139 (335)
T ss_dssp C----------------------------------------SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHH
T ss_pred e----------------------------------------CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHH
Confidence 2 457899999985 5 899999988899999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
+.||+|||++||+||||||+|||++.++.+||+|||+++...... .....+||+.|+|||++.+
T Consensus 140 ~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~ 203 (335)
T 3dls_A 140 VSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK----------------LFYTFCGTIEYCAPEVLMG 203 (335)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTC----------------CBCEECSCGGGCCHHHHTT
T ss_pred HHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCC----------------ceeccCCCccccChhhhcC
Confidence 999999999999999999999999999999999999998653211 1234579999999999988
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
...++.++|||||||++|+|++ ||...... .. . ........++++.+||.+||+.||.+|||+.++++
T Consensus 204 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~-~--~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 204 NPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VE-A--AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp CCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TT-T--CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------Hh-h--ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 5445889999999999999997 77653221 11 1 11122345779999999999999999999999999
Q ss_pred ccCCCCc
Q 001059 660 DALPPQM 666 (1170)
Q Consensus 660 ~~~~~~~ 666 (1170)
|||+.+.
T Consensus 275 hp~~~~~ 281 (335)
T 3dls_A 275 DPWVTQP 281 (335)
T ss_dssp CTTTTCC
T ss_pred CccccCC
Confidence 9999774
No 118
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-39 Score=382.51 Aligned_cols=284 Identities=25% Similarity=0.372 Sum_probs=208.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC-
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD- 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~- 432 (1170)
.++|++.+.||+|+||+||+|++..+|+.||||++...... ..+|+.+|+.++||||++++++|...+.....
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 46899999999999999999999999999999998743222 34799999999999999999998654210000
Q ss_pred ----CCC-CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH----hcCCCCHHHHHHHHHHHH
Q 001059 433 ----GDS-MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 433 ----~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qI~ 503 (1170)
.+. .++... ... ...............++++|||||+++|.+.+. ....+++..++.++.||+
T Consensus 80 ~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~ 151 (383)
T 3eb0_A 80 PQPPDDHNKLGGKN--NGV------NNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLF 151 (383)
T ss_dssp --------------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred cccccccccccccc--ccc------ccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 000 000000 000 000000000113456799999999998877765 346799999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeec-CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
.||+|||++||+||||||+|||++ .++.+||+|||+|+...... ......||+.|+|||++.+
T Consensus 152 ~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~ 215 (383)
T 3eb0_A 152 RAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----------------PSVAYICSRFYRAPELMLG 215 (383)
T ss_dssp HHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS----------------CCCCCCCCSSCCCHHHHTT
T ss_pred HHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC----------------CCcCcccCCCccCHHHhcC
Confidence 999999999999999999999998 57899999999998653211 1234578999999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-----------------CC---------ccccCC
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-----------------PP---------SWVAKF 633 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-----------------p~---------~~~~~~ 633 (1170)
...++.++|||||||++|||++ ||......+....++...+.. |. .....+
T Consensus 216 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (383)
T 3eb0_A 216 ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTP 295 (383)
T ss_dssp CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCC
T ss_pred CCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCC
Confidence 6669999999999999999997 887666555544443321111 10 112356
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+++.+||.+||+.||.+|||+.++|+||||....
T Consensus 296 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (383)
T 3eb0_A 296 SLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLR 329 (383)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence 7899999999999999999999999999997653
No 119
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.6e-40 Score=411.62 Aligned_cols=261 Identities=26% Similarity=0.378 Sum_probs=222.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
..+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|..+ +||||++++++|.
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~----- 412 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ----- 412 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB-----
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE-----
Confidence 346899999999999999999999999999999999974321 112345688899999988 7999999998872
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|
T Consensus 413 -----------------------------------~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~ 457 (674)
T 3pfq_A 413 -----------------------------------TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457 (674)
T ss_dssp -----------------------------------CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------eCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 3467899999996 5999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|||||||||+||||+.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.
T Consensus 458 LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------~~~~~~~GT~~Y~APE~l~~-~~~~~ 521 (674)
T 3pfq_A 458 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---------------VTTKTFCGTPDYIAPEIIAY-QPYGK 521 (674)
T ss_dssp HHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT---------------CCBCCCCSCSSSCCHHHHTC-CCBST
T ss_pred HHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC---------------cccccccCCCcccCHhhhcC-CCCCc
Confidence 999999999999999999999999999999998532111 11345689999999999987 57999
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-----HHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-----~eiL~~ 660 (1170)
++|||||||+||||++ ||......+....++.....+|. ..++++.+||++||+.||.+||++ ++|++|
T Consensus 522 ~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 522 SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCT---TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred cceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 9999999999999997 89887777777777665555554 467799999999999999999997 999999
Q ss_pred cCCCCchHHHH
Q 001059 661 ALPPQMEYELL 671 (1170)
Q Consensus 661 ~~~~~~~~~~~ 671 (1170)
+||....|+.+
T Consensus 599 ~ff~~i~w~~l 609 (674)
T 3pfq_A 599 AFFRYIDWEKL 609 (674)
T ss_dssp GGGSSCCHHHH
T ss_pred ccccCCCHHHH
Confidence 99999988754
No 120
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=5.3e-40 Score=402.03 Aligned_cols=258 Identities=27% Similarity=0.416 Sum_probs=213.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.++|||||+++++|.+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~------- 255 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET------- 255 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-------
Confidence 5789999999999999999999999999999999975321 11234568899999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+ |+|.+++...+. +++..++.++.||+.||+||
T Consensus 256 ---------------------------------~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yL 302 (576)
T 2acx_A 256 ---------------------------------KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL 302 (576)
T ss_dssp ---------------------------------SSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 699999876543 99999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++++||+|||+|+...... .....+||+.|+|||++.+ ..|+.+
T Consensus 303 H~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~----------------~~~~~~GT~~Y~APEvl~~-~~~~~~ 365 (576)
T 2acx_A 303 HRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------TIKGRVGTVGYMAPEVVKN-ERYTFS 365 (576)
T ss_dssp HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC----------------CEECCCSCGGGCCHHHHTT-CEESSH
T ss_pred HHCCEeccCCchheEEEeCCCCeEEEecccceecccCc----------------cccccCCCccccCHHHHcC-CCCCcc
Confidence 99999999999999999999999999999998643211 1234589999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchh----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHH
Q 001059 590 ADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATEL 657 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~ei 657 (1170)
+|||||||++|||++ ||.... .......+......+| ...++++++||++||+.||.+|| ++.++
T Consensus 366 ~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p---~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~ei 442 (576)
T 2acx_A 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS---ERFSPQARSLCSQLLCKDPAERLGCRGGSAREV 442 (576)
T ss_dssp HHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHH
T ss_pred chHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC---ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHH
Confidence 999999999999997 886542 1222222222222233 35678999999999999999999 89999
Q ss_pred HhccCCCCchHHHH
Q 001059 658 LQDALPPQMEYELL 671 (1170)
Q Consensus 658 L~~~~~~~~~~~~~ 671 (1170)
++||||....++.+
T Consensus 443 l~HpfF~~i~w~~l 456 (576)
T 2acx_A 443 KEHPLFKKLNFKRL 456 (576)
T ss_dssp HTSGGGTTCCHHHH
T ss_pred HhChhhccCCHHHH
Confidence 99999999887644
No 121
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.8e-39 Score=373.84 Aligned_cols=273 Identities=25% Similarity=0.371 Sum_probs=212.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|++..+|+.||||++... ........+.+|+.+++.++||||+++++++....
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 82 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDS----- 82 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC-----
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccc-----
Confidence 457999999999999999999999999999999999643 33445567889999999999999999998863210
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
......+|++|||++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 83 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~ 131 (353)
T 2b9h_A 83 ------------------------------FENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGS 131 (353)
T ss_dssp ------------------------------STTCCCEEEEECCCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cCccceEEEEEeccCccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 112356899999999999998876 5699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++........... ...........+||+.|+|||++.+...++.++||
T Consensus 132 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~-----~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di 206 (353)
T 2b9h_A 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE-----PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDV 206 (353)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCCTTCEECC---------------------CCCCCCGGGCCHHHHHSCCCCCHHHHH
T ss_pred CeecCCCCHHHeEEcCCCcEEEEecccccccccccccccC-----ccccccchhhccccccccCCeeeccCCCccchhhH
Confidence 9999999999999999999999999999876432211000 00000112345899999999998765678999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC------------------------CC-----CccccCCHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------------LP-----PSWVAKFSEQESLL 640 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~------------------------~p-----~~~~~~~~e~~~LI 640 (1170)
|||||++|+|++ ||...........+....+. .+ ..+...++++.+||
T Consensus 207 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 286 (353)
T 2b9h_A 207 WSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLL 286 (353)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHH
Confidence 999999999996 77765544333322211111 00 11235678899999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.+||+.||.+|||+.++++|||+....
T Consensus 287 ~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 287 QRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp HHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HHhcCcCcccCCCHHHHhcCccccccC
Confidence 999999999999999999999998754
No 122
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.2e-39 Score=375.39 Aligned_cols=256 Identities=25% Similarity=0.374 Sum_probs=205.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHH-HHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~i-L~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++++.||+|+||+||+|+++.+|+.||||+++...... ...++.+|..+ ++.++||||++++++|.+
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~----- 121 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFR----- 121 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH-HHHHHHHHHHHHHTTCCCTTTCCEEEEEEC-----
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH-HHHHHHHHHHHHHhhcCCCcEEEEeeEEEe-----
Confidence 34578999999999999999999999999999999997654443 34455566655 778899999999998843
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+++|.+++. ....+++..++.++.||+.||
T Consensus 122 -----------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l 166 (340)
T 3an0_A 122 -----------------------------------EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 166 (340)
T ss_dssp -----------------------------------SSCEEEEECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCcEEEEHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 34579999999999988876 346799999999999999999
Q ss_pred HHHHhC-CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC---
Q 001059 507 AHIHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--- 582 (1170)
Q Consensus 507 ~yLHs~-gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--- 582 (1170)
+|||++ ||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+
T Consensus 167 ~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~ 230 (340)
T 3an0_A 167 EHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV----------------AKTIDAGCKPYMAPERINPELN 230 (340)
T ss_dssp HHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHH----------------HHHHSSCCCCCCCHHHHSCCTT
T ss_pred HHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceeccccc----------------ccccCCCCccccCccccccccc
Confidence 999997 99999999999999999999999999998763221 1123479999999999753
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhH-HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
...++.++|||||||++|||++ ||..... ......... ...........++++.+||.+||+.||.+|||+.+++
T Consensus 231 ~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 309 (340)
T 3an0_A 231 QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 309 (340)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH-SCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred cCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhc-CCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHh
Confidence 2358999999999999999997 7765322 222222222 2222222345678999999999999999999999999
Q ss_pred hccCCCC
Q 001059 659 QDALPPQ 665 (1170)
Q Consensus 659 ~~~~~~~ 665 (1170)
+||||..
T Consensus 310 ~hp~f~~ 316 (340)
T 3an0_A 310 QHPFFTL 316 (340)
T ss_dssp TSHHHHH
T ss_pred cCcCccc
Confidence 9998754
No 123
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.2e-39 Score=369.31 Aligned_cols=256 Identities=23% Similarity=0.398 Sum_probs=211.6
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
....++|++.+.||+|+||+||+|+++.+|+.||+|+++.... .....+.+|+.+++.++||||++++++|.+
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 77 (304)
T 2jam_A 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYES----- 77 (304)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhccc-----
Confidence 3456789999999999999999999999999999999975432 233568899999999999999999988732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++||||+ ++|.+++...+.+++..++.++.||+.||+||
T Consensus 78 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~l 122 (304)
T 2jam_A 78 -----------------------------------TTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYL 122 (304)
T ss_dssp -----------------------------------SSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999996 59999998888899999999999999999999
Q ss_pred HhCCccccCCCCCceee---cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 510 HGQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi---~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
|++||+||||||+|||+ +.++.+||+|||++...... ......||+.|+|||++.+ ..+
T Consensus 123 H~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~ 184 (304)
T 2jam_A 123 HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-----------------IMSTACGTPGYVAPEVLAQ-KPY 184 (304)
T ss_dssp HHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-----------------TTHHHHSCCCBCCTTTBSS-CSC
T ss_pred HHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-----------------ccccccCCCCccChHHhcc-CCC
Confidence 99999999999999999 77889999999998753211 1133579999999999987 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
+.++|||||||++|+|++ ||...........+.......+ +.+...++++.+||.+||+.||.+|||+.++++|||
T Consensus 185 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (304)
T 2jam_A 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPW 264 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence 999999999999999997 7776655554444443333332 334567789999999999999999999999999998
Q ss_pred CCCc
Q 001059 663 PPQM 666 (1170)
Q Consensus 663 ~~~~ 666 (1170)
+...
T Consensus 265 ~~~~ 268 (304)
T 2jam_A 265 IDGN 268 (304)
T ss_dssp HHSS
T ss_pred ccCC
Confidence 7653
No 124
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.7e-40 Score=378.41 Aligned_cols=264 Identities=25% Similarity=0.387 Sum_probs=211.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC---CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~---~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..++|++.+.||+|+||+||+|.++.+++.||+|++.... ......+.+.+|+.+++.++||||++++++|.+
T Consensus 24 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---- 99 (345)
T 3hko_A 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED---- 99 (345)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred hhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc----
Confidence 3578999999999999999999999999999999996532 233455789999999999999999999998832
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc---------------------
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------------------- 487 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------------------- 487 (1170)
...+|+|||||+ ++|.+++...
T Consensus 100 ------------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 143 (345)
T 3hko_A 100 ------------------------------------EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP 143 (345)
T ss_dssp ------------------------------------SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSH
T ss_pred ------------------------------------CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccc
Confidence 457899999996 6999988521
Q ss_pred -------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCC--CEEEeecCcchhcccc
Q 001059 488 -------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGDFGLAKFLKLE 546 (1170)
Q Consensus 488 -------------------~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~--~vKL~DFGlA~~~~~~ 546 (1170)
..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.+...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~ 223 (345)
T 3hko_A 144 ECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKL 223 (345)
T ss_dssp HHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGT
T ss_pred cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeecccccccccc
Confidence 1136778899999999999999999999999999999998776 8999999999865322
Q ss_pred ccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc
Q 001059 547 QLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK 622 (1170)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~ 622 (1170)
... .........||+.|+|||++.+. ..++.++|||||||++|||++ ||......+.........
T Consensus 224 ~~~-----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 292 (345)
T 3hko_A 224 NNG-----------EYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKK 292 (345)
T ss_dssp TCC-------------------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC
T ss_pred Ccc-----------ccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcc
Confidence 100 01122456799999999998752 468999999999999999997 887766666665555544
Q ss_pred CCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 623 GELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 623 ~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
...+ +.+...++++.+||.+||+.||.+|||+.++|+|||+.+..
T Consensus 293 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~ 338 (345)
T 3hko_A 293 LCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS 338 (345)
T ss_dssp CCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred cccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence 4333 34456788999999999999999999999999999987654
No 125
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.4e-39 Score=377.80 Aligned_cols=258 Identities=22% Similarity=0.448 Sum_probs=214.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--h----hhHHHHHHHHHHHHhc-cCCCceeEEEEEe
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--L----PVNDRILREVATLSRL-QHQHVVRYYQAWF 424 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~--~----~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~ 424 (1170)
.+.++|++.+.||+|+||.||+|+++.+|+.||||+++..... . ...+.+.+|+.+++.+ +||||++++++|.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 3457899999999999999999999999999999999765422 1 1245678999999999 8999999999873
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~ 503 (1170)
. ...+|+|||||+| +|.+++.....+++..++.++.||+
T Consensus 171 ~----------------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~ 210 (365)
T 2y7j_A 171 S----------------------------------------SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLL 210 (365)
T ss_dssp B----------------------------------------SSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred e----------------------------------------CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 2 3578999999975 9999998888899999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
.||.|||++||+||||||+|||++.++.+||+|||++..+.... .....+||+.|+|||++.+.
T Consensus 211 ~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~ 274 (365)
T 2y7j_A 211 EAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----------------KLRELCGTPGYLAPEILKCS 274 (365)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHHHT
T ss_pred HHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCc----------------ccccCCCCCCccChhhcccc
Confidence 99999999999999999999999999999999999998653211 12345899999999998632
Q ss_pred -----CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 584 -----PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 584 -----~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
..++.++|||||||++|+|++ ||...........+.......+ +.+...++++.+||++||+.||.+|||+
T Consensus 275 ~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~ 354 (365)
T 2y7j_A 275 MDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTA 354 (365)
T ss_dssp TCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred ccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCH
Confidence 347899999999999999997 7876555544444433333332 3456778899999999999999999999
Q ss_pred HHHHhccCCCC
Q 001059 655 TELLQDALPPQ 665 (1170)
Q Consensus 655 ~eiL~~~~~~~ 665 (1170)
.++++||||.+
T Consensus 355 ~ell~hp~f~r 365 (365)
T 2y7j_A 355 EQALQHPFFER 365 (365)
T ss_dssp HHHHHSGGGCC
T ss_pred HHHhcCcccCC
Confidence 99999999863
No 126
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.5e-39 Score=363.88 Aligned_cols=256 Identities=24% Similarity=0.395 Sum_probs=211.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----hhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++.+.||+|+||.||+|+++.+|+.||+|+++...... ...+.+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 79 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN---- 79 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC----
Confidence 467999999999999999999999999999999997654321 135678999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+||||++ ++|.+++.....+++..++.++.||+.||+|
T Consensus 80 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~ 123 (283)
T 3bhy_A 80 ------------------------------------KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 123 (283)
T ss_dssp ------------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999996 6999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCC----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
||++||+||||||+||+++.++ .+||+|||++....... ......||+.|+|||++.+ .
T Consensus 124 lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~ 186 (283)
T 3bhy_A 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN----------------EFKNIFGTPEFVAPEIVNY-E 186 (283)
T ss_dssp HHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC------------------------CCCGGGCCHHHHTT-C
T ss_pred HHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCC----------------cccccCCCcCccCcceecC-C
Confidence 9999999999999999998877 89999999998643211 1133579999999999987 5
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++.++||||||+++|+|++ ||......+............+. .+...++.+.+||++||+.||.+|||+.++++|
T Consensus 187 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 187 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred CCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 68999999999999999997 77766555544444333333332 335667889999999999999999999999999
Q ss_pred cCCCCc
Q 001059 661 ALPPQM 666 (1170)
Q Consensus 661 ~~~~~~ 666 (1170)
+|+...
T Consensus 267 ~~~~~~ 272 (283)
T 3bhy_A 267 SWIKAI 272 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987654
No 127
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=380.48 Aligned_cols=255 Identities=25% Similarity=0.379 Sum_probs=207.9
Q ss_pred CCceE--EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 355 NDFEE--LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 355 ~~y~~--~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+.|.+ .+.||+|+||.||+|.+..+|+.||+|+++... ....+.+.+|+.+|++++||||++++++|.+
T Consensus 87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------- 157 (373)
T 2x4f_A 87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFES------- 157 (373)
T ss_dssp GTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------
T ss_pred cceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------
Confidence 34444 678999999999999999999999999997532 2345679999999999999999999998732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 158 ---------------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH 204 (373)
T 2x4f_A 158 ---------------------------------KNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH 204 (373)
T ss_dssp ---------------------------------SSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999997 5898887654 46999999999999999999999
Q ss_pred hCCccccCCCCCceee--cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 511 GQGIIHRDLTPNNIFF--DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi--~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
++||+||||||+|||+ +.++.+||+|||+++...... .....+||+.|+|||++.+ ..++.
T Consensus 205 ~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~~ 267 (373)
T 2x4f_A 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE----------------KLKVNFGTPEFLAPEVVNY-DFVSF 267 (373)
T ss_dssp HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC----------------BCCCCCSSCTTCCHHHHTT-CBCCH
T ss_pred HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc----------------ccccccCCCcEeChhhccC-CCCCc
Confidence 9999999999999999 567889999999998653211 1233579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
++|||||||++|||++ ||......+....+......++ ..+...++++.+||.+||+.||.+|||+.++|+||||.
T Consensus 268 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~ 347 (373)
T 2x4f_A 268 PTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347 (373)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred HHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcC
Confidence 9999999999999997 8877766666655555444443 34566788999999999999999999999999999998
Q ss_pred CchH
Q 001059 665 QMEY 668 (1170)
Q Consensus 665 ~~~~ 668 (1170)
....
T Consensus 348 ~~~~ 351 (373)
T 2x4f_A 348 DHKL 351 (373)
T ss_dssp CHHH
T ss_pred CCch
Confidence 7653
No 128
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=375.96 Aligned_cols=259 Identities=25% Similarity=0.409 Sum_probs=209.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|.+.+.||+|+||.||+|+++.+|+.||||++............+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----- 97 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS----- 97 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS-----
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccc-----
Confidence 478999999999999999999999999999999997655555556788999999999999999999998743210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
......+|++|||++++|.+++.. .+++..++.++.||+.||+|||++|
T Consensus 98 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ 146 (353)
T 3coi_A 98 -----------------------------LRNFYDFYLVMPFMQTDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAG 146 (353)
T ss_dssp -----------------------------GGGCCCCEEEEECCSEEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------------cccceeEEEEeccccCCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 011234699999999998887643 5999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||+++..... .+..+||+.|+|||++.+...++.++|||
T Consensus 147 ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~ 208 (353)
T 3coi_A 147 VVHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIW 208 (353)
T ss_dssp CCCSSCCGGGEEECTTCCEEECSTTCTTC--------------------------CCSBCCSCHHHHSCCSCCCTTHHHH
T ss_pred cccCCCCHHHEeECCCCcEEEeecccccCCCCC------------------ccccccCcCcCCHHHHhCcCCCCchhhHH
Confidence 999999999999999999999999999754211 13457899999999998756789999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC----------------------------CCCCccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------------------ELPPSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~----------------------------~~p~~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||......+....+....+ .++..+...++++.+||.+
T Consensus 209 slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 288 (353)
T 3coi_A 209 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEK 288 (353)
T ss_dssp HHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHH
Confidence 99999999997 7776544433332222111 1122334567899999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCc
Q 001059 643 LMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||+.||.+|||+.++++||||...
T Consensus 289 ~L~~dp~~Rpt~~e~l~hp~f~~~ 312 (353)
T 3coi_A 289 MLELDVDKRLTAAQALTHPFFEPF 312 (353)
T ss_dssp HSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HcCCCcccCCCHHHHhcCcchhhc
Confidence 999999999999999999999765
No 129
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.5e-39 Score=383.56 Aligned_cols=258 Identities=26% Similarity=0.378 Sum_probs=206.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
...+|++.+.||+|+||+||+|++..+++ ||+|++...... ..+|+.+|+.++||||++++++|...+.
T Consensus 38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~---- 106 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGD---- 106 (394)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESS----
T ss_pred ccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCC----
Confidence 45689999999999999999999986665 888887543221 2379999999999999999999865320
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.....++|+|||||++++...+. ....+++..++.++.||+.||+|
T Consensus 107 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~ 156 (394)
T 4e7w_A 107 ------------------------------KKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156 (394)
T ss_dssp ------------------------------SSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 12346789999999987766554 35679999999999999999999
Q ss_pred HHhCCccccCCCCCceeec-CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
||++||+||||||+|||++ .++.+||+|||+|+...... .....+||+.|+|||++.+...|+
T Consensus 157 LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~ 220 (394)
T 4e7w_A 157 IHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE----------------PNVSYICSRYYRAPELIFGATNYT 220 (394)
T ss_dssp HHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC----------------CCCSSCSCGGGCCHHHHTTCSSCC
T ss_pred HHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC----------------CCcccccCcCccCHHHHcCCCCCC
Confidence 9999999999999999999 78999999999998653211 123467899999999998766799
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-----------------CCC---------ccccCCHHHHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------LPP---------SWVAKFSEQES 638 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-----------------~p~---------~~~~~~~e~~~ 638 (1170)
.++|||||||++|||++ ||...........+....+. +|. .....++++.+
T Consensus 221 ~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (394)
T 4e7w_A 221 TNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAID 300 (394)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHH
Confidence 99999999999999997 88776655544443332111 110 01236679999
Q ss_pred HHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 639 LLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 639 LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||.+||+.||.+|||+.++++||||....
T Consensus 301 li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 301 LISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp HHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred HHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 99999999999999999999999998764
No 130
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.1e-39 Score=368.10 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=199.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|++ +|+.||||++..........+.+.+|+.+|++++||||++++++|..
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------- 105 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ-------- 105 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--------
Confidence 47899999999999999999987 48999999998766666666789999999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+ ++|.+++..... +++..++.++.||+.||+||
T Consensus 106 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L 153 (309)
T 3p86_A 106 --------------------------------PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153 (309)
T ss_dssp --------------------------------TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999996 599999986553 99999999999999999999
Q ss_pred HhCC--ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 510 HGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 510 Hs~g--IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|++| |+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++
T Consensus 154 H~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~ 217 (309)
T 3p86_A 154 HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF---------------LSSKSAAGTPEWMAPEVLRD-EPSN 217 (309)
T ss_dssp HTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------------------------------CCTTSCHHHHTT-CCCC
T ss_pred HcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc---------------cccccCCCCccccChhhhcC-CCCC
Confidence 9999 9999999999999999999999999998543211 11234579999999999988 5689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||......+....... ....+......++++.+||.+||+.||.+|||+.++++.
T Consensus 218 ~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~ 292 (309)
T 3p86_A 218 EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF-KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDL 292 (309)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHH-SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999997 8876665554443322 233333344667899999999999999999999999873
No 131
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.2e-39 Score=385.09 Aligned_cols=256 Identities=27% Similarity=0.391 Sum_probs=201.3
Q ss_pred CccccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHh-ccCCCceeEEEEEeecC
Q 001059 350 SSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR-LQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 350 ~~~~~~~y~~~-~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~-l~HpnIV~l~~~~~e~~ 427 (1170)
.....++|.+. +.||+|+||+||+|+++.+|+.||||+++. ...+.+|+.++.+ .+||||++++++|...
T Consensus 56 ~~~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~- 127 (400)
T 1nxk_A 56 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENL- 127 (400)
T ss_dssp CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-
T ss_pred CCcccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------chhHHHHHHHHHHhcCCCCcceEeEEEeec-
Confidence 44567889987 689999999999999999999999999862 2357789988744 5899999999987431
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVE 504 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~ 504 (1170)
.....++|+|||||+ |+|.+++.... .+++..++.++.||+.
T Consensus 128 -----------------------------------~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~ 172 (400)
T 1nxk_A 128 -----------------------------------YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172 (400)
T ss_dssp -----------------------------------ETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHH
T ss_pred -----------------------------------ccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 012467899999997 59999998653 5999999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
||+|||++||+||||||+|||++. ++.+||+|||+++...... ..+..+||+.|+|||++.
T Consensus 173 aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 236 (400)
T 1nxk_A 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN----------------SLTTPCYTPYYVAPEVLG 236 (400)
T ss_dssp HHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---------------------------CTTCCGGGSC
T ss_pred HHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCC----------------ccccCCCCCCccCHhhcC
Confidence 999999999999999999999997 7899999999998542111 124568999999999998
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHH----HHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQ----IVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~----~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
+ ..|+.++|||||||++|||++ ||....... ....+......++ +.+...++++.+||++||+.||.+|||
T Consensus 237 ~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt 315 (400)
T 1nxk_A 237 P-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT 315 (400)
T ss_dssp C-CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred C-CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcC
Confidence 7 579999999999999999997 776443211 1112222223333 345677889999999999999999999
Q ss_pred HHHHHhccCCCC
Q 001059 654 ATELLQDALPPQ 665 (1170)
Q Consensus 654 a~eiL~~~~~~~ 665 (1170)
+.++++|+|+.+
T Consensus 316 ~~eil~hp~~~~ 327 (400)
T 1nxk_A 316 ITEFMNHPWIMQ 327 (400)
T ss_dssp HHHHHHSHHHHT
T ss_pred HHHHhcCccccC
Confidence 999999999864
No 132
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=369.14 Aligned_cols=278 Identities=26% Similarity=0.378 Sum_probs=210.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.....++|++++.||+|+||.||+|.+..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (320)
T 2i6l_A 6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQ 83 (320)
T ss_dssp CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCB
T ss_pred cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccc
Confidence 445568999999999999999999999999999999998743 344567889999999999999999999987433100
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
.............+|+||||++++|.+++.. +.+++..++.++.||+.||+||
T Consensus 84 --------------------------~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~l 136 (320)
T 2i6l_A 84 --------------------------LTDDVGSLTELNSVYIVQEYMETDLANVLEQ-GPLLEEHARLFMYQLLRGLKYI 136 (320)
T ss_dssp --------------------------CCC----CCSCSEEEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------cccccccccccCceeEEeeccCCCHHHHhhc-CCccHHHHHHHHHHHHHHHHHH
Confidence 0000011124568899999999999998864 5699999999999999999999
Q ss_pred HhCCccccCCCCCceeec-CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 510 HGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
|++||+||||||+|||++ .++.+||+|||+++........ ........||+.|+|||++.+...++.
T Consensus 137 H~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 204 (320)
T 2i6l_A 137 HSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH------------KGHLSEGLVTKWYRSPRLLLSPNNYTK 204 (320)
T ss_dssp HHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------------------CCCGGGSCCTTCCHHHHHCTTCCCH
T ss_pred HhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCccc------------ccccccccccccccCcHHhcCcccCCc
Confidence 999999999999999997 5679999999999865321100 011234578999999999876567899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC----------------------C-----CccccCCHHHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------P-----PSWVAKFSEQES 638 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~----------------------p-----~~~~~~~~e~~~ 638 (1170)
++|||||||++|||++ ||......+............ + ..+...++++.+
T Consensus 205 ~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
T 2i6l_A 205 AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVD 284 (320)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHH
T ss_pred hhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHH
Confidence 9999999999999997 787665544433332211110 0 112346789999
Q ss_pred HHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 639 LLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 639 LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
||++||+.||.+|||+.++++||||....+
T Consensus 285 li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 314 (320)
T 2i6l_A 285 FLEQILTFSPMDRLTAEEALSHPYMSIYSF 314 (320)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSHHHHTTCC
T ss_pred HHHHHcCCCccccCCHHHHhCCcccccccC
Confidence 999999999999999999999999876653
No 133
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.5e-39 Score=381.36 Aligned_cols=257 Identities=21% Similarity=0.314 Sum_probs=205.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc--------CCCceeEEEE
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ--------HQHVVRYYQA 422 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~--------HpnIV~l~~~ 422 (1170)
..+.++|++.+.||+|+||+||+|++..+|+.||||+++. .......+.+|+.+|+.++ ||||++++++
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~ 109 (397)
T 1wak_A 33 DLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS---AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDD 109 (397)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEE
T ss_pred hhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec---CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecc
Confidence 4456889999999999999999999999999999999863 2344567899999999996 7889999998
Q ss_pred EeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHH
Q 001059 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFR 500 (1170)
Q Consensus 423 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~ 500 (1170)
|...+ .....+|+|||||+++|.+.+... ..+++..++.++.
T Consensus 110 ~~~~~------------------------------------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 153 (397)
T 1wak_A 110 FKISG------------------------------------VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQ 153 (397)
T ss_dssp EEEEE------------------------------------TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred eeecC------------------------------------CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHH
Confidence 85321 134678999999999888877654 4699999999999
Q ss_pred HHHHHHHHHHhC-CccccCCCCCceeecCCC-------------------------------------------------
Q 001059 501 QIVEGLAHIHGQ-GIIHRDLTPNNIFFDARN------------------------------------------------- 530 (1170)
Q Consensus 501 qI~~gL~yLHs~-gIiHrDLKp~NILi~~~~------------------------------------------------- 530 (1170)
||+.||+|||++ ||+||||||+|||++.++
T Consensus 154 qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (397)
T 1wak_A 154 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKL 233 (397)
T ss_dssp HHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGC
T ss_pred HHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccccccccccccccc
Confidence 999999999998 999999999999999775
Q ss_pred CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCC
Q 001059 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFS 607 (1170)
Q Consensus 531 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~ 607 (1170)
.+||+|||+|+..... .+..+||+.|+|||++.+ ..++.++|||||||++|||++ ||.
T Consensus 234 ~~kl~DfG~a~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~ 294 (397)
T 1wak_A 234 KVKIADLGNACWVHKH------------------FTEDIQTRQYRSLEVLIG-SGYNTPADIWSTACMAFELATGDYLFE 294 (397)
T ss_dssp CEEECCGGGCEETTBC------------------SCSCCSCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ceEecccccccccccc------------------CccCCCCCcccCChhhcC-CCCCcHHHHHHHHHHHHHHhhCCCCCC
Confidence 7999999999864311 234579999999999988 568999999999999999997 775
Q ss_pred chh------HHHHHHHHhhhcCCCCCc---------------------------------------cccCCHHHHHHHHH
Q 001059 608 TAM------ERQIVLSDLKQKGELPPS---------------------------------------WVAKFSEQESLLRR 642 (1170)
Q Consensus 608 ~~~------~~~~~~~~l~~~~~~p~~---------------------------------------~~~~~~e~~~LI~~ 642 (1170)
... ............+..|.. ....++++.+||.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 374 (397)
T 1wak_A 295 PHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLP 374 (397)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGG
T ss_pred CCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHH
Confidence 432 111211111111111110 11223467899999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCC
Q 001059 643 LMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
||+.||.+|||+.++|+||||.+
T Consensus 375 ~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 375 MLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp GGCSSGGGSCCHHHHHTSGGGGC
T ss_pred HhccChhhcCCHHHHhhCccccC
Confidence 99999999999999999999863
No 134
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.3e-39 Score=397.26 Aligned_cols=260 Identities=28% Similarity=0.416 Sum_probs=214.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++++.||+|+||+||+|+++.+|+.||||++...... ......+.+|+.+|+.++||||++++++|..
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~------ 256 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET------ 256 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee------
Confidence 357899999999999999999999999999999999753211 1224578899999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ |+|.+++... ..+++..++.++.||+.||
T Consensus 257 ----------------------------------~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL 302 (543)
T 3c4z_A 257 ----------------------------------KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302 (543)
T ss_dssp ----------------------------------SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHH
Confidence 457899999997 5999988754 3699999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++++||+|||+++.+.... ......+||+.|+|||++.+ ..|
T Consensus 303 ~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~---------------~~~~~~~GT~~Y~APE~l~~-~~~ 366 (543)
T 3c4z_A 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ---------------TKTKGYAGTPGFMAPELLLG-EEY 366 (543)
T ss_dssp HHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC---------------CCBCCCCSCTTTSCHHHHTT-CCB
T ss_pred HHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC---------------cccccccCCccccChhhhcC-CCC
Confidence 99999999999999999999999999999999998653211 01234589999999999988 579
Q ss_pred CccchhHHHHHHHHHhhc---CCCchh----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----H
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----A 654 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a 654 (1170)
+.++|||||||++|||++ ||.... ..+....+......+| ...++++.+||++||+.||.+||+ +
T Consensus 367 ~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~~a 443 (543)
T 3c4z_A 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP---DKFSPASKDFCEALLQKDPEKRLGFRDGSC 443 (543)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCCBTTBS
T ss_pred ChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC---cccCHHHHHHHHHhccCCHhHCCCCcccCH
Confidence 999999999999999997 886542 2333333333333333 356789999999999999999995 5
Q ss_pred HHHHhccCCCCchHHHH
Q 001059 655 TELLQDALPPQMEYELL 671 (1170)
Q Consensus 655 ~eiL~~~~~~~~~~~~~ 671 (1170)
+++++||||....+..+
T Consensus 444 ~ei~~Hpff~~i~w~~l 460 (543)
T 3c4z_A 444 DGLRTHPLFRDISWRQL 460 (543)
T ss_dssp HHHHTSGGGTTCCHHHH
T ss_pred HHHHcCccccCCCHHHH
Confidence 89999999999987644
No 135
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.2e-39 Score=361.88 Aligned_cols=257 Identities=29% Similarity=0.531 Sum_probs=213.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|+++.+|+.||+|++..........+.+.+|+.++++++||||++++++|...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 77 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR------- 77 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG-------
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC-------
Confidence 5799999999999999999999999999999999987666666677899999999999999999999987542
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc----CCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY----DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~----~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|+|||||++ +|.+++... ..+++..++.++.||+.||+|
T Consensus 78 -------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~ 126 (279)
T 2w5a_A 78 -------------------------------TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126 (279)
T ss_dssp -------------------------------GGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 24578999999975 999988653 349999999999999999999
Q ss_pred HHhCC-----ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 509 IHGQG-----IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 509 LHs~g-----IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
||++| |+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+
T Consensus 127 lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~- 190 (279)
T 2w5a_A 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------SFAKTFVGTPYYMSPEQMNR- 190 (279)
T ss_dssp HHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C---------------HHHHHHHSCCTTCCHHHHHC-
T ss_pred HhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc---------------ccccccCCCccccChHHhcc-
Confidence 99999 9999999999999999999999999998753211 00123478999999999987
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
..++.++||||||+++|+|++ ||......+....... +..+......++++.++|.+||+.||.+|||+.++++|
T Consensus 191 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 268 (279)
T 2w5a_A 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268 (279)
T ss_dssp C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh--cccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 568999999999999999997 7776555444333322 33333334567899999999999999999999999999
Q ss_pred cCCCCc
Q 001059 661 ALPPQM 666 (1170)
Q Consensus 661 ~~~~~~ 666 (1170)
+|+..-
T Consensus 269 ~~~~~~ 274 (279)
T 2w5a_A 269 PLILEH 274 (279)
T ss_dssp TTCCGG
T ss_pred hhhhhh
Confidence 998754
No 136
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.4e-40 Score=390.46 Aligned_cols=259 Identities=23% Similarity=0.353 Sum_probs=202.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------hhhHHHHHHHHHHHHhccCCCceeEEEEEee
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------LPVNDRILREVATLSRLQHQHVVRYYQAWFE 425 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~------~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e 425 (1170)
...++|.+.+.||+|+||+||+|.++.+++.||||++...... ......+.+|+.+|++++||||++++++|.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 3457899999999999999999999999999999999754311 111235789999999999999999998762
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVE 504 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~ 504 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.
T Consensus 211 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~ 250 (419)
T 3i6u_A 211 ----------------------------------------AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250 (419)
T ss_dssp ----------------------------------------SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHH
T ss_pred ----------------------------------------cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 234689999996 599999888888999999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
||+|||++||+||||||+|||++.+ +.+||+|||+|+...... .....+||+.|+|||++.
T Consensus 251 ~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 314 (419)
T 3i6u_A 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----------------LMRTLCGTPTYLAPEVLV 314 (419)
T ss_dssp HHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC---------------------------CTTCCTTTTC
T ss_pred HHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCc----------------cccccCCCCCccCceeee
Confidence 9999999999999999999999754 459999999998653211 123468999999999986
Q ss_pred C--CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhh-hcCC-CCCccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 582 G--WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 582 ~--~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~-~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
+ ...|+.++|||||||++|+|++ ||............+. .... .+..+...++.+.+||++||+.||.+|||+
T Consensus 315 ~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~ 394 (419)
T 3i6u_A 315 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 394 (419)
T ss_dssp ----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred cCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCH
Confidence 3 2457899999999999999997 7764432222222222 1222 233456678899999999999999999999
Q ss_pred HHHHhccCCCCch
Q 001059 655 TELLQDALPPQME 667 (1170)
Q Consensus 655 ~eiL~~~~~~~~~ 667 (1170)
.++|+||||....
T Consensus 395 ~e~l~hp~~~~~~ 407 (419)
T 3i6u_A 395 EEALRHPWLQDED 407 (419)
T ss_dssp HHHHHSGGGCCHH
T ss_pred HHHhCCcccCChh
Confidence 9999999998764
No 137
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.4e-39 Score=364.77 Aligned_cols=254 Identities=28% Similarity=0.424 Sum_probs=204.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++++.||+|+||.||+|++..+|+.||+|++..... .......+.+|+.+++.++||||+++++++.
T Consensus 8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~------ 81 (294)
T 4eqm_A 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE------ 81 (294)
T ss_dssp CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE------
T ss_pred HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee------
Confidence 445789999999999999999999999999999999875443 3345578899999999999999999998873
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+|+|||||+| +|.+++...+.+++..++.++.||+.||+||
T Consensus 82 ----------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~l 127 (294)
T 4eqm_A 82 ----------------------------------EDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127 (294)
T ss_dssp ----------------------------------CSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------eCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 24578999999975 9999999888999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++....... ......+||+.|+|||++.+ ..++.+
T Consensus 128 H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 192 (294)
T 4eqm_A 128 HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL--------------TQTNHVLGTVQYFSPEQAKG-EATDEC 192 (294)
T ss_dssp HHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---------------------------CCSSCCHHHHHT-CCCCTT
T ss_pred HHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc--------------cccCccccCccccCHhHhcC-CCCCch
Confidence 999999999999999999999999999999986532210 11234579999999999988 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC--CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p--~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|+|++ ||............+....... ......++.+.++|.+||+.||.+||+..+.+.+
T Consensus 193 ~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~ 268 (294)
T 4eqm_A 193 TDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKD 268 (294)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHH
T ss_pred HhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHH
Confidence 999999999999997 8877666555544443222111 1234567789999999999999999954444443
No 138
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.6e-39 Score=377.69 Aligned_cols=255 Identities=24% Similarity=0.390 Sum_probs=209.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|++..+|+.||+|++... ........+.+|+.+|+.++||||++++++|..
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 102 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 102 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE--------
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE--------
Confidence 47899999999999999999999999999999999754 344556789999999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||++ +|.+++.....+++..++.++.||+.||+|||++
T Consensus 103 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~ 150 (360)
T 3eqc_A 103 --------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150 (360)
T ss_dssp --------------------------------TTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3568999999975 9999999888999999999999999999999996
Q ss_pred -CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 -gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
||+||||||+|||++.++.+||+|||+++...... .....||+.|+|||++.+ ..++.++|
T Consensus 151 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----------------~~~~~gt~~y~aPE~~~~-~~~~~~~D 212 (360)
T 3eqc_A 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----------------ANSFVGTRSYMSPERLQG-THYSVQSD 212 (360)
T ss_dssp HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---------------------CCCCTTCCHHHHTT-CCCSHHHH
T ss_pred CCEEcCCccHHHEEECCCCCEEEEECCCCccccccc-----------------ccCCCCCCCeECHHHHcC-CCCCchhh
Confidence 99999999999999999999999999998653221 134579999999999988 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHH-----------------------------------------HhhhcCCCCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLS-----------------------------------------DLKQKGELPP 627 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~-----------------------------------------~l~~~~~~p~ 627 (1170)
||||||++|+|++ ||......+.... .+........
T Consensus 213 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (360)
T 3eqc_A 213 IWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKL 292 (360)
T ss_dssp HHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCC
Confidence 9999999999996 7765433222111 0111111111
Q ss_pred ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 628 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 628 ~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.....++++.+||++||+.||.+|||+.++|+||||.+..
T Consensus 293 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 332 (360)
T 3eqc_A 293 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 332 (360)
T ss_dssp CTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred CcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence 1223567899999999999999999999999999987654
No 139
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.9e-39 Score=363.92 Aligned_cols=252 Identities=24% Similarity=0.469 Sum_probs=212.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++.+.||+|+||.||+|++..+++.||||++..... .......+.+|+.+++.++||||+++++++.+
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 85 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD------ 85 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc------
Confidence 45899999999999999999999999999999999964321 11224578899999999999999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||+++ +|.+++.....+++..++.++.||+.||+|||
T Consensus 86 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH 131 (284)
T 2vgo_A 86 ----------------------------------RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131 (284)
T ss_dssp ----------------------------------SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3578999999974 99999988888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++...... ......||+.|+|||++.+ ..++.++
T Consensus 132 ~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 193 (284)
T 2vgo_A 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-----------------RRRTMCGTLDYLPPEMIEG-KTHDEKV 193 (284)
T ss_dssp TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-----------------CBCCCCSCGGGCCHHHHTT-CCBCTTH
T ss_pred HCCceecCCCHHHEEEcCCCCEEEecccccccCccc-----------------ccccccCCCCcCCHHHhcc-CCCCccc
Confidence 999999999999999999999999999998653211 1134579999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
||||||+++|+|++ ||......+...........+|+ ..++++.++|.+||+.||.+|||+.++++|||+..
T Consensus 194 Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~ 268 (284)
T 2vgo_A 194 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP---FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268 (284)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred chhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCC---cCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence 99999999999996 78766555554444443333433 45679999999999999999999999999998753
No 140
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.7e-39 Score=363.40 Aligned_cols=259 Identities=26% Similarity=0.394 Sum_probs=209.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..+.|++++.||+|+||.||+|+++.+|+.||+|++.... ......+.+|+.+++.++||||+++++++..
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 87 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYH------- 87 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-------
Confidence 3578999999999999999999999999999999986543 2345678999999999999999999998743
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||++ +|.+++.. ...+++..++.++.||+.||.|||
T Consensus 88 ---------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 134 (302)
T 2j7t_A 88 ---------------------------------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 134 (302)
T ss_dssp ---------------------------------C-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh
Confidence 3467999999975 88888765 456999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc----CCCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ----GWPKI 586 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~----~~~~~ 586 (1170)
++||+||||||+|||++.++.+||+|||++........ ......||+.|+|||++. ....+
T Consensus 135 ~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 199 (302)
T 2j7t_A 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ---------------KRDSFIGTPYWMAPEVVMCETMKDTPY 199 (302)
T ss_dssp HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH---------------C-----CCGGGCCHHHHHHHHTTSTTT
T ss_pred cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc---------------ccccccCChhhcCCeeeccccCCCCCC
Confidence 99999999999999999999999999999875422110 113357999999999984 22568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+.++|||||||++|+|++ ||..........................++++.+||.+||+.||.+|||+.++++|||+
T Consensus 200 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~ 279 (302)
T 2j7t_A 200 DYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279 (302)
T ss_dssp TTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTT
T ss_pred chhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHH
Confidence 999999999999999997 77766555554444433332223345567899999999999999999999999999999
Q ss_pred CCchH
Q 001059 664 PQMEY 668 (1170)
Q Consensus 664 ~~~~~ 668 (1170)
.....
T Consensus 280 ~~~~~ 284 (302)
T 2j7t_A 280 SSITS 284 (302)
T ss_dssp TTCCC
T ss_pred hhhcc
Confidence 88753
No 141
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.4e-39 Score=373.47 Aligned_cols=262 Identities=24% Similarity=0.400 Sum_probs=215.3
Q ss_pred ccccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~-~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
..+.+.|.+. +.||+|+||+||+|+++.+|+.||||+++...........+.+|+.+++.+ +||||++++++|..
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~--- 100 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN--- 100 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe---
Confidence 3345667777 889999999999999999999999999986555545567899999999999 56999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh--cCCCCHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES--YDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~--~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||++ +|.+++.. ...+++..++.++.||+.|
T Consensus 101 -------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~ 143 (327)
T 3lm5_A 101 -------------------------------------TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEG 143 (327)
T ss_dssp -------------------------------------SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 4568999999975 89888854 3569999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
|+|||++||+||||||+|||++. ++.+||+|||+++...... .....+||+.|+|||++.+
T Consensus 144 L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~ 207 (327)
T 3lm5_A 144 VYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC----------------ELREIMGTPEYLAPEILNY 207 (327)
T ss_dssp HHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------------------------CCCGGGCCHHHHTT
T ss_pred HHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc----------------ccccccCCcCccCCeeecC
Confidence 99999999999999999999988 7899999999998653211 1234579999999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
..++.++|||||||++|+|++ ||......+....+.......+ +.+...++.+.+||.+||+.||.+|||++++|
T Consensus 208 -~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll 286 (327)
T 3lm5_A 208 -DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICL 286 (327)
T ss_dssp -CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred -CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 568999999999999999997 8877666655555444343333 34456778999999999999999999999999
Q ss_pred hccCCCCchHH
Q 001059 659 QDALPPQMEYE 669 (1170)
Q Consensus 659 ~~~~~~~~~~~ 669 (1170)
+|+|+.+..++
T Consensus 287 ~h~~~~~~~~~ 297 (327)
T 3lm5_A 287 SHSWLQQWDFE 297 (327)
T ss_dssp TCGGGCCCCTT
T ss_pred CCHhhcccccc
Confidence 99999887643
No 142
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=364.31 Aligned_cols=256 Identities=29% Similarity=0.476 Sum_probs=187.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+++|++.+.||+|+||.||+|++..+|+.||||++..... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 82 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED------ 82 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC------
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc------
Confidence 35789999999999999999999999999999999964321 11224678999999999999999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++||||+ ++|.+++... ..+++..++.++.||+.||+||
T Consensus 83 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l 128 (278)
T 3cok_A 83 ----------------------------------SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128 (278)
T ss_dssp ----------------------------------SSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 5899988765 5699999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.+
T Consensus 129 H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~ 192 (278)
T 3cok_A 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH---------------EKHYTLCGTPNYISPEIATR-SAHGLE 192 (278)
T ss_dssp HHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--------------------------------------------C
T ss_pred HHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC---------------CcceeccCCCCcCCcchhcC-CCCCch
Confidence 99999999999999999999999999999998653211 01123579999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+|||||||++|+|++ ||...................| ...++++.+||.+||+.||.+|||+.++++|||+.+.
T Consensus 193 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 269 (278)
T 3cok_A 193 SDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP---SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN 269 (278)
T ss_dssp THHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred hhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCc---cccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence 999999999999997 7765433332222222122222 3456799999999999999999999999999999875
Q ss_pred h
Q 001059 667 E 667 (1170)
Q Consensus 667 ~ 667 (1170)
.
T Consensus 270 ~ 270 (278)
T 3cok_A 270 S 270 (278)
T ss_dssp -
T ss_pred C
Confidence 4
No 143
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.6e-39 Score=376.84 Aligned_cols=265 Identities=24% Similarity=0.368 Sum_probs=201.9
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...+++|++.+.||+|+||+||+|+++.+|+.||||++..... ......+++..++.++||||++++++|...+.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~-- 93 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE-- 93 (360)
T ss_dssp HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT---CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS--
T ss_pred hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---ccHHHHHHHHHHHhcCCCCcccHHHhhhcccc--
Confidence 4457899999999999999999999999999999999864332 23456788888999999999999999865320
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qI~~gL 506 (1170)
......++|+|||||+++|...+. ....+++..++.++.||+.||
T Consensus 94 -------------------------------~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al 142 (360)
T 3e3p_A 94 -------------------------------RDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI 142 (360)
T ss_dssp -------------------------------SCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred -------------------------------ccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence 012345689999999998776554 455799999999999999999
Q ss_pred HHHH--hCCccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 507 AHIH--GQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 507 ~yLH--s~gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
.||| ++||+||||||+|||++. ++.+||+|||+++...... ......||+.|+|||++.+.
T Consensus 143 ~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~ 206 (360)
T 3e3p_A 143 GCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE----------------PNVAYICSRYYRAPELIFGN 206 (360)
T ss_dssp HHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS----------------CCCSTTSCGGGCCHHHHTTC
T ss_pred HHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC----------------CcccccCCcceeCHHHHcCC
Confidence 9999 999999999999999997 8999999999998653211 12345789999999999775
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-----------------------------Ccccc
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-----------------------------PSWVA 631 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-----------------------------~~~~~ 631 (1170)
..++.++|||||||++|||++ ||...........+....+..+ .....
T Consensus 207 ~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (360)
T 3e3p_A 207 QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLK 286 (360)
T ss_dssp SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCT
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhcc
Confidence 668999999999999999997 8876665554444433211111 11112
Q ss_pred CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 632 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 632 ~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.++++.+||.+||+.||.+|||+.++|+||||.+..
T Consensus 287 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 287 DAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp THHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred ccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 356899999999999999999999999999998764
No 144
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.8e-39 Score=366.75 Aligned_cols=263 Identities=25% Similarity=0.379 Sum_probs=211.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc-cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc---cCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNK-LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~-~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l---~HpnIV~l~~~~~e~~~ 428 (1170)
..++|++.+.||+|+||+||+|++. .+|+.||||+++...........+.+|+.+++.+ +||||++++++|....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~- 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR- 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE-
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc-
Confidence 4578999999999999999999995 6789999999975443322234566788877776 8999999999874320
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL 506 (1170)
......+|+||||++++|.+++.... .+++..++.++.||+.||
T Consensus 88 ----------------------------------~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l 133 (326)
T 1blx_A 88 ----------------------------------TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133 (326)
T ss_dssp ----------------------------------CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------cCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Confidence 01346789999999999999997654 499999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ ..+
T Consensus 134 ~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~ 196 (326)
T 1blx_A 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM----------------ALTSVVVTLWYRAPEVLLQ-SSY 196 (326)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG----------------GGCCCCCCCTTCCHHHHTT-CCC
T ss_pred HHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCC----------------CccccccccceeCHHHHhc-CCC
Confidence 99999999999999999999999999999999998653211 1234579999999999987 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC------------------------CCccccCCHHHHHH
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL------------------------PPSWVAKFSEQESL 639 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~------------------------p~~~~~~~~e~~~L 639 (1170)
+.++|||||||++|+|++ ||...........+....+.. .......++.+.+|
T Consensus 197 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 276 (326)
T 1blx_A 197 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDL 276 (326)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHH
T ss_pred CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHH
Confidence 999999999999999996 787665554444333211110 01123466789999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|.+||+.||.+|||+.++++||||....
T Consensus 277 i~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 304 (326)
T 1blx_A 277 LLKCLTFNPAKRISAYSALSHPYFQDLE 304 (326)
T ss_dssp HHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred HHHHcCCCcccCCCHHHHhcCccccccc
Confidence 9999999999999999999999998764
No 145
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.2e-39 Score=361.30 Aligned_cols=255 Identities=25% Similarity=0.398 Sum_probs=204.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++.+.||+|+||.||+|.++.+|+.||||++..... .......+.+|+.+++.++||||+++++++..
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 82 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST------ 82 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec------
Confidence 45899999999999999999999999999999999975321 11234578899999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 83 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH 128 (276)
T 2h6d_A 83 ----------------------------------PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 128 (276)
T ss_dssp ----------------------------------SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999996 599999988888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++....... ......||+.|+|||++.+....+.++
T Consensus 129 ~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 192 (276)
T 2h6d_A 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----------------FLRTSCGSPNYAAPEVISGRLYAGPEV 192 (276)
T ss_dssp HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----------------------------CCTGGGTTSCCCHHHH
T ss_pred HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc----------------ceecccCCccccCHHHHcCCCCCCccc
Confidence 9999999999999999999999999999998653211 112347999999999998754457899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||||+++|+|++ ||...................| ...++++.++|.+||+.||.+|||+.++++|+||.+.
T Consensus 193 Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~ 268 (276)
T 2h6d_A 193 DIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP---EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268 (276)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred hHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc---hhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence 99999999999997 7766554444433333222233 2456789999999999999999999999999988654
No 146
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=385.19 Aligned_cols=260 Identities=25% Similarity=0.408 Sum_probs=190.2
Q ss_pred cCCceE-EeeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEE-LQPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~-~~~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.+.|++ .++||+|+||+||+|+++ .+++.||||++..... ...+.+|+.+|+.++||||++++++|...
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~---- 90 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSH---- 90 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEET----
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecC----
Confidence 345666 457999999999999977 5688999999864433 24688999999999999999999988542
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc---------CCCCHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQ 501 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~e~~~~~i~~q 501 (1170)
....+|+|||||+++|.+++... ..+++..++.++.|
T Consensus 91 ----------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 136 (405)
T 3rgf_A 91 ----------------------------------ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ 136 (405)
T ss_dssp ----------------------------------TTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHH
T ss_pred ----------------------------------CCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHH
Confidence 24578999999999998887532 24999999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceee----cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi----~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
|+.||+|||++||+||||||+|||+ +.++.+||+|||+|+....... ........+||+.|+||
T Consensus 137 i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~~gt~~y~aP 204 (405)
T 3rgf_A 137 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK------------PLADLDPVVVTFWYRAP 204 (405)
T ss_dssp HHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------------------CCCTTCCH
T ss_pred HHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCc------------ccccCCCceecCcccCc
Confidence 9999999999999999999999999 6778999999999987542210 01122456899999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHH---------HHHHHHhhhcCCCC-Cccc--------------
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDLKQKGELP-PSWV-------------- 630 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~---------~~~~~~l~~~~~~p-~~~~-------------- 630 (1170)
|++.+...++.++|||||||++|||++ ||...... .....+....+..+ ..|.
T Consensus 205 E~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~ 284 (405)
T 3rgf_A 205 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKD 284 (405)
T ss_dssp HHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHH
T ss_pred hhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhh
Confidence 999875669999999999999999997 77533221 11212211111111 1111
Q ss_pred --------------------cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 631 --------------------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 631 --------------------~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
..++++.+||++||+.||.+|||++++|+||||....
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 285 FRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp CCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred ccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence 1145788999999999999999999999999998754
No 147
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.8e-39 Score=368.16 Aligned_cols=254 Identities=24% Similarity=0.360 Sum_probs=205.8
Q ss_pred cccCCceEEeeeccCCcEEEEEEEE-ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCC------ceeEEEEEe
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH------VVRYYQAWF 424 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~-~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hpn------IV~l~~~~~ 424 (1170)
...++|++.+.||+|+||+||+|.+ +.+|+.||||+++. .......+.+|+.+++.++|+| |++++++|.
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec---CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence 4457999999999999999999998 56899999999863 2344567889999999997765 899998873
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQI 502 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI 502 (1170)
. ...+|+|||||+++|.+++.... .+++..++.++.||
T Consensus 88 ~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi 127 (339)
T 1z57_A 88 H----------------------------------------HGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQI 127 (339)
T ss_dssp E----------------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred c----------------------------------------CCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHH
Confidence 3 35789999999989999998765 68999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecC-------------------CCCEEEeecCcchhccccccccCCCCCCCCCCccc
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDA-------------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 563 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~-------------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 563 (1170)
+.||+|||++||+||||||+|||++. ++.+||+|||+++....
T Consensus 128 ~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~------------------ 189 (339)
T 1z57_A 128 CKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE------------------ 189 (339)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS------------------
T ss_pred HHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc------------------
Confidence 99999999999999999999999987 66899999999975321
Q ss_pred cCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc-----------
Q 001059 564 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW----------- 629 (1170)
Q Consensus 564 ~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~----------- 629 (1170)
.....+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+.........+..|..+
T Consensus 190 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 268 (339)
T 1z57_A 190 HHSTLVSTRHYRAPEVILA-LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFH 268 (339)
T ss_dssp CCCSSCSCGGGCCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEE
T ss_pred ccccccCCccccChHHhhC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHh
Confidence 1134579999999999987 568999999999999999997 7765554443322222222222110
Q ss_pred ------------------------------ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 630 ------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 630 ------------------------------~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
...++++.+||.+||+.||.+|||+.++++||||....
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 269 HDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK 336 (339)
T ss_dssp TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred hccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence 11235688999999999999999999999999998764
No 148
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.6e-39 Score=370.47 Aligned_cols=254 Identities=20% Similarity=0.326 Sum_probs=203.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++.+.||+|+||+||+|++..+|+.||||+++.. ....+.+|+.+|+.++ ||||+++++++.+.
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~----- 103 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDP----- 103 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECT-----
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccC-----
Confidence 357899999999999999999999999999999998632 2467899999999997 99999999987432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.....+++||||+ ++|.+++. .+++..++.++.||+.||+|||
T Consensus 104 ---------------------------------~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH 147 (330)
T 3nsz_A 104 ---------------------------------VSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 147 (330)
T ss_dssp ---------------------------------TTCCEEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHH
Confidence 2356799999997 58888775 3899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 511 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
++||+||||||+|||++.++ .+||+|||+|+...... ......||+.|+|||++.+...++.+
T Consensus 148 ~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 211 (330)
T 3nsz_A 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----------------EYNVRVASRYFKGPELLVDYQMYDYS 211 (330)
T ss_dssp HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC----------------CCCSCCSCGGGCCHHHHTTCCCCCTH
T ss_pred hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC----------------ccccccccccccChhhhcCCCcCCch
Confidence 99999999999999999776 89999999998653211 12345799999999999876678999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHH-HHHHHHh------------h-hcCCCC---------------------Ccccc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMER-QIVLSDL------------K-QKGELP---------------------PSWVA 631 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~-~~~~~~l------------~-~~~~~p---------------------~~~~~ 631 (1170)
+|||||||++|+|++ ||...... ....... . .....+ .....
T Consensus 212 ~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (330)
T 3nsz_A 212 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHL 291 (330)
T ss_dssp HHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGG
T ss_pred hhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhcccccccc
Confidence 999999999999996 77432211 1111100 0 001111 11222
Q ss_pred CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 632 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 632 ~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
.++++.+||++||+.||.+|||++++|+||||.....
T Consensus 292 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 328 (330)
T 3nsz_A 292 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 328 (330)
T ss_dssp CCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence 5789999999999999999999999999999998754
No 149
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=6e-39 Score=376.44 Aligned_cols=256 Identities=24% Similarity=0.346 Sum_probs=206.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CC-----CceeEEEEE
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQ-----HVVRYYQAW 423 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-Hp-----nIV~l~~~~ 423 (1170)
...+.++|++.+.||+|+||+||+|+++.+|+.||||+++. .......+.+|+.+++.++ |+ +|++++++|
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~ 125 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF 125 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec---cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence 45567899999999999999999999999999999999963 2334567788999998885 55 488988887
Q ss_pred eecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHHH
Q 001059 424 FETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQ 501 (1170)
Q Consensus 424 ~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~q 501 (1170)
.. ...+|+|||||+++|.+++... ..+++..++.++.|
T Consensus 126 ~~----------------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~q 165 (382)
T 2vx3_A 126 MF----------------------------------------RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165 (382)
T ss_dssp EE----------------------------------------TTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHH
T ss_pred cc----------------------------------------CCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHH
Confidence 43 3578999999999999999765 46999999999999
Q ss_pred HHHHHHHHH--hCCccccCCCCCceeec--CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 502 IVEGLAHIH--GQGIIHRDLTPNNIFFD--ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 502 I~~gL~yLH--s~gIiHrDLKp~NILi~--~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
|+.||.||| ..||+||||||+|||++ .++.+||+|||+|+..... ....+||+.|+||
T Consensus 166 i~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~------------------~~~~~~t~~y~aP 227 (382)
T 2vx3_A 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------------------IYQYIQSRFYRSP 227 (382)
T ss_dssp HHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC------------------CCSSCSCGGGCCH
T ss_pred HHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc------------------cccccCCccccCh
Confidence 999999999 47999999999999995 4678999999999864211 2345899999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccc------------------------
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV------------------------ 630 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~------------------------ 630 (1170)
|++.+ ..++.++|||||||++|||++ ||......+....+....+..|....
T Consensus 228 E~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (382)
T 2vx3_A 228 EVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTK 306 (382)
T ss_dssp HHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCC
T ss_pred HHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhcccccccccccc
Confidence 99988 568999999999999999997 88766655544444332221111000
Q ss_pred -------------------------------------cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 631 -------------------------------------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 631 -------------------------------------~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
...+++.+||.+||+.||.+|||+.++|+||||.+..
T Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~ 380 (382)
T 2vx3_A 307 DGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 380 (382)
T ss_dssp TTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred ccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence 0013688999999999999999999999999998754
No 150
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.1e-39 Score=370.95 Aligned_cols=256 Identities=26% Similarity=0.411 Sum_probs=215.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|.+.+.||+|+||.||+|++..+++.||+|++..... .....+.+.+|+.+++.++||||++++++|.+
T Consensus 38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 112 (335)
T 2owb_A 38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED----- 112 (335)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 445789999999999999999999999999999999975532 33455678999999999999999999998732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++||||+ ++|.+++.....+++.+++.++.||+.||+||
T Consensus 113 -----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (335)
T 2owb_A 113 -----------------------------------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL 157 (335)
T ss_dssp -----------------------------------SSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999997 59999998888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.+
T Consensus 158 H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 221 (335)
T 2owb_A 158 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---------------ERKKVLCGTPNYIAPEVLSK-KGHSFE 221 (335)
T ss_dssp HHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCCSSCCHHHHHT-SCBCTH
T ss_pred HHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc---------------ccccccCCCccccCHHHhcc-CCCCch
Confidence 99999999999999999999999999999998653111 01234579999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+|||||||++|+|++ ||......+...........++. ..++++.+||++||+.||.+|||+.++++|+||...
T Consensus 222 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~ 298 (335)
T 2owb_A 222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK---HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 298 (335)
T ss_dssp HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred hhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCc---cCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 999999999999997 78766555554444443333333 456789999999999999999999999999987643
No 151
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=5.9e-39 Score=361.72 Aligned_cols=255 Identities=26% Similarity=0.417 Sum_probs=214.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|.+.+.||+|+||+||+|.+..+++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----- 86 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED----- 86 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-----
Confidence 345789999999999999999999999999999999976542 33455678999999999999999999998732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++||||+ ++|.+++.....+++..++.++.||+.||+||
T Consensus 87 -----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 131 (294)
T 2rku_A 87 -----------------------------------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL 131 (294)
T ss_dssp -----------------------------------SSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 456899999997 59999998888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.+
T Consensus 132 H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~ 195 (294)
T 2rku_A 132 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---------------ERKKVLCGTPNYIAPEVLSK-KGHSFE 195 (294)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCCSSCCHHHHTT-SCBCTH
T ss_pred HHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc---------------cccccccCCCCcCCcchhcc-CCCCch
Confidence 99999999999999999999999999999998643111 01233579999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
+||||||+++|+|++ ||......+............|. ..++.+.++|.+||+.||.+|||+.++++|+|+..
T Consensus 196 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 271 (294)
T 2rku_A 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK---HINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 271 (294)
T ss_dssp HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCcc---ccCHHHHHHHHHHcccChhhCcCHHHHhhChheec
Confidence 999999999999997 77766555554444433333333 45678999999999999999999999999998754
No 152
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=5.4e-39 Score=373.22 Aligned_cols=262 Identities=22% Similarity=0.326 Sum_probs=204.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---------hhhHHHHHHHHHHHHhccCCCceeEEEEEe
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---------LPVNDRILREVATLSRLQHQHVVRYYQAWF 424 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---------~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~ 424 (1170)
.++|++.+.||+|+||.||+|.+. +|+.||||++...... ....+.+.+|+.+|+.++||||++++++|.
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 99 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence 478999999999999999999987 4999999998654322 112367999999999999999999999885
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIV 503 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~ 503 (1170)
... ......+|+|||||+++|.+.+.... .+++..++.++.||+
T Consensus 100 ~~~-----------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~ 144 (362)
T 3pg1_A 100 HFE-----------------------------------EPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHIL 144 (362)
T ss_dssp ECC-----------------------------------TTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHH
T ss_pred ecc-----------------------------------CCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 421 01245789999999999998887544 699999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
.||+|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+.
T Consensus 145 ~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~ 208 (362)
T 3pg1_A 145 LGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA----------------NKTHYVTHRWYRAPELVMQF 208 (362)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC-------------------------------CGGGCCHHHHTTC
T ss_pred HHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccccccccc----------------ccceecccceecCcHHhcCC
Confidence 99999999999999999999999999999999999997532211 12345799999999998875
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC------------------------C-----Ccccc
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL------------------------P-----PSWVA 631 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~------------------------p-----~~~~~ 631 (1170)
..++.++|||||||++|+|++ ||......+....+....+.. + .....
T Consensus 209 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (362)
T 3pg1_A 209 KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT 288 (362)
T ss_dssp TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTT
T ss_pred CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCC
Confidence 678999999999999999997 887655444433332211110 0 01234
Q ss_pred CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 632 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 632 ~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.++.+.+||.+||+.||.+|||+.++++||||....
T Consensus 289 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 324 (362)
T 3pg1_A 289 ADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF 324 (362)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred CCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence 467899999999999999999999999999998763
No 153
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1e-40 Score=390.84 Aligned_cols=272 Identities=15% Similarity=0.138 Sum_probs=199.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHH---HHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREV---ATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev---~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++.+.||+|+||+||+|+++.+|+.||||+++... ......+.+.+|+ ..|+.++|||||+++++|....-
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~- 150 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD- 150 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE-
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh-
Confidence 368999999999999999999999899999999998553 2334567889999 55555689999999855432100
Q ss_pred ccCCCCCCCCCcccccccccccccc-cccccccccccccEEEEEeeccCCcHHHHHHhcCCCCH-------HHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASS-ADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDK-------ELAWHLFRQ 501 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e-------~~~~~i~~q 501 (1170)
.+....... ...........-...|++||||+|+|.+++...+.+++ ..++.++.|
T Consensus 151 ----------------~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~q 214 (377)
T 3byv_A 151 ----------------LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQ 214 (377)
T ss_dssp ----------------EEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHH
T ss_pred ----------------hhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHH
Confidence 000000000 00000000001124799999999999999987655555 788889999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
|+.||+|||++||+||||||+|||++.++.+||+|||+|+.... ..+..+| +.|+|||++.
T Consensus 215 i~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~------------------~~~~~~g-~~y~aPE~~~ 275 (377)
T 3byv_A 215 VIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------------------RVVSSVS-RGFEPPELEA 275 (377)
T ss_dssp HHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTC------------------EEECCCC-TTCCCHHHHH
T ss_pred HHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCC------------------cccCCCC-cCccChhhhc
Confidence 99999999999999999999999999999999999999985321 1134567 9999999998
Q ss_pred CC----------CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCC
Q 001059 582 GW----------PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648 (1170)
Q Consensus 582 ~~----------~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP 648 (1170)
+. ..++.++|||||||++|||++ ||........... ....+...++++.+||.+||+.||
T Consensus 276 ~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~L~~dp 348 (377)
T 3byv_A 276 RRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEW-------IFRSCKNIPQPVRALLEGFLRYPK 348 (377)
T ss_dssp HHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGG-------GGSSCCCCCHHHHHHHHHHTCSSG
T ss_pred ccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhh-------hhhhccCCCHHHHHHHHHHcCCCc
Confidence 73 168999999999999999997 7754332211111 111224567899999999999999
Q ss_pred CCCCCHHHHHhccCCCCchH
Q 001059 649 SDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 649 ~~RPta~eiL~~~~~~~~~~ 668 (1170)
.+|||+.++++||||.+...
T Consensus 349 ~~Rpt~~e~l~hp~f~~~~~ 368 (377)
T 3byv_A 349 EDRLLPLQAMETPEYEQLRT 368 (377)
T ss_dssp GGCCCHHHHHTSHHHHHHHH
T ss_pred hhCCCHHHHhhChHHHHHHH
Confidence 99999999999999876543
No 154
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.5e-39 Score=372.03 Aligned_cols=261 Identities=23% Similarity=0.368 Sum_probs=206.3
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------hhhHHHHHHHHHHHHhccCCCceeEEEEEe
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------LPVNDRILREVATLSRLQHQHVVRYYQAWF 424 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~------~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~ 424 (1170)
....++|++.+.||+|+||.||+|+++.+|+.||||++...... ......+.+|+.+|+.++||||+++++++.
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 34557899999999999999999999999999999999654321 112345889999999999999999998872
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~ 503 (1170)
. ..+|+|||||++ +|.+++.....+++..++.++.||+
T Consensus 86 ~-----------------------------------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~ 124 (322)
T 2ycf_A 86 A-----------------------------------------EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124 (322)
T ss_dssp S-----------------------------------------SSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHH
T ss_pred C-----------------------------------------CceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHH
Confidence 1 226999999975 9999998888899999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCC---EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 580 (1170)
.||+|||++||+||||||+|||++.++. +||+|||+++...... ......||+.|+|||++
T Consensus 125 ~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~ 188 (322)
T 2ycf_A 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----------------LMRTLCGTPTYLAPEVL 188 (322)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH----------------HHHHHHSCCTTCCHHHH
T ss_pred HHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccccc----------------ccccccCCcCccCchhh
Confidence 9999999999999999999999987654 9999999998653211 11235799999999997
Q ss_pred c--CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhh-hcCCC-CCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 581 Q--GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 581 ~--~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~-~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
. +...++.++|||||||++|+|++ ||............+. ..... +..+...++++.+||++||+.||.+|||
T Consensus 189 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps 268 (322)
T 2ycf_A 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT 268 (322)
T ss_dssp HHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred ccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCC
Confidence 4 23568999999999999999997 7754432211112121 12222 2334567789999999999999999999
Q ss_pred HHHHHhccCCCCchH
Q 001059 654 ATELLQDALPPQMEY 668 (1170)
Q Consensus 654 a~eiL~~~~~~~~~~ 668 (1170)
+.++++|+|+.....
T Consensus 269 ~~~~l~h~~~~~~~~ 283 (322)
T 2ycf_A 269 TEEALRHPWLQDEDM 283 (322)
T ss_dssp HHHHHTSGGGCCHHH
T ss_pred HHHHhhCcCcCCHHH
Confidence 999999999987653
No 155
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-39 Score=374.68 Aligned_cols=262 Identities=26% Similarity=0.408 Sum_probs=209.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeec
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 426 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~ 426 (1170)
..++|++.+.||+|+||+||+|++. .+|+.||||+++.... .......+.+|+.+|+.+ +||||++++++|..
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 130 (355)
T 1vzo_A 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT- 130 (355)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-
T ss_pred cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee-
Confidence 3579999999999999999999994 5899999999864321 112234577899999999 69999999988733
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 131 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~a 171 (355)
T 1vzo_A 131 ---------------------------------------ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 171 (355)
T ss_dssp ---------------------------------------TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 356899999997 5999999988899999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-C
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-P 584 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~ 584 (1170)
|+|||++||+||||||+|||++.++.+||+|||+++....... ......+||+.|+|||++.+. .
T Consensus 172 L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~ 237 (355)
T 1vzo_A 172 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET--------------ERAYDFCGTIEYMAPDIVRGGDS 237 (355)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG--------------GGGCGGGSCCTTCCHHHHTTCC-
T ss_pred HHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCC--------------CcccCcccCcCccChhhhcCCCC
Confidence 9999999999999999999999999999999999986532211 112345799999999999862 3
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchh----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----- 652 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP----- 652 (1170)
.++.++|||||||++|||++ ||.... ............. +.....++.+.+||.+||..||.+||
T Consensus 238 ~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~ 314 (355)
T 1vzo_A 238 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP---PYPQEMSALAKDLIQRLLMKDPKKRLGCGPR 314 (355)
T ss_dssp --CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC---CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTT
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCC---CCCcccCHHHHHHHHHHhhhCHHHhcCCCCC
Confidence 47899999999999999997 775322 1222222222222 23345667899999999999999999
Q ss_pred CHHHHHhccCCCCchHHHH
Q 001059 653 SATELLQDALPPQMEYELL 671 (1170)
Q Consensus 653 ta~eiL~~~~~~~~~~~~~ 671 (1170)
++.++++|+||....+..+
T Consensus 315 s~~ell~h~~f~~~~~~~l 333 (355)
T 1vzo_A 315 DADEIKEHLFFQKINWDDL 333 (355)
T ss_dssp THHHHHTSGGGTTCCHHHH
T ss_pred CHHHHHcCcchhcCChhHh
Confidence 9999999999998876543
No 156
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=6.3e-39 Score=360.46 Aligned_cols=259 Identities=29% Similarity=0.526 Sum_probs=216.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+.+.++|++.+.||+|+||.||+|+++.+|+.||||++............+.+|+.++++++||||+++++++.+
T Consensus 17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (287)
T 2wei_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED---- 92 (287)
T ss_dssp THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----
T ss_pred HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC----
Confidence 4566789999999999999999999999999999999997654444456789999999999999999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|++|||++ ++|.+.+.....+++..++.++.||+.||+|
T Consensus 93 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~ 136 (287)
T 2wei_A 93 ------------------------------------SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136 (287)
T ss_dssp ------------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999996 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
||++||+||||||+|||++.+ +.+||+|||++....... ......||+.|+|||++.+ .
T Consensus 137 LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~--~ 198 (287)
T 2wei_A 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----------------KMKDRIGTAYYIAPEVLRG--T 198 (287)
T ss_dssp HHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS----------------SCSCHHHHHTTCCHHHHTT--C
T ss_pred HHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC----------------ccccccCcccccChHHhcC--C
Confidence 999999999999999999764 479999999998653211 1133468999999999986 4
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
++.++||||||+++|+|++ ||......+............+ +.+...++++.++|++||+.||.+|||+.++++||
T Consensus 199 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 278 (287)
T 2wei_A 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278 (287)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCH
Confidence 8999999999999999997 7776655554444333332222 34456788999999999999999999999999999
Q ss_pred CCCCc
Q 001059 662 LPPQM 666 (1170)
Q Consensus 662 ~~~~~ 666 (1170)
|+.+.
T Consensus 279 ~~~~~ 283 (287)
T 2wei_A 279 WIQKY 283 (287)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 87643
No 157
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=360.72 Aligned_cols=255 Identities=25% Similarity=0.422 Sum_probs=205.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|.+..+|+.||||++.... ....+.+|+.+++.++||||+++++++..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 95 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFK------- 95 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-------
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEe-------
Confidence 3578999999999999999999999999999999997543 23578899999999999999999998743
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~-~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||++ +|.+++. ....+++..++.++.||+.||.|||
T Consensus 96 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 142 (314)
T 3com_A 96 ---------------------------------NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH 142 (314)
T ss_dssp ---------------------------------TTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3567999999975 9999886 4567999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++
T Consensus 143 ~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 206 (314)
T 3com_A 143 FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVIQE-IGYNCVA 206 (314)
T ss_dssp HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB---------------SCBCCCCSCGGGCCHHHHSS-SCBCTTH
T ss_pred hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc---------------cccCccCCCCCccChhhcCC-CCCCccc
Confidence 9999999999999999999999999999997653211 01234579999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||||||++|+|++ ||..........................++.+.+||.+||+.||.+|||+.++++|+|+....
T Consensus 207 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~ 286 (314)
T 3com_A 207 DIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286 (314)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred cHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence 99999999999997 776655444433332222222223344677999999999999999999999999999987654
No 158
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.4e-40 Score=383.70 Aligned_cols=282 Identities=16% Similarity=0.211 Sum_probs=193.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc--cCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL--QHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l--~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+|++.+.||+|+||+||+|+++.+|+.||||++..... .....+.+.+|+.+++.+ +||||++++..+..+.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~---- 137 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPS---- 137 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCC----
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeee----
Confidence 469999999999999999999999999999999987654 233455677886555555 5999998774442110
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHH------HHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELA------WHLFRQIVE 504 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~------~~i~~qI~~ 504 (1170)
+.....|. .................+|+|||||+++|.+++...+ .+.+... +.++.||+.
T Consensus 138 --d~~~~~~~----------~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~ 205 (371)
T 3q60_A 138 --DAVAVQSQ----------PPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIR 205 (371)
T ss_dssp --EEEEETTS----------CSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred --hheecCCC----------CCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHH
Confidence 00000000 0000000000011235689999999999999997643 3444445 577799999
Q ss_pred HHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW- 583 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~- 583 (1170)
||+|||++||+||||||+|||++.++.+||+|||+|+..... .....+|+.|+|||++.+.
T Consensus 206 aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~------------------~~~~~~t~~y~aPE~~~~~~ 267 (371)
T 3q60_A 206 LAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR------------------GPASSVPVTYAPREFLNAST 267 (371)
T ss_dssp HHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE------------------EEGGGSCGGGCCHHHHTCSE
T ss_pred HHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC------------------ccCccCCcCCcChhhccCCC
Confidence 999999999999999999999999999999999999864311 1134677999999999752
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHH-----Hhh-hcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS-----DLK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~-----~l~-~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
..++.++|||||||++|||++ ||........... ... ......+.+...++++.+||.+||+.||.+|||+
T Consensus 268 ~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 347 (371)
T 3q60_A 268 ATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLP 347 (371)
T ss_dssp EECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCH
T ss_pred CCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCH
Confidence 358999999999999999997 7765432110000 000 0011122334678899999999999999999999
Q ss_pred HHHHhccCCCCchHHH
Q 001059 655 TELLQDALPPQMEYEL 670 (1170)
Q Consensus 655 ~eiL~~~~~~~~~~~~ 670 (1170)
.++|+||||.+..+..
T Consensus 348 ~e~l~hp~f~~~~~~~ 363 (371)
T 3q60_A 348 LEAMETPEFLQLQNEI 363 (371)
T ss_dssp HHHTTSHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHH
Confidence 9999999998776553
No 159
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.7e-39 Score=365.55 Aligned_cols=254 Identities=22% Similarity=0.363 Sum_probs=201.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|+++.+|+.||||+++.... ....+.+.+|+.+|+.++||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 79 (319)
T 4euu_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEET------ 79 (319)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT------
T ss_pred CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecC------
Confidence 34689999999999999999999999999999999974332 22356788999999999999999999987432
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|+|||||+ ++|.+++..... +++..++.++.||+.||+|
T Consensus 80 --------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~ 127 (319)
T 4euu_A 80 --------------------------------TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127 (319)
T ss_dssp --------------------------------TTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHH
Confidence 2346799999996 699999976543 9999999999999999999
Q ss_pred HHhCCccccCCCCCceee----cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--
Q 001059 509 IHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-- 582 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi----~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-- 582 (1170)
||++||+||||||+|||+ +.++.+||+|||+++...... ......||+.|+|||++..
T Consensus 128 LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~ 191 (319)
T 4euu_A 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----------------QFVSLYGTEEYLHPDMYERAV 191 (319)
T ss_dssp HHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHHHHT
T ss_pred HHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC----------------ceeecccCCCccCHHHhhhcc
Confidence 999999999999999999 777889999999998653221 1234579999999999862
Q ss_pred -----CCCCCccchhHHHHHHHHHhhc---CCCch----hHHHHHHHHhhhcCC-------------------CCC---c
Q 001059 583 -----WPKIDEKADMYSLGIVFFELWH---PFSTA----MERQIVLSDLKQKGE-------------------LPP---S 628 (1170)
Q Consensus 583 -----~~~~~~ksDIwSlGviL~ELlt---Pf~~~----~~~~~~~~~l~~~~~-------------------~p~---~ 628 (1170)
...++.++|||||||++|||++ ||... ...+.....+..... .+. .
T Consensus 192 ~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (319)
T 4euu_A 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSL 271 (319)
T ss_dssp SCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSS
T ss_pred ccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCccccc
Confidence 2568999999999999999997 77532 223333333332221 111 1
Q ss_pred cccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 629 WVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 629 ~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
....++.+.+||++||+.||.+|||++|+|+|+
T Consensus 272 ~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 272 SRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp CHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred chhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 112234678999999999999999999999996
No 160
>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A*
Probab=100.00 E-value=2.7e-41 Score=404.23 Aligned_cols=372 Identities=10% Similarity=0.020 Sum_probs=269.9
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC--CcccccceEEEeccCCceeeecC---CC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD--CPQFKRNTVKLLTHGGDLLELSH---EL 783 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~--~~~~~~~my~f~D~~G~~laLRP---D~ 783 (1170)
+.+.|++||+|.+++++++|++.+++.|.++||++|.||+| ++... .+.+.++||+|.|++|+.++||| |+
T Consensus 54 ~~~~G~~d~lP~g~~~~~~i~~~ir~~~~~~G~~ei~tP~l~~~el~~~sg~~d~~~~em~~~~d~~~~~~~LrPt~ee~ 133 (458)
T 2i4l_A 54 QEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEM 133 (458)
T ss_dssp EEETTEEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTHHHHSCTTSEEEECTTCCEEEECSCCHHH
T ss_pred ccCCcceEECCCHHHHHHHHHHHHHHHHHHcCCEEEEcCccCcHHHHHhcCCccccccceEEEEeCCCCeEEECCCChHH
Confidence 45899999999999999999999999999999999999999 22222 34678999999999999999999 89
Q ss_pred CHHHHHHHHh-CCCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcccHHHHHHH---HHHHHHHcCCCcc
Q 001059 784 RLPFIRWAIS-NQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKV---TMDIVTRFFHAES 855 (1170)
Q Consensus 784 T~~iaR~~~~-~~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEvi~l---a~~~l~~lgi~~~ 855 (1170)
|++++|..+. ++..|+|+||+|+|||+| +|+. |.|||+|+|+|+||.++..+|+|++.+ +.+++++||++
T Consensus 134 t~~i~r~~~~s~~~lP~rl~~ig~~fR~E~~p~~Gl~R~REF~q~d~~~f~~~~~~ad~e~~~~~~~~~~i~~~lGl~-- 211 (458)
T 2i4l_A 134 ITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFARMGLK-- 211 (458)
T ss_dssp HHHHHHHHCCBGGGCSEEEEEEEEEECCCSSCBTGGGBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTTTCC--
T ss_pred HHHHHHHHHhhccccCeeeEEecCEeeCCCCCCCCcccccceEEeEEEEEECCHHHHHHHHHHHHHHHHHHHHHcCCc--
Confidence 9999998765 456799999999999999 8875 457799999999999888999998755 99999999995
Q ss_pred eEEEeCcHHHHHHHHHHh-----CCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHH
Q 001059 856 CDIHLNHGDLLEAIWSWA-----GIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 930 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l~~l-----gl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 930 (1170)
+.+.+++++.+.+.+... ...++.. ..+......+ ... . +.. +.+ .+..+
T Consensus 212 ~~~~~~~~g~~gg~~s~e~~~l~~~ged~i-~~~~~~~~~n-~~~--~--------------~~~-~~~----~l~~~-- 266 (458)
T 2i4l_A 212 AIPMRAETGPIGGDLSHEFIVLAETGESGV-YIDRDVLNLP-VPD--E--------------NVD-YDG----DLTPI-- 266 (458)
T ss_dssp EEEEECCCCSSCSSCEEEEEEECTTCSEEE-EEEGGGGGCC-CCC--T--------------TCC-TTS----CCHHH--
T ss_pred eEEEEccccccCCccchhhhhhhhcCcceE-EecccccccC-HHH--H--------------hcc-ccH----hHHHH--
Confidence 999999987654433210 1111000 0000000000 000 0 000 000 00001
Q ss_pred HhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecc
Q 001059 931 RFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAV 1010 (1170)
Q Consensus 931 ~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~ 1010 (1170)
++.+..+...++.. .+.+ ..+ + ..+.+|++++||++ ||++|++ +.. .+++.
T Consensus 267 ---------l~~~~~~~~~~~~~--~~g~-~~~--~--~~~~~~l~~~rgl~--~G~iFel---g~~--------~s~~~ 317 (458)
T 2i4l_A 267 ---------IKQWTSVYAATEDV--HEPA-RYE--S--EVPEANRLNTRGIE--VGQIFYF---GTK--------YSDSM 317 (458)
T ss_dssp ---------HHHHHHSCEEETTT--CCTT-HHH--H--HSCTTTEEEEEEEE--EEEEEEE---ETH--------HHHHT
T ss_pred ---------HhcCchhhhcChhh--cccc-ccc--C--CCCCcCceeeeeec--cCcEEEe---ccc--------ccccC
Confidence 11000000000000 0000 000 0 13557899999999 9999998 222 37999
Q ss_pred ccccchhhhhcccccccccCCCCCCCC--ceEEeccHHHHHhhcc-C-----CCCCCCCCCCceEEEEEcC--CCccHHH
Q 001059 1011 GGRYDYLLHRMWDREYVGYASRTNPPS--GVGASLALETIIQHYP-V-----DFKPVRNEAGTSVLVCSRG--GGGLLVE 1080 (1170)
Q Consensus 1011 GGRYD~L~~~fg~~~~~~~~g~~~~~p--AvGfaiglerL~~~L~-~-----~~~~~~~~~~~~vlv~~~~--~~~~~~~ 1080 (1170)
||||++. +|. +.| ++|||||+|||+.+|. + +...+...+|.+|+|++.+ ++.....
T Consensus 318 g~ry~~~---~G~-----------~~p~~~~gfgiGveRli~al~e~~~d~~g~~~p~~~ap~~v~vi~~~~~~~~~~~~ 383 (458)
T 2i4l_A 318 KANVTGP---DGT-----------DAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDAATDAA 383 (458)
T ss_dssp TCEEECT---TSC-----------EEECEEEEEEEEHHHHHHHHHHHSEETTEECCCTTTCSCSEEEEESSTTCHHHHHH
T ss_pred CcEEECC---CCC-----------EeceEEeeecccHHHHHHHHHHhhccccCCcCCcccCCceEEEEecCCCCHHHHHH
Confidence 9999875 222 235 8899999999998863 2 2233333467899999874 2456889
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHH
Q 001059 1081 RMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1155 (1170)
Q Consensus 1081 a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l 1155 (1170)
|.++++.||+.|++|++++. +.++++++++|++.|+|++|+||++|+++|+|+||++++++|..|+++++++.|
T Consensus 384 a~~l~~~Lr~~Gi~v~~D~~-~~~~g~k~~~ad~~g~p~~iivG~~e~~~g~v~vr~r~~~~~~~v~~~~l~~~l 457 (458)
T 2i4l_A 384 CDQLYRELSAKGVDVLYDDT-DQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELKRRSDGARENLALADVVARL 457 (458)
T ss_dssp HHHHHHHHHHTTCCEEEECS-SCCHHHHHHHHHHHTCSEEEEECHHHHTTTEEEEEETTTCCEEEEETTTTTCC-
T ss_pred HHHHHHHHhhCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEECCchhhCCEEEEEECCCCcEEEEeHHHHHHhh
Confidence 99999999999999998876 679999999999999999999999999999999999999999999999987654
No 161
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.3e-38 Score=367.30 Aligned_cols=258 Identities=24% Similarity=0.362 Sum_probs=208.3
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCC------ceeEEEE
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH------VVRYYQA 422 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg-~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hpn------IV~l~~~ 422 (1170)
...+.++|++.+.||+|+||+||+|.+..++ +.||||+++. .......+.+|+.+++.++|++ ++.++++
T Consensus 14 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 90 (355)
T 2eu9_A 14 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDW 90 (355)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEE
T ss_pred CceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeee
Confidence 3445689999999999999999999998777 6899999863 2344567889999999998776 7888777
Q ss_pred EeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHH
Q 001059 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFR 500 (1170)
Q Consensus 423 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~ 500 (1170)
+.. ...+|+|||||+++|.+.+.... .+++..++.++.
T Consensus 91 ~~~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~ 130 (355)
T 2eu9_A 91 FNF----------------------------------------HGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAY 130 (355)
T ss_dssp EEE----------------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred eee----------------------------------------CCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHH
Confidence 632 35789999999999888887654 699999999999
Q ss_pred HHHHHHHHHHhCCccccCCCCCceee-------------------cCCCCEEEeecCcchhccccccccCCCCCCCCCCc
Q 001059 501 QIVEGLAHIHGQGIIHRDLTPNNIFF-------------------DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGV 561 (1170)
Q Consensus 501 qI~~gL~yLHs~gIiHrDLKp~NILi-------------------~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~ 561 (1170)
||+.||+|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 131 qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~---------------- 194 (355)
T 2eu9_A 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE---------------- 194 (355)
T ss_dssp HHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS----------------
T ss_pred HHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc----------------
Confidence 99999999999999999999999999 5678999999999975321
Q ss_pred cccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc---------
Q 001059 562 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW--------- 629 (1170)
Q Consensus 562 ~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~--------- 629 (1170)
.....+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+.........+..|..+
T Consensus 195 --~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 271 (355)
T 2eu9_A 195 --HHTTIVATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKY 271 (355)
T ss_dssp --CCCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGG
T ss_pred --cccCCcCCCcccCCeeeec-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhh
Confidence 1234579999999999987 568999999999999999997 8876555444333322223322211
Q ss_pred --------------------------------ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHH
Q 001059 630 --------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 669 (1170)
Q Consensus 630 --------------------------------~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~ 669 (1170)
...++++.+||++||+.||.+|||+.++|+||||.+...+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 343 (355)
T 2eu9_A 272 FYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPE 343 (355)
T ss_dssp EETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCHH
T ss_pred hcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCChh
Confidence 0112478899999999999999999999999999987654
No 162
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=365.56 Aligned_cols=253 Identities=20% Similarity=0.306 Sum_probs=204.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
...++|++.+.||+|+||+||+|+++.+|+ .||||+++.. ........+.+|+.+|+.++||||++++++|.+
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 121 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR--- 121 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG---
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe---
Confidence 345789999999999999999999986555 5999999743 344456789999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||
T Consensus 122 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L 164 (325)
T 3kul_A 122 -------------------------------------GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164 (325)
T ss_dssp -------------------------------------GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 345799999996 5999999754 5799999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..+
T Consensus 165 ~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~~~t~~y~aPE~~~~-~~~ 231 (325)
T 3kul_A 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD------------AAYTTTGGKIPIRWTAPEAIAF-RTF 231 (325)
T ss_dssp HHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----------------CCEECC---CCGGGSCHHHHHH-CEE
T ss_pred HHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCcc------------ceeeccCCCCcccccCHhHhcC-CCC
Confidence 999999999999999999999999999999999986532210 0112234467889999999987 568
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|||++ ||......+....... ...++.....++++.+||.+||+.||.+|||+.++++.
T Consensus 232 ~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~ 307 (325)
T 3kul_A 232 SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE--GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSV 307 (325)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc--CCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999999986 7766555554443332 23333445677899999999999999999999999864
No 163
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.5e-38 Score=358.12 Aligned_cols=253 Identities=28% Similarity=0.446 Sum_probs=210.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..+.|++++.||+|+||.||+|++..+|+.||||++...... ...+.+.+|+.+++.++||||++++++|.+
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 91 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLK------- 91 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEec-------
Confidence 346799999999999999999999999999999999765432 345789999999999999999999998843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+||||+++ +|.+++.. ..+++..++.++.||+.||.|||+
T Consensus 92 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~ 137 (303)
T 3a7i_A 92 ---------------------------------DTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHS 137 (303)
T ss_dssp ---------------------------------TTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999975 88888764 579999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++|
T Consensus 138 ~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 201 (303)
T 3a7i_A 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDSKAD 201 (303)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHHH
T ss_pred CCCccCCCChheEEECCCCCEEEeecccceecCccc---------------cccCccCCCcCccCHHHHhc-CCCCchhh
Confidence 999999999999999999999999999998653221 11234579999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
||||||++|+|++ ||.............. ...+......++.+.+||.+||+.||.+|||+.++++|+|+..
T Consensus 202 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 276 (303)
T 3a7i_A 202 IWSLGITAIELARGEPPHSELHPMKVLFLIPK--NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 276 (303)
T ss_dssp HHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--SCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc--CCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence 9999999999997 7765554444333222 2233334456789999999999999999999999999998743
No 164
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=366.84 Aligned_cols=257 Identities=25% Similarity=0.360 Sum_probs=198.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.+..+|+.||+|++.. ......+.+.+|+.+++.++||||+++++++.+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------- 78 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-------- 78 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--------
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec--------
Confidence 4789999999999999999999999999999998853 344566789999999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++.. ...+++.+++.++.||+.||+|||+
T Consensus 79 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~ 126 (310)
T 3s95_A 79 --------------------------------DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126 (310)
T ss_dssp --------------------------------TTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999996 599999987 5679999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++............. .............+||+.|+|||++.+ ..++.++|
T Consensus 127 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 204 (310)
T 3s95_A 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR-SLKKPDRKKRYTVVGNPYWMAPEMING-RSYDEKVD 204 (310)
T ss_dssp TTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------------------CCCCSCGGGCCHHHHTT-CCCCTHHH
T ss_pred CCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccc-cccccccccccccCCCcceeCHHHhcC-CCCCcHHH
Confidence 9999999999999999999999999999987643321110000 000000111235689999999999988 67899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHH-----HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQ-----IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~-----~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
||||||++|||++ ||....... ....... ...+ ..+++++.++|.+||+.||.+|||+.++++
T Consensus 205 i~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 205 VFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD--RYCP---PNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH--HTCC---TTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc--ccCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9999999999996 443221100 0000000 1112 234568899999999999999999999986
No 165
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=7e-39 Score=371.36 Aligned_cols=252 Identities=23% Similarity=0.341 Sum_probs=203.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~-----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||.||+|++ ..+++.||||+++.. ........+.+|+.+|+++ +||||++++++|.+.
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~- 98 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 98 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST-
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC-
Confidence 47899999999999999999994 456789999999743 3344556799999999999 899999999988432
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCC-----------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH----------------- 489 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~----------------- 489 (1170)
...+|+|||||++ +|.+++.....
T Consensus 99 --------------------------------------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 140 (359)
T 3vhe_A 99 --------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKD 140 (359)
T ss_dssp --------------------------------------TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------
T ss_pred --------------------------------------CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccc
Confidence 2346899999974 99999876533
Q ss_pred -------------------------------------------------CCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 490 -------------------------------------------------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 490 -------------------------------------------------l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
+++..++.++.||+.||+|||++||+|||||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dik 220 (359)
T 3vhe_A 141 YVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 220 (359)
T ss_dssp -------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred cccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 8999999999999999999999999999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
|+|||++.++.+||+|||+++...... .........||+.|+|||++.+ ..++.++|||||||++|
T Consensus 221 p~NIll~~~~~~kl~Dfg~a~~~~~~~-------------~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ 286 (359)
T 3vhe_A 221 ARNILLSEKNVVKICDFGLARDIYKDP-------------DYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLW 286 (359)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTSCT-------------TCEEC--CEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHH
T ss_pred hhhEEEcCCCcEEEEeccceeeecccc-------------cchhccccCCCceeEChhhhcC-CCCCchhhhhhHHHHHH
Confidence 999999999999999999998643211 0112244578999999999987 56899999999999999
Q ss_pred Hhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 601 ELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 601 ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||++ ||............+.. ...+......++++.++|.+||+.||.+|||+.++++|
T Consensus 287 ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 287 EIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp HHTTTSCCSSTTCCCSHHHHHHHHH-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhcCCCCCCccchhHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 9996 77654433333333332 22333334567899999999999999999999999987
No 166
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=6.1e-39 Score=362.98 Aligned_cols=261 Identities=23% Similarity=0.367 Sum_probs=209.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC--ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
..++|++.+.||+|+||.||+|.+..+|+.||+|+++.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 78 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNE---- 78 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC----
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Confidence 46789999999999999999999999999999999975321 123456789999999999999999999987431
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|+|||||+++|.+++.. ...+++..++.++.||+.||+|
T Consensus 79 ----------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 124 (305)
T 2wtk_C 79 ----------------------------------EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEY 124 (305)
T ss_dssp -------------------------------------CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHH
Confidence 2356899999999888888765 3569999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-CCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-KID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~ 587 (1170)
||++||+||||||+|||++.++.+||+|||++........ ........||+.|+|||++.+.. .++
T Consensus 125 LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 191 (305)
T 2wtk_C 125 LHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA-------------DDTCRTSQGSPAFQPPEIANGLDTFSG 191 (305)
T ss_dssp HHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS-------------SCEECCCCSCGGGCCHHHHTCCSCEES
T ss_pred HHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcccc-------------ccccccCCCCCCCcChhhccCcccCCc
Confidence 9999999999999999999999999999999986532110 01113457999999999988632 247
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
.++|||||||++|||++ ||......+............+ ...++.+.+||.+||+.||.+|||+.++++|+|+.
T Consensus 192 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~ 268 (305)
T 2wtk_C 192 FKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP---GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFR 268 (305)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC---SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHH
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC---CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccc
Confidence 89999999999999997 8876655444443333332333 34667999999999999999999999999999886
Q ss_pred Cch
Q 001059 665 QME 667 (1170)
Q Consensus 665 ~~~ 667 (1170)
...
T Consensus 269 ~~~ 271 (305)
T 2wtk_C 269 KKH 271 (305)
T ss_dssp SCC
T ss_pred cCC
Confidence 543
No 167
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.5e-38 Score=358.63 Aligned_cols=255 Identities=27% Similarity=0.386 Sum_probs=200.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEE----EccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~----~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
...++|++++.||+|+||+||+|+ +..+|+.||||++.. ......+.+.+|+.+|+.++||||++++++|...
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 83 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA- 83 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC--CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH-
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-
Confidence 345789999999999999999999 456899999999864 3344557899999999999999999999987432
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~g 505 (1170)
....+|+|||||+ ++|.+++.... .+++..++.++.||+.|
T Consensus 84 -------------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~ 126 (295)
T 3ugc_A 84 -------------------------------------GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126 (295)
T ss_dssp -------------------------------------HHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 1345799999996 59999997654 49999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|+|||++||+||||||+|||++.++.+||+|||+++........ ........||+.|+|||++.+ ..
T Consensus 127 l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~ 193 (295)
T 3ugc_A 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF------------FKVKEPGESPIFWYAPESLTE-SK 193 (295)
T ss_dssp HHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------------------CTTCGGGGCCHHHHHH-CC
T ss_pred HHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcce------------eeeccCCCCccceeCcHHhcC-CC
Confidence 99999999999999999999999999999999999875422100 011233468889999999987 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHH---------------HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQ---------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~---------------~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
++.++|||||||++|||++ ||....... .....+. ....++....+++++.+||.+||+.|
T Consensus 194 ~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~d 272 (295)
T 3ugc_A 194 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK-NNGRLPRPDGCPDEIYMIMTECWNNN 272 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHSCSS
T ss_pred CChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh-ccCcCCCCcCcCHHHHHHHHHHcCCC
Confidence 8999999999999999997 444322110 1112222 23333444567789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 001059 648 PSDRPSATELLQD 660 (1170)
Q Consensus 648 P~~RPta~eiL~~ 660 (1170)
|.+|||+.++++.
T Consensus 273 p~~Rps~~el~~~ 285 (295)
T 3ugc_A 273 VNQRPSFRDLALR 285 (295)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhhCCCHHHHHHH
Confidence 9999999999864
No 168
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.8e-38 Score=371.10 Aligned_cols=250 Identities=23% Similarity=0.354 Sum_probs=202.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-------cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEee
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-------LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 425 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-------~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e 425 (1170)
.++|++.+.||+|+||+||+|++. .++..||||+++.. ........+.+|+.+|+.+ +||||++++++|.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 478999999999999999999985 34568999998743 3344567899999999999 89999999998732
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------- 488 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------- 488 (1170)
...+|+|||||+ |+|.+++....
T Consensus 159 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~ 198 (370)
T 2psq_A 159 ----------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 198 (370)
T ss_dssp ----------------------------------------SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCC
T ss_pred ----------------------------------------CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccc
Confidence 345799999997 59999997643
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 489 ~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .......
T Consensus 199 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~ 265 (370)
T 2psq_A 199 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-------------YKKTTNG 265 (370)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCT-------------TCTTTTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccc-------------eecccCC
Confidence 478999999999999999999999999999999999999999999999999986532210 0112345
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.||+.|+|||++.+ ..++.++|||||||++|||++ ||......+.... +. .+..+.....+++++.++|.+||
T Consensus 266 ~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l 342 (370)
T 2psq_A 266 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL-LK-EGHRMDKPANCTNELYMMMRDCW 342 (370)
T ss_dssp TSCGGGCCHHHHHT-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-HH-TTCCCCCCTTSCHHHHHHHHHHT
T ss_pred CcccceECHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-Hh-cCCCCCCCCCCCHHHHHHHHHHc
Confidence 68899999999987 569999999999999999986 6655443333322 22 23333444567789999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
+.||.+|||+.+++++
T Consensus 343 ~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 343 HAVPSQRPTFKQLVED 358 (370)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCChhhCcCHHHHHHH
Confidence 9999999999999975
No 169
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.1e-39 Score=364.49 Aligned_cols=267 Identities=24% Similarity=0.373 Sum_probs=188.2
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
....++|++.+.||+|+||.||+|++..+|+.||||++..... ......+.+|+.+++.++||||+++++++..
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 84 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVV----- 84 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEES-----
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEee-----
Confidence 3446899999999999999999999998999999999865432 2334678899999999999999999998743
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--------cCCCCHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--------YDHFDKELAWHLFRQ 501 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--------~~~l~e~~~~~i~~q 501 (1170)
...+|+||||++ ++|.+++.. ...+++..++.++.|
T Consensus 85 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~q 129 (303)
T 2vwi_A 85 -----------------------------------KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129 (303)
T ss_dssp -----------------------------------SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHH
T ss_pred -----------------------------------cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHH
Confidence 345799999996 599998863 345999999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
|+.||+|||++||+||||||+|||++.++.+||+|||++.......... .........||+.|+|||++.
T Consensus 130 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~----------~~~~~~~~~~~~~y~aPE~~~ 199 (303)
T 2vwi_A 130 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT----------RNKVRKTFVGTPCWMAPEVME 199 (303)
T ss_dssp HHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-------------------------CCCTTCCHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCcc----------chhhhcccCCCccccCHHHhc
Confidence 9999999999999999999999999999999999999998754221000 001123457999999999987
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-------CCccccCCHHHHHHHHHccCCCCCCC
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-------PPSWVAKFSEQESLLRRLMSPSPSDR 651 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-------p~~~~~~~~e~~~LI~~~L~~dP~~R 651 (1170)
+...++.++|||||||++|+|++ ||................... +......++++.+||.+||+.||.+|
T Consensus 200 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 279 (303)
T 2vwi_A 200 QVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR 279 (303)
T ss_dssp HHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGS
T ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhC
Confidence 53458999999999999999997 776554443333332221111 11234566789999999999999999
Q ss_pred CCHHHHHhccCCCCchH
Q 001059 652 PSATELLQDALPPQMEY 668 (1170)
Q Consensus 652 Pta~eiL~~~~~~~~~~ 668 (1170)
||+.++++|+||.+...
T Consensus 280 ps~~~ll~h~~~~~~~~ 296 (303)
T 2vwi_A 280 PTAAELLRHKFFQKAKN 296 (303)
T ss_dssp CCHHHHHTSTTC-----
T ss_pred cCHHHHhhChhhhcCCC
Confidence 99999999999987653
No 170
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=360.63 Aligned_cols=263 Identities=21% Similarity=0.382 Sum_probs=206.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++.+.||+|+||.||+|++..+|+.||||++..... ....+.+|+.+++++ +||||++++++|.....
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~--- 95 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP--- 95 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC----
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc---cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC---
Confidence 35789999999999999999999999999999999975433 346788999999999 89999999999854310
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qI~~gL~y 508 (1170)
......+|+|||||++ +|.+++... ..+++..++.++.||+.||+|
T Consensus 96 -------------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~ 144 (326)
T 2x7f_A 96 -------------------------------PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSH 144 (326)
T ss_dssp --------------------------------CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence 0124578999999975 999998764 569999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WP 584 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~ 584 (1170)
||++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..
T Consensus 145 lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 209 (326)
T 2x7f_A 145 LHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDA 209 (326)
T ss_dssp HHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC----------------------------CCGGGCCHHHHC-------
T ss_pred HHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCc---------------cccccccCCccccChhhhccccccCc
Confidence 999999999999999999999999999999998653211 01234579999999999863 24
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
.++.++|||||||++|+|++ ||.............. ...........++.+.+||.+||+.||.+|||+.++++||
T Consensus 210 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp 288 (326)
T 2x7f_A 210 TYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHP 288 (326)
T ss_dssp -CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSH
T ss_pred CCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc-CccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhCh
Confidence 58899999999999999997 7766555444333322 2222222345678999999999999999999999999999
Q ss_pred CCCCchH
Q 001059 662 LPPQMEY 668 (1170)
Q Consensus 662 ~~~~~~~ 668 (1170)
|+.....
T Consensus 289 ~~~~~~~ 295 (326)
T 2x7f_A 289 FIRDQPN 295 (326)
T ss_dssp HHHCCTT
T ss_pred HHhhCcc
Confidence 9877643
No 171
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.2e-39 Score=370.81 Aligned_cols=265 Identities=22% Similarity=0.411 Sum_probs=214.6
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh---------------hHHHHHHHHHHHHhccCCC
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP---------------VNDRILREVATLSRLQHQH 415 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~---------------~~~~~~~Ev~iL~~l~Hpn 415 (1170)
..+.++|++.+.||+|+||.||+|.+ +|+.||||++........ ....+.+|+.+++.++|||
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 104 (348)
T 2pml_X 27 DKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEY 104 (348)
T ss_dssp CEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTT
T ss_pred ccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCC
Confidence 45578999999999999999999999 899999999975322111 1178999999999999999
Q ss_pred ceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHH------HHh--
Q 001059 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQV------FES-- 486 (1170)
Q Consensus 416 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~------l~~-- 486 (1170)
|+++++++.+ ...+|+|||||++ +|.++ +..
T Consensus 105 i~~~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~ 144 (348)
T 2pml_X 105 CLTCEGIITN----------------------------------------YDEVYIIYEYMENDSILKFDEYFFVLDKNY 144 (348)
T ss_dssp BCCCSEEEES----------------------------------------SSEEEEEEECCTTCBSSEESSSEESSCSSS
T ss_pred cceEEEEEee----------------------------------------CCeEEEEEeccCCCcHHHHHHHhhhhhhcc
Confidence 9999998732 3578999999975 99888 655
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccC
Q 001059 487 YDHFDKELAWHLFRQIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 565 (1170)
Q Consensus 487 ~~~l~e~~~~~i~~qI~~gL~yLHs-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1170)
...+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||++...... ..
T Consensus 145 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-----------------~~ 207 (348)
T 2pml_X 145 TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK-----------------KI 207 (348)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT-----------------EE
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccc-----------------cc
Confidence 5679999999999999999999999 99999999999999999999999999999864321 11
Q ss_pred cccccCccCCCcccccCCCCCCc-cchhHHHHHHHHHhhc---CCCchhH-HHHHHHHhhhcCCCCCc------------
Q 001059 566 TGQVGTYFYTAPEIEQGWPKIDE-KADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPS------------ 628 (1170)
Q Consensus 566 ~~~~GT~~Y~APE~l~~~~~~~~-ksDIwSlGviL~ELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~------------ 628 (1170)
....||+.|+|||++.+...++. ++|||||||++|||++ ||..... .+............|..
T Consensus 208 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 287 (348)
T 2pml_X 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKK 287 (348)
T ss_dssp CSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--
T ss_pred cCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccc
Confidence 34579999999999988535666 9999999999999997 7776554 33333333322233311
Q ss_pred ----cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHHHHHHH
Q 001059 629 ----WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNI 674 (1170)
Q Consensus 629 ----~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~~~~~~ 674 (1170)
....++++.+||.+||+.||.+|||+.++++||||.......+...
T Consensus 288 ~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~~~~~~~ 337 (348)
T 2pml_X 288 STCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREF 337 (348)
T ss_dssp ------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCHHHHHHH
T ss_pred cccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCHHHHHHH
Confidence 1456789999999999999999999999999999999876655444
No 172
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=371.80 Aligned_cols=251 Identities=21% Similarity=0.285 Sum_probs=202.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~-----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++++.||+|+||+||+|++ ..+++.||||+++. .........+.+|+.+++.++||||+++++++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--- 145 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ--- 145 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCS-SCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccc-ccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec---
Confidence 47899999999999999999994 45678999999863 3344455678999999999999999999998733
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-------CCCHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------HFDKELAWHLFR 500 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------~l~e~~~~~i~~ 500 (1170)
....|+|||||+ ++|.+++.... .+++..++.++.
T Consensus 146 -------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~ 188 (367)
T 3l9p_A 146 -------------------------------------SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 188 (367)
T ss_dssp -------------------------------------SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHH
T ss_pred -------------------------------------CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHH
Confidence 234589999996 59999997643 489999999999
Q ss_pred HHHHHHHHHHhCCccccCCCCCceeecCCC---CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 501 qI~~gL~yLHs~gIiHrDLKp~NILi~~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
||+.||+|||++||+||||||+|||++.++ .+||+|||+|+........ .......||+.|+||
T Consensus 189 qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~-------------~~~~~~~~t~~y~aP 255 (367)
T 3l9p_A 189 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY-------------RKGGCAMLPVKWMPP 255 (367)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSC-------------TTCCGGGSCGGGCCH
T ss_pred HHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccccccccc-------------ccCCCcCCcccEECH
Confidence 999999999999999999999999999555 5999999999866432211 112345789999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
|++.+ ..++.++|||||||++|||++ ||......+....... +..+......++.+.+||.+||+.||.+|||
T Consensus 256 E~~~~-~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps 332 (367)
T 3l9p_A 256 EAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 332 (367)
T ss_dssp HHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCCCCCCccCCHHHHHHHHHHcCCCHhHCcC
Confidence 99987 569999999999999999996 7766555544433332 2223333456789999999999999999999
Q ss_pred HHHHHhcc
Q 001059 654 ATELLQDA 661 (1170)
Q Consensus 654 a~eiL~~~ 661 (1170)
+.+++++.
T Consensus 333 ~~eil~~l 340 (367)
T 3l9p_A 333 FAIILERI 340 (367)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 173
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.2e-38 Score=360.51 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=204.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc--CCCceeEEEEEeecCcccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ--HQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~--HpnIV~l~~~~~e~~~~~~ 431 (1170)
.++|++++.||+|+||.||+|.+. +|+.||||++............+.+|+.++++++ ||||+++++++..
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~------ 99 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT------ 99 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC------
T ss_pred cceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec------
Confidence 357999999999999999999986 6899999999876666666778999999999997 5999999988733
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++||+++++|.+++.....+++..++.++.||+.||+|||+
T Consensus 100 ----------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~ 145 (313)
T 3cek_A 100 ----------------------------------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145 (313)
T ss_dssp ----------------------------------SSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999998788999999988899999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--------
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-------- 583 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-------- 583 (1170)
+||+||||||+|||++ ++.+||+|||+++....... ........||+.|+|||++.+.
T Consensus 146 ~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 211 (313)
T 3cek_A 146 HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211 (313)
T ss_dssp TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC---------------------------CCGGGCCHHHHTTCC-------
T ss_pred CCceecCCCcccEEEE-CCeEEEeeccccccccCccc-------------cccccCCCCCCCcCCHHHHhhccccccccc
Confidence 9999999999999996 48999999999986532210 0112345799999999998752
Q ss_pred --CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 584 --PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 584 --~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
..++.++|||||||++|+|++ ||..........................++++.+||.+||+.||.+|||+.+++
T Consensus 212 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 291 (313)
T 3cek_A 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291 (313)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred ccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHh
Confidence 357889999999999999996 776543322222222222222222233467899999999999999999999999
Q ss_pred hccCCCCch
Q 001059 659 QDALPPQME 667 (1170)
Q Consensus 659 ~~~~~~~~~ 667 (1170)
+|+|+....
T Consensus 292 ~h~~~~~~~ 300 (313)
T 3cek_A 292 AHPYVQIQT 300 (313)
T ss_dssp TSHHHHCC-
T ss_pred cCccccCCC
Confidence 999987654
No 174
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=359.38 Aligned_cols=257 Identities=24% Similarity=0.395 Sum_probs=192.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++++.||+|+||.||+|+++.+|+.||||++............+.++..+++.++||||+++++++.+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-------- 95 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-------- 95 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--------
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec--------
Confidence 578999999999999999999999999999999998654433333444555567888899999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||+++.+..+... ...+++..++.++.||+.||.|||++
T Consensus 96 --------------------------------~~~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 143 (318)
T 2dyl_A 96 --------------------------------NTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143 (318)
T ss_dssp --------------------------------SSEEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 356899999997666666543 46799999999999999999999995
Q ss_pred -CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCC
Q 001059 513 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 587 (1170)
Q Consensus 513 -gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~ 587 (1170)
||+||||||+|||++.++.+||+|||++....... ......||+.|+|||++.+ ...++
T Consensus 144 ~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~ 207 (318)
T 2dyl_A 144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK----------------AKDRSAGCAAYMAPERIDPPDPTKPDYD 207 (318)
T ss_dssp HCCCCCCCCGGGEEECTTSCEEECCCTTC------------------------------CCTTCCHHHHC--------CC
T ss_pred CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc----------------cccccCCCccccChhhcccccccccCCc
Confidence 99999999999999999999999999997653211 1123479999999999852 24588
Q ss_pred ccchhHHHHHHHHHhhc---CCCchh-HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAM-ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~-~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.++|||||||++|+|++ ||.... ..+.............+.....++++.+||.+||+.||.+|||+.++++|+|+
T Consensus 208 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~ 287 (318)
T 2dyl_A 208 IRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287 (318)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHH
T ss_pred cccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHH
Confidence 99999999999999997 776532 33333333333333333344577899999999999999999999999999988
Q ss_pred CCc
Q 001059 664 PQM 666 (1170)
Q Consensus 664 ~~~ 666 (1170)
.+.
T Consensus 288 ~~~ 290 (318)
T 2dyl_A 288 KRY 290 (318)
T ss_dssp HHH
T ss_pred Hhc
Confidence 654
No 175
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.9e-38 Score=358.54 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=201.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|.+.+.||+|+||+||+|.+. ..+|+|+++....+....+.+.+|+.+|+.++||||+++++++.
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------- 102 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT--------- 102 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---------
T ss_pred ccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc---------
Confidence 578999999999999999999875 35999998876666666788999999999999999999998762
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~-~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+++|||||+ ++|.+++. ....+++..++.++.||+.||+|||+
T Consensus 103 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~ 150 (307)
T 3lb7_A 103 --------------------------------KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 150 (307)
T ss_dssp --------------------------------SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------cCcEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 233689999997 59999887 44579999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCcc
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEK 589 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~k 589 (1170)
+||+||||||+|||++.++.+||+|||+|+....... ........||+.|+|||++.. ...++.+
T Consensus 151 ~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 217 (307)
T 3lb7_A 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-------------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQ 217 (307)
T ss_dssp TTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------------------------CCCCTTSCCHHHHHCCSSCCCCHH
T ss_pred CCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc-------------cccccCCCCCcceECcceeeccCCCCCCch
Confidence 9999999999999999999999999999985432110 011234579999999999862 2458899
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC---CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~---p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
+|||||||++|||++ ||......+............ +.....+++++.+||.+||+.||.+|||+.+++++.
T Consensus 218 ~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l 295 (307)
T 3lb7_A 218 SDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI 295 (307)
T ss_dssp HHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHH
Confidence 999999999999997 887655544444333322222 223456778999999999999999999999999863
No 176
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.4e-38 Score=349.95 Aligned_cols=246 Identities=22% Similarity=0.375 Sum_probs=203.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|++. +++.||+|++...... .+.+.+|+.++++++||||+++++++.+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 76 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLE-------- 76 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS--------
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEec--------
Confidence 368999999999999999999997 6788999999754333 4578999999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||+
T Consensus 77 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 124 (269)
T 4hcu_A 77 --------------------------------QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 124 (269)
T ss_dssp --------------------------------SSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHh
Confidence 345799999997 5899998654 459999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++........ ......||+.|+|||++.+ ..++.++|
T Consensus 125 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 189 (269)
T 4hcu_A 125 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT--------------SSTGTKFPVKWASPEVFSF-SRYSSKSD 189 (269)
T ss_dssp TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH--------------STTSTTCCGGGCCHHHHHH-CCCCHHHH
T ss_pred CCeecCCcchheEEEcCCCCEEeccccccccccccccc--------------cccCcccccccCCHHHhcC-CCCCchhh
Confidence 99999999999999999999999999999865432211 1233467889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||+++|+|++ ||......+........ ..+......++++.++|.+||+.||.+|||+.+++++
T Consensus 190 i~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 190 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG--FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT--CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC--ccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 9999999999986 77665555544443322 2222334457899999999999999999999999986
No 177
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.8e-38 Score=369.60 Aligned_cols=256 Identities=23% Similarity=0.348 Sum_probs=202.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-----------CCCceeEEEE
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----------HQHVVRYYQA 422 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-----------HpnIV~l~~~ 422 (1170)
.++|++.+.||+|+||+||+|++..+|+.||||++.. .......+.+|+.+++.++ ||||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 4789999999999999999999999999999999863 3334567889999999886 8999999998
Q ss_pred EeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHH
Q 001059 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFR 500 (1170)
Q Consensus 423 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~ 500 (1170)
+...+ .....++++|||++++|.+++... ..+++..++.++.
T Consensus 95 ~~~~~------------------------------------~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~ 138 (373)
T 1q8y_A 95 FNHKG------------------------------------PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138 (373)
T ss_dssp EEEEE------------------------------------TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred hhccC------------------------------------CCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHH
Confidence 85421 123578999999988999998763 4599999999999
Q ss_pred HHHHHHHHHHhC-CccccCCCCCceeec------CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 001059 501 QIVEGLAHIHGQ-GIIHRDLTPNNIFFD------ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573 (1170)
Q Consensus 501 qI~~gL~yLHs~-gIiHrDLKp~NILi~------~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 573 (1170)
||+.||+|||++ ||+||||||+|||++ ..+.+||+|||+++..... .+...||+.
T Consensus 139 qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~------------------~~~~~~t~~ 200 (373)
T 1q8y_A 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH------------------YTNSIQTRE 200 (373)
T ss_dssp HHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC------------------CCSCCSCGG
T ss_pred HHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC------------------CCCCCCCcc
Confidence 999999999998 999999999999994 3447999999999864311 134579999
Q ss_pred CCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchh------HHHHHHHHhhhcCCCCCc----------------
Q 001059 574 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAM------ERQIVLSDLKQKGELPPS---------------- 628 (1170)
Q Consensus 574 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~------~~~~~~~~l~~~~~~p~~---------------- 628 (1170)
|+|||++.+ ..++.++|||||||++|||++ ||.... ............+..|..
T Consensus 201 y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 279 (373)
T 1q8y_A 201 YRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG 279 (373)
T ss_dssp GCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--
T ss_pred ccCcHHHhC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcc
Confidence 999999988 568999999999999999997 776432 112222222212222211
Q ss_pred -----------------------cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 629 -----------------------WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 629 -----------------------~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
....++++.+||.+||+.||.+|||+.++|+||||.+..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 341 (373)
T 1q8y_A 280 LLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 341 (373)
T ss_dssp CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred hhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence 112345788999999999999999999999999998753
No 178
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.6e-38 Score=363.16 Aligned_cols=254 Identities=20% Similarity=0.255 Sum_probs=202.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++.+.||+|+||+||+|++..+|+.||||++..... ...+.+|+.+++.+ +||||+++++++..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~------ 76 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPC------ 76 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEE------
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEec------
Confidence 34789999999999999999999999999999999975432 23578999999999 99999999988733
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....|+|||||+++|.+++... ..+++..++.++.||+.||+|||
T Consensus 77 ----------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 122 (330)
T 2izr_A 77 ----------------------------------GKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH 122 (330)
T ss_dssp ----------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3578999999988999999864 67999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCC-----EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~-----vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
++||+||||||+|||++.++. +||+|||+++.+......... ........+||+.|+|||++.+ ..
T Consensus 123 ~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~-~~ 193 (330)
T 2izr_A 123 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHI--------PYREHKSLTGTARYMSINTHLG-KE 193 (330)
T ss_dssp HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBC--------CCCCCCCCCSCTTTCCHHHHTT-CC
T ss_pred hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccc--------cccccCCcCCCccccChHHHcC-CC
Confidence 999999999999999998887 999999999875432211100 0112345689999999999998 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchh---HHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAM---ERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~---~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
++.++|||||||++|||++ ||.... ..+....+.......+. ......|++.++|.+||+.||.+||++.+|+
T Consensus 194 ~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~ 273 (330)
T 2izr_A 194 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLR 273 (330)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred CCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHH
Confidence 8999999999999999997 786532 22222222221222221 2223345899999999999999999999998
Q ss_pred h
Q 001059 659 Q 659 (1170)
Q Consensus 659 ~ 659 (1170)
+
T Consensus 274 ~ 274 (330)
T 2izr_A 274 K 274 (330)
T ss_dssp H
T ss_pred H
Confidence 6
No 179
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.8e-38 Score=349.17 Aligned_cols=246 Identities=25% Similarity=0.392 Sum_probs=202.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||.||+|.++ ++..||+|+++..... ...+.+|+.++++++||||++++++|..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 74 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSK-------- 74 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCc---HHHHHHHHHHHHhCCCCCEeeEEEEEcc--------
Confidence 478999999999999999999887 6778999999754333 4568999999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 122 (268)
T 3sxs_A 75 --------------------------------EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES 122 (268)
T ss_dssp --------------------------------SSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 58999987654 59999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||++....... ........+|+.|+|||++.+ ..++.++|
T Consensus 123 ~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 187 (268)
T 3sxs_A 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ--------------YVSSVGTKFPVKWSAPEVFHY-FKYSSKSD 187 (268)
T ss_dssp TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC--------------EEECCSCCCCGGGCCHHHHHH-SEEETTHH
T ss_pred CCeecCCcCcceEEECCCCCEEEccCccceecchhh--------------hhcccCCCcCcccCCHHHHhc-cCCchhhh
Confidence 999999999999999999999999999998653221 111234467889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||+++|+|++ ||................ .+......++++.++|.+||+.||.+|||+.+++++
T Consensus 188 i~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH--RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC--CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCC--CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999996 777665555544443322 222223456789999999999999999999999986
No 180
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-38 Score=362.15 Aligned_cols=250 Identities=20% Similarity=0.310 Sum_probs=205.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++.+.||+|+||.||+|++. .+++.||||+++.. ........+.+|+.+++.++||||++++++|.+
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 121 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVKLLGVCAV--- 121 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc---
Confidence 478999999999999999999997 35589999998743 344456789999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 487 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 487 (1170)
...+|+|||||+ ++|.+++...
T Consensus 122 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T 1luf_A 122 -------------------------------------GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164 (343)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHHTCC------------------
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHHhCccccccccccccccccccc
Confidence 345699999997 4999998763
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccc
Q 001059 488 ----DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 563 (1170)
Q Consensus 488 ----~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 563 (1170)
..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ .
T Consensus 165 ~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------~ 231 (343)
T 1luf_A 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-------------K 231 (343)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB-------------C
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccc-------------c
Confidence 56999999999999999999999999999999999999999999999999999876432211 1
Q ss_pred cCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHH
Q 001059 564 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 639 (1170)
Q Consensus 564 ~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~L 639 (1170)
......||+.|+|||++.+ ..++.++|||||||++|||++ ||......+...... .+..+......++++.+|
T Consensus 232 ~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l 308 (343)
T 1luf_A 232 ADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR--DGNILACPENCPLELYNL 308 (343)
T ss_dssp ----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH--TTCCCCCCTTCCHHHHHH
T ss_pred ccCCCcccceecChhhhcc-CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHh--CCCcCCCCCCCCHHHHHH
Confidence 1233568999999999987 568999999999999999996 776655554443333 233333344667899999
Q ss_pred HHHccCCCCCCCCCHHHHHhc
Q 001059 640 LRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~ 660 (1170)
|++||+.||.+|||+.+++++
T Consensus 309 i~~~l~~~p~~Rps~~~~~~~ 329 (343)
T 1luf_A 309 MRLCWSKLPADRPSFCSIHRI 329 (343)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcccCcccCCCHHHHHHH
Confidence 999999999999999999875
No 181
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.6e-38 Score=348.66 Aligned_cols=248 Identities=19% Similarity=0.244 Sum_probs=207.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...++|++.+.||+|+||+||+|++. |+.||||+++....+....+.+.+|+.++++++||||++++++|.+.
T Consensus 7 i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 79 (271)
T 3kmu_A 7 IDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP----- 79 (271)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT-----
T ss_pred CCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC-----
Confidence 34578999999999999999999985 89999999987766666677899999999999999999999987432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|++||||+ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 80 ---------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~ 126 (271)
T 3kmu_A 80 ---------------------------------PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126 (271)
T ss_dssp ---------------------------------TSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHH
Confidence 1246799999997 59999998765 48999999999999999999
Q ss_pred HHhCC--ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC--
Q 001059 509 IHGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-- 584 (1170)
Q Consensus 509 LHs~g--IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-- 584 (1170)
||++| |+||||||+|||++.++.++|+|||++.... .....||+.|+|||++.+..
T Consensus 127 lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~--------------------~~~~~~t~~y~aPE~~~~~~~~ 186 (271)
T 3kmu_A 127 LHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ--------------------SPGRMYAPAWVAPEALQKKPED 186 (271)
T ss_dssp HTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS--------------------CTTCBSCGGGSCHHHHHSCGGG
T ss_pred HhcCCCceecCCCccceEEEcCCcceeEEeccceeeec--------------------ccCccCCccccChhhhccCCCC
Confidence 99999 9999999999999999999999999876421 13357899999999998732
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++.++|||||||++|||++ ||.............. ....+......++++.++|.+||+.||.+|||+.++++.
T Consensus 187 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (271)
T 3kmu_A 187 TNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL-EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPI 264 (271)
T ss_dssp SCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHH-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 23348999999999999997 8876665555444443 333444445677899999999999999999999999864
No 182
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=353.40 Aligned_cols=257 Identities=26% Similarity=0.364 Sum_probs=202.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|.....||+|+||.||+|.+..+++.||||+++... ....+.+.+|+.+++.++||||++++++|.+
T Consensus 21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 90 (295)
T 2clq_A 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-------- 90 (295)
T ss_dssp BCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEE--------
T ss_pred ccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe--------
Confidence 345566678999999999999999999999999997543 2345678999999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+||
T Consensus 91 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~l 138 (295)
T 2clq_A 91 --------------------------------NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 138 (295)
T ss_dssp --------------------------------TTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHH
Confidence 356899999996 59999887642 467899999999999999999
Q ss_pred HhCCccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCC
Q 001059 510 HGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKID 587 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~ 587 (1170)
|++||+||||||+|||++. ++.+||+|||+++...... .......||+.|+|||++.+. ..++
T Consensus 139 H~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 203 (295)
T 2clq_A 139 HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN---------------PCTETFTGTLQYMAPEIIDKGPRGYG 203 (295)
T ss_dssp HHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--------------------CCCCCCGGGCCHHHHHHGGGGCS
T ss_pred HhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC---------------CcccccCCCccccChhhhcCCCCCCC
Confidence 9999999999999999987 8999999999998643211 012345799999999998753 2378
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
.++|||||||++|+|++ ||...................+......++++.+||.+||+.||.+|||+.++++|+|+.
T Consensus 204 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~ 283 (295)
T 2clq_A 204 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGC
T ss_pred cHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence 99999999999999997 776543322222221112223333445678999999999999999999999999999998
Q ss_pred Cch
Q 001059 665 QME 667 (1170)
Q Consensus 665 ~~~ 667 (1170)
...
T Consensus 284 ~~~ 286 (295)
T 2clq_A 284 VSS 286 (295)
T ss_dssp C--
T ss_pred hcc
Confidence 654
No 183
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.1e-38 Score=362.12 Aligned_cols=264 Identities=19% Similarity=0.250 Sum_probs=187.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|++.+.||+|+||+||+|++..++. .||||+++.........+.+.+|+.+++.++||||+++++++.....
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-- 99 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA-- 99 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc--
Confidence 3689999999999999999999987765 89999997655455567789999999999999999999998854310
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcC------CCCHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD------HFDKELAWHLFRQIV 503 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~------~l~e~~~~~i~~qI~ 503 (1170)
.......|++||||++ +|.+++.... .+++..++.++.||+
T Consensus 100 --------------------------------~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~ 147 (323)
T 3qup_A 100 --------------------------------KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIA 147 (323)
T ss_dssp -------------------------------------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHH
T ss_pred --------------------------------ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHH
Confidence 0112345899999974 9999886433 599999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
.||+|||++||+||||||+|||++.++.+||+|||+++....... ........+|+.|+|||++.+
T Consensus 148 ~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~- 213 (323)
T 3qup_A 148 CGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY-------------YRQGCASKLPVKWLALESLAD- 213 (323)
T ss_dssp HHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------------------------CCGGGCCHHHHHH-
T ss_pred HHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecccccccccccc-------------ccccccccCcccccCchhhcC-
Confidence 999999999999999999999999999999999999986533221 111233467889999999987
Q ss_pred CCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC------
Q 001059 584 PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ 653 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt------ 653 (1170)
..++.++|||||||++|||++ ||......+....... ...++.....++++.+||.+||+.||.+|||
T Consensus 214 ~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 291 (323)
T 3qup_A 214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG--GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRM 291 (323)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT--TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc--CCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 568999999999999999986 6665544444333332 2233344566789999999999999999999
Q ss_pred -HHHHHhccCCCCch
Q 001059 654 -ATELLQDALPPQME 667 (1170)
Q Consensus 654 -a~eiL~~~~~~~~~ 667 (1170)
++++++|+|+....
T Consensus 292 ~l~~~l~~~~~~~~~ 306 (323)
T 3qup_A 292 ELENILGHLSVLSTS 306 (323)
T ss_dssp HHHHHHHC-------
T ss_pred HHHHHHHHhhhcCCC
Confidence 45556666666554
No 184
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-37 Score=350.50 Aligned_cols=256 Identities=18% Similarity=0.201 Sum_probs=203.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++.+.||+|+||+||+|++..+|+.||||++..... ...+.+|+.+++.+ +||||+++++++.+
T Consensus 7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~----- 77 (298)
T 1csn_A 7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQE----- 77 (298)
T ss_dssp EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEE-----
T ss_pred ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCC-----
Confidence 345789999999999999999999999999999999874432 23578899999999 89999999987632
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|+||||++++|.+++...+ .+++..++.++.||+.||+||
T Consensus 78 -----------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l 122 (298)
T 1csn_A 78 -----------------------------------GLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI 122 (298)
T ss_dssp -----------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CceeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence 45789999999889999998654 599999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCC-----EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 510 HGQGIIHRDLTPNNIFFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~-----vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
|++||+||||||+|||++.++. +||+|||+++........... .........||+.|+|||++.+ .
T Consensus 123 H~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~-~ 193 (298)
T 1csn_A 123 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHI--------PYREKKNLSGTARYMSINTHLG-R 193 (298)
T ss_dssp HTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBC--------CCCCCCCCCSCTTTCCHHHHTT-C
T ss_pred HhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccc--------cccCccCCCCCcccCCchhhcC-C
Confidence 9999999999999999987776 999999999876432211100 0012345689999999999987 5
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchh---HHHHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAM---ERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~---~~~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
.++.++|||||||++|||++ ||.... ..+........ ....+......++++.+||.+||+.||.+|||+.+
T Consensus 194 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~ 273 (298)
T 1csn_A 194 EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDY 273 (298)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHH
Confidence 68999999999999999997 776531 22222222111 11112223356789999999999999999999999
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
+++.
T Consensus 274 l~~~ 277 (298)
T 1csn_A 274 LQGL 277 (298)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9864
No 185
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1e-37 Score=349.42 Aligned_cols=246 Identities=20% Similarity=0.355 Sum_probs=200.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||+||+|.+. ++..||||+++..... .+.+.+|+.+++.++||||++++++|.+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 90 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTK-------- 90 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS--------
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEec--------
Confidence 478999999999999999999887 6788999999754333 4578999999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 91 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 138 (283)
T 3gen_A 91 --------------------------------QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 138 (283)
T ss_dssp --------------------------------SSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 699999876 5679999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++.+ ..++.++|
T Consensus 139 ~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 203 (283)
T 3gen_A 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT--------------SSVGSKFPVRWSPPEVLMY-SKFSSKSD 203 (283)
T ss_dssp TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH--------------STTSTTSCGGGCCHHHHHH-CCCSHHHH
T ss_pred CCccCCCCccceEEEcCCCCEEEccccccccccccccc--------------cccCCccCcccCCHHHhcc-CCCCchhh
Confidence 99999999999999999999999999999865432211 1233467889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||+++|+|++ ||............... ..+......++.+.++|.+||+.||.+|||+.+++++
T Consensus 204 v~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 204 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG--LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT--CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc--cCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999986 77765555444443332 2222233456789999999999999999999999986
No 186
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.8e-38 Score=371.87 Aligned_cols=250 Identities=22% Similarity=0.325 Sum_probs=203.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|+++.+|+.||||+++.. ........+.+|+.+|+.++||||+++++++..
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 183 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-------- 183 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS--------
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec--------
Confidence 46899999999999999999999999999999998743 333445578899999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++...+ .+++..++.++.||+.||+|||+
T Consensus 184 --------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 231 (377)
T 3cbl_A 184 --------------------------------KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231 (377)
T ss_dssp --------------------------------SSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345699999996 69999987654 59999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++........ .......+|+.|+|||++.+ ..++.++|
T Consensus 232 ~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 297 (377)
T 3cbl_A 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA-------------ASGGLRQVPVKWTAPEALNY-GRYSSESD 297 (377)
T ss_dssp TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE-------------CCSSCCEEEGGGSCHHHHHH-CEEEHHHH
T ss_pred CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee-------------ecCCCCCCCcCcCCHhHhcc-CCCCchhh
Confidence 99999999999999999999999999999754221100 01122346788999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||++|||++ ||......+.... +. .+..++....+++++.+||.+||+.||.+|||+.++++.
T Consensus 298 vwslG~il~el~t~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 368 (377)
T 3cbl_A 298 VWSFGILLWETFSLGASPYPNLSNQQTREF-VE-KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQE 368 (377)
T ss_dssp HHHHHHHHHHHHTTSCCSSTTSCHHHHHHH-HH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 9999999999996 7766554443322 22 233333344567899999999999999999999999864
No 187
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.5e-38 Score=362.32 Aligned_cols=256 Identities=26% Similarity=0.393 Sum_probs=185.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHH-HHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~-iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||.||+|.++.+|+.||||+++.... ......+.+|+. +++.++||||+++++++..
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~------- 92 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR------- 92 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-------
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-------
Confidence 4789999999999999999999999999999999975433 334455666666 6777899999999998843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-----YDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-----~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|+|||||+++|.+++.. ...+++..++.++.|++.||.
T Consensus 93 ---------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~ 139 (327)
T 3aln_A 93 ---------------------------------EGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139 (327)
T ss_dssp ---------------------------------SSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHH
Confidence 356899999999998887763 567999999999999999999
Q ss_pred HHHhC-CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC---C
Q 001059 508 HIHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG---W 583 (1170)
Q Consensus 508 yLHs~-gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~ 583 (1170)
|||++ ||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.. .
T Consensus 140 ~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~ 203 (327)
T 3aln_A 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI----------------AKTRDAGCRPYMAPERIDPSASR 203 (327)
T ss_dssp HHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--------------------------------------------
T ss_pred HHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc----------------ccccCCCCccccCceeeccccCc
Confidence 99999 99999999999999999999999999997653211 1123479999999999842 2
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC----CccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----PSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p----~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
..++.++|||||||++|+|++ ||.............. .+..+ ......++++.+||.+||+.||.+|||+.+
T Consensus 204 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e 282 (327)
T 3aln_A 204 QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV-KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKE 282 (327)
T ss_dssp --CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCC-CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHh-cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHH
Confidence 458999999999999999997 7765433222111111 11111 122356789999999999999999999999
Q ss_pred HHhccCCCCch
Q 001059 657 LLQDALPPQME 667 (1170)
Q Consensus 657 iL~~~~~~~~~ 667 (1170)
+++|||+....
T Consensus 283 ll~hp~~~~~~ 293 (327)
T 3aln_A 283 LLKHPFILMYE 293 (327)
T ss_dssp HTTSHHHHHHH
T ss_pred HHhChHHHHhH
Confidence 99999986543
No 188
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=9.6e-38 Score=352.69 Aligned_cols=254 Identities=24% Similarity=0.396 Sum_probs=200.6
Q ss_pred cCCceEEeeeccCCcEEEEEEE----EccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~----~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+.|++++.||+|+||.||+|+ +..+|+.||||+++... .......+.+|+.+|+.++||||++++++|.+.
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 95 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTED--- 95 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC---
Confidence 4679999999999999999999 46689999999997543 223456789999999999999999999988542
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....+|+|||||+ ++|.+++.. ...+++..++.++.||+.||+
T Consensus 96 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~ 140 (302)
T 4e5w_A 96 -----------------------------------GGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMD 140 (302)
T ss_dssp -------------------------------------CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHH
Confidence 1345799999996 499999954 456999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++....... .........||+.|+|||++.+ ..++
T Consensus 141 ~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~ 207 (302)
T 4e5w_A 141 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE------------YYTVKDDRDSPVFWYAPECLMQ-SKFY 207 (302)
T ss_dssp HHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCC------------EEECCCCTTCCGGGCCHHHHHH-CEEE
T ss_pred HhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCc------------ceeccCCCCCCccccCCeeecC-CCCC
Confidence 99999999999999999999999999999999986532210 0112234578999999999987 5688
Q ss_pred ccchhHHHHHHHHHhhc---CC--------------CchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCC
Q 001059 588 EKADMYSLGIVFFELWH---PF--------------STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf--------------~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
.++|||||||++|+|++ |+ ............+. .....+.....++++.+||.+||+.||.+
T Consensus 208 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 286 (302)
T 4e5w_A 208 IASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK-EGKRLPCPPNCPDEVYQLMRKCWEFQPSN 286 (302)
T ss_dssp HHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHTTCSSGGG
T ss_pred cchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHcCCCCCC
Confidence 99999999999999997 22 22222222233332 23333344567789999999999999999
Q ss_pred CCCHHHHHhc
Q 001059 651 RPSATELLQD 660 (1170)
Q Consensus 651 RPta~eiL~~ 660 (1170)
|||+.++++.
T Consensus 287 Rps~~~ll~~ 296 (302)
T 4e5w_A 287 RTSFQNLIEG 296 (302)
T ss_dssp SCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999999874
No 189
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.8e-38 Score=354.71 Aligned_cols=243 Identities=19% Similarity=0.291 Sum_probs=199.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC-------cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeec
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDG-------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFET 426 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg-------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~ 426 (1170)
.++|++.+.||+|+||+||+|+++.++ ..||+|++... .....+.+.+|+.+++.++||||++++++|.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVC- 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC-
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe-
Confidence 478999999999999999999998877 47999998643 23345789999999999999999999998833
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC-CCHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH-FDKELAWHLFRQIVE 504 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~-l~e~~~~~i~~qI~~ 504 (1170)
....|+|||||+ ++|.+++..... +++..++.++.||+.
T Consensus 84 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 124 (289)
T 4fvq_A 84 ---------------------------------------GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAA 124 (289)
T ss_dssp ---------------------------------------TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 234589999997 699999987654 999999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecCCCC--------EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDARND--------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~~~--------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
||+|||++||+||||||+|||++.++. +||+|||++...... ....||+.|+|
T Consensus 125 ~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------------~~~~~~~~y~a 185 (289)
T 4fvq_A 125 AMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK-------------------DILQERIPWVP 185 (289)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH-------------------HHHHHTTTTSC
T ss_pred HHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc-------------------cccCCcCcccC
Confidence 999999999999999999999998887 999999999754211 23468899999
Q ss_pred cccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 577 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 577 PE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
||++.+...++.++|||||||++|||++ |+...................+.. .++++.+||.+||+.||.+|||
T Consensus 186 PE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps 262 (289)
T 4fvq_A 186 PECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAP---KAAELANLINNCMDYEPDHRPS 262 (289)
T ss_dssp HHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---SSCTTHHHHHHHSCSSGGGSCC
T ss_pred HHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCC---CCHHHHHHHHHHcCCChhHCcC
Confidence 9999874568999999999999999997 333333333333333333333432 3457899999999999999999
Q ss_pred HHHHHhc
Q 001059 654 ATELLQD 660 (1170)
Q Consensus 654 a~eiL~~ 660 (1170)
+.+++++
T Consensus 263 ~~~ll~~ 269 (289)
T 4fvq_A 263 FRAIIRD 269 (289)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999986
No 190
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4.5e-38 Score=352.36 Aligned_cols=248 Identities=23% Similarity=0.335 Sum_probs=192.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|++.+.||+|+||+||+|.+..+ +..||+|+++.. ......+.+.+|+.+++.++||||+++++++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 86 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------
Confidence 47899999999999999999999754 457999988643 33445678999999999999999999998862
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||++ +|.+++.... .+++..++.++.||+.||+|
T Consensus 87 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~ 131 (281)
T 1mp8_A 87 -----------------------------------ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 131 (281)
T ss_dssp -----------------------------------SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 1235899999975 9999987654 69999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.
T Consensus 132 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~ 196 (281)
T 1mp8_A 132 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY--------------YKASKGKLPIKWMAPESINF-RRFTS 196 (281)
T ss_dssp HHHTTCCCSCCSGGGEEEEETTEEEECC---------------------------------CCGGGCCHHHHHH-CCCSH
T ss_pred HHhCCeecccccHHHEEECCCCCEEECccccccccCcccc--------------cccccCCCcccccChhhccc-CCCCC
Confidence 9999999999999999999999999999999987532211 11233467889999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||++ ||......+...... ....++.....++++.++|.+||+.||.+|||+.+++++
T Consensus 197 ~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 270 (281)
T 1mp8_A 197 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE--NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 270 (281)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999985 776554443333322 223333445677899999999999999999999999875
No 191
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=5.4e-38 Score=365.81 Aligned_cols=261 Identities=17% Similarity=0.278 Sum_probs=197.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhh---------HHHHHHHHHHHHhccCCCceeE
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPV---------NDRILREVATLSRLQHQHVVRY 419 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~---------~~~~~~Ev~iL~~l~HpnIV~l 419 (1170)
.++|++.+.||+|+||+||+|.++.+ ++.||||++......... ...+.+|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 35899999999999999999999764 578999998754311000 1134456667778889999999
Q ss_pred EEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHH
Q 001059 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHL 498 (1170)
Q Consensus 420 ~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i 498 (1170)
++++.... ....++|+|||||+++|.+++... ..+++..++.+
T Consensus 114 ~~~~~~~~------------------------------------~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i 157 (364)
T 3op5_A 114 WGSGLHDK------------------------------------NGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQL 157 (364)
T ss_dssp EEEEEEEE------------------------------------TTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHH
T ss_pred Eeeeeecc------------------------------------CCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHH
Confidence 99985431 123678999999977999999875 57999999999
Q ss_pred HHHHHHHHHHHHhCCccccCCCCCceeec--CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 001059 499 FRQIVEGLAHIHGQGIIHRDLTPNNIFFD--ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 499 ~~qI~~gL~yLHs~gIiHrDLKp~NILi~--~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
+.||+.||+|||++||+||||||+|||++ .++.+||+|||+|+.+......... ........+||+.|+|
T Consensus 158 ~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~a 229 (364)
T 3op5_A 158 SLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAY--------AADPKRCHDGTIEFTS 229 (364)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCS--------SCCSSCCCCCCTTTCC
T ss_pred HHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCccccc--------ccCcccccCCCCCccC
Confidence 99999999999999999999999999999 8899999999999876433211100 0111244579999999
Q ss_pred cccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhh--cCCCCCc------cccCCHHHHHHHHHccC
Q 001059 577 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPPS------WVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 577 PE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~--~~~~p~~------~~~~~~e~~~LI~~~L~ 645 (1170)
||++.+ ..++.++|||||||++|||++ ||............... ...++.. ....++++.++|.+||+
T Consensus 230 PE~~~~-~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 308 (364)
T 3op5_A 230 IDAHNG-VAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKL 308 (364)
T ss_dssp HHHHTT-CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHT
T ss_pred HHHhCC-CCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhc
Confidence 999988 568999999999999999997 88753322221111110 0011100 13456799999999999
Q ss_pred CCCCCCCCHHHHHh
Q 001059 646 PSPSDRPSATELLQ 659 (1170)
Q Consensus 646 ~dP~~RPta~eiL~ 659 (1170)
.||.+||++.+|++
T Consensus 309 ~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 309 LDYTEKPLYENLRD 322 (364)
T ss_dssp CCTTCCCCHHHHHH
T ss_pred CCCCCCCCHHHHHH
Confidence 99999999999986
No 192
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-37 Score=354.56 Aligned_cols=255 Identities=25% Similarity=0.327 Sum_probs=197.2
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.+..+++|++.+.||+|+||.||+|++..+|+.||||++..... .....+.+.+|+.+++.++||||+++++++..
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~--- 105 (309)
T 2h34_A 29 EGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI--- 105 (309)
T ss_dssp -----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE---
T ss_pred CCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee---
Confidence 45567899999999999999999999999999999999875432 23345778999999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|++|||+++ +|.+++.....+++..++.++.||+.||+
T Consensus 106 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~ 148 (309)
T 2h34_A 106 -------------------------------------DGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALD 148 (309)
T ss_dssp -------------------------------------TTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 3568999999975 99999998888999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||++........ .......||+.|+|||++.+ ..++
T Consensus 149 ~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~ 213 (309)
T 2h34_A 149 AAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL--------------TQLGNTVGTLYYMAPERFSE-SHAT 213 (309)
T ss_dssp HHHHTTCCCSCCCGGGEEECTTSCEEECSCCC------------------------------CCGGGCCGGGTCC-----
T ss_pred HHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccc--------------ccccccCCCcCccCHHHHcC-CCCC
Confidence 99999999999999999999999999999999986532210 01234579999999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCC-CHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRP-SATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RP-ta~eiL~~ 660 (1170)
.++||||||+++|+|++ ||........ ...+......+ ......++++.++|.+||+.||.+|| +++++++.
T Consensus 214 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~ 290 (309)
T 2h34_A 214 YRADIYALTCVLYECLTGSPPYQGDQLSVM-GAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAA 290 (309)
T ss_dssp CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH-HHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred chHhHHHHHHHHHHHHHCCCCCCCchHHHH-HHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHH
Confidence 99999999999999997 7876554422 22222222222 22345667899999999999999999 88888763
No 193
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.1e-37 Score=349.76 Aligned_cols=248 Identities=25% Similarity=0.401 Sum_probs=200.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhH-----HHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-----DRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~-----~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
..++|++.+.||+|+||+||+|++..+++.||||++.......... +.+.+|+.+++.++||||+++++++.+
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-- 94 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN-- 94 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT--
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC--
Confidence 3578999999999999999999999999999999987654332222 678999999999999999999988722
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~g 505 (1170)
.. ++||||++ ++|.+.+... ..+++..++.++.||+.|
T Consensus 95 --------------------------------------~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~ 134 (287)
T 4f0f_A 95 --------------------------------------PP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134 (287)
T ss_dssp --------------------------------------TT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHH
T ss_pred --------------------------------------CC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHH
Confidence 11 69999997 6998877644 469999999999999999
Q ss_pred HHHHHhCC--ccccCCCCCceeecCCCC-----EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcc
Q 001059 506 LAHIHGQG--IIHRDLTPNNIFFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578 (1170)
Q Consensus 506 L~yLHs~g--IiHrDLKp~NILi~~~~~-----vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 578 (1170)
|+|||++| |+||||||+|||++.++. +||+|||+++.... ......||+.|+|||
T Consensus 135 l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~------------------~~~~~~g~~~y~aPE 196 (287)
T 4f0f_A 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH------------------SVSGLLGNFQWMAPE 196 (287)
T ss_dssp HHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS------------------CEECCCCCCTTSCGG
T ss_pred HHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc------------------cccccCCCccccCch
Confidence 99999999 999999999999988776 99999999974321 123457999999999
Q ss_pred cccC-CCCCCccchhHHHHHHHHHhhc---CCCchhHHHH-HHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 579 IEQG-WPKIDEKADMYSLGIVFFELWH---PFSTAMERQI-VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 579 ~l~~-~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~-~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
++.+ ...++.++|||||||++|+|++ ||........ ...........+......++++.++|.+||+.||.+|||
T Consensus 197 ~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 276 (287)
T 4f0f_A 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPH 276 (287)
T ss_dssp GSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred hhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcC
Confidence 9843 2447899999999999999997 7765432222 222223334444445567789999999999999999999
Q ss_pred HHHHHhc
Q 001059 654 ATELLQD 660 (1170)
Q Consensus 654 a~eiL~~ 660 (1170)
+.++++.
T Consensus 277 ~~~ll~~ 283 (287)
T 4f0f_A 277 FSYIVKE 283 (287)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 194
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=358.77 Aligned_cols=253 Identities=27% Similarity=0.371 Sum_probs=198.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----hhHHHHHHHHHHHHhc----cCCCceeEEE
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRL----QHQHVVRYYQ 421 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~l----~HpnIV~l~~ 421 (1170)
...+.++|++.+.||+|+||.||+|++..+|+.||||+++...... .....+.+|+.+++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3556789999999999999999999999999999999997543221 1223466799999999 8999999998
Q ss_pred EEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeec-cC-CcHHHHHHhcCCCCHHHHHHHH
Q 001059 422 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY-CP-RTLRQVFESYDHFDKELAWHLF 499 (1170)
Q Consensus 422 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy-~~-gsL~~~l~~~~~l~e~~~~~i~ 499 (1170)
++.. ....+++||| +. ++|.+++.....+++..++.++
T Consensus 106 ~~~~----------------------------------------~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~ 145 (312)
T 2iwi_A 106 WFET----------------------------------------QEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFF 145 (312)
T ss_dssp EC---------------------------------------------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHH
T ss_pred EEec----------------------------------------CCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence 8732 3456899999 55 6999999988889999999999
Q ss_pred HHHHHHHHHHHhCCccccCCCCCceeec-CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcc
Q 001059 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578 (1170)
Q Consensus 500 ~qI~~gL~yLHs~gIiHrDLKp~NILi~-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 578 (1170)
.||+.||+|||++||+||||||+|||++ .++.+||+|||+++...... .....||+.|+|||
T Consensus 146 ~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~-----------------~~~~~~~~~y~aPE 208 (312)
T 2iwi_A 146 GQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP-----------------YTDFDGTRVYSPPE 208 (312)
T ss_dssp HHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC-----------------BCCCCSCTTTSCHH
T ss_pred HHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc-----------------ccccCCcccccCce
Confidence 9999999999999999999999999999 78999999999998653211 13457999999999
Q ss_pred cccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 001059 579 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 655 (1170)
Q Consensus 579 ~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 655 (1170)
++.+...++.++|||||||++|+|++ ||..... .......++ ...++++.+||.+||+.||.+|||+.
T Consensus 209 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~ 279 (312)
T 2iwi_A 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFP---AHVSPDCCALIRRCLAPKPSSRPSLE 279 (312)
T ss_dssp HHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHTCCCCC---TTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred eeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------HhhhccCCc---ccCCHHHHHHHHHHccCChhhCcCHH
Confidence 98874444569999999999999997 6654322 111222233 34567999999999999999999999
Q ss_pred HHHhccCCCCchH
Q 001059 656 ELLQDALPPQMEY 668 (1170)
Q Consensus 656 eiL~~~~~~~~~~ 668 (1170)
++++|+|+.....
T Consensus 280 e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 280 EILLDPWMQTPAE 292 (312)
T ss_dssp HHHHSTTTCC---
T ss_pred HHhcChhhcCchh
Confidence 9999999987654
No 195
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6.5e-38 Score=355.79 Aligned_cols=250 Identities=23% Similarity=0.301 Sum_probs=203.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|.+.+.||+|+||.||+|.+. .++..||||+++.. ......+.+.+|+.+|+.++||||++++++|.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 97 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ--- 97 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec---
Confidence 468999999999999999999983 45689999998743 344556789999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH------------------ 489 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~------------------ 489 (1170)
...+|+|||||+ ++|.+++.....
T Consensus 98 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 140 (314)
T 2ivs_A 98 -------------------------------------DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140 (314)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC------------
T ss_pred -------------------------------------CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccc
Confidence 345699999997 699999976543
Q ss_pred ------CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccc
Q 001059 490 ------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 563 (1170)
Q Consensus 490 ------l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 563 (1170)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ...
T Consensus 141 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~-------------~~~ 207 (314)
T 2ivs_A 141 HPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED-------------SYV 207 (314)
T ss_dssp ----CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTS-------------CEE
T ss_pred cccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccc-------------cce
Confidence 8999999999999999999999999999999999999999999999999998653221 011
Q ss_pred cCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHH
Q 001059 564 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 639 (1170)
Q Consensus 564 ~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~L 639 (1170)
......+|+.|+|||++.+ ..++.++|||||||++|||++ ||.......... .+. ....+......++++.++
T Consensus 208 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l 284 (314)
T 2ivs_A 208 KRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN-LLK-TGHRMERPDNCSEEMYRL 284 (314)
T ss_dssp CSSCCCSCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-HHH-TTCCCCCCTTCCHHHHHH
T ss_pred eccCCCCcccccChhhhcC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-Hhh-cCCcCCCCccCCHHHHHH
Confidence 1234568899999999987 568999999999999999996 665444333322 222 233334445677899999
Q ss_pred HHHccCCCCCCCCCHHHHHhc
Q 001059 640 LRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~ 660 (1170)
|.+||+.||.+|||+.+++++
T Consensus 285 i~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 285 MLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHHH
Confidence 999999999999999999976
No 196
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.8e-38 Score=360.53 Aligned_cols=253 Identities=26% Similarity=0.368 Sum_probs=208.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----hhHHHHHHHHHHHHhcc--CCCceeEEEEEe
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQ--HQHVVRYYQAWF 424 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~l~--HpnIV~l~~~~~ 424 (1170)
....++|++.+.||+|+||.||+|++..+|+.||||+++...... .....+.+|+.+++.++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 345678999999999999999999999999999999997653321 12245678999999996 599999999873
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC--CcHHHHHHhcCCCCHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP--RTLRQVFESYDHFDKELAWHLFRQI 502 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~--gsL~~~l~~~~~l~e~~~~~i~~qI 502 (1170)
. ...++++|||+. ++|.+++.....+++..++.++.||
T Consensus 119 ~----------------------------------------~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi 158 (320)
T 3a99_A 119 R----------------------------------------PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 158 (320)
T ss_dssp C----------------------------------------SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred c----------------------------------------CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHH
Confidence 2 356899999996 6999999988899999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeec-CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
+.||+|||++||+||||||+|||++ .++.+||+|||+++..... ......||+.|+|||++.
T Consensus 159 ~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~-----------------~~~~~~gt~~y~aPE~~~ 221 (320)
T 3a99_A 159 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----------------VYTDFDGTRVYSPPEWIR 221 (320)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSS-----------------CBCCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccc-----------------cccCCCCCccCCChHHhc
Confidence 9999999999999999999999999 7799999999999865321 113357999999999988
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
+...++.++|||||||++|||++ ||..... ........+ ...++++.+||.+||+.||.+|||+.+++
T Consensus 222 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~ll 292 (320)
T 3a99_A 222 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR---QRVSSECQHLIRWCLALRPSDRPTFEEIQ 292 (320)
T ss_dssp HSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHCCCCCS---SCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hhccccccc---ccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 74445789999999999999997 7754322 111122222 34567999999999999999999999999
Q ss_pred hccCCCCchHH
Q 001059 659 QDALPPQMEYE 669 (1170)
Q Consensus 659 ~~~~~~~~~~~ 669 (1170)
+|+||......
T Consensus 293 ~hp~~~~~~~~ 303 (320)
T 3a99_A 293 NHPWMQDVLLP 303 (320)
T ss_dssp TSGGGSSCCCH
T ss_pred cCHhhcCccCc
Confidence 99999887543
No 197
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=6.2e-38 Score=359.85 Aligned_cols=250 Identities=24% Similarity=0.349 Sum_probs=193.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEE----EEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~v----AVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..++|++.+.||+|+||+||+|++..+|+.+ |+|.++.. ........+.+|+.++++++||||++++++|.+
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 88 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT--- 88 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEES---
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec---
Confidence 3578999999999999999999998887764 77766532 223345689999999999999999999998843
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+++|+|+. |+|.+++.. ...+++..++.++.||+.||
T Consensus 89 --------------------------------------~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l 130 (327)
T 3poz_A 89 --------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130 (327)
T ss_dssp --------------------------------------SSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 12578899986 699998876 45699999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+|+....... ........||+.|+|||++.+ ..+
T Consensus 131 ~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~~~~~t~~y~aPE~~~~-~~~ 196 (327)
T 3poz_A 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-------------EYHAEGGKVPIKWMALESILH-RIY 196 (327)
T ss_dssp HHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC--------------------CCCGGGSCHHHHHH-CCC
T ss_pred HHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcc-------------cccccCCCccccccChHHhcc-CCC
Confidence 999999999999999999999999999999999987643211 111234467889999999987 578
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|||++ ||......+... .+. ....++.....++++.+++.+||+.||.+|||+.+++++
T Consensus 197 ~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILE-KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-HHH-TTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred CchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHH-HHH-cCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 999999999999999986 665544333222 222 233333444567899999999999999999999999976
No 198
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.8e-37 Score=344.87 Aligned_cols=245 Identities=24% Similarity=0.377 Sum_probs=191.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~--~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.++|++.+.||+|+||.||+|.+. |+.||||+++..... ....+.+.+|+.+++.++||||++++++|..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 77 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK------ 77 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC------
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec------
Confidence 478999999999999999999985 899999998754322 2234678899999999999999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++. ...+++..++.++.||+.||+|||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH 122 (271)
T 3dtc_A 78 ----------------------------------EPNLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLH 122 (271)
T ss_dssp ----------------------------------C--CEEEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCceEEEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 58887775 457999999999999999999999
Q ss_pred hCC---ccccCCCCCceeecC--------CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 001059 511 GQG---IIHRDLTPNNIFFDA--------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 511 s~g---IiHrDLKp~NILi~~--------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
++| |+||||||+|||++. ++.+||+|||+++...... .....||+.|+|||+
T Consensus 123 ~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----------------~~~~~~~~~y~aPE~ 185 (271)
T 3dtc_A 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-----------------KMSAAGAYAWMAPEV 185 (271)
T ss_dssp HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC------------------------------CCGGGSCHHH
T ss_pred hCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccccc-----------------ccCCCCccceeCHHH
Confidence 999 899999999999986 6789999999998653211 123479999999999
Q ss_pred ccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 580 EQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 580 l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
+.+ ..++.++||||||+++|+|++ ||.............. ....++.....++++.++|.+||+.||.+|||+.+
T Consensus 186 ~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e 263 (271)
T 3dtc_A 186 IRA-SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM-NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTN 263 (271)
T ss_dssp HHH-CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred hcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc-CCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHH
Confidence 987 568999999999999999997 7876655554444333 22223334556789999999999999999999999
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
++++
T Consensus 264 ~l~~ 267 (271)
T 3dtc_A 264 ILDQ 267 (271)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9986
No 199
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.1e-37 Score=348.32 Aligned_cols=260 Identities=35% Similarity=0.657 Sum_probs=204.3
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++.++|++.+.||+|+||.||+|.+..+|+.||+|+++... ..+.+|+.+++.++||||++++++|......
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~- 79 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYD- 79 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccC-
Confidence 455678999999999999999999999999999999997532 2467899999999999999999987442100
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc--CCCCHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qI~~gL~ 507 (1170)
.. .............+|+|||||++ +|.+++... ..+++..++.++.||+.||.
T Consensus 80 --~~---------------------~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~ 136 (284)
T 2a19_B 80 --PE---------------------TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVD 136 (284)
T ss_dssp --------------------------------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHH
T ss_pred --cc---------------------cccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHH
Confidence 00 00000111235678999999985 999999754 57999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||++....... ......||+.|+|||++.+ ..++
T Consensus 137 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~ 199 (284)
T 2a19_B 137 YIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG----------------KRTRSKGTLRYMSPEQISS-QDYG 199 (284)
T ss_dssp HHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS----------------CCCCCCSCCTTSCHHHHHC-SCCC
T ss_pred HHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccc----------------cccccCCcccccChhhhcc-CCCc
Confidence 9999999999999999999999999999999998653211 1234579999999999987 5689
Q ss_pred ccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 588 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
.++|||||||++|+|++...+..........+. ...++. ..++++.++|.+||+.||.+|||+.+++++.
T Consensus 200 ~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l 269 (284)
T 2a19_B 200 KEVDLYALGLILAELLHVCDTAFETSKFFTDLR-DGIISD---IFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269 (284)
T ss_dssp THHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHH-TTCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHhcCCcchhHHHHHHHhh-cccccc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 999999999999999984443333322222222 223332 3457899999999999999999999999985
No 200
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-37 Score=359.73 Aligned_cols=251 Identities=22% Similarity=0.268 Sum_probs=200.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||+||+|++. .++..||||+++... .......+.+|+.+|+++ +||||++++++|..
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-- 120 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTL-- 120 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee--
Confidence 478999999999999999999983 356789999997432 233456799999999999 99999999998732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC------------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------ 488 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------ 488 (1170)
...+|+|||||+ ++|.+++....
T Consensus 121 --------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (344)
T 1rjb_A 121 --------------------------------------SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 162 (344)
T ss_dssp --------------------------------------SSSCEEEEECCTTCBHHHHHHTTTTCC---------------
T ss_pred --------------------------------------CCccEEEEecCCCCcHHHHHhhccccccccccchhhhccccc
Confidence 234699999996 59999997643
Q ss_pred -----CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccc
Q 001059 489 -----HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 563 (1170)
Q Consensus 489 -----~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 563 (1170)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ..
T Consensus 163 ~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------------~~ 229 (344)
T 1rjb_A 163 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN-------------YV 229 (344)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-------------SE
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc-------------ce
Confidence 278999999999999999999999999999999999999999999999999986532210 01
Q ss_pred cCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHH
Q 001059 564 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 639 (1170)
Q Consensus 564 ~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~L 639 (1170)
......||+.|+|||++.+ ..++.++|||||||++|+|++ ||............+. ....++.....++++.+|
T Consensus 230 ~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l 307 (344)
T 1rjb_A 230 VRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ-NGFKMDQPFYATEEIYII 307 (344)
T ss_dssp EETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH-TTCCCCCCTTCCHHHHHH
T ss_pred eccCccCccCccCHHHhcc-CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHh-cCCCCCCCCCCCHHHHHH
Confidence 1233568899999999987 568999999999999999996 7765543333333333 233333344567899999
Q ss_pred HHHccCCCCCCCCCHHHHHhc
Q 001059 640 LRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~ 660 (1170)
|.+||+.||.+|||+.+++++
T Consensus 308 i~~~l~~dp~~Rps~~~l~~~ 328 (344)
T 1rjb_A 308 MQSCWAFDSRKRPSFPNLTSF 328 (344)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCchhCcCHHHHHHH
Confidence 999999999999999999986
No 201
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=361.60 Aligned_cols=250 Identities=23% Similarity=0.351 Sum_probs=203.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-------CcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEee
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-------GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 425 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e 425 (1170)
.++|.+.+.||+|+||+||+|++..+ +..||||+++.. ........+.+|+.+++.+ +||||++++++|.+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 47899999999999999999998643 357999999744 3444567899999999999 99999999998832
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------- 488 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------- 488 (1170)
...+|+|||||+ ++|.+++....
T Consensus 147 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~ 186 (382)
T 3tt0_A 147 ----------------------------------------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 186 (382)
T ss_dssp ----------------------------------------SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCC
T ss_pred ----------------------------------------CCceEEEEEecCCCcHHHHHHHhccccccccccccccccc
Confidence 344699999996 59999997653
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 489 ~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....... .......
T Consensus 187 ~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~-------------~~~~~~~ 253 (382)
T 3tt0_A 187 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-------------YKKTTNG 253 (382)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCT-------------TCCCTTC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccc-------------cccccCC
Confidence 499999999999999999999999999999999999999999999999999986532210 0112345
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.||+.|+|||++.+ ..++.++|||||||++|||++ ||......+.... +. ....+......++++.+||.+||
T Consensus 254 ~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l 330 (382)
T 3tt0_A 254 RLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL-LK-EGHRMDKPSNCTNELYMMMRDCW 330 (382)
T ss_dssp CCGGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HH-TTCCCCCCSSCCHHHHHHHHHHT
T ss_pred CCCcceeCHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HH-cCCCCCCCccCCHHHHHHHHHHc
Confidence 68899999999987 578999999999999999986 6665544443332 22 23333334567789999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
+.||.+|||+.+++++
T Consensus 331 ~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 331 HAVPSQRPTFKQLVED 346 (382)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCChhhCcCHHHHHHH
Confidence 9999999999999986
No 202
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.6e-37 Score=349.65 Aligned_cols=250 Identities=22% Similarity=0.284 Sum_probs=201.3
Q ss_pred CCceEEe-eeccCCcEEEEEEEE--ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQ-PLGHGGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~-~LG~G~fG~Vyka~~--~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++.+ .||+|+||+||+|.+ ..+++.||||+++.........+.+.+|+.+++.++||||+++++++ +
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~------ 88 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E------ 88 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E------
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C------
Confidence 5789988 999999999999965 55688999999976555555567899999999999999999999887 2
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+||||++ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 89 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH 134 (291)
T 1xbb_A 89 ----------------------------------AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 134 (291)
T ss_dssp ----------------------------------SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 234689999997 599999998888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..++.++
T Consensus 135 ~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 201 (291)
T 1xbb_A 135 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN------------YYKAQTHGKWPVKWYAPECINY-YKFSSKS 201 (291)
T ss_dssp HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS------------EEEC----CCCGGGCCHHHHHH-CEEEHHH
T ss_pred hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC------------cccccccCCCCceeeChHHhcc-CCCChhh
Confidence 99999999999999999999999999999986532210 0111233457899999999987 4688999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||+++|+|++ ||......+...... ....+......++++.++|.+||+.||.+|||+.++++.
T Consensus 202 Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 273 (291)
T 1xbb_A 202 DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE--KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 273 (291)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999996 776655544433322 233334445677899999999999999999999999864
No 203
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.1e-37 Score=348.60 Aligned_cols=252 Identities=27% Similarity=0.501 Sum_probs=193.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
..+++|++.+.||+|+||.||+|.+..+|+.||||+++... ........+.+|+.+++.++||||++++++|.+
T Consensus 29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 103 (310)
T 2wqm_A 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE----- 103 (310)
T ss_dssp SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----
T ss_pred ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----
Confidence 34678999999999999999999999999999999997643 334456778999999999999999999998843
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh----cCCCCHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|++|||+++ +|.+++.. ...+++..++.++.||+.|
T Consensus 104 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~ 148 (310)
T 2wqm_A 104 -----------------------------------DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148 (310)
T ss_dssp -----------------------------------TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHH
Confidence 3568999999975 99988864 4569999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|.|||++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..
T Consensus 149 l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~ 212 (310)
T 2wqm_A 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NG 212 (310)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------------------------------CCSSCCHHHHTT-CC
T ss_pred HHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC---------------ccccccCCCeeEeChHHhCC-CC
Confidence 999999999999999999999999999999999998653211 01133579999999999987 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhH-HHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~-~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++.++|||||||++|+|++ ||..... .......+. ....++ .....++++.+||.+||+.||.+|||+.+++++
T Consensus 213 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~ 291 (310)
T 2wqm_A 213 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV 291 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHH-TTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhh-cccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 8999999999999999997 7754321 112222222 223332 234567899999999999999999999999974
No 204
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.8e-37 Score=351.96 Aligned_cols=251 Identities=25% Similarity=0.297 Sum_probs=202.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~-----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||+||+|.+ ..+++.||||+++.. ......+.+.+|+.+++++ +||||++++++|..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 98 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-- 98 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc-hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec--
Confidence 36899999999999999999996 356789999999744 3334557899999999999 99999999998732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcC------------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD------------------ 488 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~------------------ 488 (1170)
....|+|||||++ +|.+++....
T Consensus 99 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 140 (313)
T 1t46_A 99 --------------------------------------GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140 (313)
T ss_dssp --------------------------------------SSSCEEEEECCTTEEHHHHHHHTTTTC--------------C
T ss_pred --------------------------------------CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccc
Confidence 2346899999975 9999987653
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 489 ~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .......
T Consensus 141 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~ 207 (313)
T 1t46_A 141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN-------------YVVKGNA 207 (313)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT-------------SEECSSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccccccccccc-------------ceeccCC
Confidence 489999999999999999999999999999999999999999999999999986532210 0112335
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.||+.|+|||++.+ ..++.++|||||||++|+|++ ||............+.. ...+......++++.++|.+||
T Consensus 208 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l 285 (313)
T 1t46_A 208 RLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE-GFRMLSPEHAPAEMYDIMKTCW 285 (313)
T ss_dssp EECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHH-TCCCCCCTTSCHHHHHHHHHHT
T ss_pred CCcceeeChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhcc-CCCCCCcccCCHHHHHHHHHHc
Confidence 68899999999887 568999999999999999986 66554333333333332 2223333456789999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
+.||.+|||+.+++++
T Consensus 286 ~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 286 DADPLKRPTFKQIVQL 301 (313)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCCchhCcCHHHHHHH
Confidence 9999999999999975
No 205
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.1e-37 Score=354.25 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=203.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||+||+|++. .+++.||||+++.. ........+.+|+.+++++ +||||++++++|...
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~- 103 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 103 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT-
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC-CCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC-
Confidence 468999999999999999999963 46789999999744 3334556789999999999 799999999987432
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCC----------------C
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH----------------F 490 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~----------------l 490 (1170)
...+|++||||++ +|.+++..... +
T Consensus 104 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 145 (316)
T 2xir_A 104 --------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145 (316)
T ss_dssp --------------------------------------TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCE
T ss_pred --------------------------------------CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhcccc
Confidence 2347999999974 99999986543 8
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 001059 491 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570 (1170)
Q Consensus 491 ~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 570 (1170)
++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... .........|
T Consensus 146 ~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------------~~~~~~~~~~ 212 (316)
T 2xir_A 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-------------DYVRKGDARL 212 (316)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-------------TSEEETTEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCc-------------cceeccCCCc
Confidence 999999999999999999999999999999999999999999999999998653211 0111234568
Q ss_pred CccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCC
Q 001059 571 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 646 (1170)
Q Consensus 571 T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~ 646 (1170)
|+.|+|||++.+ ..++.++|||||||++|+|++ ||............+.. +..+......++++.++|.+||+.
T Consensus 213 t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~ 290 (316)
T 2xir_A 213 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHG 290 (316)
T ss_dssp CGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH-TCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred ceeecCchhhcc-ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhcc-CccCCCCCCCCHHHHHHHHHHcCC
Confidence 999999999987 568999999999999999996 77554433333333332 222333345678999999999999
Q ss_pred CCCCCCCHHHHHhc
Q 001059 647 SPSDRPSATELLQD 660 (1170)
Q Consensus 647 dP~~RPta~eiL~~ 660 (1170)
||.+|||+.++++|
T Consensus 291 dp~~Rps~~ell~~ 304 (316)
T 2xir_A 291 EPSQRPTFSELVEH 304 (316)
T ss_dssp SGGGSCCHHHHHHH
T ss_pred ChhhCcCHHHHHHH
Confidence 99999999999987
No 206
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.4e-38 Score=358.76 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=197.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE----EEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++++.||+|+||+||+|++..+|+. ||+|.+.... .......+.+|+.+++.++||||++++++|.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----- 85 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP----- 85 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-----
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-----
Confidence 47899999999999999999999888876 7777765332 2223346788999999999999999998862
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+++|||||+ ++|.+++... ..+++..++.++.||+.||+
T Consensus 86 ------------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~ 129 (325)
T 3kex_A 86 ------------------------------------GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMY 129 (325)
T ss_dssp ------------------------------------BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHH
Confidence 234789999997 6999988764 57999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ ..++
T Consensus 130 ~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~ 195 (325)
T 3kex_A 130 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK-------------QLLYSEAKTPIKWMALESIHF-GKYT 195 (325)
T ss_dssp HHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT-------------CCC-----CCTTTSCHHHHHH-CCCC
T ss_pred HHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccc-------------cccccCCCCcccccChHHhcc-CCCC
Confidence 99999999999999999999999999999999987532210 111234578889999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|+|++ ||......+...... ....+......++++.++|.+||+.||.+|||+.+++++
T Consensus 196 ~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 196 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE--KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH--TTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred hhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH--cCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999986 776544333332222 222222233455688999999999999999999999986
No 207
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.1e-37 Score=347.24 Aligned_cols=251 Identities=25% Similarity=0.356 Sum_probs=193.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|++. ..||||+++.........+.+.+|+.+|+.++||||+++++++.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------- 90 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-------- 90 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--------
T ss_pred CccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc--------
Confidence 3468999999999999999999865 35999999877666666788999999999999999999998541
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+++|||||+ ++|.+++.. ...+++..++.++.||+.||+|||
T Consensus 91 ---------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH 137 (289)
T 3og7_A 91 ---------------------------------APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 137 (289)
T ss_dssp ---------------------------------SSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 234689999997 599998864 456999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDE 588 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ 588 (1170)
++||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.. ...++.
T Consensus 138 ~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 204 (289)
T 3og7_A 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-------------SHQFEQLSGSILWMAPEVIRMQDSNPYSF 204 (289)
T ss_dssp HTTCCCSCCCGGGEEEETTTEEEECCCC-------------------------------CCCTTCCHHHHC----CCSCH
T ss_pred hCCcccccCccceEEECCCCCEEEccceeccccccccc-------------cccccccCCCccccCchhhcccCCCCCCc
Confidence 99999999999999999999999999999986532110 011234579999999999862 245788
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC---CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~---p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|+|++ ||............+...... +.....+++++.+||.+||+.||.+|||+.++++.
T Consensus 205 ~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 282 (289)
T 3og7_A 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAE 282 (289)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 9999999999999997 887655544444444322221 22234567899999999999999999999999874
No 208
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.8e-37 Score=370.41 Aligned_cols=241 Identities=24% Similarity=0.384 Sum_probs=198.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.+. |+.||||+++... ..+.+.+|+.+|++++||||+++++++.+.
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------- 258 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 258 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECT-------
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcC-------
Confidence 478999999999999999999986 8899999997432 346799999999999999999999987432
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ |+|.+++...+. +++..++.++.||+.||+|||
T Consensus 259 --------------------------------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH 306 (450)
T 1k9a_A 259 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306 (450)
T ss_dssp --------------------------------TSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 235799999996 599999987654 799999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++
T Consensus 307 ~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~s 367 (450)
T 1k9a_A 307 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 367 (450)
T ss_dssp HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------------------------CCCTTTSCHHHHHS-SCCCHHH
T ss_pred hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc------------------ccCCCCCcceeCHHHhcC-CCCCcHH
Confidence 999999999999999999999999999999743211 122367889999999987 5799999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++|||++ ||......+...... .+..++....+++++.+||.+||+.||.+|||+.++++.
T Consensus 368 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~--~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~ 439 (450)
T 1k9a_A 368 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE--KGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQ 439 (450)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999996 776544433333222 233333445677899999999999999999999999863
No 209
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.1e-37 Score=368.63 Aligned_cols=244 Identities=25% Similarity=0.332 Sum_probs=201.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.+. ++..||||+++.... ..+.+.+|+.+|+.++||||+++++++.
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~l~~~~~--------- 253 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVT--------- 253 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSB---CHHHHHHHHHHHTTCCCTTBCCEEEEEC---------
T ss_pred hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCc---cHHHHHHHHHHHhhCCCCCEeeEEEEEe---------
Confidence 468999999999999999999997 578899999975432 3568999999999999999999998862
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ |+|.+++... ..+++..++.++.||+.||+|||
T Consensus 254 --------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH 301 (454)
T 1qcf_A 254 --------------------------------KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 301 (454)
T ss_dssp --------------------------------SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 124689999996 6999999754 36899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++.+ ..++.++
T Consensus 302 ~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 366 (454)
T 1qcf_A 302 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT--------------AREGAKFPIKWTAPEAINF-GSFTIKS 366 (454)
T ss_dssp HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH--------------TTCSSSSCGGGSCHHHHHH-CCCCHHH
T ss_pred hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee--------------ccCCCcccccccCHHHhcc-CCCCcHH
Confidence 999999999999999999999999999999875422111 1123457889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||||||++|||++ ||......+....... +..++....+++++.+||.+||+.||.+|||+.+|++
T Consensus 367 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER--GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 99999999999997 7766555544433322 2233334567789999999999999999999999986
No 210
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.6e-37 Score=357.95 Aligned_cols=256 Identities=24% Similarity=0.359 Sum_probs=180.9
Q ss_pred CccccCCceEEe-eeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHH-HHHHhccCCCceeEEEEEeecC
Q 001059 350 SSRYLNDFEELQ-PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV-ATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 350 ~~~~~~~y~~~~-~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev-~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
.....++|.+.+ .||+|+||+||+|+++.+|+.||||++... . ...+|+ ..++.+.||||++++++|....
T Consensus 23 ~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~ 95 (336)
T 3fhr_A 23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---P----KARQEVDHHWQASGGPHIVCILDVYENMH 95 (336)
T ss_dssp CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---H----HHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred CccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---H----HHHHHHHHHHHhcCCCChHHHHHHHhhcc
Confidence 345668999966 599999999999999999999999998632 1 222333 3456679999999999874320
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcC--CCCHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD--HFDKELAWHLFRQIVE 504 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~--~l~e~~~~~i~~qI~~ 504 (1170)
.....+|+|||||++ +|.+++.... .+++.+++.++.||+.
T Consensus 96 ------------------------------------~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~ 139 (336)
T 3fhr_A 96 ------------------------------------HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGT 139 (336)
T ss_dssp ------------------------------------TTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHH
T ss_pred ------------------------------------CCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 124568999999975 9999998654 6999999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
||+|||++||+||||||+|||++. ++.+||+|||+++..... .....+||+.|+|||++.
T Consensus 140 ~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~t~~y~aPE~~~ 202 (336)
T 3fhr_A 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-----------------ALQTPCYTPYYVAPEVLG 202 (336)
T ss_dssp HHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--------------------------------------
T ss_pred HHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc-----------------ccccCCCCcCccChhhhC
Confidence 999999999999999999999986 455999999999754311 113457899999999997
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHH----HHHhhhcCC-CCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIV----LSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~----~~~l~~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
+ ..++.++|||||||++|+|++ ||......... ......... ..+.+...++++.+||.+||+.||.+|||
T Consensus 203 ~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 281 (336)
T 3fhr_A 203 P-EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLT 281 (336)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC
T ss_pred C-CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcC
Confidence 6 568999999999999999997 77554433221 111111112 22344567889999999999999999999
Q ss_pred HHHHHhccCCCCc
Q 001059 654 ATELLQDALPPQM 666 (1170)
Q Consensus 654 a~eiL~~~~~~~~ 666 (1170)
+.++++|||+.+.
T Consensus 282 ~~ell~hp~~~~~ 294 (336)
T 3fhr_A 282 ITQFMNHPWINQS 294 (336)
T ss_dssp HHHHHHSHHHHTG
T ss_pred HHHHhcCcccccc
Confidence 9999999998764
No 211
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.5e-37 Score=363.74 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=193.8
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
...++|++.+.||+|+||+||+|+++ .++..||||+++... .....+.+.+|+.+|++++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--- 117 (373)
T 2qol_A 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--- 117 (373)
T ss_dssp CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee---
Confidence 34568999999999999999999987 467789999987542 34456689999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++.... .+++.+++.++.||+.||
T Consensus 118 -------------------------------------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL 160 (373)
T 2qol_A 118 -------------------------------------SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160 (373)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 345699999996 69999997654 699999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..+
T Consensus 161 ~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~ 227 (373)
T 2qol_A 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE------------AAYTTRGGKIPIRWTSPEAIAY-RKF 227 (373)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------------------CTTSCHHHHHH-CCC
T ss_pred HHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCc------------cceeccCCCcCCCccChhhhcc-CCc
Confidence 999999999999999999999999999999999987542210 0011123356889999999987 568
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|||++ ||......+....... ...++.....++++.++|.+||+.||.+||++.++++.
T Consensus 228 ~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~ 303 (373)
T 2qol_A 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303 (373)
T ss_dssp CHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT--TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHH
Confidence 999999999999999885 7766555444333322 22222334567899999999999999999999999864
No 212
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.2e-37 Score=351.97 Aligned_cols=250 Identities=21% Similarity=0.285 Sum_probs=204.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++.+.||+|+||.||+|.++ .+++.||||++... ........+.+|+.+++.++||||+++++++.+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 99 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ--- 99 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS---
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc---
Confidence 468999999999999999999987 45789999998743 334455678999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------CCCCHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWH 497 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~e~~~~~ 497 (1170)
....|+|||||+ ++|.+++... ..+++..++.
T Consensus 100 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 142 (322)
T 1p4o_A 100 -------------------------------------GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142 (322)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHH
T ss_pred -------------------------------------CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHH
Confidence 345689999997 5999988653 3579999999
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 498 i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ .......||+.|+||
T Consensus 143 i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 209 (322)
T 1p4o_A 143 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMSP 209 (322)
T ss_dssp HHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCE-------------EGGGSSEECGGGCCH
T ss_pred HHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCcccccccccccc-------------ccccCCCCCCCccCh
Confidence 9999999999999999999999999999999999999999999865432211 112334689999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
|++.+ ..++.++|||||||++|+|++ ||......+...... ....++.....++.+.+||.+||+.||.+|||
T Consensus 210 E~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 286 (322)
T 1p4o_A 210 ESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM--EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPS 286 (322)
T ss_dssp HHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hhhcc-CCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence 99987 568999999999999999986 666554444433332 23333444567789999999999999999999
Q ss_pred HHHHHhc
Q 001059 654 ATELLQD 660 (1170)
Q Consensus 654 a~eiL~~ 660 (1170)
+.+++++
T Consensus 287 ~~e~l~~ 293 (322)
T 1p4o_A 287 FLEIISS 293 (322)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999986
No 213
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=370.43 Aligned_cols=256 Identities=29% Similarity=0.402 Sum_probs=192.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.+|++.+.||+|+||+||. ....+|+.||||++..... ..+.+|+.+|+.+ +|||||++++++.+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~-------- 89 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKD-------- 89 (432)
T ss_dssp EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEE--------
T ss_pred EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEec--------
Confidence 3689999999999999764 4455899999999864322 2356899999999 89999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+++|.+++.... .+.+..++.++.||+.||+|||++
T Consensus 90 --------------------------------~~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 137 (432)
T 3p23_A 90 --------------------------------RQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL 137 (432)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCEEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC
Confidence 45789999999999999997654 456667789999999999999999
Q ss_pred CccccCCCCCceeecC-----CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCC
Q 001059 513 GIIHRDLTPNNIFFDA-----RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPK 585 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~-----~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~ 585 (1170)
||+||||||+|||++. ...+||+|||+|+........ ....+..+||+.|+|||++.+ ...
T Consensus 138 ~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~------------~~~~~~~~gt~~y~APE~l~~~~~~~ 205 (432)
T 3p23_A 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS------------FSRRSGVPGTEGWIAPEMLSEDCKEN 205 (432)
T ss_dssp TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------------------CCSCTTSCCGGGTSCC---C
T ss_pred cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc------------eeeccccCCCcCccChhhhhcccccC
Confidence 9999999999999953 235889999999865422100 012245689999999999974 245
Q ss_pred CCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
++.++|||||||++|||++ ||..........................++.+.+||.+||+.||.+|||+.++++||
T Consensus 206 ~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp 285 (432)
T 3p23_A 206 PTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP 285 (432)
T ss_dssp CCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence 7889999999999999997 665444333322211111111111122334678999999999999999999999999
Q ss_pred CCCCchH
Q 001059 662 LPPQMEY 668 (1170)
Q Consensus 662 ~~~~~~~ 668 (1170)
||....+
T Consensus 286 ~f~~~~~ 292 (432)
T 3p23_A 286 FFWSLEK 292 (432)
T ss_dssp TTCCHHH
T ss_pred cccChHH
Confidence 9998765
No 214
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=350.78 Aligned_cols=240 Identities=30% Similarity=0.465 Sum_probs=191.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|++. ++.||||++... ...+.+.+|+.+|++++||||+++++++.
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------- 71 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACL--------- 71 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCT---------
T ss_pred HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEc---------
Confidence 468999999999999999999985 889999998532 34567899999999999999999998762
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...|+|||||+ ++|.+++.... .++...++.++.||+.||+||
T Consensus 72 ---------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~L 118 (307)
T 2eva_A 72 ---------------------------------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118 (307)
T ss_dssp ---------------------------------TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHH
Confidence 12489999996 59999998655 378999999999999999999
Q ss_pred Hh---CCccccCCCCCceeecCCCC-EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 510 HG---QGIIHRDLTPNNIFFDARND-IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 510 Hs---~gIiHrDLKp~NILi~~~~~-vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|+ +||+||||||+|||++.++. +||+|||+++..... .....||+.|+|||++.+ ..
T Consensus 119 H~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~ 179 (307)
T 2eva_A 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH------------------MTNNKGSAAWMAPEVFEG-SN 179 (307)
T ss_dssp HTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------------------------CCTTSSCHHHHTC-CC
T ss_pred HhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc------------------cccCCCCCceEChhhhCC-CC
Confidence 99 89999999999999998886 799999999754211 123469999999999987 57
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++.++|||||||++|||++ ||...................++.....++.+.++|.+||+.||.+|||+.+++++
T Consensus 180 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 257 (307)
T 2eva_A 180 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI 257 (307)
T ss_dssp CCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 8999999999999999997 77643222111111122344455556778899999999999999999999999975
No 215
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=357.72 Aligned_cols=262 Identities=18% Similarity=0.246 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCChh---------hHHHHHHHHHHHHhccCCCceeEEE
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLP---------VNDRILREVATLSRLQHQHVVRYYQ 421 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~---tg~~vAVK~i~~~~~~~~---------~~~~~~~Ev~iL~~l~HpnIV~l~~ 421 (1170)
.++|++.+.||+|+||+||+|++.. ++..||||++........ ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3679999999999999999999987 788999999875432111 1124668889999999999999999
Q ss_pred EEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHH
Q 001059 422 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ 501 (1170)
Q Consensus 422 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~q 501 (1170)
++.... .....+|+|||||+++|.+++...+.+++..++.++.|
T Consensus 116 ~~~~~~------------------------------------~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~q 159 (345)
T 2v62_A 116 SGLTEF------------------------------------KGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIR 159 (345)
T ss_dssp EEEEES------------------------------------SSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHH
T ss_pred cccccc------------------------------------CCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHH
Confidence 985420 12467899999997799999988778999999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCC--CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
|+.||+|||++||+||||||+|||++.++ .+||+|||+|+.+......... .........||+.|+|||+
T Consensus 160 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~ 231 (345)
T 2v62_A 160 MLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQY--------QENPRKGHNGTIEFTSLDA 231 (345)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCC--------CCCGGGCSCSCTTTCCHHH
T ss_pred HHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccc--------hhccccccCCCccccCHHH
Confidence 99999999999999999999999999877 9999999999876433211000 0111245689999999999
Q ss_pred ccCCCCCCccchhHHHHHHHHHhhc---CCCchhH--HHHHHHHhhhcCCCCCcc------ccCCHHHHHHHHHccCCCC
Q 001059 580 EQGWPKIDEKADMYSLGIVFFELWH---PFSTAME--RQIVLSDLKQKGELPPSW------VAKFSEQESLLRRLMSPSP 648 (1170)
Q Consensus 580 l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~--~~~~~~~l~~~~~~p~~~------~~~~~e~~~LI~~~L~~dP 648 (1170)
+.+ ..++.++|||||||++|||++ ||..... .............+|... ...++++.++|.+||+.||
T Consensus 232 ~~~-~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 310 (345)
T 2v62_A 232 HKG-VALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAY 310 (345)
T ss_dssp HHT-CCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCT
T ss_pred hcC-CCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCc
Confidence 998 568999999999999999997 8854221 111111111112222211 1567799999999999999
Q ss_pred CCCCCHHHHHhc
Q 001059 649 SDRPSATELLQD 660 (1170)
Q Consensus 649 ~~RPta~eiL~~ 660 (1170)
.+|||+.++++.
T Consensus 311 ~~Rps~~~l~~~ 322 (345)
T 2v62_A 311 DEKPNYQALKKI 322 (345)
T ss_dssp TCCCCHHHHHHH
T ss_pred ccCCCHHHHHHH
Confidence 999999999874
No 216
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=6.8e-37 Score=344.39 Aligned_cols=256 Identities=23% Similarity=0.244 Sum_probs=200.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|++..+|+.||||++...... ..+.+|+.+++.++|++++..+..+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~------- 75 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGA------- 75 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC----CHHHHHHHHHHHHTTSTTCCCEEEEEE-------
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch----hHHHHHHHHHHHhhcCCCCCccccccC-------
Confidence 457899999999999999999999999999999998754332 358899999999999988877665532
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.....|++|||++++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 76 --------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 123 (296)
T 3uzp_A 76 --------------------------------EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 123 (296)
T ss_dssp --------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2457899999998899999974 4579999999999999999999999
Q ss_pred CCccccCCCCCceeec---CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 512 QGIIHRDLTPNNIFFD---ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~---~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
+||+||||||+|||++ .++.+||+|||+++........... .........||+.|+|||++.+ ..++.
T Consensus 124 ~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ 194 (296)
T 3uzp_A 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI--------PYRENKNLTGTARYASINTHLG-IEQSR 194 (296)
T ss_dssp TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBC--------CCCCSCCCCSCTTTCCHHHHTT-CCCCH
T ss_pred CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccccc--------ccccccccccccccCChhhhcC-CCCCc
Confidence 9999999999999994 7889999999999876432211000 0011245689999999999988 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||++ ||..... .+........ ....+......++++.++|.+||+.||.+|||+.++++.
T Consensus 195 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 274 (296)
T 3uzp_A 195 RDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred chhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHH
Confidence 9999999999999997 7764211 1111111111 111111224567799999999999999999999999864
No 217
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.5e-37 Score=346.78 Aligned_cols=247 Identities=23% Similarity=0.296 Sum_probs=202.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.++.++..||+|++... ....+.+.+|+.+++.++||||+++++++..
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 80 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------- 80 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc--------
Confidence 47899999999999999999999999999999999743 2345678999999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 81 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 128 (288)
T 3kfa_A 81 --------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128 (288)
T ss_dssp --------------------------------SSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH
Confidence 345799999997 5999999764 34999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++....... ........+|+.|+|||++.+ ..++.++
T Consensus 129 ~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 193 (288)
T 3kfa_A 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--------------YTAHAGAKFPIKWTAPESLAY-NKFSIKS 193 (288)
T ss_dssp HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS--------------SEEETTEEECGGGCCHHHHHH-CCCCHHH
T ss_pred HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc--------------cccccCCccccCcCChhhhcc-CCCCchh
Confidence 9999999999999999999999999999998653221 011233467889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||+++|+|++ ||.......... .+. ....++.....++++.+||++||+.||.+|||+.++++.
T Consensus 194 Di~slG~il~~ll~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~ 265 (288)
T 3kfa_A 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 265 (288)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-HHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHh-ccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHH
Confidence 99999999999996 565433332222 222 222233345667899999999999999999999999874
No 218
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.1e-37 Score=339.48 Aligned_cols=246 Identities=23% Similarity=0.382 Sum_probs=201.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+. +++.||+|++...... .+.+.+|+.+++.++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 74 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLE-------- 74 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS--------
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcc--------
Confidence 368999999999999999999997 6889999999754332 3678999999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||+
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 122 (267)
T 3t9t_A 75 --------------------------------QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 122 (267)
T ss_dssp --------------------------------SSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHh
Confidence 235699999996 5999998765 468999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++....... .......||+.|+|||++.+ ..++.++|
T Consensus 123 ~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 187 (267)
T 3t9t_A 123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--------------TSSTGTKFPVKWASPEVFSF-SRYSSKSD 187 (267)
T ss_dssp TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH--------------HSTTSTTCCGGGCCHHHHHH-CCCCHHHH
T ss_pred CCcccCCCchheEEECCCCCEEEcccccccccccccc--------------cccccccccccccChhhhcC-CCccchhc
Confidence 9999999999999999999999999999986532211 11233467889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||+++|+|++ ||......+....... ...+......++++.++|.+||+.||.+|||+.+++++
T Consensus 188 i~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (267)
T 3t9t_A 188 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST--GFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258 (267)
T ss_dssp HHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhc--CCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999986 6765554444433332 22222233457799999999999999999999999975
No 219
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.4e-37 Score=356.23 Aligned_cols=252 Identities=23% Similarity=0.293 Sum_probs=194.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|++. |+.||||+++... .......+|+.+|++++||||+++++++.+..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 91 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT------ 91 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC------
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCC------
Confidence 468999999999999999999886 8999999996432 23445667999999999999999999985531
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.....+|+|||||+ ++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 92 ------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~ 140 (322)
T 3soc_A 92 ------------------------------SVDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHED 140 (322)
T ss_dssp ------------------------------SSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred ------------------------------CCCceEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 11346899999997 599999876 4599999999999999999999999
Q ss_pred ----------CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 513 ----------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 513 ----------gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
||+||||||+|||++.++.+||+|||+|+....... .......+||+.|+|||++.+
T Consensus 141 ~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~ 207 (322)
T 3soc_A 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS-------------AGDTHGQVGTRRYMAPEVLEG 207 (322)
T ss_dssp EEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSC-------------CCCCTTCCCCGGGCCHHHHTT
T ss_pred ccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccC-------------ccccccCccCccccCHhhccc
Confidence 999999999999999999999999999986532210 111234689999999999986
Q ss_pred C----CCCCccchhHHHHHHHHHhhc---CCCchh---------------HHHHHHHHhhhcCCCC---Cccc--cCCHH
Q 001059 583 W----PKIDEKADMYSLGIVFFELWH---PFSTAM---------------ERQIVLSDLKQKGELP---PSWV--AKFSE 635 (1170)
Q Consensus 583 ~----~~~~~ksDIwSlGviL~ELlt---Pf~~~~---------------~~~~~~~~l~~~~~~p---~~~~--~~~~e 635 (1170)
. ..++.++|||||||++|||++ ||.... ...............| ..+. ..+++
T Consensus 208 ~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (322)
T 3soc_A 208 AINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAM 287 (322)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHH
T ss_pred ccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHH
Confidence 3 235568899999999999997 664321 1111222222222222 1111 12346
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 636 QESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 636 ~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.+||.+||+.||.+|||+.++++.
T Consensus 288 l~~li~~cl~~dP~~Rps~~ell~~ 312 (322)
T 3soc_A 288 LCETIEECWDHDAEARLSAGCVGER 312 (322)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHH
Confidence 8999999999999999999999974
No 220
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4e-37 Score=347.13 Aligned_cols=253 Identities=23% Similarity=0.379 Sum_probs=193.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHh--ccCCCceeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--l~HpnIV~l~~~~~e~~~~~ 430 (1170)
..++|++.+.||+|+||+||+|++ +|+.||||++... ....+.+|.+++.. ++||||+++++++....
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~--- 75 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSR--- 75 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE---
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeecccc---
Confidence 457999999999999999999988 5999999998642 33456677777776 79999999999875431
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
.....+|+|||||+ ++|.+++.. ..+++..++.++.||+.||+||
T Consensus 76 ---------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~l 121 (301)
T 3q4u_A 76 ---------------------------------HSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHL 121 (301)
T ss_dssp ---------------------------------TTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHH
Confidence 12457899999997 599999854 5699999999999999999999
Q ss_pred H--------hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 510 H--------GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 510 H--------s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
| ++||+||||||+|||++.++.+||+|||+|+........ ........+||+.|+|||++.
T Consensus 122 H~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~ 190 (301)
T 3q4u_A 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ-----------LDVGNNPRVGTKRYMAPEVLD 190 (301)
T ss_dssp HSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------EECCCCCCCCCGGGCCHHHHT
T ss_pred HHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccc-----------ccccccccccccceeChhhhc
Confidence 9 999999999999999999999999999999865432111 011123458999999999998
Q ss_pred CCC-----CCCccchhHHHHHHHHHhhc-------------CCCchh----HHHHHHHHhhhcCC---CCCcc--ccCCH
Q 001059 582 GWP-----KIDEKADMYSLGIVFFELWH-------------PFSTAM----ERQIVLSDLKQKGE---LPPSW--VAKFS 634 (1170)
Q Consensus 582 ~~~-----~~~~ksDIwSlGviL~ELlt-------------Pf~~~~----~~~~~~~~l~~~~~---~p~~~--~~~~~ 634 (1170)
+.. .++.++|||||||++|||++ ||.... .............. +|..+ ...++
T Consensus 191 ~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (301)
T 3q4u_A 191 ETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLT 270 (301)
T ss_dssp TCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHH
T ss_pred CcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHH
Confidence 742 24479999999999999985 343221 11222222222222 22211 12346
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 635 EQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 635 e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++.+||.+||+.||.+|||+.++++.
T Consensus 271 ~l~~li~~cl~~dP~~Rps~~~i~~~ 296 (301)
T 3q4u_A 271 SLAKLMKECWYQNPSARLTALRIKKT 296 (301)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 78999999999999999999999874
No 221
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.1e-37 Score=353.48 Aligned_cols=254 Identities=28% Similarity=0.446 Sum_probs=205.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..++|++.+.||+|+||.||+|++ ..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 96 (327)
T 3lxl_A 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGP-- 96 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS--
T ss_pred chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--
Confidence 357899999999999999999994 568999999998643 334556799999999999999999999987432
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL 506 (1170)
....+|+|||||+ ++|.+++.. ...+++..++.++.||+.||
T Consensus 97 ------------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al 140 (327)
T 3lxl_A 97 ------------------------------------GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 140 (327)
T ss_dssp ------------------------------------SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 2467899999995 699999976 45699999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++...... ..........||+.|+|||++.+ ..+
T Consensus 141 ~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~~~~~~y~aPE~~~~-~~~ 207 (327)
T 3lxl_A 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK------------DYYVVREPGQSPIFWYAPESLSD-NIF 207 (327)
T ss_dssp HHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTC------------SEEECSSCCCSCGGGSCHHHHHH-CEE
T ss_pred HHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCC------------ccceeeccCCccccccCHHHhcc-CCC
Confidence 99999999999999999999999999999999998653221 01112234578999999999987 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHH--------------HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMER--------------QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~--------------~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
+.++|||||||++|+|++ ||...... ......+ .....++.....++++.+||.+||+.||.
T Consensus 208 ~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~ 286 (327)
T 3lxl_A 208 SRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL-EEGQRLPAPPACPAEVHELMKLCWAPSPQ 286 (327)
T ss_dssp EHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred ChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh-hcccCCCCCCcccHHHHHHHHHHcCCChh
Confidence 999999999999999997 55433321 1111222 23333444556778999999999999999
Q ss_pred CCCCHHHHHhc
Q 001059 650 DRPSATELLQD 660 (1170)
Q Consensus 650 ~RPta~eiL~~ 660 (1170)
+|||+.+++++
T Consensus 287 ~Rps~~ell~~ 297 (327)
T 3lxl_A 287 DRPSFSALGPQ 297 (327)
T ss_dssp GSCCHHHHHHH
T ss_pred hCcCHHHHHHH
Confidence 99999999875
No 222
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A
Probab=100.00 E-value=3.5e-37 Score=368.64 Aligned_cols=328 Identities=11% Similarity=0.029 Sum_probs=258.8
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC---CCcccccceEEEeccC----CceeeecCC
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHG----GDLLELSHE 782 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~----G~~laLRPD 782 (1170)
.++|+.||+|.++.+++.|++.+++.|+++||++|.||+| ++.. +.+.+.++||+|.|++ |+.++|||+
T Consensus 32 ~~~G~~d~lP~g~~l~~~I~~~~r~~~~~~G~~ei~tP~l~~~el~~~~sgh~d~f~~emy~~~d~g~~~l~~~l~LRP~ 111 (477)
T 1hc7_A 32 PVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPT 111 (477)
T ss_dssp SSTTCEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEESTTC---------CCTTCEEEEEESSSEEEEEEEECSC
T ss_pred CCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEecCccccHHHHhhcCCcccccccceEEEECCCCccCCCeEEEcCC
Confidence 4799999999999999999999999999999999999999 3322 2456789999999987 899999999
Q ss_pred CCHHHHHHHHhC----CCCceeEEEecCeEEcC-CCCC--CCCceeEeEEEEeCCCCcccHHHHHHH---HHHHH-HHcC
Q 001059 783 LRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS--PPNRYLQGDFDIIGGASALTEAEVLKV---TMDIV-TRFF 851 (1170)
Q Consensus 783 ~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e-~~~~--~~~ef~Q~GvEiiG~~~~~aDaEvi~l---a~~~l-~~lg 851 (1170)
.|++++|+++.+ +..|+|+||+|+|||+| +|++ |.|||+|+|+|+||.....+|+|++.+ +.+++ +.||
T Consensus 112 ~~~~i~~~~~~~~~s~r~LP~rl~qig~vfR~E~~~rGl~R~REF~q~d~~~~~~~~~~ad~E~~~~l~~~~~i~~~~Lg 191 (477)
T 1hc7_A 112 SETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAA 191 (477)
T ss_dssp SHHHHHHHHHHHCCBGGGCCEEEEEEEEEECCCSSCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHhhhhccccCCeeeEeecCEEeCCCCCCCcceeEEEEEccEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999988763 35699999999999998 4555 667899999999999999999998776 89999 8999
Q ss_pred CCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Q 001059 852 HAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLR 931 (1170)
Q Consensus 852 i~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~ 931 (1170)
+. +.+.++++. ++.
T Consensus 192 l~--~~~~~~~~~--------------------------e~~-------------------------------------- 205 (477)
T 1hc7_A 192 IP--VIEGLKTEK--------------------------EKF-------------------------------------- 205 (477)
T ss_dssp CC--CEEEECCTT--------------------------TSC--------------------------------------
T ss_pred Ce--EEEEeCChH--------------------------Hhc--------------------------------------
Confidence 95 888887620 000
Q ss_pred hcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccc
Q 001059 932 FCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1011 (1170)
Q Consensus 932 ~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~G 1011 (1170)
.|.. ....+|.-+.-|..||+|++|++ +. +.+.+.|
T Consensus 206 -~g~~--------------------------------~~~~ie~~~~dgr~~~~gt~~~l---g~--------~~s~~~g 241 (477)
T 1hc7_A 206 -AGAV--------------------------------YTTTIEALMKDGKALQAGTSHYL---GE--------NFARAFD 241 (477)
T ss_dssp -TTSS--------------------------------EEEEEEEECTTSCEEEEEEEEEE---ET--------HHHHHTT
T ss_pred -CCcc--------------------------------cceEEEEEcCCCcEEEEeeeEEc---cc--------ccccccC
Confidence 0000 00011111111345799999986 21 2368899
Q ss_pred cccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC------CCCCCCCCCCceEEEEEcCCC----ccHHHH
Q 001059 1012 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRGGG----GLLVER 1081 (1170)
Q Consensus 1012 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~------~~~~~~~~~~~~vlv~~~~~~----~~~~~a 1081 (1170)
+||++. -| ....++++||++| +||+.+|.+ +...+...+|.+|+|++++.+ ....+|
T Consensus 242 ~~y~~~---~G---------~~~~~~~~~~Gig-eRli~~lie~~~d~~gl~~P~~laP~qV~Iipi~~~~~~~~~~~~a 308 (477)
T 1hc7_A 242 IKFQDR---DL---------QVKYVHTTSWGLS-WRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAA 308 (477)
T ss_dssp CEEECT---TS---------CEEECEEEEEEEE-THHHHHHHHHHCBTTBCCCCTTTCSCSEEEEECCCTTTHHHHHHHH
T ss_pred eEEECC---CC---------CEEeeeEeeccHH-HHHHHHHHHHhCccccccCCcccCCceEEEEEcCCcchHHHHHHHH
Confidence 999864 12 2223578999999 999988741 222333347889999998622 468899
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1082 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1082 ~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
.++++.||+.|++|++++..++++++++++|++.|+|++|+||++|+++|+|+||+++ ++|..|+++++++.|.+.++.
T Consensus 309 ~~l~~~Lr~~Gi~v~~D~~~~~s~g~k~~~a~~~G~p~~iiiG~~el~~~~V~vr~r~-~eq~~v~~~el~~~l~~~l~~ 387 (477)
T 1hc7_A 309 QGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRL-GGKETLPLAALPEALPGKLDA 387 (477)
T ss_dssp HHHHHHHHHTTCCEEECCCSSSCHHHHHHHHHHTTCSEEEEECHHHHHTTEEEEEETT-SCCCEEEGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEEeCCCCCCHHHHHHHHhhcCCCEEEEECcchhcCCEEEEEEec-CceEEEeHHHHHHHHHHHHHH
Confidence 9999999999999998765357899999999999999999999999999999999999 999999999999999888776
Q ss_pred hccC
Q 001059 1162 QFRN 1165 (1170)
Q Consensus 1162 ~~~~ 1165 (1170)
.+++
T Consensus 388 ~~~~ 391 (477)
T 1hc7_A 388 FHEE 391 (477)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 223
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.8e-37 Score=350.09 Aligned_cols=256 Identities=20% Similarity=0.253 Sum_probs=196.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~---tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|.+.+.||+|+||+||+|.+.. ++..||||+++.........+.+.+|+.++++++||||+++++++.+...
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-- 110 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS-- 110 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc--
Confidence 4689999999999999999999875 45689999998766666666789999999999999999999998854310
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHH------hcCCCCHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE------SYDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~------~~~~l~e~~~~~i~~qI~ 503 (1170)
......|++|||++ ++|.+++. ....+++..++.++.||+
T Consensus 111 ---------------------------------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~ 157 (313)
T 3brb_A 111 ---------------------------------QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157 (313)
T ss_dssp -------------------------------------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHH
Confidence 11235799999997 59999884 234699999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
.||.|||++||+||||||+|||++.++.+||+|||+++....... ........+++.|+|||++.+
T Consensus 158 ~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~- 223 (313)
T 3brb_A 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY-------------YRQGRIAKMPVKWIAIESLAD- 223 (313)
T ss_dssp HHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC-----------------------------CCGGGSCHHHHHS-
T ss_pred HHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccc-------------cCcccccCCCccccCchhhcC-
Confidence 999999999999999999999999999999999999986532211 011233467889999999987
Q ss_pred CCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 584 PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
..++.++|||||||++|+|++ ||............. ....+......++++.++|.+||+.||.+|||+.++++
T Consensus 224 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 301 (313)
T 3brb_A 224 RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL--HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL 301 (313)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH--TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred CCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH--cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 568999999999999999997 665544433333322 23334444567789999999999999999999999997
Q ss_pred c
Q 001059 660 D 660 (1170)
Q Consensus 660 ~ 660 (1170)
+
T Consensus 302 ~ 302 (313)
T 3brb_A 302 Q 302 (313)
T ss_dssp H
T ss_pred H
Confidence 6
No 224
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.6e-37 Score=353.41 Aligned_cols=251 Identities=22% Similarity=0.317 Sum_probs=202.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc-----EEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGR-----HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~-----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||+||+|.+..+++ .||+|+++... .....+.+.+|+.+++.+ +||||++++++|..
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 121 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTH-- 121 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec--
Confidence 4789999999999999999999987664 79999987443 334567799999999999 89999999998732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc--------------CCCCH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--------------DHFDK 492 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--------------~~l~e 492 (1170)
...+|+|||||++ +|.+++... ..+++
T Consensus 122 --------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 163 (333)
T 2i1m_A 122 --------------------------------------GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAST 163 (333)
T ss_dssp --------------------------------------SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCH
T ss_pred --------------------------------------CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCH
Confidence 2356999999975 999988643 35899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCc
Q 001059 493 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 572 (1170)
Q Consensus 493 ~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 572 (1170)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ........||+
T Consensus 164 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~ 230 (333)
T 2i1m_A 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-------------YIVKGNARLPV 230 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTT-------------SEECSSCEECG
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccc-------------eeecCCCCCCc
Confidence 99999999999999999999999999999999999999999999999986532210 01123456889
Q ss_pred cCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCC
Q 001059 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648 (1170)
Q Consensus 573 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP 648 (1170)
.|+|||++.+ ..++.++|||||||++|||++ ||............... ...+......++++.++|.+||+.||
T Consensus 231 ~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p 308 (333)
T 2i1m_A 231 KWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD-GYQMAQPAFAPKNIYSIMQACWALEP 308 (333)
T ss_dssp GGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHH-TCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred cccCHHHhcc-CCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHhccCh
Confidence 9999999987 568999999999999999996 77654433333333332 22222334456799999999999999
Q ss_pred CCCCCHHHHHhc
Q 001059 649 SDRPSATELLQD 660 (1170)
Q Consensus 649 ~~RPta~eiL~~ 660 (1170)
.+|||+.+++++
T Consensus 309 ~~Rps~~~l~~~ 320 (333)
T 2i1m_A 309 THRPTFQQICSF 320 (333)
T ss_dssp GGSCCHHHHHHH
T ss_pred hhCcCHHHHHHH
Confidence 999999999975
No 225
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.6e-37 Score=350.80 Aligned_cols=249 Identities=23% Similarity=0.342 Sum_probs=200.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEE--EEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY--AVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~v--AVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
...++|++.+.||+|+||.||+|+++.+|..+ |+|.++.. ........+.+|+.+|+++ +||||+++++++.+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~--- 97 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--- 97 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEE---
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhhhceeeee---
Confidence 34589999999999999999999999888865 99988743 2233456789999999999 99999999998743
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------CCC
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFD 491 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~ 491 (1170)
...+|+|||||+ ++|.+++.... .++
T Consensus 98 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 140 (327)
T 1fvr_A 98 -------------------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140 (327)
T ss_dssp -------------------------------------TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSC
T ss_pred -------------------------------------CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCC
Confidence 357899999996 59999997654 699
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 001059 492 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571 (1170)
Q Consensus 492 e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 571 (1170)
+..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... .......+|
T Consensus 141 ~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~----------------~~~~~~~~~ 204 (327)
T 1fvr_A 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLP 204 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEE----------------CCC----CC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCcccccc----------------ccccCCCCC
Confidence 9999999999999999999999999999999999999999999999999743211 112334678
Q ss_pred ccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 572 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
+.|+|||++.+ ..++.++|||||||++|||++ ||......+...... .+..+......++++.+||.+||+.|
T Consensus 205 ~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~d 281 (327)
T 1fvr_A 205 VRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP--QGYRLEKPLNCDDEVYDLMRQCWREK 281 (327)
T ss_dssp TTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG--GTCCCCCCTTBCHHHHHHHHHHTCSS
T ss_pred ccccChhhhcc-ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhh--cCCCCCCCCCCCHHHHHHHHHHccCC
Confidence 99999999987 568999999999999999996 776655444433332 22223333456789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 001059 648 PSDRPSATELLQD 660 (1170)
Q Consensus 648 P~~RPta~eiL~~ 660 (1170)
|.+|||+.+++++
T Consensus 282 p~~Rps~~ell~~ 294 (327)
T 1fvr_A 282 PYERPSFAQILVS 294 (327)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999986
No 226
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-37 Score=344.49 Aligned_cols=253 Identities=20% Similarity=0.222 Sum_probs=199.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
-.|++.+.||+|+||+||+|.+..+++ .||+|++... ......+.+.+|+.+++.++||||++++++|.+.
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 94 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP----- 94 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-----
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC-----
Confidence 356778999999999999999876554 7999998642 3344567889999999999999999999987432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+++|||+. ++|.+++.. ...+++..++.++.||+.||+||
T Consensus 95 ----------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 140 (298)
T 3pls_A 95 ----------------------------------EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL 140 (298)
T ss_dssp ----------------------------------SSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 223489999985 699999876 45689999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++......... ........+|+.|+|||++.+ ..++.+
T Consensus 141 H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 208 (298)
T 3pls_A 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS-----------VQQHRHARLPVKWTALESLQT-YRFTTK 208 (298)
T ss_dssp HHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC-----------SCCSSCTTCGGGGSCHHHHTT-CCCCHH
T ss_pred HhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc-----------cccCcCCCCCccccChhhhcc-CCCChh
Confidence 99999999999999999999999999999998654322111 011234578999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|+|++ |+............+. ....++.....++.+.++|.+||+.||.+|||+.++++.
T Consensus 209 ~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 281 (298)
T 3pls_A 209 SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-QGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGE 281 (298)
T ss_dssp HHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh-cCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999997 4333222222222222 222333344567899999999999999999999999974
No 227
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=6.3e-37 Score=344.37 Aligned_cols=256 Identities=23% Similarity=0.240 Sum_probs=197.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|++..+|+.||||++...... ..+.+|+.+++.++|++++..+..+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~------- 75 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGA------- 75 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C----CCHHHHHHHHHHHTTSTTCCCEEEEEE-------
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc----hHHHHHHHHHHHhcCCCCCCeeeeecC-------
Confidence 347899999999999999999999999999999987654332 347889999999999998887766533
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.....|++||||+++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 76 --------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 123 (296)
T 4hgt_A 76 --------------------------------EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 123 (296)
T ss_dssp --------------------------------ETTEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457799999998899999874 4579999999999999999999999
Q ss_pred CCccccCCCCCceee---cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 512 QGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi---~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
+||+||||||+|||+ +.++.+||+|||+++............ ........||+.|+|||++.+ ..++.
T Consensus 124 ~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~-~~~~~ 194 (296)
T 4hgt_A 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIP--------YRENKNLTGTARYASINTHLG-IEQSR 194 (296)
T ss_dssp TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC--------CCCSCCCCSCGGGCCHHHHTT-CCCCH
T ss_pred CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCC--------CCcccccCCCccccchHHhcC-CCCCc
Confidence 999999999999999 788999999999998764332111000 012245689999999999988 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHH---HHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMER---QIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~---~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|+|++ ||...... ......... ....+......++++.+||.+||+.||.+|||+.++++.
T Consensus 195 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~ 274 (296)
T 4hgt_A 195 RDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHH
Confidence 9999999999999996 77643211 111111111 111111224457799999999999999999999999863
No 228
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.9e-37 Score=354.65 Aligned_cols=267 Identities=13% Similarity=0.246 Sum_probs=199.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC--------CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEee
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD--------GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFE 425 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t--------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e 425 (1170)
.++|++.+.||+|+||.||+|++..+ ++.||||++... ..+.+|+.+++.++||||+++++.+..
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 37899999999999999999999874 889999998743 357899999999999999986544311
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIV 503 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qI~ 503 (1170)
.... +. ..+.+.. ......+|+|||||+++|.+++... ..+++..++.++.||+
T Consensus 114 ~~~~----------~i-------------~~~~~~~-~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~ 169 (352)
T 2jii_A 114 TPLL----------AI-------------PTCMGFG-VHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLL 169 (352)
T ss_dssp CTTC----------SC-------------CCCCEEE-EETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHH
T ss_pred CCcc----------Cc-------------cchhhcc-ccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHH
Confidence 1000 00 0000000 0124678999999977999999876 7799999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCC--CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
.||+|||++||+||||||+|||++.++ .+||+|||+++.+......... .........||+.|+|||++.
T Consensus 170 ~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~ 241 (352)
T 2jii_A 170 DALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAY--------VEGSRSPHEGDLEFISMDLHK 241 (352)
T ss_dssp HHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCC--------CTTSSCTTCSCTTTCCHHHHT
T ss_pred HHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccc--------cccccccccCCccccCHHHHc
Confidence 999999999999999999999999988 8999999999876433211000 011124458999999999998
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchh-HHHHHHHHh---hhcC-CCC---CccccCCHHHHHHHHHccCCCCCC
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAM-ERQIVLSDL---KQKG-ELP---PSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~-~~~~~~~~l---~~~~-~~p---~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
+ ..++.++|||||||++|||++ ||.... ......... .... .++ ..+...++++.+||.+||+.||.+
T Consensus 242 ~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 320 (352)
T 2jii_A 242 G-CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEE 320 (352)
T ss_dssp T-CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTC
T ss_pred c-CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhh
Confidence 8 568999999999999999997 777653 222211111 1111 111 122355789999999999999999
Q ss_pred CCCHHHHHhc
Q 001059 651 RPSATELLQD 660 (1170)
Q Consensus 651 RPta~eiL~~ 660 (1170)
|||+.++++.
T Consensus 321 Rps~~~l~~~ 330 (352)
T 2jii_A 321 KPPYAMLRNN 330 (352)
T ss_dssp CCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999999864
No 229
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-36 Score=349.54 Aligned_cols=253 Identities=20% Similarity=0.278 Sum_probs=197.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
...++|++.+.||+|+||+||+|.++.++ ..||||+++.. ........+.+|+.+++.++||||+++++++..
T Consensus 41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 117 (333)
T 1mqb_A 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-- 117 (333)
T ss_dssp CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--
T ss_pred CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec--
Confidence 34578999999999999999999987553 45999999743 334455678999999999999999999998732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||++ +|.+++... ..+++..++.++.||+.|
T Consensus 118 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~a 159 (333)
T 1mqb_A 118 --------------------------------------YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159 (333)
T ss_dssp --------------------------------------SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 3467999999975 999998764 569999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|+|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..
T Consensus 160 L~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~ 226 (333)
T 1mqb_A 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE------------ATYTTSGGKIPIRWTAPEAISY-RK 226 (333)
T ss_dssp HHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------------------CCCGGGSCHHHHHS-CC
T ss_pred HHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccc------------cccccCCCCccccccCchhccc-CC
Confidence 9999999999999999999999999999999999987542210 0011223457889999999987 56
Q ss_pred CCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 586 IDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++.++|||||||++|||++ ||......+...... .+..++.....++++.++|.+||+.||.+||++.+++++
T Consensus 227 ~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 227 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN--DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH--TTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred CCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH--CCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 8999999999999999986 776655544433332 222333344667899999999999999999999999875
No 230
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.6e-37 Score=351.05 Aligned_cols=264 Identities=25% Similarity=0.393 Sum_probs=185.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.+|++.+.||+|+||.||+|++..+|+.||||++... .......+.+|+.+++++. ||||+++++++.....
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~----- 100 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE----- 100 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT-----
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccc-----
Confidence 4799999999999999999999999999999998643 3345567899999999996 9999999998853210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES---YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~---~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
........+|++||||+|+|.+++.. ...+++..++.++.||+.||+|||
T Consensus 101 ---------------------------~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (337)
T 3ll6_A 101 ---------------------------ESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153 (337)
T ss_dssp ---------------------------TSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------ccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 01123567899999999999998864 456999999999999999999999
Q ss_pred hCC--ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc--CCCCC
Q 001059 511 GQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ--GWPKI 586 (1170)
Q Consensus 511 s~g--IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~~ 586 (1170)
++| |+||||||+|||++.++.+||+|||+++.......... ...............||+.|+|||++. ....+
T Consensus 154 ~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 230 (337)
T 3ll6_A 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSW---SAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPI 230 (337)
T ss_dssp TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC----------------------------------CCTTSCS
T ss_pred hCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccc---cccccccchhhccccCCCCcCChhhhhccccCCC
Confidence 999 99999999999999999999999999987543211000 000000011123457999999999984 22458
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|+|++ ||......... ......+ .....++.+.+||++||+.||.+|||+.+++++
T Consensus 231 ~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 231 GEKQDIWALGCILYLLCFRQHPFEDGAKLRIV----NGKYSIP-PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp SHHHHHHHHHHHHHHHHHSSCCC----------------CCCC-TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred ChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh----cCcccCC-cccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 899999999999999997 77544332222 1112222 223445678999999999999999999999987
No 231
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=7.3e-37 Score=351.65 Aligned_cols=250 Identities=22% Similarity=0.346 Sum_probs=201.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-------cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEee
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-------LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 425 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-------~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e 425 (1170)
.++|++.+.||+|+||+||+|++. .++..||||+++.. ........+.+|+.+++.+ +||||++++++|..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC-CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 478999999999999999999986 45788999998743 3444567799999999999 99999999998732
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------- 488 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------- 488 (1170)
...+|+|||||+ ++|.+++....
T Consensus 113 ----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 152 (334)
T 2pvf_A 113 ----------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152 (334)
T ss_dssp ----------------------------------------SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------
T ss_pred ----------------------------------------CCceEEEEECCCCCcHHHHHHHhccccccccccccccccc
Confidence 345799999997 59999997653
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 489 ~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .......
T Consensus 153 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~ 219 (334)
T 2pvf_A 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-------------YKKTTNG 219 (334)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSS-------------EECCSCC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccccccccccccc-------------ccccCCC
Confidence 389999999999999999999999999999999999999999999999999986532210 1112344
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.+|+.|+|||++.+ ..++.++|||||||++|||++ ||......+..... . ....++.....++++.++|.+||
T Consensus 220 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~~~l 296 (334)
T 2pvf_A 220 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-K-EGHRMDKPANCTNELYMMMRDCW 296 (334)
T ss_dssp CCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-H-HTCCCCCCTTCCHHHHHHHHHHT
T ss_pred CcccceeChHHhcC-CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHH-h-cCCCCCCCccCCHHHHHHHHHHc
Confidence 67899999999987 568999999999999999986 67655444433222 2 22233334466789999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
+.||.+|||+.+++++
T Consensus 297 ~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 297 HAVPSQRPTFKQLVED 312 (334)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred cCChhhCcCHHHHHHH
Confidence 9999999999999975
No 232
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.7e-37 Score=352.04 Aligned_cols=253 Identities=22% Similarity=0.288 Sum_probs=198.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEE-----EccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCK-----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~-----~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
..++|++.+.||+|+||.||+|+ +..++..||||++... .......++.+|+.++++++||||+++++++.+
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 104 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-- 104 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC--
Confidence 35789999999999999999999 5567889999998633 344456689999999999999999999998733
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-------CCCHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------HFDKELAWHLF 499 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------~l~e~~~~~i~ 499 (1170)
...+|+|||||+ ++|.+++.... .+++..++.++
T Consensus 105 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~ 146 (327)
T 2yfx_A 105 --------------------------------------SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146 (327)
T ss_dssp --------------------------------------SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHH
T ss_pred --------------------------------------CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHH
Confidence 234689999995 59999997653 48999999999
Q ss_pred HHHHHHHHHHHhCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 001059 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 500 ~qI~~gL~yLHs~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
.||+.||.|||++||+||||||+|||++. +..+||+|||+++........ .......||+.|+|
T Consensus 147 ~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~a 213 (327)
T 2yfx_A 147 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-------------RKGGCAMLPVKWMP 213 (327)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC-------------------CCGGGSCGGGCC
T ss_pred HHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccccccccccc-------------ccCCCcCCCcceeC
Confidence 99999999999999999999999999984 446999999999865322110 11234578999999
Q ss_pred cccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC
Q 001059 577 PEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 652 (1170)
Q Consensus 577 PE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP 652 (1170)
||++.+ ..++.++|||||||++|+|++ ||......+...... ....+......++.+.++|.+||+.||.+||
T Consensus 214 PE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 290 (327)
T 2yfx_A 214 PEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT--SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 290 (327)
T ss_dssp HHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HhHhcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh--cCCCCCCCCCCCHHHHHHHHHHhcCChhhCc
Confidence 999987 568999999999999999996 666554444333322 2223333445678999999999999999999
Q ss_pred CHHHHHhccC
Q 001059 653 SATELLQDAL 662 (1170)
Q Consensus 653 ta~eiL~~~~ 662 (1170)
|+.+++++.+
T Consensus 291 s~~~ll~~l~ 300 (327)
T 2yfx_A 291 NFAIILERIE 300 (327)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999999853
No 233
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.4e-37 Score=344.13 Aligned_cols=248 Identities=23% Similarity=0.314 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|++.+.||+|+||+||+|++..+ +..||+|+++.. ......+.+.+|+.+++.++||||+++++++.+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 84 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE----- 84 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT-SCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-----
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc-cCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----
Confidence 47899999999999999999997643 446999998743 334456789999999999999999999988621
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
...|++|||++ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 85 ------------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 128 (281)
T 3cc6_A 85 ------------------------------------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 128 (281)
T ss_dssp ------------------------------------SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHH
Confidence 23489999997 59999987654 59999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||++........ .......+|+.|+|||++.+ ..++.
T Consensus 129 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~ 193 (281)
T 3cc6_A 129 LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY--------------YKASVTRLPIKWMSPESINF-RRFTT 193 (281)
T ss_dssp HHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----------------------CCCCCGGGCCHHHHHH-CCCCH
T ss_pred HHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccc--------------cccccCCCCcceeCchhhcc-CCCCc
Confidence 9999999999999999999999999999999986532211 11233467889999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|+|++ ||........... +. ....++.....++.+.++|.+||+.||.+|||+.+++++
T Consensus 194 ~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 194 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-LE-KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHH-HH-HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhccHHHHHHHHHHHhCCCCCcccCChHHHHHH-Hh-cCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 9999999999999986 6654333322222 22 222233334567899999999999999999999999976
No 234
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=6.3e-37 Score=348.67 Aligned_cols=262 Identities=25% Similarity=0.350 Sum_probs=200.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.++.+|+.||||++... .....+.+.+|+.+++.++||||+++++++....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 99 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRER------ 99 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE------
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc------
Confidence 36799999999999999999999999999999998653 3345678899999999999999999999885320
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.....+|+|||||++ +|.+++.. ...+++..++.++.||+.||+|
T Consensus 100 ------------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~ 149 (317)
T 2buj_A 100 ------------------------------GAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149 (317)
T ss_dssp ------------------------------TTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 124578999999975 99998875 4569999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC--CC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KI 586 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~ 586 (1170)
||++||+||||||+|||++.++.+||+|||++............. ..........||+.|+|||++.+.. .+
T Consensus 150 LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 223 (317)
T 2buj_A 150 IHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQA------LTLQDWAAQRCTISYRAPELFSVQSHCVI 223 (317)
T ss_dssp HHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHH------HHHHHHHHHHSCGGGCCGGGSSCCSEEEE
T ss_pred HHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccccccc------ccccccccccCCcccCCHhHhccCCCcCC
Confidence 999999999999999999999999999999987543211000000 0000112346899999999987632 26
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHH-HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQ-IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~-~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|+|++ ||....... ....... .....+.....++++.++|.+||+.||.+|||+.+++++
T Consensus 224 ~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 224 DERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ-NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH-CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh-ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 889999999999999997 664322111 1111111 222223345567899999999999999999999999986
No 235
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.1e-37 Score=345.16 Aligned_cols=252 Identities=21% Similarity=0.252 Sum_probs=197.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..|++.+.||+|+||+||+|.+..++ ..||+|.+.. .......+.+.+|+.++++++||||++++++|.+.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 98 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----- 98 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETT-CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-----
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEeccc-CCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC-----
Confidence 57999999999999999999976433 3689998864 23444567899999999999999999999886432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|++||||++ +|.+++.. ...+++..++.++.||+.||+||
T Consensus 99 ----------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~l 144 (298)
T 3f66_A 99 ----------------------------------EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 144 (298)
T ss_dssp ----------------------------------SSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 3456899999975 99999975 34589999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++......... ........||+.|+|||++.+ ..++.+
T Consensus 145 H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 212 (298)
T 3f66_A 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-----------VHNKTGAKLPVKWMALESLQT-QKFTTK 212 (298)
T ss_dssp HHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCB-----------C-----CCBCGGGSCHHHHHH-CCCCHH
T ss_pred HhCCccCCCCchheEEECCCCCEEECcccccccccccchhc-----------cccccCCCCCccccChHHhcC-CCCChH
Confidence 99999999999999999999999999999998654322110 112244578899999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|+|++ ||.............. ...+......++.+.++|.+||+.||.+|||+.++++.
T Consensus 213 ~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 285 (298)
T 3f66_A 213 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 285 (298)
T ss_dssp HHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhc--CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999997 5544443333333332 22222234456789999999999999999999999974
No 236
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=352.83 Aligned_cols=250 Identities=24% Similarity=0.360 Sum_probs=194.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEE----EEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~v----AVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..++|++++.||+|+||+||+|++..+|+.+ |+|.+... ........+.+|+.+++.++||||++++++|..
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 88 (327)
T 3lzb_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT--- 88 (327)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES---
T ss_pred CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec---
Confidence 3578999999999999999999998888765 66666432 233446789999999999999999999998742
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+++|+|+. ++|.+++.. ...+++..++.++.||+.||
T Consensus 89 --------------------------------------~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL 130 (327)
T 3lzb_A 89 --------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130 (327)
T ss_dssp --------------------------------------SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 12578888886 699998876 45699999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ ..+
T Consensus 131 ~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~-------------~~~~~~~~~t~~y~aPE~~~~-~~~ 196 (327)
T 3lzb_A 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-------------EYHAEGGKVPIKWMALESILH-RIY 196 (327)
T ss_dssp HHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----------------------------CCCGGGSCHHHHHH-CCC
T ss_pred HHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc-------------cccccCCCccccccCHHHHcC-CCC
Confidence 999999999999999999999999999999999987542211 111233467889999999987 568
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|||++ ||......+.... +. ....++.....++++.+||++||+.||.+|||+.++++.
T Consensus 197 ~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 272 (327)
T 3lzb_A 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-LE-KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH-HH-TTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH-HH-cCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 999999999999999986 6765444333222 22 233333445567899999999999999999999999974
No 237
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-36 Score=342.33 Aligned_cols=249 Identities=20% Similarity=0.261 Sum_probs=201.8
Q ss_pred CCceEEe-eeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQ-PLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~-~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|.+.+ .||+|+||.||+|.++ .++..||||+++.. ......+.+.+|+.+++.++||||+++++++.
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------- 80 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------- 80 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-------
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-------
Confidence 5677777 9999999999999864 46888999999754 33445678999999999999999999998872
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||++ +|.+++... ..+++..++.++.||+.||.||
T Consensus 81 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l 126 (287)
T 1u59_A 81 ----------------------------------AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 126 (287)
T ss_dssp ----------------------------------SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHH
Confidence 1347999999975 999988644 4699999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++........ ........||+.|+|||++.+ ..++.+
T Consensus 127 H~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 193 (287)
T 1u59_A 127 EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY------------YTARSAGKWPLKWYAPECINF-RKFSSR 193 (287)
T ss_dssp HHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE------------ECCCCSSCCCGGGCCHHHHHH-CEECHH
T ss_pred HHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcce------------eeccccccccccccCHHHhcc-CCCCch
Confidence 9999999999999999999999999999999865322110 111233467899999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|||++ ||......+...... .+..++.....++++.++|.+||+.||.+||++.+++++
T Consensus 194 ~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 194 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE--QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHh--cCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999996 776555444333322 233334445677899999999999999999999999986
No 238
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.4e-37 Score=374.15 Aligned_cols=247 Identities=22% Similarity=0.300 Sum_probs=203.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.++.++..||||+++.... ..+.+.+|+.+|++++||||++++++|..
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~-------- 287 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------- 287 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc---chHHHHHHHHHHHhcCCCCEeeEEEEEec--------
Confidence 4689999999999999999999998899999999875432 35679999999999999999999998832
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ |+|.+++... ..+++..++.++.||+.||+|||
T Consensus 288 --------------------------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH 335 (495)
T 1opk_A 288 --------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335 (495)
T ss_dssp --------------------------------SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345699999997 6999999764 45899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++...... ........+|+.|+|||++.+ ..++.++
T Consensus 336 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~s 400 (495)
T 1opk_A 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--------------YTAHAGAKFPIKWTAPESLAY-NKFSIKS 400 (495)
T ss_dssp HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC--------------EECCTTCCCCGGGCCHHHHHH-CEECHHH
T ss_pred hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc--------------eeecCCCcCCcceeCHhHHhc-CCCCcHH
Confidence 9999999999999999999999999999998653211 111233467889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||+||||++ ||......+.. ..+. ....++....+++++.+||.+||+.||.+|||+.++++.
T Consensus 401 DvwSlG~~l~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~ 472 (495)
T 1opk_A 401 DVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 472 (495)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCGGGHH-HHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHhHHHHHHHHHhCCCCCCCCCCHHHHH-HHHH-cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 99999999999996 66554433332 2222 222333345667899999999999999999999999864
No 239
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.2e-36 Score=339.88 Aligned_cols=245 Identities=27% Similarity=0.356 Sum_probs=199.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+. ++..||||+++.... ..+.+.+|+.+|+.++||||+++++++.
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------- 78 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVT--------- 78 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEEC---------
T ss_pred HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEc---------
Confidence 368999999999999999999986 677899999975433 2467899999999999999999998762
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++.... .+++..++.++.||+.||+|||
T Consensus 79 --------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH 126 (279)
T 1qpc_A 79 --------------------------------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126 (279)
T ss_dssp --------------------------------SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123689999996 69999987543 6999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++
T Consensus 127 ~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 191 (279)
T 1qpc_A 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY--------------TAREGAKFPIKWTAPEAINY-GTFTIKS 191 (279)
T ss_dssp HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE--------------ECCTTCCCCTTTSCHHHHHH-CEECHHH
T ss_pred HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc--------------ccccCCCCccCccChhhhcc-CCCCchh
Confidence 99999999999999999999999999999986532210 11233467889999999986 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++|||++ ||......+....... ...+......++++.++|.+||+.||.+|||+.++++.
T Consensus 192 Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 263 (279)
T 1qpc_A 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER--GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 263 (279)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhc--ccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 99999999999996 7765554444333322 22223334567899999999999999999999999863
No 240
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.8e-37 Score=342.01 Aligned_cols=241 Identities=24% Similarity=0.386 Sum_probs=192.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.+. |+.||||+++... ..+.+.+|+.+++.++||||+++++++.+.
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 86 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 86 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC-------
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-------
Confidence 578999999999999999999885 8999999986432 346789999999999999999999987432
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH--FDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+||||+++ +|.+++..... +++..++.++.||+.||+|||
T Consensus 87 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH 134 (278)
T 1byg_A 87 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134 (278)
T ss_dssp ----------------------------------CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH
Confidence 2357999999975 99999876543 899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++...... .....+|+.|+|||++.+ ..++.++
T Consensus 135 ~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~ 195 (278)
T 1byg_A 135 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 195 (278)
T ss_dssp HTTCCCSCCSGGGEEECTTSCEEECCCCC------------------------------CCTTTSCHHHHHH-CCCCHHH
T ss_pred hCCccccCCCcceEEEeCCCcEEEeecccccccccc------------------ccCCCccccccCHHHhCC-CCCCchh
Confidence 999999999999999999999999999999754311 122367889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||+++|+|++ ||......+...... .+..+......++.+.++|++||+.||.+|||+.++++.
T Consensus 196 Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 267 (278)
T 1byg_A 196 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE--KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 267 (278)
T ss_dssp HHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh--cCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHH
Confidence 99999999999986 665544333332222 222333445667899999999999999999999999864
No 241
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.3e-36 Score=347.32 Aligned_cols=253 Identities=27% Similarity=0.388 Sum_probs=200.0
Q ss_pred CCc-eEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDF-EELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y-~~~~~LG~G~fG~Vyka~~----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++| ++++.||+|+||+||+|.+ ..+|+.||||+++.. ........+.+|+.+|+.++||||+++++++.+.
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 105 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA--- 105 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET---
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC---
Confidence 444 9999999999999988865 347899999999754 3445567799999999999999999999998542
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|+|||||+ ++|.+++... .+++..++.++.||+.||+|
T Consensus 106 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~ 149 (318)
T 3lxp_A 106 -----------------------------------GAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAY 149 (318)
T ss_dssp -----------------------------------TTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHH
Confidence 2457899999997 5999988764 49999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++....... .........||+.|+|||++.+ ..++.
T Consensus 150 LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~ 216 (318)
T 3lxp_A 150 LHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE------------YYRVREDGDSPVFWYAPECLKE-YKFYY 216 (318)
T ss_dssp HHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS------------EEEC---CCCCGGGCCHHHHHH-CEEEH
T ss_pred HHhCCccCCCCchheEEEcCCCCEEECCcccccccccccc------------ccccccCCCCCceeeChHHhcC-CCCCc
Confidence 9999999999999999999999999999999986532210 0111234568899999999987 56889
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHH-------------HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQ-------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 652 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~-------------~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP 652 (1170)
++|||||||++|+|++ ||....... ............++.....++++.+||++||+.||.+||
T Consensus 217 ~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp 296 (318)
T 3lxp_A 217 ASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRP 296 (318)
T ss_dssp HHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCc
Confidence 9999999999999997 554332210 111112223334444556778999999999999999999
Q ss_pred CHHHHHhc
Q 001059 653 SATELLQD 660 (1170)
Q Consensus 653 ta~eiL~~ 660 (1170)
|+.++++.
T Consensus 297 s~~ell~~ 304 (318)
T 3lxp_A 297 TFENLIPI 304 (318)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999863
No 242
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9.4e-37 Score=364.22 Aligned_cols=254 Identities=30% Similarity=0.459 Sum_probs=188.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|...+.||+|+||+||.+ ...+|+.||||++... ..+.+.+|+.+|+.+ +|||||++++++.
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~--------- 79 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSET--------- 79 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEE---------
T ss_pred heeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEe---------
Confidence 45666788999999999875 4558999999998642 235678999999887 8999999998863
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCC-------CHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHF-------DKELAWHLFRQIVEGL 506 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l-------~e~~~~~i~~qI~~gL 506 (1170)
....+|+|||||+++|.+++...... ++..++.++.||+.||
T Consensus 80 -------------------------------~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL 128 (434)
T 2rio_A 80 -------------------------------TDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128 (434)
T ss_dssp -------------------------------CSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHH
T ss_pred -------------------------------cCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHH
Confidence 24678999999999999999765433 2334578999999999
Q ss_pred HHHHhCCccccCCCCCceeecCC-------------CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDAR-------------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~-------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 573 (1170)
+|||++||+||||||+|||++.+ +.+||+|||+|+....... .........+||+.
T Consensus 129 ~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~-----------~~~~~~~~~~gt~~ 197 (434)
T 2rio_A 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS-----------SFRTNLNNPSGTSG 197 (434)
T ss_dssp HHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-------------------------CCT
T ss_pred HHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCc-----------cceeeecCCCCCCC
Confidence 99999999999999999999754 4899999999987542210 00111234589999
Q ss_pred CCCcccccC------CCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCC----ccccCCHHHHHH
Q 001059 574 YTAPEIEQG------WPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPP----SWVAKFSEQESL 639 (1170)
Q Consensus 574 Y~APE~l~~------~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~----~~~~~~~e~~~L 639 (1170)
|+|||++.+ ...++.++|||||||++|||++ ||......+. ..+......+. .....++++.+|
T Consensus 198 y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~l 275 (434)
T 2rio_A 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGIFSLDEMKCLHDRSLIAEATDL 275 (434)
T ss_dssp TSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH--HHHHTCCCCCCCTTCCCHHHHHHHHHH
T ss_pred ccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH--HHhcCCCCcccccccccccchHHHHHH
Confidence 999999865 2458999999999999999996 7765433332 12222222211 112334688999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|.+||+.||.+|||+.++++||||....
T Consensus 276 i~~~L~~dP~~Rps~~eil~hp~f~~~~ 303 (434)
T 2rio_A 276 ISQMIDHDPLKRPTAMKVLRHPLFWPKS 303 (434)
T ss_dssp HHHHTCSSGGGSCCHHHHHTSGGGSCHH
T ss_pred HHHHhhCChhhCCCHHHHHhCCccCCcH
Confidence 9999999999999999999999997654
No 243
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-37 Score=359.03 Aligned_cols=252 Identities=21% Similarity=0.267 Sum_probs=190.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..|++.+.||+|+||+||+|++..++ ..||||.++.. ........+.+|+.++++++||||++++++|.+.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----- 162 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----- 162 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC-----
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-----
Confidence 35888999999999999999986443 46899988643 3334567899999999999999999999887432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|+|||||+ ++|.+++... ..+++..++.++.||+.||+||
T Consensus 163 ----------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L 208 (373)
T 3c1x_A 163 ----------------------------------EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 208 (373)
T ss_dssp ----------------------------------SSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 235689999997 5999999765 4589999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++......... ........+|+.|+|||++.+ ..++.+
T Consensus 209 H~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 276 (373)
T 3c1x_A 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-----------VHNKTGAKLPVKWMALESLQT-QKFTTK 276 (373)
T ss_dssp HHTTCCCSCCCGGGEEECTTCCEEECCC--------------------------------CCGGGSCHHHHHH-CCCCHH
T ss_pred HHCCEecCccchheEEECCCCCEEEeecccccccccccccc-----------ccccCCCCCcccccChHHhcC-CCCCcH
Confidence 99999999999999999999999999999998653221110 111234568899999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|||++ ||......+...... .+..+.....+++.+.++|.+||+.||.+|||+.+++++
T Consensus 277 ~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~--~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 277 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp HHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999997 565443333322222 222333334567899999999999999999999999975
No 244
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.6e-36 Score=364.19 Aligned_cols=245 Identities=24% Similarity=0.339 Sum_probs=196.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.+. .+..||||+++..... .+.+.+|+.+|++++||||+++++++.+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------- 250 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-------- 250 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcC--------
Confidence 468999999999999999999997 4567999998754332 4679999999999999999999988621
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
..+|+|||||+ |+|.+++.. ...+++..++.++.||+.||+|||
T Consensus 251 ---------------------------------~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH 297 (452)
T 1fmk_A 251 ---------------------------------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297 (452)
T ss_dssp ---------------------------------SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23689999996 599999974 346999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++
T Consensus 298 ~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~s 362 (452)
T 1fmk_A 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 362 (452)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------------------------CCGGGSCHHHHHH-CCCCHHH
T ss_pred hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce--------------ecccCCcccccccCHhHHhc-CCCCccc
Confidence 99999999999999999999999999999986532210 01123457889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++|||++ ||......+...... .+..++....+++.+.+||.+||+.||.+|||+.++++.
T Consensus 363 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~ 434 (452)
T 1fmk_A 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVE--RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 434 (452)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999997 776655555443332 222333344677899999999999999999999999863
No 245
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.6e-36 Score=378.44 Aligned_cols=244 Identities=22% Similarity=0.286 Sum_probs=197.7
Q ss_pred eeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|.+. .+++.||||+++.........+.+.+|+.+|+.++|||||+++++|.
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-------------- 440 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-------------- 440 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE--------------
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--------------
Confidence 47999999999999664 56789999999765555555678999999999999999999999872
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+++|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 441 ---------------------------~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHr 493 (635)
T 4fl3_A 441 ---------------------------AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 493 (635)
T ss_dssp ---------------------------SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred ---------------------------cCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCC
Confidence 123689999997 5999999988889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+|+.+...... ....+...||+.|+|||++.+ ..++.++|||||||
T Consensus 494 DLkp~NILl~~~~~~kL~DFGla~~~~~~~~~------------~~~~~~~~~t~~y~APE~~~~-~~~~~~sDvwSlGv 560 (635)
T 4fl3_A 494 DLAARNVLLVTQHYAKISDFGLSKALRADENY------------YKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGV 560 (635)
T ss_dssp CCSGGGEEEEETTEEEECCTTHHHHTTC-------------------------CGGGSCHHHHHH-CCCCHHHHHHHHHH
T ss_pred CCChHhEEEeCCCCEEEEEcCCccccccCccc------------cccccCCCCceeeeChhhhcC-CCCCcHHHHHHHHH
Confidence 99999999999999999999999876432110 111234467899999999987 56999999999999
Q ss_pred HHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 598 VFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 598 iL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||++ ||......+...... .+..++....+++++.+||.+||+.||.+|||+.++++.
T Consensus 561 ~l~ellt~G~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~ 625 (635)
T 4fl3_A 561 LMWEAFSYGQKPYRGMKGSEVTAMLE--KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 625 (635)
T ss_dssp HHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 9999996 787665555443333 233333445677899999999999999999999999864
No 246
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.7e-37 Score=354.82 Aligned_cols=252 Identities=26% Similarity=0.327 Sum_probs=196.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...++|++.+.||+|+||+||+|+++ +|+.||||++.... ....+.+.+|+.+++.++||||++++++|.+
T Consensus 36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 106 (321)
T 2qkw_B 36 EATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDE------ 106 (321)
T ss_dssp CCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCC------
T ss_pred HHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC------
Confidence 34578999999999999999999975 79999999876443 2345679999999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----CCCHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----HFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||
T Consensus 107 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l 152 (321)
T 2qkw_B 107 ----------------------------------RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152 (321)
T ss_dssp ----------------------------------TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHH
Confidence 345699999997 59998886543 589999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ ..+
T Consensus 153 ~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~ 218 (321)
T 2qkw_B 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ-------------THLSTVVKGTLGYIDPEYFIK-GRL 218 (321)
T ss_dssp HHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSC-------------CCCBCCCEEETTTCCHHHHHH-CBC
T ss_pred HHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccc-------------cccccccCCCccccCHHHhcC-CCC
Confidence 999999999999999999999999999999999975421110 011234569999999999987 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHH-----HHHHHhhhcCCC---------CCccccCCHHHHHHHHHccCCCCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQ-----IVLSDLKQKGEL---------PPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~-----~~~~~l~~~~~~---------p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
+.++|||||||++|||++ ||....+.+ ...........+ .......++.+.+++.+||+.||.
T Consensus 219 ~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~ 298 (321)
T 2qkw_B 219 TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSE 298 (321)
T ss_dssp CTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGG
T ss_pred CcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcc
Confidence 999999999999999997 665332110 000000001111 111123345788999999999999
Q ss_pred CCCCHHHHHhc
Q 001059 650 DRPSATELLQD 660 (1170)
Q Consensus 650 ~RPta~eiL~~ 660 (1170)
+|||+.+++++
T Consensus 299 ~Rps~~ell~~ 309 (321)
T 2qkw_B 299 DRPSMGDVLWK 309 (321)
T ss_dssp GSCCHHHHHHH
T ss_pred cCcCHHHHHHH
Confidence 99999999976
No 247
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-37 Score=362.03 Aligned_cols=253 Identities=23% Similarity=0.363 Sum_probs=198.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|+++.+|+.||||+++.... ....+.+.+|+.+|+.++||||+++++++.+.
T Consensus 7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~------ 79 (396)
T 4eut_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEET------ 79 (396)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT------
T ss_pred CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccC------
Confidence 34689999999999999999999999999999999974322 22346788999999999999999999987432
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|+|||||+ ++|.+++..... +++..++.++.||+.||+|
T Consensus 80 --------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~ 127 (396)
T 4eut_A 80 --------------------------------TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127 (396)
T ss_dssp --------------------------------TTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 2346799999996 599999876443 9999999999999999999
Q ss_pred HHhCCccccCCCCCceee----cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-
Q 001059 509 IHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW- 583 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi----~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~- 583 (1170)
||++||+||||||+|||+ +.++.+||+|||+++...... .....+||+.|+|||++.+.
T Consensus 128 LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~ 191 (396)
T 4eut_A 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----------------QFVSLYGTEEYLHPDMYERAV 191 (396)
T ss_dssp HHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG----------------GSSCSSSCCTTCCHHHHHHHC
T ss_pred HHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC----------------ccccccCCccccCHHHhhccc
Confidence 999999999999999999 777889999999998653221 12345799999999998641
Q ss_pred ------CCCCccchhHHHHHHHHHhhc---CCCch----hHHHHHHHHhhhcCC-------------------CCC---c
Q 001059 584 ------PKIDEKADMYSLGIVFFELWH---PFSTA----MERQIVLSDLKQKGE-------------------LPP---S 628 (1170)
Q Consensus 584 ------~~~~~ksDIwSlGviL~ELlt---Pf~~~----~~~~~~~~~l~~~~~-------------------~p~---~ 628 (1170)
..++.++|||||||++|||++ ||.+. ...+.....+..... .+. .
T Consensus 192 ~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (396)
T 4eut_A 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSL 271 (396)
T ss_dssp C--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSS
T ss_pred cccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCccccc
Confidence 246789999999999999997 76532 223333333332211 010 0
Q ss_pred cccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 629 WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 629 ~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
....++.+.++|++||..||.+|||+.+++++
T Consensus 272 ~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 272 SRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp CHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred chHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 01223467899999999999999999999864
No 248
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.1e-36 Score=341.71 Aligned_cols=253 Identities=25% Similarity=0.353 Sum_probs=194.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEcc-CCc--EEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKL-DGR--HYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~-tg~--~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..++|++.+.||+|+||+||+|++.. +++ .||||+++.... .....+.+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 92 (291)
T 1u46_A 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT--- 92 (291)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc---
Confidence 35789999999999999999999753 333 699999875432 23456789999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL 506 (1170)
...+++|||++ ++|.+++... ..+++..++.++.||+.||
T Consensus 93 --------------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l 134 (291)
T 1u46_A 93 --------------------------------------PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 134 (291)
T ss_dssp --------------------------------------SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHH
Confidence 12589999997 6999988764 5699999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..+
T Consensus 135 ~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~ 201 (291)
T 1u46_A 135 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD------------HYVMQEHRKVPFAWCAPESLKT-RTF 201 (291)
T ss_dssp HHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC------------EEEC-----CCGGGCCHHHHHH-CEE
T ss_pred HHHHhCCcccCCCchheEEEcCCCCEEEcccccccccccccc------------chhhhccCCCCceeeCchhhcC-CCC
Confidence 999999999999999999999999999999999986532210 0111234568889999999987 568
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++||||||+++|+|++ ||......+....... ....++.....++++.++|.+||+.||.+|||+.+++++
T Consensus 202 ~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 278 (291)
T 1u46_A 202 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 278 (291)
T ss_dssp EHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHc-cCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 999999999999999996 7766555554444333 333344445677899999999999999999999999874
No 249
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=345.19 Aligned_cols=253 Identities=27% Similarity=0.402 Sum_probs=199.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++++.||+|+||.||+|++ ..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 114 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--- 114 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec---
Confidence 46899999999999999999994 568999999998743 334567899999999999999999999987432
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....+|+||||++ ++|.+++... ..+++..++.++.||+.||+
T Consensus 115 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~ 159 (326)
T 2w1i_A 115 -----------------------------------GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 159 (326)
T ss_dssp --------------------------------------CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 1235799999997 5999999875 45999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..++
T Consensus 160 ~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~ 226 (326)
T 2w1i_A 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE------------YYKVKEPGESPIFWYAPESLTE-SKFS 226 (326)
T ss_dssp HHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCS------------EEECSSCCSCCGGGCCHHHHHH-CEEE
T ss_pred HHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhcccccc------------ccccccCCCCceeEECchhhcC-CCCC
Confidence 99999999999999999999999999999999986532210 0011233467889999999987 4689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHH---------------HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMER---------------QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~---------------~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
.++|||||||++|||++ ||...... ......+. ....++.....++++.+||++||+.||.
T Consensus 227 ~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~ 305 (326)
T 2w1i_A 227 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK-NNGRLPRPDGCPDEIYMIMTECWNNNVN 305 (326)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHSCSSGG
T ss_pred chhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh-cCCCCCCCCcccHHHHHHHHHHcCCChh
Confidence 99999999999999997 44322110 01112222 2223334456778999999999999999
Q ss_pred CCCCHHHHHhc
Q 001059 650 DRPSATELLQD 660 (1170)
Q Consensus 650 ~RPta~eiL~~ 660 (1170)
+|||+.++++.
T Consensus 306 ~Rps~~el~~~ 316 (326)
T 2w1i_A 306 QRPSFRDLALR 316 (326)
T ss_dssp GSCCHHHHHHH
T ss_pred hCcCHHHHHHH
Confidence 99999999864
No 250
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.7e-37 Score=355.14 Aligned_cols=251 Identities=25% Similarity=0.328 Sum_probs=193.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|++. +|+.||||++...... .....+.+|+.+++.++||||++++++|..
T Consensus 29 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 98 (326)
T 3uim_A 29 SDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMT-------- 98 (326)
T ss_dssp TTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECC--------
T ss_pred hhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEEEec--------
Confidence 468899999999999999999865 7999999998754322 122368899999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----~l~e~~~~~i~~qI~~gL~y 508 (1170)
....++|||||+ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 99 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~ 146 (326)
T 3uim_A 99 --------------------------------PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAY 146 (326)
T ss_dssp --------------------------------SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHH
Confidence 345689999996 59999997643 39999999999999999999
Q ss_pred HHhC---CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 509 IHGQ---GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 509 LHs~---gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
||++ ||+||||||+|||++.++.+||+|||+++...... ........||+.|+|||++.+ ..
T Consensus 147 lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~-~~ 211 (326)
T 3uim_A 147 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD--------------THVTTAVRGTIGHIAPEYLST-GK 211 (326)
T ss_dssp HHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSS--------------SCEECCCCSCGGGCCHHHHHH-SE
T ss_pred HHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccc--------------ccccccccCCcCccCHHHhcc-CC
Confidence 9999 99999999999999999999999999998653211 011233469999999999977 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHH-------HHHHHHhhhcCCC---------CCccccCCHHHHHHHHHccCC
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMER-------QIVLSDLKQKGEL---------PPSWVAKFSEQESLLRRLMSP 646 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~-------~~~~~~l~~~~~~---------p~~~~~~~~e~~~LI~~~L~~ 646 (1170)
++.++|||||||++|+|++ ||...... ............. +......++.+.+++.+||+.
T Consensus 212 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 291 (326)
T 3uim_A 212 SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 291 (326)
T ss_dssp ECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCS
T ss_pred CCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCc
Confidence 8999999999999999997 66422110 0011110001100 111122335789999999999
Q ss_pred CCCCCCCHHHHHhcc
Q 001059 647 SPSDRPSATELLQDA 661 (1170)
Q Consensus 647 dP~~RPta~eiL~~~ 661 (1170)
||.+|||+.+++++.
T Consensus 292 dP~~Rps~~ell~~L 306 (326)
T 3uim_A 292 SPMERPKMSEVVRML 306 (326)
T ss_dssp CGGGSCCHHHHHHHH
T ss_pred CCccCCCHHHHHHHh
Confidence 999999999999874
No 251
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.8e-36 Score=345.14 Aligned_cols=259 Identities=22% Similarity=0.350 Sum_probs=188.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHH--HHhccCCCceeEEEEEeecCcc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT--LSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~i--L~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..+++|++.+.||+|+||+||+|++ +|+.||||+++... ...+..|..+ ++.++||||+++++.+....
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-- 80 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVT-- 80 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC--
T ss_pred cChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccc--
Confidence 3468999999999999999999977 58999999997432 2334444444 55689999999998763321
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
......+|+|||||+ ++|.+++... ..++..++.++.||+.||+|
T Consensus 81 ---------------------------------~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~ 126 (336)
T 3g2f_A 81 ---------------------------------ADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAY 126 (336)
T ss_dssp ---------------------------------TTSCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------cCCCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHH
Confidence 012456899999996 5999998654 45899999999999999999
Q ss_pred HHhC---------CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 001059 509 IHGQ---------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 509 LHs~---------gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
||++ ||+||||||+|||++.++.+||+|||+++.+........ ..........+||+.|+|||+
T Consensus 127 LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~-------~~~~~~~~~~~gt~~y~aPE~ 199 (336)
T 3g2f_A 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP-------GEEDNAAISEVGTIRYMAPEV 199 (336)
T ss_dssp HHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC----------------CCTTSCGGGCCHHH
T ss_pred HHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCc-------cccccccccCCCccceeCchh
Confidence 9999 999999999999999999999999999987543221100 001112345689999999999
Q ss_pred ccCC------CCCCccchhHHHHHHHHHhhc---CCCchhH-----------------HHHHHHHhhh---cCCCCCccc
Q 001059 580 EQGW------PKIDEKADMYSLGIVFFELWH---PFSTAME-----------------RQIVLSDLKQ---KGELPPSWV 630 (1170)
Q Consensus 580 l~~~------~~~~~ksDIwSlGviL~ELlt---Pf~~~~~-----------------~~~~~~~l~~---~~~~p~~~~ 630 (1170)
+.+. ..++.++|||||||++|||++ ||..... .......... ...+|..+.
T Consensus 200 ~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (336)
T 3g2f_A 200 LEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK 279 (336)
T ss_dssp HTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC
T ss_pred hcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccc
Confidence 9863 235678999999999999985 4432110 0111111111 122333222
Q ss_pred c---CCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 631 A---KFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 631 ~---~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
. .++++.+||.+||+.||.+|||+.++++.
T Consensus 280 ~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~ 312 (336)
T 3g2f_A 280 ENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312 (336)
T ss_dssp CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cccchHHHHHHHHHHHhcCChhhCcchHHHHHH
Confidence 2 33578999999999999999999999863
No 252
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=372.07 Aligned_cols=249 Identities=20% Similarity=0.263 Sum_probs=196.6
Q ss_pred CCceEEe-eeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQ-PLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~-~LG~G~fG~Vyka~~~~--tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+++.+.. .||+|+||+||+|.++. ++..||||+++... .....+.+.+|+.+|+.++|||||+++++|..
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------ 407 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------ 407 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------
Confidence 4556666 89999999999998863 46679999997542 23346789999999999999999999998721
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
..+|+|||||+ |+|.+++... ..+++..++.++.||+.||+||
T Consensus 408 -----------------------------------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~L 452 (613)
T 2ozo_A 408 -----------------------------------EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 452 (613)
T ss_dssp -----------------------------------SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 24799999997 5899988654 4599999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++.+...... ........+|+.|+|||++.+ ..++.+
T Consensus 453 H~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~------------~~~~~~~~~~~~y~APE~~~~-~~~~~~ 519 (613)
T 2ozo_A 453 EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY------------YTARSAGKWPLKWYAPECINF-RKFSSR 519 (613)
T ss_dssp HHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------------------CCTTSCHHHHHH-CCCCHH
T ss_pred HHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce------------eeeccCCCCccceeCHhhhcC-CCCCcH
Confidence 9999999999999999999999999999999875322100 011123456789999999987 579999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|||++ ||......+....+. .+..++....+++++.+||.+||+.||.+||++.++++.
T Consensus 520 sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~ 592 (613)
T 2ozo_A 520 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE--QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 592 (613)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH--cCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 999999999999996 777655555443332 233333445677899999999999999999999999863
No 253
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.9e-36 Score=366.64 Aligned_cols=245 Identities=24% Similarity=0.340 Sum_probs=200.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.+. .+..||||+++..... .+.+.+|+.+|++++||||+++++++.+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 333 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-------- 333 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEee--------
Confidence 468999999999999999999997 4567999999754332 4679999999999999999999988721
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
..+|||||||. ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 334 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH 380 (535)
T 2h8h_A 334 ---------------------------------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 380 (535)
T ss_dssp ---------------------------------SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999997 5999999743 46999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++
T Consensus 381 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~s 445 (535)
T 2h8h_A 381 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 445 (535)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH--------------HTTCSTTSCGGGSCHHHHHH-CCCCHHH
T ss_pred hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce--------------ecccCCcCcccccCHHHhcc-CCCCchh
Confidence 99999999999999999999999999999986542211 01123457889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||+||||++ ||......+...... .+...+....+++++.+||.+||+.||++|||+.+|++.
T Consensus 446 DvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 517 (535)
T 2h8h_A 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVE--RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 517 (535)
T ss_dssp HHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999997 776655554443332 222233334667899999999999999999999999863
No 254
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-36 Score=343.72 Aligned_cols=255 Identities=23% Similarity=0.365 Sum_probs=190.3
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc--cCCCceeEEEEEeecC
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL--QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l--~HpnIV~l~~~~~e~~ 427 (1170)
.....++|++.+.||+|+||.||+|++. |+.||||++... ......+|.+++..+ +||||+++++++....
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 3445689999999999999999999986 899999998632 233455566666554 9999999999885421
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
.....+|+|||||++ +|.+++.. ..+++..++.++.||+.||
T Consensus 105 ------------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l 147 (337)
T 3mdy_A 105 ------------------------------------GSWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGL 147 (337)
T ss_dssp ------------------------------------GGGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCCCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHH
Confidence 123578999999974 99999865 4699999999999999999
Q ss_pred HHHHhC--------CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcc
Q 001059 507 AHIHGQ--------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578 (1170)
Q Consensus 507 ~yLHs~--------gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 578 (1170)
+|||++ ||+||||||+|||++.++.+||+|||+++........ ........+||+.|+|||
T Consensus 148 ~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE 216 (337)
T 3mdy_A 148 CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE-----------VDIPPNTRVGTKRYMPPE 216 (337)
T ss_dssp HHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC--------------------CCSSCSCGGGCCHH
T ss_pred HHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeecccccc-----------ccCCCCCCccCcceeChh
Confidence 999999 9999999999999999999999999999765322110 111123468999999999
Q ss_pred cccCCCCCCc------cchhHHHHHHHHHhhcC-------------CCchh----HHHHHHHHhhhcC---CCCCcc--c
Q 001059 579 IEQGWPKIDE------KADMYSLGIVFFELWHP-------------FSTAM----ERQIVLSDLKQKG---ELPPSW--V 630 (1170)
Q Consensus 579 ~l~~~~~~~~------ksDIwSlGviL~ELltP-------------f~~~~----~~~~~~~~l~~~~---~~p~~~--~ 630 (1170)
++.+. .+.. ++|||||||++|||++. |.... ............. ..|..+ .
T Consensus 217 ~~~~~-~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (337)
T 3mdy_A 217 VLDES-LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSD 295 (337)
T ss_dssp HHTTC-CCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGS
T ss_pred hcccc-cCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhh
Confidence 99873 3444 39999999999999862 32211 1111222222111 122211 1
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 631 AKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 631 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.+++++.+||.+||+.||.+|||+.+++++
T Consensus 296 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 296 ECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 345678999999999999999999999986
No 255
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=346.27 Aligned_cols=253 Identities=25% Similarity=0.349 Sum_probs=196.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|.+.. .||+|+++.........+.+.+|+.++++++||||+++++++.+
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------- 100 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS------- 100 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-------
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-------
Confidence 35789999999999999999999863 49999997654444444567889999999999999999998743
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++||||+ ++|.+++.... .+++..++.++.||+.||+|||
T Consensus 101 ---------------------------------~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH 147 (319)
T 2y4i_B 101 ---------------------------------PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147 (319)
T ss_dssp ---------------------------------SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 59999997654 6999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--------
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-------- 582 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-------- 582 (1170)
++||+||||||+|||++ ++.+||+|||+++......... .........||+.|+|||++.+
T Consensus 148 ~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~----------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~ 216 (319)
T 2y4i_B 148 AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR----------REDKLRIQNGWLCHLAPEIIRQLSPDTEED 216 (319)
T ss_dssp HTTCCCCCCCSTTEEEC---CCEECCCSCCC--------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CC
T ss_pred hCCccccCCChhhEEEe-CCCEEEeecCCccccccccccc----------cccccccCCCcccccChHHhhhcccccccc
Confidence 99999999999999998 6899999999987643211100 0111234569999999999875
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
...++.++|||||||++|||++ ||............... ...+......++++.++|.+||+.||.+|||+.++++
T Consensus 217 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 217 KLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG-MKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTT-CCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccC-CCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 2347899999999999999997 88766555444333322 2222222345678999999999999999999999987
Q ss_pred c
Q 001059 660 D 660 (1170)
Q Consensus 660 ~ 660 (1170)
.
T Consensus 296 ~ 296 (319)
T 2y4i_B 296 M 296 (319)
T ss_dssp H
T ss_pred H
Confidence 4
No 256
>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1
Probab=100.00 E-value=6.4e-36 Score=356.78 Aligned_cols=335 Identities=9% Similarity=0.072 Sum_probs=266.7
Q ss_pred ccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc---CCCcccccceEEEeccC----C
Q 001059 706 AGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHG----G 774 (1170)
Q Consensus 706 ~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~----G 774 (1170)
++-++....++|+.||+|.++.+++.|++.++++|+++||++|.||+| ++. ++.+.+.++||+|.|++ |
T Consensus 18 ~~li~~~~~~~G~~d~lP~g~~l~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~~~G~~~~~~~emy~~~d~g~~~~~ 97 (459)
T 1nj8_A 18 AEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLD 97 (459)
T ss_dssp TSSCBCCSTTSSCCBBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHCSSSGGGGGGCEEEEESSSSEEE
T ss_pred CCCccccCCCCceEEECChHHHHHHHHHHHHHHHHHHcCCEEeeCCcccCHHHHhhhcCcccccchhhEEEeccCcccCC
Confidence 344444356799999999999999999999999999999999999999 332 23466789999999987 8
Q ss_pred ceeeecCCCCHHHHHHHHhC----CCCceeEEEecCeEEcCCC-CC---CCCcee-EeEEEEeCCCCcccHHH---HHHH
Q 001059 775 DLLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRAIG-HS---PPNRYL-QGDFDIIGGASALTEAE---VLKV 842 (1170)
Q Consensus 775 ~~laLRPD~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e~~-~~---~~~ef~-Q~GvEiiG~~~~~aDaE---vi~l 842 (1170)
+.++|||+.|++++|+++.+ +..|+|+||+|+|||+|++ +. |.|||+ |+|++++|.....+|+| +|.+
T Consensus 98 ~~l~LRP~~~~~i~~~~~~~~~s~r~LP~rl~qig~~fR~E~~~~rGl~R~REF~qq~d~~~~~~~~~~a~~e~~~~i~~ 177 (459)
T 1nj8_A 98 VKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISI 177 (459)
T ss_dssp EEEEECSSSHHHHHHHHHTTCCBTTSCCCCEEEEECCBCCCCSCCBTTTBCSBCSCEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CeeEECCCCcHHHHHHHHHhhhhcccCCeEEEEEccEecCccCCCCCceEeeeeeccCcEEEEECCHHHHHHHHHHHHHH
Confidence 99999999999999999864 3569999999999999987 64 556799 99999999998899998 8999
Q ss_pred HHHHHHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHH
Q 001059 843 TMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVV 922 (1170)
Q Consensus 843 a~~~l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 922 (1170)
+.++++.||+. +.+.+++. .++.
T Consensus 178 ~~~~~~~LGl~--~~~~~~~~--------------------------~ek~----------------------------- 200 (459)
T 1nj8_A 178 YKKFFDTLGIP--YLISKRPE--------------------------WDKF----------------------------- 200 (459)
T ss_dssp HHHHHHHHTCC--CEEEEECT--------------------------TSCC-----------------------------
T ss_pred HHHHHHHCCCc--eEEeecCc--------------------------hhhc-----------------------------
Confidence 99999999995 77776641 0100
Q ss_pred HHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccc
Q 001059 923 NRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATL 1002 (1170)
Q Consensus 923 ~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~ 1002 (1170)
.|.. ....++..+.-|..++.|++|+. +
T Consensus 201 ----------~ga~--------------------------------~~~~ie~~~~dg~~~e~gt~~~l---g------- 228 (459)
T 1nj8_A 201 ----------PGAE--------------------------------YTMAFDTIFPDGRTMQIATVHNL---G------- 228 (459)
T ss_dssp ----------TTCS--------------------------------EEEEEEEECTTSCEEEEEEEEEE---E-------
T ss_pred ----------CCcc--------------------------------cceeEEEEcCCCcEEEEEEEeec---c-------
Confidence 0100 00112222223677889999864 1
Q ss_pred cccceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhcc-C-----CCCCCCCCCCceEEEEEc-CCC
Q 001059 1003 VEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP-V-----DFKPVRNEAGTSVLVCSR-GGG 1075 (1170)
Q Consensus 1003 ~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~-~-----~~~~~~~~~~~~vlv~~~-~~~ 1075 (1170)
...+.+.|+||++.- | ....++++||++| +|++.+|. . +...+...+|.+|+|+++ +.+
T Consensus 229 -~~~s~~~~~~Y~~~~---G---------~~~~v~~~~~Gig-eRli~alie~~~d~~gl~~P~~laP~qv~Iipi~~~~ 294 (459)
T 1nj8_A 229 -QNFSKTFEIIFETPT---G---------DKDYAYQTCYGIS-DRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKG 294 (459)
T ss_dssp -THHHHHTTCEEECTT---S---------SEEECEEEEEEEC-THHHHHHHHHHCBTTBCCCCTTSCSSSEEEEECCCSS
T ss_pred -cccccccCeEEECCC---C---------CEeeeeEeeccHH-HHHHHHHHHHhCCCceeEcCCcCCCCcEEEEecccCC
Confidence 123688999998741 2 1123578999999 99998874 2 122333457889999998 522
Q ss_pred ---ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHH
Q 001059 1076 ---GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLV 1152 (1170)
Q Consensus 1076 ---~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~ 1152 (1170)
....+|.++++.||+. ++|++++. ++++++++++|++.|+|++|+||++|+++|+|+||++++++|..|++++++
T Consensus 295 ~~~~~~~~a~~l~~~Lr~~-i~v~~D~~-~~~~g~k~~~a~~~G~p~~iiiG~~el~~~~V~vr~r~t~eq~~v~~~el~ 372 (459)
T 1nj8_A 295 KEDIVMEKAKEIYEKLKGK-FRVHIDDR-DIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLM 372 (459)
T ss_dssp CHHHHHHHHHHHHHHHHTT-SCEEECCS-CSCHHHHHHHHHHTTCSEEEEECHHHHHTTEEEEEETTTCCEEEEETTSHH
T ss_pred cHHHHHHHHHHHHHHHhhh-cEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhcCCEEEEEECCCCceEEEeHHHHH
Confidence 5788999999999999 99998876 679999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccC
Q 001059 1153 RFLLDAIASQFRN 1165 (1170)
Q Consensus 1153 ~~l~~~l~~~~~~ 1165 (1170)
+.|.+.++..+++
T Consensus 373 ~~l~~~l~~~~~~ 385 (459)
T 1nj8_A 373 EVVEKTLNNIMEN 385 (459)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9998887665543
No 257
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A
Probab=100.00 E-value=4.6e-37 Score=368.95 Aligned_cols=367 Identities=12% Similarity=0.096 Sum_probs=263.2
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC--CCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
.+.|++||+|.++.+++.|++.++++|.++||++|.||+| ++.. +.+.+.++||+| |++|+.++||||.|+++
T Consensus 37 ~~~G~~d~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sg~~~~~~~emy~~-d~~~~~l~LRP~~t~~i 115 (471)
T 3a32_A 37 TGAGVPLFSLGGGPIRYALAEVLAKFHARRGYYVVETPIIASTELFKVSGHIEFYRNNMYLF-DIEGHEFAVKPMNCPYH 115 (471)
T ss_dssp HCTTCCCBCTTHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHTCCCTTGGGGSEEE-EETTEEEEECSCSHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHHHHHHHHcCCEEEECCeeeehHHhhhccCccccccceEEE-ecCCcEEEEccccHHHH
Confidence 5799999999999999999999999999999999999999 3322 345678999999 99999999999999999
Q ss_pred HHHHHhC----C---CCceeEEEecCeEEcCCCC--C---CCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHH-cCC
Q 001059 788 IRWAISN----Q---KSSFKRYEISSVYRRAIGH--S---PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTR-FFH 852 (1170)
Q Consensus 788 aR~~~~~----~---~~P~r~~Y~g~VfR~e~~~--~---~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~-lgi 852 (1170)
+|+++.+ + ..|+|+||+|+|||+|+++ . |.|||+|+|+|+||.++..+| +|+|.++.++|+. ||+
T Consensus 116 ~~~~~~~~~s~r~~~~lP~rl~~~g~vfR~E~~~~~~Gl~R~REF~Q~~~e~f~~~~~~~de~~e~i~~~~~~l~~~lGl 195 (471)
T 3a32_A 116 ILLFLNEVAKHRSKLPLPFKVFEFGRVHRYEPSGSIYGLLRVRGFTQDDAHIIVPGGRVIDVVYDVFEEMKLVLERLFKL 195 (471)
T ss_dssp HHHHHHHHHHHGGGSCSSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHhhhhhccccccCCeEEeeccceeccCCCcccccceeEEEEEECCeEEEcChHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9988764 3 6799999999999998766 3 567799999999999999999 9999999999999 999
Q ss_pred ----CcceEEEeCcHH--HH-HHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHH
Q 001059 853 ----AESCDIHLNHGD--LL-EAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRL 925 (1170)
Q Consensus 853 ----~~~~~i~lg~~~--il-~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 925 (1170)
.+ +.|.+||+. ++ +.+ +|....+.+ ....+ .+.+ +..+...++.....+.+
T Consensus 196 ~~~~~~-~~l~i~~~~~~~~~e~~---~g~~~~~d~-~~~~l----------------~~~~-~~~l~~~~~~~~~~~~~ 253 (471)
T 3a32_A 196 GVSSET-FKVRLSMSDKSLIGKEF---MGSKEEWEG-AEEAL----------------REAA-SRINEKYGIDIVELEGE 253 (471)
T ss_dssp CCSTTT-EEEEEECCCGGGBTTTB---CSCHHHHHH-HHHHH----------------HHHH-HHHHHHHCCEEEEETTC
T ss_pred CcCCCC-eEEEEecCCCCcccccc---cCCHHHHHH-HHHHH----------------HHHH-HHHHHhcCCceEecccc
Confidence 64 999999973 11 111 122211110 00000 0011 11111122211000000
Q ss_pred HHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCC--ccc----ceEEEEEeccCCCc
Q 001059 926 QTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIES--YHR----NLFFQVFSVKEKYP 999 (1170)
Q Consensus 926 ~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgld--YYt----G~VFe~~~~~~~~~ 999 (1170)
..+ .|+. +...+..+. .++.++ ...| .+.+|++++|+++ ||| |++ +.+..+ .
T Consensus 254 ~~~----~gp~------i~~~l~d~~---~~l~~~--~~~g---~~~lD~~l~r~~d~~Yyt~~~~G~~-e~~~i~--~- 311 (471)
T 3a32_A 254 AAF----YGPK------LDFIMMVEE---SGVSKE--WQMG---TIQFDFNLPRRFRLYDVVREEFGIE-EVYIIH--R- 311 (471)
T ss_dssp SBT----TBCE------EEEEEEEES---SSCEEE--EEEE---EEEEESSHHHHTTHHHHHHHHHCCS-CEEEEE--E-
T ss_pred hhh----CCCc------cceEEeccH---Hhhhhh--heee---eEEecccccccCCceEeccccCCce-eeEEEe--c-
Confidence 000 0110 000000000 000000 0112 5899999999999 999 998 664311 0
Q ss_pred ccccccceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHh-hccC-CCCCCCCCCCceEEEEEcCC---
Q 001059 1000 ATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQ-HYPV-DFKPVRNEAGTSVLVCSRGG--- 1074 (1170)
Q Consensus 1000 ~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~-~L~~-~~~~~~~~~~~~vlv~~~~~--- 1074 (1170)
...| |+|||+. +++. +...+...+|.+|+|++.+.
T Consensus 312 -------------------------------------~i~G---gieRli~~lie~~~g~~p~~~ap~qv~Iip~~~~~~ 351 (471)
T 3a32_A 312 -------------------------------------ALLG---SIERFLGVYLEHRRGRMPFTLAPIQFAVIAVKTGGE 351 (471)
T ss_dssp -------------------------------------EEEE---EHHHHHHHHHHHTTTCCCGGGCSCSEEEEEEECSST
T ss_pred -------------------------------------cccC---cHHHHHHHHHHHhCCCCCCCcCCceEEEEEccCccc
Confidence 1222 7899985 4453 22222224678899998852
Q ss_pred --CccHHHHHHHHHHHHHcCCeEEEee-CCCCCHHHHHHHHH-hCCCcEEEEEcCCcccCCeEEEEEcCCCc--ccccch
Q 001059 1075 --GGLLVERMELVAELWEENIKAQFVP-VPDPSLTEQYEYAS-EHDIKCLVILTDTGAQKGLVKVRHLDVKK--EKEVQR 1148 (1170)
Q Consensus 1075 --~~~~~~a~~ia~~LR~~Gi~v~~~~-~~~~~l~k~~~~A~-~~gi~~~iiig~~e~~~~~v~vk~l~~~e--q~~v~~ 1148 (1170)
+....+|.++++.||+.|++|+++. . +.++++++++|+ +.|+|++|+||++|+++|+|+||++++++ +..|++
T Consensus 352 ~~~~~~~~a~~i~~~Lr~~Gi~v~~D~~~-~~~~g~k~~~a~~~~gip~~iiiG~~e~~~~~V~vr~r~~~~q~~~~v~~ 430 (471)
T 3a32_A 352 VDREIEDLASSIAKGLLDKGFRVAVKGSS-KTGLSSDVRHIESTAKPAVNVFIGAKEVREKVLDVRVFDLESMKRRRLAI 430 (471)
T ss_dssp THHHHHHHHHHHHHHHHHTTCEEEEEEEE-TTTHHHHHHHHHHTTCCSEEEEECHHHHHHTEEEEEEEETTTTEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHCCCEEEEecCC-CCCHHHHHHHHHHhcCCCEEEEECchhhhCCEEEEEECCCCccceEEEee
Confidence 3467899999999999999999888 5 568999999999 99999999999999999999999999998 688888
Q ss_pred H-----HHHHHHHHHHHhhccCC
Q 001059 1149 E-----SLVRFLLDAIASQFRNP 1166 (1170)
Q Consensus 1149 ~-----~l~~~l~~~l~~~~~~~ 1166 (1170)
+ ++++.|.++|....+|+
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~ 453 (471)
T 3a32_A 431 AYGDAADAVENLAAVAEELESPV 453 (471)
T ss_dssp ECSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHH
Confidence 8 88888888887666553
No 258
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=9.3e-36 Score=337.49 Aligned_cols=246 Identities=23% Similarity=0.337 Sum_probs=190.9
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC--CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
...+.||+|+||.||+|.+ +++.||||++.... ......+.+.+|+.+++.++||||+++++++.+
T Consensus 34 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---------- 101 (307)
T 2nru_A 34 VGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD---------- 101 (307)
T ss_dssp TTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECS----------
T ss_pred ccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEec----------
Confidence 3457899999999999986 58999999986532 223456789999999999999999999998732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES---YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~---~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++|||++ ++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 102 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 151 (307)
T 2nru_A 102 ------------------------------GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151 (307)
T ss_dssp ------------------------------SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 345699999996 699998864 3459999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++...... .........||+.|+|||++.+ .++.++|
T Consensus 152 ~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-------------~~~~~~~~~g~~~y~aPE~~~~--~~~~~~D 216 (307)
T 2nru_A 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA-------------QTVMTSRIVGTTAYMAPEALRG--EITPKSD 216 (307)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCS-------------SCEECSSCCSCGGGCCHHHHTT--EECTHHH
T ss_pred CCeecCCCCHHHEEEcCCCcEEEeeccccccccccc-------------ccccccccCCCcCcCChHHhcC--CCCccch
Confidence 999999999999999999999999999998643211 0011234579999999999876 4799999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHH---HHHHHhhh---------cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQ---IVLSDLKQ---------KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~---~~~~~l~~---------~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
||||||++|+|++ ||....... ........ ...++......++.+.++|.+||+.||.+|||+.+
T Consensus 217 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 296 (307)
T 2nru_A 217 IYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKK 296 (307)
T ss_dssp HHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred hHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHH
Confidence 9999999999997 665432211 01111100 01122222333457889999999999999999999
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
++++
T Consensus 297 l~~~ 300 (307)
T 2nru_A 297 VQQL 300 (307)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
No 259
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.4e-35 Score=355.95 Aligned_cols=255 Identities=22% Similarity=0.270 Sum_probs=198.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.++||+|+||.||+|++..+|+.||||++...... ..+.+|+.+++.++|++++..+..|..
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~------- 73 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGV------- 73 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEE-------
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEe-------
Confidence 457899999999999999999999999999999998755432 347889999999988655554444321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.....|+|||||+++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 74 --------------------------------~~~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~ 121 (483)
T 3sv0_A 74 --------------------------------EGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 121 (483)
T ss_dssp --------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------eCCEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457799999998899999975 4579999999999999999999999
Q ss_pred CCccccCCCCCceee---cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 512 QGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi---~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
+||+||||||+|||| +.++.+||+|||+++.+......... ........+||+.|+|||++.+ ..++.
T Consensus 122 ~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~--------~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ 192 (483)
T 3sv0_A 122 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHI--------PYRENKNLTGTARYASVNTHLG-IEQSR 192 (483)
T ss_dssp TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBC--------CCCCCCCCCSCTTTCCHHHHTT-CCCCH
T ss_pred CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccccc--------ccccccccCCCccccCHHHhcC-CCCCh
Confidence 999999999999999 57899999999999876432211100 0112245689999999999988 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 589 KADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
++|||||||+||||++ ||..... .+....+... ...+......+++++.+||.+||+.||.+||++.+|++
T Consensus 193 ~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 193 RDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999997 7764321 1211111111 11111222456779999999999999999999999976
No 260
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=9.4e-36 Score=346.86 Aligned_cols=241 Identities=14% Similarity=0.172 Sum_probs=187.0
Q ss_pred cCCceEEeeeccCCcEEEEEE-----EEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc---CCCceeEEEEEee
Q 001059 354 LNDFEELQPLGHGGFGHVVLC-----KNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFE 425 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka-----~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~---HpnIV~l~~~~~e 425 (1170)
.++|.+.+.||+|+||+||+| .+..+++.||||+++.. ....+.+|+.+++.++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 467999999999999999999 46778999999998632 2346778888888886 9999999998843
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-----cCCCCHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-----YDHFDKELAWHLF 499 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-----~~~l~e~~~~~i~ 499 (1170)
....|+|||||+ |+|.+++.. ...+++..++.++
T Consensus 139 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~ 178 (365)
T 3e7e_A 139 ----------------------------------------QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFA 178 (365)
T ss_dssp ----------------------------------------SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHH
T ss_pred ----------------------------------------CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHH
Confidence 345799999996 699999974 4569999999999
Q ss_pred HHHHHHHHHHHhCCccccCCCCCceeecC-----------CCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDA-----------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 500 ~qI~~gL~yLHs~gIiHrDLKp~NILi~~-----------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.||+.||+|||++||+||||||+|||++. ++.+||+|||+|+.+..... ....+..
T Consensus 179 ~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~ 245 (365)
T 3e7e_A 179 MRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK-------------GTIFTAK 245 (365)
T ss_dssp HHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCT-------------TEEECCS
T ss_pred HHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCC-------------Cceeeee
Confidence 99999999999999999999999999998 89999999999975431110 0112456
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccC
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~ 645 (1170)
+||+.|||||++.+ ..|+.++|||||||++|||++ ||....... ......+... ...+.+.+++..||+
T Consensus 246 ~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~l~ 317 (365)
T 3e7e_A 246 CETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-----CKPEGLFRRL--PHLDMWNEFFHVMLN 317 (365)
T ss_dssp SCTTSCCCHHHHTT-CCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----EEECSCCTTC--SSHHHHHHHHHHHHC
T ss_pred cCCCCCCChHHhcC-CCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----eeechhcccc--CcHHHHHHHHHHHcC
Confidence 89999999999998 558999999999999999997 665433211 0001111111 224577899999999
Q ss_pred CCCCCCCCHHHHHhc
Q 001059 646 PSPSDRPSATELLQD 660 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~ 660 (1170)
.+|.+|++..+.+.+
T Consensus 318 ~~p~~r~~~~~~l~~ 332 (365)
T 3e7e_A 318 IPDCHHLPSLDLLRQ 332 (365)
T ss_dssp CCCTTCCCCHHHHHH
T ss_pred CCCCCcchHHHHHHH
Confidence 999999655444443
No 261
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.6e-35 Score=331.35 Aligned_cols=240 Identities=27% Similarity=0.408 Sum_probs=189.6
Q ss_pred CCCCccccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHH-HhccCCCceeEEEEEe
Q 001059 347 SLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATL-SRLQHQHVVRYYQAWF 424 (1170)
Q Consensus 347 ~~~~~~~~~~y~~~-~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL-~~l~HpnIV~l~~~~~ 424 (1170)
.+..+...++|.+. +.||+|+||.||+|.++.+|+.||||+++. ...+.+|+.++ +.++||||++++++|.
T Consensus 9 ~~~~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~ 81 (299)
T 3m2w_A 9 QIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYE 81 (299)
T ss_dssp CCBCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred cCcccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhh
Confidence 34456778999998 779999999999999999999999999863 24577899888 5569999999999874
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcC--CCCHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD--HFDKELAWHLFRQ 501 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~--~l~e~~~~~i~~q 501 (1170)
.. ......+|+|||||++ +|.+++.... .+++..++.++.|
T Consensus 82 ~~------------------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~q 125 (299)
T 3m2w_A 82 NL------------------------------------YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125 (299)
T ss_dssp EE------------------------------------ETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHH
T ss_pred hh------------------------------------cCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 31 0124678999999974 9999998754 6999999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 578 (1170)
|+.||+|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 126 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---------------------------------- 171 (299)
T 3m2w_A 126 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---------------------------------- 171 (299)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----------------------------------
T ss_pred HHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc----------------------------------
Confidence 999999999999999999999999998 7889999999986421
Q ss_pred cccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhh----hcCCCC-CccccCCHHHHHHHHHccCCCCCC
Q 001059 579 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK----QKGELP-PSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 579 ~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~----~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
+ ..++.++|||||||++|||++ ||.............. .....+ +.+...++++.+||.+||+.||.+
T Consensus 172 ---~-~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 247 (299)
T 3m2w_A 172 ---G-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ 247 (299)
T ss_dssp ---T-CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred ---c-ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhh
Confidence 0 236789999999999999997 7765443322111110 011111 123457789999999999999999
Q ss_pred CCCHHHHHhccCCCCch
Q 001059 651 RPSATELLQDALPPQME 667 (1170)
Q Consensus 651 RPta~eiL~~~~~~~~~ 667 (1170)
|||+.++++|||+.+..
T Consensus 248 Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 248 RMTITEFMNHPWIMQST 264 (299)
T ss_dssp SCCHHHHHTSHHHHTGG
T ss_pred CCCHHHHhcChhhcccc
Confidence 99999999999987653
No 262
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.4e-35 Score=367.73 Aligned_cols=248 Identities=23% Similarity=0.339 Sum_probs=200.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|++.+.||+|+||+||+|.+..+ +..||||+++.. ......+.+.+|+.+|+.++||||+++++++.+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----- 462 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----- 462 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 46899999999999999999999754 457999988643 334455789999999999999999999988721
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
..+|+|||||+ |+|.+++.... .+++..++.++.||+.||+|
T Consensus 463 ------------------------------------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~ 506 (656)
T 2j0j_A 463 ------------------------------------NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506 (656)
T ss_dssp ------------------------------------SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 23689999997 69999997654 69999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++...... ........||+.|+|||++.+ ..++.
T Consensus 507 LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~--------------~~~~~~~~~t~~y~aPE~~~~-~~~~~ 571 (656)
T 2j0j_A 507 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST--------------YYKASKGKLPIKWMAPESINF-RRFTS 571 (656)
T ss_dssp HHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------------------------CCGGGCCHHHHHH-CCCCH
T ss_pred HHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCc--------------ceeccCCCCCcceeCHHHhcC-CCCCc
Confidence 999999999999999999999999999999998653221 011233467889999999987 57899
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||++ ||......+....+.. +..++....+++.+.+||.+||+.||.+|||+.++++.
T Consensus 572 ~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~ 645 (656)
T 2j0j_A 572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN--GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 645 (656)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--CCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 9999999999999985 7776655554443332 23333345677899999999999999999999999864
No 263
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.5e-35 Score=336.06 Aligned_cols=254 Identities=23% Similarity=0.331 Sum_probs=194.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHh--ccCCCceeEEEEEeecCcc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--l~HpnIV~l~~~~~e~~~~ 429 (1170)
...++|++.+.||+|+||+||+|.+ +|+.||||+++.. ....+.+|+.+++. ++||||+++++++....
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-- 109 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDN-- 109 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC--
T ss_pred cccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC--
Confidence 3457899999999999999999998 4999999998632 34567889999988 79999999999874421
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.....+|+|||||++ +|.+++.. ..+++..++.++.||+.||+|
T Consensus 110 ----------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~ 154 (342)
T 1b6c_B 110 ----------------------------------GTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAH 154 (342)
T ss_dssp ----------------------------------SSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHH
Confidence 112368999999975 99999975 469999999999999999999
Q ss_pred HH--------hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 001059 509 IH--------GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580 (1170)
Q Consensus 509 LH--------s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 580 (1170)
|| ++||+||||||+|||++.++.+||+|||+++........ .........||+.|+|||++
T Consensus 155 lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~ 223 (342)
T 1b6c_B 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT-----------IDIAPNHRVGTKRYMAPEVL 223 (342)
T ss_dssp HHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTE-----------EEECCCSCCCCGGGCCHHHH
T ss_pred HHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccc-----------cccccccCCcCcccCCHhhh
Confidence 99 899999999999999999999999999999865422100 01112445799999999999
Q ss_pred cCCCC-----CCccchhHHHHHHHHHhhc-------------CCCchh----HHHHHHHHhhhcCC---CCCcc--ccCC
Q 001059 581 QGWPK-----IDEKADMYSLGIVFFELWH-------------PFSTAM----ERQIVLSDLKQKGE---LPPSW--VAKF 633 (1170)
Q Consensus 581 ~~~~~-----~~~ksDIwSlGviL~ELlt-------------Pf~~~~----~~~~~~~~l~~~~~---~p~~~--~~~~ 633 (1170)
.+... ++.++|||||||++|||++ ||.... ........+..... ++..+ ...+
T Consensus 224 ~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (342)
T 1b6c_B 224 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEAL 303 (342)
T ss_dssp TSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHH
T ss_pred cccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHH
Confidence 87422 2368999999999999985 443321 11222222222221 22221 1233
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.+.+||.+||+.||.+|||+.+++++
T Consensus 304 ~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 304 RVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 578899999999999999999999986
No 264
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A*
Probab=100.00 E-value=3e-36 Score=375.09 Aligned_cols=354 Identities=12% Similarity=0.059 Sum_probs=255.7
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCC-ceeeecCCCCHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGG-DLLELSHELRLPF 787 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G-~~laLRPD~T~~i 787 (1170)
+.|++||+|.++.+++.|++.+++.|.++||++|.||+| ++. ++++.+.++||+|.|.+| +.++|||+.|+++
T Consensus 260 ~~G~~~~lP~g~~~~~~l~~~ir~~~~~~Gy~eV~tP~l~~~~l~~~sG~~d~~~~~mf~~~d~~~~~~~~LrP~~~~~~ 339 (645)
T 1nyr_A 260 GAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHH 339 (645)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHTTEEECBCCSEEETHHHHHHTHHHHCTTSSCCCEEETTTEEEEECSSSHHHH
T ss_pred CCceeEECCCHHHHHHHHHHHHHHHHHHcCCEEEECCeeccHHHHhhCCCccccccCcceeEecCCCeEEEeCCCCCHHH
Confidence 789999999999999999999999999999999999999 222 224567899999999999 9999999999999
Q ss_pred HHHHHhCC----CCceeEEEecCeEEcCCCC---C--CCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCcce
Q 001059 788 IRWAISNQ----KSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAESC 856 (1170)
Q Consensus 788 aR~~~~~~----~~P~r~~Y~g~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~~~ 856 (1170)
+|+++++. ..|+|+||+|+|||+|+++ + |.|||+|+|+|+||.+++.+| +|+|.++.++|+.||+++ +
T Consensus 340 ~~~~~~~~~syr~LPlrl~~~g~~fR~E~~~~~~GL~R~ReF~Q~d~~~f~~~~~~~d~~~e~i~~~~~~l~~lGl~~-~ 418 (645)
T 1nyr_A 340 MMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFED-Y 418 (645)
T ss_dssp HHHHHTSCCBGGGCCEEEEEEEEEECCCCTTTCBTTTBCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHTTCCC-E
T ss_pred HHHHHhhhhhccCCCeEEEEeccEEecCCCccccCcceeeeEEEccEEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCe-E
Confidence 99998753 4699999999999999886 2 667899999999999999999 999999999999999975 9
Q ss_pred EEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCCh
Q 001059 857 DIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAA 936 (1170)
Q Consensus 857 ~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~ 936 (1170)
.+.+|++... ..-..+|..+.| +.. ...+..
T Consensus 419 ~~~l~~~~~~-~~e~~~g~~e~~-------------------------~~~--------------~~~l~~--------- 449 (645)
T 1nyr_A 419 SFRLSYRDPE-DKEKYFDDDDMW-------------------------NKA--------------ENMLKE--------- 449 (645)
T ss_dssp EEEEEECCCC-CSSSSSCCHHHH-------------------------HHH--------------HHHHHH---------
T ss_pred EEEEeCCCcc-cchhhcCChHHH-------------------------HHH--------------HHHHHH---------
Confidence 9999985310 000011111000 000 000000
Q ss_pred hhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCccccccccee----cccc
Q 001059 937 DQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLL----AVGG 1012 (1170)
Q Consensus 937 ~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I----~~GG 1012 (1170)
.+...|+. ...+.+. +..|+..+.|++. ...+.. .+.+++ ..++
T Consensus 450 ------------------------~l~~~g~~--~~~~~~~--~~~ygpki~~~~~-d~lg~~---~~~gtiq~D~~l~~ 497 (645)
T 1nyr_A 450 ------------------------AADELGLS--YEEAIGE--AAFYGPKLDVQVK-TAMGKE---ETLSTAQLDFLLPE 497 (645)
T ss_dssp ------------------------HHHHHCCC--CCCEESC--SBTTBCEEEEEEC-CTTSCC---EEEEEEEEESSHHH
T ss_pred ------------------------HHHHcCCC--eEecCCC--CceeCCccceehh-hhhCch---hhcceEEeeccccc
Confidence 11111221 1111111 2223333333221 101100 000000 1134
Q ss_pred ccc-hhhhhcccccccccCCCCCCCCce---EEeccHHHHHhhcc-C-CCCCCCCCCCceEEEEEcCCCccHHHHHHHHH
Q 001059 1013 RYD-YLLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYP-V-DFKPVRNEAGTSVLVCSRGGGGLLVERMELVA 1086 (1170)
Q Consensus 1013 RYD-~L~~~fg~~~~~~~~g~~~~~pAv---GfaiglerL~~~L~-~-~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~ 1086 (1170)
||| .. ++..|. ...|++ |++.|+||++.+|. . ....+...+|.+|+|++.+.+....+|.++++
T Consensus 498 ~~d~~Y---------~~~~g~-~~~P~~ih~~~~GgieR~i~~liE~~~~~~P~~lap~qv~vip~~~~~~~~~a~~i~~ 567 (645)
T 1nyr_A 498 RFDLTY---------IGQDGE-HHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQD 567 (645)
T ss_dssp HTTCCE---------ECTTSC-EECCEEEEEEEEEEHHHHHHHHHHHHTTCCCTTTCSSCEEEEESSHHHHHHHHHHHHH
T ss_pred ccceEE---------ECCCCC-ccCcEEEEeccCCcHHHHHHHHHHHhcCCCCCCCCCceEEEEEcccHHHHHHHHHHHH
Confidence 444 12 112221 235888 88889999997663 2 22222224678999999841457889999999
Q ss_pred HHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1087 ELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1087 ~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
.||+.|++|+++.. +.++++++++|++.|+|++|++|++|+++|+|+||++++++|..++++++++.|.+.+++
T Consensus 568 ~Lr~~Gi~v~~D~~-~~~~g~k~~~a~~~g~p~~iivG~~e~~~~~V~vr~r~~~~~~~v~~~e~~~~l~~~~~~ 641 (645)
T 1nyr_A 568 ELKSQGVRVSIDDR-NEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRL 641 (645)
T ss_dssp HHHTTTCCEEECCS-SCCHHHHHHHHHHHTCSEEEEECHHHHHTTEEEEEETTSSCCCEEEHHHHHHHHHHHHHT
T ss_pred HHHhCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEccchhhCCEEEEEECCCCcEEEEEHHHHHHHHHHHHhh
Confidence 99999999998876 679999999999999999999999999999999999999999999999999999887764
No 265
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.5e-36 Score=347.57 Aligned_cols=269 Identities=18% Similarity=0.209 Sum_probs=191.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC------ChhhHHHHHHHHHHHHhcc---------CCCcee
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK------SLPVNDRILREVATLSRLQ---------HQHVVR 418 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~------~~~~~~~~~~Ev~iL~~l~---------HpnIV~ 418 (1170)
.++|++.+.||+|+||+||+|++ +|+.||||+++.... .....+.+.+|+.+|+.++ |||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 47899999999999999999998 689999999986542 2223467899999999986 999999
Q ss_pred EEEEEeecCccccCCCCCCCCCcccc--cccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHH
Q 001059 419 YYQAWFETGVADFDGDSMWGSGTLAS--STFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELA 495 (1170)
Q Consensus 419 l~~~~~e~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~ 495 (1170)
+++++...+.. ...+.. ..|...... ............+|+|||||+ |++.+.+.. ..+++..+
T Consensus 97 l~~~~~~~~~~---------hp~iv~~~~~~~~~~~~---~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~ 163 (336)
T 2vuw_A 97 LNSVHCVQGSY---------PPLLLKAWDHYNSTKGS---ANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATA 163 (336)
T ss_dssp EEEEEEEESSC---------CHHHHHHHHHHHHHTCC---SSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHH
T ss_pred hcceeEecCCC---------cHHHHHHHHHHhhhccc---cccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHH
Confidence 98876532100 000000 000000000 000000112568999999996 455555543 56899999
Q ss_pred HHHHHHHHHHHHHHH-hCCccccCCCCCceeecCCC--------------------CEEEeecCcchhccccccccCCCC
Q 001059 496 WHLFRQIVEGLAHIH-GQGIIHRDLTPNNIFFDARN--------------------DIKIGDFGLAKFLKLEQLDQDAAF 554 (1170)
Q Consensus 496 ~~i~~qI~~gL~yLH-s~gIiHrDLKp~NILi~~~~--------------------~vKL~DFGlA~~~~~~~~~~~~~~ 554 (1170)
+.++.||+.||+||| ++||+||||||+|||++.++ .+||+|||+|+....
T Consensus 164 ~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~--------- 234 (336)
T 2vuw_A 164 KSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD--------- 234 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET---------
T ss_pred HHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC---------
Confidence 999999999999999 99999999999999999887 899999999986531
Q ss_pred CCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH-HHHhhcCCCchhHH---HHHHHHhhh----cCC-C
Q 001059 555 PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV-FFELWHPFSTAMER---QIVLSDLKQ----KGE-L 625 (1170)
Q Consensus 555 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi-L~ELltPf~~~~~~---~~~~~~l~~----~~~-~ 625 (1170)
...+||+.|||||++.+. .+.++||||+|++ .+++++.+.+.... ......+.. ... .
T Consensus 235 -----------~~~~gt~~y~aPE~~~g~--~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (336)
T 2vuw_A 235 -----------GIVVFCDVSMDEDLFTGD--GDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCN 301 (336)
T ss_dssp -----------TEEECCCCTTCSGGGCCC--SSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCC
T ss_pred -----------CcEEEeecccChhhhcCC--CccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccc
Confidence 234899999999999974 3889999998877 66676533332221 112212111 111 2
Q ss_pred CCccccCCHHHHHHHHHccCCCCCCCCCHHHHH-hccCCC
Q 001059 626 PPSWVAKFSEQESLLRRLMSPSPSDRPSATELL-QDALPP 664 (1170)
Q Consensus 626 p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL-~~~~~~ 664 (1170)
++.+...++++.+||++||+.| |+.++| +||||+
T Consensus 302 ~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 302 TPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp SHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred hhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 2234456778999999999977 999999 999984
No 266
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1
Probab=100.00 E-value=1.9e-34 Score=357.14 Aligned_cols=355 Identities=12% Similarity=0.036 Sum_probs=262.7
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
+.+.|+.||+|.++.+++.|++.+++.|.++||++|.||+| ++ .++.+.+.++||+ .|.+|+.++|||+.|++
T Consensus 258 ~~~~G~~~~lP~g~~l~~~l~~~~r~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~~my~-~d~~~~~~~LrP~~~~~ 336 (642)
T 1qf6_A 258 EEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPG 336 (642)
T ss_dssp TTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGGGCEE-EEETTEEEEECSSSHHH
T ss_pred cCCCCcEEECCcHHHHHHHHHHHHHHHHHHcCCEEEECCcCccHHHHhhcCcccccccccee-eecCCceEEecCCCCHH
Confidence 44899999999999999999999999999999999999999 22 2334567889999 99999999999999999
Q ss_pred HHHHHHhC----CCCceeEEEecCeEEcCCC--C-C--CCCceeEeEEEEeCCCCcccHHH---HHHHHHHHHHHcCCCc
Q 001059 787 FIRWAISN----QKSSFKRYEISSVYRRAIG--H-S--PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHAE 854 (1170)
Q Consensus 787 iaR~~~~~----~~~P~r~~Y~g~VfR~e~~--~-~--~~~ef~Q~GvEiiG~~~~~aDaE---vi~la~~~l~~lgi~~ 854 (1170)
++|+++.+ +..|+|+||+|+|||+|++ + + |.|||+|+|+|+||.+ ..+|+| ++.++.++++.||+.+
T Consensus 337 ~~~~~~~~~~syr~LPlr~~~~g~~fR~E~~g~~~GL~R~ReF~q~d~~~f~~~-~~~~~e~~~~i~~~~~i~~~lGl~~ 415 (642)
T 1qf6_A 337 HVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTE-EQIRDEVNGCIRLVYDMYSTFGFEK 415 (642)
T ss_dssp HHHHHTTSCEEGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECG-GGHHHHHHHHHHHHHHHHGGGTCCC
T ss_pred HHHHHHhhhhhccccCeEEEEeccEEecCCCccccCCceeeeEEEccEEEEcCH-HHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 99998864 3569999999999999986 4 3 5677999999999964 367777 6999999999999974
Q ss_pred ceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcC
Q 001059 855 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 934 (1170)
Q Consensus 855 ~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 934 (1170)
+.+.++++. . ..+|-.+.|...-. ..++++...|++-
T Consensus 416 -~~v~l~~~~--e---~~~g~~e~w~~a~~----------------------~l~~~l~~~g~~~--------------- 452 (642)
T 1qf6_A 416 -IVVKLSTRP--E---KRIGSDEMWDRAEA----------------------DLAVALEENNIPF--------------- 452 (642)
T ss_dssp -CEEEEECCC--S---SCCSCHHHHHHHHH----------------------HHHHHHHTTTCCC---------------
T ss_pred -eEEEEecCc--c---cccCCHHHHHHHHH----------------------HHHHHHHHcCCCc---------------
Confidence 999999853 0 01121111100000 0011111111100
Q ss_pred ChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 935 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
..++. + ...+| .++.+-+....|.+||+|++|.-|.. +...|+||
T Consensus 453 -------------~~~~g------~--~afyg--pk~d~~~~d~~G~~~~~gti~~df~l------------~~r~~~~y 497 (642)
T 1qf6_A 453 -------------EYQLG------E--GAFYG--PKIEFTLYDCLDRAWQCGTVQLDFSL------------PSRLSASY 497 (642)
T ss_dssp -------------EEETT------C--SCTTC--CEEEEEEECTTCCEEEEEEEEEESSH------------HHHTTCCE
T ss_pred -------------EEcCC------C--ccccc--CcccEEEEccCCceEEeeeEEEeccC------------CccCCCEE
Confidence 00000 0 00011 23433333345788888887643321 12345566
Q ss_pred chhhhhcccccccccCCCCCCCCceEE-ec--cHHHHHhhccCC--CCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHH
Q 001059 1015 DYLLHRMWDREYVGYASRTNPPSGVGA-SL--ALETIIQHYPVD--FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1089 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~pAvGf-ai--glerL~~~L~~~--~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR 1089 (1170)
-+. .| +...|++|+ ++ ++||++.+|.++ ...+...+|.+|+|++++ +....+|.++++.||
T Consensus 498 ~~~---~g----------~~~~P~~~hrai~G~ieR~i~~liE~~~~~~P~~laP~qv~vipi~-~~~~~~a~~v~~~L~ 563 (642)
T 1qf6_A 498 VGE---DN----------ERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT-DSQSEYVNELTQKLS 563 (642)
T ss_dssp ECT---TS----------CEECCEEEEEEEEEEHHHHHHHHHHHHTTCCCTTTCSSCEEEEESS-HHHHHHHHHHHHHHH
T ss_pred Eec---CC----------CCcCcEEEEeccCCCHHHHHHHHHHHhcCCCCcccCCceEEEEEeC-HHHHHHHHHHHHHHH
Confidence 321 11 123589988 87 899999886522 222233578899999996 778899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 001059 1090 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1090 ~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~~ 1162 (1170)
+.|++|++++. +.++++++++|+..|+|++|+||++|+++|+|+||++++++|..++++++++.|.+.++..
T Consensus 564 ~~Gi~v~~D~~-~~~~g~kir~a~~~g~p~~ivvG~~E~~~~~V~vr~r~~~~~~~v~~~e~~~~l~~~~~~~ 635 (642)
T 1qf6_A 564 NAGIRVKADLR-NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSR 635 (642)
T ss_dssp TTTCCEEEECC-SSCHHHHHHHHHHTTCSEEEEECTTTGGGCCEEEEESSSCEEEEECHHHHHHHHHHHHHTT
T ss_pred hCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECchhhhcCeEEEEECCCCceEEEEHHHHHHHHHHHHhhh
Confidence 99999998876 6799999999999999999999999999999999999999999999999999999887653
No 267
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.5e-36 Score=370.19 Aligned_cols=263 Identities=25% Similarity=0.311 Sum_probs=199.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...++|++.+.||+|+||+||+|.++.+|+.||||+++.. ........+.+|+.+|+.++||||+++++++....
T Consensus 11 ~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~---- 85 (676)
T 3qa8_A 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQ---- 85 (676)
T ss_dssp ------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTC----
T ss_pred CCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccc----
Confidence 3458899999999999999999999999999999998643 34455678999999999999999999998762210
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qI~~gL~ 507 (1170)
........|+|||||+ ++|.+++.... .+++..++.++.||+.||+
T Consensus 86 ------------------------------~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~ 135 (676)
T 3qa8_A 86 ------------------------------KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135 (676)
T ss_dssp ------------------------------CCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHH
T ss_pred ------------------------------cccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHH
Confidence 0012355689999995 59999998654 5999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCC---EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
|||++||+||||||+|||++.++. +||+|||+++...... ......||+.|+|||++.+ .
T Consensus 136 yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~----------------~~~~~~gt~~Y~APE~l~~-~ 198 (676)
T 3qa8_A 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE----------------LCTEFVGTLQYLAPELLEQ-K 198 (676)
T ss_dssp HHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC----------------CCCCCCSCCTTCSSCSSCC-S
T ss_pred HHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccc----------------ccccccCCcccCChHHhcc-C
Confidence 999999999999999999997765 9999999998653211 1234579999999999987 5
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHH--------------hhhcCCC------CC-ccccCCHHHHHHH
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSD--------------LKQKGEL------PP-SWVAKFSEQESLL 640 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~--------------l~~~~~~------p~-~~~~~~~e~~~LI 640 (1170)
.++.++|||||||++|+|++ ||.+.......... ......+ |. .....++.+.+||
T Consensus 199 ~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI 278 (676)
T 3qa8_A 199 KYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWL 278 (676)
T ss_dssp CCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHH
Confidence 78999999999999999997 77654222111000 0000000 11 1122456889999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.+||..||.+|||+.++++|+||...
T Consensus 279 ~~mL~~DP~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 279 QCMLMWHQRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp HHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred HHHccCCHhhCcCHHHHhcCHHHHHH
Confidence 99999999999999999999998753
No 268
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.4e-36 Score=340.82 Aligned_cols=251 Identities=23% Similarity=0.346 Sum_probs=175.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHh--ccCCCceeEEEEEeecCccccC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
++|++.+.||+|+||.||+|++. |+.||||+++.. ....+.+|.+++.. ++||||+++++++....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~----- 70 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDN----- 70 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-----
T ss_pred ceeeehhhccCCCCeEEEEEEEc--CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCC-----
Confidence 57899999999999999999874 899999998632 23567788888887 79999999999885431
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH- 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH- 510 (1170)
.....+|+|||||++ +|.+++.. ..+++..++.++.|++.||+|||
T Consensus 71 -------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~l~~lH~ 118 (303)
T 3gxj_A 71 -------------------------------GTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHM 118 (303)
T ss_dssp -------------------------------SSSEEEEEEEECCTTCCHHHHHHH-CCBCC-CHHHHC-CHHHHHC-CCC
T ss_pred -------------------------------CccceeEEEEeccCCCCHHHHHhc-cCcchHHHHHHHHHHHHHHHHHHH
Confidence 112478999999975 99999865 46888899999999999999999
Q ss_pred -------hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 511 -------GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 511 -------s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
++||+||||||+|||++.++.+||+|||+++........ .........||+.|+|||++.+.
T Consensus 119 ~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~ 187 (303)
T 3gxj_A 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT-----------IDIAPNHRVGTKRYMAPEVLDDS 187 (303)
T ss_dssp CBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTE-----------ESCC-----CCGGGCCHHHHTTC
T ss_pred HHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcc-----------cccccCCCCcCccccCHhhhcCc
Confidence 999999999999999999999999999999765432111 01112345799999999999874
Q ss_pred CC-----CCccchhHHHHHHHHHhhc-------------CCCchhHH----HHHHHHhhhcC---CCCCccc--cCCHHH
Q 001059 584 PK-----IDEKADMYSLGIVFFELWH-------------PFSTAMER----QIVLSDLKQKG---ELPPSWV--AKFSEQ 636 (1170)
Q Consensus 584 ~~-----~~~ksDIwSlGviL~ELlt-------------Pf~~~~~~----~~~~~~l~~~~---~~p~~~~--~~~~e~ 636 (1170)
.. ++.++|||||||++|||++ ||...... ......+.... .++..+. ..++.+
T Consensus 188 ~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (303)
T 3gxj_A 188 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVM 267 (303)
T ss_dssp SCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHH
T ss_pred ccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHH
Confidence 22 3368999999999999985 33322110 11111111111 1222111 223478
Q ss_pred HHHHHHccCCCCCCCCCHHHHHhc
Q 001059 637 ESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 637 ~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.+||.+||+.||.+|||+.++++.
T Consensus 268 ~~li~~cl~~dP~~Rps~~~i~~~ 291 (303)
T 3gxj_A 268 AKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp HHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHhccCcccCCCHHHHHHH
Confidence 999999999999999999999874
No 269
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-35 Score=352.70 Aligned_cols=266 Identities=15% Similarity=0.136 Sum_probs=193.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccC-CCceeEE---------EEE
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQH-QHVVRYY---------QAW 423 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~H-pnIV~l~---------~~~ 423 (1170)
..|...+.||+|+||+||+|++..+|+.||||+++.... .....+.+.+|+.+++.++| +|...+. ...
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 468889999999999999999999999999999874332 22335678999999999987 3332211 111
Q ss_pred eecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-------cCCCCHHHHH
Q 001059 424 FETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-------YDHFDKELAW 496 (1170)
Q Consensus 424 ~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-------~~~l~e~~~~ 496 (1170)
...+.. .+ ..............++++|+++.++|.+++.. ...+++..++
T Consensus 158 ~~~~~~-----------~~------------~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~ 214 (413)
T 3dzo_A 158 KDPQKK-----------KM------------IRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARL 214 (413)
T ss_dssp ECCC--------------------------------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHH
T ss_pred ccCCCC-----------cc------------ccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHH
Confidence 000000 00 00000000111345789999999999988842 2237788899
Q ss_pred HHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 001059 497 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 497 ~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... ....+| +.|+|
T Consensus 215 ~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~------------------~~~~~g-~~y~a 275 (413)
T 3dzo_A 215 QLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS------------------AVSPIG-RGFAP 275 (413)
T ss_dssp HHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE------------------ECCCCC-TTTCC
T ss_pred HHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCc------------------cccCCC-CceeC
Confidence 99999999999999999999999999999999999999999998864321 234578 99999
Q ss_pred ccccc---------CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 577 PEIEQ---------GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 577 PE~l~---------~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
||++. ....++.++|||||||++|||++ ||............ .......++++.+||.+||
T Consensus 276 PE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l 348 (413)
T 3dzo_A 276 PETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI-------FRSCKNIPQPVRALLEGFL 348 (413)
T ss_dssp HHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGG-------GSSCCCCCHHHHHHHHHHT
T ss_pred chhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHH-------HhhcccCCHHHHHHHHHHc
Confidence 99983 22458889999999999999997 77654432221111 1122355679999999999
Q ss_pred CCCCCCCCCHHHHHhccCCCCchHH
Q 001059 645 SPSPSDRPSATELLQDALPPQMEYE 669 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~~~~~~~ 669 (1170)
+.||.+|||+.++++|+||.+....
T Consensus 349 ~~dP~~Rpt~~~~l~~~~~~~~~~~ 373 (413)
T 3dzo_A 349 RYPKEDRLLPLQAMETPEYEQLRTE 373 (413)
T ss_dssp CSSGGGSCCHHHHTTSHHHHHHHHH
T ss_pred cCChhhCcCHHHHHhCHHHHHHHHH
Confidence 9999999999999999998776533
No 270
>3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A*
Probab=100.00 E-value=5.3e-34 Score=339.43 Aligned_cols=351 Identities=10% Similarity=0.021 Sum_probs=255.4
Q ss_pred CCCCCccccccchhhhhhhhHHhHHHHHH-HHcCCccccccce----ec--cCCCcccccceEEEecc--CCceeeecCC
Q 001059 712 NRDNTSSIQYSDLDTELRDYVVQVTKEMF-RQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTH--GGDLLELSHE 782 (1170)
Q Consensus 712 n~~p~G~~D~lp~e~~~~~~I~~~i~~~f-~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~--~G~~laLRPD 782 (1170)
.....|+.||+|.++.+++.|++.+++.+ .++||++|.||+| ++ .++.+.+.++||+|.|. +|+.++|||+
T Consensus 50 ~~~~~G~~~~lP~g~~l~~~l~~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~emy~~~d~~~~~~~l~LrPt 129 (460)
T 3uh0_A 50 DPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMFKVETTDEEKEEYGLKPM 129 (460)
T ss_dssp CTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTSCCEECCCCSEEEHHHHHHHTCTTTSGGGSCEECC------CEEECSC
T ss_pred ccCCCCcEEECccHHHHHHHHHHHHHHHHHHhcCCEEEECCeeccHHHHHhcCCccccccceEEEecCCCCCceEEEccc
Confidence 34589999999999999999999999999 9999999999999 22 23456778999999997 4899999999
Q ss_pred CCHHHHHHHHhC----CCCceeEEEecCeEEcCCCC---C--CCCceeEeEEEEeCCCCcccHHH---HHHHHHHHH-HH
Q 001059 783 LRLPFIRWAISN----QKSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIV-TR 849 (1170)
Q Consensus 783 ~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aDaE---vi~la~~~l-~~ 849 (1170)
.|++++++++.. +..|+|+||+|+|||+|+++ + |.|||+|.|+++||.++ .+|+| +|.++.+++ +.
T Consensus 130 ~~~~~~~~~~~~~~s~r~LPlrl~~~g~~fR~E~~~~~~GL~R~ReF~q~d~~~f~~~e-~~~~e~~~~i~~~~~~~~~~ 208 (460)
T 3uh0_A 130 NCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPS-QVKSEIFNSLKLIDIVYNKI 208 (460)
T ss_dssp SHHHHHHHHTTSCCBGGGCSEEEEECCEEECCCCTTTCBTTTBCSEEEEEEEEEEECGG-GHHHHHHHHHHHHHHHHTTT
T ss_pred CcHHHHHHHHhccccccccCeEEEEecCeeeCCCCCCCCCceeeeeEEEeeEEEEcCHH-HHHHHHHHHHHHHHHHHHHH
Confidence 999999998763 34599999999999999874 3 56679999999998764 56665 999999999 99
Q ss_pred cCCC--------cceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHH
Q 001059 850 FFHA--------ESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAV 921 (1170)
Q Consensus 850 lgi~--------~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 921 (1170)
||+. + +.+.++++. -+.+|-.+.|.++-
T Consensus 209 lGl~~~~~~~~~~-~~~~l~t~p-----e~~~G~~~~w~~ae-------------------------------------- 244 (460)
T 3uh0_A 209 FPFVKGGSGAESN-YFINFSTRP-----DHFIGDLKVWNHAE-------------------------------------- 244 (460)
T ss_dssp SCCC-----CCSS-CEEEEECCC-----SSCCSCHHHHHHHH--------------------------------------
T ss_pred cCCCCcccccccc-eEEEEccCC-----cccCCCHHHHHHHH--------------------------------------
Confidence 9997 5 888887742 01122111110000
Q ss_pred HHHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEe-ccCCCcc
Q 001059 922 VNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFS-VKEKYPA 1000 (1170)
Q Consensus 922 ~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~-~~~~~~~ 1000 (1170)
..|.. +|+..|. .+.++++ .-.|| |.-.++.. ...+..
T Consensus 245 -~~L~~---------------------------------~l~~~g~--~~~~~~g---~gafy-gpkid~~~~d~~gr~- 283 (460)
T 3uh0_A 245 -QVLKE---------------------------------ILEESGK--PWKLNPG---DGAFY-GPKLDIMVTDHLRKT- 283 (460)
T ss_dssp -HHHHH---------------------------------HHHHHTC--CEEEETT---CSCSS-CCEEEEEEECTTSCE-
T ss_pred -HHHHH---------------------------------HHHHhCC--CeeECCC---ccccc-cceEEEEEEccCCCe-
Confidence 00000 1122232 3455555 33466 43333322 111210
Q ss_pred ccccccee----ccccccchhhhhcccccccccCCCCCCCCce----EEeccHHHHHhhccC--CCCCCCCCCCceEEEE
Q 001059 1001 TLVEGTLL----AVGGRYDYLLHRMWDREYVGYASRTNPPSGV----GASLALETIIQHYPV--DFKPVRNEAGTSVLVC 1070 (1170)
Q Consensus 1001 ~~~~~~~I----~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAv----GfaiglerL~~~L~~--~~~~~~~~~~~~vlv~ 1070 (1170)
.+.++| ..+.|||-. | ....| +...|++ +|+ ++||++.+|.+ +...+...+|.+|+|+
T Consensus 284 --~q~~Tiqld~~~~~rf~l~---y-----~~~~g-~~~~P~~ih~~~~G-g~eRli~~Lie~~~g~~P~~laP~qv~Vi 351 (460)
T 3uh0_A 284 --HQVATIQLDFQLPERFDLK---F-----KDQDN-SYKRPIMIHRATFG-SIERFMALLIDSNEGRWPFWLNPYQAVII 351 (460)
T ss_dssp --EEEEEEEEESHHHHHTTCC---E-----ECTTS-CEECCEEEEEEEEE-EHHHHHHHHHHHHTTCCCGGGCSCCEEEE
T ss_pred --eeecccccccccccccceE---E-----ECCCC-CccCcEEEecCcch-HHHHHHHHHHHHcCCCCCCCCCCceEEEE
Confidence 011122 234555533 1 11122 2346888 477 89999988753 2333334678999999
Q ss_pred EcCCCc---cHHHHHHHHHHHHHc--------------CCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeE
Q 001059 1071 SRGGGG---LLVERMELVAELWEE--------------NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLV 1133 (1170)
Q Consensus 1071 ~~~~~~---~~~~a~~ia~~LR~~--------------Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v 1133 (1170)
+++ +. ...+|.++++.||+. |++|++++. +.++++++++|++.|+|++|+||++|+++|+|
T Consensus 352 pi~-~~~~~~~~~a~~l~~~Lr~~~~~~~~~~~~~~~~Gi~v~~D~~-~~~lg~k~r~Ad~~g~p~~ivvG~~E~~~g~V 429 (460)
T 3uh0_A 352 PVN-TKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHFNVDLDIR-NEPVGYRIKSAILKNYSYLIIVGDEEVQLQKY 429 (460)
T ss_dssp ESS-TTCHHHHHHHHHHHHHHHCCCCTTSSCCCCTTCCCCCEEECCC-SSCHHHHHHHHHHHTCSEEEEECHHHHHHTCE
T ss_pred Eec-CCcHHHHHHHHHHHHHHHcCcccccccccccCCCCEEEEEECC-CCCHHHHHHHHHHcCCCEEEEEcchhhhCCeE
Confidence 996 55 688999999999998 999998876 67999999999999999999999999999999
Q ss_pred EEEEcCCCc-ccccchHHHHHHHHHHHHhh
Q 001059 1134 KVRHLDVKK-EKEVQRESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1134 ~vk~l~~~e-q~~v~~~~l~~~l~~~l~~~ 1162 (1170)
+||++++++ |..++++++++.+.++++++
T Consensus 430 tvr~r~~~e~q~~v~~~el~~~l~~~~~~~ 459 (460)
T 3uh0_A 430 NIRERDNRKSFEKLTMSQIWEKFIELEKNY 459 (460)
T ss_dssp EEEEGGGTTSCEEECHHHHHHHHHHHHHTT
T ss_pred EEEECCCCceeEEeeHHHHHHHHHHHHHhc
Confidence 999999999 99999999999999988753
No 271
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A*
Probab=100.00 E-value=5.1e-34 Score=343.34 Aligned_cols=332 Identities=10% Similarity=0.068 Sum_probs=266.1
Q ss_pred cccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC---CcccccceEEEeccC----Ccee
Q 001059 709 LRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD---CPQFKRNTVKLLTHG----GDLL 777 (1170)
Q Consensus 709 ~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~---~~~~~~~my~f~D~~----G~~l 777 (1170)
++....+.|+.||+|.++.+++.|++.+++.|++ ||++|.||+| ++.+. .+.+.++||+|.|.+ |+.+
T Consensus 54 id~~~~~~G~~~~~P~g~~l~~~i~~~~~~~~~~-G~~ei~tP~l~~~~l~~~~sG~~~~f~~emy~~~d~g~~~~~~~l 132 (501)
T 1nj1_A 54 IDQRYPVKGMHVWMPHGFMIRKNTLKILRRILDR-DHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQRKL 132 (501)
T ss_dssp EECCCSSTTCCEECHHHHHHHHHHHHHHHHHHTT-TCEECCCCSEEEHHHHTTSHHHHHHTTTTCCEEEEETTEEEEEEE
T ss_pred ccccCCCCceEEECccHHHHHHHHHHHHHHHHHc-CCEEEecCcEecHHHHhcccCCcccCCcceEEEecCCCcccCCee
Confidence 3333456999999999999999999999999999 9999999999 34332 345789999999986 7899
Q ss_pred eecCCCCHHHHHHHHhC----CCCceeEEEecCeEEcCCC-CC---CCCcee-EeEEEEeCCCCcccHHHH---HHHHHH
Q 001059 778 ELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRAIG-HS---PPNRYL-QGDFDIIGGASALTEAEV---LKVTMD 845 (1170)
Q Consensus 778 aLRPD~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e~~-~~---~~~ef~-Q~GvEiiG~~~~~aDaEv---i~la~~ 845 (1170)
+|||+.|++++|+++.+ ...|+|+||+|+|||+|++ +. |.|||+ |++++++|.....+|+|+ +.++.+
T Consensus 133 ~LrPt~e~~i~~~~~~~~~s~~~LPlr~~q~g~~fR~E~~~~rGl~R~REF~~q~e~~~~~~~~e~a~~e~~~~l~~~~~ 212 (501)
T 1nj1_A 133 ALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIYKE 212 (501)
T ss_dssp EECSSSHHHHHHHHHHHCCBTTTCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCHHHHHHHHhhhcccccCCEEEEeecCEeeCCCCCCCCCceeEEEeeeeeEEEEECCHHHHHHHHHHHHHHHHH
Confidence 99999999999998873 3569999999999999877 54 456799 999999999888888885 999999
Q ss_pred HHHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHH
Q 001059 846 IVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRL 925 (1170)
Q Consensus 846 ~l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 925 (1170)
+++.||+. +.+.++... ++ +
T Consensus 213 i~~~Lgl~--~~~~~~~~~--------------------------e~-----------------------~--------- 232 (501)
T 1nj1_A 213 FFNSLGIP--YLITRRPPW--------------------------DK-----------------------F--------- 232 (501)
T ss_dssp HHHHHTCC--CEEEECCTT--------------------------TS-----------------------C---------
T ss_pred HHHHCCCe--EEEEeCCch--------------------------hh-----------------------c---------
Confidence 99999996 887765310 00 0
Q ss_pred HHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCccccccc
Q 001059 926 QTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEG 1005 (1170)
Q Consensus 926 ~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~ 1005 (1170)
.+. ...+.++..+..|..|+.|++|.+- . .
T Consensus 233 -------~~a--------------------------------~~~~die~~l~~g~~~ei~t~~~lg---~--------~ 262 (501)
T 1nj1_A 233 -------PGS--------------------------------EYTVAFDTLMPDGKTLQIGTVHNLG---Q--------T 262 (501)
T ss_dssp -------TTC--------------------------------SEEEEEEEECTTSCEEEEEEEEEEE---T--------H
T ss_pred -------CCc--------------------------------ccceEEEEEcCCCCEEEEEEEEecc---c--------c
Confidence 000 0124556666668889999998662 1 2
Q ss_pred ceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC------CCCCCCCCCCceEEEEEc-C-CC--
Q 001059 1006 TLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSR-G-GG-- 1075 (1170)
Q Consensus 1006 ~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~------~~~~~~~~~~~~vlv~~~-~-~~-- 1075 (1170)
.+.+.|+||++- . |.. ..++++||+++ +|++.+|.+ +...+...+|.+|+|+++ + .+
T Consensus 263 ~a~~~~~ry~~~--~-g~~---------~~~h~~g~Gig-eRli~aliE~~~d~~Gl~~P~~laP~qV~Iipi~~~~~~~ 329 (501)
T 1nj1_A 263 FARTFEIKFETP--E-GDH---------EYVHQTCYGLS-DRVIASVIAIHGDESGLCLPPDVAAHQVVIVPIIFKKAAE 329 (501)
T ss_dssp HHHHHTCEEECT--T-SCE---------EECEEEEEEEC-THHHHHHHHHTCCSSSEECCTTTSSCSEEEEECCSSSSHH
T ss_pred chhhcCeEEECC--C-CCE---------EeeeeccccHH-HHHHHHHHHHcCcccCccCCccccCceEEEEEeccCCchH
Confidence 367889999863 1 221 23467899999 999888742 112223347889999998 4 32
Q ss_pred ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHH
Q 001059 1076 GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1155 (1170)
Q Consensus 1076 ~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l 1155 (1170)
....+|.++++.||+.|++|++++. +.++++++++|++.|+|++|+||++|+++|+|+||++++++|..|+++++++.|
T Consensus 330 ~~~~~a~~l~~~Lr~~Gi~v~~D~~-~~s~g~k~~~a~~~G~p~~iiiG~~e~~~~~V~vr~r~t~eq~~v~~~el~~~l 408 (501)
T 1nj1_A 330 EVMEACRELRSRLEAAGFRVHLDDR-DIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTADLQGIEETL 408 (501)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEECCC-SSCHHHHHHHHHHEECSEEEEECHHHHTTTEEEEEESSSCCEEEEETTTHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEECcchhhCCEEEEEECCCCceEEEeHHHHHHHH
Confidence 5788999999999999999998876 679999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccC
Q 001059 1156 LDAIASQFRN 1165 (1170)
Q Consensus 1156 ~~~l~~~~~~ 1165 (1170)
.+.++..+++
T Consensus 409 ~~~l~~~~~~ 418 (501)
T 1nj1_A 409 RELMKDILEN 418 (501)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8887765543
No 272
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.8e-34 Score=363.60 Aligned_cols=244 Identities=23% Similarity=0.325 Sum_probs=193.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~-tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++.+.||+|+||+||+|.+.. +|+.||||++... ........+.+|+.+|+.++||||++++++|.+.+.
T Consensus 77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~-- 153 (681)
T 2pzi_A 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR-- 153 (681)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT--
T ss_pred EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC--
Confidence 445899999999999999999999976 7999999988643 334455678999999999999999999998855310
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
.....+|+|||||+| +|.+++.. .+++.+++.++.||+.||.||
T Consensus 154 ---------------------------------~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~l 198 (681)
T 2pzi_A 154 ---------------------------------HGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYL 198 (681)
T ss_dssp ---------------------------------TSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHH
Confidence 113457999999975 88887654 799999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.+ .+||+|||+++.... ....+||+.|+|||++.+. ++.+
T Consensus 199 H~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~-------------------~~~~~gt~~y~aPE~~~~~--~~~~ 256 (681)
T 2pzi_A 199 HSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS-------------------FGYLYGTPGFQAPEIVRTG--PTVA 256 (681)
T ss_dssp HHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTC-------------------CSCCCCCTTTSCTTHHHHC--SCHH
T ss_pred HHCCCeecccChHHeEEeCC-cEEEEecccchhccc-------------------CCccCCCccccCHHHHcCC--CCCc
Confidence 99999999999999999875 999999999986421 1345799999999999873 5899
Q ss_pred chhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCC--CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 590 ADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 590 sDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p--~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+|||||||++|+|++++.+.... . ...++ ......++.+.+||.+||+.||.+||+..+.+.|+|.
T Consensus 257 sDi~slG~~l~~l~~g~~~~~~~------~--~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 257 TDIYTVGRTLAALTLDLPTRNGR------Y--VDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp HHHHHHHHHHHHHHSCCCEETTE------E--CSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred eehhhhHHHHHHHHhCCCCCccc------c--cccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 99999999999999855433210 0 01111 1222345688999999999999999998888888654
No 273
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.5e-33 Score=317.61 Aligned_cols=222 Identities=14% Similarity=0.076 Sum_probs=177.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++.+.||+|+||.||+|++..+|+.||||++...... ......+.+|+.+++.++||||+++++++..
T Consensus 29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~------ 102 (286)
T 3uqc_A 29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT------ 102 (286)
T ss_dssp TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE------
T ss_pred ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE------
Confidence 447799999999999999999999999999999999765433 3445789999999999999999999998743
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++.. .....++..++.||+.||+|||
T Consensus 103 ----------------------------------~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~i~~ql~~aL~~lH 146 (286)
T 3uqc_A 103 ----------------------------------RAGGLVVAEWIRGGSLQEVADT--SPSPVGAIRAMQSLAAAADAAH 146 (286)
T ss_dssp ----------------------------------TTEEEEEEECCCEEEHHHHHTT--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCcEEEEEEecCCCCHHHHHhc--CCChHHHHHHHHHHHHHHHHHH
Confidence 356899999997 599999854 2466778999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+++| |++| ++.++
T Consensus 147 ~~givH~Dikp~NIll~~~g~~kl~~~~-----------------------------------~~~~--------~~~~~ 183 (286)
T 3uqc_A 147 RAGVALSIDHPSRVRVSIDGDVVLAYPA-----------------------------------TMPD--------ANPQD 183 (286)
T ss_dssp HTTCCCCCCSGGGEEEETTSCEEECSCC-----------------------------------CCTT--------CCHHH
T ss_pred HCCCccCCCCcccEEEcCCCCEEEEecc-----------------------------------ccCC--------CCchh
Confidence 9999999999999999999999998443 3332 68899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhh-hcCCCC---CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGELP---PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~-~~~~~p---~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++|||++ ||.............. .....+ ......++++.+||.+||+.||.+| |+.++++.
T Consensus 184 Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~ 259 (286)
T 3uqc_A 184 DIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL 259 (286)
T ss_dssp HHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence 99999999999997 8865433211000000 011111 1224567899999999999999999 99999874
No 274
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A
Probab=99.97 E-value=5.4e-31 Score=326.06 Aligned_cols=391 Identities=12% Similarity=0.033 Sum_probs=229.0
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHH-HcCCccccccce----ec--cCCCcccc---------cceEEEecc-----
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFR-QHCAKHLEIEPM----YL--LGDCPQFK---------RNTVKLLTH----- 772 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~-~~Gy~~I~tP~~----~~--~~~~~~~~---------~~my~f~D~----- 772 (1170)
.+.|+.||+|.++++++.|++.|++.|. ..||.+|.||+| ++ +++.+.+. ++||+| |+
T Consensus 89 g~~G~~d~lP~G~~l~~~Ie~~~r~~~~~~~g~~EV~tP~l~~~~lwk~SGH~~~f~d~m~~~~~~~e~yr~-D~l~e~~ 167 (693)
T 2zt5_A 89 GVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRA-DHLLKAH 167 (693)
T ss_dssp CCTTCEEECHHHHHHHHHHHHHHHHHTHHHHTCEECCCCSEEEHHHHHHHTHHHHCEEEEEEBSSSCCEEEH-HHHHHHH
T ss_pred CCCCeEEECCChHHHHHHHHHHHHHHHHHhcCcEEEEeCCcccHHHHhhcCCcccccccceeeccCCceeec-cHhHHHH
Confidence 3589999999999999999999999998 569999999999 22 22333322 466665 33
Q ss_pred --------------------------------------------------------------------CCceeeecCCCC
Q 001059 773 --------------------------------------------------------------------GGDLLELSHELR 784 (1170)
Q Consensus 773 --------------------------------------------------------------------~G~~laLRPD~T 784 (1170)
+|+.+.||||.|
T Consensus 168 ~~~~~~~~~~~~~~~~e~~~~~~~l~~~~~eel~~li~~~~~~~P~~g~~~~~~~~fnlmf~t~igp~~~~~~~LRPEta 247 (693)
T 2zt5_A 168 LQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPETA 247 (693)
T ss_dssp HHHHHHSTTCCHHHHHHHHHHHTTTTTCCHHHHHHHHHHTTCBCSSSCCBBCCCEEEECCCEEECSSSSSSEEEECSCSH
T ss_pred HHHhhccccccHHHHHHHHHHHhhccCCCHHHHHHHHHHcCCCCCCCCCCCCCcchhheeeeccccCCCCcceeeccccc
Confidence 468899999999
Q ss_pred HHH----HHHHHh-CCCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcc--------cHHH---------
Q 001059 785 LPF----IRWAIS-NQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASAL--------TEAE--------- 838 (1170)
Q Consensus 785 ~~i----aR~~~~-~~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~--------aDaE--------- 838 (1170)
.++ +|.+.. ++..|+|+||+|++||+| +|+. |.|||+|.++|+||.++.. +|+|
T Consensus 248 qg~f~~f~r~~~~~~~~LP~~~aqiG~~fRnEisPr~GLlR~REF~q~d~e~F~~p~~~~~~~y~~v~da~~~~~~~~~~ 327 (693)
T 2zt5_A 248 QGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQ 327 (693)
T ss_dssp HHHHTTHHHHHHHTTTCSCEEEEEEEEEECCCSSCCSGGGSCSEEEEEEEEEEECTTCCCCTTGGGTTTCEEEEECHHHH
T ss_pred hHHHHHHHHHHHHhCcCCCEEEEeecceecCCCCCCCCCccceeeEEccceEEeCcchhcchhHHHHHHHHHhhhhhhhh
Confidence 998 998887 467799999999999998 7775 5567999999999987764 3433
Q ss_pred ---------------------------HHHHHHHHHHHcCCCcceEEEeCcH--HHHHHH---------HHHhCCCHH--
Q 001059 839 ---------------------------VLKVTMDIVTRFFHAESCDIHLNHG--DLLEAI---------WSWAGIKAE-- 878 (1170)
Q Consensus 839 ---------------------------vi~la~~~l~~lgi~~~~~i~lg~~--~il~~~---------l~~lgl~~~-- 878 (1170)
+|.++.+++..+|+.. ..+.+... .-...+ +...|-.+.
T Consensus 328 ~~~~~~~~~~~~ea~~~g~i~~e~~~~~i~~~~~f~~~lGi~~-~~~~~~~~~~~e~a~ya~~~~d~e~~~~~g~~e~~~ 406 (693)
T 2zt5_A 328 VSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISP-DKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVG 406 (693)
T ss_dssp HTTCCCEEEEHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTCCG-GGEEEEECCGGGSCTTCSSEEEEEEEETTEEEEEEE
T ss_pred ccccccccchhhhhhhhcccchHHHHHHHHHHHHHHHHcCcCc-cEEEEeccCchhhccchhhhhhehhhccCChHHHHH
Confidence 8899999999999974 33443211 000000 000000000
Q ss_pred ----HHHHHHHHHHH-hcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChhH
Q 001059 879 ----HREKVAELLAM-MGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPT 953 (1170)
Q Consensus 879 ----~~~~l~~~l~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~ 953 (1170)
..-.|...... ...+. .. .+.......+... +.......... +..++..+.+.|. ...
T Consensus 407 ~a~r~~~dL~~~~~~s~~~l~--~~-~~~~~p~~~~~~~----~~~~~~~~g~~----i~~~Ap~i~d~L~------~~~ 469 (693)
T 2zt5_A 407 CADRSCYDLSCHARATKVPLV--AE-KPLKEPKTVNVVQ----FEPSKGAIGKA----YKKDAKLVMEYLA------ICD 469 (693)
T ss_dssp EECCCSHHHHHHHHHHTCCCC--EE-EC----------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhccchh--hh-cccCcccceeeee----ecCChHHHHHH----HHhcccHHHHHhh------hhh
Confidence 00011111111 00000 00 0000000000000 00000000000 0000011111111 111
Q ss_pred HHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcccccccccCC
Q 001059 954 RKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYAS 1031 (1170)
Q Consensus 954 ~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g 1031 (1170)
...++++ .|...|. -.+.+| |++|++.....+. .... .-..||||
T Consensus 470 ~~~~~~l~~~L~~~g~-i~i~vd-----------Gt~Fei~~~~~~~--~~y~--~~~~Ggry----------------- 516 (693)
T 2zt5_A 470 ECYITEMEMLLNEKGE-FTIETE-----------GKTFQLTKDMINV--KRFQ--KTLYVEEV----------------- 516 (693)
T ss_dssp ----------------------------------------------------------CCEEE-----------------
T ss_pred HHHHHHHHHHHHhcCC-EEEEEC-----------CEEEEecccccce--eeEE--eccCCcEe-----------------
Confidence 2233333 4455551 123334 6888885321000 0000 01144555
Q ss_pred CCCCCCce-EEeccHHHHHhhcc-C------------CCCCCCCCCCceEEEEEcCCC-ccHHHHHHHHHHHHHcCCeEE
Q 001059 1032 RTNPPSGV-GASLALETIIQHYP-V------------DFKPVRNEAGTSVLVCSRGGG-GLLVERMELVAELWEENIKAQ 1096 (1170)
Q Consensus 1032 ~~~~~pAv-GfaiglerL~~~L~-~------------~~~~~~~~~~~~vlv~~~~~~-~~~~~a~~ia~~LR~~Gi~v~ 1096 (1170)
+|+| |+|+|++||+.+|. . +...+...+|.+|+|++.+.+ .....|.++++.||+.|++|+
T Consensus 517 ----~P~Vi~~s~GigRli~aLie~~~~~~~~~~~r~g~~~P~~lAP~qV~Vipl~~~~~~~~~A~~l~~~Lr~~Gi~v~ 592 (693)
T 2zt5_A 517 ----VPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHK 592 (693)
T ss_dssp ----CCEEEEEEEEHHHHHHHHHHHHEEECSSTTCCEEECCCTTTSSCSEEEEESCCSTTTHHHHHHHHHHHHHTTCCEE
T ss_pred ----cCcceeCeehHHHHHHHHHHHhccccccccccccccCCCCCCCCeEEEEEecCcHHHHHHHHHHHHHHHHCCCEEE
Confidence 3888 99999999998873 2 112222346789999999632 378999999999999999999
Q ss_pred EeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcc--cCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1097 FVPVPDPSLTEQYEYASEHDIKCLVILTDTGA--QKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1097 ~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~--~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+++. ++++++++++|++.|+||+|+||++|+ ++|+|+||+|++++|..|+++++++.|.+.++.
T Consensus 593 ~D~~-~~sigkk~k~Ad~~G~p~~IiIG~~El~~~~g~Vtvr~r~t~eq~~v~l~el~~~l~~~l~~ 658 (693)
T 2zt5_A 593 VDDS-SGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANG 658 (693)
T ss_dssp ECCC-CSCHHHHHHHHHHTTCCEEEEECHHHHTSSSCEEEEEETTTCCEEEEETTTHHHHHHHHHTT
T ss_pred EECC-CCCHHHHHHHHHHcCCCEEEEEcchhhhccCCEEEEEECCCCceEEEeHHHHHHHHHHHHhC
Confidence 8775 679999999999999999999999999 999999999999999999999999999887653
No 275
>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A*
Probab=99.96 E-value=2.4e-29 Score=303.01 Aligned_cols=345 Identities=13% Similarity=0.056 Sum_probs=238.3
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHH--HcCCccccccce----ec--cCCCcccccceEE-----------------
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFR--QHCAKHLEIEPM----YL--LGDCPQFKRNTVK----------------- 768 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~--~~Gy~~I~tP~~----~~--~~~~~~~~~~my~----------------- 768 (1170)
.+.|+.||+|.++.+++.|++.+++.|. ++||.+|.||+| ++ +++.+.+.+.||+
T Consensus 27 ~~~G~~d~~P~G~~l~~~l~~~~r~~~~~~~~g~~ev~tP~l~~~~l~~~SGh~~~f~d~m~~~~~~~~~~r~d~l~~~~ 106 (505)
T 1ati_A 27 GLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQ 106 (505)
T ss_dssp CCTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHTSHHHHCEEEEEEC----------------
T ss_pred CCCCcceeCccHHHHHHHHHHHHHHHHHHhhCCcEEEEccccCCHHHHHhcCChhhcCccceeccccccccchhhhhhhh
Confidence 4589999999999999999999999999 999999999999 11 2223333334443
Q ss_pred --------------------E------e-----------------ccC-------------------------Cceeeec
Q 001059 769 --------------------L------L-----------------THG-------------------------GDLLELS 780 (1170)
Q Consensus 769 --------------------f------~-----------------D~~-------------------------G~~laLR 780 (1170)
| . +.+ ++.+.||
T Consensus 107 ~~~~~~~~~~~~~~~~e~~~~~~~~~i~~p~~~~~~m~~~~~~cp~~~~~~~~~~~~~fnlmf~t~~gpt~ee~~~~~LR 186 (505)
T 1ati_A 107 PEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFQDLRGPRGGRGLLAYLR 186 (505)
T ss_dssp ----------------------------------------------------CCCCEEEECBEEEECSSCCCGGGEEEEC
T ss_pred hhhhccccccccccHHHHHHHHHhhccccccccccccccccccCCccCccccccccchhhhhhhcccCCccccccceeec
Confidence 3 2 111 4678999
Q ss_pred CCCCHHH----HHHHHhC-CCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCccc--HHHHHHHHHHHHHH
Q 001059 781 HELRLPF----IRWAISN-QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALT--EAEVLKVTMDIVTR 849 (1170)
Q Consensus 781 PD~T~~i----aR~~~~~-~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~a--DaEvi~la~~~l~~ 849 (1170)
|+.|.++ +|.+.++ +..|+|+||+|++||+| +|+. |.|||+|.++++||.++... +++++.++.++++.
T Consensus 187 PE~t~~i~~~~~~~~~sy~r~LP~rl~qig~~FR~E~~pr~GL~R~REF~q~d~~~f~~~e~~~~~~~~~i~~~~~i~~~ 266 (505)
T 1ati_A 187 PETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEYWHRYWVEERLKWWQE 266 (505)
T ss_dssp SSSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCSSCCTGGGSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHhcCCCCCEEEEEeeceeeCCCCCCCCCCcccceEEeeEEEEECHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 8888887 78899999999999998 7774 55679999999999888755 88999999999999
Q ss_pred cCCCcceEEEeCcHHHHHHHHHHhC-CCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHH
Q 001059 850 FFHAESCDIHLNHGDLLEAIWSWAG-IKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTV 928 (1170)
Q Consensus 850 lgi~~~~~i~lg~~~il~~~l~~lg-l~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l 928 (1170)
||+.. ..+.+.... . +.+. ...+... +..... .+. . + + .++
T Consensus 267 LGl~~-~~v~~~~~~--~---~~~~~~~~~~~d-----~E~~~p---~~~--~--------e-~--~g~----------- 308 (505)
T 1ati_A 267 MGLSR-ENLVPYQQP--P---ESSAHYAKATVD-----ILYRFP---HGS--L--------E-L--EGI----------- 308 (505)
T ss_dssp TTCCG-GGEEEEECC--T---TTSCTTCSEEEE-----EEEEET---TEE--E--------E-E--EEE-----------
T ss_pred cCCCe-EEEEECCCC--h---HhhhcccHHHHh-----HHhhcC---CCC--c--------c-c--hhh-----------
Confidence 99974 555544310 0 0000 0000000 000000 000 0 0 0 000
Q ss_pred HHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCccccccccee
Q 001059 929 GLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLL 1008 (1170)
Q Consensus 929 ~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I 1008 (1170)
..+++ ..+..- .. ..+.. .++.+. ..+-|+++.|+++..
T Consensus 309 --~~~~d--~~L~~~---~~---------------~~~~~-~~~~~~----~~n~~~~~~~~y~d~-------------- 347 (505)
T 1ati_A 309 --AQRTD--FDLGSH---TK---------------DQEAL-GITARV----LRNEHSTQRLAYRDP-------------- 347 (505)
T ss_dssp --EECTT--HHHHHH---CS---------------STTTT-TCCSCC----CCCSCCCSCCCEECS--------------
T ss_pred --hcccc--eecchh---hc---------------ccccc-ceeeee----cccccceeEEEEEcC--------------
Confidence 00000 000000 00 00000 011111 123378888877532
Q ss_pred ccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCC---------C------CCCCCCCCceEEEEEcC
Q 001059 1009 AVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD---------F------KPVRNEAGTSVLVCSRG 1073 (1170)
Q Consensus 1009 ~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~---------~------~~~~~~~~~~vlv~~~~ 1073 (1170)
.+|+||- .+++|||+|+||++.+|.+. . ..+...+|.+|+|++.+
T Consensus 348 ~g~~~y~--------------------p~vig~s~GieRli~alle~~~~~~~~~~gd~~~gl~~p~~laP~~v~Vip~~ 407 (505)
T 1ati_A 348 ETGKWFV--------------------PYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLV 407 (505)
T ss_dssp SSCCEEC--------------------CEEEEEEEEHHHHHHHHHHHHEEEEECTTSCEEEEECCCGGGCSCSEEEEESC
T ss_pred CCCeeec--------------------ceEEEEeeEHHHHHHHHHHHHhhhcccccccccccccCCcccCCceEEEEEcC
Confidence 1566772 13999999999998766521 1 12223467899999986
Q ss_pred CC---ccHHHHHHHHHHHHHcC-CeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCccc---------CCeEEEEEcCC
Q 001059 1074 GG---GLLVERMELVAELWEEN-IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQ---------KGLVKVRHLDV 1140 (1170)
Q Consensus 1074 ~~---~~~~~a~~ia~~LR~~G-i~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~---------~~~v~vk~l~~ 1140 (1170)
+ .....|.++++.||+.| ++|+++.. +++++++++|++.|+|++|+||++|++ +|+|+||++++
T Consensus 408 -~~~~~~~~~a~~l~~~Lr~~G~i~v~~D~~--~sig~k~~~ad~~g~p~~iivG~~el~~~~~~~~~~~g~V~vr~r~t 484 (505)
T 1ati_A 408 -KNRPEITEYAKRLKARLLALGLGRVLYEDT--GNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDT 484 (505)
T ss_dssp -SSCHHHHHHHHHHHHHHHTTCSSCEEECCC--SCHHHHHHHHHHTTCSEEEEECHHHHTCCTTSCCTTTTEEEEEETTT
T ss_pred -CccHHHHHHHHHHHHHHhccCCEEEEECCC--CCHHHHHHHHHHCCCCEEEEEChHHhhhccccccccCCEEEEEECCC
Confidence 4 57889999999999999 99997654 689999999999999999999999999 99999999999
Q ss_pred CcccccchHHHHHHHHHHHH
Q 001059 1141 KKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1141 ~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
++|..|++++++++|.+.++
T Consensus 485 ~~q~~v~~~el~~~l~~~l~ 504 (505)
T 1ati_A 485 MEQIRLHVDELEGFLRERLR 504 (505)
T ss_dssp CCEEEEEHHHHHHHHHHHHC
T ss_pred CceEEEEHHHHHHHHHHHhc
Confidence 99999999999999987653
No 276
>4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens}
Probab=99.96 E-value=4.6e-28 Score=290.04 Aligned_cols=328 Identities=8% Similarity=-0.033 Sum_probs=239.8
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc---CCCcccccceEEEeccCCc----eeeecC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHGGD----LLELSH 781 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~G~----~laLRP 781 (1170)
...+|+.+++|.++.+++.|++.+++.+.++||++|.||.| ++. ++.+.+.++||.|+|.+++ .++|||
T Consensus 48 ~~~~G~~~~lP~G~~i~~~L~~~~~~~~~~~Gy~ev~tP~l~~~~l~~k~sGh~~~f~~emy~~~d~g~~~l~e~l~LrP 127 (519)
T 4hvc_A 48 HDISGCYILRPWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTELAEPIAIRP 127 (519)
T ss_dssp CSSTTCEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTTSCCSCGGGGGGCEEEEEETTEEEEEEEEECS
T ss_pred cCCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEeccccccHHHHhcccCCcccccccceEEeccCCcccccceeeCC
Confidence 36799999999999999999999999999999999999999 333 3356688999999998754 699999
Q ss_pred CCCHHHHHHHHhC----CCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcccHHHH---HHHHHHHHHHc
Q 001059 782 ELRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEV---LKVTMDIVTRF 850 (1170)
Q Consensus 782 D~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEv---i~la~~~l~~l 850 (1170)
+.|++++++++.. +.+|+|+||+|+|||+| +++. |.|||+|.++++|+.....+++|+ +.++.++++.|
T Consensus 128 tse~~i~~~~~~~i~SyrdLPlrl~q~g~~fR~E~~~~~Gl~R~ReF~q~e~h~~~~~~e~a~~E~~~~l~~~~~i~~~l 207 (519)
T 4hvc_A 128 TSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHSAFATMEEAAEEVLQILDLYAQVYEEL 207 (519)
T ss_dssp SSHHHHHHHHHHHCSSGGGCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHhhccccccCCeEEEEEcCeeeCCCCCCCCCcceeEEEEeeEEEEecCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988762 34699999999999998 6554 556799999999888888888875 56778888886
Q ss_pred -CCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHH
Q 001059 851 -FHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 929 (1170)
Q Consensus 851 -gi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~ 929 (1170)
|+. +.+...+. .++
T Consensus 208 l~lp--~~~~~~t~--------------------------~e~------------------------------------- 222 (519)
T 4hvc_A 208 LAIP--VVKGRKTE--------------------------KEK------------------------------------- 222 (519)
T ss_dssp SCCC--CEEEECCT--------------------------TTS-------------------------------------
T ss_pred cCCc--ceeeecCC--------------------------ccc-------------------------------------
Confidence 664 44332210 000
Q ss_pred HHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEc---cCCCCCCCcccceEEEEEeccCCCcccccccc
Q 001059 930 LRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYID---ALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1006 (1170)
Q Consensus 930 ~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~D---l~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~ 1006 (1170)
+.|.. ..+.++ ++..|.. -.|++|..-
T Consensus 223 --~~Ga~--------------------------------~t~~iEa~~p~~gr~~--q~gT~~~Lg-------------- 252 (519)
T 4hvc_A 223 --FAGGD--------------------------------YTTTIEAFISASGRAI--QGGTSHHLG-------------- 252 (519)
T ss_dssp --CTTSS--------------------------------EEEEEEEEETTTTEEE--EEEEEEEEE--------------
T ss_pred --cCCch--------------------------------hheeeeeeeccCCCEE--eeccccccc--------------
Confidence 00100 001111 1111211 134444331
Q ss_pred eeccccccchhhhhccccccccc--CCCCCCCCceEEeccHHHHHhhccC------CCCCCCCCCCceEEEEEcCC----
Q 001059 1007 LLAVGGRYDYLLHRMWDREYVGY--ASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRGG---- 1074 (1170)
Q Consensus 1007 ~I~~GGRYD~L~~~fg~~~~~~~--~g~~~~~pAvGfaiglerL~~~L~~------~~~~~~~~~~~~vlv~~~~~---- 1074 (1170)
+++.++|+-.- ... -|.+..+--.+|+++ +|++.+|.+ +...+...+|.+|+|++++.
T Consensus 253 --------~~~s~~~~i~y-~d~~~~g~~~~vh~~~~Gi~-~R~l~aliE~~~d~~gl~~P~~laP~qV~Iipi~~~~~~ 322 (519)
T 4hvc_A 253 --------QNFSKMFEIVF-EDPKIPGEKQFAYQNSWGLT-TRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNAL 322 (519)
T ss_dssp --------THHHHHHTCEE-ECTTSTTCEEECEEEEEEEE-THHHHHHHHHHCBTTBCCCCTTTCSCSEEEEECCC---C
T ss_pred --------chhhhhcCcEE-eccccCCCEEEEEEccccHH-HHHHHHHHHHhCccccccccccCCCeEEEEEEecCcccc
Confidence 23333342110 000 111111222366777 999887752 33334456789999999852
Q ss_pred -----CccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchH
Q 001059 1075 -----GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRE 1149 (1170)
Q Consensus 1075 -----~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~ 1149 (1170)
+.....|.++++.||+.|++|++++...+++++++++|+..|+|++|+||++|+++|+|+||++++|++..|+++
T Consensus 323 ~~~~~e~~~~~a~~l~~~L~~~Girv~~Ddr~~~s~G~K~~~ael~GiP~~ivIG~kele~g~V~vr~R~tgeq~~v~~~ 402 (519)
T 4hvc_A 323 SEEDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVRRDTGEKLTVAEN 402 (519)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCEEECCCSSSCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEETTTCCEEEEEGG
T ss_pred cchhhHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHhcCCCEEEEECchhhcCCeEEEEECCCCCccceeHH
Confidence 235678999999999999999988774358999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccC
Q 001059 1150 SLVRFLLDAIASQFRN 1165 (1170)
Q Consensus 1150 ~l~~~l~~~l~~~~~~ 1165 (1170)
++++.|.++|+..++|
T Consensus 403 el~~~l~~ll~~i~~~ 418 (519)
T 4hvc_A 403 EAETKLQAILEDIQVT 418 (519)
T ss_dssp GHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999888776655
No 277
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.8e-28 Score=301.80 Aligned_cols=187 Identities=18% Similarity=0.157 Sum_probs=133.6
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--------hhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--------LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~--------~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
.....+.|++|.+..++....|+.||||++...... ....+++.+|+++|+++ .|+||+++++++.
T Consensus 238 w~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e----- 312 (569)
T 4azs_A 238 WQNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE----- 312 (569)
T ss_dssp EECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE-----
T ss_pred hhhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE-----
Confidence 345678899999999898889999999999754211 12335699999999999 7999999998873
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...+|||||||+| +|.+++...+++++. .|+.||+.||+|
T Consensus 313 -----------------------------------d~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~y 354 (569)
T 4azs_A 313 -----------------------------------NAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAA 354 (569)
T ss_dssp -----------------------------------CSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHH
T ss_pred -----------------------------------ECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHH
Confidence 35678999999976 999999998888865 478999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|||||||||+||||+.+|.+||+|||+|+...... ...++.+||+.|||||++.+ .+..
T Consensus 355 lH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~---------------~~~~t~vGTp~YmAPE~l~g--~~~~ 417 (569)
T 4azs_A 355 LEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC---------------SWPTNLVQSFFVFVNELFAE--NKSW 417 (569)
T ss_dssp HHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC------------------CCSHHHHHHHHHHHHHHC--------
T ss_pred HHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC---------------ccccCceechhhccHHHhCC--CCCC
Confidence 999999999999999999999999999999998653221 12345689999999999987 4678
Q ss_pred cchhHHHHHHHHHhhcC
Q 001059 589 KADMYSLGIVFFELWHP 605 (1170)
Q Consensus 589 ksDIwSlGviL~ELltP 605 (1170)
++|+||+|+++++|+++
T Consensus 418 ~~d~~s~g~~~~~l~~~ 434 (569)
T 4azs_A 418 NGFWRSAPVHPFNLPQP 434 (569)
T ss_dssp -----------CCCCTT
T ss_pred cccccccccchhhhccc
Confidence 89999999999998753
No 278
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803}
Probab=99.94 E-value=4.4e-26 Score=272.14 Aligned_cols=335 Identities=10% Similarity=0.073 Sum_probs=237.5
Q ss_pred cccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC---CCcccccceEEEeccC----Cc
Q 001059 707 GTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHG----GD 775 (1170)
Q Consensus 707 ~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~----G~ 775 (1170)
+-++....+.|+.+|+|.++.+++.|++.+++.+.++||++|.||+| .+.. +.+.+.++||+|.|.+ |+
T Consensus 36 glid~r~~~~G~~~~lP~G~~i~~~L~~~~~~~~~~~Gy~eV~tP~l~~~el~~k~sgh~~~f~~emy~v~d~g~~~~~~ 115 (518)
T 3ial_A 36 ELVDRRYPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKGFEAECFWVEKGGLQPLEE 115 (518)
T ss_dssp TCEETTSSSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTSSHHHHHHHGGGCEEEEEETTEEEEE
T ss_pred CCcccCCCCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEEcccccCHHHHHhhcCCcccccccEEEEecCCCcccCc
Confidence 33443246799999999999999999999999999999999999999 3322 2456789999999986 68
Q ss_pred eeeecCCCCHHHHHHHHhC----CCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcccHHHHHHH---HH
Q 001059 776 LLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKV---TM 844 (1170)
Q Consensus 776 ~laLRPD~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEvi~l---a~ 844 (1170)
.++|||+.|++++++++.. +..|+|+||+|+|||+| +++. |.|||+|.++++||.....++.|+..+ +.
T Consensus 116 ~l~LrPt~e~~i~~~~~~~i~SyrdLPlrl~q~~~~fR~E~~~~~GL~R~REF~q~e~h~f~~~~e~a~~e~~~~l~~~~ 195 (518)
T 3ial_A 116 RLALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNTKPLIRVREIHWNEAHCCHATAEDAVSQLSDYWKVID 195 (518)
T ss_dssp EEEECSSSHHHHHHHHHHHCCBGGGCCEEEEEEEEEECTTCCSCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ceeECCCCcHHHHHHHHhhhcccccCCeEEEEEeceecCCCCCCCCCceeeEEEEeeEEEEECCHHHHHHHHHHHHHHHH
Confidence 9999999999999988762 35699999999999998 5654 556799999999998888888877654 58
Q ss_pred HHH-HHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHH
Q 001059 845 DIV-TRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVN 923 (1170)
Q Consensus 845 ~~l-~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 923 (1170)
+++ +.||+. +.+.. + ++ .++
T Consensus 196 ~i~~~~LGlp--~~~~~--~------------~~------------~e~------------------------------- 216 (518)
T 3ial_A 196 TIFSDELCFK--GQKLR--R------------VC------------WDR------------------------------- 216 (518)
T ss_dssp HHHTTTTCCC--CEEEE--E------------CG------------GGC-------------------------------
T ss_pred HHHHHhcCCc--EEeee--c------------Ch------------hhc-------------------------------
Confidence 888 888885 43221 0 00 000
Q ss_pred HHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCccccc
Q 001059 924 RLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLV 1003 (1170)
Q Consensus 924 ~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~ 1003 (1170)
..|. ...+.+|.-+.-|-..-.|++|..
T Consensus 217 --------~~gA--------------------------------~yt~~iE~~~pdgr~ie~gt~~~L------------ 244 (518)
T 3ial_A 217 --------FPGA--------------------------------DYSEVSDVVMPCGRVLQTAGIHNL------------ 244 (518)
T ss_dssp --------CTTC--------------------------------SEEEEEEEECTTSCEEEEEEEEEE------------
T ss_pred --------cCCC--------------------------------ccceEEEEEcCCCCEEEEeceecc------------
Confidence 0010 011222222211211123444322
Q ss_pred ccceeccccccchhhhhcccccccccCCCCCCCCce-EEeccHHHHHhhcc------CCCCCCCCCCCceEEEEEcCCC-
Q 001059 1004 EGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGV-GASLALETIIQHYP------VDFKPVRNEAGTSVLVCSRGGG- 1075 (1170)
Q Consensus 1004 ~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAv-GfaiglerL~~~L~------~~~~~~~~~~~~~vlv~~~~~~- 1075 (1170)
|- ++.++|+-. +...-|... .|-. -++++ +|++.+|. .+...+...+|.+|+|+++...
T Consensus 245 -------g~---~~s~rf~i~-y~d~~g~~~-~~h~~~~G~~-~R~iaaliE~~~de~Gl~lP~~LAP~qV~IiPi~~~~ 311 (518)
T 3ial_A 245 -------GQ---RFSSTFDIL-YANKANESV-HPYLTCAGIS-TRVLACALSIHGDSGGLVLPPLIAPIHVVIIPIGCGK 311 (518)
T ss_dssp -------ET---HHHHHTTCC-EECTTCCEE-CCEEEEEEEE-THHHHHHHHHHCBTTBCCCCGGGCSCSEEEEEESCSC
T ss_pred -------cc---hhhhhcCcE-EECCCCCEe-eeEEeccchH-HHHHHHHHHHhCCCCccccCCccceEEEEEEEeecCc
Confidence 10 223333211 011112222 2221 12233 99987763 1234444578999999998632
Q ss_pred --------ccHHHHHHHHHHHHHc-CCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCc--cc
Q 001059 1076 --------GLLVERMELVAELWEE-NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKK--EK 1144 (1170)
Q Consensus 1076 --------~~~~~a~~ia~~LR~~-Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~e--q~ 1144 (1170)
.....|.++++.|++. |++|++++..+.++++++++|+.+|+|++|+||++|+++|+|+|+++++++ +.
T Consensus 312 ~~~~~~~~~~~~~a~~l~~~L~~~~Girv~~Ddr~~~s~G~K~~~ael~GvP~~i~vG~ke~e~g~V~vr~Rd~~~~~k~ 391 (518)
T 3ial_A 312 KNNQESDQQVLGKVNEIADTLKSKLGLRVSIDDDFSKSMGDKLYYYELKGVPLRIEVGQRDLANGQCIVVPRDVGKDQKR 391 (518)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTCCCEEECCCTTSCHHHHHHHHHHTTCSEEEEEEHHHHHTTEEEEEETTTCGGGCE
T ss_pred cccccchHHHHHHHHHHHHHHHhccCeEEEEECCCCCCHHHHHHHHHHcCCCEEEEECcchhhCCEEEEEECCCCcccee
Confidence 3567899999999999 999998776467999999999999999999999999999999999999999 99
Q ss_pred ccchHHH---------------HHHHHHHHHhhccC
Q 001059 1145 EVQRESL---------------VRFLLDAIASQFRN 1165 (1170)
Q Consensus 1145 ~v~~~~l---------------~~~l~~~l~~~~~~ 1165 (1170)
.|+++++ ++.+.++|+..++|
T Consensus 392 ~v~~~el~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (518)
T 3ial_A 392 VIPITEVMKVSSHTTENHELVVKNVIKDELDAYKAR 427 (518)
T ss_dssp EEEHHHHHCCC---------CCCCHHHHHHHHHHHH
T ss_pred EeeHHHHhhhhhhhhhhccccHHHHHHHHHHHHHHH
Confidence 9999999 67777666655543
No 279
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.88 E-value=1.8e-23 Score=255.86 Aligned_cols=185 Identities=21% Similarity=0.196 Sum_probs=133.2
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh------hHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~------~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..+.||+|+||+||+|.+ .++.+|+|+...+..... ..+++.+|+.+|++++||||+++..++..
T Consensus 340 ~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~------- 410 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD------- 410 (540)
T ss_dssp --------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-------
T ss_pred CCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-------
Confidence 356899999999999944 588999998755432211 13458999999999999999944333321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....|+|||||+ ++|.+++.. +..++.||+.||+|||+
T Consensus 411 ---------------------------------~~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~ 449 (540)
T 3en9_A 411 ---------------------------------LDNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHK 449 (540)
T ss_dssp ---------------------------------TTTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHH
Confidence 123489999997 699999876 56899999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccc
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKA 590 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ks 590 (1170)
+||+||||||+|||++. .+||+|||+|+.......... +......+.+||+.|||||++.+. ..|+..+
T Consensus 450 ~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~--------~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~ 519 (540)
T 3en9_A 450 NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV--------DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVY 519 (540)
T ss_dssp TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH--------HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHC
T ss_pred CcCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc--------chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHH
Confidence 99999999999999998 999999999987643211000 000012356899999999998751 2378889
Q ss_pred hhHHHHHHHHHhh
Q 001059 591 DMYSLGIVFFELW 603 (1170)
Q Consensus 591 DIwSlGviL~ELl 603 (1170)
|+||..+-..+..
T Consensus 520 d~ws~vl~~l~~v 532 (540)
T 3en9_A 520 DRWEIILELMKDV 532 (540)
T ss_dssp TTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999887666554
No 280
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=1.1e-21 Score=220.39 Aligned_cols=133 Identities=21% Similarity=0.175 Sum_probs=105.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----------------hhHHHHHHHHHHHHhccCCCceeE
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----------------PVNDRILREVATLSRLQHQHVVRY 419 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----------------~~~~~~~~Ev~iL~~l~HpnIV~l 419 (1170)
.|.+.+.||+|+||.||+|.+ .+|+.||||+++....+. .....+.+|+.+|+.++| +++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v 166 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAV 166 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSS
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCc
Confidence 456669999999999999999 789999999996432211 134568899999999994 444
Q ss_pred EEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHH
Q 001059 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHL 498 (1170)
Q Consensus 420 ~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i 498 (1170)
++++. ....|+|||||+| +|.+ +. ......+
T Consensus 167 ~~~~~-----------------------------------------~~~~~lvmE~~~g~~L~~-l~------~~~~~~i 198 (282)
T 1zar_A 167 PKVYA-----------------------------------------WEGNAVLMELIDAKELYR-VR------VENPDEV 198 (282)
T ss_dssp CCEEE-----------------------------------------EETTEEEEECCCCEEGGG-CC------CSCHHHH
T ss_pred CeEEe-----------------------------------------ccceEEEEEecCCCcHHH-cc------hhhHHHH
Confidence 44331 1234899999975 8887 42 1235579
Q ss_pred HHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcch
Q 001059 499 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 541 (1170)
Q Consensus 499 ~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~ 541 (1170)
+.||+.||.|||++||+||||||+|||++ ++.+||+|||+|+
T Consensus 199 ~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~ 240 (282)
T 1zar_A 199 LDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSV 240 (282)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCE
T ss_pred HHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCe
Confidence 99999999999999999999999999999 9999999999986
No 281
>3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens}
Probab=99.81 E-value=8.6e-19 Score=205.04 Aligned_cols=310 Identities=15% Similarity=0.053 Sum_probs=199.0
Q ss_pred Cccc-cccchhhhhhhhHHhHHHHHHHH-cC-Cccccccceec---cCCCcccccceEEEeccCCceeeecCCCCHHHHH
Q 001059 716 TSSI-QYSDLDTELRDYVVQVTKEMFRQ-HC-AKHLEIEPMYL---LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIR 789 (1170)
Q Consensus 716 ~G~~-D~lp~e~~~~~~I~~~i~~~f~~-~G-y~~I~tP~~~~---~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR 789 (1170)
.|.. ||.|..+.+++.|++.+++-|.. .| +.+|.||.... +++++.+. ++||| +|+|.+=
T Consensus 93 ~g~~p~~gP~G~~l~~nl~~~w~~~~~~~~~~~~eV~tp~~~~~~~SGH~d~~~-------------~~LRP-eTaqg~~ 158 (459)
T 3ikl_A 93 SGCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLLPGDSAFR-------------GGLRE-NLLHGAL 158 (459)
T ss_dssp TTCSCCBCHHHHHHHHHHHHHHHHHHTTSSCSCEECCCCSBCCSCCCSSCSCCT-------------TB-CS-CSHHHHH
T ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhccCceEeeccccccccccCcchhhhc-------------ceECC-CCChhHH
Confidence 3445 99999999999999977777754 66 66699999722 23333333 89999 7777652
Q ss_pred HHH-----hCC-CCceeEEEecCeEEcCC----CC---CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCc
Q 001059 790 WAI-----SNQ-KSSFKRYEISSVYRRAI----GH---SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAE 854 (1170)
Q Consensus 790 ~~~-----~~~-~~P~r~~Y~g~VfR~e~----~~---~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~ 854 (1170)
..- .+. ..|++++++|++||+|. +. -|.+||+|..+++|..++...+ ..++..+..+++.||+..
T Consensus 159 ~nfk~~~~s~r~~LP~~iaqig~~FR~E~g~~~~~~GL~RvrEFtq~E~~~F~~Pe~~~e~~~~~~~~~~~~~~~LGi~~ 238 (459)
T 3ikl_A 159 EHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKQIRNGVKSIGEKTEASLVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSP 238 (459)
T ss_dssp HHTTTTTGGGTTBSSEEEEEEEEEECCC----------CCCCEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHHCSSG
T ss_pred HHHhhhhhhccccCCeEEEEEeeeeecccccccCCCCcccccceeeeeEEEEeChhHHHHHHHHHHHHHHHHHHHhCCCh
Confidence 221 122 46999999999999984 22 3567899999999987765433 367777888888888752
Q ss_pred ceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcC
Q 001059 855 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 934 (1170)
Q Consensus 855 ~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 934 (1170)
..+.+... . +++ ..+
T Consensus 239 -~~~r~~~~----------~-~ee----------A~~------------------------------------------- 253 (459)
T 3ikl_A 239 -SNFSSSDC----------Q-DEE----------GRK------------------------------------------- 253 (459)
T ss_dssp -GGEEEEEE----------C-CSS----------SSC-------------------------------------------
T ss_pred -hhEEEeec----------C-chH----------HHh-------------------------------------------
Confidence 22222220 0 000 000
Q ss_pred ChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 935 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
.+.+...+.-| -+ |++ .++..+-|
T Consensus 254 -----------------------------------~~DiE~~~p~G----~~---E~~--------------g~sn~tDf 277 (459)
T 3ikl_A 254 -----------------------------------GNKLYYNFPWG----KE---LIE--------------TLWNLGDH 277 (459)
T ss_dssp -----------------------------------EEEEEEECSSC----EE---EEE--------------EEEEEETH
T ss_pred -----------------------------------hcCeEEEcCCc----eE---EEe--------------eeeccchh
Confidence 01011010000 00 111 11111122
Q ss_pred chhh--hhcccccccccCCCCCCCC-ceEEeccHHHHH-hhccC-----C-------------CCCCCCCCCceEEEEEc
Q 001059 1015 DYLL--HRMWDREYVGYASRTNPPS-GVGASLALETII-QHYPV-----D-------------FKPVRNEAGTSVLVCSR 1072 (1170)
Q Consensus 1015 D~L~--~~fg~~~~~~~~g~~~~~p-AvGfaiglerL~-~~L~~-----~-------------~~~~~~~~~~~vlv~~~ 1072 (1170)
|-.- ..++- .+...-|.++.+| .+.-++|++|++ ++|++ + +..+...+|.+|.|+ .
T Consensus 278 qL~~~~~~~~~-~~~~~dg~~k~~P~vi~~s~Gv~R~~~AiLe~~~de~~~~~~~~~~~~R~vl~lP~~LAP~qV~Ii-i 355 (459)
T 3ikl_A 278 ELLHMYPGNVS-KLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKKNLHRKVLKLHPCLAPIKVALD-V 355 (459)
T ss_dssp HHHHHSCSCSS-SSCCBSSSCBCCCEEEEEEEEHHHHHHHHHHTTCC-------------CCCCCCCTTTCSCCEEEE-E
T ss_pred hhhccccccCc-eeEccCCCeeeeeEEEEecccHHHHHHHHHHHHhhhccccccccccccceEEEeCcccCCceEEEE-e
Confidence 1100 00000 0000112222234 447789999974 55542 1 233345678898888 5
Q ss_pred CC---CccHHHHHHHHHHHHHcCCeEEEeeCC--CCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccc
Q 001059 1073 GG---GGLLVERMELVAELWEENIKAQFVPVP--DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQ 1147 (1170)
Q Consensus 1073 ~~---~~~~~~a~~ia~~LR~~Gi~v~~~~~~--~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~ 1147 (1170)
.. +.....|.++++.||+.|++|++++.. +.+++++|++|++.|+||+|+||++|+++|+|+||++++++|..|+
T Consensus 356 ~~~~~e~~~~~A~~L~~~Lr~~GIrV~~d~Ddr~~~siGkK~r~Ad~iGiPy~IiVG~kEle~g~VtVR~Rdtgeq~~v~ 435 (459)
T 3ikl_A 356 GRGPTLELRQVCQGLFNELLENGISVWPGYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRSRDTTMKEMMH 435 (459)
T ss_dssp SSCCSTTHHHHHHHHHHHHHHTSCCEECGGGSSSCCTTHHHHHHHGGGTCSEEEEECTTSTTSSEEEEEETTTCCCCCEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCeEEEeecCCcCCCHHHHHHHHHHcCCCEEEEECchhhhCCEEEEEECCCCceEEEE
Confidence 32 567899999999999999999842322 4789999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhh
Q 001059 1148 RESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1148 ~~~l~~~l~~~l~~~ 1162 (1170)
+++++++|.+.+++.
T Consensus 436 ldeli~~l~~~i~~~ 450 (459)
T 3ikl_A 436 ISKLKDFLIKYISSA 450 (459)
T ss_dssp TTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999888654
No 282
>1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B*
Probab=99.81 E-value=2.5e-20 Score=221.02 Aligned_cols=126 Identities=21% Similarity=0.162 Sum_probs=102.9
Q ss_pred CCce-EEeccHHHHH-hhccCC----------C--------CCCCCCCCceEEEE-EcCC-CccHHHHHHHHHHHHHcCC
Q 001059 1036 PSGV-GASLALETII-QHYPVD----------F--------KPVRNEAGTSVLVC-SRGG-GGLLVERMELVAELWEENI 1093 (1170)
Q Consensus 1036 ~pAv-GfaiglerL~-~~L~~~----------~--------~~~~~~~~~~vlv~-~~~~-~~~~~~a~~ia~~LR~~Gi 1093 (1170)
+|.| +.++|++|++ ++|+++ . ..+...+|.+|+|+ +.+. +....+|.++++.||+.|+
T Consensus 290 ~P~vi~~s~Gv~R~i~aile~~~~~~~~~~~~g~d~~r~~l~~P~~lAP~qV~Ii~~~~~~e~~~~~A~~l~~~Lr~~Gi 369 (454)
T 1g5h_A 290 VPCVLSVSGDVDLGTLAYLYDSFQLAENSFARKKSLQRKVLKLHPCLAPIKVALDVGKGPTVELRQVCQGLLNELLENGI 369 (454)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHEEC------------CCEECCCTTTCSCCEEEEECSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred eeEEEeCcccHHHHHHHHHHHhcchhhcccccCCcccceeEecCcccCCCeEEEEEeCCCcHHHHHHHHHHHHHHHHCCC
Confidence 5666 8899999996 555411 1 22334678899998 5521 3468899999999999999
Q ss_pred eEE--EeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1094 KAQ--FVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1094 ~v~--~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+|+ ++...+.++++++++|++.|+|++|+||++|+++|+|+||++++++|..|+++++++.|.+.++.
T Consensus 370 ~v~~~~Ddr~~~sigkk~r~Ad~~GiP~~IiVG~~Ele~g~VtvR~r~t~eq~~v~l~el~~~l~~~l~~ 439 (454)
T 1g5h_A 370 SVWPGYSETVHSSLEQLHSKYDEMSVLFSVLVTETTLENGLIQLRSRDTTMKEMMHISKLRDFLVKYLAS 439 (454)
T ss_dssp CEEEGGGSCCCSCHHHHHHHHHHTTCSEEEEECHHHHHHCEEEEEETTTCCEEEEETTSHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCHHHHHHHHHHcCCCEEEEECcchhhCCEEEEEECCCCcEEEEEHHHHHHHHHHHHhc
Confidence 996 44322568999999999999999999999999999999999999999999999999999887753
No 283
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.7e-18 Score=191.83 Aligned_cols=138 Identities=22% Similarity=0.254 Sum_probs=108.0
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcE--EEEEEEecCCCCh----------------------hhHHHHHHHHHHHHhcc
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRH--YAVKKIRLKDKSL----------------------PVNDRILREVATLSRLQ 412 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~--vAVK~i~~~~~~~----------------------~~~~~~~~Ev~iL~~l~ 412 (1170)
|++.+.||+|+||.||+|.+..+|+. ||||+++...... .....+.+|+..|+.+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999778999 9999976432110 11236789999999999
Q ss_pred CCCc--eeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC--C----cHHHHH
Q 001059 413 HQHV--VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP--R----TLRQVF 484 (1170)
Q Consensus 413 HpnI--V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~--g----sL~~~l 484 (1170)
|++| +.++.. ...++|||||+ | +|.+..
T Consensus 129 ~~~i~~p~~~~~--------------------------------------------~~~~lVmE~~g~~g~~~~~L~~~~ 164 (258)
T 1zth_A 129 EAGVSVPQPYTY--------------------------------------------MKNVLLMEFIGEDELPAPTLVELG 164 (258)
T ss_dssp HTTCCCCCEEEE--------------------------------------------ETTEEEEECCEETTEECCBHHHHG
T ss_pred hCCCCCCeEEEc--------------------------------------------CCCEEEEEecCCCCCccccHHHHh
Confidence 9875 223211 12379999995 3 676654
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHH-hCCccccCCCCCceeecCCCCEEEeecCcchhc
Q 001059 485 ESYDHFDKELAWHLFRQIVEGLAHIH-GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543 (1170)
Q Consensus 485 ~~~~~l~e~~~~~i~~qI~~gL~yLH-s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~ 543 (1170)
.. .++..+..++.||+.||.||| ++||+||||||+|||++. .++|+|||+|...
T Consensus 165 ~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 165 RE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp GG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred hc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 32 235567889999999999999 999999999999999988 9999999999753
No 284
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.56 E-value=4.7e-15 Score=171.94 Aligned_cols=134 Identities=18% Similarity=0.213 Sum_probs=94.6
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------------hhhHHHH--------HHHHHHHHhccCCCc
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------------LPVNDRI--------LREVATLSRLQHQHV 416 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~------------~~~~~~~--------~~Ev~iL~~l~HpnI 416 (1170)
|++...||.|+||.||+|.+. +|+.||||+++....+ ....... .+|+..|.++.++++
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 899999999999999999986 7999999998642111 0001111 245555555544333
Q ss_pred ee--EEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHH
Q 001059 417 VR--YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKE 493 (1170)
Q Consensus 417 V~--l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~ 493 (1170)
.. .+.+ ...+|||||++| .|.++. ..+
T Consensus 176 ~vp~p~~~--------------------------------------------~~~~LVME~i~G~~L~~l~------~~~ 205 (397)
T 4gyi_A 176 PVPEPIAQ--------------------------------------------SRHTIVMSLVDALPMRQVS------SVP 205 (397)
T ss_dssp SCCCEEEE--------------------------------------------ETTEEEEECCSCEEGGGCC------CCS
T ss_pred CCCeeeec--------------------------------------------cCceEEEEecCCccHhhhc------ccH
Confidence 21 1100 112799999987 554432 223
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCC----------CEEEeecCcch
Q 001059 494 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----------DIKIGDFGLAK 541 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~----------~vKL~DFGlA~ 541 (1170)
.+..++.||+.+|.|||++|||||||||.|||++.++ .+.|+||+-+.
T Consensus 206 ~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 206 DPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence 4567889999999999999999999999999998776 38899999765
No 285
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=99.52 E-value=1.5e-14 Score=170.15 Aligned_cols=143 Identities=13% Similarity=0.146 Sum_probs=120.6
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
..|+.+|+|..+.+++.|++.+++.+.++||++|.||.| .+ .++.+.+.++||++. ++.++|||+.|+|++
T Consensus 161 g~G~~~~~p~ga~l~~~L~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~---~~~l~LrPt~e~~i~ 237 (425)
T 2dq3_A 161 GSRFTVIAGWGARLERALINFMLDLHTKKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKCE---RDNLYLIPTAEVPLT 237 (425)
T ss_dssp CSSCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHHHSCTTTTGGGSCBCT---TTCCEECSSTHHHHH
T ss_pred CCCceEECcHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHHhcCCCCcChhhheEec---CCeEEEcCCCcHHHH
Confidence 589999999999999999999999999999999999999 22 233456788999986 478999999999999
Q ss_pred HHHHhC----CCCceeEEEecCeEEcCCCCC--------CCCceeEeEEEEeCCCCc--ccHHHHHHHHHHHHHHcCCCc
Q 001059 789 RWAISN----QKSSFKRYEISSVYRRAIGHS--------PPNRYLQGDFDIIGGASA--LTEAEVLKVTMDIVTRFFHAE 854 (1170)
Q Consensus 789 R~~~~~----~~~P~r~~Y~g~VfR~e~~~~--------~~~ef~Q~GvEiiG~~~~--~aDaEvi~la~~~l~~lgi~~ 854 (1170)
++++.. ...|+|+||+|+|||+|.++. |.+||+|+++++|+.++. ....|++.++.++|+.||+.
T Consensus 238 ~~~~~~i~s~~~LPlrl~~~g~~FR~E~~~~Gr~~~Gl~R~reF~q~E~~~f~~pe~s~~~~~e~i~~~~~il~~LGL~- 316 (425)
T 2dq3_A 238 NLYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQFDKVELVKIVHPDTSYDELEKLVKDAEEVLQLLGLP- 316 (425)
T ss_dssp GGGTTEEEETTTCCEEEEEEEEEECCCCSCCSSSCSSSSSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHHTCC-
T ss_pred HHHHhhccccccCCeEEEEecCEecCCCCcccccccCcccccceEEeeEEEECCHHHHHHHHHHHHHHHHHHHHHCCCc-
Confidence 988763 356999999999999988542 445799999999998764 23479999999999999996
Q ss_pred ceE-EEeCc
Q 001059 855 SCD-IHLNH 862 (1170)
Q Consensus 855 ~~~-i~lg~ 862 (1170)
+. +.+..
T Consensus 317 -~rvv~l~~ 324 (425)
T 2dq3_A 317 -YRVVELCT 324 (425)
T ss_dssp -EEEEECCT
T ss_pred -eEEEEecC
Confidence 65 55554
No 286
>1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A*
Probab=99.44 E-value=8.4e-14 Score=156.39 Aligned_cols=120 Identities=13% Similarity=0.112 Sum_probs=89.0
Q ss_pred cchhhhhhhhHHhHHHHHHHHcCCccccccceecc-----C--CCcccccceEEEeccCCceeeecCCCCHHHHHHHHhC
Q 001059 722 SDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL-----G--DCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN 794 (1170)
Q Consensus 722 lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~-----~--~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~ 794 (1170)
.....+++..+.+.++++|.++||.+|+||+|... . .++. .++|.+. ..|+.+.||..-.....+.++ .
T Consensus 11 ~~~~~~~rs~i~~~ir~~f~~~GF~EVeTP~l~~~~~~~~~~~~~e~--a~~f~~~-~~~~~~~L~~Spe~~~~~l~~-~ 86 (294)
T 1nnh_A 11 ISPTLDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEG--MEPAEVE-IYGVKMRLTHSMILHKQLAIA-M 86 (294)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCEEECCCCEESCCCCCCSCTTCCC--CCCCEEE-ETTEEEEECSCSHHHHHHHHH-T
T ss_pred hHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEccchhccCCCCCc--ceeEEEE-cCCCCEEeccChHHHHHHHhh-c
Confidence 34567889999999999999999999999999433 1 2222 6677753 335677887422222333333 1
Q ss_pred CCCceeEEEecCeEEcCCCCC---CCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcC
Q 001059 795 QKSSFKRYEISSVYRRAIGHS---PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFF 851 (1170)
Q Consensus 795 ~~~P~r~~Y~g~VfR~e~~~~---~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lg 851 (1170)
.+.|+||+|+|||+|+||. +.+ ||+|+++|++|.+ +.|++.++.++++.++
T Consensus 87 --g~~rvf~ig~~FR~E~pq~~~~RH~~EFtqle~e~~~~~----~~~l~~~~e~l~~~l~ 141 (294)
T 1nnh_A 87 --GLKKIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVERAK----MEDIMRLIERLVYGLF 141 (294)
T ss_dssp --TCCEEEEEEEEECCCCGGGCSSSCCSEEEEEEEEEETCC----HHHHHHHHHHHHHHHH
T ss_pred --CccceEEEEccEeCCCCCCCCCccccceeEEEEEecCCC----HHHHHHHHHHHHHHHH
Confidence 3789999999999999663 444 7999999999974 7899999999988764
No 287
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=99.39 E-value=5.3e-13 Score=157.91 Aligned_cols=144 Identities=8% Similarity=0.033 Sum_probs=118.9
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC--CCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
...|+.+|+|..+.+++.|++.+++.+.++||++|.||.| .+.+ +.+.+.++||++.| +.++|||+.|+++
T Consensus 181 ~g~G~~~~~p~ga~l~~aL~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~d---~~l~LrPt~e~~~ 257 (455)
T 2dq0_A 181 SGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGSTSFEDFEDVIYKVED---EDLYLIPTAEHPL 257 (455)
T ss_dssp TCTTCCEEEHHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHTTSCTTHHHHTCCBBTT---SSCEECSSTHHHH
T ss_pred cCCCeEEECCHHHHHHHHHHHHHHHHHHHcCCEEEeCCcccCHHHHHhcCCCCCChHhhCeecC---CcEEEcCcCcHHH
Confidence 3579999999999999999999999999999999999999 3333 34557889999865 6899999999999
Q ss_pred HHHHHh----CCCCceeEEEecCeEEcCCCCC--------CCCceeEeEEEEeCCCCcc--cHHHHHHHHHHHHHHcCCC
Q 001059 788 IRWAIS----NQKSSFKRYEISSVYRRAIGHS--------PPNRYLQGDFDIIGGASAL--TEAEVLKVTMDIVTRFFHA 853 (1170)
Q Consensus 788 aR~~~~----~~~~P~r~~Y~g~VfR~e~~~~--------~~~ef~Q~GvEiiG~~~~~--aDaEvi~la~~~l~~lgi~ 853 (1170)
++++.. +...|+|+|++|+|||+|.++. |.++|+|+.+.+|+.+... .-.|++.++.++++.||+.
T Consensus 258 ~~~~~~~~~s~~~LPlr~~~~g~~FR~E~~~~G~~~~GL~R~rqF~kvE~~~f~~pe~s~~~~~e~l~~~~~il~~LGL~ 337 (455)
T 2dq0_A 258 AGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIP 337 (455)
T ss_dssp HHTTTTEEEETTTCSEEEEEEEEEECCCTTCSSCSCCSSSSCSEEEEEEEEEEECTTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhCccCchhCCEEEEEecCcccCCCCccccccCCceeeeeeEeeeEEEecCHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 998876 3457999999999999998754 4567999888888876321 1239999999999999995
Q ss_pred cceEEEeCc
Q 001059 854 ESCDIHLNH 862 (1170)
Q Consensus 854 ~~~~i~lg~ 862 (1170)
+.+....
T Consensus 338 --yrv~~~~ 344 (455)
T 2dq0_A 338 --YRVVNIC 344 (455)
T ss_dssp --EEEEECC
T ss_pred --eEEEECC
Confidence 6665554
No 288
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=99.37 E-value=8.5e-13 Score=154.97 Aligned_cols=143 Identities=8% Similarity=0.099 Sum_probs=118.3
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
..|+.+|+|..+.+++.|++.+++.+.++||++|.||.| .+ .++.+.+.++||++.| +.++|||..|++++
T Consensus 155 g~G~~~~~p~ga~l~~aL~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~d---~~l~L~Pt~e~~~~ 231 (421)
T 1ses_A 155 GSRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAE---TDLYLTGTAEVVLN 231 (421)
T ss_dssp CSSCCCEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGSCBBTT---SSEEECSSTHHHHH
T ss_pred CCCeEEECcHHHHHHHHHHHHHHHHHHHcCCEEEeCCceecHHHHHhcCCCCcCchhcEEEcC---CeEEEeecCcHHHH
Confidence 479999999999999999999999999999999999999 22 2345667899999875 78999999999999
Q ss_pred HHHHhC----CCCceeEEEecCeEEcC-----CCCC---CCCceeEeEEEEeCCCC-cccHH---HHHHHHHHHHHHcCC
Q 001059 789 RWAISN----QKSSFKRYEISSVYRRA-----IGHS---PPNRYLQGDFDIIGGAS-ALTEA---EVLKVTMDIVTRFFH 852 (1170)
Q Consensus 789 R~~~~~----~~~P~r~~Y~g~VfR~e-----~~~~---~~~ef~Q~GvEiiG~~~-~~aDa---Evi~la~~~l~~lgi 852 (1170)
+++... ...|+|+||+|+|||+| +|+. |.++|+|+++..|+.++ ..++. |++.++.++|+.||+
T Consensus 232 ~~~~~~~~s~~~LPlr~~~~g~~FR~E~g~~Gr~~~GL~R~rqF~q~E~~~f~~p~~e~s~~~~~e~~~~~~~il~~LGL 311 (421)
T 1ses_A 232 ALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLEL 311 (421)
T ss_dssp HTTTTCEEEGGGCSEEEEEEEEEECCCCSCCCSCCCTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHhcccccCchhCCEEEEecCCeecCCccccCcCCCCCeeeeeeeeeeEEEEeCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 988763 24699999999999999 5554 45569999888888762 24443 999999999999999
Q ss_pred CcceE-EEeCc
Q 001059 853 AESCD-IHLNH 862 (1170)
Q Consensus 853 ~~~~~-i~lg~ 862 (1170)
. +. +.+..
T Consensus 312 ~--~rvv~l~t 320 (421)
T 1ses_A 312 P--YRLVEVAT 320 (421)
T ss_dssp C--EEEEECCH
T ss_pred c--eEEEEecC
Confidence 6 55 44443
No 289
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A
Probab=99.33 E-value=1.7e-12 Score=145.10 Aligned_cols=130 Identities=8% Similarity=-0.035 Sum_probs=101.8
Q ss_pred hhhHHhHHHHHHHHcCCcccccccee----ccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHh---CCCCceeE
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMY----LLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAIS---NQKSSFKR 801 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~----~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~---~~~~P~r~ 801 (1170)
.+.+++.++++|..+||++|.||.|+ +...+....++||++.++.++.++|||.++++..+.+.. ++..|+|+
T Consensus 73 ~~~l~~~ir~~~~~~Gf~EV~tP~Le~~~l~~~~g~~~~~~m~~~~npl~e~~~LRp~l~p~l~~~~r~~~~~~~~Plrl 152 (288)
T 3dsq_A 73 LLELEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGEDHPLFSQVFWLDGKKCLRPMLAPNLYTLWRELERLWDKPIRI 152 (288)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHHTTSSCC--CCTTTSCEEETTEEECSCSHHHHHHHHHHHTTTSCSCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEECCeeecHHHHhhcCCCcccccEEeecccccchhhhhcChHHHHHHHHHHHhCCCCCEEE
Confidence 46899999999999999999999992 222222112357766655557789999999887765544 24569999
Q ss_pred EEecCeEEcCCCC-CCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEE
Q 001059 802 YEISSVYRRAIGH-SPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 859 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~-~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~ 859 (1170)
|++|+|||+|.++ .+.+||+|++++++|..+...++|++.++.+++++||+++ +.+.
T Consensus 153 feiG~vFR~E~~~~~r~~EF~qle~~i~g~~~~~~f~elkg~le~ll~~LGl~~-~~~~ 210 (288)
T 3dsq_A 153 FEIGTCYRKESQGAQHLNEFTMLNLTELGTPLEERHQRLEDMARWVLEAAGIRE-FELV 210 (288)
T ss_dssp EEEEEEECSCCSSSCCCSEEEEEEEEEETCCGGGHHHHHHHHHHHHHHHHTCCC-CEEE
T ss_pred EEEeeEEecCCCCCCcCccEEEEEEEEEcCCchhhHHHHHHHHHHHHHHcCCCC-cEEe
Confidence 9999999998765 4456899999999999888889999999999999999964 5543
No 290
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=6.6e-13 Score=130.87 Aligned_cols=75 Identities=39% Similarity=0.473 Sum_probs=70.2
Q ss_pred CCccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHHhhhCCCCC
Q 001059 5 DLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEIVPLGQ 81 (1170)
Q Consensus 5 ~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l~~~~~~~~ 81 (1170)
++.+.+.|.|+||++||+++|.+.|.+.++|++.++..|.+.|.+++++|+ ||+|||+||+.+||||++++++-+
T Consensus 52 ~~~~~~~L~v~~p~~YP~~~P~i~l~~~~~l~~~~~~~L~~~L~~~~~e~~--G~~mif~lv~~lqe~l~e~~~~~~ 126 (128)
T 2ebm_A 52 DETVQTTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENL--GMVMIFTLVTAVQEKLNEIVDQIK 126 (128)
T ss_dssp SCCCBEEEEEECCSSTTTSCCEEEEEEESSCCHHHHHHHHHHHHHHHHHHT--TSCCHHHHHHHHHHHHHHHHHHGG
T ss_pred cCceeEEEEEEeCCCCCCCCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhC--CCEEHHHHHHHHHHHHHHHHHHHh
Confidence 356899999999999999999999999899999999999999999999999 999999999999999999876543
No 291
>2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A
Probab=99.29 E-value=1.6e-12 Score=155.16 Aligned_cols=139 Identities=6% Similarity=0.036 Sum_probs=116.1
Q ss_pred CCCccccccchhhhhhhhHHhHHHH-HHHHcCCccccccce----ec--cCCCcccccceEEEe-----c----------
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKE-MFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLL-----T---------- 771 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~-~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~-----D---------- 771 (1170)
...|+.+|+|..+.+++.|++.+++ ++.++||++|.||+| .+ .++.+.+.++||++. |
T Consensus 219 ~~~G~y~~~P~G~~L~~~L~~~~~~e~~~~~G~~EV~tP~L~~~el~~~SGh~~~F~demy~v~~~~~Rd~~~~e~~~~~ 298 (522)
T 2cja_A 219 SSRGQWIHGPQSARIFRTFEKIVLEELLEPLGYREMIFPKLVTWEVWMKSGHAKGVYPEIYYVCPPQTRDPDYWEEVADY 298 (522)
T ss_dssp SSTTCEEECHHHHHHHHHHHHHHHHHTHHHHTCEECBCCSEEEHHHHHHHTGGGTCGGGCCEEECBSCCCHHHHHHHHHH
T ss_pred CCCCeEEECchHHHHHHHHHHHHHHHHHHHcCCEEEECCCcccHHHHhhcCCcCccccceeeeecCCccchhhhhhhhhh
Confidence 6799999999999999999999996 589999999999999 22 234667789999995 3
Q ss_pred ---------------cCCceeeecCCCCHHHHHHHHhC----CCCceeEEE-ecCeEEcCCCC-----CCCCceeEeEEE
Q 001059 772 ---------------HGGDLLELSHELRLPFIRWAISN----QKSSFKRYE-ISSVYRRAIGH-----SPPNRYLQGDFD 826 (1170)
Q Consensus 772 ---------------~~G~~laLRPD~T~~iaR~~~~~----~~~P~r~~Y-~g~VfR~e~~~-----~~~~ef~Q~GvE 826 (1170)
.+++.++|||+.++++++++... ...|+|+|| +|++||+| ++ .|.+||+|.+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~l~LrPt~e~~i~~~f~~~i~s~~~LPlrl~q~ig~~FR~E-pgs~~GL~R~REF~q~E~~ 377 (522)
T 2cja_A 299 YKVTHEVPTKLIKEKIAEPIGGMCYAQCPPFWMYVAGETLPNEEIPVKVFDRSGTSHRYE-SGGIHGIERVDEFHRIEIV 377 (522)
T ss_dssp HHHHSSCCHHHHHHHBCCCCEEECSSSSGGGGGGTTTCEECGGGCSEEEEECSSEEECCC-SSSCCCTTSCSEEEEEEEE
T ss_pred hhccccccccccccccCCCcEEEccCCcHHHHHHHHhcccccccCCeeEEEEcCceEeCC-CCCCCCCeEeEEEEEeeEE
Confidence 14689999999999999887642 346999999 99999999 66 466789999999
Q ss_pred EeCCCCcccH--HHHH-HHHHHHHHHcCCC
Q 001059 827 IIGGASALTE--AEVL-KVTMDIVTRFFHA 853 (1170)
Q Consensus 827 iiG~~~~~aD--aEvi-~la~~~l~~lgi~ 853 (1170)
+||.++...+ .+++ ..+..+++.||+.
T Consensus 378 ~F~~pe~s~ee~ee~i~~~~~~~l~~LGLp 407 (522)
T 2cja_A 378 WIGTKEEVLKCAEELHDRYMHIFNDILDIE 407 (522)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred EEeChHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9997654332 4678 8889999999996
No 292
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=99.27 E-value=2.7e-12 Score=126.47 Aligned_cols=68 Identities=26% Similarity=0.490 Sum_probs=65.5
Q ss_pred ccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHHhhh
Q 001059 7 DVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEI 76 (1170)
Q Consensus 7 ~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l~~~ 76 (1170)
.+.+.|.|+||++||+++|.+.+...++|++.++..|.+.|.+++++|+ ||+|||+||+.+||||.+.
T Consensus 58 ~~~~~L~~~~p~~YP~~~P~i~~~~~~~L~~~~~~~L~~~L~~~~~e~~--G~~mif~lv~~lqe~l~~~ 125 (128)
T 2day_A 58 YVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGL--GTAMLYELIEKGKEILSGP 125 (128)
T ss_dssp CCEEEEEEEECSSTTSSCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTT--TSCCHHHHHHHHHHHHCCC
T ss_pred ceeEEEEEEcCCCCCCCCCCeEEEcCCCCCHHHHHHHHHHHHHHHHHhC--CCEEhHHHHHHHHHHHHhc
Confidence 5899999999999999999999999999999999999999999999999 9999999999999999763
No 293
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=99.26 E-value=3.6e-12 Score=127.26 Aligned_cols=68 Identities=25% Similarity=0.418 Sum_probs=66.5
Q ss_pred ccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHHhhh
Q 001059 7 DVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEI 76 (1170)
Q Consensus 7 ~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l~~~ 76 (1170)
.+.++|.|+||++||+++|.+.|.+.+||++.++..|.+.|.+++++|+ ||+|||+||+.+||||+++
T Consensus 61 ~~~~~L~~~~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~--G~~mif~lv~~lqe~l~~~ 128 (138)
T 2yz0_A 61 ESSITLHFAMTPMYPYTAPEIEFKNVQNVMDSQLQMLKSEFKKIHNTSR--GQEIIFEITSFTQEKLDEF 128 (138)
T ss_dssp CCEEEEEEECCSSTTSSCCEEEEECCCSCCSHHHHHHHHHHHHHHHHST--TSCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCCCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhC--CCEEHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999 9999999999999999998
No 294
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=99.23 E-value=4.6e-12 Score=126.30 Aligned_cols=72 Identities=36% Similarity=0.576 Sum_probs=68.4
Q ss_pred ccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHHhhhCCCC
Q 001059 7 DVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEIVPLG 80 (1170)
Q Consensus 7 ~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l~~~~~~~ 80 (1170)
.+.+.|.|+||++||+++|.+.+...++|++.++..|.+.|.+++++|+ ||+|||+||+.+||||+++..+.
T Consensus 62 ~~~~~L~v~~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~--G~~mif~lv~~lqe~l~~~~~p~ 133 (137)
T 1ukx_A 62 YVQVELRVKCPPTYPDVVPEIDLKNAKGLSNESVNLLKSHLEELAKKQC--GEVMIFELAHHVQSFLSEHNKSG 133 (137)
T ss_dssp SCEEEEEECCCTTTTSSCCCCEEEEEESSSSSHHHHHHHHHHHHHHHHT--TSCCHHHHHHHHHHHHHHHCCCC
T ss_pred ceEEEEEEECCCCCCCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHhC--CCEEhHHHHHHHHHHHHhcCCCC
Confidence 5899999999999999999999988899999999999999999999999 99999999999999999987653
No 295
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.22 E-value=4e-12 Score=125.22 Aligned_cols=72 Identities=25% Similarity=0.265 Sum_probs=67.4
Q ss_pred CccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHHhhhCCCC
Q 001059 6 LDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEIVPLG 80 (1170)
Q Consensus 6 ~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l~~~~~~~ 80 (1170)
..+.+.|.|+||++||+++|.+.|. .++|++.++..|.+.|.+++++|+ ||+|||+||+.+||||++++..-
T Consensus 54 ~~~~~~L~~~~p~~YP~~~P~i~l~-~~~L~~~~~~~l~~~L~~~~~e~~--G~~mif~lv~~lqe~l~~~~~~p 125 (128)
T 2ebk_A 54 ADIPLELVFHLPVNYPSCLPGISIN-SEQLTRAQCVTVKEKLLEQAESLL--SEPMVHELVLWIQQNLRHILSQP 125 (128)
T ss_dssp CCCEEEEEEEECSSTTSSCCCCCCC-CSSSCHHHHHHHHHHHHHHHHHTT--TSCHHHHHHHHHTTSHHHHHCCC
T ss_pred CCeEEEEEEECCCCCCCCCCeEEEE-hhhCCHHHHHHHHHHHHHHHHHhC--CcchHHHHHHHHHHHHHHHHhCc
Confidence 3579999999999999999999998 589999999999999999999999 99999999999999999987643
No 296
>3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens}
Probab=99.14 E-value=1.1e-10 Score=138.40 Aligned_cols=143 Identities=10% Similarity=0.086 Sum_probs=114.1
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccC--------Cceeeec
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHG--------GDLLELS 780 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~--------G~~laLR 780 (1170)
..|+..|.|..+.+.+.+++.+++.+.++||++|.||.| .+ .++.+.+.++||++.|.+ ++.++|+
T Consensus 190 Gsgfy~l~p~GarL~raL~~f~~d~~~~~Gy~EV~~P~lv~~el~~~sG~l~~f~eemy~v~~~g~~~~~~~~~~~l~L~ 269 (522)
T 3vbb_A 190 GSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLI 269 (522)
T ss_dssp STTCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHSCCC-CCSCCCEEC------------CCEEEC
T ss_pred CcceEEEcCHHHHHHHHHHHHHHHHHHHcCCEEEECCcccchHHHhhcCCcccCcccceEeecCCccccccccCcceeEc
Confidence 468889999999999999999999999999999999999 22 344677889999998763 6789999
Q ss_pred CCCCHHHHHHHHh----CCCCceeEEEecCeEEcCCCC--------CCCCceeEeEEEEeCCCCc-ccH---HHHHHHHH
Q 001059 781 HELRLPFIRWAIS----NQKSSFKRYEISSVYRRAIGH--------SPPNRYLQGDFDIIGGASA-LTE---AEVLKVTM 844 (1170)
Q Consensus 781 PD~T~~iaR~~~~----~~~~P~r~~Y~g~VfR~e~~~--------~~~~ef~Q~GvEiiG~~~~-~aD---aEvi~la~ 844 (1170)
|.-.+|++.++.. +...|+|+|++|+|||+|.+. -|.++|+|..+.+|..++. .++ .+++.++.
T Consensus 270 PTaE~~l~~l~~~ei~s~~dLPlr~~~~s~cFR~Eags~GrdtrGL~RvhQF~kvE~~~f~~pe~e~s~~e~e~ml~~~e 349 (522)
T 3vbb_A 270 ATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAE 349 (522)
T ss_dssp SSTHHHHHTTSTTCEECTTTCCEEEEEEEEEECSCCCC----CCCSSSCSEEEEEEEEEEECSSTTHHHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHhhhecccccCCeeEEEecccccCCCCcCCccCCCcceeeeeEEEEEEEEeCCChHHHHHHHHHHHHHHH
Confidence 9888999877654 345699999999999998753 2445699999999987754 233 58899999
Q ss_pred HHHHHcCCCcceEEE
Q 001059 845 DIVTRFFHAESCDIH 859 (1170)
Q Consensus 845 ~~l~~lgi~~~~~i~ 859 (1170)
++|+.||+. |.+.
T Consensus 350 ~il~~LGLp--yrvv 362 (522)
T 3vbb_A 350 EFYQSLGIP--YHIV 362 (522)
T ss_dssp HHHHHTTCC--EEEE
T ss_pred HHHHHcCCc--eEEE
Confidence 999999996 5543
No 297
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A*
Probab=99.12 E-value=2.7e-10 Score=127.95 Aligned_cols=122 Identities=11% Similarity=0.133 Sum_probs=98.2
Q ss_pred hhhHHhHHHHHHHHcCCccccccceeccC--------CCcccccceEEEeccCCceeeecCCCCHHHHHHHHhC---CCC
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG--------DCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN---QKS 797 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~--------~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~---~~~ 797 (1170)
+..+.+.+++.|..+||.||.||+|+... ......+++|.| ++..+|||++++++.+.++.+ ...
T Consensus 79 ~~~i~~~ir~~l~~~Gf~EV~Tp~l~~~~~~~~~~~~~~~p~~~~~~~~----~~~~~LR~slsp~L~~~l~~n~~~~~~ 154 (290)
T 3qtc_A 79 LGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRV----DKNFCLRPMLTPNLYNYLRKLDRALPD 154 (290)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCCSEEETHHHHHTTCCTTSSGGGGCCEE----TTTEEECSCSHHHHHHHHHHHTTTSCS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCceeeHHHHHhcCCCcCCchhhhheee----CCCeeEcccChHHHHHHHHHhhccCCC
Confidence 46899999999999999999999992111 122245568877 367999999999999988764 356
Q ss_pred ceeEEEecCeEEcCCCC-CCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEE
Q 001059 798 SFKRYEISSVYRRAIGH-SPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 858 (1170)
Q Consensus 798 P~r~~Y~g~VfR~e~~~-~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i 858 (1170)
|.|+|++|+|||+|..+ .+..||+|++++++|... .++|+..++.++++.+|++ +.+
T Consensus 155 p~rlfeiG~vFR~E~~~~~~~~Ef~ql~~~~~g~~~--~f~elkg~le~ll~~lGl~--~~~ 212 (290)
T 3qtc_A 155 PIKIFEIGPCYRKESDGKEHLEEFTMLVFWQMGSGC--TRENLESIITDFLNHLGID--FKI 212 (290)
T ss_dssp SEEEEEEEEEECCCSCSSSCCSEEEEEEEEEESTTC--CHHHHHHHHHHHHHHHTCC--CEE
T ss_pred CeEEEEEcCEEecCCCCCcCcchheEEEEEEEcCCh--HHHHHHHHHHHHHHHcCCC--cEE
Confidence 99999999999998655 345689999999999763 5789999999999999983 655
No 298
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=99.06 E-value=3e-10 Score=135.18 Aligned_cols=142 Identities=13% Similarity=0.112 Sum_probs=116.1
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCccccc-ceEEEeccCCceeeecCCCCHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKR-NTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~-~my~f~D~~G~~laLRPD~T~~i 787 (1170)
..|+..|.|..+.+.+.|++.+++.+.++||++|.||.| .+. +..+.+.+ +||++.|.+++.++|||.-++++
T Consensus 208 G~g~~~l~p~GarL~~aL~~~~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~~~~f~e~emf~v~~~~~~~l~L~PTaE~~~ 287 (501)
T 1wle_A 208 GHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGL 287 (501)
T ss_dssp CTTCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHHHTCCSSSSSCSSCBBCTTTSSSCEECSSHHHHH
T ss_pred cCceEEEcChHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHHhhcCCCccCccccEEEecCCCCeEEECCcCcHHH
Confidence 467888899999999999999999999999999999999 222 23444555 99999887788999999888899
Q ss_pred HHHHHh----CCCCceeEEEecCeEEcCCC----C---CCCCceeEeEEEEeCCCC-c---ccHHHHHHHHHHHHHHcCC
Q 001059 788 IRWAIS----NQKSSFKRYEISSVYRRAIG----H---SPPNRYLQGDFDIIGGAS-A---LTEAEVLKVTMDIVTRFFH 852 (1170)
Q Consensus 788 aR~~~~----~~~~P~r~~Y~g~VfR~e~~----~---~~~~ef~Q~GvEiiG~~~-~---~aDaEvi~la~~~l~~lgi 852 (1170)
+.++.. +...|+|+|++|++||+|.. . -|.++|.|..+.+|..+. . ..-.+++.++.++|+.||+
T Consensus 288 ~~l~~~~i~s~~~LPlrl~~~s~~FR~Ea~~G~d~~GL~RvhqF~kvE~~~f~~pe~e~s~~~~e~~l~~~~~il~~LgL 367 (501)
T 1wle_A 288 AGYFMDHSVAFRDLPIRMVCSSTCYRAETDTGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTELGL 367 (501)
T ss_dssp HHHHTTEEEEGGGCSEEEEEEEEEECCCCSCC--CCSSSSCSEEEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhhccCCcccCCeeEEeccCcccCCCCCCCCCcCceeeeeeeeeeEEEEeCCcHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 888765 34579999999999999864 2 234569999999999874 2 2334889999999999999
Q ss_pred CcceEE
Q 001059 853 AESCDI 858 (1170)
Q Consensus 853 ~~~~~i 858 (1170)
. |.+
T Consensus 368 p--yrv 371 (501)
T 1wle_A 368 H--FRV 371 (501)
T ss_dssp C--EEE
T ss_pred c--EEE
Confidence 6 664
No 299
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.02 E-value=7.8e-10 Score=121.72 Aligned_cols=141 Identities=14% Similarity=0.122 Sum_probs=107.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~ 430 (1170)
..+..|++...++.|+++.||++... |..+++|+.+..... ....+.+|+.+|+.+. |.++.++++++..
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~--~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~----- 81 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFERH----- 81 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEEE-----
T ss_pred HHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCC--CHHHHHHHHHHHHHHhcCCCCCeEEEEEec-----
Confidence 34678999999999999999998754 789999998642211 1235889999999984 6677788866521
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|+||||++| +|.+.+. +......++.+++.+|+.|
T Consensus 82 -----------------------------------~~~~~lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~L 121 (263)
T 3tm0_A 82 -----------------------------------DGWSNLLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLF 121 (263)
T ss_dssp -----------------------------------TTEEEEEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHH
Confidence 3457999999987 7766531 1223346788999999999
Q ss_pred Hh-----------------------------------------------------------CCccccCCCCCceeecCCC
Q 001059 510 HG-----------------------------------------------------------QGIIHRDLTPNNIFFDARN 530 (1170)
Q Consensus 510 Hs-----------------------------------------------------------~gIiHrDLKp~NILi~~~~ 530 (1170)
|+ ..++|+|++|.|||++++.
T Consensus 122 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~ 201 (263)
T 3tm0_A 122 HSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGK 201 (263)
T ss_dssp HHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTE
T ss_pred hCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCc
Confidence 98 4589999999999998766
Q ss_pred CEEEeecCcch
Q 001059 531 DIKIGDFGLAK 541 (1170)
Q Consensus 531 ~vKL~DFGlA~ 541 (1170)
.+.|+||+.+.
T Consensus 202 ~~~lIDwe~a~ 212 (263)
T 3tm0_A 202 VSGFIDLGRSG 212 (263)
T ss_dssp EEEECCCTTCE
T ss_pred EEEEEEchhcc
Confidence 67799999875
No 300
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=99.01 E-value=6.4e-10 Score=131.16 Aligned_cols=142 Identities=10% Similarity=0.087 Sum_probs=115.1
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
..|+..|.|..+.+.+.+++.+++.+.++||++|.||.| .-.++.+.+.++||++.+. ++.++|+|.-.+|++
T Consensus 197 Gsgf~~~~p~GarL~~aL~~f~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~~~~f~e~mf~v~~~-~~~~~L~PTaE~~l~ 275 (484)
T 3lss_A 197 GGRSYVLKGGLVQLQVALVSYSLDFLVKRGYTPFYPPFFLNRDVMGEVAQLSQFDEELYQVSGD-GDKKYLIATSEMPIA 275 (484)
T ss_dssp CTTCCEEEHHHHHHHHHHHHHHHHHHHTTTCEEEECCSEEEHHHHHHHSCHHHHHHTCCEEESS-SSCEEECSSTHHHHH
T ss_pred CceEEEECCHHHHHHHHHHHHHHHHHHHcCCEEEecCccccHHHHHhcCCcccccccceEeecC-CcceEEeccCcHHHH
Confidence 456778889999999999999999999999999999999 2223456678899999875 788999998889988
Q ss_pred HHHHh----CCCCceeEEEecCeEEcCCCC-C-------CCCceeEeEEEEeCCCCc--ccH--HHHHHHHHHHHHHcCC
Q 001059 789 RWAIS----NQKSSFKRYEISSVYRRAIGH-S-------PPNRYLQGDFDIIGGASA--LTE--AEVLKVTMDIVTRFFH 852 (1170)
Q Consensus 789 R~~~~----~~~~P~r~~Y~g~VfR~e~~~-~-------~~~ef~Q~GvEiiG~~~~--~aD--aEvi~la~~~l~~lgi 852 (1170)
-++.. +...|+|+|.++++||+|... + |.++|+|.++.+|+.++. ..+ .+++.++.++|+.||+
T Consensus 276 ~l~~~~i~sy~dLPlr~~~~s~cFR~Eags~Grdt~GL~RvrqF~kvE~~~f~~pe~~~s~~e~e~~~~~~e~il~~LGL 355 (484)
T 3lss_A 276 AYHRGRWFTELKEPLKYAGMSTCFRKEAGAHGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGL 355 (484)
T ss_dssp HHTTTCEESCCSSCEEEEEEEEEECCCTTCSSSCCSTTSSCSEEEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhccccchhhCCeeEEeecCccCCCCCcCCcccCCcceeeeEEEEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHcCC
Confidence 76654 345699999999999998732 2 445699999999998765 222 3788999999999999
Q ss_pred CcceEEE
Q 001059 853 AESCDIH 859 (1170)
Q Consensus 853 ~~~~~i~ 859 (1170)
. |.+.
T Consensus 356 p--yrvv 360 (484)
T 3lss_A 356 P--YRVV 360 (484)
T ss_dssp C--EEEE
T ss_pred c--EEEE
Confidence 6 5553
No 301
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=99.01 E-value=1.2e-09 Score=105.86 Aligned_cols=101 Identities=7% Similarity=0.029 Sum_probs=90.9
Q ss_pred CCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeC-CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcC
Q 001059 1061 NEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV-PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLD 1139 (1170)
Q Consensus 1061 ~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~-~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~ 1139 (1170)
...|.++.|++++ +....+|.+++++|++.|++|+++.. .+.+++++++.|...++||+++||++|.++++|+|+.+.
T Consensus 5 ~~~P~Qv~IlpVs-~~~~~YA~~V~~~L~~~GiRvevD~~r~~e~Lg~kIR~a~~~kvPy~lVVG~kE~e~~sVsVR~r~ 83 (130)
T 1v95_A 5 SSGPVDCSVIVVN-KQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMF 83 (130)
T ss_dssp CCCCCTEEEEESS-SGGGHHHHHHHHHHHTTTCCEEEEECTTSSCHHHHHHHHHHHTCSEEEEECHHHHHHTEEEEEECS
T ss_pred CCCCCeEEEEEeC-cchHHHHHHHHHHHHHCCCEEEEecCCCCCcHHHHHHHHHHcCCCEEEEEechHHhcCeeEEEecC
Confidence 3467899999997 78899999999999999999999874 256899999999999999999999999999999999998
Q ss_pred C--CcccccchHHHHHHHHHHHHhh
Q 001059 1140 V--KKEKEVQRESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1140 ~--~eq~~v~~~~l~~~l~~~l~~~ 1162 (1170)
. +++..+++++++..|...+..+
T Consensus 84 ~~~~e~~~m~lde~i~~l~~~~~~~ 108 (130)
T 1v95_A 84 GTPQEHRNMPQADAMVLVARNYERY 108 (130)
T ss_dssp SSCCEEEEEEHHHHHHHHHHHHHHH
T ss_pred CCCCccCccCHHHHHHHHHHHHHHH
Confidence 8 8889999999999997766544
No 302
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=98.94 E-value=8.4e-10 Score=111.86 Aligned_cols=73 Identities=23% Similarity=0.166 Sum_probs=64.5
Q ss_pred ccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHH-hhhhCCCeEEEeeHHHHHHHHhhhCCCCCC
Q 001059 7 DVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQAN-SNAREGRVMIFNLVEAAQEFLSEIVPLGQS 82 (1170)
Q Consensus 7 ~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~-enl~~gm~miftl~~~~~e~l~~~~~~~~~ 82 (1170)
.+.+.|.|+||++||+++|.+.|.... ++..+...|.+.|.+.++ +|+ ||+|||++|+.+||++.+++....+
T Consensus 72 ~~~l~L~v~lP~~YP~~~P~i~l~~~~-l~~~~~~~L~~~L~~~~~~~~~--G~~mif~lv~~lqe~l~~~~~~~~~ 145 (152)
T 2dax_A 72 MAMFSLACILPFKYPAVLPEITVRSVL-LSRSQQTQLNTDLTAFLQKHCH--GDVCILNATEWVREHASGYVSRDTS 145 (152)
T ss_dssp EEEEEEEEEECSSTTSSCCCCEEECTT-SCHHHHHHHHHHHHHHHHHSSC--SSCCSHHHHHHHHHHHHHHCCCCCC
T ss_pred CceEEEEEECCCCCCCCCCeEEEEccc-CCHHHHHHHHHHHHHHHHHhcC--CcchHHHHHHHHHHHHHHHHhcccc
Confidence 468999999999999999999999865 677778888887887775 699 9999999999999999999877655
No 303
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=98.94 E-value=1.5e-09 Score=127.91 Aligned_cols=142 Identities=11% Similarity=0.097 Sum_probs=114.8
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
..|+..|.|..+.+.+.+++.+++.+.++||++|.||.| .. .++.+.+.++||++.|. ++.++|+|.+.+|++
T Consensus 174 Gsg~~~l~p~GarL~~aL~~~~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~l~~f~eemf~v~~~-~~~~~LipTaE~pl~ 252 (485)
T 3qne_A 174 GHRGYFLRNYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDG-EDEKYLIATSEQPIS 252 (485)
T ss_dssp CTTCCEECTHHHHHHHHHHHHHHHHHHTTTCEEEECCSEEEHHHHHHHSCHHHHTTTCCEEEET-TEEEEECSSTHHHHH
T ss_pred cceeEEEecHHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHhhcCCccccccceEEEeCC-CCeEEEeccccHHHH
Confidence 458888999999999999999999999999999999999 22 23356678899999875 678999999999999
Q ss_pred HHHHhC------CCCceeEEEecCeEEcCCCC--------CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCC
Q 001059 789 RWAISN------QKSSFKRYEISSVYRRAIGH--------SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFH 852 (1170)
Q Consensus 789 R~~~~~------~~~P~r~~Y~g~VfR~e~~~--------~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi 852 (1170)
.++... ...|+|+|++++|||+|... -|.++|+|.+..+|..++...+ .+++.++.++++.||+
T Consensus 253 ~l~~~ei~~S~y~dLPlr~~~~s~cfR~Eag~~Grdt~GL~RvhqF~kvE~~~f~~pe~s~~e~e~ml~~~e~il~~LgL 332 (485)
T 3qne_A 253 AYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGL 332 (485)
T ss_dssp HHTTTCEESSHHHHCCEEEEEEEEEECSCCC-----CCSSSSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhccccccchhcCCeeEEEecccccCCCCCCCccCCCceeeeeeeeeeEEEEeCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 876542 23599999999999998643 2445699999999986643221 4788999999999999
Q ss_pred CcceEEE
Q 001059 853 AESCDIH 859 (1170)
Q Consensus 853 ~~~~~i~ 859 (1170)
. |.+.
T Consensus 333 p--yrvv 337 (485)
T 3qne_A 333 P--YRVV 337 (485)
T ss_dssp C--EEEE
T ss_pred c--EEEE
Confidence 6 5543
No 304
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=98.88 E-value=1.2e-09 Score=110.89 Aligned_cols=73 Identities=16% Similarity=0.063 Sum_probs=67.4
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhh-hhCCCeEEEeeHHHHHHHHhhhCCCCCCC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSN-AREGRVMIFNLVEAAQEFLSEIVPLGQSN 83 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~en-l~~gm~miftl~~~~~e~l~~~~~~~~~~ 83 (1170)
..+.|+|+||++||+++|.+.|... +++..+...|.+.|.+.+++| + ||+|||++|+.+||++.+++....+.
T Consensus 75 ~~i~L~v~lP~~YP~~~P~i~l~~~-~l~~~~~~~L~~~L~~~l~~~~l--G~~mif~lve~lqe~~~~~l~~~~~~ 148 (154)
T 2daw_A 75 VKIDLQVTMPHSYPYLALQLFGRSS-ELDRHQQLLLNKGLTSYIGTFDP--GELCVCAAIQWLQDNSASYFLNRKLV 148 (154)
T ss_dssp EEEEEEEEECSSTTSSCCEEEEECS-SSCHHHHHHHHHHHHHHHTTSCT--TSCSHHHHHHHHHHTTHHHHCCCCCC
T ss_pred ceEEEEEEcCCCCCCCCCcEEEEeC-CCCHHHHHHHHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHHHHhCcCCC
Confidence 3789999999999999999999986 899999999999999999887 8 99999999999999999998887765
No 305
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A
Probab=98.88 E-value=4.8e-09 Score=126.19 Aligned_cols=140 Identities=9% Similarity=0.097 Sum_probs=113.6
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
..|+..|.|..+.+.+.+++.+++.+.++||++|.||.| .-.+..+.+.++||++.| +.++|+|.-.++++
T Consensus 264 G~g~~~~~p~Ga~l~~aL~~~~~~~~~~~Gy~ev~~P~lv~~~l~~~sG~~~~f~e~mf~~~~---~~~~L~PT~E~~~~ 340 (536)
T 3err_A 264 GSRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAE---TDLYLTGTAEVVLN 340 (536)
T ss_dssp CSSCCCEEHHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGCCEETT---TTEEECSSTHHHHH
T ss_pred CCceeEEcCHHHHHHHHHHHHHHHHHHHcCCEEEeccccccHHHHHhcCCcccChhhceEecC---CCEEEccCCcHHHH
Confidence 467889999999999999999999999999999999999 223446677899999976 68999998888887
Q ss_pred HHHHh----CCCCceeEEEecCeEEcCCCC--------CCCCceeEeEEEEeCCCC-cccH---HHHHHHHHHHHHHcCC
Q 001059 789 RWAIS----NQKSSFKRYEISSVYRRAIGH--------SPPNRYLQGDFDIIGGAS-ALTE---AEVLKVTMDIVTRFFH 852 (1170)
Q Consensus 789 R~~~~----~~~~P~r~~Y~g~VfR~e~~~--------~~~~ef~Q~GvEiiG~~~-~~aD---aEvi~la~~~l~~lgi 852 (1170)
-++.. ++..|+|+|.+|++||+|... -|.++|+|.+..+|..++ ..++ .+++.++.++++.||+
T Consensus 341 ~l~~~~i~s~~~LPlr~~~~~~~fR~E~gs~Gr~~~GL~RvrqF~k~e~~~f~~pe~e~s~~~~e~~~~~~~~i~~~LgL 420 (536)
T 3err_A 341 ALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLEL 420 (536)
T ss_dssp HHTTTCEEEGGGCSEEEEEEEEEECCCTTCTTSSCSTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhcccccHhhCCeeEEEecccccCCccccCCCCCCceeeeeeEEEEEEEEECCchHHHHHHHHHHHHHHHHHHHHcCC
Confidence 66544 335699999999999998632 244569999999999887 2223 3778889999999999
Q ss_pred CcceEEE
Q 001059 853 AESCDIH 859 (1170)
Q Consensus 853 ~~~~~i~ 859 (1170)
. |.+.
T Consensus 421 p--yrvv 425 (536)
T 3err_A 421 P--YRLV 425 (536)
T ss_dssp C--EEEE
T ss_pred c--EEEE
Confidence 6 5543
No 306
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.87 E-value=7.4e-09 Score=113.05 Aligned_cols=136 Identities=16% Similarity=0.072 Sum_probs=95.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCc--eeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV--VRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnI--V~l~~~~~e~~~~~ 430 (1170)
+..+|.+....+.|..+.||++.. .+|..+++|+.... ....+.+|+.+++.+.+.++ .+++++...
T Consensus 18 ~~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~----- 86 (264)
T 1nd4_A 18 RLFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTE----- 86 (264)
T ss_dssp TTTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-----
T ss_pred hcCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-----
Confidence 345666655445666799999865 46788999987532 12357789999999965554 457655421
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|++|||++| +|. .. ..+ ...++.+++..|..|
T Consensus 87 -----------------------------------~~~~~~v~e~i~G~~l~--~~---~~~---~~~~~~~l~~~l~~l 123 (264)
T 1nd4_A 87 -----------------------------------AGRDWLLLGEVPGQDLL--SS---HLA---PAEKVSIMADAMRRL 123 (264)
T ss_dssp -----------------------------------SSCEEEEEECCSSEETT--TS---CCC---HHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCCEEEEEecCCcccC--cC---cCC---HhHHHHHHHHHHHHH
Confidence 2346899999987 553 21 122 225667788888888
Q ss_pred HhCC----------------------------------------------------------ccccCCCCCceeecCCCC
Q 001059 510 HGQG----------------------------------------------------------IIHRDLTPNNIFFDARND 531 (1170)
Q Consensus 510 Hs~g----------------------------------------------------------IiHrDLKp~NILi~~~~~ 531 (1170)
|+.. ++|+|++|.|||++.++.
T Consensus 124 h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~ 203 (264)
T 1nd4_A 124 HTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRF 203 (264)
T ss_dssp TTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEE
T ss_pred hCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcE
Confidence 8643 999999999999987766
Q ss_pred EEEeecCcchh
Q 001059 532 IKIGDFGLAKF 542 (1170)
Q Consensus 532 vKL~DFGlA~~ 542 (1170)
+.|+|||.+..
T Consensus 204 ~~liD~~~a~~ 214 (264)
T 1nd4_A 204 SGFIDCGRLGV 214 (264)
T ss_dssp EEECCCTTCEE
T ss_pred EEEEcchhccc
Confidence 77999999863
No 307
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A
Probab=98.73 E-value=2.4e-08 Score=117.68 Aligned_cols=114 Identities=11% Similarity=0.053 Sum_probs=90.8
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeec--CCCCHHHHHHHHhCCCCceeE
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 801 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~~~~~~~P~r~ 801 (1170)
.....+..+.+.+++.|..+||.+|+||++.... .+-..++|.+ +..|+.+.|| |+++... ++. .+.|+
T Consensus 133 ~~~~~rs~i~~~ir~~f~~~gF~eVeTP~l~~~~--~e~~~~~f~~-~~~~~~~~Lr~Spel~~~~--~~~----g~~rv 203 (434)
T 1x54_A 133 AIMKVKETLIMAAREWLLKDGWHEVFPPILVTGA--VEGGATLFKL-KYFDKYAYLSQSAQLYLEA--AIF----GLEKV 203 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESCC--SSCGGGCCEE-EETTEEEEECSCSHHHHHH--HHH----HHSEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEeCcEEEeec--CCCCceeEEE-eecCCcEEeccChHHHHHH--Hhc----Cccce
Confidence 3467888999999999999999999999985332 2224578876 5678899999 8776543 222 27899
Q ss_pred EEecCeEEcCCCCC-CCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 802 YEISSVYRRAIGHS-PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~-~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
||+|+|||+|.++. +.+ ||+|+++|+.|.+ +.|++.++.++++.+
T Consensus 204 f~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~----~~dlm~~~e~ll~~l 250 (434)
T 1x54_A 204 WSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD----LWDIMKVEEELVSYM 250 (434)
T ss_dssp EEEEEEECCCCCCCSSCCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred EEEecceecCCCCCcccccEEEEeeEEEcCCC----HHHHHHHHHHHHHHH
Confidence 99999999998876 444 8999999999974 788999998888774
No 308
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.73 E-value=2.4e-08 Score=115.30 Aligned_cols=142 Identities=17% Similarity=0.273 Sum_probs=101.1
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEe--cCCCChhhHHHHHHHHHHHHhcc--CCCceeEEEEEeecCccccCCC
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR--LKDKSLPVNDRILREVATLSRLQ--HQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~--~~~~~~~~~~~~~~Ev~iL~~l~--HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.++.|+.|.++.||++... +..+++|+.. .... ......+.+|+.+++.+. +..+++++..+.+..
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~------- 111 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES------- 111 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT-------
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC-------
Confidence 3678999999999998764 5688899765 2211 112346888999999997 455777876652210
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-- 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs-- 511 (1170)
.....|+||||++| .+.+. ....++......++.+++..|+.||+
T Consensus 112 ------------------------------~~g~~~~vme~v~G~~l~~~--~~~~l~~~~~~~~~~~l~~~La~LH~~~ 159 (359)
T 3dxp_A 112 ------------------------------VIGRAFYIMEFVSGRVLWDQ--SLPGMSPAERTAIYDEMNRVIAAMHTVD 159 (359)
T ss_dssp ------------------------------TTSSCEEEEECCCCBCCCCT--TCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ------------------------------ccCCeEEEEEecCCeecCCC--ccccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 01235899999987 44321 12346788888999999999999997
Q ss_pred --------------------------------------------------------CCccccCCCCCceeecCCCC--EE
Q 001059 512 --------------------------------------------------------QGIIHRDLTPNNIFFDARND--IK 533 (1170)
Q Consensus 512 --------------------------------------------------------~gIiHrDLKp~NILi~~~~~--vK 533 (1170)
..++|+|++|.|||++.++. +.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~ 239 (359)
T 3dxp_A 160 YQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLA 239 (359)
T ss_dssp TTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEE
T ss_pred chhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEE
Confidence 35899999999999997753 68
Q ss_pred EeecCcchh
Q 001059 534 IGDFGLAKF 542 (1170)
Q Consensus 534 L~DFGlA~~ 542 (1170)
|.||+.+..
T Consensus 240 viDwe~a~~ 248 (359)
T 3dxp_A 240 VLDWELSTL 248 (359)
T ss_dssp ECCCTTCEE
T ss_pred EECcccccc
Confidence 999999874
No 309
>1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii}
Probab=98.66 E-value=4.9e-08 Score=114.83 Aligned_cols=114 Identities=8% Similarity=0.051 Sum_probs=89.8
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeec--CCCCHHHHHHHHhCCCCceeE
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 801 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~~~~~~~P~r~ 801 (1170)
.-.+.+..+.+.+++.|..+||.+|+||++.... .+-..++|.+ +..|+.+.|| |+++ ..| ++. .+.|+
T Consensus 132 ~~~~~rs~i~~~ir~ff~~~gF~eV~TP~l~~~~--~e~~~~~f~~-~~~~~~~~L~~Spql~--~~~-~~~---g~~rv 202 (429)
T 1wyd_A 132 AVIKIQSLALKAFRETLYKEGFIEIFTPKIIASA--TEGGAQLFPV-IYFGKEAFLAQSPQLY--KEL-MAG---VVERV 202 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSC--SSTTCCCCEE-EETTEEEEECSCCHHH--HHH-HHH---HHSEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCEEEECCEEEeeC--CCCCceeEEE-ecCCceEEecCCcHHH--HHH-HHh---CcCce
Confidence 3467788999999999999999999999985332 2224578877 5668899999 7776 334 333 27799
Q ss_pred EEecCeEEcCCCCC-CCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 802 YEISSVYRRAIGHS-PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~-~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
|++|+|||+|.++. +.+ ||+|+++|+.|.+ ..|++.++.++++.+
T Consensus 203 f~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~----~~dlm~~~e~ll~~l 249 (429)
T 1wyd_A 203 FEVAPAWRAEESDTPFHLAEFISMDVEMAFAD----YNDVMQLLEKILHNI 249 (429)
T ss_dssp EEEEEEECCCCCCSSSCCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred EEEcccccccCCccccccceeeEeeeeecCCC----HHHHHHHHHHHHHHH
Confidence 99999999998876 444 8999999999974 688888888888764
No 310
>1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A*
Probab=98.60 E-value=2.8e-08 Score=116.58 Aligned_cols=115 Identities=12% Similarity=0.109 Sum_probs=64.5
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeec--CCCCHHHHHHHHhCCCCceeE
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 801 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~~~~~~~P~r~ 801 (1170)
...+.+..+.+.+++.|..+||.+|+||++..... +...++|.+ +..|+.+.|| |+++. +.++ .. .-|+
T Consensus 123 ~~~~~rs~i~~~ir~~f~~~gF~EV~TPil~~~~~--e~~~~~f~~-~~~g~~~~L~~Spel~~---~~l~-~g--~~rv 193 (422)
T 1n9w_A 123 APLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGA--EGGSGLFGV-DYFEKRAYLAQSPQLYK---QIMV-GV--FERV 193 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCC-------------------------------CHHHH---HHHH-HH--HSEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEeCC--CCCceeEEE-eeCCCcEEeeeCHHHHH---HHHh-hC--CCce
Confidence 34678889999999999999999999999853322 223467876 5667889999 88774 3333 22 5699
Q ss_pred EEecCeEEcCCCCC-CCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 802 YEISSVYRRAIGHS-PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~-~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
||+|+|||+|.++. +.+ ||+|+++|+.|.++ ..|++.++.++++.+
T Consensus 194 f~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~d---~~dlm~l~e~ll~~l 241 (422)
T 1n9w_A 194 YEVAPVWRMEEHHTSRHLNEYLSLDVEMGFIAD---EEDLMRLEEALLAEM 241 (422)
T ss_dssp EEEEEC-------------CCEEEEEEEESCSS---HHHHHHHHHHHHHHH
T ss_pred eEEeCceECCCCCCCcccceeEEeeeeeeCCCC---HHHHHHHHHHHHHHH
Confidence 99999999999876 444 89999999999744 678888888888764
No 311
>1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A*
Probab=98.44 E-value=5.6e-07 Score=107.48 Aligned_cols=114 Identities=11% Similarity=0.072 Sum_probs=85.5
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeec--CCCCHHHHHHHHhCCCCceeE
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 801 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~~~~~~~P~r~ 801 (1170)
.-.+++..|...+++.|..+||.+|+||++.....++ ..++|.+. ..|+.+.|| |++-. -+.++ ..+-|+
T Consensus 176 ~~~~~rs~i~~~ir~~~~~~gF~EV~TPil~~~~~~~--ga~~f~~~-~~~~~~~L~~Spql~~--k~l~~---~g~~rv 247 (487)
T 1eov_A 176 AIFRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEG--GSSVFEVT-YFKGKAYLAQSPQFNK--QQLIV---ADFERV 247 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCSSS--SSCCCEEE-ETTEEEEECSCTHHHH--HHHHH---TTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEeCCEEEEecCCC--Ccccceec-cCCccEEcccChHHHH--HHHHh---cCCCce
Confidence 3467888999999999999999999999985432221 23578764 468899999 87743 23333 235699
Q ss_pred EEecCeEEcCCCCCCC-C-ceeEeEEEE-eCCCCcccHHHHHHHHHHHHHH
Q 001059 802 YEISSVYRRAIGHSPP-N-RYLQGDFDI-IGGASALTEAEVLKVTMDIVTR 849 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~-~-ef~Q~GvEi-iG~~~~~aDaEvi~la~~~l~~ 849 (1170)
||+|+|||+|.++.+| + ||+|+++|+ ||.+. .|++.++-++++.
T Consensus 248 y~ig~~FR~E~~~~~Rh~pEFt~le~e~af~~~~----~dlm~l~E~ll~~ 294 (487)
T 1eov_A 248 YEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHY----HEVLDTLSELFVF 294 (487)
T ss_dssp EEEEEEECCCCCCCTTCCSEEEEEEEEEECSSCT----HHHHHHHHHHHHH
T ss_pred EEEeccEecCCCCCCccchhhhhhhhhhhhhcCH----HHHHHHHHHHHHH
Confidence 9999999999987544 4 899999998 77533 5677777777765
No 312
>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A*
Probab=98.42 E-value=4.4e-07 Score=101.76 Aligned_cols=144 Identities=13% Similarity=0.126 Sum_probs=114.3
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccC---------------
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHG--------------- 773 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~--------------- 773 (1170)
..|+.-+.+..+.+.+.+++.+++ ...+||++|.||.+ .+. +..+.+.++||....-.
T Consensus 53 ~~g~y~~~g~~a~L~~aLe~~~~~-~~~~Gy~ev~~P~lv~~~~~e~SGhl~~F~e~mf~v~~~~~d~~e~~~ll~~~~~ 131 (346)
T 3mf2_A 53 SDGVYARTALYESIVERLAALITS-HREAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLHGTEREINAAVSRFDA 131 (346)
T ss_dssp ETTEEEEEHHHHHHHHHHHHHHHH-TCCTTCEEEECCSEEEHHHHHHTTHHHHCGGGCEEEEEECSCHHHHHHHHHHHHT
T ss_pred CCceEEecchHHHHHHHHHHHHHh-hHhcCCeEEECCCccCHHHHHhcCCcccChhhcceeecccccchhhhhhhhhhcc
Confidence 356777788899999999999999 88999999999999 222 33566788999864322
Q ss_pred ---------CceeeecCCCCHHHHHHHHhC---CCCceeEEEecCeEEcCCCC--CCCCceeEeEEEEeCCCCcccH--H
Q 001059 774 ---------GDLLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAIGH--SPPNRYLQGDFDIIGGASALTE--A 837 (1170)
Q Consensus 774 ---------G~~laLRPD~T~~iaR~~~~~---~~~P~r~~Y~g~VfR~e~~~--~~~~ef~Q~GvEiiG~~~~~aD--a 837 (1170)
+..++|.|.-.+|+.-++... ...|+|+.-.|+|||+|... .|.++|+|..+-+||.++...+ .
T Consensus 132 ~~~~~~~l~~~d~~LiPtacvpl~~~~~~eg~i~~~plr~~~~g~CFR~EaS~GL~RvhqF~kvE~v~~~tpEqs~~e~e 211 (346)
T 3mf2_A 132 GGDWTTSLSPADLVLSPAACYPVYPIAASRGPLPKGGLRFDVAADCFRREPSKHLDRLQSFRMREYVCIGTPDDVSDFRE 211 (346)
T ss_dssp TSCGGGGEEEEEEEECSSSSTTHHHHHHTTCSCCTTCEEEEEEEEEECCCCCSSTTSCSEEEEEEEEEEESHHHHHHHHH
T ss_pred ccccccccCCCCEEEcccccHHHHHHHccCCcccccCeEEEEECCccCCcCCCCCeeeeeeEEEEEEEEeCHHHHHHHHH
Confidence 347999999999999888742 24599999999999998743 2444699999999997655333 4
Q ss_pred HHHHHHHHHHHHcCCCcceEEEeC
Q 001059 838 EVLKVTMDIVTRFFHAESCDIHLN 861 (1170)
Q Consensus 838 Evi~la~~~l~~lgi~~~~~i~lg 861 (1170)
+++.++.++|+.||+. +.+.+.
T Consensus 212 ~l~~~ae~il~~LgLp--yrv~~~ 233 (346)
T 3mf2_A 212 RWMVRAQAIARDLGLT--FRVDYA 233 (346)
T ss_dssp HHHHHHHHHHHHTTCC--CEEEEC
T ss_pred HHHHHHHHHHHHCCCC--EEEEEc
Confidence 8899999999999995 777664
No 313
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.33 E-value=5.7e-07 Score=101.26 Aligned_cols=134 Identities=17% Similarity=0.215 Sum_probs=93.3
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCc--eeEEEEEeecCccccCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHV--VRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnI--V~l~~~~~e~~~~~~~~~~~~ 437 (1170)
+.++.|.+..||++. ..+++|+... ......+.+|+.+|+.+. +..+ .+++......
T Consensus 26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~----------- 85 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN-----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS----------- 85 (304)
T ss_dssp CEEEECSSEEEEEST-----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC-----------
T ss_pred EecCCCCcceEEEEC-----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC-----------
Confidence 468999999999763 4588998542 234567889999999883 3332 3333221000
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-----
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG----- 511 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs----- 511 (1170)
......|+||++++| .+..... ..++.++...++.+++..|+.||+
T Consensus 86 --------------------------~~~~~~~~vm~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~ 137 (304)
T 3sg8_A 86 --------------------------ETYQMSFAGFTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISG 137 (304)
T ss_dssp --------------------------SSCSCSCEEEECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred --------------------------CCCCcceEEEcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 001233789999987 5543222 346777778888888888888885
Q ss_pred -----------------------------------------------------CCccccCCCCCceeecC--CCCEEEee
Q 001059 512 -----------------------------------------------------QGIIHRDLTPNNIFFDA--RNDIKIGD 536 (1170)
Q Consensus 512 -----------------------------------------------------~gIiHrDLKp~NILi~~--~~~vKL~D 536 (1170)
..++|+|++|.|||++. ...+.|.|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD 217 (304)
T 3sg8_A 138 FKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIID 217 (304)
T ss_dssp SCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECC
T ss_pred CCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEe
Confidence 13799999999999998 45688999
Q ss_pred cCcchh
Q 001059 537 FGLAKF 542 (1170)
Q Consensus 537 FGlA~~ 542 (1170)
|+.+..
T Consensus 218 ~~~~~~ 223 (304)
T 3sg8_A 218 FGDAAI 223 (304)
T ss_dssp CTTCEE
T ss_pred CCCCcc
Confidence 999875
No 314
>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A*
Probab=98.18 E-value=7.2e-06 Score=97.91 Aligned_cols=115 Identities=14% Similarity=0.134 Sum_probs=85.2
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEe-ccCCceeeecCCCCHHHH--HHHHhCCCCceeE
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFKR 801 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~~~~~~~P~r~ 801 (1170)
..+++..|...+++.|..+||.+|+||++.....|. ..++|.+. +..|+.+.|| ..+++. |.++ ...-|+
T Consensus 173 ~~r~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~~Ga--~a~~F~~~~~~~~~~~yLr--~SpqLylk~l~v---~G~~rV 245 (493)
T 3a74_A 173 TFITRSLIIQSMRRYLDSHGYLEVETPMMHAVAGGA--AARPFITHHNALDMTLYMR--IAIELHLKRLIV---GGLEKV 245 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCCSS--SSCCCEEEETTTTEEEEEC--SCSHHHHHHHHH---TTCCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEECCeEEecCCCC--cccceEecccCCCceeEEe--cCHHHHHHHHhh---cccCce
Confidence 467788999999999999999999999995332222 34678775 6678999999 333333 3333 235699
Q ss_pred EEecCeEEcCCCCCCCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 802 YEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
|++|++||+|..+.++. ||+|+++|..+.+ ..+++.++-++++.+
T Consensus 246 yeig~~FR~E~~~~rH~pEFT~lE~e~af~d----~~dlm~l~E~ll~~l 291 (493)
T 3a74_A 246 YEIGRVFRNEGISTRHNPEFTMLELYEAYAD----FRDIMKLTENLIAHI 291 (493)
T ss_dssp EEEEEEECCCCCBTTBCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred EEECccccCCCCCcccCCceeEEEEEecCCC----HHHHHHHHHHHHHHH
Confidence 99999999988765444 7999999999864 556777766666554
No 315
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.17 E-value=6.2e-06 Score=93.57 Aligned_cols=130 Identities=21% Similarity=0.267 Sum_probs=93.4
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC---C-CceeEEEEEeecCccccCC
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH---Q-HVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H---p-nIV~l~~~~~e~~~~~~~~ 433 (1170)
..++.++.|....||++ |..+++|+.. .......+.+|..+|+.+.+ + .+.++++.
T Consensus 40 ~~v~~l~~G~~n~vy~v-----g~~~vlR~~~----~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----------- 99 (320)
T 3r70_A 40 NELRYLSSGDDSDTFLC-----NEQYVVKVPK----RDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----------- 99 (320)
T ss_dssp SCEEEEEECSSEEEEEE-----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-----------
T ss_pred EEEEeCCCCCCceEEEE-----CCEEEEEeCC----cHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec-----------
Confidence 34678999999999987 6678999763 22224568899999999866 1 12333321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...|++|||++| ++.... ...++..+...++.+++..|+.||+.
T Consensus 100 ---------------------------------~~~~lvme~i~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~ 144 (320)
T 3r70_A 100 ---------------------------------SDRFNIMKYIKGERITYEQ--YHKLSEKEKDALAYDEATFLKELHSI 144 (320)
T ss_dssp ---------------------------------CSSCEEEECCCCBCCCHHH--HTTSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred ---------------------------------CCcEEEEeecCCccccccc--cccCCHHHHHHHHHHHHHHHHHHhCC
Confidence 112799999987 554322 23466777777788888888888842
Q ss_pred ---------------------------------------------------------------CccccCCCCCceeecCC
Q 001059 513 ---------------------------------------------------------------GIIHRDLTPNNIFFDAR 529 (1170)
Q Consensus 513 ---------------------------------------------------------------gIiHrDLKp~NILi~~~ 529 (1170)
.++|+|++|.|||++.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~ 224 (320)
T 3r70_A 145 EIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNN 224 (320)
T ss_dssp CCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETT
T ss_pred CcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECC
Confidence 23999999999999986
Q ss_pred CCEEEeecCcchh
Q 001059 530 NDIKIGDFGLAKF 542 (1170)
Q Consensus 530 ~~vKL~DFGlA~~ 542 (1170)
..+.|.||+.+..
T Consensus 225 ~~~~~iD~~~~~~ 237 (320)
T 3r70_A 225 RLFGVIDFGDFNV 237 (320)
T ss_dssp EEEEECCCTTCEE
T ss_pred ceEEEECCccccc
Confidence 6679999999864
No 316
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.92 E-value=9.5e-05 Score=83.30 Aligned_cols=133 Identities=18% Similarity=0.205 Sum_probs=87.1
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCC---CceeEEEEEeecCccccCCCCC
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ---HVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hp---nIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
++.++.|....||+. |..+++|+-. .......+.+|+.+|+.+.+. .+.+++.+...
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----------- 83 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----------- 83 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC-----------
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc-----------
Confidence 456889999999987 5678899742 223456789999999999753 23444433210
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--- 512 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~--- 512 (1170)
.....|++|+|++| .+....- ..++..+...++.++...|+.||+.
T Consensus 84 ----------------------------~~g~~~~v~e~i~G~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~~~ 133 (306)
T 3tdw_A 84 ----------------------------SDGNPFVGYRKVQGQILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFPVE 133 (306)
T ss_dssp ----------------------------TTSCEEEEEECCCSEECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred ----------------------------CCCceEEEEeccCCeECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 12335799999987 5544211 1234444444555555555555432
Q ss_pred ---------------------------------------------------------CccccCCCCCceeecC---CCC-
Q 001059 513 ---------------------------------------------------------GIIHRDLTPNNIFFDA---RND- 531 (1170)
Q Consensus 513 ---------------------------------------------------------gIiHrDLKp~NILi~~---~~~- 531 (1170)
.++|+|++|.|||++. ++.
T Consensus 134 ~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~ 213 (306)
T 3tdw_A 134 TAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPL 213 (306)
T ss_dssp HHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCE
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCce
Confidence 3599999999999987 455
Q ss_pred EEEeecCcchh
Q 001059 532 IKIGDFGLAKF 542 (1170)
Q Consensus 532 vKL~DFGlA~~ 542 (1170)
+.|.||+.+..
T Consensus 214 ~~~iD~~~a~~ 224 (306)
T 3tdw_A 214 TGIIDFGDAAI 224 (306)
T ss_dssp EEECCCTTCEE
T ss_pred EEEEehhhcCC
Confidence 48999998864
No 317
>1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A
Probab=97.90 E-value=5.1e-05 Score=90.74 Aligned_cols=115 Identities=9% Similarity=0.053 Sum_probs=82.1
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEe-ccCCceeeecCCCCHHHH--HHHHhCCCCceeE
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFKR 801 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~~~~~~~P~r~ 801 (1170)
-.++|..|...+++.|..+||.+|+||++.....| ...++|.+. +..|..+.||- .+++. |.++. ..-|+
T Consensus 182 ~~r~Rs~i~~~iR~f~~~~gFlEVeTPiL~~~~~G--a~ar~F~t~~~~~~~~~yL~~--SpqLylk~L~v~---G~~rV 254 (504)
T 1e1o_A 182 TFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGG--ASARPFITHHNALDLDMYLRI--APELYLKRLVVG---GFERV 254 (504)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEECCCCSEESSCCS--SCCCCCEEEETTTTEEEEECS--CSHHHHHHHHHH---TCCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCeEEecCCC--CcccceEeccCCCCceEEecc--CHHHHHHHHhhc---CCCcE
Confidence 46778899999999999999999999999532222 233567654 55688999992 33333 33332 24599
Q ss_pred EEecCeEEcCCCCCCCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 802 YEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
|++|++||+|..+.+.. ||+|+++|..+.+ ..+++.++-++++.+
T Consensus 255 yeIg~~FR~E~~~~rH~pEFt~lE~e~af~d----~~dlm~l~E~li~~~ 300 (504)
T 1e1o_A 255 FEINRNFRNEGISVRHNPEFTMMELYMAYAD----YHDLIELTESLFRTL 300 (504)
T ss_dssp EEEEEEECCCCCCC-CCSEEEEEEEEEESCC----HHHHHHHHHHHHHHH
T ss_pred EEEcccccCCCCCccccCceeeeeeeecCCC----HHHHHHHHHHHHHHH
Confidence 99999999987765444 7999999999864 445666666655543
No 318
>1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A*
Probab=97.90 E-value=9.3e-05 Score=84.42 Aligned_cols=121 Identities=15% Similarity=0.101 Sum_probs=86.0
Q ss_pred hhhHHhHHHHHHHHcCCcccccccee--c---cCC-Ccc-----cccceEEEeccCC-----------ceeeecCCCCHH
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMY--L---LGD-CPQ-----FKRNTVKLLTHGG-----------DLLELSHELRLP 786 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~--~---~~~-~~~-----~~~~my~f~D~~G-----------~~laLRPD~T~~ 786 (1170)
...+.+.++++|...||.++.+|.+. . ... ... .....|.+..+.. +..+||+-+++.
T Consensus 103 ~~~~~~~Ir~~f~~~Gf~Ev~~p~v~~~~~nfd~L~~p~~hpar~~~dt~~l~nP~s~~~~~~~~~~~~~~vLRt~tsp~ 182 (350)
T 1b7y_A 103 ITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPM 182 (350)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHTTTTTCCSSSTTTTSSCCCBEECSSCCCBCTTSCBCCSCEEECSSSTHH
T ss_pred HHHHHHHHHHHHHHCCCEEEECcchhcchhHHHhhCCCCCCccccccccEEEcCccccccccccccccccceeeccchHH
Confidence 45788899999999999999999881 1 111 111 0144566765543 778999999999
Q ss_pred HHHHHHhCCCCceeEEEecCeEEcCC-CCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc-CC
Q 001059 787 FIRWAISNQKSSFKRYEISSVYRRAI-GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF-FH 852 (1170)
Q Consensus 787 iaR~~~~~~~~P~r~~Y~g~VfR~e~-~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l-gi 852 (1170)
.+|.++. +..|+|+|.+|+|||.+. ......||+|+..=++|..-.. .++..++..+++.+ |.
T Consensus 183 llr~l~~-~~~piriFEiGrVFR~d~~d~tH~pEF~qlegl~~g~~v~f--~dLKg~le~ll~~lfG~ 247 (350)
T 1b7y_A 183 QVRYMVA-HTPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGEGIAM--AHLKGAIYELAQALFGP 247 (350)
T ss_dssp HHHHHHH-CCSSEEEEEEEEEECCCCCCSSCCSEEEEEEEEEEETTCCH--HHHHHHHHHHHHHHSCS
T ss_pred HHHHHHh-cCCCeeEEEeeeEEECCCCCCCCCChhHEEEEEEECCCCCH--HHHHHHHHHHHHhhcCC
Confidence 9999876 356999999999999754 3344568999999999863222 34455556666665 64
No 319
>3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=97.88 E-value=5.7e-05 Score=89.52 Aligned_cols=129 Identities=12% Similarity=0.015 Sum_probs=90.8
Q ss_pred hhhhHHhHHHHHHHHcCCccccc-cce-----eccC--C-Ccccc---cceEEEeccC----------------------
Q 001059 728 LRDYVVQVTKEMFRQHCAKHLEI-EPM-----YLLG--D-CPQFK---RNTVKLLTHG---------------------- 773 (1170)
Q Consensus 728 ~~~~I~~~i~~~f~~~Gy~~I~t-P~~-----~~~~--~-~~~~~---~~my~f~D~~---------------------- 773 (1170)
-...+.+.++++|...||.++.| |.+ .|.. . .+... ...|.+.++.
T Consensus 226 Pl~~v~~~Ir~if~~mGF~Ev~t~~~ves~~~NFDaLn~P~dHPaR~~~Dtfyi~~P~~~~~~~e~~~~~v~~~He~g~~ 305 (508)
T 3l4g_A 226 PLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQGGY 305 (508)
T ss_dssp HHHHHHHHHHHHHHHTTCEECCCCCSEEEHHHHTGGGTCCSSSTTSSTTTSCBBSTTCBCSCCCHHHHHHHHHHHHTCBT
T ss_pred HHHHHHHHHHHHHHHCcCeEeccCCccccHHHHHHhcCCCCCCcccccCceEEEcCccccccccHHHHHhhhhhhhcccc
Confidence 35678899999999999999876 555 1111 1 11111 2235555431
Q ss_pred -------------CceeeecCCCCHHHHHHHHhC----CCCceeEEEecCeEEcCCC-CCCCCceeEeEEEEeCCCCccc
Q 001059 774 -------------GDLLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRAIG-HSPPNRYLQGDFDIIGGASALT 835 (1170)
Q Consensus 774 -------------G~~laLRPD~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e~~-~~~~~ef~Q~GvEiiG~~~~~a 835 (1170)
++..+||+.+|+..+|++..| ...|+|+|++|+|||++.. ..+..+|+|++.-++|. ...
T Consensus 306 ~s~g~~~~~~~~~~~~~vLRThtsp~~lr~l~~N~~~~~~~PiriFeiGrVFR~d~~DatHlpeFhQlegl~~~~--~v~ 383 (508)
T 3l4g_A 306 GSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVADH--GLT 383 (508)
T ss_dssp TBCCCCSCCCHHHHTBEEECCCTHHHHHHHHHHHHTSSSCCCEEEEEEEEEECCSCCCSSSCSEEEEEEEEEEEE--SCC
T ss_pred CCccccccccccccccccccCCChHHHHHHHHHhhhhcCCCCceEEEEccEEecCCCCCCcCCeEEEEEEEEECC--CCC
Confidence 157899999999999999863 3469999999999999764 34556799999988763 244
Q ss_pred HHHHHHHHHHHHHHcCCCcceEEE
Q 001059 836 EAEVLKVTMDIVTRFFHAESCDIH 859 (1170)
Q Consensus 836 DaEvi~la~~~l~~lgi~~~~~i~ 859 (1170)
-+++..++..+++++|+.+ +.++
T Consensus 384 f~dLKg~Le~~l~~lG~~~-~rfr 406 (508)
T 3l4g_A 384 LGHLMGVLREFFTKLGITQ-LRFK 406 (508)
T ss_dssp HHHHHHHHHHHHHTTTCCC-CEEE
T ss_pred HHHHHHHHHHHHHHcCCcc-eEee
Confidence 4677888888888888753 4443
No 320
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.85 E-value=0.00013 Score=79.93 Aligned_cols=133 Identities=18% Similarity=0.177 Sum_probs=88.6
Q ss_pred eeeccCCcE-EEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFG-HVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG-~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.+..|..| .||+......+..+++|+-+. .....+.+|...|+.+. +--+.++++++..
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~------------- 91 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRT------------- 91 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-------------
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEE-------------
Confidence 345556665 699888877788899998652 23456889999999884 2224556655421
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-----
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ----- 512 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~----- 512 (1170)
....|+|||+++| ++.+..... ......+..++...|+-||+.
T Consensus 92 ---------------------------~~~~~lvme~l~G~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~ 140 (272)
T 4gkh_A 92 ---------------------------PDDAWLLTTAIPGKTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNC 140 (272)
T ss_dssp ---------------------------TTEEEEEEECCCSEEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGC
T ss_pred ---------------------------CCeEEEEEEeeCCccccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 2456899999987 555543321 112223444555555555531
Q ss_pred -----------------------------------------------------CccccCCCCCceeecCCCCEEEeecCc
Q 001059 513 -----------------------------------------------------GIIHRDLTPNNIFFDARNDIKIGDFGL 539 (1170)
Q Consensus 513 -----------------------------------------------------gIiHrDLKp~NILi~~~~~vKL~DFGl 539 (1170)
.++|+|+.|.|||++.++.+-|.||+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~ 220 (272)
T 4gkh_A 141 PFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGR 220 (272)
T ss_dssp CBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTT
T ss_pred CcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcc
Confidence 268999999999999877777999998
Q ss_pred chh
Q 001059 540 AKF 542 (1170)
Q Consensus 540 A~~ 542 (1170)
+..
T Consensus 221 a~~ 223 (272)
T 4gkh_A 221 VGI 223 (272)
T ss_dssp CEE
T ss_pred ccc
Confidence 863
No 321
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.80 E-value=6.6e-05 Score=87.62 Aligned_cols=61 Identities=25% Similarity=0.255 Sum_probs=38.5
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC----C-hhhHHHHHHHHHHHHhccC--CCc-eeEE
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK----S-LPVNDRILREVATLSRLQH--QHV-VRYY 420 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~----~-~~~~~~~~~Ev~iL~~l~H--pnI-V~l~ 420 (1170)
.+.||.|.++.||++....+++.|+||....... . .....++.+|..+|+.+.+ |.. .+++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~ 103 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVF 103 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEE
Confidence 5689999999999997765678999998653211 0 0123456789999988843 433 3455
No 322
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.66 E-value=0.00018 Score=83.12 Aligned_cols=56 Identities=13% Similarity=0.195 Sum_probs=40.9
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCC--ceeEEEE
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH--VVRYYQA 422 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hpn--IV~l~~~ 422 (1170)
..++.++.|....+|+... +|..+++|+.... ..+.+|+.+|+.+.... +.+++..
T Consensus 44 ~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~ 101 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDI 101 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEE
T ss_pred ceEEECCCCCcceEEEEEE--CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEe
Confidence 3467899999999998875 5889999977421 25888999999886544 3445543
No 323
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A*
Probab=97.66 E-value=0.00027 Score=80.63 Aligned_cols=119 Identities=8% Similarity=0.008 Sum_probs=78.5
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEe--c---cCCceeeecCCCCHHHHHHHHhCCCCc
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL--T---HGGDLLELSHELRLPFIRWAISNQKSS 798 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~--D---~~G~~laLRPD~T~~iaR~~~~~~~~P 798 (1170)
...++|..|...+++.|...||-+|+||++.-.. +++...+.|++. + ..+..+-||---=.-.-|.++...
T Consensus 34 ~~lr~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~-~~~a~~~~F~~~~~~~~~~~~~~~yL~~Spql~~k~l~~~g~--- 109 (345)
T 3a5y_A 34 PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQAT-VTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGC--- 109 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSC-CCCTTCCCCEEEECCSTTSCCEEEEECSCSHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCEEEecC-CCCCccceEEEEecCcccccCCCEeecCCHHHHHHHHHHcCC---
Confidence 4577889999999999999999999999985322 222233455432 1 112445566321122334454322
Q ss_pred eeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 799 FKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 799 ~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
-|+|++|+|||+|....+. .||+|+++|..+.+ -.+++.++-++++.+
T Consensus 110 ~rvyqIg~~FR~E~~~~rH~pEFt~lE~e~af~d----~~d~m~~~E~li~~v 158 (345)
T 3a5y_A 110 GPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD----MYRLMNEVDDLLQQV 158 (345)
T ss_dssp CSEEEEEEEECCCCCBTTBCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred CcEEEEEcceeCCCCcccccchhheeeeeeeCCC----HHHHHHHHHHHHHHH
Confidence 3999999999998774333 37999999999863 345677766666654
No 324
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.63 E-value=0.00025 Score=79.28 Aligned_cols=61 Identities=18% Similarity=0.129 Sum_probs=45.9
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCC---CceeEEE
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ---HVVRYYQ 421 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hp---nIV~l~~ 421 (1170)
...+.||.|.++.||++... +|..+++|+.+.... .....+.+|+..|+.+.+. .++++++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~--~~~~~~~~E~~~L~~L~~~~~v~vP~v~~ 81 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAG 81 (288)
T ss_dssp EEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEE
T ss_pred cceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCc--chhHHHHHHHHHHHHHHhcCCCCcCeEEE
Confidence 34678999999999999874 788999998653221 1234688999999999775 4666664
No 325
>2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A*
Probab=97.61 E-value=7.4e-05 Score=88.97 Aligned_cols=76 Identities=13% Similarity=0.187 Sum_probs=59.3
Q ss_pred eeeecCCCCHHHHHHHHhC---CCCceeEEEecCeEEcCCC-C-CCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 776 LLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAIG-H-SPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 776 ~laLRPD~T~~iaR~~~~~---~~~P~r~~Y~g~VfR~e~~-~-~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
..+||+.+++.+...+..| +..|+|+|++|+|||++.+ + .+..+|+|+++.+.|..... .++..++..+++.|
T Consensus 180 ~svLRTsLlPgLL~~lr~N~~r~~~pvrLFEIG~VFr~d~~~d~th~~Ef~qLagli~G~~vdf--~dLKgilE~LL~~L 257 (534)
T 2du3_A 180 TLTLRSHMTTGWFITLSHIADKLPLPIKLFSIDRCFRREQGEDATRLYTYFSASCVLVDEELSV--DDGKAVAEALLRQF 257 (534)
T ss_dssp EEEECSSHHHHHHHHHHTTTTTSCSSEEEEEEEEEECCCTTCSSSCCSEEEEEEEEEECSSCCH--HHHHHHHHHHHGGG
T ss_pred ccccCccchhhHHHHHHHHHhCCCCCeeEEEEeeEEecCccccccccceeeEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 4799999999666655543 3569999999999998654 4 34578999999999974332 56888888889888
Q ss_pred CCC
Q 001059 851 FHA 853 (1170)
Q Consensus 851 gi~ 853 (1170)
|+.
T Consensus 258 Gi~ 260 (534)
T 2du3_A 258 GFE 260 (534)
T ss_dssp TCC
T ss_pred CCC
Confidence 875
No 326
>2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A*
Probab=97.46 E-value=0.00049 Score=81.12 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=79.5
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCC-CcccccceEEEeccCCceeeec--CCCCHHHHHHHHhCCCCcee
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD-CPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFK 800 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~-~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~~~~~~~P~r 800 (1170)
...+++..|...+++.|..+||-+|+||+++-... |. .++|.+ +--|+.+.|| |++-.. +.++. --|
T Consensus 130 ~~~r~Rs~i~~~iR~ff~~~gFlEVeTPiL~~s~~eG~---~~~F~~-~~~g~~~~L~~SpqLylq--~l~~g----~~r 199 (435)
T 2xgt_A 130 ALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGG---STLFNL-DYFGEQSFLTQSSQLYLE--TCIPT----LGD 199 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESCCSSCT---TSCCEE-EETTEEEEECSCSHHHHH--HHHHH----HCS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCeEeeccCCCc---hhceee-ccCCcccccCCChHHHHH--Hhhhc----cCc
Confidence 34678889999999999999999999999843322 21 234544 3457888888 544333 22321 349
Q ss_pred EEEecCeEEcCCCCC-CCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHH
Q 001059 801 RYEISSVYRRAIGHS-PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTR 849 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~~~-~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~ 849 (1170)
+|++|++||+|.... +.. ||+|+++|..+.+ -.+++.++-+++..
T Consensus 200 vfeIg~~FR~E~~~t~RH~~EFT~lE~e~af~d----~~d~m~~~E~li~~ 246 (435)
T 2xgt_A 200 VFCIAQSYRAEKSRTRRHLAEYAHVEAECPFIT----LDDLMEKIEELVCD 246 (435)
T ss_dssp EEEEEEEECCCSSCCTTCCSEEEEEEEEEESCC----HHHHHHHHHHHHHH
T ss_pred eEEEecceecCCCCccccccceeEEEEEEecCC----HHHHHHHHHHHHHH
Confidence 999999999998664 444 8999999999864 34566666666554
No 327
>3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A*
Probab=97.39 E-value=0.00051 Score=80.80 Aligned_cols=115 Identities=13% Similarity=0.073 Sum_probs=77.8
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHhCCCCceeEEEe
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEI 804 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~Y~ 804 (1170)
-.+++..+...+++.|...||.+|+||++.-... +-..++|.+.. .|+.+.||.---.-.-|.++. .--|+|++
T Consensus 136 ~~~~Rs~i~~~iR~f~~~~gF~EVeTPiL~~~~~--eg~~~~f~~~~-~~~~~yL~~Spql~~q~l~~~---g~~rvf~i 209 (438)
T 3nem_A 136 IFKIRSSVFKAVRDFFHENGFIEIHTPKIIATAT--EGGTELFPMKY-FEEDAFLAQSPQLYKQIMMAS---GLDRVYEI 209 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCS--SCSSSCCEEEE-TTEEEEECSCSHHHHHHGGGT---TCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCcEEEeCCEEecCCC--CCCccceeEee-CCccEEEecChHHHHHHHHhc---CCCceEEE
Confidence 4667889999999999999999999999843322 11233565533 467888984332222233322 24599999
Q ss_pred cCeEEcCCCCCC-C-CceeEeEEEEeCCCCcccHHHHHHHHHHHHH
Q 001059 805 SSVYRRAIGHSP-P-NRYLQGDFDIIGGASALTEAEVLKVTMDIVT 848 (1170)
Q Consensus 805 g~VfR~e~~~~~-~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~ 848 (1170)
|++||+|....+ . .||+|+++|..+.++.. +++.++-++++
T Consensus 210 ~~~FR~E~~~t~RH~pEFt~le~e~a~~~~~~---d~m~~~E~li~ 252 (438)
T 3nem_A 210 APIFRAEEHNTTRHLNEAWSIDSEMAFIEDEE---EVMSFLERLVA 252 (438)
T ss_dssp EEEECCCSSCCTTCCSEEEEEEEEEESCSSHH---HHHHHHHHHHH
T ss_pred cceEECCCCCCcccccceeeeeeeeccCccHH---HHHHHHHHHHH
Confidence 999999887653 3 38999999999876432 34444444443
No 328
>2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii}
Probab=97.36 E-value=0.00038 Score=82.80 Aligned_cols=76 Identities=17% Similarity=0.212 Sum_probs=57.8
Q ss_pred ceeeecCCCCHHHHHHHHhC---CCCceeEEEecCeEEcCC--CCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHH
Q 001059 775 DLLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAI--GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTR 849 (1170)
Q Consensus 775 ~~laLRPD~T~~iaR~~~~~---~~~P~r~~Y~g~VfR~e~--~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~ 849 (1170)
+..+||+.+++.+...+..| +..|+|+|.+|+|||.+. ...+..+|+|++.-+.|.. ..-.++..++..+++.
T Consensus 191 e~svLRTsLlPGLL~~vr~N~~r~~~pvrlFEiGrVFr~D~~~d~th~~ef~qLaglv~G~~--vdF~DLKG~Le~ll~~ 268 (549)
T 2du7_A 191 TTLTLRSHMTSGWFITLSSLIKKRKLPLKLFSIDRCFRREQREDRSHLMSYHSASCVVVGED--VSVDDGKVVAEGLLAQ 268 (549)
T ss_dssp EEEECCSTTHHHHHHHHHTTTTTSCSSEEEEEEEEECCCCSSCSSSCCSCEEEEEEEEECTT--CCHHHHHHHHHHHHGG
T ss_pred cccccccccchhHHHHHHHHHhcCCCCeEEEEEeeEEecCCcccCcCCCcceEEEEEEECCC--CCHHHHHHHHHHHHHH
Confidence 35789999999666555543 456999999999999754 2345578999999999963 3345677788888888
Q ss_pred cCC
Q 001059 850 FFH 852 (1170)
Q Consensus 850 lgi 852 (1170)
||+
T Consensus 269 LGi 271 (549)
T 2du7_A 269 FGF 271 (549)
T ss_dssp GTC
T ss_pred cCC
Confidence 876
No 329
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.28 E-value=0.0016 Score=73.58 Aligned_cols=30 Identities=17% Similarity=0.309 Sum_probs=27.6
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAK 541 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~ 541 (1170)
..++|+|+++.|||++.++.+.|+||+.+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 579999999999999888899999999875
No 330
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.24 E-value=0.00056 Score=78.31 Aligned_cols=66 Identities=6% Similarity=-0.033 Sum_probs=41.3
Q ss_pred eEEeee-ccCCcEEEEEEEEc--c----CCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhcc-C--CCceeEEEEE
Q 001059 358 EELQPL-GHGGFGHVVLCKNK--L----DGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-H--QHVVRYYQAW 423 (1170)
Q Consensus 358 ~~~~~L-G~G~fG~Vyka~~~--~----tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~-H--pnIV~l~~~~ 423 (1170)
...+.| +.|....+|++... . +|..+++|+...... .......+.+|+.+|+.+. + -.+.+++.++
T Consensus 23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~ 99 (357)
T 3ats_A 23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIE 99 (357)
T ss_dssp EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEE
T ss_pred EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEc
Confidence 345678 88999999988753 1 166899997643210 0000135778999998884 3 3466677554
No 331
>1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A*
Probab=97.21 E-value=0.0014 Score=79.96 Aligned_cols=99 Identities=13% Similarity=0.139 Sum_probs=68.9
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEec--cCCceeeecCCCCHHHHH--HHHhCCCCcee
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLT--HGGDLLELSHELRLPFIR--WAISNQKSSFK 800 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D--~~G~~laLRPD~T~~iaR--~~~~~~~~P~r 800 (1170)
..++|..|...+++.|...||-+|+||++.-...+. .+. |.+.. ..|..++|| ..+++.. .++. . =-|
T Consensus 137 ~l~~Rs~i~~~iR~fl~~~gFlEVeTPiL~~s~~eG--Ar~-F~v~~~~~~~~~y~L~--qSPQl~kq~Lmv~-G--~~r 208 (585)
T 1c0a_A 137 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEG--ARD-YLVPSRVHKGKFYALP--QSPQLFKQLLMMS-G--FDR 208 (585)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSS--SCC-CEEECSSSTTCEEECC--SCSHHHHHHHHHT-T--CCE
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEeCCEEecCCCCC--Ccc-ceecccccCCceEeCc--cCHHHHHHHHHhc-C--CCc
Confidence 467788999999999999999999999985332211 123 43322 346667787 3455543 2332 1 249
Q ss_pred EEEecCeEEcCCCCCCCC-ceeEeEEEEeCCC
Q 001059 801 RYEISSVYRRAIGHSPPN-RYLQGDFDIIGGA 831 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~ 831 (1170)
+|++|++||.|.....+. ||+|+++|.-+.+
T Consensus 209 vfqI~~~FR~E~~~t~r~pEFT~lE~e~af~d 240 (585)
T 1c0a_A 209 YYQIVKCFRDEDLRADRQPEFTQIDVETSFMT 240 (585)
T ss_dssp EEEEEEEECCCCCBTTBCSEEEEEEEEEESCC
T ss_pred eEEEeceeecCCCCCCcCcccceeeeeecCCC
Confidence 999999999986554333 8999999998864
No 332
>1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A
Probab=97.19 E-value=0.0016 Score=79.27 Aligned_cols=99 Identities=11% Similarity=0.116 Sum_probs=69.0
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEec--cCCceeeecCCCCHHHHH--HHHhCCCCcee
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLT--HGGDLLELSHELRLPFIR--WAISNQKSSFK 800 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D--~~G~~laLRPD~T~~iaR--~~~~~~~~P~r 800 (1170)
..++|..+...+++.|...||-+|+||++.-...+. .+. |.... ..|..++||- .+++.. .++. . =-|
T Consensus 143 ~l~~Rs~i~~~iR~fl~~~gF~EVeTPiL~~s~~eG--Ar~-F~v~~~~~~~~~y~L~q--SPQl~kq~Lmv~-G--~~r 214 (580)
T 1l0w_A 143 NLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEG--ARD-FLVPYRHEPGLFYALPQ--SPQLFKQMLMVA-G--LDR 214 (580)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSS--SCC-CEEECTTSTTEEEECCS--CSHHHHHHHHHT-T--CSE
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEeCCEEecCCCCC--CCC-ccccccccCCceeECcc--CHHHHHHHHHHh-c--cCC
Confidence 467788999999999999999999999985332211 122 43322 2466677873 455543 2332 1 239
Q ss_pred EEEecCeEEcCCCCCCCC-ceeEeEEEEeCCC
Q 001059 801 RYEISSVYRRAIGHSPPN-RYLQGDFDIIGGA 831 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~ 831 (1170)
+|++|+|||.|.....+. ||+|+++|.-+.+
T Consensus 215 vfqI~~~FR~E~~~~~r~pEFT~lE~e~af~d 246 (580)
T 1l0w_A 215 YFQIARCFRDEDLRADRQPDFTQLDLEMSFVE 246 (580)
T ss_dssp EEEEEEEECCCCCCSSCCSEEEEEEEEEESCC
T ss_pred eEEEeceeeCCCCCCCcCCCccceeeeecCCC
Confidence 999999999987654433 8999999998864
No 333
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.14 E-value=0.004 Score=65.78 Aligned_cols=134 Identities=16% Similarity=0.184 Sum_probs=89.7
Q ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH-HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCC
Q 001059 479 TLRQVFESY-DHFDKELAWHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT 556 (1170)
Q Consensus 479 sL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL-Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~ 556 (1170)
+|.++|... .+++++++|.++.|.+.+|.-+ +...-..+=+-|..|++..+|+|...+ +.+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C------------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc---------------
Confidence 799999865 5799999999999999998876 211212333456899999999987663 1110
Q ss_pred CCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCccccCCHHH
Q 001059 557 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ 636 (1170)
Q Consensus 557 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~ 636 (1170)
.....+.|||.... ..+.+.=|||||+++|..+- -+..+......++++
T Consensus 98 ------------~~~~~~~~pe~~~~--~~te~~~IysLG~tLY~ALD-----------------ygL~e~eE~eLS~~L 146 (229)
T 2yle_A 98 ------------AGEPPPVAGKLGYS--QCMETEVIESLGIIIYKALD-----------------YGLKENEERELSPPL 146 (229)
T ss_dssp ---------------------CCSSS--SSCHHHHHHHHHHHHHHHHT-----------------TTCCTTEEECCCHHH
T ss_pred ------------ccccCCCChhhccc--cchHHHHHHHHHHHHHHHhh-----------------cCCCcccchhhCHHH
Confidence 11234668887642 35788999999999999872 111223445677899
Q ss_pred HHHHHHccCC-------------------------CCCCCCCHHHHHh
Q 001059 637 ESLLRRLMSP-------------------------SPSDRPSATELLQ 659 (1170)
Q Consensus 637 ~~LI~~~L~~-------------------------dP~~RPta~eiL~ 659 (1170)
.+||..|... .+..|++..+|++
T Consensus 147 E~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~ 194 (229)
T 2yle_A 147 EQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMK 194 (229)
T ss_dssp HHHHHHHTTCCC--------------------CCSCCCCCCSHHHHHH
T ss_pred HHHHHHHHhcccccccccccccccccccccccccccccCcCCHHHHHH
Confidence 9999999866 2457888888875
No 334
>2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A*
Probab=96.98 E-value=0.0031 Score=70.51 Aligned_cols=118 Identities=9% Similarity=0.052 Sum_probs=79.5
Q ss_pred hhhHHhHHHHHHHHcCCccccccce-e----ccCC-Ccc-c-c---cceEEEeccCCceeeecCCCCHHHHHHHHhCC-C
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPM-Y----LLGD-CPQ-F-K---RNTVKLLTHGGDLLELSHELRLPFIRWAISNQ-K 796 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~-~----~~~~-~~~-~-~---~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~-~ 796 (1170)
...+.+.++++|...||.||.+|.+ . +... ... . . ...|.+. +..+||+-+++.+.|.++.|. .
T Consensus 55 ~~~~~~~iR~~l~~~Gf~Ev~~s~l~~~~~nf~~l~~~~~~par~~~d~~~l~----e~~vLRtsl~p~ll~~l~~N~~~ 130 (294)
T 2rhq_A 55 LTRTVEEIEDLFLGLGYEIVDGYEVEQDYYNFEALNLPKSHPARDMQDSFYIT----DEILMRTHTSPVQARTMEKRNGQ 130 (294)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHTGGGTCCTTCGGGCTTTSCBSS----SSEEECSSSHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcceeeehhhHHhhCCCCCccccccCCcEEEc----CcceeeccCHHHHHHHHHhcCCC
Confidence 4568889999999999999988877 1 1111 111 0 0 1134442 567999999999999998874 4
Q ss_pred CceeEEEecCeEEcCC-CCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc-CC
Q 001059 797 SSFKRYEISSVYRRAI-GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF-FH 852 (1170)
Q Consensus 797 ~P~r~~Y~g~VfR~e~-~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l-gi 852 (1170)
.|+|+|.+|+|||.+. ......||+|+.+=+.|..-.. .++..++..+++.+ |+
T Consensus 131 ~~~riFEiG~Vfr~d~~d~~h~~Ef~~Le~~~~g~~~df--~dlKg~le~ll~~l~g~ 186 (294)
T 2rhq_A 131 GPVKIICPGKVYRRDSDDATHSHQFTQIEGLVVDKNIKM--SDLKGTLELVAKKLFGA 186 (294)
T ss_dssp SCEEEEEEEEEECCCCCBTTBCSEEEEEEEEEEESSCCH--HHHHHHHHHHHHHHHCT
T ss_pred CCccEEEEcCEEecCCCCCCCCChhhEEEEEEECCCCCH--HHHHHHHHHHHHHHhCC
Confidence 6999999999999743 2223358999998888853111 23444555555555 65
No 335
>3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A
Probab=96.94 E-value=0.002 Score=76.09 Aligned_cols=113 Identities=14% Similarity=0.069 Sum_probs=75.6
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCC-CcccccceEEEeccCCceeeecCCCCHHHHHHHHhCCCCceeEEE
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYE 803 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~Y 803 (1170)
-.+++..|...+++.|...||-+|+||++.-... |. .++|.+ +--|+.+.||----.-.-+.++. --|+|+
T Consensus 155 ~lr~Rs~i~~~iR~ff~~~gF~EVeTPiL~~s~~eGg---~~~f~~-~~~~~~~~L~~SpqL~lq~l~~g----~~rVye 226 (456)
T 3m4p_A 155 VLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGG---STLFKL-QYFNEPAYLTQSSQLYLESVIAS----LGKSFC 226 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEEC---------CCCCEE-EETTEEEEECSCCHHHHHTTHHH----HSSEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEeCCeeecCCCCCc---cccccc-cccCCCcccccCHHHHHHHHHhc----cCcEEE
Confidence 4677889999999999999999999999843221 21 224443 34467778876433333333331 248999
Q ss_pred ecCeEEcCCCCCCC--CceeEeEEEEeCCCCcccHHHHHHHHHHHHHH
Q 001059 804 ISSVYRRAIGHSPP--NRYLQGDFDIIGGASALTEAEVLKVTMDIVTR 849 (1170)
Q Consensus 804 ~g~VfR~e~~~~~~--~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~ 849 (1170)
+|++||+|....++ -||+|+++|.-+.+ --+++.++-++++.
T Consensus 227 ig~~FR~E~~~t~rH~pEFtmlE~e~af~d----~~d~m~~~E~li~~ 270 (456)
T 3m4p_A 227 MLSSYRAEQSRTVRHLAEYLHLEAELPFIS----FEDLLNHLEDLVCT 270 (456)
T ss_dssp EEEEECCCSCCCSSCCSEEEEEEEEEESCC----HHHHHHHHHHHHHH
T ss_pred EEhheecCCCCCCcchHHHHHhHHHHhcCC----HHHHHHHHHHHHHH
Confidence 99999998765433 38999999998864 23455555555543
No 336
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.90 E-value=0.0044 Score=72.77 Aligned_cols=32 Identities=19% Similarity=0.372 Sum_probs=28.3
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
+...++|+|++|.|||++.++ ++|.||+.+..
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 456799999999999998776 99999999874
No 337
>4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis}
Probab=96.84 E-value=0.0068 Score=72.57 Aligned_cols=100 Identities=8% Similarity=-0.014 Sum_probs=69.5
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEE-eccCCceeeecCCCCHHHH--HHHHhCCCCceeE
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFI--RWAISNQKSSFKR 801 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f-~D~~G~~laLRPD~T~~ia--R~~~~~~~~P~r~ 801 (1170)
-.++|..|...+++.|...||-+|+||++.....|. ..+.|.. .+.-|..+.||- .+++. |.++. .--|+
T Consensus 203 ~fr~Rs~i~~~iR~ff~~~gFlEVeTPiL~~~~gGA--~a~pF~t~~n~~~~~~yL~~--SpqLylk~L~v~---G~~rV 275 (529)
T 4ex5_A 203 TFRARTKAIASIRKFMGDADFMEVETPMLHPIPGGA--AAKPFVTHHNALDMEMFLRI--APELYLKRLIVG---GFERV 275 (529)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCCSS--SSCCCEEEETTTTEEEEECS--CSHHHHHHHHHT---TCSEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEeCCeeeccCCCC--cccccccccccCCcceeccc--CHHHHHHHHHhc---CCCcE
Confidence 467788999999999999999999999995322222 1234432 234467778884 33443 44442 23599
Q ss_pred EEecCeEEcCCCCCCC-CceeEeEEEEeCCC
Q 001059 802 YEISSVYRRAIGHSPP-NRYLQGDFDIIGGA 831 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~ 831 (1170)
|++|++||+|....+. -||+|+.+|.-+.+
T Consensus 276 yeIg~~FR~E~~~~rH~pEFtmlE~e~af~d 306 (529)
T 4ex5_A 276 FEINRNFRNEGVSPRHNPEFTMMEFYAAYTD 306 (529)
T ss_dssp EEEEEEECCSCCBTTBCSEEEEEEEEEETCC
T ss_pred EEeehheecCCCCCCcccHhHhhhhhhhcCC
Confidence 9999999998655333 37999999998753
No 338
>3pco_A Phenylalanyl-tRNA synthetase, alpha subunit; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli}
Probab=96.83 E-value=0.002 Score=72.64 Aligned_cols=96 Identities=11% Similarity=-0.043 Sum_probs=68.0
Q ss_pred hhhHHhHHHHHHHHcCCccccccceec-----cCC--Ccc-cc---cceEEEeccCCceeeecCCCCHHHHHHHHhCCCC
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYL-----LGD--CPQ-FK---RNTVKLLTHGGDLLELSHELRLPFIRWAISNQKS 797 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~-----~~~--~~~-~~---~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~ 797 (1170)
...+.+.++++|...||+++.+|.+.. ... ... .. ...|.+. +..+||..+++..+|.+.. +..
T Consensus 109 ~~~~~~~Ir~if~~~Gf~ev~~~~ve~~~~nFd~Ln~p~dhpaR~~~dt~~i~----e~~vLRThtsp~~lr~l~~-~~~ 183 (327)
T 3pco_A 109 VTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFD----TTRLLRTQTSGVQIRTMKA-QQP 183 (327)
T ss_dssp HHHHHHHHHHHHHTTTCBCCCCCSEECTCCCCCTTTCCSSSHHHHHTTCCBSS----SSCEECSCTHHHHHHHHTT-CCS
T ss_pred HHHHHHHHHHHHHHCCCeEEECCCccCCHHHHHhhCCCCCChhhcccccEEeC----CCceecccCCHHHHHHHHh-CCC
Confidence 456888999999999999999998711 111 011 11 2244442 5679999999999998865 456
Q ss_pred ceeEEEecCeEEcCCCCCCCCceeEeEEEEeC
Q 001059 798 SFKRYEISSVYRRAIGHSPPNRYLQGDFDIIG 829 (1170)
Q Consensus 798 P~r~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG 829 (1170)
|+|+|..|+|||.+......-.|+|+..=++|
T Consensus 184 pirifeiGrVyR~d~d~th~p~fhqlegl~v~ 215 (327)
T 3pco_A 184 PIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVD 215 (327)
T ss_dssp SCCBCCEECCBCSCCBTTBCSBCCEEEEEEEE
T ss_pred CeeEEeeccEEecCCCcccCCcccEEEEEEEC
Confidence 99999999999986333344469998655555
No 339
>3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens}
Probab=96.82 E-value=0.0071 Score=72.66 Aligned_cols=100 Identities=9% Similarity=0.039 Sum_probs=70.9
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEe-ccCCceeeecCCCCHHHH--HHHHhCCCCceeE
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFKR 801 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~~~~~~~P~r~ 801 (1170)
-.++|..|...+++.|...||-+|+||++.-. .++ -..+.|... +.-|..+.||- .+++. |.++. .--|+
T Consensus 175 ~~r~Rs~i~~~iR~f~~~~gF~EVeTPiL~~~-~gG-a~a~~F~t~~~~~~~~~yL~~--SpqL~lk~liv~---g~~rV 247 (521)
T 3bju_A 175 KFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGG-AVAKPFITYHNELDMNLYMRI--APELYHKMLVVG---GIDRV 247 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESS-CCS-SSCCCCEEEETTTTEEEEECS--CSHHHHHHHHHT---TCCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEeCceeecc-CCC-ccccceeeecccCCcceEeeC--CHHHHHHHHHhc---CcCce
Confidence 36678899999999999999999999998532 222 123455432 33478889983 44444 44442 12499
Q ss_pred EEecCeEEcCCCCCCC-CceeEeEEEEeCCC
Q 001059 802 YEISSVYRRAIGHSPP-NRYLQGDFDIIGGA 831 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~ 831 (1170)
|++|++||+|....+. -||+|+.+|.-+.+
T Consensus 248 yeig~~FR~E~~~trH~pEFtmlE~e~af~d 278 (521)
T 3bju_A 248 YEIGRQFRNEGIDLTHNPEFTTCEFYMAYAD 278 (521)
T ss_dssp EEEEEEECCSCCBTTBCSEEEEEEEEEETCC
T ss_pred EEEEcceeCCCCCCccchhhhhhhhhhhcCC
Confidence 9999999998655433 37999999998863
No 340
>2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=96.78 E-value=0.0063 Score=73.03 Aligned_cols=76 Identities=16% Similarity=0.238 Sum_probs=54.4
Q ss_pred eeeecCCCCHHHHHHHHh---CCCCceeEEEecCeEEcCCC--CCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 776 LLELSHELRLPFIRWAIS---NQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 776 ~laLRPD~T~~iaR~~~~---~~~~P~r~~Y~g~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
..+||+.+++.+...+.. ++..|+|+|.+|+|||.+.. ..+..+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTsLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~vdF--~DLKGvLE~LL~~L 276 (648)
T 2odr_B 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (648)
T ss_dssp SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhcCCCCeEEEEEeeEEecCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 568999999854444433 44679999999999997542 224578999999999973222 35666777777777
Q ss_pred CCC
Q 001059 851 FHA 853 (1170)
Q Consensus 851 gi~ 853 (1170)
|+.
T Consensus 277 Gi~ 279 (648)
T 2odr_B 277 GFT 279 (648)
T ss_dssp TCC
T ss_pred CCC
Confidence 763
No 341
>2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=96.77 E-value=0.0064 Score=72.99 Aligned_cols=76 Identities=16% Similarity=0.238 Sum_probs=54.3
Q ss_pred eeeecCCCCHHHHHHHHh---CCCCceeEEEecCeEEcCCC--CCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 776 LLELSHELRLPFIRWAIS---NQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 776 ~laLRPD~T~~iaR~~~~---~~~~P~r~~Y~g~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
..+||+.+++.+...+.. ++..|+|+|.+|+|||.+.. ..+..+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTSLlPGLL~~lr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~vdF--~DLKGvLE~LL~~L 276 (665)
T 2odr_A 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (665)
T ss_dssp SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhcCCCCeEEEEEeeEEecCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 568999999854444433 44679999999999997542 224578999999999973222 35666777777777
Q ss_pred CCC
Q 001059 851 FHA 853 (1170)
Q Consensus 851 gi~ 853 (1170)
|+.
T Consensus 277 Gi~ 279 (665)
T 2odr_A 277 GFT 279 (665)
T ss_dssp TCC
T ss_pred CCC
Confidence 763
No 342
>2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=96.77 E-value=0.0065 Score=73.06 Aligned_cols=76 Identities=16% Similarity=0.238 Sum_probs=54.3
Q ss_pred eeeecCCCCHHHHHHHHh---CCCCceeEEEecCeEEcCCC--CCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 776 LLELSHELRLPFIRWAIS---NQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 776 ~laLRPD~T~~iaR~~~~---~~~~P~r~~Y~g~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
..+||+.+++.+...+.. ++..|+|+|.+|+|||.+.. ..+..+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTSLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~vDF--~DLKGvLE~LL~~L 276 (685)
T 2odr_D 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (685)
T ss_dssp SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhCCCCCeEEEEeccEEecCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 568999999854444433 44679999999999997542 224578999999999973222 35666777777777
Q ss_pred CCC
Q 001059 851 FHA 853 (1170)
Q Consensus 851 gi~ 853 (1170)
|+.
T Consensus 277 Gi~ 279 (685)
T 2odr_D 277 GFT 279 (685)
T ss_dssp TCC
T ss_pred CCC
Confidence 763
No 343
>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=96.73 E-value=0.007 Score=72.92 Aligned_cols=76 Identities=16% Similarity=0.238 Sum_probs=54.3
Q ss_pred eeeecCCCCHHHHHHHHh---CCCCceeEEEecCeEEcCCC--CCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 776 LLELSHELRLPFIRWAIS---NQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 776 ~laLRPD~T~~iaR~~~~---~~~~P~r~~Y~g~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
..+||+.+++.+...+.. ++..|+|+|.+|+|||.+.. ..+..+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTSLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~EfhqLeGlv~G~~vDF--~DLKGvLE~LL~~L 276 (701)
T 2odr_C 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (701)
T ss_dssp EEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhCCCCCeEEEEEeeEEccCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 568999999855444443 44679999999999997542 224578999999999973222 35666777777777
Q ss_pred CCC
Q 001059 851 FHA 853 (1170)
Q Consensus 851 gi~ 853 (1170)
|+.
T Consensus 277 Gi~ 279 (701)
T 2odr_C 277 GFT 279 (701)
T ss_dssp TCC
T ss_pred CCC
Confidence 763
No 344
>3ig2_A Phenylalanyl-tRNA synthetase beta chain; phers, MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.09A {Bacteroides fragilis}
Probab=96.73 E-value=0.0078 Score=64.00 Aligned_cols=125 Identities=14% Similarity=0.086 Sum_probs=85.1
Q ss_pred hhhHHhHHHHHHHHcCCccccccceeccC---C-CcccccceEEEeccCC-ceeeecCCCCHHHHHHHHhCCC---Ccee
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG---D-CPQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISNQK---SSFK 800 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~-~~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~~~~~~---~P~r 800 (1170)
...+++.+++.+...||.||.|-.|.-.. . .....+...++.++-. +.-+||+.+.+.+.+.++.|.. .++|
T Consensus 6 ~~~~~~~ir~~l~~~G~~Evitysf~~~~~~~~~~~~~~~~~v~l~NPls~e~~vmRtsLlpgLL~~~~~N~~r~~~~v~ 85 (213)
T 3ig2_A 6 SNKLQNLVAEQLVGCGFNEILNNSLTRAAYYDGLESYPSKNLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLK 85 (213)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEECGGGGTTCSSSCGGGCEEBSSGGGCSCCEECSCSHHHHHHHHHHC------CCE
T ss_pred HHHHHHHHHHHHHHCCCeEEeccccCCHHHHHhhcccCcCCeEEEeCCcchhHHHHHHHhHHHHHHHHHHHhcCCCCCee
Confidence 34678889999999999999999982211 1 1112245677777764 4558999999999999988643 3699
Q ss_pred EEEecCeEEcCCC-------CCCCCceeEeEEEEeCCC--------CcccHH-HHHHHHHHHHHHcCCC
Q 001059 801 RYEISSVYRRAIG-------HSPPNRYLQGDFDIIGGA--------SALTEA-EVLKVTMDIVTRFFHA 853 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~-------~~~~~ef~Q~GvEiiG~~--------~~~aDa-Evi~la~~~l~~lgi~ 853 (1170)
+|.+|+||+.+.. ..+..|..++++=+.|.. ....|. ++-.++..++..+|+.
T Consensus 86 lFEiG~Vf~~~~~~~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~df~dlKg~ve~ll~~lg~~ 154 (213)
T 3ig2_A 86 FFEFGNCYHFDAEKKNPEKVLAPYSEDYHLGLWVTGKMVSNSWAHADENTSVYELKAYVENIFKRLGLD 154 (213)
T ss_dssp EEEEEEEEEECC----------CEEEEEEEEEEEEEEECCSCC----CHHHHHHHHHHHHHHHHHTTBC
T ss_pred EEEeeeEEecCcccccccccccccchhHEEEEEEECCCccccCCCCCCCcCHHHHHHHHHHHHHHhCCC
Confidence 9999999997431 123356777887777742 123443 5666667777777775
No 345
>4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens}
Probab=96.66 E-value=0.011 Score=71.77 Aligned_cols=114 Identities=11% Similarity=0.137 Sum_probs=75.0
Q ss_pred hhhhhhhHHhHHHHHHH-HcCCccccccceeccCCCcccccceEEEec-cCCceeeecCCCCHHHH--HHHHhCCCCcee
Q 001059 725 DTELRDYVVQVTKEMFR-QHCAKHLEIEPMYLLGDCPQFKRNTVKLLT-HGGDLLELSHELRLPFI--RWAISNQKSSFK 800 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~-~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D-~~G~~laLRPD~T~~ia--R~~~~~~~~P~r 800 (1170)
..++|..+...+++.|. ..||-+|+||++.-...+.. .. |.+.. ..|..+.|+- .+++. +.++. . =-|
T Consensus 147 ~lr~Rs~i~~~iR~f~~~~~gF~EVeTPiL~~st~~GA--~~-F~v~~~~~g~~~~L~q--Spql~kq~l~v~-g--~~r 218 (617)
T 4ah6_A 147 NLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGA--KE-FLVPSREPGKFYSLPQ--SPQQFKQLLMVG-G--LDR 218 (617)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCEECCCCSSBCCCCSSS--CC-CEEECSSTTCEEECCS--STTHHHHHHHHT-S--CSE
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEeCCeeccCCCCCC--cC-ceeccccCCccccccc--CHHHHHHHHHhc-c--cCc
Confidence 36778899999999996 79999999999843222211 12 43322 3467778873 33333 23332 1 239
Q ss_pred EEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 801 RYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
+|++|++||.|....++ -||+|+++|.-+.+ --+++.++-+++..+
T Consensus 219 vfqi~~~FR~E~~~t~r~pEFt~lE~e~af~d----~~d~m~~~E~l~~~~ 265 (617)
T 4ah6_A 219 YFQVARCYRDEGSRPDRQPEFTQIDIEMSFVD----QTGIQSLIEGLLQYS 265 (617)
T ss_dssp EEEEEEEECCCSSCSSSCSEEEEEEEEEESCC----HHHHHHHHHHHHHHH
T ss_pred EEEEEhheecccCCCCcCcceecceeeecCCC----HHHHHHHHHHHHHHH
Confidence 99999999998766544 47999999998753 234555555555543
No 346
>3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, phenylalanyl-tRNA SYNT beta subunit, structural genomics, PSI-2; HET: TAM; 2.44A {Porphyromonas gingivalis}
Probab=96.55 E-value=0.014 Score=61.92 Aligned_cols=125 Identities=14% Similarity=0.021 Sum_probs=86.8
Q ss_pred hhhHHhHHHHHHHHcCCccccccceeccC---C-CcccccceEEEeccCC-ceeeecCCCCHHHHHHHHhCC---CCcee
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG---D-CPQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISNQ---KSSFK 800 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~-~~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~~~~~---~~P~r 800 (1170)
...+++.+++.+...||.||.|-.|.-.. . .....+...++.++-. +.-+||+.+.+.+.+.++.|. ..++|
T Consensus 6 ~~~~~~~ir~~L~~~G~~Evitysf~s~~~~~~~~~~~~~~~v~l~NPls~e~~vmRtsLlpgLL~~~~~N~~r~~~~~~ 85 (213)
T 3ica_A 6 RYKWQTVVSEQLVGAGFNEILNNSLTAGSYYEGLKSHPREMAVELMNPLSQELNCMRQTLLFGGLETLSHNLRRKHLSLY 85 (213)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEEEGGGGTTCSSSCGGGCCBCSSBSCSSEEEECSSSHHHHHHHHHHHHTTTCSEEE
T ss_pred HHHHHHHHHHHHHHCCCceeeeccCCCHHHHhhhcccCcCCeEEecCCccHHHHHHHHHhHHHHHHHHHHHHcCCCCCee
Confidence 44688899999999999999999992211 1 1112234566777764 455899999999999888742 33699
Q ss_pred EEEecCeEEcCCC-------CCCCCceeEeEEEEeCCC--------CcccHH-HHHHHHHHHHHHcCCC
Q 001059 801 RYEISSVYRRAIG-------HSPPNRYLQGDFDIIGGA--------SALTEA-EVLKVTMDIVTRFFHA 853 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~-------~~~~~ef~Q~GvEiiG~~--------~~~aDa-Evi~la~~~l~~lgi~ 853 (1170)
+|.+|+||+.+.. .++..|..++++=+.|.. ....|. ++-.++..++..+|+.
T Consensus 86 lFEiG~Vf~~~~~~~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~df~d~Kg~ve~ll~~lgi~ 154 (213)
T 3ica_A 86 LFEWGKCYRFHAAKRTDETPLAAYAEDDRLGIWICGQRVHNSWAHPEEPTSVFELKAVVEQVLCRVGIE 154 (213)
T ss_dssp EEEEEEEEEEECCCC--CCSSCEEEEEEEEEEEEEEBCCC-----CCCBCCHHHHHHHHHHHHHHTTCC
T ss_pred EEEeeeEEecCCccccccccccccchhhEEEEEEeCCCCcccCCCCCCCcCHHHHHHHHHHHHHHhCCC
Confidence 9999999997431 122356777877777742 223453 6666777778888875
No 347
>3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica}
Probab=96.28 E-value=0.011 Score=71.07 Aligned_cols=97 Identities=8% Similarity=0.039 Sum_probs=60.0
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeecCCCCHHHH--HHHHhCCCCceeE
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI--RWAISNQKSSFKR 801 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia--R~~~~~~~~P~r~ 801 (1170)
.-.+++..+...+++.|...||-+|+||++.-... + -..+.|.+ +--|+.+.|+- .+++. |.++. .--|+
T Consensus 242 ~~~r~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~~-e-gga~~F~v-~~~~~~~yL~~--Spql~~k~ll~~---g~~rV 313 (548)
T 3i7f_A 242 AIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSS-E-GGSNIFEV-KYFDRKAYLAQ--SPQLYKQMAIMG---DFRKV 313 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSBC----------------------CCBCS--CTHHHHHHHHTT---TCCEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEeCCEEecccC-C-CCcceeEE-ecCCCceEecc--CHHHHHHHHHhc---CcCcE
Confidence 34677889999999999999999999999833221 1 11234542 22345567774 34554 34432 23599
Q ss_pred EEecCeEEcCCCCCCC--CceeEeEEEEe
Q 001059 802 YEISSVYRRAIGHSPP--NRYLQGDFDII 828 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~--~ef~Q~GvEii 828 (1170)
|++|++||.|.....+ -||+|+++|.-
T Consensus 314 feI~~~FR~E~~~t~RHl~EFtmlE~e~a 342 (548)
T 3i7f_A 314 FEVGPVFRAENSNTRRHLTEFEGLDIEME 342 (548)
T ss_dssp EEEEEECCCSCCCSSSCCSCEEEEEEEEE
T ss_pred EEEeeeEecCCCCCCCcchhhhchhhhhh
Confidence 9999999998765333 48999999973
No 348
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.24 E-value=0.02 Score=63.73 Aligned_cols=29 Identities=21% Similarity=0.252 Sum_probs=25.1
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
.++|+|+.|.||| ..++.+.|+||..+..
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 4899999999999 5667889999998863
No 349
>3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=95.97 E-value=0.024 Score=69.31 Aligned_cols=102 Identities=9% Similarity=0.017 Sum_probs=74.7
Q ss_pred hhHHhHHHHHHHHcCCccccccceec----cCC-C-cccccceEEEeccCC-ceeeecCCCCHHHHHHHHhCCC--Ccee
Q 001059 730 DYVVQVTKEMFRQHCAKHLEIEPMYL----LGD-C-PQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISNQK--SSFK 800 (1170)
Q Consensus 730 ~~I~~~i~~~f~~~Gy~~I~tP~~~~----~~~-~-~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~~~~~~--~P~r 800 (1170)
+.+.+.+++++...||+|+.|+.|.- ... + .......+++.++-. +.-+||+.+.+.+.+.++.|.. .|+|
T Consensus 394 ~~~~~~ir~~l~~~Gf~Evitysf~s~~~~~~~l~~~~~~~~~v~L~NPis~e~svmRtsLlpgLL~~l~~N~~~~~~vr 473 (589)
T 3l4g_B 394 NKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLK 473 (589)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCSEECHHHHTGGGTSCTTSSCCCBBSSCSSGGGSEECSCSHHHHHHHHHHTTTSCSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEecCcccCHHHHHHHhCCCCCCCCeEEEcCCCchhHhHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 45678899999999999999999921 111 1 111134566777765 4458999999999999987643 4899
Q ss_pred EEEecCeEEcCCC-CCCCCceeEeEEEEeCCC
Q 001059 801 RYEISSVYRRAIG-HSPPNRYLQGDFDIIGGA 831 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~-~~~~~ef~Q~GvEiiG~~ 831 (1170)
+|.+|+|||.+.. ..+.+++.|+++-+.|..
T Consensus 474 lFEiG~Vf~~d~~~~~~~~e~~~la~~~~g~~ 505 (589)
T 3l4g_B 474 LFEISDIVIKDSNTDVGAKNYRHLCAVYYNKN 505 (589)
T ss_dssp EEEEEEEEEECTTSTTSEEEEEEEEEEEESSS
T ss_pred EEEeeeEEecCCccccCCccccEEEEEEECCC
Confidence 9999999997432 234457889988888854
No 350
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=95.97 E-value=0.037 Score=62.32 Aligned_cols=58 Identities=17% Similarity=0.103 Sum_probs=42.8
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC---CCceeEEEEE
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH---QHVVRYYQAW 423 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H---pnIV~l~~~~ 423 (1170)
-.+.|+.|.+..+|+... ++..+++|+.... ....+.+|+..|+.|.. ..+++++...
T Consensus 40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~ 100 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIG 100 (312)
T ss_dssp EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEE
T ss_pred eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEe
Confidence 357899999999999875 4778999987532 24568899999998842 4566666543
No 351
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=95.79 E-value=0.092 Score=57.91 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=41.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 412 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~ 412 (1170)
...-++.+|.|..+.||+.... +|+.|++|+-+.... .....+.+|+..|+.|.
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~ 69 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAP--ALDGLFRAEALGLDWLG 69 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHT
T ss_pred CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHH
Confidence 3455788999999999999875 799999997653322 22345788999999884
No 352
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=95.75 E-value=0.022 Score=64.36 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=27.3
Q ss_pred CCccccCCCCCceeecCC----CCEEEeecCcchh
Q 001059 512 QGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKF 542 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~----~~vKL~DFGlA~~ 542 (1170)
..++|+|+.+.|||++.+ +.+.|.||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 469999999999999875 6799999999874
No 353
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=95.55 E-value=0.025 Score=63.40 Aligned_cols=50 Identities=6% Similarity=0.020 Sum_probs=31.1
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H 413 (1170)
..++.|+.|....+|++... +..+++|+..... . ...+..|+.+++.+..
T Consensus 25 ~~~~~i~~G~~n~~~~v~~~--~g~~vlk~~~~~~-~---~~~l~~e~~~l~~L~~ 74 (322)
T 2ppq_A 25 TSYKGIAEGVENSNFLLHTT--KDPLILTLYEKRV-E---KNDLPFFLGLMQHLAA 74 (322)
T ss_dssp EEEEEECC---EEEEEEEES--SCCEEEEEECC-------CCHHHHHHHHHHHHHH
T ss_pred eEeeccCCCcccceEEEEeC--CccEEEEEeCCCC-C---HHHHHHHHHHHHHHHH
Confidence 34577888998999998764 3368899886421 1 2345678888887743
No 354
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.42 E-value=0.07 Score=59.82 Aligned_cols=48 Identities=27% Similarity=0.306 Sum_probs=33.0
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H 413 (1170)
..|+ |....||++... +|+.+++|..+....+ ...+..|+.+++.+..
T Consensus 32 ~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~~~---~~~~~~E~~~~~~L~~ 79 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDE-DRRRFVVKFYRPERWT---ADQILEEHQFALQLVN 79 (328)
T ss_dssp EEEC-CSSSEEEEECCT-TCCCEEEEEECTTTSC---HHHHHHHHHHHHHHHH
T ss_pred Eeec-CcccceEEEEcC-CCCEEEEEEcCCCCCC---HHHHHHHHHHHHHHHH
Confidence 4566 778899987653 5668999998633222 3456778888888853
No 355
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.24 E-value=0.041 Score=63.11 Aligned_cols=28 Identities=29% Similarity=0.429 Sum_probs=24.2
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcch
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAK 541 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~ 541 (1170)
.++|+|+++.|||++.++ +.|+||..|.
T Consensus 213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 213 VFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 589999999999998654 8999999886
No 356
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.20 E-value=0.063 Score=62.09 Aligned_cols=60 Identities=13% Similarity=0.135 Sum_probs=34.5
Q ss_pred eeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCC-ceeEEEEE
Q 001059 361 QPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH-VVRYYQAW 423 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~-------tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hpn-IV~l~~~~ 423 (1170)
+.|..|-...+|++.... +++.|++|+... .. .....+.+|..+++.+..-+ ..++++.+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~--~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~ 123 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA--IL-QGVDSLVLESVMFAILAERSLGPQLYGVF 123 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC--cc-chHHHHHHHHHHHHHHHhcCCCCeEEEEc
Confidence 567778888899988742 357899998532 11 12345679999998885333 34566544
No 357
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.00 E-value=0.15 Score=59.95 Aligned_cols=61 Identities=11% Similarity=0.264 Sum_probs=41.6
Q ss_pred EEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCc-eeEEEEE
Q 001059 359 ELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV-VRYYQAW 423 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~-------tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnI-V~l~~~~ 423 (1170)
.++.|+.|-...||++.... ++..|++|+.... .. ...+.+|..+++.+...++ .++++.+
T Consensus 77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~---~~~li~E~~~l~~L~~~g~~P~l~~~~ 145 (429)
T 1nw1_A 77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ET---ESHLVAESVIFTLLSERHLGPKLYGIF 145 (429)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CC---HHHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence 35678889999999998752 2578999987421 11 1456689999998854444 4566554
No 358
>2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B*
Probab=94.86 E-value=0.1 Score=65.97 Aligned_cols=103 Identities=16% Similarity=0.096 Sum_probs=74.8
Q ss_pred hhhHHhHHHHHHHHcCCccccccceeccCCCcc--cccc-eEEEeccCC-ceeeecCCCCHHHHHHHHhC---CCCceeE
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQ--FKRN-TVKLLTHGG-DLLELSHELRLPFIRWAISN---QKSSFKR 801 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~--~~~~-my~f~D~~G-~~laLRPD~T~~iaR~~~~~---~~~P~r~ 801 (1170)
.+.+.+.+++.+...||+|+.|..|.-...... .... .+++.++-. +.-+||+.+.+.+.+.++.| +..|+|+
T Consensus 495 ~~~~~~~ir~~L~~~Gf~Evitysfvs~~~~~~l~~~~~~~v~L~NPis~e~svLRtsLlpgLL~~l~~N~~r~~~~vrl 574 (795)
T 2rhq_B 495 RQHKTRTLKETLEGAGLNQAITYSLVSKDHAKDFALQERPTISLLMPMSEAHATLRQSLLPHLIEATAYNVARKNKDVRL 574 (795)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEECTTTTTTTCSSCCCCEECSSCSCTTSSEECSCSHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEecCCccCHHHHHhhCCCCCceEEEcCCCchhhhhhhhccHHHHHHHHHHHhcCCCCCeEE
Confidence 446788899999999999999999822211100 1234 577777764 45589999999999998874 3569999
Q ss_pred EEecCeEEcCCCCCCCCceeEeEEEEeCCC
Q 001059 802 YEISSVYRRAIGHSPPNRYLQGDFDIIGGA 831 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~ 831 (1170)
|.+|+|||.+.......|++|+++=+.|..
T Consensus 575 FEiG~Vf~~d~~~~~~~e~~~la~l~~G~~ 604 (795)
T 2rhq_B 575 YEIGRVFFGNGEGELPDEVEYLSGILTGEY 604 (795)
T ss_dssp EEEEEEEECCCTTSCCEEEEEEEEEEESEE
T ss_pred EEEeeEEecCCcccCcchhhEEEEEEEecc
Confidence 999999995322101267999999888853
No 359
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=94.25 E-value=0.35 Score=57.32 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=39.6
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCc-eeEEEEE
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV-VRYYQAW 423 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnI-V~l~~~~ 423 (1170)
.++.|+.|-...+|++.....+..|++|+....... . -...+|..+++.|...++ .++++.+
T Consensus 112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~--~-idR~~E~~vl~~L~~~gl~P~ll~~~ 174 (458)
T 2qg7_A 112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE--I-INREREKKISCILYNKNIAKKIYVFF 174 (458)
T ss_dssp EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS--C-SCHHHHHHHHHHHTTSSSBCCEEEEE
T ss_pred EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh--h-cCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 356788899999999987643578999987432111 1 112579999999965555 4566554
No 360
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=93.75 E-value=0.26 Score=55.88 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=27.7
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
..++|+|+.+.|||++.++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3589999999999999888899999998864
No 361
>1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 3teh_B* 2iy5_B*
Probab=93.27 E-value=0.2 Score=63.06 Aligned_cols=95 Identities=13% Similarity=0.018 Sum_probs=72.7
Q ss_pred hhhHHhHHHHHHHHcCCccccccceeccC---CCcccccceEEEeccCC-ceeeecCCCCHHHHHHHHhC---C-CCcee
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG---DCPQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISN---Q-KSSFK 800 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~~~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~~~~---~-~~P~r 800 (1170)
.+.+.+.+++.+...||+|+.|-.|.-.. .... ....+++.++-. +.-+||+.+.+.+.+.++.| + ..|+|
T Consensus 491 ~~~~~~~ir~~L~~~Gf~Evitysfvs~~~~~~l~~-~~~~v~L~NPis~d~svLRtsLlpgLL~~l~~N~~r~~~~~vr 569 (785)
T 1b7y_B 491 PYRKEQRLREVLSGLGFQEVYTYSFMDPEDARRFRL-DPPRLLLLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERAL 569 (785)
T ss_dssp HHHHHHHHHHHHHHHTCEECCCCSEECTTHHHHTTC-CCCSCEESSCSSTTSSEECSCSHHHHHHHHHHHHHHSCCSCEE
T ss_pred HHHHHHHHHHHHHHCCCEEEecCcccCHHHHHhcCC-CCCeEEEcCCCchhhhhhhhhhHHHHHHHHHHHhhcCCCCCeE
Confidence 44678889999999999999999882211 1110 234466777664 44589999999999998875 4 57999
Q ss_pred EEEecCeEEcCCCCCCCCceeEeEEEEeCCC
Q 001059 801 RYEISSVYRRAIGHSPPNRYLQGDFDIIGGA 831 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~ 831 (1170)
+|.+|+||| + .|+.|+++=+.|..
T Consensus 570 lFEiG~Vf~-~------~e~~~lagl~~G~~ 593 (785)
T 1b7y_B 570 LFEVGRVFR-E------REETHLAGLLFGEG 593 (785)
T ss_dssp EEEEEEEES-S------SEEEEEEEEEESSC
T ss_pred EEEEeeeec-c------ChhhEEEEEEECCC
Confidence 999999999 2 78999999999964
No 362
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.48 E-value=0.97 Score=52.46 Aligned_cols=29 Identities=21% Similarity=0.298 Sum_probs=26.4
Q ss_pred CccccCCCCCceeecCC------CCEEEeecCcch
Q 001059 513 GIIHRDLTPNNIFFDAR------NDIKIGDFGLAK 541 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~------~~vKL~DFGlA~ 541 (1170)
.++|+|+.+.|||++.+ +.+.|+||..|.
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 48999999999999877 789999999886
No 363
>3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* 3teg_A* 3tup_A
Probab=90.59 E-value=0.92 Score=52.80 Aligned_cols=91 Identities=14% Similarity=0.023 Sum_probs=61.0
Q ss_pred hhHHhHHHHHHHHc--------CCccccc-cce-----ec--cCC--Ccc--cccceEEEeccCCceeeecCCCCHHHHH
Q 001059 730 DYVVQVTKEMFRQH--------CAKHLEI-EPM-----YL--LGD--CPQ--FKRNTVKLLTHGGDLLELSHELRLPFIR 789 (1170)
Q Consensus 730 ~~I~~~i~~~f~~~--------Gy~~I~t-P~~-----~~--~~~--~~~--~~~~my~f~D~~G~~laLRPD~T~~iaR 789 (1170)
..+.+.++++|... ||+++.+ |.+ .| +.. ... .....|.+. +..+||.-.++..+|
T Consensus 51 ~~~~~~i~~~f~~~~~~~~g~~Gf~e~~~~~~v~s~~~NFd~L~~p~dHpaR~~~Dtfyi~----~~~vLRThts~~~~~ 126 (415)
T 3cmq_A 51 WLIKERVKEHFYKQYVGRFGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLN----RTHMLRAHTSAHQWD 126 (415)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSCCCEEECCCCSEEEHHHHTGGGTCCTTCGGGCGGGSCBSS----SSEEECSSGGGGHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCCcEEEcCCCccccHHHHHHHhCCCCCCCcccccceEEec----CCeEEcCCCcHHHHH
Confidence 45667777777666 9999998 666 11 111 111 113445442 457999999999999
Q ss_pred HHHhCCCCceeEEEecCeEEcCC-CCCCCCceeEeE-EEE
Q 001059 790 WAISNQKSSFKRYEISSVYRRAI-GHSPPNRYLQGD-FDI 827 (1170)
Q Consensus 790 ~~~~~~~~P~r~~Y~g~VfR~e~-~~~~~~ef~Q~G-vEi 827 (1170)
.+..+ .| |++..|.|||++. .......|+|.. +-+
T Consensus 127 ~l~~~--~~-k~~~~G~VyR~D~~da~h~n~fhQ~egv~l 163 (415)
T 3cmq_A 127 LLHAG--LD-AFLVVGDVYRRDQIDSQHYPIFHQLEAVRL 163 (415)
T ss_dssp HHHTT--CS-EEEEEEEEECCCCCBTTBCSEEEEEEEEEE
T ss_pred HHHHC--CC-CEEEeeeEEeccchhhhhhHHhcCCCcEEE
Confidence 98765 35 9999999999863 345566787765 444
No 364
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=89.14 E-value=0.72 Score=54.00 Aligned_cols=29 Identities=28% Similarity=0.555 Sum_probs=26.1
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
.++|+|+.+.||+ +.++.+.|+||..|..
T Consensus 263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 4899999999999 7788999999999874
No 365
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=85.32 E-value=2.2 Score=49.41 Aligned_cols=29 Identities=21% Similarity=0.488 Sum_probs=25.1
Q ss_pred ccccCCCCCceee------cCCCCEEEeecCcchh
Q 001059 514 IIHRDLTPNNIFF------DARNDIKIGDFGLAKF 542 (1170)
Q Consensus 514 IiHrDLKp~NILi------~~~~~vKL~DFGlA~~ 542 (1170)
++|+|+.+.|||+ +.+..+.++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 6899999999999 3456799999999874
No 366
>3pco_B Phenylalanyl-tRNA synthetase, beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli}
Probab=83.94 E-value=1.9 Score=54.40 Aligned_cols=120 Identities=8% Similarity=-0.059 Sum_probs=80.9
Q ss_pred hHHhHHHHHHHHcCCccccccceeccC---C-CcccccceEEEeccCCc-eeeecCCCCHHHHHHHHhCC---CCceeEE
Q 001059 731 YVVQVTKEMFRQHCAKHLEIEPMYLLG---D-CPQFKRNTVKLLTHGGD-LLELSHELRLPFIRWAISNQ---KSSFKRY 802 (1170)
Q Consensus 731 ~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~-~~~~~~~my~f~D~~G~-~laLRPD~T~~iaR~~~~~~---~~P~r~~ 802 (1170)
...+.+++.+...||.|+.|-.|.-.. . + ..++..++.++-.. .=+||+.+-+.+...++.|. ..++|+|
T Consensus 493 ~~~~~~r~~l~~~G~~Evitysf~~~~~~~~~~--~~~~~v~l~NPis~e~svmRtsLlpgLL~~~~~N~~r~~~~v~lF 570 (795)
T 3pco_B 493 LSLKRVKTLLNDKGYQEVITYSFVDPKVQQMIH--PGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIF 570 (795)
T ss_dssp CCHHHHHHHHHHTTCEECCCCSEECHHHHHHHS--SSCCCCBCSSCSCSTTCEECSSSHHHHHHHHHHHHTSSCCCCEEE
T ss_pred HHHHHHHHHHHHCCCeeeeccCcCCHHHHHhhC--CCCCeEEEcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCccEE
Confidence 356678889999999999999982111 1 1 12344566776654 44899999999999888743 3479999
Q ss_pred EecCeEEcCCC-CCCCCceeEeEEEEeCCCC--------cccHH-HHHHHHHHHHHHcCC
Q 001059 803 EISSVYRRAIG-HSPPNRYLQGDFDIIGGAS--------ALTEA-EVLKVTMDIVTRFFH 852 (1170)
Q Consensus 803 Y~g~VfR~e~~-~~~~~ef~Q~GvEiiG~~~--------~~aDa-Evi~la~~~l~~lgi 852 (1170)
.+|+||+.... ..+..|...+++=+.|... ...|. ++-.++..++..+|+
T Consensus 571 EiG~Vf~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~dF~dlKg~ve~ll~~lg~ 630 (795)
T 3pco_B 571 ESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESVLDLTGK 630 (795)
T ss_dssp EEEEEEEECTTSSTTEEEEEEEEEEEESBSSCSCSSSCCCBCCHHHHHHHHHHHTTTSSC
T ss_pred EeeeEEecCCCcccCcchhheEEEEEECCCcccccccCCCCCCHHHHHHHHHHHHHHcCC
Confidence 99999996432 2344567777777777532 23454 455555566666665
No 367
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=74.89 E-value=0.19 Score=59.64 Aligned_cols=61 Identities=7% Similarity=-0.098 Sum_probs=15.8
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEE------EEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEe
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAV------KKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWF 424 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAV------K~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~ 424 (1170)
+.|| ||.||++.+.....+||| |..+....+......+.+|..+++.++|||+++.|+.-.
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3455 999999999765568898 765433333334456888999999999999999876543
No 368
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A
Probab=62.70 E-value=3.7 Score=48.08 Aligned_cols=18 Identities=17% Similarity=0.226 Sum_probs=15.8
Q ss_pred CCceEEeccHHHHHhhcc
Q 001059 1036 PSGVGASLALETIIQHYP 1053 (1170)
Q Consensus 1036 ~pAvGfaiglerL~~~L~ 1053 (1170)
.|+.|||+|+|||+.+|.
T Consensus 397 PP~~G~glGiDRLvmll~ 414 (434)
T 1x54_A 397 VPHSGFGLGVERLVAWVL 414 (434)
T ss_dssp CCEEEEEEEHHHHHHHHT
T ss_pred CCceEEEEcHHHHHHHHc
Confidence 489999999999987765
No 369
>1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii}
Probab=61.21 E-value=4.2 Score=47.46 Aligned_cols=18 Identities=17% Similarity=0.392 Sum_probs=15.8
Q ss_pred CCceEEeccHHHHHhhcc
Q 001059 1036 PSGVGASLALETIIQHYP 1053 (1170)
Q Consensus 1036 ~pAvGfaiglerL~~~L~ 1053 (1170)
.|+.|||+|+|||+.+|.
T Consensus 392 PP~~G~glGiDRLvmll~ 409 (429)
T 1wyd_A 392 PPHAGFGMGLARLMVMLT 409 (429)
T ss_dssp CCEEEEEEEHHHHHHHHH
T ss_pred CCceEEEEcHHHHHHHHc
Confidence 489999999999987764
No 370
>3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A
Probab=51.70 E-value=7.5 Score=45.72 Aligned_cols=56 Identities=14% Similarity=0.097 Sum_probs=36.6
Q ss_pred EEEEEeccCCCcccccccceeccc----cccchhhhhccccc--------ccccCCCCCCCCceEEeccHHHHHhhcc
Q 001059 988 FFQVFSVKEKYPATLVEGTLLAVG----GRYDYLLHRMWDRE--------YVGYASRTNPPSGVGASLALETIIQHYP 1053 (1170)
Q Consensus 988 VFe~~~~~~~~~~~~~~~~~I~~G----GRYD~L~~~fg~~~--------~~~~~g~~~~~pAvGfaiglerL~~~L~ 1053 (1170)
-|++|..|.+ .|++| -+|+.|.++|-... ++..+--+. .|.-||+||+|||+.++.
T Consensus 369 rfdL~~~G~g---------Ei~~G~~r~~d~~~l~~r~~~~g~~~~~~~~yld~~~~G~-pP~gG~GlGidRLvm~lt 436 (456)
T 3m4p_A 369 SVDLLMPGVG---------EIVGGSMRIWNYDELMGAYKANGLNPDPYYWYTQQRKYGS-CPHGGYGLGVERLVMWLL 436 (456)
T ss_dssp EEEEEETTTE---------EEEEEEEBCCCHHHHHHHHHTTTCCCGGGHHHHGGGTSSC-CCEEEEEEEHHHHHHHHH
T ss_pred EEEEEeCCce---------EEccceeecCCHHHHHHHHHHcCCCHHHHHHHHHHHHcCC-CcccEEEEcHHHHHHHHc
Confidence 5899987644 47877 57888888773210 011111122 578899999999987764
No 371
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=47.88 E-value=12 Score=36.73 Aligned_cols=27 Identities=15% Similarity=0.191 Sum_probs=23.5
Q ss_pred EEEEEEEeCCCCCCCCCceeeecCCCC
Q 001059 9 SALLLVRCLPGYPYKCPKLQITPEKGL 35 (1170)
Q Consensus 9 ~~~l~~~~~~~yp~~~p~~~i~~~~~~ 35 (1170)
.+.|.|.+|++||..||.+.+...++.
T Consensus 86 eFkLefdiP~tYP~tPPeI~Fp~ldgk 112 (168)
T 3kpa_A 86 EFEMNFDIPVTYPQAPPEIALPELEGK 112 (168)
T ss_dssp EEEEEEECCTTTTTSCCCCBCGGGTTT
T ss_pred EEEEEEeCCccCCCCCCEeecccccCc
Confidence 688999999999999999999776543
No 372
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=44.52 E-value=14 Score=37.08 Aligned_cols=24 Identities=13% Similarity=0.169 Sum_probs=21.8
Q ss_pred EEEEEEEeCCCCCCCCCceeeecC
Q 001059 9 SALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 9 ~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
.+.|.|.++++||..||.+.+.+.
T Consensus 84 ~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 84 EFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp EEEEEEECCTTTTTSCCCCBCGGG
T ss_pred EEEEEEECCCCCCCCCCeeeeCCC
Confidence 678999999999999999999665
No 373
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=42.46 E-value=16 Score=35.43 Aligned_cols=25 Identities=28% Similarity=0.509 Sum_probs=21.7
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.+.++++||.+||.+.....
T Consensus 71 G~f~l~i~fp~~YP~~PP~v~F~T~ 95 (136)
T 2a7l_A 71 EKFQLLFKFSSRYPFDSPQVMFTGE 95 (136)
T ss_dssp CEEEEEEEECTTTTTSCCEEEEESS
T ss_pred EEEEEEEECCCCCCCCCCEEEEeCC
Confidence 4578899999999999999998764
No 374
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=36.42 E-value=19 Score=36.82 Aligned_cols=24 Identities=17% Similarity=0.308 Sum_probs=21.1
Q ss_pred EEEEEEEeCCCCCCCCCceeeecC
Q 001059 9 SALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 9 ~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
.+.|.+.++++||.+||.+.+...
T Consensus 90 ~f~l~i~fp~~YP~~PP~V~f~tp 113 (186)
T 1zuo_A 90 YILLNFSFKDNFPFDPPFVRVVLP 113 (186)
T ss_dssp SEEEEEECCTTTTSSCCEEEEEES
T ss_pred EEEEEEECCCCCCCCCCeEEEeCC
Confidence 478899999999999999998664
No 375
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=34.73 E-value=24 Score=37.09 Aligned_cols=69 Identities=10% Similarity=0.066 Sum_probs=49.3
Q ss_pred ccEEEEEeeccCC--cHHHHHHhcCCCCHHHHHHHHHHHHHHHH-HHHhCCccccCCCCCceeecCCCCEEEeecCcc
Q 001059 466 STYLYIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVEGLA-HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA 540 (1170)
Q Consensus 466 ~~~l~iVmEy~~g--sL~~~l~~~~~l~e~~~~~i~~qI~~gL~-yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA 540 (1170)
.+.+.+.++.-++ ++..+ ..++....++++.+|+.... ++++ -+|--|.|+||+++.++.++|.=.|+-
T Consensus 60 eD~~~i~y~~~~~~~~f~~i----~~~~~~eKlrll~nl~~L~~~~~~~--r~tf~l~P~NL~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 60 EDEVKVVIKPPSSFLTFAAI----RKTTLLSRIRAAIHLVSKVKHHSAR--RLIFIVCPENLMFNRALEPFFLHVGVK 131 (219)
T ss_dssp SSEEEEEEECCTTCEEHHHH----HTSCHHHHHHHHHHHHHHHSSCCSS--SEECCCCGGGEEECTTCCEEESCCEET
T ss_pred CCEEEEEEEcCcccCcHHHH----HhcCHHHHHHHHHHHHHHHHHhhhC--ceeEEEeCceEEEeCCCcEEEEEcCCc
Confidence 3445555555432 44433 34788999999999888776 5543 477889999999999999999866653
No 376
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=34.62 E-value=43 Score=27.29 Aligned_cols=33 Identities=18% Similarity=0.105 Sum_probs=30.4
Q ss_pred CceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCe
Q 001059 25 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60 (1170)
Q Consensus 25 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~ 60 (1170)
|.+.|.- .+.++++..+|.+.|.+.+.+.| |.+
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~~~~~l--g~~ 33 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSVAAEIY--GMD 33 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHHHHHHH--TCC
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHHHHHHh--CcC
Confidence 7888988 89999999999999999999999 865
No 377
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=34.10 E-value=25 Score=33.49 Aligned_cols=25 Identities=20% Similarity=0.182 Sum_probs=21.8
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...+.+.++++||.+||.+.....
T Consensus 53 g~f~~~i~fp~~YP~~PP~v~f~t~ 77 (125)
T 2fo3_A 53 EVYKLKIIFPDDYPLKPPIVYFLQK 77 (125)
T ss_dssp CEEEEEEECCTTTTTSCCEEEECSS
T ss_pred CEEEEEEEcCCCCCCCCCEEEEeCC
Confidence 3578899999999999999998764
No 378
>3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica}
Probab=33.36 E-value=17 Score=43.65 Aligned_cols=56 Identities=20% Similarity=0.342 Sum_probs=34.7
Q ss_pred eEEEEEeccCCCcccccccceecccc----ccchhhhhcccc--------cccccCCCCCCCCceEEeccHHHHHhhcc
Q 001059 987 LFFQVFSVKEKYPATLVEGTLLAVGG----RYDYLLHRMWDR--------EYVGYASRTNPPSGVGASLALETIIQHYP 1053 (1170)
Q Consensus 987 ~VFe~~~~~~~~~~~~~~~~~I~~GG----RYD~L~~~fg~~--------~~~~~~g~~~~~pAvGfaiglerL~~~L~ 1053 (1170)
--|++|..| + .|++|+ +|+.|.++|-.. .++..+.-|. .|+-||+||+|||+.++.
T Consensus 461 ~rFDL~i~G-~---------Ei~nG~~rl~Dp~~~~~R~~~~G~d~~~~e~yl~al~yG~-PPhgG~GlGiDRLvMllt 528 (548)
T 3i7f_A 461 NSYDVFVRG-Q---------EITSGAQRIHDPEFLMKRCIEKGVDPATLKDYIESFRFGS-WPHAGCGIGLERITMLYL 528 (548)
T ss_dssp SEEEEEETT-E---------EEEEEEEECCCHHHHHHHHHHTTCCGGGGHHHHHTTSSCC-CCEEEEEEEHHHHHHHHT
T ss_pred EEEEEEECC-E---------EEeeCeeecCCHHHHHHHHHHcCCChHHHHHHHHHHhCCC-CCceEEEEcHHHHHHHHh
Confidence 368888865 2 477775 466666665211 1122222233 588899999999987764
No 379
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=32.87 E-value=26 Score=33.87 Aligned_cols=25 Identities=16% Similarity=0.170 Sum_probs=21.8
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...+.+.++++||.+||.+.....
T Consensus 67 g~f~~~i~fp~~YP~~PP~v~f~t~ 91 (136)
T 2h2y_A 67 EVYKIKIIFPDNYPLKPPIVYFLQK 91 (136)
T ss_dssp CEEEEEEECCTTTTTSCCEEEECSS
T ss_pred CEEEEEEEeCCCCCCCCCEEEEeCC
Confidence 4578899999999999999998764
No 380
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=32.85 E-value=25 Score=34.50 Aligned_cols=25 Identities=28% Similarity=0.479 Sum_probs=21.7
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
-...|.+.++++||.+||.+.....
T Consensus 51 g~f~~~i~fp~~YP~~PP~v~f~t~ 75 (150)
T 1z2u_A 51 GVFFLTIHFPTDYPFKPPKVAFTTR 75 (150)
T ss_dssp CEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CEEEEEEECCCCCCCCCcEEEEecC
Confidence 3578899999999999999998765
No 381
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=32.70 E-value=26 Score=34.37 Aligned_cols=25 Identities=20% Similarity=0.226 Sum_probs=21.9
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...+.+.++++||.+||.+.....
T Consensus 48 g~f~~~i~fp~~YP~~PP~v~f~t~ 72 (149)
T 2r0j_A 48 GTYKLELFLPEQYPMEPPKVRFLTK 72 (149)
T ss_dssp CEEEEEEECCTTTTTSCCEEEECSC
T ss_pred CEEEEEEeCCcccCCCCCeeEeccC
Confidence 4678899999999999999998765
No 382
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=32.42 E-value=26 Score=34.37 Aligned_cols=25 Identities=24% Similarity=0.418 Sum_probs=21.6
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.+.++++||.+||.+.....
T Consensus 49 g~f~~~i~fp~~YP~~PP~v~f~t~ 73 (149)
T 1fxt_A 49 GKFVVDIEVPMEYPFKPPKMQFDTK 73 (149)
T ss_dssp SEEEEEEECCTTTTSSCCEEEESSC
T ss_pred cEEEEEEECCCCCCCCCCEEEEeCC
Confidence 3578899999999999999998763
No 383
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=32.37 E-value=26 Score=35.35 Aligned_cols=25 Identities=20% Similarity=0.273 Sum_probs=21.8
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.+.++++||.+||.+.....
T Consensus 65 G~f~~~i~fp~~YP~~PP~v~F~T~ 89 (172)
T 2awf_A 65 GVFKAHLTFPKDYPLRPPKMKFITE 89 (172)
T ss_dssp CEEEEEEECCTTTTSSCCEEEECSC
T ss_pred cEEEEEEECCcccCCCCCcccccCC
Confidence 3578899999999999999998765
No 384
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=32.35 E-value=27 Score=34.57 Aligned_cols=25 Identities=20% Similarity=0.263 Sum_probs=22.0
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.+.++++||.+||.+.....
T Consensus 52 g~f~~~i~fp~~YP~~PP~v~f~t~ 76 (154)
T 2c2v_B 52 GTFKLELFLPEEYPMAAPKVRFMTK 76 (154)
T ss_dssp CEEEEEEECCTTTTSSCCEEEECSC
T ss_pred CeEEEEEEcCCCCCCCCCEEEeecC
Confidence 3578899999999999999998875
No 385
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=32.32 E-value=26 Score=34.81 Aligned_cols=25 Identities=20% Similarity=0.384 Sum_probs=21.7
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
-...+.+.++++||.+||.+.....
T Consensus 58 g~f~~~i~fp~~YP~~PP~v~f~t~ 82 (159)
T 2bep_A 58 GRYQLEIKIPETYPFNPPKVRFITK 82 (159)
T ss_dssp CEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CEEEEEEeCCCcCCCCCCEEEeeCC
Confidence 3578899999999999999998764
No 386
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=32.30 E-value=26 Score=35.11 Aligned_cols=25 Identities=28% Similarity=0.483 Sum_probs=21.7
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.+.++++||.+||.+.....
T Consensus 68 G~f~l~i~fp~~YP~~PP~V~F~T~ 92 (166)
T 2ayv_A 68 GVFFLNIHFPSDYPFKPPKVNFTTK 92 (166)
T ss_dssp CEEEEEEECCTTTTSSCCEEEECSC
T ss_pred CEEEEEEeCCCcCCCCCceeeeccC
Confidence 3578899999999999999998764
No 387
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=32.23 E-value=27 Score=34.44 Aligned_cols=25 Identities=20% Similarity=0.303 Sum_probs=21.7
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
-...+.+.++++||.+||.+.....
T Consensus 51 g~f~~~i~fp~~YP~~PP~v~f~t~ 75 (152)
T 2aak_A 51 GTFKLSLQFSEDYPNKPPTVRFVSR 75 (152)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CEEEEEEECCCCCCCCCCEEEEecC
Confidence 4578899999999999999998764
No 388
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=32.18 E-value=41 Score=27.01 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=30.6
Q ss_pred CceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCe
Q 001059 25 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60 (1170)
Q Consensus 25 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~ 60 (1170)
|.++|...+|.++++..+|.+.|.+.+.+.| |.+
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~~l--g~p 34 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMANSL--DAP 34 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHH--TCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHh--CcC
Confidence 7888888889999999999999999999998 764
No 389
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=31.82 E-value=27 Score=34.63 Aligned_cols=25 Identities=20% Similarity=0.329 Sum_probs=21.9
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.+.++++||.+||.+.....
T Consensus 72 G~f~l~i~fp~~YP~~PP~v~F~t~ 96 (156)
T 2q0v_A 72 RIYSLTIFCDDNYPDSPPTVKFDTK 96 (156)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cEEEEEEECCCcCCCCCCeEEEEcc
Confidence 3578899999999999999998875
No 390
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=31.69 E-value=28 Score=33.71 Aligned_cols=25 Identities=28% Similarity=0.479 Sum_probs=21.9
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.++++++||.+||.+.....
T Consensus 57 g~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 57 RIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESBC
T ss_pred eEEEEEEECCCCCCCCCCceEEEcc
Confidence 3578899999999999999998774
No 391
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=31.68 E-value=27 Score=34.63 Aligned_cols=26 Identities=12% Similarity=-0.060 Sum_probs=22.3
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecCC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPEK 33 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~~ 33 (1170)
=...|.+.++++||.+||.+.....-
T Consensus 60 g~f~~~i~fp~~YP~~PP~v~f~t~i 85 (158)
T 1zdn_A 60 GLFRMKLLLGKDFPASPPKGYFLTKI 85 (158)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cEEEEEEEcCCCCCCCCCEEEeccCc
Confidence 35788999999999999999987753
No 392
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=31.45 E-value=28 Score=34.39 Aligned_cols=25 Identities=20% Similarity=0.250 Sum_probs=21.8
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
-...|.+.++++||.+||.+.....
T Consensus 52 g~f~~~i~fp~~YP~~PP~v~f~t~ 76 (155)
T 1jat_A 52 GIFELELYLPDDYPMEAPKVRFLTK 76 (155)
T ss_dssp EEEEEEEECCTTTTTSCCEEEECSC
T ss_pred cEEEEEEEcCCCCCCCCCcceeecc
Confidence 4678899999999999999988764
No 393
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=31.32 E-value=44 Score=26.77 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=30.5
Q ss_pred CceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCe
Q 001059 25 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60 (1170)
Q Consensus 25 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~ 60 (1170)
|.++|...+|.++++..+|.+.|.+.+.+.| |.+
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~~l--g~~ 34 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKETT--GAS 34 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHH--CCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHh--CcC
Confidence 7888888889999999999999999999998 753
No 394
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=30.46 E-value=30 Score=34.69 Aligned_cols=25 Identities=28% Similarity=0.479 Sum_probs=21.8
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...+.+.++++||.+||.+.....
T Consensus 66 g~f~l~i~fp~~YP~~PP~v~F~T~ 90 (165)
T 2c4o_A 66 GVFFLTIHFPTDYPFKPPKVAFTTR 90 (165)
T ss_dssp CEEEEEEECCTTTTSSCCEEEECSC
T ss_pred ceEEEEEECCCcCCCCCCEEEEecC
Confidence 3578899999999999999998775
No 395
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=30.46 E-value=29 Score=34.56 Aligned_cols=25 Identities=24% Similarity=0.275 Sum_probs=20.9
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.+.++++||.+||.+.....
T Consensus 51 g~f~~~i~fp~~YP~~PP~v~f~t~ 75 (164)
T 3h8k_A 51 GVFPAILSFPLDYPLSPPKMRFTCE 75 (164)
T ss_dssp CEEEEEEECCTTTTSSCCEEEECSC
T ss_pred CEEEEEEECCCCCCCCCCEEEEcCC
Confidence 3467889999999999999987764
No 396
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=30.27 E-value=30 Score=34.60 Aligned_cols=25 Identities=28% Similarity=0.324 Sum_probs=21.2
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...+.+.++++||.+||.+.....
T Consensus 52 g~f~~~i~fp~~YP~~PP~v~f~t~ 76 (165)
T 2ucz_A 52 GVFNAKLEFPKDYPLSPPKLTFTPS 76 (165)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSC
T ss_pred cEEEEEEECCccCCCCCCEEEEeCC
Confidence 3578889999999999999988764
No 397
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=29.88 E-value=31 Score=34.03 Aligned_cols=24 Identities=17% Similarity=0.239 Sum_probs=21.1
Q ss_pred cEEEEEEEeCCCCCCCCCceeeec
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITP 31 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~ 31 (1170)
=...+.+.++++||.+||.+....
T Consensus 46 g~f~~~i~fp~~YP~~pP~v~f~t 69 (152)
T 2onu_A 46 GIWKVHVTLPDDYPFASPSIGFMN 69 (152)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESS
T ss_pred eEEEEEEcCcccCCCCCCeEEEec
Confidence 357889999999999999999876
No 398
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=29.55 E-value=48 Score=27.20 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=30.7
Q ss_pred CceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCe
Q 001059 25 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60 (1170)
Q Consensus 25 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~ 60 (1170)
|.+.|.-.+|.+++++.+|.+.|.+.+.+.| |.+
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~~l--g~p 34 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHETL--GTP 34 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHH--CCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHh--CcC
Confidence 7788888889999999999999999999999 864
No 399
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=29.50 E-value=36 Score=33.64 Aligned_cols=26 Identities=27% Similarity=0.420 Sum_probs=22.0
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecCC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPEK 33 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~~ 33 (1170)
-...+.+.++++||.+||.+.....-
T Consensus 56 g~f~~~i~fp~~YP~~PP~v~f~t~i 81 (156)
T 2e2c_A 56 LKYKLTLEFPSDYPYKPPVVKFTTPC 81 (156)
T ss_dssp CEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred cEEEEEEECCCCCCCCCCEEEEeCCc
Confidence 35788999999999999999987643
No 400
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=29.10 E-value=32 Score=33.90 Aligned_cols=24 Identities=21% Similarity=0.459 Sum_probs=20.8
Q ss_pred EEEEEEEeCCCCCCCCCceeeecC
Q 001059 9 SALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 9 ~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
...+.+.++++||.+||.+.....
T Consensus 50 ~f~~~i~fp~~YP~~PP~v~f~t~ 73 (154)
T 1c4z_D 50 AFRIEINFPAEYPFKPPKITFKTK 73 (154)
T ss_dssp CEEEEEECCTTTTTSCCEEEESSC
T ss_pred eEEEEEEeCCCCCCCCCEEEEeCC
Confidence 467889999999999999998764
No 401
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=29.07 E-value=32 Score=33.96 Aligned_cols=25 Identities=28% Similarity=0.513 Sum_probs=21.5
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...+.+.++++||.+||.+.....
T Consensus 51 g~f~~~i~fp~~YP~~PP~v~f~t~ 75 (155)
T 1wzv_A 51 KAFNLRISFPPEYPFKPPMIKFTTK 75 (155)
T ss_dssp EEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CEEEEEEECCCCCCCCCCcceeeCC
Confidence 3578899999999999999998764
No 402
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=29.02 E-value=33 Score=34.24 Aligned_cols=25 Identities=24% Similarity=0.401 Sum_probs=21.9
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.++++++||.+||.+.....
T Consensus 76 G~f~l~i~fp~~YP~~PP~v~F~T~ 100 (160)
T 2a4d_A 76 RIYSLKIECGPKYPEAPPFVRFVTK 100 (160)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESBC
T ss_pred eEEEEEEECCCcCCCCCcEEEEecC
Confidence 3578899999999999999998765
No 403
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=28.75 E-value=33 Score=33.74 Aligned_cols=25 Identities=24% Similarity=0.421 Sum_probs=21.4
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
-...|.+.++++||.+||.+.....
T Consensus 51 g~f~~~i~fp~~YP~~pP~v~f~t~ 75 (151)
T 4gpr_A 51 GLFFLDVHFPVDYPFKAPRVTFMTK 75 (151)
T ss_dssp CEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CEEEEEEECCCCCCCCcceeEEecC
Confidence 4578899999999999999987764
No 404
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=28.40 E-value=33 Score=34.84 Aligned_cols=26 Identities=23% Similarity=0.479 Sum_probs=22.1
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecCC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPEK 33 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~~ 33 (1170)
=...|.+.++++||.+||.+.....-
T Consensus 77 G~f~l~i~fp~~YP~~PP~V~F~T~i 102 (179)
T 1i7k_A 77 LRYKLSLEFPSGYPYNAPTVKFLTPC 102 (179)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred CEEEEEEECCCcCCCCCceEEEecCC
Confidence 45788999999999999999987643
No 405
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=28.12 E-value=34 Score=34.79 Aligned_cols=25 Identities=20% Similarity=0.283 Sum_probs=21.8
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.+.++++||.+||.+.....
T Consensus 68 G~f~l~i~fp~~YP~~PP~V~F~t~ 92 (179)
T 2z5d_A 68 GVWKVRVDLPDKYPFKSPSIGFMNK 92 (179)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CEEEEEeeCCCCCCCCCceEEEecC
Confidence 3578899999999999999998774
No 406
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=27.99 E-value=58 Score=26.91 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=30.6
Q ss_pred CceeeecCC---CCCHHHHHHHHHHHHHHHHhhhhCCCe
Q 001059 25 PKLQITPEK---GLTKSDADNLLCLLQDQANSNAREGRV 60 (1170)
Q Consensus 25 p~~~i~~~~---~~~~~~~~~l~~~l~~~~~enl~~gm~ 60 (1170)
|.++|.-.+ +.++++..+|.+.|.+.+.+.| |.+
T Consensus 1 P~i~I~~~~~~~grs~eqK~~l~~~lt~~l~~~l--g~p 37 (67)
T 3m21_A 1 PFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVL--NKN 37 (67)
T ss_dssp CEEEEEECCBTTBSCHHHHHHHHHHHHHHHHHHH--CCC
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH--CcC
Confidence 778888887 8999999999999999999999 864
No 407
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=27.71 E-value=34 Score=34.52 Aligned_cols=24 Identities=21% Similarity=0.409 Sum_probs=21.4
Q ss_pred cEEEEEEEeCCCCCCCCCceeeec
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITP 31 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~ 31 (1170)
=...+.+.++++||.+||.+....
T Consensus 65 g~f~~~i~fp~~YP~~PP~v~f~t 88 (172)
T 2y9m_A 65 HQFRILIEVPSSYPMNPPKISFMQ 88 (172)
T ss_dssp CEEEEEEECCTTTTTSCCEEEECT
T ss_pred CEEEEEEECCCcCCCCCCEEEEee
Confidence 357889999999999999999887
No 408
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=27.56 E-value=35 Score=34.27 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=21.5
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.+.++++||.+||.+.....
T Consensus 51 g~f~~~i~fp~~YP~~PP~v~f~t~ 75 (169)
T 1yh2_A 51 GVFKLEVIIPERYPFEPPQIRFLTP 75 (169)
T ss_dssp CEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CEEEEEEEeCCCCCCCCcEEEeecC
Confidence 3578899999999999999988765
No 409
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=27.35 E-value=35 Score=35.13 Aligned_cols=25 Identities=28% Similarity=0.501 Sum_probs=21.6
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=.+.|.|.++++||.+||.+.....
T Consensus 95 G~f~l~i~fp~~YP~~PP~V~F~T~ 119 (194)
T 3bzh_A 95 GVFFLDITFTPEYPFKPPKVTFRTR 119 (194)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CEEEEEEECCCcCCCCCccccccCC
Confidence 4578899999999999999988764
No 410
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=27.17 E-value=23 Score=37.09 Aligned_cols=68 Identities=15% Similarity=0.116 Sum_probs=48.7
Q ss_pred cEEEEEeeccC-C-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcc
Q 001059 467 TYLYIQMEYCP-R-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA 540 (1170)
Q Consensus 467 ~~l~iVmEy~~-g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA 540 (1170)
..+.+.++.-+ + ++.. -..++....++++.+|+....++++ =+|--|.|+||+++.++.+++.=.|+-
T Consensus 57 D~v~~~y~~~~~~~~f~~----ik~~~~~eKlr~l~ni~~l~~~~~~--r~tf~L~P~NL~f~~~~~p~i~~RGik 126 (215)
T 4ann_A 57 DSFQIHYDINDNHTPFDN----IKSFTKNEKLRYLLNIKNLEEVNRT--RYTFVLAPDELFFTRDGLPIAKTRGLQ 126 (215)
T ss_dssp SEEEEEECCCTTSEEGGG----GGGSCHHHHHHHHHHGGGGGGGGGS--SEECCCSGGGEEECTTSCEEESCCEET
T ss_pred cEEEEEEEcCcccCCHHH----HHhcCHHHHHHHHHHHHHHHHHhcC--ceEEEEecceEEEcCCCCEEEEEccCc
Confidence 34555555443 2 3333 2347889999999999988855544 378889999999999999999866653
No 411
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=27.03 E-value=37 Score=34.16 Aligned_cols=25 Identities=28% Similarity=0.362 Sum_probs=21.4
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.+.++++||.+||.+.....
T Consensus 51 G~f~l~i~fp~~YP~~PP~v~F~t~ 75 (169)
T 1ayz_A 51 GTFRLLLEFDEEYPNKPPHVKFLSE 75 (169)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CEEEEEEECcccCCCCCCccccccC
Confidence 3578899999999999999998764
No 412
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=26.89 E-value=32 Score=34.58 Aligned_cols=25 Identities=16% Similarity=0.255 Sum_probs=21.9
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...+.+.++++||.+||.+.....
T Consensus 70 G~f~l~i~fp~~YP~~PP~V~F~T~ 94 (169)
T 1yrv_A 70 LVFQLTIHFTSEYNYAPPVVKFITI 94 (169)
T ss_dssp CEEEEEEECCTTBTTBCCEEEESSC
T ss_pred eEEEEEEECCccCCCCCCcceecCC
Confidence 3578899999999999999998764
No 413
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=26.65 E-value=38 Score=33.65 Aligned_cols=25 Identities=20% Similarity=0.303 Sum_probs=21.5
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
-...+.+.++++||.+||.+.....
T Consensus 51 g~f~~~i~fp~~YP~~PP~v~f~t~ 75 (160)
T 1y8x_A 51 GKFVFSFKVGQGYPHDPPKVKCETM 75 (160)
T ss_dssp BCEEEEEECCTTTTTSCCEEEECSC
T ss_pred CEEEEEEeCCCcCCCCCCEEEEecC
Confidence 3477889999999999999998764
No 414
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=26.38 E-value=44 Score=33.21 Aligned_cols=25 Identities=24% Similarity=0.231 Sum_probs=21.5
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
-...|.+.++++||.+||.+.....
T Consensus 59 g~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 59 GLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp CEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CEEEEEEEcCcccCCCCCEEEEecC
Confidence 3477899999999999999998765
No 415
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=26.30 E-value=39 Score=33.77 Aligned_cols=25 Identities=28% Similarity=0.323 Sum_probs=21.3
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
-...|.+.++++||.+||.+.....
T Consensus 62 g~f~l~i~fp~~YP~~pP~v~F~t~ 86 (163)
T 3rcz_B 62 GLYKLTMAFPEEYPTRPPKCRFTPP 86 (163)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CEEEEEEECCCCCCCCCCEEEEeCC
Confidence 4577899999999999999987764
No 416
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=26.28 E-value=48 Score=27.92 Aligned_cols=34 Identities=21% Similarity=0.109 Sum_probs=30.9
Q ss_pred CceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCe
Q 001059 25 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60 (1170)
Q Consensus 25 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~ 60 (1170)
|.++|.-.++.+++++.+|.+.|.+.+.+.| |.+
T Consensus 2 P~I~I~~~~grs~eqK~~L~~~it~~l~~~l--g~p 35 (72)
T 3mb2_A 2 LLLRITMLEGRSTEQKAELARALSAAAAAAF--DVP 35 (72)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHHHHHHHH--TCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHh--CCC
Confidence 7788888889999999999999999999999 865
No 417
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=26.26 E-value=60 Score=25.87 Aligned_cols=35 Identities=17% Similarity=0.310 Sum_probs=31.4
Q ss_pred CCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCe
Q 001059 24 CPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60 (1170)
Q Consensus 24 ~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~ 60 (1170)
-|.++|....+.++++..+|.+.|.+.+.+-| |.+
T Consensus 3 MP~i~i~~~~g~s~e~k~~l~~~l~~~l~~~l--g~p 37 (63)
T 2x4k_A 3 MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTT--GAN 37 (63)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHHHHHHH--CCC
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHh--CcC
Confidence 48899998889999999999999999999998 764
No 418
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=26.09 E-value=43 Score=33.17 Aligned_cols=25 Identities=24% Similarity=0.272 Sum_probs=21.4
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
-...+.+.++++||.+||.+.....
T Consensus 56 g~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 56 GVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp BEEEEEEECCTTTTTSCCEEECCTT
T ss_pred eEEEEEEEcCCCCCCCCCeeeccCC
Confidence 3578899999999999999998763
No 419
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=26.09 E-value=39 Score=34.32 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=21.1
Q ss_pred EEEEEEEeCCCCCCCCCceeeecC
Q 001059 9 SALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 9 ~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
...+.+.++++||.+||.+.....
T Consensus 72 ~f~~~i~fp~~YP~~PP~v~F~t~ 95 (180)
T 2nvu_C 72 KFVFSFKVGQGYPHDPPKVKCETM 95 (180)
T ss_dssp CEEEEEECCTTTTTSCCEEEECSC
T ss_pred EEEEEEeCCCcCCCCCCcCceecc
Confidence 477889999999999999998765
No 420
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=26.08 E-value=38 Score=34.82 Aligned_cols=25 Identities=28% Similarity=0.489 Sum_probs=21.9
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.+.++++||.+||.+.....
T Consensus 92 G~f~l~i~fp~~YP~~PP~V~F~T~ 116 (193)
T 2f4z_A 92 GHFTLDIVIPPDYPYNPPKMKFVTK 116 (193)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CEEEEEEECCCcCCCCCCeEEEecC
Confidence 3578899999999999999998774
No 421
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=25.99 E-value=38 Score=35.54 Aligned_cols=29 Identities=21% Similarity=0.424 Sum_probs=23.9
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC---CCCC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE---KGLT 36 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~---~~~~ 36 (1170)
=...|.+.++++||.+||.+..... .|+.
T Consensus 70 G~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 101 (216)
T 2pwq_A 70 GHFTLAITIPNDYPYNPPKIKFVTKIWHPNIS 101 (216)
T ss_dssp CEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred eEEEEEEECCCcCCCCCCcccccCCCcCCCCc
Confidence 3578899999999999999998775 4554
No 422
>3qc5_X Platelet binding protein GSPB; carbohydrate/sugar binding, sugar binding protein; HET: GOL; 1.40A {Streptococcus gordonii} PDB: 3qc6_X 4i8e_X* 3qd1_X*
Probab=25.89 E-value=92 Score=34.46 Aligned_cols=45 Identities=13% Similarity=0.132 Sum_probs=37.0
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhh
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNA 55 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl 55 (1170)
-.+.|.+.|++.+|. +.+.+..+.+|+++|++++++.+++ ++-++
T Consensus 270 G~fklviKy~P~vP~--~KV~V~DPnnLTd~EKekVkeaVKk-ANpd~ 314 (360)
T 3qc5_X 270 GQFKLIIRFRIKTPE--NTVFVNNPNQLTEVEKNLVREAVKK-SNPDL 314 (360)
T ss_dssp TEEEEEEECCCCCCS--SCEEESCTTSCCHHHHHHHHHHHHH-HCTTC
T ss_pred ccEEEEEecCCCCCC--cceEecCcccCCHHHHHHHHHHHHH-hCCCc
Confidence 457777889999995 6788999999999999999999876 34444
No 423
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=25.68 E-value=49 Score=26.75 Aligned_cols=33 Identities=21% Similarity=0.219 Sum_probs=29.5
Q ss_pred CceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCC
Q 001059 25 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGR 59 (1170)
Q Consensus 25 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm 59 (1170)
|.++|....+.++++..+|.+.|.+.+.+.| |-
T Consensus 2 P~i~i~~~~g~s~eqk~~l~~~lt~~l~~~l--g~ 34 (64)
T 3abf_A 2 VVLKVTLLEGRPPEKKRELVRRLTEMASRLL--GE 34 (64)
T ss_dssp EEEEEEEETTCCHHHHHHHHHHHHHHHHHHT--TC
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHh--CC
Confidence 7788887788999999999999999999988 75
No 424
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=24.95 E-value=41 Score=34.22 Aligned_cols=24 Identities=17% Similarity=0.294 Sum_probs=20.5
Q ss_pred EEEEEEEeCCCCCCCCCceeeecC
Q 001059 9 SALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 9 ~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
...+.+.++++||.+||.+.....
T Consensus 56 ~f~~~i~fp~~YP~~PP~v~f~t~ 79 (183)
T 3rz3_A 56 YFKARLKFPIDYPYSPPAFRFLTK 79 (183)
T ss_dssp EEEEEEECCTTTTSSCCEEEESSC
T ss_pred eEEEEEECCCCCCCCCCeeEecCC
Confidence 467888999999999999987764
No 425
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=24.33 E-value=44 Score=34.20 Aligned_cols=25 Identities=12% Similarity=0.095 Sum_probs=21.9
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.+.++++||.+||.+.....
T Consensus 61 G~f~l~i~fP~~YP~~PP~v~f~T~ 85 (187)
T 2f4w_A 61 GYYHGKLIFPREFPFKPPSIYMITP 85 (187)
T ss_dssp CEEEEEEECCTTTTSSCCEEEECSC
T ss_pred CEEEEEEEcCCCCCCCCCcccccCC
Confidence 3577899999999999999998775
No 426
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=24.01 E-value=40 Score=33.73 Aligned_cols=24 Identities=13% Similarity=0.116 Sum_probs=20.4
Q ss_pred EEEEEEEeCCCCCCCCCceeeecC
Q 001059 9 SALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 9 ~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
...+.+.++++||.+||.+.....
T Consensus 62 ~f~~~i~fp~~YP~~pP~v~f~t~ 85 (167)
T 3fn1_B 62 KFQFETEVPDAYNMVPPKVKCLTK 85 (167)
T ss_dssp CEEEEEECCTTBTTBCCEEEECSC
T ss_pred EEEEEEECCCCCCCCCCeeEecCC
Confidence 467888999999999999987654
No 427
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=23.85 E-value=44 Score=34.51 Aligned_cols=23 Identities=22% Similarity=0.447 Sum_probs=17.3
Q ss_pred EEEEEEEeCCCCCCCCCceeeec
Q 001059 9 SALLLVRCLPGYPYKCPKLQITP 31 (1170)
Q Consensus 9 ~~~l~~~~~~~yp~~~p~~~i~~ 31 (1170)
...|.+.++++||.+||.+....
T Consensus 56 ~f~~~i~fp~~YP~~pP~v~f~t 78 (201)
T 3k9o_A 56 RYQLEIKIPETYPFNPPKVRFIT 78 (201)
T ss_dssp EEEEEEECCTTTTTSCCEEEESS
T ss_pred EEEEEEECCCcCCCCCCcccccc
Confidence 46677778888888888877665
No 428
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=23.78 E-value=46 Score=34.14 Aligned_cols=24 Identities=21% Similarity=0.188 Sum_probs=20.7
Q ss_pred EEEEEEEeCCCCCCCCCceeeecC
Q 001059 9 SALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 9 ~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
...+.+.++++||.+||.+.....
T Consensus 81 ~f~~~i~fp~~YP~~PP~v~f~t~ 104 (190)
T 3o2u_A 81 SINFNLDFNEVYPIEPPKVVCLKK 104 (190)
T ss_dssp CEEEEEECCTTTTTSCCEEEECSC
T ss_pred EEEEEEECCCCCCCCCceeEEecC
Confidence 467889999999999999988764
No 429
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=23.50 E-value=47 Score=33.45 Aligned_cols=25 Identities=24% Similarity=0.460 Sum_probs=21.4
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
=...|.+.++++||.+||.+.....
T Consensus 55 g~f~~~i~fp~~YP~~PP~v~F~t~ 79 (171)
T 1yf9_A 55 GTWMLHVQLPSDYPFKSPSIGFCNR 79 (171)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSC
T ss_pred ceEEEEEEcCCCCCCCCCeEEeecC
Confidence 3578899999999999999987753
No 430
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=23.41 E-value=50 Score=33.00 Aligned_cols=25 Identities=20% Similarity=0.242 Sum_probs=21.5
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
-...+.+.++++||.+||.+.....
T Consensus 69 g~f~~~i~fp~~YP~~pP~v~f~t~ 93 (167)
T 4ds2_A 69 NTYQLSVLFSDDYPHEPPTVRFVTP 93 (167)
T ss_dssp CEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CEEEEEEECCCCCCCCCCEEEEeCC
Confidence 4577899999999999999988764
No 431
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=22.92 E-value=3.1e+02 Score=27.56 Aligned_cols=57 Identities=7% Similarity=0.051 Sum_probs=42.6
Q ss_pred eEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeC-CCCCHHHHHHHHHh---CCCcEEEEE
Q 001059 1066 SVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV-PDPSLTEQYEYASE---HDIKCLVIL 1123 (1170)
Q Consensus 1066 ~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~-~~~~l~k~~~~A~~---~gi~~~iii 1123 (1170)
.|.|+..+ .+.+..+.+.+..|+.-|+.+++... ..|.+.+-.+|++. +|++-+|.+
T Consensus 14 ~V~IimGS-~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~ 74 (174)
T 3kuu_A 14 KIAIVMGS-KSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGLHVIIAG 74 (174)
T ss_dssp CEEEEESS-GGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEE
T ss_pred cEEEEECc-HHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEE
Confidence 46666654 77889999999999999999886443 36888888888754 788844443
No 432
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=22.85 E-value=73 Score=27.22 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=31.2
Q ss_pred CceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCe
Q 001059 25 PKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60 (1170)
Q Consensus 25 p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~ 60 (1170)
|.++|.-.+|.++++..+|.+.|.+.+.+.+ |.+
T Consensus 2 P~I~I~~~~Grs~eqK~~L~~~it~~l~~~l--g~p 35 (76)
T 3ej9_A 2 PMISCDMRYGRTDEQKRALSAGLLRVISEAT--GEP 35 (76)
T ss_dssp CEEEEEEETTCCHHHHHHHHHHHHHHHHHHH--CCC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH--CcC
Confidence 7889988889999999999999999999999 854
No 433
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=22.76 E-value=2.6e+02 Score=27.95 Aligned_cols=58 Identities=12% Similarity=0.042 Sum_probs=42.6
Q ss_pred ceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeC-CCCCHHHHHHHHH---hCCCcEEEEE
Q 001059 1065 TSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV-PDPSLTEQYEYAS---EHDIKCLVIL 1123 (1170)
Q Consensus 1065 ~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~-~~~~l~k~~~~A~---~~gi~~~iii 1123 (1170)
+.|.|+..+ .+.+..+.+.+..|..-|+.+++... ..|.+.+-.+|++ .+|++-+|.+
T Consensus 7 ~~V~IimgS-~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~ 68 (169)
T 3trh_A 7 IFVAILMGS-DSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAA 68 (169)
T ss_dssp CEEEEEESC-GGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CcEEEEECc-HHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEE
Confidence 356676654 77889999999999999999886443 3677888777754 5888844443
No 434
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=21.60 E-value=3.3e+02 Score=27.24 Aligned_cols=57 Identities=19% Similarity=0.028 Sum_probs=42.2
Q ss_pred eEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeC-CCCCHHHHHHHHHh---CCCcEEEEE
Q 001059 1066 SVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV-PDPSLTEQYEYASE---HDIKCLVIL 1123 (1170)
Q Consensus 1066 ~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~-~~~~l~k~~~~A~~---~gi~~~iii 1123 (1170)
.|.|+..+ ++.+..+.+.+..|+..|+..++... ..|.+.+-.+|++. +|++-+|.+
T Consensus 13 ~V~IimGS-~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~ 73 (170)
T 1xmp_A 13 LVGVIMGS-TSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAG 73 (170)
T ss_dssp SEEEEESS-GGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEE
T ss_pred cEEEEECc-HHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEE
Confidence 46666654 77889999999999999999886443 36788888888764 678844333
No 435
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=21.26 E-value=2.9e+02 Score=27.77 Aligned_cols=57 Identities=18% Similarity=0.132 Sum_probs=41.6
Q ss_pred eEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeC-CCCCHHHHHHHH---HhCCCcEEEEE
Q 001059 1066 SVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV-PDPSLTEQYEYA---SEHDIKCLVIL 1123 (1170)
Q Consensus 1066 ~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~-~~~~l~k~~~~A---~~~gi~~~iii 1123 (1170)
.|.|+..+ .+.+..+.+.+..|...|+++++... ..|.+.+..+|+ +.+|++-+|.+
T Consensus 9 ~V~IimgS-~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~ 69 (174)
T 3lp6_A 9 RVGVIMGS-DSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAG 69 (174)
T ss_dssp SEEEEESC-GGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred eEEEEECc-HHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEe
Confidence 46666654 77889999999999999999886443 367777777774 45788844443
No 436
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=20.86 E-value=49 Score=33.26 Aligned_cols=24 Identities=25% Similarity=0.445 Sum_probs=20.7
Q ss_pred EEEEEEEeCCCCCCCCCceeeecC
Q 001059 9 SALLLVRCLPGYPYKCPKLQITPE 32 (1170)
Q Consensus 9 ~~~l~~~~~~~yp~~~p~~~i~~~ 32 (1170)
...|.+.++++||.+||.+.....
T Consensus 87 ~f~l~i~fp~~YP~~PP~v~F~T~ 110 (170)
T 2hlw_A 87 IYSLKIECGPKYPEAPPFVRFVTK 110 (170)
T ss_dssp CBCEEEECCSSCTTSCCEEEECBC
T ss_pred EEEEEEECCCCCCCCCCeeEEecc
Confidence 366888999999999999998765
No 437
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=20.41 E-value=46 Score=34.87 Aligned_cols=22 Identities=27% Similarity=0.505 Sum_probs=14.1
Q ss_pred EEEEEEeCCCCCCCCCceeeec
Q 001059 10 ALLLVRCLPGYPYKCPKLQITP 31 (1170)
Q Consensus 10 ~~l~~~~~~~yp~~~p~~~i~~ 31 (1170)
..|.++++++||.+||.+....
T Consensus 52 f~l~i~fP~~YP~~PP~V~F~T 73 (215)
T 1tte_A 52 FVVDIEVPMEYPFKPPKMQFDT 73 (215)
T ss_dssp CEEEEECCSCSSSCCCEEEETT
T ss_pred EEEEEeCCccCCCCCCcccccC
Confidence 4456666777777777666554
No 438
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=20.28 E-value=56 Score=35.09 Aligned_cols=23 Identities=22% Similarity=0.447 Sum_probs=16.5
Q ss_pred EEEEEEEeCCCCCCCCCceeeec
Q 001059 9 SALLLVRCLPGYPYKCPKLQITP 31 (1170)
Q Consensus 9 ~~~l~~~~~~~yp~~~p~~~i~~ 31 (1170)
...|.|.++++||.+||.+....
T Consensus 108 ~f~l~i~fp~~YP~~PP~V~F~T 130 (253)
T 3e46_A 108 RYQLEIKIPETYPFNPPKVRFIT 130 (253)
T ss_dssp EEEEEEECCTTTTSSCCEEEESS
T ss_pred EEEEEEECCCCCCCCCCeeeecC
Confidence 46677777777777777777655
No 439
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=20.13 E-value=5.1e+02 Score=25.92 Aligned_cols=58 Identities=17% Similarity=0.082 Sum_probs=42.8
Q ss_pred ceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeC-CCCCHHHHHHHHHh---CCCcEEEEE
Q 001059 1065 TSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV-PDPSLTEQYEYASE---HDIKCLVIL 1123 (1170)
Q Consensus 1065 ~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~-~~~~l~k~~~~A~~---~gi~~~iii 1123 (1170)
+.|.|+.-+ ++.+..+.+.+..|+.-|+.+++... ..|.+.+-.+|++. +|++-+|.+
T Consensus 13 P~V~IimGS-~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~ 74 (173)
T 4grd_A 13 PLVGVLMGS-SSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAG 74 (173)
T ss_dssp CSEEEEESS-GGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEE
T ss_pred CeEEEEeCc-HhHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEe
Confidence 456666654 77889999999999999999886443 36788887777655 788854443
No 440
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A*
Probab=20.09 E-value=35 Score=38.43 Aligned_cols=18 Identities=17% Similarity=0.375 Sum_probs=15.8
Q ss_pred CCceEEeccHHHHHhhcc
Q 001059 1036 PSGVGASLALETIIQHYP 1053 (1170)
Q Consensus 1036 ~pAvGfaiglerL~~~L~ 1053 (1170)
+|.-|||+|+|||+.+|.
T Consensus 312 PPhgG~glGiDRLvmll~ 329 (345)
T 3a5y_A 312 PDCSGVALGVDRLVMLAL 329 (345)
T ss_dssp CSEEEEEEEHHHHHHHHH
T ss_pred CCCcEEEEcHHHHHHHHc
Confidence 489999999999987764
Done!