Query 001061
Match_columns 1167
No_of_seqs 334 out of 1238
Neff 7.0
Searched_HMMs 46136
Date Thu Mar 28 14:45:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001061.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001061hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1958 Glycosyl hydrolase, fa 100.0 2E-251 3E-256 2164.3 70.2 1091 16-1163 15-1128(1129)
2 PLN02701 alpha-mannosidase 100.0 3E-244 6E-249 2281.7 106.3 1046 118-1164 1-1050(1050)
3 KOG1959 Glycosyl hydrolase, fa 100.0 5E-198 1E-202 1712.6 69.3 908 149-1166 29-996 (996)
4 PRK09819 alpha-mannosidase; Pr 100.0 8.5E-94 1.8E-98 915.1 84.0 657 155-962 2-707 (875)
5 KOG4342 Alpha-mannosidase [Car 100.0 2.5E-66 5.3E-71 585.3 51.3 638 155-967 279-933 (1078)
6 PF01074 Glyco_hydro_38: Glyco 100.0 6.4E-59 1.4E-63 523.1 26.5 272 158-497 1-275 (275)
7 PF07748 Glyco_hydro_38C: Glyc 100.0 4.3E-43 9.3E-48 422.5 34.6 421 645-1160 1-457 (457)
8 COG0383 AMS1 Alpha-mannosidase 100.0 8.1E-42 1.7E-46 431.1 33.5 591 151-962 192-790 (943)
9 PF09261 Alpha-mann_mid: Alpha 99.8 3.5E-21 7.5E-26 175.5 6.0 80 502-587 1-80 (80)
10 smart00872 Alpha-mann_mid Alph 99.8 2.3E-19 4.9E-24 163.2 8.2 79 503-587 1-79 (79)
11 COG0383 AMS1 Alpha-mannosidase 99.6 5.5E-18 1.2E-22 215.5 -4.2 358 156-589 3-389 (943)
12 PF03065 Glyco_hydro_57: Glyco 98.2 7.3E-06 1.6E-10 96.4 12.1 143 161-305 2-196 (360)
13 COG1543 Uncharacterized conser 96.3 0.013 2.9E-07 68.6 9.1 93 210-303 114-207 (504)
14 TIGR03212 uraD_N-term-dom puta 95.4 1.4 3E-05 50.7 20.4 106 187-305 79-186 (297)
15 PF01522 Polysacc_deac_1: Poly 95.1 0.17 3.7E-06 49.4 10.5 102 186-299 19-122 (123)
16 COG1449 Alpha-amylase/alpha-ma 89.0 5.4 0.00012 50.4 14.4 93 201-299 161-262 (615)
17 TIGR02764 spore_ybaN_pdaB poly 87.7 2.8 6.1E-05 44.7 9.5 100 188-300 22-124 (191)
18 TIGR03006 pepcterm_polyde poly 85.8 5.1 0.00011 45.3 10.6 105 186-302 29-138 (265)
19 TIGR02884 spore_pdaA delta-lac 84.7 4 8.6E-05 44.9 8.9 100 188-299 53-155 (224)
20 PRK14581 hmsF outer membrane N 80.6 4.5 9.6E-05 51.3 8.1 120 173-304 111-275 (672)
21 TIGR02873 spore_ylxY probable 79.8 8.7 0.00019 43.5 9.4 99 187-298 100-201 (268)
22 PF08672 APC2: Anaphase promot 50.1 18 0.0004 31.3 3.3 22 220-241 37-58 (60)
23 TIGR03826 YvyF flagellar opero 43.2 23 0.00051 35.9 3.3 46 186-238 31-76 (137)
24 KOG4120 G/T mismatch-specific 41.9 1E+02 0.0022 35.1 8.2 80 238-342 202-287 (426)
25 PRK14582 pgaB outer membrane N 39.7 1.2E+02 0.0027 38.8 9.7 80 223-304 168-275 (671)
26 PRK15394 4-deoxy-4-formamido-L 32.3 1.5E+02 0.0032 34.3 8.0 79 223-304 92-174 (296)
27 PRK12270 kgd alpha-ketoglutara 31.1 1.4E+02 0.003 39.6 8.0 50 410-467 1011-1061(1228)
28 COG4744 Uncharacterized conser 29.2 82 0.0018 30.5 4.3 35 46-80 24-58 (121)
29 PF06143 Baculo_11_kDa: Baculo 28.0 81 0.0018 29.2 3.9 36 33-71 24-59 (84)
30 TIGR03092 SASP_sspI small, aci 25.1 76 0.0017 27.8 3.0 25 208-232 39-63 (65)
31 PF12911 OppC_N: N-terminal TM 25.0 82 0.0018 26.3 3.2 33 36-68 3-35 (56)
32 PRK10148 hypothetical protein; 24.8 25 0.00055 36.0 0.1 18 273-290 123-140 (147)
33 PF12395 DUF3658: Protein of u 23.7 95 0.0021 30.3 3.9 68 159-245 41-108 (111)
34 PF02929 Bgal_small_N: Beta ga 22.8 1.1E+03 0.025 26.6 13.6 37 758-795 1-38 (276)
35 PF13289 SIR2_2: SIR2-like dom 22.5 4.8E+02 0.01 25.6 8.9 83 202-298 59-141 (143)
36 PF15590 Imm15: Immunity prote 20.5 61 0.0013 28.7 1.5 29 140-170 22-50 (69)
No 1
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-251 Score=2164.31 Aligned_cols=1091 Identities=47% Similarity=0.792 Sum_probs=961.7
Q ss_pred cccccc-ccCCC-CCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCC-C-CCCCCC
Q 001061 16 TWASSL-LPSAT-KSKIPSSRKSRKRTALINFVFANFFTIALAVSVSFFLLTIFFFGVPTPISSHFKSKPA-R-GVRPRK 91 (1167)
Q Consensus 16 ~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ 91 (1167)
.|...+ |+... +++..++|+++|+ -||.+++++.|++.+..++.++.-.+.+++.+..+.+.++.+ + .+.|++
T Consensus 15 ~~~~v~~Ly~~l~~~~~~~~~~~~~e---gn~p~~~~~~~~~~i~~le~~l~~~~~~i~~~~~~~~~~s~~~e~~~~p~~ 91 (1129)
T KOG1958|consen 15 GCLAVFLLYLMLDRSILAPNRTPIKE---GNFPSAALSVIQLTIDTLEQLLQENHEIISNIKDSLVETSNSKEVSSEPKK 91 (1129)
T ss_pred HHHHHHHHHHHHHhhccCCCCCcccc---CCCchhhhhhhhhHHHHHHHHHhhccccccchHHHHHHhhcccccccCccc
Confidence 465554 67555 8999999999999 799999999999999999999999999999998888776663 3 555554
Q ss_pred CCCccccc-cccc-c--ccccccCcc-cccCCccchhcccccceeecCCCCccccceeeeecCCCCCCcc-eEEEEeecc
Q 001061 92 PISRNHRH-HRLV-D--NKQKTNGVV-LEAEVDLTTKGLYDKIQFLDVDGGAWKQGWDVKYRGDEWDHEK-LKIFVVPHS 165 (1167)
Q Consensus 92 ~~~~~~~~-~~~~-~--~~~~~~~~~-~~~~~~~~~~~~y~~~~f~~~~gg~wkqg~~~~~~~~~~~~~~-l~V~vVpHS 165 (1167)
.......- +..+ . .++-.-..+ .++.+|+||+++|++++|+|+|||||||||+|+|++++|+.++ |+|+|||||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~C~~~~~~~~a~~d~qml~lyd~~~f~~~dggvWkqG~~i~yd~~~~~~~~~LkvfVvPHS 171 (1129)
T KOG1958|consen 92 VQNSVSPEPSEPRPSNSGDDCQFAMQNRGANTDLQMLDLYDRMPFLNPDGGVWKQGFKITYDPKKWDKEPFLKVFVVPHS 171 (1129)
T ss_pred ccCCCCCCCcccccCcccchhhhhhcCCcccchHHHHHHHHhhhhhCCCcchhhcCceeecChhhcccccceEEEEeecc
Confidence 44321110 0000 0 110011122 4679999999999999999999999999999999999999877 999999999
Q ss_pred ccCccccccHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceecccc
Q 001061 166 HNDPGWKLTVDEYYDRQSRHILDTIVETLSKDARRKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMND 245 (1167)
Q Consensus 166 H~D~GWl~T~deyy~~~v~~Ild~vv~~L~~dp~~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~D 245 (1167)
|+||||++||++||+.++|+||++|+..|.+||++||||+||+||++||+++++++|++||+||++||||||+|||||||
T Consensus 172 HnDPGW~~Tf~~Yy~~~tr~Il~~~v~~L~e~~~~~FIwaEiS~~~~ww~~~~~~kk~a~k~lv~~GqlEIvtGGWVMpD 251 (1129)
T KOG1958|consen 172 HNDPGWIKTFEEYYQRQTRHILNNMVNKLSEDPRMKFIWAEISFLERWWDDASPTKKNAVKRLVKNGQLEIVTGGWVMPD 251 (1129)
T ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHhhhCcccchhhhhHHHHHHhhhhcChHHHHHHHHHHhcCcEEEEeCccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCchhHHHHHHHcCCceeEeeccchhhHHHHhcCCcceEEEEe
Q 001061 246 EANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQ 325 (1167)
Q Consensus 246 Ea~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~vi~Ri~~~~K~~~~~~k~~eF~Wr~ 325 (1167)
||++||.+||+|+++||+||++++|++|++||+|||||||++|||||+++||++|+|||+||.+|++++.+|++||+|||
T Consensus 252 EAn~Hy~~~i~qliEGh~Wl~~~igv~P~s~WaiDPFG~S~TmpYLL~~ag~~~mlIQRvHYavKk~lA~qk~leF~WRQ 331 (1129)
T KOG1958|consen 252 EANSHYFAMIDQLIEGHQWLKNNIGVTPQSGWAIDPFGYSSTMPYLLRRAGFENMLIQRVHYAVKKELAQQKSLEFIWRQ 331 (1129)
T ss_pred ccchhHHHHHHHHhhhhhHHhccCCCCCCcccccCCCCCCcchHHHHhhcCchhHHHHHHHHHHHHHHHHhcccceeehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceEEEecCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCCHhHHHHHHHHHHHHHHhhccc
Q 001061 326 SWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTL 405 (1167)
Q Consensus 326 s~~~~~gs~I~th~~p~y~Y~~p~tcgp~p~ic~~fDf~r~~g~~~~~cpw~~~p~~i~~~Nv~~ra~~ll~~~~k~s~~ 405 (1167)
+||..+.++|||||||||+|||||||||+|+|||||||+||+|++.+ |||+++|..|+++||++||++|+|||||+|++
T Consensus 332 ~wds~~~tDl~tHmMPFysYDIphTCGPdP~ICCqFDFkRmpg~~~~-Cpw~vpP~~It~~NVa~rA~~LldQyrKkS~L 410 (1129)
T KOG1958|consen 332 YWDSTGDTDLLTHMMPFYSYDIPHTCGPDPKICCQFDFKRMPGGGCE-CPWGVPPEKITDANVAARAELLLDQYRKKSEL 410 (1129)
T ss_pred hccCCCCcchheeecccccccCCCccCCCCceeeeeecccCCCCCcC-CCCCCCCeeechhhHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999974 99999999999999999999999999999999
Q ss_pred ccCCeEEEEecCCCCCCchhHHHHHHHhHHHHHHHHhcCCCCCceEEECCHHHHHHHHHHHhhcccCCCCCccCCCCccC
Q 001061 406 YRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEG 485 (1167)
Q Consensus 406 y~tn~lL~p~GdDf~y~~~~~a~~~f~n~~kli~~iN~~~~~~~~i~~sTl~dYf~al~~~~~~~~~~~~ge~~~~~~~~ 485 (1167)
||+|++|+|+||||||...+||++||.||++||+|||+++.+++++||||++|||+||+++.. |..+++ ..
T Consensus 411 fr~nVlLiPlGDDFRy~~~~Ewd~Q~~NY~~LFD~iNs~~~~nv~aqFGTlsDYF~al~k~~~--------e~~kg~-~~ 481 (1129)
T KOG1958|consen 411 FRTNVLLIPLGDDFRYDKITEWDQQFDNYQKLFDHINSRPLLNVQAQFGTLSDYFDALDKAYS--------ERGKGQ-EP 481 (1129)
T ss_pred cccceEEEecCCccccCccHHHHHHHHHHHHHHHHHhcccccceeeecCCHHHHHHHHHHhhc--------cccCCC-CC
Confidence 999999999999999999999999999999999999999999999999999999999999753 111222 34
Q ss_pred CCceecccccccccCCccceeeeecchhhhhhhHHHHHHHHHHHHHHHHHHhhccccccc-cCChhHHHHHHHHHHHhhh
Q 001061 486 FPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCE-KLPMSFAYKLTAARRNLAL 564 (1167)
Q Consensus 486 ~P~~~GDffpYad~~~~yWtGyyTSRp~~K~~~R~~e~~Lr~aE~L~sla~~~~~~~~~~-~~~~~~~~~L~~a~r~l~l 564 (1167)
||+++||||+|||+.+|||||||||||++|+++|++|++||+||+|+++|.+.+.+.+.. .++...+.+|++|||+|+|
T Consensus 482 FPtlSGDFFtYaDr~d~YWSGYyTSRPFyK~ldRvLeh~lR~AEIl~s~a~~~~~r~~~~~r~~~~~~~~L~~ARRnL~L 561 (1129)
T KOG1958|consen 482 FPTLSGDFFTYADRDDHYWSGYYTSRPFYKRLDRVLEHYLRSAEILFSLALAHAHRVGLAQRIEESNYELLTAARRNLGL 561 (1129)
T ss_pred CcccccCceeeecccCccceeeeecchHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999999999999999999887665443322 5677788999999999999
Q ss_pred hcccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---cccCCCccccccccccccCCCCcceeeeccC
Q 001061 565 FQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRE---RYDQNLSQFEPEQVRSKYDAQPVHKVINVHE 641 (1167)
Q Consensus 565 ~QHHDaItGTsk~~V~~Dy~~rL~~a~~~~~~vi~~al~~Ll~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 641 (1167)
||||||||||||++|+.||++||+++++.|+.++++++..|++... +++....++++++.+.+++.+|.+.++.++.
T Consensus 562 FQHHDaITGTaK~~Vv~DYg~rl~~Sl~~~~~v~~~~~~~Ll~~~~~~y~~~~~~~~~emd~~r~~~~~~pek~~~~~~~ 641 (1129)
T KOG1958|consen 562 FQHHDAITGTAKDAVVVDYGQRLHESLVNLQIVLENALELLLGKDSETYNSDPSHSFIEMDDIRDSEDSLPEKTVIGLSS 641 (1129)
T ss_pred hhcccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCCceehhhcccCCCcCcccceeeccC
Confidence 9999999999999999999999999999999999999999987652 4556667899999999999999998888854
Q ss_pred CCcceEEEEcCCCcceeEEEEEEEecCcEEEEeCCCeEEEEeeccccccCCcc-cccCcEEEEEEEecCCCeeEEEEEEc
Q 001061 642 GTSQSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSK-IFTGRHRLHWKATIPALGLQVYYIAN 720 (1167)
Q Consensus 642 ~~~~~vvvfNpL~~~R~~vV~v~V~~~~v~V~d~~G~~V~~Qi~p~~~~~~~~-~~~~~~~L~F~a~vPpLG~~ty~I~~ 720 (1167)
.++.||+||||+++|.++|+|.|++|.|.|++..|++|++||+|+|+...++ +.++.|+|+|.|+|||||+.+|++..
T Consensus 642 -~~~~vvlfN~l~q~R~evv~i~V~sp~V~V~~d~g~pv~~Qispvw~~~~tk~~~~~~~~l~f~a~vpplgl~v~~~~~ 720 (1129)
T KOG1958|consen 642 -GPRSVVLFNPLEQEREEVVTIRVNSPEVSVLDDGGVPVEAQISPVWQDTKTKTIKPGSYRLSFKATVPPLGLMVLRIDS 720 (1129)
T ss_pred -CCceEEEeccchhhhhccEEEEecCCeeEEEcCCCceeeEeeccceeccccceeecceeEEEEEEecccceeeEEEeec
Confidence 5689999999999999999999999999999999999999999999754443 34559999999999999999999988
Q ss_pred CccccCCCCccceeccCCCCCCCCCCCccccCCC--CceEEeeCeEEEEEEccCceEEEEE-ccCCcEEEeeeeeeeecc
Q 001061 721 GFVGCDKAKPVKLKYSSDNSFSCPTPYACSKIEG--DVADIRNRHQILSFDVRHGLLQKIS-HINGSQNVVEEEIDMYSS 797 (1167)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~IEN~~~~l~fd~~tGlL~si~-~k~g~~~~v~~~f~~Y~s 797 (1167)
+...+....+++ ..++++...+++..... +..+++|++..|.||+++|+|+++. ..|++...++..|..|+.
T Consensus 721 ~~~~~~~~l~s~-----~~~~~~~~~~s~~~~~~~~~~s~~~~~~~~l~fd~~~G~i~~~~~~~D~~~~~~q~~f~~y~~ 795 (1129)
T KOG1958|consen 721 GGLTEHAKLPSK-----DTSFPAWDLGSSSTIGDSRELSTLRNEYFELRFDPETGTIKSINSLSDNKHFESQVSFSNYGE 795 (1129)
T ss_pred cCcccccccccC-----CCCcccCCCccceeecCccccceeeccceeEEeccccchhhhhhhcccCCCcccceeeccccc
Confidence 754433222221 23455555555444422 2348999999999999999999998 457888888888988864
Q ss_pred ----CCCCceeeccCCCCccccc-CCcEEEEEeCCceEEEEEeecccccCccEEEEEEEeeCCCccceeEEEEEEEeeec
Q 001061 798 ----QGSGAYLFMPNGDAHPITE-AGGLMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELL 872 (1167)
Q Consensus 798 ----~~SGAYiF~P~g~~~~~~~-~~~~~~v~~Gpl~sev~~~~~~~~~~s~i~~~vrLy~~~~~~~~~~iEi~~~Vd~~ 872 (1167)
..||||+|+|+|+++|++. ..+.+++ +|||+++|.+.+++.+.+.. |.+|+|.|. .+|+++.||+.
T Consensus 796 ~~~~~~sgaylf~p~G~a~~~i~~~~p~v~v-~g~L~qev~~~~~~v~~~~~--~~~~~~~G~------~vei~~~vdi~ 866 (1129)
T KOG1958|consen 796 RISGDESGAYLFLPDGNAKPIIELQWPHVRV-KGPLVQEVSQFLKNVLHRLS--QNVRGYSGE------EVEISNSVDIR 866 (1129)
T ss_pred cccCCCCceEEEccCCCCCCceecCCCeEEe-ecceeeeeccccchHHHhch--hheeccCCc------ceeeeceeecc
Confidence 4579999999999999665 4556666 99999999998876665433 889999886 49999999986
Q ss_pred cCCCCCcEEEEEEEeecCCCceEEEccCCccccccCccCCCCCCcceEeccceEEEecCCCCeeEEeecCCcceeeccCC
Q 001061 873 SHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDG 952 (1167)
Q Consensus 873 ~~~~~n~El~~rf~T~I~s~~~fYTD~NG~q~ikR~~~~~~pv~~NyYP~~s~a~I~D~~~~rltvltdrs~G~sSl~~G 952 (1167)
+..|+|++|||+|++++++.||||+||+||+||++..|+|+|+|||||+++|||||.+ +||+++|.|++||+||.+|
T Consensus 867 --~~~n~Ela~R~st~vds~~~FyTDlnG~Q~~kR~~~~KlPlQaNyYPmpt~a~Iq~~~-~RlsihS~q~lGvssL~sG 943 (1129)
T KOG1958|consen 867 --KEDNTELAMRFSTDVDSGDLFYTDLNGMQMIKRRRLDKLPLQANYYPMPTAAFIQDAK-QRLSIHSAQSLGVSSLESG 943 (1129)
T ss_pred --cccchhhhhhhhhcccCCceeeeccchhhhhhhhhcccCcccceeecccceeeeecCC-ceEEEEeecccCccccccc
Confidence 4589999999999999999999999999999999999999999999999999999996 8999999999999999999
Q ss_pred eEEEEEccccccCCCCCCCcCccCCcceeEEEEEEEecccccCccCCCCCcccCcchhhhhccccccccceeeeccCCCC
Q 001061 953 WLEIMLDRRLSRDDGRGLGQGVLDNRAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQE 1032 (1167)
Q Consensus 953 ~lElmL~RRl~~DD~rGlge~l~Dn~~~~~~f~llle~~~~~~~~~~~~~~~~~psl~sh~~~~~l~~P~~~~~~~~~~~ 1032 (1167)
+||||+||||.+||+||||||+.|||+|.+.|||++|...++..+....++.+ ||++||++++.|+||++.|+.+.+..
T Consensus 944 ~iEIm~DRrL~~DD~rGLgqGv~DNk~t~~~frlv~e~~~s~~~p~e~~~~~~-ps~~ah~a~~~l~yP~~~f~~~~pk~ 1022 (1129)
T KOG1958|consen 944 QIEIMLDRRLNQDDGRGLGQGVIDNKPTDMKFRLVLESLNSAQDPTENSRVSY-PSLAAHLASQSLNYPLMKFIYAEPKK 1022 (1129)
T ss_pred eEEEEecccccCCCCccccccccccchhhheeeeeecccccccCchhcCCCCC-hhhhhhcccceecCCchhhcccCCCC
Confidence 99999999999999999999999999999999999999887555555566666 99999999999999999998554332
Q ss_pred CcCCCCCCCcCCCCCCCCCceeEEeeecCCCCCCCCCCCCccceeEEEEeeccCcccccCCCCccccccccccchhhhcc
Q 001061 1033 LSVQPPPRSFSPLAGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFK 1112 (1167)
Q Consensus 1033 ~~~~~~~~~fs~l~~~LP~dvHLltLr~~~~~~~~~~~~~~~r~~liL~r~~~d~~~~~~~~~~c~~~~~~~v~l~~LF~ 1112 (1167)
. ..+..|.|+..+||||+||||||++++.+ ....|+++||||.+.||+++.++. |+ +.++++.+|+.
T Consensus 1023 i---~~~g~~~~~~~~lpcDl~lvt~rtl~~~~-----~~~~~~~lil~R~~~~c~~~~~g~--c~---~~ki~~~~ll~ 1089 (1129)
T KOG1958|consen 1023 I---EDQGIFEPLNLSLPCDLHLVTFRTLESSK-----AAEKRAALILHRHATDCRSQKKGT--CG---QLKISVMDLLI 1089 (1129)
T ss_pred h---hhccccccccCCCccceeEEEeeeccCcc-----cccccceeeeeecccccccccccc--cc---cccCcHHHHHH
Confidence 1 22567899999999999999999999765 256789999999999999987765 86 56899999999
Q ss_pred cCccceEEEccccCccccccccCCCCcccCCCCCCceEeccceeeEEEEEE
Q 001061 1113 GLAILNAKATSLNLLNDDIGMLGYPEQLEDVSQDGQVTIAPMEIQAYKLEM 1163 (1167)
Q Consensus 1113 ~~~v~~~~etsLt~~~~~~~~~~~~~~~~~~~~~~~v~L~PMEIrTf~i~~ 1163 (1167)
+ +.+++.|||++++...... +.....++||||++|++.+
T Consensus 1090 ~--~~~v~~tsLs~l~~~~~~~----------~~~~~~~~pme~~~~l~~~ 1128 (1129)
T KOG1958|consen 1090 K--AKSVKKTSLSLLQEVGGII----------GVEEQELSPMEISAFLTSL 1128 (1129)
T ss_pred H--HHhhchhhHHhhhhcccCC----------Ccccccccccccccccccc
Confidence 8 8999999999999765432 3345678999999999875
No 2
>PLN02701 alpha-mannosidase
Probab=100.00 E-value=2.6e-244 Score=2281.70 Aligned_cols=1046 Identities=78% Similarity=1.294 Sum_probs=942.2
Q ss_pred CccchhcccccceeecCCCCccccceeeeecCCCCCCcceEEEEeeccccCccccccHHHHHHHHHHHHHHHHHHHHhcC
Q 001061 118 VDLTTKGLYDKIQFLDVDGGAWKQGWDVKYRGDEWDHEKLKIFVVPHSHNDPGWKLTVDEYYDRQSRHILDTIVETLSKD 197 (1167)
Q Consensus 118 ~~~~~~~~y~~~~f~~~~gg~wkqg~~~~~~~~~~~~~~l~V~vVpHSH~D~GWl~T~deyy~~~v~~Ild~vv~~L~~d 197 (1167)
+||||+|+|++++|||+|||||||||+|+|+++||+.++++||||||||||+|||||+||||+..+++||++||+.|++|
T Consensus 1 ~~~~~~~~y~~~~f~~~~gg~w~qg~~~~y~~~~~~~~~l~VhlVpHSH~D~gWl~T~~eyy~~~~~~ild~vv~~L~~d 80 (1050)
T PLN02701 1 VDITTKDLYDRIEFLDKDGGAWKQGWRVKYRGDEWDREKLKVFVVPHSHNDPGWILTVEEYYQEQSRHILDTIVESLSKD 80 (1050)
T ss_pred CccchhhhhhcCcccCCCCCeeccccceeecccccCCcceEEEEeCCCCCCHHHcCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcce
Q 001061 198 ARRKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSW 277 (1167)
Q Consensus 198 p~~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW 277 (1167)
|+|||+|+|++||++||++++|++|++||+||++||||||||||||+|||++||++|||||++||+|++++||+.|++||
T Consensus 81 p~rkFi~~E~~fl~~Ww~~~~pe~~~~vk~LV~~GrLE~vgGgwvm~DEa~~~~esiI~Ql~~G~~~l~~~fG~~P~~~W 160 (1050)
T PLN02701 81 PRRKFIWEEMSYLERWWRDASPSKKEAFTKLVKNGQLEIVGGGWVMNDEANSHYFAIIEQITEGNMWLNDTIGVAPKNSW 160 (1050)
T ss_pred cCcceeeccHHHHHHHHHhcCHHHHHHHHHHHHcCCEEEECCceecccccccCHHHHHHHHHhhhHHHHhhcCCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHcCCceeEeeccchhhHHHHhcCCcceEEEEecCCCCCCCceEEEecCCcccCCCCCCCCCCcc
Q 001061 278 AIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAV 357 (1167)
Q Consensus 278 ~iDpFGhS~~~p~Ll~~~G~~~~vi~Ri~~~~K~~~~~~k~~eF~Wr~s~~~~~gs~I~th~~p~y~Y~~p~tcgp~p~i 357 (1167)
+|||||||++|||||++|||++++|+|+||++|+.+++++.+||+|+++|++++|++||||+||+|+|++||+|||+|+|
T Consensus 161 ~iDpFGhs~~~P~Ll~~~G~~~~~~~R~~y~~k~~~~~~~~~eF~W~~s~~~~dgs~Ift~~lp~y~Y~~p~~~~p~p~~ 240 (1050)
T PLN02701 161 AIDPFGYSSTMAYLLRRMGFENMLIQRTHYEVKKELAQNKNLEYIWRQSWDAEETTDIFVHMMPFYSYDIPHTCGPEPAI 240 (1050)
T ss_pred cCCCCCCCHHHHHHHHhCCCceEEEeccchHHHHHHhhcCCceEEEeCCCCCCCCCEEEEEEccccccCcccccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCcccccCCCCCCCCCCCHhHHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCchhHHHHHHHhHHHH
Q 001061 358 CCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLL 437 (1167)
Q Consensus 358 c~~fDf~r~~g~~~~~cpw~~~p~~i~~~Nv~~ra~~ll~~~~k~s~~y~tn~lL~p~GdDf~y~~~~~a~~~f~n~~kl 437 (1167)
||||||.|++|+++..|||+++|..++++||++||+++++++++++.+|++|++|+|+||||+|++.++|+.||+||++|
T Consensus 241 c~~Fd~~~~~~~~~~~cp~~~~p~~~~~~nv~~r~~~~~~~~~~~s~~~rtn~iL~p~GdDf~~~~~~~a~~~f~n~dkl 320 (1050)
T PLN02701 241 CCQFDFARMRGFQYELCPWGKHPVETNDENVQERAMKLLDQYRKKSTLYRTNTLLVPLGDDFRYISIDEAEAQFRNYQKL 320 (1050)
T ss_pred ccccccccccccccccCcccCCccccchhHHHHHHHHHHHHHHHhhccccCCeEEEecCCCCCCcchhHHHHHHHhHHHH
Confidence 99999999999998899999999999999999999999999999999999999999999999999989999999999999
Q ss_pred HHHHhcCCCCCceEEECCHHHHHHHHHHHhhcccCCCCCccCCCCccCCCceecccccccccCCccceeeeecchhhhhh
Q 001061 438 FDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAV 517 (1167)
Q Consensus 438 i~~iN~~~~~~~~i~~sTl~dYf~al~~~~~~~~~~~~ge~~~~~~~~~P~~~GDffpYad~~~~yWtGyyTSRp~~K~~ 517 (1167)
|+|+|++++.+++++|||+++||++|+++....+++.+||++++....||+++||||||||++++||||||||||++|++
T Consensus 321 i~~iN~~~~~~~~i~~ST~~~Yf~~l~~~~~~~~~~~~ge~~~~~~~~~p~~~gDff~Ya~~~~~yWTGyyTSRp~lK~~ 400 (1050)
T PLN02701 321 FDYINSNPSLKAEVKFGTLEDYFSTLRDEADRINYSRPGEVGSGEVPGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAV 400 (1050)
T ss_pred HHHHhhCcccCceEEECCHHHHHHHHHhhhccccccccccccccccCCCceecccccccccccccccceeeecHHHHHHH
Confidence 99999998778999999999999999997655667888999988778899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccccccccCChhHHHHHHHHHHHhhhhcccCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q 001061 518 DRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIF 597 (1167)
Q Consensus 518 ~R~~e~~Lr~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~a~r~l~l~QHHDaItGTsk~~V~~Dy~~rL~~a~~~~~~v 597 (1167)
+|++|++|++||+|+++|...+....+..||....+.|+.|||+|+++|||||||||||++|++||..||.+|+..++.+
T Consensus 401 ~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~~wk~l~~~QhHDaItGTsk~~V~~Dy~~rl~~~~~~~~~~ 480 (1050)
T PLN02701 401 DRVLEQTLRAAEILFSFLLGYCRRFQCEKLPTSFSYKLTAARRNLALFQHHDGVTGTAKDHVVVDYGTRMHTSLQDLQIF 480 (1050)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccccCCChhhHHHHHHHHHHHHhhccCcCcCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999765432223455775556789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcc-ccccCCCccccccccccccCCCCcceeeeccCCCcceEEEEcCCCcceeEEEEEEEecCcEEEEeCC
Q 001061 598 MSKAIEVLLGIR-ERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIVNRPDITVLDSN 676 (1167)
Q Consensus 598 i~~al~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vvvfNpL~~~R~~vV~v~V~~~~v~V~d~~ 676 (1167)
+.+|++.|+... .+.+.....|+.|+.+.+++.||++.++.+.+++...|+|||||+|+|+++|+|+|+.+.+.|+|++
T Consensus 481 ~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~~~r~~vV~v~V~~~~~~V~d~~ 560 (1050)
T PLN02701 481 MSAAVEVLLGIRHEKSDQTPSWFEPEQSRSKYDMLPVHKVINLREGKAHRVVFFNPLEQTREEVVMVVVDRPAVCVFDSN 560 (1050)
T ss_pred HHHHHHHHhhccccccccccccccccccccccccccccccccccCCCceEEEEECCCCceeeEEEEEEecCCcEEEEcCC
Confidence 999999988643 2233344568899999999999998877766666788999999999999999999999999999999
Q ss_pred CeEEEEeeccccccCCcccccCcEEEEEEEecCCCeeEEEEEEcCccccCCCCccceec-cCCCCCCCCCCCccccCCCC
Q 001061 677 WTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLKY-SSDNSFSCPTPYACSKIEGD 755 (1167)
Q Consensus 677 G~~V~~Qi~p~~~~~~~~~~~~~~~L~F~a~vPpLG~~ty~I~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 755 (1167)
|++|++|++|+|.........+.|+|.|.|+||||||++|+|......+....++.+.. ...+.+.++.++.+.....+
T Consensus 561 g~~v~~Qi~~~~~~~~~~~~~~~~~l~F~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (1050)
T PLN02701 561 WTCVPSQISPEWQHDGEKLFTGRHRLYWKASVPALGLETYFIANGNVSCEKAVPAKLKVFNSDDKFPCPEPYSCSKLEGD 640 (1050)
T ss_pred CCEEeEEEeccccccccccccceEEEEEEEecCCceeEEEEEEEcCCCcccccccccccccccccccccccccccccCCC
Confidence 99999999999865333345568999999999999999999987644433333322221 11222333334444334456
Q ss_pred ceEEeeCeEEEEEEccCceEEEEE-ccCCcEEEeeeeeeeeccCCCCceeeccCCCCcccccCCcEEEEEeCCceEEEEE
Q 001061 756 VADIRNRHQILSFDVRHGLLQKIS-HINGSQNVVEEEIDMYSSQGSGAYLFMPNGDAHPITEAGGLMVISKGPLMEEAYS 834 (1167)
Q Consensus 756 ~~~IEN~~~~l~fd~~tGlL~si~-~k~g~~~~v~~~f~~Y~s~~SGAYiF~P~g~~~~~~~~~~~~~v~~Gpl~sev~~ 834 (1167)
.++|||++++|+||++||+|++|+ +++|++..+.++|.+|.+++||||+|+|++.+.++......+++++|||+++|++
T Consensus 641 ~~~ieN~~lkl~Fd~~TG~L~si~~~~~g~~~~v~q~f~~Y~s~~SGAYiFrP~~~~~p~~~~~~~~~v~~Gplv~eV~~ 720 (1050)
T PLN02701 641 TVEISNSHQTLGFDVKTGLLRKIKIHKNGSETVVGEEIGMYSSQGSGAYLFKPDGEAQPIVQAGGLVVVSEGPLVQEVHS 720 (1050)
T ss_pred cEEEecCeEEEEEcCCCCceeEEEecccCceecceeeeeeecCCCCcceEEcCCCCCcccCCCCceEEEEeCCEEEEEEE
Confidence 789999999999999999999998 5789999999999999999999999999999888777666778999999999999
Q ss_pred eecccccCccEEEEEEEeeCCCccceeEEEEEEEeeeccCCCCCcEEEEEEEeecCCCceEEEccCCccccccCccCCCC
Q 001061 835 YPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIP 914 (1167)
Q Consensus 835 ~~~~~~~~s~i~~~vrLy~~~~~~~~~~iEi~~~Vd~~~~~~~n~El~~rf~T~I~s~~~fYTD~NG~q~ikR~~~~~~p 914 (1167)
.+++.+++++++|++|||++.+++++..||++|+||+||.+..|+|++|||+|+|+|+++||||+|||||+||++|+++|
T Consensus 721 ~~~~~~~~s~isQ~iRLY~~~~~~~~~~vE~e~~V~~ip~d~~~kEii~R~~T~i~s~~~FYTDsNG~qm~kR~~~~~~P 800 (1050)
T PLN02701 721 VPKTKWEKSPLSRSTRLYHGGKSVQDLSVEKEYHVELLGHDFNDKELIVRFKTDIDNKRVFYSDLNGFQMSRRETYDKIP 800 (1050)
T ss_pred EeecccCCcceEEEEEEecCCCccccceEEEEEEecCcccCCCCcEEEEEEeecccCCCeEEEcCccceeeeecccccCc
Confidence 87666777899999999998666777789999999999877789999999999999999999999999999999999999
Q ss_pred CCcceEeccceEEEecCCCCeeEEeecCCcceeeccCCeEEEEEccccccCCCCCCCcCccCCcceeEEEEEEEeccccc
Q 001061 915 LQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRDDGRGLGQGVLDNRAMNVVFHILVESNISS 994 (1167)
Q Consensus 915 v~~NyYP~~s~a~I~D~~~~rltvltdrs~G~sSl~~G~lElmL~RRl~~DD~rGlge~l~Dn~~~~~~f~llle~~~~~ 994 (1167)
+|||||||+++|||||++++|||||||||+|||||++|+|||||||||++||+|||||||+||++|+++|||++|++.+.
T Consensus 801 v~gNYYPv~s~a~IqD~~~~rltvltdrs~G~sSl~~GqLEiMLhRRLl~DD~rGvge~l~dnk~~~~~f~ll~e~~~~~ 880 (1050)
T PLN02701 801 LQGNYYPMPSLAFLQGSNGQRFSVHSRQSLGVASLKNGWLEIMLDRRLVQDDGRGLGQGVMDNRPMNVVFHLLLESNISS 880 (1050)
T ss_pred cccccccccceEEEEcCCCCeEEEEeccCcccccCCCcEEEEEEEeecccccCccccccccccccccceEEEEEeccccc
Confidence 99999999999999995458999999999999999999999999999999999999999999999999999999988764
Q ss_pred CccCCCCCcccCcchhhhhccccccccceeeeccCCCCCcCCCC-CCCcCCCCCCCCCceeEEeeecCCCCCCCCCCCCc
Q 001061 995 TSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQPP-PRSFSPLAGSLPCDLHIVNFKVPRPSKYSQQSPDD 1073 (1167)
Q Consensus 995 ~~~~~~~~~~~~psl~sh~~~~~l~~P~~~~~~~~~~~~~~~~~-~~~fs~l~~~LP~dvHLltLr~~~~~~~~~~~~~~ 1073 (1167)
..........+ |||+||.+++.||||+++|+.++......... ..+|+||.++||||+||||||++++.++.......
T Consensus 881 ~~~~~~~~~~~-~Sl~sh~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~lpcD~hlv~lrt~~~~~~~~~~~~~ 959 (1050)
T PLN02701 881 SPPASNPLPLQ-PSLLSHRVGAHLNYPMHAFLAKKPQATSVENPQDTSFAPLAKPLPCDLHIVNFKVPRPSKYSQQEAED 959 (1050)
T ss_pred CCCCCCCCcCC-ccHHHHHHHHhhcCCchhhcccCccccccccccccccccccCCCCCcEEEEEeeccCCcccccccCCC
Confidence 33333344445 99999999999999999998654443222222 27999999999999999999999987643222233
Q ss_pred cceeEEEEeeccCcccccCCCCccccccccccchhhhcccCccceEEEccccCccccccccCCCCcccCCCCCCceEecc
Q 001061 1074 SRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKATSLNLLNDDIGMLGYPEQLEDVSQDGQVTIAP 1153 (1167)
Q Consensus 1074 ~r~~liL~r~~~d~~~~~~~~~~c~~~~~~~v~l~~LF~~~~v~~~~etsLt~~~~~~~~~~~~~~~~~~~~~~~v~L~P 1153 (1167)
.+++|||||+|+||+|+.+++.+|++++.++|+|.+||++++|.++++||||+||++.++++++.+.+...+.+.|.|+|
T Consensus 960 ~~~~~~l~r~~~d~~~~~~~~~~c~~~~~~~~~~~~lf~~l~~~~~~~tsl~~~~~~~~~~~~~~~~~~~~~~~~i~l~p 1039 (1050)
T PLN02701 960 PRFGLLLQRRGWDSSYCRKGGTQCTTLANEPVNLFDMFKDLAVSKVKATSLNLLHDDAEMLGYRKQAGSAAQEGIVLISP 1039 (1050)
T ss_pred ccEEEEEEecccCcccccCCCccCcccCCcccchhhhhcccceeeeecccccccccchhhccccccccccCCccceeecc
Confidence 56999999999999999999889998765669999999999999999999999999999999988887777888999999
Q ss_pred ceeeEEEEEEe
Q 001061 1154 MEIQAYKLEMR 1164 (1167)
Q Consensus 1154 MEIrTf~i~~~ 1164 (1167)
|||+||+|+|+
T Consensus 1040 mei~~~~~~~~ 1050 (1050)
T PLN02701 1040 MEIQAYKLDLR 1050 (1050)
T ss_pred ceeeeEEEecC
Confidence 99999999985
No 3
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.7e-198 Score=1712.61 Aligned_cols=908 Identities=31% Similarity=0.527 Sum_probs=755.2
Q ss_pred CCCCCCcceEEEEeeccccCccccccHHHHHH--------HHHHHHHHHHHHHHhcCCCCcEEEechHHHHHHHHhcCHH
Q 001061 149 GDEWDHEKLKIFVVPHSHNDPGWKLTVDEYYD--------RQSRHILDTIVETLSKDARRKFIWEEMSYLERWWRDSSES 220 (1167)
Q Consensus 149 ~~~~~~~~l~V~vVpHSH~D~GWl~T~deyy~--------~~v~~Ild~vv~~L~~dp~~kFi~~Eis~f~~Ww~~~~p~ 220 (1167)
|....+++++||||||||+|+|||||+||||+ ..||+|||+||++|.+||+||||++|++||.+||++|+++
T Consensus 29 ~~~~~~~~invHlVPHSHDDVGWLKTVDQyy~G~~n~Iq~AgVqyIldSVV~eLl~dp~RRFI~VE~aFF~rWW~~qS~~ 108 (996)
T KOG1959|consen 29 CHKVVPNMINVHLVPHSHDDVGWLKTVDQYYYGSKNKIQHAGVQYILDSVVEELLKDPNRRFIYVETAFFARWWNEQSET 108 (996)
T ss_pred CccccCceeEEEecCCccCccceeeeehhheecCCcccchhhHHHHHHHHHHHHhcCCccceehhhHHHHHHHHHhcCHH
Confidence 77778999999999999999999999999999 6799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHHHHhcC--CCCCcceecCCCCCchhHHHHHHHcCCc
Q 001061 221 QRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIG--FIPKNSWAIDPFGYSATMAYLLRRMGFE 298 (1167)
Q Consensus 221 ~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG--~~p~~gW~iDpFGhS~~~p~Ll~~~G~~ 298 (1167)
+|+.||+||++|||||+||||||||||++||.++||||++||+||+++|| .+|++||||||||||+.||+||++|||+
T Consensus 109 ~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG~cgrPrvgWqIDPFGHSreqAslfAqmGfd 188 (996)
T KOG1959|consen 109 QKEQVKKLVNEGRLEFIGGGWSMNDEATTHYQDVIDQFTLGLRFLKDTFGECGRPRVGWQIDPFGHSREQASLFAQMGFD 188 (996)
T ss_pred HHHHHHHHHhcCCEEEecCeeeecchhhhhHHHHHHHHHHHHHHHHHHhcccCCcceeeeeCCCCcchHHHHHHHHhCcc
Confidence 99999999999999999999999999999999999999999999999999 8899999999999999999999999999
Q ss_pred eeEeeccchhhHHHHhcCCcceEEEEecCCCCCCCceEEEecCCcccCCCCCCCCCCcccccccccccCCcccccCCCCC
Q 001061 299 NMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQ 378 (1167)
Q Consensus 299 ~~vi~Ri~~~~K~~~~~~k~~eF~Wr~s~~~~~gs~I~th~~p~y~Y~~p~tcgp~p~ic~~fDf~r~~g~~~~~cpw~~ 378 (1167)
+++|+||||++|..|..++.|||+|++|.+.++.++|||++|+. +| +|+|+|| ||.-. ...|..+
T Consensus 189 ~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iFTg~l~n-~Y------~~P~gfc--~dv~c------~d~Pi~D 253 (996)
T KOG1959|consen 189 GVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIFTGALYN-HY------SPPPGFC--FDVLC------GDDPIID 253 (996)
T ss_pred chheeecchhhHHHHHhhccceEEeecCccccchhhhhhhcccc-CC------CCCCCce--ecccc------CCCCCCC
Confidence 99999999999999999999999999999998999999999986 77 4678999 77421 0124444
Q ss_pred CCCCCCHhHHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCchhHHHHHHHhHHHHHHHHhcCC--CCCceEEECCH
Q 001061 379 NPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNP--SLNAEAKFGTL 456 (1167)
Q Consensus 379 ~p~~i~~~Nv~~ra~~ll~~~~k~s~~y~tn~lL~p~GdDf~y~~~~~a~~~f~n~~kli~~iN~~~--~~~~~i~~sTl 456 (1167)
+| .+.++||++|++.|++..+.++..|||||||+||||||+| ++|..||+||||||+|+|++. +..+++.||||
T Consensus 254 ~~-~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG~DFqY---~~A~v~fknmDkLI~yVN~~qa~gs~vnv~YSTp 329 (996)
T KOG1959|consen 254 GP-RSYDYNVKERVDDFVAYAKNQAAYYRTNHIMWPMGDDFQY---ENANVWFKNMDKLIKYVNERQADGSKVNVFYSTP 329 (996)
T ss_pred CC-CCCCccHHHHHHHHHHHHHHhHhheecceEEEeccCCcee---hhhhHHHhhHHHHHHHhhhhhcCCceEEEEEcCh
Confidence 43 3789999999999999999999999999999999999999 569999999999999999663 35899999999
Q ss_pred HHHHHHHHHHhhcccCCCCCccCCCCccCCCceecccccccccCCccceeeeecchhhhhhhHHHHHHHHHHHHHHHHHH
Q 001061 457 DDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLL 536 (1167)
Q Consensus 457 ~dYf~al~~~~~~~~~~~~ge~~~~~~~~~P~~~GDffpYad~~~~yWtGyyTSRp~~K~~~R~~e~~Lr~aE~L~sla~ 536 (1167)
+||++++++.. ..||+++.||||||++++.||||||||||.+|++.|.+.++|++|++|.++|.
T Consensus 330 scYl~alh~~~----------------~Twp~Kt~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~ 393 (996)
T KOG1959|consen 330 SCYLNALHAAN----------------QTWPVKTDDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAG 393 (996)
T ss_pred HHHHHHHHHhc----------------CcccccccccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcC
Confidence 99999999853 57999999999999999999999999999999999999999999999999985
Q ss_pred hhccccccccCChhHHHHHHHHHHHhhhhcccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 001061 537 GYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNL 616 (1167)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~L~~a~r~l~l~QHHDaItGTsk~~V~~Dy~~rL~~a~~~~~~vi~~al~~Ll~~~~~~~~~~ 616 (1167)
... . .....|+.+|++|+++|||||||||+|+||.+||+++|..|+..|+.++.+++..|+....
T Consensus 394 l~~-----~----~~~~dl~~Lream~i~QHHDAVTGTekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~~------ 458 (996)
T KOG1959|consen 394 LSS-----T----EQGPDLDYLREAMAIMQHHDAVTGTEKQHVADDYARRLADGILGAEKLARDALRKLTNLPN------ 458 (996)
T ss_pred CCc-----c----ccCccHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC------
Confidence 321 0 1124688899999999999999999999999999999999999999999999999986542
Q ss_pred ccccccccccccCCCCcceeeeccCCCcceEEEEcCCCcceeEEEEEEEecCcEEEEeCCCeEEEEeecccccc---CCc
Q 001061 617 SQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRH---GKS 693 (1167)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vvvfNpL~~~R~~vV~v~V~~~~v~V~d~~G~~V~~Qi~p~~~~---~~~ 693 (1167)
..|+.|.. .+...||.+. ..++...|++||||+|+++++|+|+|..++++|.|+.|++|++|++|.... ...
T Consensus 459 ~~f~~C~~-lNiS~C~~t~----~~~~~~~v~~YNpLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~~ 533 (996)
T KOG1959|consen 459 GEFQSCLL-LNISECAFTK----DGADNFIVTLYNPLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALES 533 (996)
T ss_pred ccchhhhh-hccccCCCCc----CCcCcEEEEEEcCCcceeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhhc
Confidence 24555542 2344454431 234578899999999999999999999999999999999999999997632 112
Q ss_pred ccccCcEEEEEEEecCCCeeEEEEEEcCccccCCCCccceeccCCCCCCCCCCCccccCCCCceEEeeCeEEEEEEccCc
Q 001061 694 KIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHG 773 (1167)
Q Consensus 694 ~~~~~~~~L~F~a~vPpLG~~ty~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IEN~~~~l~fd~~tG 773 (1167)
......|+|+|.|.|||+|+++|+|++..... .... ...+.+ .+.......|+|+++++.||.++|
T Consensus 534 ~~~~~~~eLvf~asvpplg~aty~i~k~~~~~----~~~~--~~~~~i--------~~~~~n~~~V~n~~~kl~fd~~tG 599 (996)
T KOG1959|consen 534 RNNDTKHELVFKASVPPLGIATYFIKKVASTE----RGSA--SHVRNI--------KKRESNATEVGNSHLKLVFDNDTG 599 (996)
T ss_pred cccCCCceEEEEEEecCccceEEEEeecCccc----cccc--cccccc--------ccccCcceEeccceEEEEEcCCCC
Confidence 33467899999999999999999998654321 1000 001111 111233478999999999999999
Q ss_pred eEEEEE-ccCCcEEEeeeeeeeecc-------CCCCceeeccCCCCcccccCCcEEEEEeCCceEEEEEeecccccCccE
Q 001061 774 LLQKIS-HINGSQNVVEEEIDMYSS-------QGSGAYLFMPNGDAHPITEAGGLMVISKGPLMEEAYSYPRTAWERSPI 845 (1167)
Q Consensus 774 lL~si~-~k~g~~~~v~~~f~~Y~s-------~~SGAYiF~P~g~~~~~~~~~~~~~v~~Gpl~sev~~~~~~~~~~s~i 845 (1167)
+|+++. +.+|....|.|+|.+|.+ +.||||+|+|...+.++.+....+.|+.|||+.||++.+. .|+
T Consensus 600 ~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~n~~q~SgAYiFRp~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~-----~wi 674 (996)
T KOG1959|consen 600 LLKTVEMNQTGVTENVDQEFGYYKGYRGDNDKQASGAYIFRPGQADIPIVSDQVELTVVDGPLVKEVHQQFN-----PWI 674 (996)
T ss_pred ceEEEEecccCcceeeeeeeEEEEeecCCcCCccCcceEecCCCCCccccccceEEEEecCchHHHHHHHHH-----HHH
Confidence 999988 456888899999999954 3499999999333445555556788999999999999862 479
Q ss_pred EEEEEEeeCCCccceeEEEEEEEeeeccC-CCCCcEEEEEEEeecCCCceEEEccCCccccccCc-----c---CCCCCC
Q 001061 846 SHSTRLYNGNNMIQEFLIEKEYHVELLSH-NFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRET-----Y---DKIPLQ 916 (1167)
Q Consensus 846 ~~~vrLy~~~~~~~~~~iEi~~~Vd~~~~-~~~n~El~~rf~T~I~s~~~fYTD~NG~q~ikR~~-----~---~~~pv~ 916 (1167)
+|++|||++.+ ++|+||.|++||. +..|||+|+||+|+|+|+++|||||||+||+||.. | ..+|++
T Consensus 675 SQviRvy~g~~-----~~E~Ew~VGpIp~~d~~gkEvVtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiA 749 (996)
T KOG1959|consen 675 SQVIRVYEGKN-----HVEFEWLVGPIPIDDGIGKEVVTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIA 749 (996)
T ss_pred hheeEecCCCc-----ceEEEEEecceecCCCccceEEEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCcccc
Confidence 99999999987 7999999999995 67899999999999999999999999999999943 2 258999
Q ss_pred cceEeccceEEEecCCCCeeEEeecCCcceeeccCCeEEEEEccccccCCCCCCCcCccCCcce----eE--EEEEEEec
Q 001061 917 GNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRDDGRGLGQGVLDNRAM----NV--VFHILVES 990 (1167)
Q Consensus 917 ~NyYP~~s~a~I~D~~~~rltvltdrs~G~sSl~~G~lElmL~RRl~~DD~rGlge~l~Dn~~~----~~--~f~llle~ 990 (1167)
||||||++.+||||++ .||+||+||++|+||++||+|||||||||+.||+|||||+|+|+... .. ++.+++..
T Consensus 750 GNYYPvt~~i~lqD~~-~rl~vL~DRAqGgsSl~dG~lElMLHRRl~~DD~~Gv~EaLnEt~~~~~gL~~rGk~~~~l~~ 828 (996)
T KOG1959|consen 750 GNYYPVTSRIYLQDSK-KRLSVLNDRAQGGSSLKDGQLELMLHRRLLNDDGRGVGEALNETVYGHAGLIARGKLYVLLDK 828 (996)
T ss_pred ccccccceeeEEecCC-ceEEEEeecccCCccccCCeEEEEeeehhhcccccccchhcccccccccceEEeeeEEEEEec
Confidence 9999999999999996 89999999999999999999999999999999999999999997533 22 33444432
Q ss_pred ccccCccCCCCCcccCcchhhhhccccccccceeeeccCCCCCcCC---CCCCCcCCCCCCCCCceeEEeeecCCCCCCC
Q 001061 991 NISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQ---PPPRSFSPLAGSLPCDLHIVNFKVPRPSKYS 1067 (1167)
Q Consensus 991 ~~~~~~~~~~~~~~~~psl~sh~~~~~l~~P~~~~~~~~~~~~~~~---~~~~~fs~l~~~LP~dvHLltLr~~~~~~~~ 1067 (1167)
... ..... ...+.+++..|++.|+++.....+.. .+-..|++ ...||.+||||||+.+++..
T Consensus 829 ~~d--~a~~~----------~r~~~~ei~~P~~~~f~~~~~~~~~~~~s~~~~~f~~-~~~lP~~vhLlTLe~~~~~~-- 893 (996)
T KOG1959|consen 829 AGD--GATGW----------RRLAEQEIHLPLWKFFSKPEGGEALNSLSIPGSAFSG-SYDLPQSVHLLTLEEWSKDE-- 893 (996)
T ss_pred ccc--cchhh----------hhhhhhhcccHHHHHhhcCCCccchhhcCCCcccccc-ccCCCcceeeeecccCCCCc--
Confidence 221 11111 12346688889999988765433321 11223677 67899999999999988643
Q ss_pred CCCCCccceeEEEEeeccCcccccCCCCccccccccccchhhhcccCccceEEEccccCccccc--cccCCCCcc-c---
Q 001061 1068 QQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKATSLNLLNDDI--GMLGYPEQL-E--- 1141 (1167)
Q Consensus 1068 ~~~~~~~r~~liL~r~~~d~~~~~~~~~~c~~~~~~~v~l~~LF~~~~v~~~~etsLt~~~~~~--~~~~~~~~~-~--- 1141 (1167)
.|||.+|+ | +.+++. ..+...+|+|++||..++|..|+||||+++.... ++.+|.+.. +
T Consensus 894 ----------vLlRleh~---~-e~gED~-~~s~vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~mkr~k~~~~~~G~~~ 958 (996)
T KOG1959|consen 894 ----------VLLRLEHL---Y-EVGEDS-ELSQVVSFNLRKLFSALDIVEIRETTLDGNQPLSDMKRFKFHWDVSGEKP 958 (996)
T ss_pred ----------eEeeehhh---h-hccccc-ccCcceEEEhHHhhcccCeeEEEEeeccCccChhhhhhhccccCCCCCCC
Confidence 24555554 2 344332 1122457999999999999999999997776654 445555542 1
Q ss_pred -----------CCC--CCCceEeccceeeEEEEEEeeC
Q 001061 1142 -----------DVS--QDGQVTIAPMEIQAYKLEMRPN 1166 (1167)
Q Consensus 1142 -----------~~~--~~~~v~L~PMEIrTf~i~~~~~ 1166 (1167)
+.. ....|+|.|||||||+|+++++
T Consensus 959 ~~~~~~~s~~~p~~~~~~~~vtL~PmeIRTfii~~~~~ 996 (996)
T KOG1959|consen 959 SGVEYSTSRHKPLDKTSEFIVTLHPMEIRTFIIKFQQK 996 (996)
T ss_pred CCccccccCCCCCCcccceEEEEeccEEEEEEEEEecC
Confidence 011 1226899999999999998763
No 4
>PRK09819 alpha-mannosidase; Provisional
Probab=100.00 E-value=8.5e-94 Score=915.12 Aligned_cols=657 Identities=19% Similarity=0.263 Sum_probs=528.0
Q ss_pred cceEEEEeeccccCccccccHHHHHHHHHHHHHHHHHHHHhcCCCCcEEE--echHHHHHHHHhcCHHHHHHHHHHHHCC
Q 001061 155 EKLKIFVVPHSHNDPGWKLTVDEYYDRQSRHILDTIVETLSKDARRKFIW--EEMSYLERWWRDSSESQRASFTNLVKNG 232 (1167)
Q Consensus 155 ~~l~V~vVpHSH~D~GWl~T~deyy~~~v~~Ild~vv~~L~~dp~~kFi~--~Eis~f~~Ww~~~~p~~k~~vk~LV~~G 232 (1167)
++++||+|||||||+|||||++++....+ .+|++|++.|++||+++|.+ +|++++++|| +..|+++++||+||++|
T Consensus 2 ~~~~v~~v~HtH~D~~Wl~~~~~~~~~~~-~~~~~vl~lle~~p~~~f~~~d~q~~~l~~~~-~~~Pe~~~~ik~lV~~G 79 (875)
T PRK09819 2 AKSKVHIVPHMHWDREWYFTTERSRILLV-NNMEEILDRLEQDNDYKYYVLDGQTSLLEDYL-AVKPEDKERVKKLVQAG 79 (875)
T ss_pred CceEEEEeCCCCCChhhcCChHHhHHHHH-HHHHHHHHHHHhCCCcceEEEchhHHHHHHHH-HhChHHHHHHHHHHHcC
Confidence 35789999999999999999999987766 56999999999999999864 4899999999 78999999999999999
Q ss_pred cEEEecceeccccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCchhHHHHHHHcCCceeEeeccchhhHHH
Q 001061 233 QLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKE 312 (1167)
Q Consensus 233 qLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~vi~Ri~~~~K~~ 312 (1167)
||+ +||||||+||+++|+|||||||++||+|+ ++||..|++||+|||||||++|||||++|||+++++||+...
T Consensus 80 rl~-~G~W~v~~D~~l~sgEsliRqll~G~~~~-~~fG~~~~vgwlpD~FG~s~~lPqIl~~~Gi~~~~~wr~~~~---- 153 (875)
T PRK09819 80 KLI-IGPWYTQTDQLVVSGESIVRNLLYGIRDC-REFGEPMKIGYLPDSFGQSGQMPQIYNGFGITRTLFWRGVSD---- 153 (875)
T ss_pred CEe-ECcEEeecccccCCHHHHHHHHHHHHHHH-HHcCCCCceeeecCCCCCcHHHHHHHHhCCCCeEEEEecccc----
Confidence 994 57777999999999999999999999999 699999999999999999999999999999999999997432
Q ss_pred HhcCCcceEEEEecCCCCCCCceEEEecCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCCHhHHHHHH
Q 001061 313 LALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERA 392 (1167)
Q Consensus 313 ~~~~k~~eF~Wr~s~~~~~gs~I~th~~p~y~Y~~p~tcgp~p~ic~~fDf~r~~g~~~~~cpw~~~p~~i~~~Nv~~ra 392 (1167)
....+..+|+|+ ++|||+||||+||. +|.. |. . .+.+..++++++
T Consensus 154 ~~~~~~~~F~W~----g~DGs~V~t~~~~~-~Y~~----g~------------------------~--~~~~~~~~~~~~ 198 (875)
T PRK09819 154 RHGTDKTEFLWQ----SDDGSEVLAQQLPL-GYAI----GK------------------------Y--LPEDEEELKKRL 198 (875)
T ss_pred cccCCCceEEEE----CCCCCeEEEEECcc-cccc----CC------------------------C--CCcCHHHHHHHH
Confidence 111357899999 58999999999985 5521 10 0 124567899999
Q ss_pred HHHHHHHHhhcccccCCeEEEEecCCCCCCchhHHHHHHHhHHHHHHHHhcCCCCCceEEECCHHHHHHHHHHHhhcccC
Q 001061 393 LKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINY 472 (1167)
Q Consensus 393 ~~ll~~~~k~s~~y~tn~lL~p~GdDf~y~~~~~a~~~f~n~~kli~~iN~~~~~~~~i~~sTl~dYf~al~~~~~~~~~ 472 (1167)
+.+++.+++++ .++++|+|+|+|+++.. +|+.++++.+|.... .+++++||+++||++++++.
T Consensus 199 ~~~~~~~~~~~---~~~~~l~~~G~d~~p~~--------~~~~e~i~~~~~~~~-~~~~~~st~~~yf~~l~~~~----- 261 (875)
T PRK09819 199 DEYFGVLEKKS---STKNILLPNGHDQMPLQ--------KNLFEVMDKLNEIYP-EREFVISRFENVFEKLEKQR----- 261 (875)
T ss_pred HHHHHHHhhcC---CCCcEEEecCCCCCccc--------ccHHHHHHHHHhhCC-CCcEEECCHHHHHHHHHhhc-----
Confidence 99999988876 68999999999998753 467788888887653 47899999999999998742
Q ss_pred CCCCccCCCCccCCCceeccccc--ccccCCccceeeeecchhhhhhhHHHHHHHHH-HHHHHHHHHhhccccccccCCh
Q 001061 473 SRPGEIGSGQVEGFPSLSGDFFT--YADRQQDYWSGYYVSRPFFKAVDRVLEQTLRA-TEMMVALLLGYCQRAQCEKLPM 549 (1167)
Q Consensus 473 ~~~ge~~~~~~~~~P~~~GDffp--Yad~~~~yWtGyyTSRp~~K~~~R~~e~~Lr~-aE~L~sla~~~~~~~~~~~~~~ 549 (1167)
..+|++.|||+. |. .+++||||||+.+|+++|++|++|+. +|+|.++|... +..||
T Consensus 262 -----------~~lp~~~GEl~~~~y~----~~HrG~~TSr~~iK~~nr~~E~~L~~~~E~l~~la~~~-----g~~yp- 320 (875)
T PRK09819 262 -----------DNLPTLKGEFIDGKYM----RVHRSIFSTRMDIKIANARIENKIVNVLEPLASIAYSL-----GFEYP- 320 (875)
T ss_pred -----------CCCCeeeeecCCCccc----cccCCccccHHHHHHHHHHHHHHHHHHhchHHHHHHHc-----CCCCC-
Confidence 369999999983 33 46699999999999999999999985 99999998542 34677
Q ss_pred hHHHHHHHHHHHhhhhcccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCccccccccccccC
Q 001061 550 SFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYD 629 (1167)
Q Consensus 550 ~~~~~L~~a~r~l~l~QHHDaItGTsk~~V~~Dy~~rL~~a~~~~~~vi~~al~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 629 (1167)
...|++||+.|+++||||+||||++++|++|+..|+.++.+.++.+++.++..|....
T Consensus 321 --~~~l~~~Wk~ll~nq~HD~i~G~sid~V~~d~~~r~~~~~~~~~~l~~~~l~~l~~~i-------------------- 378 (875)
T PRK09819 321 --HGLLEKIWKEMFKNHAHDSIGCCCSDTVHRDIVARYKLAEDLADNLLDFYMRKIADNM-------------------- 378 (875)
T ss_pred --HHHHHHHHHHHHHhcCCCcccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------------
Confidence 5689999999999999999999999999999999999999999999999998886421
Q ss_pred CCCcceeeeccCCCcceEEEEcCCCcceeEEEEEEEe--cCcEEEEeCCCeEEEEeeccccccC-----------Ccccc
Q 001061 630 AQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIVN--RPDITVLDSNWTCVQSQISPELRHG-----------KSKIF 696 (1167)
Q Consensus 630 ~~~~~~~i~~~~~~~~~vvvfNpL~~~R~~vV~v~V~--~~~v~V~d~~G~~V~~Qi~p~~~~~-----------~~~~~ 696 (1167)
..+....++||||++|+|+++|++++. .+.+.|.|.+|++|++|+....... .....
T Consensus 379 ----------~~~~~~~~~vfN~l~~~r~~~v~i~~~~~~~~~~~~d~~g~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 448 (875)
T PRK09819 379 ----------PQSDADKLTVFNLLPYEREEVINTTVYLPASQFTLRDDRGNPLPYTIREKRDIDPGLLDRQIVHYGNYDP 448 (875)
T ss_pred ----------CcCCCCEEEEEcCCCccceeEEEEEEEeccCCEEEECCCCCEeeEEEeeccccccchhhcceeccCCCCc
Confidence 112346799999999999999998774 5678999999999999997432100 00000
Q ss_pred cCcEEEEEEE-ecCCCeeEEEEEEcCccccCCCCccceeccCCCCCCCCCCCccccCCCCceEEeeCeEEEEEEccCceE
Q 001061 697 TGRHRLHWKA-TIPALGLQVYYIANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLL 775 (1167)
Q Consensus 697 ~~~~~L~F~a-~vPpLG~~ty~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IEN~~~~l~fd~~tGlL 775 (1167)
..++.+.|.+ +||||||++|.+...... +... ........|||++|+|+||+ +|.|
T Consensus 449 ~~~~~i~f~~~~vP~lG~~~~~i~~~~~~-----~~~~-----------------~~~~~~~~ieN~~~~v~i~~-~G~l 505 (875)
T PRK09819 449 FMEFDIQINVQILPAMGYRTLYIELNEEG-----NVIE-----------------PKSSAEGIIENEFYQITLNE-NGTL 505 (875)
T ss_pred eEEEEEEEEECCCCCcccEEEEEEeCCcc-----cccc-----------------ccccccceEecCcEEEEEec-CCcE
Confidence 1256889985 899999999998754211 0000 01224568999999999996 6999
Q ss_pred EEEE-ccCCcEEEeeeeeeeecc--CCCCceeeccCCCCcccccC--CcEEEEEeCCceEEEEEeeccc-----------
Q 001061 776 QKIS-HINGSQNVVEEEIDMYSS--QGSGAYLFMPNGDAHPITEA--GGLMVISKGPLMEEAYSYPRTA----------- 839 (1167)
Q Consensus 776 ~si~-~k~g~~~~v~~~f~~Y~s--~~SGAYiF~P~g~~~~~~~~--~~~~~v~~Gpl~sev~~~~~~~----------- 839 (1167)
+ |. +++|++. .++..|.+ +.++||+|.|......+... ...+.+++||+++++.+...-.
T Consensus 506 ~-l~dk~~gr~~---~~~~~~~d~~d~gD~yd~~p~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~~~~~p~~~~~r~~~ 581 (875)
T PRK09819 506 T-IVDKKSGKTY---DRQLIIEENGDDGDEYDYSPPREDWVITSAEAVPSVEISHSAWQSRAVIRYRLAVPKNLEERAAG 581 (875)
T ss_pred E-EEECCCCcEE---eceEEEEecCcCCCCcccCCCCCCCEEeccCCcceEEEEEcCCeEEEEEEEEEeCCcChhhHhhc
Confidence 4 66 4567765 23444443 34789999987654443332 2346778899998887654311
Q ss_pred --ccCccEEEEEEEeeCCCccceeEEEEEEEeeeccCCCCCcEEEEEEEeecCCCceEEEccCCccccccCccCC--CCC
Q 001061 840 --WERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDK--IPL 915 (1167)
Q Consensus 840 --~~~s~i~~~vrLy~~~~~~~~~~iEi~~~Vd~~~~~~~n~El~~rf~T~I~s~~~fYTD~NG~q~ikR~~~~~--~pv 915 (1167)
...+.++++++|+++++ +|||.+.||+. ..+|.|.+.|+++|.+.. .+.| .+|++++|++..+ .+.
T Consensus 582 ~~~~~~~i~~~i~L~~~s~-----~i~~~~~vdw~---~~~~~Lrv~fp~~i~~~~-~~~d-~~fG~i~Rp~~~~~~~~W 651 (875)
T PRK09819 582 QKTGRMPVKLVVTLSKNSR-----RIDFDVNLDNQ---ADDHRLRVLFPTEIASKF-SLAD-QQFGSITRPVNDPAMDVW 651 (875)
T ss_pred cccceEEEEEEEEEecCCC-----EEEEEEEEecc---ccceEEEEEccCCCCCCc-eEcC-CCceEEECCCcCcccccc
Confidence 12467999999999997 79999999985 468999999999999885 5668 8999999987532 111
Q ss_pred --------CcceEeccceEEEecCCCCeeEEeecCCcceeeccC--CeEEEEEcccc
Q 001061 916 --------QGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKD--GWLEIMLDRRL 962 (1167)
Q Consensus 916 --------~~NyYP~~s~a~I~D~~~~rltvltdrs~G~sSl~~--G~lElmL~RRl 962 (1167)
.-+.|||.+++.|.|.+ .+++|++|+.+|..-..+ +.|.|+|.|..
T Consensus 652 ~~~~~~e~p~~~~~~~~~v~ls~~~-~Gvall~dg~~ey~v~g~~~~~i~LTLlRs~ 707 (875)
T PRK09819 652 EQEGWQEAPISIEPMQSFVALHDER-HGVAVFTEGVREYEIIGENYDTIALTLFRGV 707 (875)
T ss_pred ccccceeCCCCChhhhceEEEecCC-ceEEEECCCcceEEEecCCCCeEEEEeeccc
Confidence 11457999999999985 799999999999876543 38999999986
No 5
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-66 Score=585.28 Aligned_cols=638 Identities=18% Similarity=0.275 Sum_probs=492.1
Q ss_pred cceEEEEeeccccCccccccHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcE
Q 001061 155 EKLKIFVVPHSHNDPGWKLTVDEYYDRQSRHILDTIVETLSKDARRKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQL 234 (1167)
Q Consensus 155 ~~l~V~vVpHSH~D~GWl~T~deyy~~~v~~Ild~vv~~L~~dp~~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqL 234 (1167)
.+-+||-|+|.|.|..|||+|.|..++.||. ..+.+..|+++|+++|+.+|. .-.+|.++.+|+..++++..+..||+
T Consensus 279 s~~nv~aiGhCHIDTAWLWPFaETrRKivRS-W~tq~~lMdR~PEy~FvcSQA-qQ~~WlkedhP~~f~kl~e~~~q~qF 356 (1078)
T KOG4342|consen 279 SQHNVHAIGHCHIDTAWLWPFAETRRKIVRS-WVTQLQLMDRNPEYIFVCSQA-QQLEWLKEDHPGLFSKLQEFACQGQF 356 (1078)
T ss_pred cccceeeeccccccchhhcChHHHHHHHHHH-HHHHHhHHhhCcceeEehhhH-HHHHHHhhhChhHHHHHHHHHhcCce
Confidence 3679999999999999999999999999998 799999999999999999984 44569999999999999999999999
Q ss_pred EEecceeccccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCchhHHHHHHHcCCceeEeeccchhhHHHHh
Q 001061 235 EIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELA 314 (1167)
Q Consensus 235 EivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~vi~Ri~~~~K~~~~ 314 (1167)
-.|||.||++|.+++++||||||++.|+.|+.++||+.-+.-|.+|+||+|++||||.+.+||+.++.|++.|+.-+.++
T Consensus 357 ~pvGGtWVE~DtNiPsGEslvRQFl~GQ~FFlkeFG~~c~~FWLPDTFGYSsQ~PQicrlcGidrFLTQKLSWNniNSFP 436 (1078)
T KOG4342|consen 357 VPVGGTWVEMDTNIPSGESLVRQFLQGQNFFLKEFGKMCSEFWLPDTFGYSSQLPQICRLCGIDRFLTQKLSWNNINSFP 436 (1078)
T ss_pred eeccceEEecCCCCCChHHHHHHHHhhhhHHHHHhhhhhcceeccccccccchhhHHHHhhcHHHHHHhhccccccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998766664
Q ss_pred cCCcceEEEEecCCCCCCCceEEEecCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCCHhHHHHHHHH
Q 001061 315 LHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALK 394 (1167)
Q Consensus 315 ~~k~~eF~Wr~s~~~~~gs~I~th~~p~y~Y~~p~tcgp~p~ic~~fDf~r~~g~~~~~cpw~~~p~~i~~~Nv~~ra~~ 394 (1167)
+..|.|. +.|||.++|||.|..+|.. + .+|. .+.+
T Consensus 437 ---hsTFnW~----glDGSqvl~HmPPgntYta------d-------------------------------~~v~-dVL~ 471 (1078)
T KOG4342|consen 437 ---HSTFNWE----GLDGSQVLVHMPPGNTYTA------D-------------------------------GSVE-DVLK 471 (1078)
T ss_pred ---ccceeee----eccCceEEEecCCCCcccc------c-------------------------------CcHH-HHHH
Confidence 7889999 5899999999999767632 1 1232 2344
Q ss_pred HHHHHHhhcccccCCeEEEEecCCCCCCchhHHHHHHHhHHHHHHHHhcCCCCCceEEEC-CHHHHHHHHHHHhhcccCC
Q 001061 395 LLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFG-TLDDYFRTLREEADRINYS 473 (1167)
Q Consensus 395 ll~~~~k~s~~y~tn~lL~p~GdDf~y~~~~~a~~~f~n~~kli~~iN~~~~~~~~i~~s-Tl~dYf~al~~~~~~~~~~ 473 (1167)
-++|-+.+. .+....+|+..||.+++|+.++.+. +.+ |+-+|......+++|.| |+.+||+++.+..++
T Consensus 472 tv~qnk~~~-~~~~gl~lfG~GDGGGGPT~eML~k----lrR-~r~~~Nt~G~lP~vqlg~tvdeffd~ilkrtnq---- 541 (1078)
T KOG4342|consen 472 TVAQNKDKG-RANHGLFLFGFGDGGGGPTQEMLDK----LRR-IRSLSNTDGVLPRVQLGITVDEFFDAILKRTNQ---- 541 (1078)
T ss_pred HHHhcCCcc-ccCcceEEEEecCCCCCCcHHHHHH----HHH-hhcccccCCcccceeecCCHHHHHHHHHhhhcc----
Confidence 455555444 2455678889999999999777542 322 33454443467899999 999999999987542
Q ss_pred CCCccCCCCccCCCceecccccccccCCccceeeeecchhhhhhhHHHHHHHHHHHHHHHHHHhhccccccccCChhHHH
Q 001061 474 RPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAY 553 (1167)
Q Consensus 474 ~~ge~~~~~~~~~P~~~GDffpYad~~~~yWtGyyTSRp~~K~~~R~~e~~Lr~aE~L~sla~~~~~~~~~~~~~~~~~~ 553 (1167)
...+|+|.|++|- +++.|.|||++.+|++.|++|..|..+|.++++|.... ....|| .+
T Consensus 542 ---------g~~LptW~GELyf------EfHrGTYTtqAq~KKlmR~~Ei~LHD~E~~sslas~~s---~dy~YP---~~ 600 (1078)
T KOG4342|consen 542 ---------GHDLPTWVGELYF------EFHRGTYTTQAQIKKLMRECEIILHDVELLSSLASARS---ADYLYP---AA 600 (1078)
T ss_pred ---------CCcccccchheEE------EEecCceeeHHHHHHHHHHHHHHhhhHHHHHHHHHhhc---ccccCc---HH
Confidence 2469999999996 89999999999999999999999999999999986542 235688 57
Q ss_pred HHHHHHHHhhhhcccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCccccccccccccCCCCc
Q 001061 554 KLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPV 633 (1167)
Q Consensus 554 ~L~~a~r~l~l~QHHDaItGTsk~~V~~Dy~~rL~~a~~~~~~vi~~al~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (1167)
.|.++||.++|+|+||.++|++++.|++|..-.|.+.+..++.++..+++.|...
T Consensus 601 qlq~LWr~~LLcQFHDVlpGSCIeMVykeA~p~~~~v~k~~~tLl~~a~~~L~as------------------------- 655 (1078)
T KOG4342|consen 601 QLQHLWRLLLLCQFHDVLPGSCIEMVYKEAMPHYEDVRKHGNTLLSAAAAALCAS------------------------- 655 (1078)
T ss_pred HHHHHHHHHHHHHhcccCCcHHHHHHHHhhhhHHHHHHHhhHHHHHHHHHHHhcC-------------------------
Confidence 8999999999999999999999999999999999999999999999999887431
Q ss_pred ceeeeccCCCcceEEEEcCCCcceeEEEEEEEecCcEEEEeCCCeEEEEeeccccccCCcccccCcEEEEEEEecCCCee
Q 001061 634 HKVINVHEGTSQSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGL 713 (1167)
Q Consensus 634 ~~~i~~~~~~~~~vvvfNpL~~~R~~vV~v~V~~~~v~V~d~~G~~V~~Qi~p~~~~~~~~~~~~~~~L~F~a~vPpLG~ 713 (1167)
+.....+++.|+|+|.|.+|+.++-+.. .+. .-..++|.+|+
T Consensus 656 -------~s~ke~L~~~nTLpW~~~~v~~~~kp~k----------~~~---------------------~e~c~~~g~~t 697 (1078)
T KOG4342|consen 656 -------ESGKEGLLIVNTLPWKRIEVMALPKPGK----------AHS---------------------LELCTVPGMGT 697 (1078)
T ss_pred -------CCCccceEEEeccccceeeeecccCCCC----------cee---------------------EEEeccCCccc
Confidence 1123468999999999999887663221 110 01235676665
Q ss_pred EEEEEEcCccccCCCCccceeccCCCCCCCCCCCccccCCCCceEEeeCeEEEEEEccCceEEEEEcc-CCcEEE-----
Q 001061 714 QVYYIANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKISHI-NGSQNV----- 787 (1167)
Q Consensus 714 ~ty~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IEN~~~~l~fd~~tGlL~si~~k-~g~~~~----- 787 (1167)
+...- ...|. +.. ...+.++|.|+.+|+++++ +|.|.|+.+. .|++..
T Consensus 698 a~vt~--------~~~p~---------------~~y--q~Dd~~~L~Ng~lrV~i~p-~G~itSl~d~~~grE~ld~~~G 751 (1078)
T KOG4342|consen 698 APVTP--------PTSPV---------------FVY--QTDDSVTLDNGILRVKIDP-TGRITSLVDVASGREALDTAEG 751 (1078)
T ss_pred cCCCC--------CCCce---------------eEE--ecCCeEEEECCEEEEEECC-CCceeeeeehhcccchhccccc
Confidence 42110 00111 100 1345689999999999998 6999999852 344332
Q ss_pred ---ee-eeeeeeccCC--CCceeeccCC-CCcccccCCc-EEEEEeCCceEEEEEeecccccCccEEEEEEEeeCCCccc
Q 001061 788 ---VE-EEIDMYSSQG--SGAYLFMPNG-DAHPITEAGG-LMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQ 859 (1167)
Q Consensus 788 ---v~-~~f~~Y~s~~--SGAYiF~P~g-~~~~~~~~~~-~~~v~~Gpl~sev~~~~~~~~~~s~i~~~vrLy~~~~~~~ 859 (1167)
++ ++|..|.+.+ -.||+-.--. +..++..... ..+-.+|+++..|.+..+- -+.+.++++|.|-.+.....
T Consensus 752 rn~~GaNQfVlfdD~PL~WqAWDte~ysle~y~vl~k~k~v~v~~~g~lr~sv~v~~qI-Se~s~~k~~isL~~~~~~ak 830 (1078)
T KOG4342|consen 752 RNAVGANQFVLFDDVPLYWQAWDTEDYSLERYPVLGKAKTVAVGTEGGLRGSVWVLLQI-SENSRLKQEISLDVGCTDAK 830 (1078)
T ss_pred ccccCcccEEEecCCccchhhhhhhhhceecceecCCCceEEeecCCCcceEEEEEEEc-CcccccceEEEEeccccccc
Confidence 33 7888887643 3455432111 2345555444 4566899999888766531 14578888888865542111
Q ss_pred eeEEEEEEEeeeccCCCCCcEEEEEEEeecCCCceEEEccCCccccccCccCCCCCCcceEecc--ceEEEecCCCCeeE
Q 001061 860 EFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIPLQGNYYPMP--ALAFMQGSNGQRFS 937 (1167)
Q Consensus 860 ~~~iEi~~~Vd~~~~~~~n~El~~rf~T~I~s~~~fYTD~NG~q~ikR~~~~~~pv~~NyYP~~--s~a~I~D~~~~rlt 937 (1167)
=-.|.|...|+|. ..+|-+.+.|+.+|.|.-..|. ..|++.+|+|+-+......-+-|- .+|...|- +.+++
T Consensus 831 ~~~V~f~teV~Wh---e~~KFLKVEFPv~irs~fAsYE--tQFGitkRPTHYNTSWDvAkFEVchhkfaDySe~-~~Gvs 904 (1078)
T KOG4342|consen 831 LPYVRFHTEVHWH---EAHKFLKVEFPVRIRSSFASYE--TQFGITKRPTHYNTSWDVAKFEVCHHKFADYSEH-GFGVS 904 (1078)
T ss_pred CCceeeEEEEeeh---hcCceEEeeccccccccchhhh--hhcccccCCccccccchhhHhHHHHhhhhhhhhc-cccee
Confidence 1258888888884 4689999999999999755564 579999999865443322222222 23444544 58999
Q ss_pred EeecCCcceeeccCCeEEEEEccccccCCC
Q 001061 938 VHSRQSLGVASLKDGWLEIMLDRRLSRDDG 967 (1167)
Q Consensus 938 vltdrs~G~sSl~~G~lElmL~RRl~~DD~ 967 (1167)
||+|+.+|.| ....-|.+-|.|..-..|.
T Consensus 905 ~LNDCKYGfS-thGnlmrLSLLRsPKaPDA 933 (1078)
T KOG4342|consen 905 LLNDCKYGFS-THGNLMRLSLLRSPKAPDA 933 (1078)
T ss_pred eecccccccc-cccceeeehhhcCCCCCCc
Confidence 9999999965 6788889999999988884
No 6
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). Lysosomal alpha-mannosidase is necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover. The enzyme catalyses the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides, and can cleave all known types of alpha-mannosidic linkages. Defects in the gene cause lysosomal alpha-mannosidosis (AM), a lysosomal storage disease characterised by the accumulation of unbranched oligo-saccharide chains.; GO: 0004559 alpha-mannosidase activity, 0005975 carbohydrate metabolic process; PDB: 2WYI_A 2WYH_A 1O7D_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=6.4e-59 Score=523.15 Aligned_cols=272 Identities=34% Similarity=0.612 Sum_probs=219.1
Q ss_pred EEEEeeccccCccccccHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEe
Q 001061 158 KIFVVPHSHNDPGWKLTVDEYYDRQSRHILDTIVETLSKDARRKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIV 237 (1167)
Q Consensus 158 ~V~vVpHSH~D~GWl~T~deyy~~~v~~Ild~vv~~L~~dp~~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEiv 237 (1167)
+||||||||+|+||++|+++| ...+..+|+++++.|++||++||+|+|++++++||+ ..|+.++++|+||++||||||
T Consensus 1 ~v~~i~HsH~D~~W~~t~~~~-~~~~~~~~~~~l~~l~~~~~~~f~~~~~~~~~~~~~-~~p~~~~~~~~lv~~Gri~~v 78 (275)
T PF01074_consen 1 TVHVIPHSHWDRGWLWTFEEY-RRYLVNILDSVLDLLEEDPDFRFIDGQTAYLEDYLE-DAPEEFKRIKKLVKEGRIEIV 78 (275)
T ss_dssp EEEEEEEEB--SSSSS-HHHH-HHHHHHHHHHHHHHHHH-TT--EECTBCHHHHHHHH-CSGHHHHHHHHHHHTTSEEES
T ss_pred CEEEccccccchhhcccHHHH-HHHHHHHHHHHHHHHHhCCcceEeechhHHHHHHHH-hCCHHHHHHHHHHHhceeEEe
Confidence 799999999999999999999 566778899999999999999999999999999995 588999999999999999999
Q ss_pred cceeccccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCchhHHHHHHHcCCceeEeeccchhhHHHHhcCC
Q 001061 238 GGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQ 317 (1167)
Q Consensus 238 gGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~vi~Ri~~~~K~~~~~~k 317 (1167)
||||||+||+++++|++||||++|++|++++||+.|++||++|+||||++||+||+++||++++++|+++..+..+..++
T Consensus 79 gg~~~~~D~~l~~~Eslirql~~G~~~~~~~fg~~~~~~~~~D~FG~~~~lP~il~~~Gi~~~v~~r~~~~~~~~~~~~~ 158 (275)
T PF01074_consen 79 GGWYVQPDENLPSGESLIRQLLYGHKYLRKEFGVRPKVAWQPDSFGHSAQLPQILKQFGIKYFVIWRISWNDKNPFKANP 158 (275)
T ss_dssp SSBSS-B-SSSS-HHHHHHHHHHHHHHHHHHHTG--SEEEESSSSSB-TCHHHHHHTTT-SEEEESSS-HHHHHHHHHTT
T ss_pred CceeeeccccCCCHHHHHHHHhhhHHHHHHhcCCCCCeEEeCCCCCCchhhHHHHhccCcceEEEeccccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888889
Q ss_pred cceEEEEecCCCCCCCceEEEecCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCCHhHHHHHHHHHHH
Q 001061 318 NLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLD 397 (1167)
Q Consensus 318 ~~eF~Wr~s~~~~~gs~I~th~~p~y~Y~~p~tcgp~p~ic~~fDf~r~~g~~~~~cpw~~~p~~i~~~Nv~~ra~~ll~ 397 (1167)
.++|+|+ ++||++||||++|.+.|+ +..||+| +++..+++
T Consensus 159 ~~~F~W~----g~dGs~ilt~~~~~~y~~--------~~~~~~~----------------------------~~~~~~~~ 198 (275)
T PF01074_consen 159 QSEFYWQ----GPDGSEILTHVLPNYYYG--------PWYGSEF----------------------------EDADELLE 198 (275)
T ss_dssp SSEEEEE-----TTSTEEEEEE-TST-TS--------HHTTCCH----------------------------HHHHHHHH
T ss_pred CceEEEe----cCCCcceeEEecccCCCC--------CCCCccc----------------------------ccHHHHHH
Confidence 9999999 588999999999964332 2344322 34577888
Q ss_pred HHHhhcccccCCeEEEEecCCCCCCchhHHHHHHHhHHHHHHHHhcC--CCCCceEEECCHHHHHHHHHHHhhcccCCCC
Q 001061 398 QYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSN--PSLNAEAKFGTLDDYFRTLREEADRINYSRP 475 (1167)
Q Consensus 398 ~~~k~s~~y~tn~lL~p~GdDf~y~~~~~a~~~f~n~~kli~~iN~~--~~~~~~i~~sTl~dYf~al~~~~~~~~~~~~ 475 (1167)
++++.+..+.++++|+|+|+| +.++.++++++++||.. ....+++++||+++||++|+++
T Consensus 199 ~~~~~~~~~~~~~~l~~~G~d---------~~~~~~~~~~~~~i~~~~~~~~~~~i~~sT~~~yf~~l~~~--------- 260 (275)
T PF01074_consen 199 QLRKLAKKYYTNNILIPYGDD---------DDGGPPDEELIEYINEWNEEYPGPKIKYSTLSEYFEALEKE--------- 260 (275)
T ss_dssp HHHHHHCCSSSSEEEEEEEEE---------HHHHHHHHHHHHHHHHHHHHGCTEEEEE--HHHHHHHHHHC---------
T ss_pred HHHHHHHhcCCCceEEEeecC---------CCCCCcHHHHHHHHHHhcccCCCeEEEECCHHHHHHHHHhc---------
Confidence 999988889999999999999 23456677777777721 1247999999999999999974
Q ss_pred CccCCCCccCCCce-eccccccc
Q 001061 476 GEIGSGQVEGFPSL-SGDFFTYA 497 (1167)
Q Consensus 476 ge~~~~~~~~~P~~-~GDffpYa 497 (1167)
..+|+. +|||||||
T Consensus 261 --------~~~p~~~~~df~~Y~ 275 (275)
T PF01074_consen 261 --------SELPVHYHGDFPPYA 275 (275)
T ss_dssp ----------B-EE-ES-B-S-E
T ss_pred --------cCCCcccCCCCCCCC
Confidence 268999 99999996
No 7
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). This domain is found at the C terminus of glycosyl hydrolases from family 38.; GO: 0015923 mannosidase activity, 0006013 mannose metabolic process; PDB: 2WYI_A 2WYH_A 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=4.3e-43 Score=422.50 Aligned_cols=421 Identities=30% Similarity=0.432 Sum_probs=284.3
Q ss_pred ceEEEEcCCCcceeEEEEEEEecCcEEEEeCCCeEEEEeeccccccCCcccccCcEEEEEEEecCCCeeEEEEEEcCccc
Q 001061 645 QSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVG 724 (1167)
Q Consensus 645 ~~vvvfNpL~~~R~~vV~v~V~~~~v~V~d~~G~~V~~Qi~p~~~~~~~~~~~~~~~L~F~a~vPpLG~~ty~I~~~~~~ 724 (1167)
+.|+|||||+|+|+++|+|+|..+.+.|.|..|++|++|++|. ......++|.|.++||||||++|.|......
T Consensus 1 ~~vvvfN~l~~~r~~vv~i~v~~~~~~~~~~~g~~v~~qi~~~------~~~~~~~~l~f~~~vPalGy~~~~i~~~~~~ 74 (457)
T PF07748_consen 1 FPVVVFNPLPWPRSEVVEIPVNTPNVSVYDADGKPVPSQIIPE------PYSTGRYELLFVVDVPALGYKTYRIVEGESS 74 (457)
T ss_dssp EEEEEEE-SSS-EEEEEEEEEEECEEEEECSTSHEEHCEEEEE------EEEEEEEEEEEEEEE-TTEEEEEEEEECSS-
T ss_pred CEEEEEECCCCcEEEEEEEEeccCceEEEecCCcEeeEEEEec------cCCCCceEEEEEeccCCceeEEEEeeccccc
Confidence 4699999999999999999999999999999999999999982 1235678999988999999999999986532
Q ss_pred cCCCCccceeccCCCCCCCCCCCccccCCCCceEEeeCeEEEEEEccCceEEEEE-ccCCcEEE--eeeeeeeeccC---
Q 001061 725 CDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKIS-HINGSQNV--VEEEIDMYSSQ--- 798 (1167)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IEN~~~~l~fd~~tGlL~si~-~k~g~~~~--v~~~f~~Y~s~--- 798 (1167)
..... .. .....++..|||++|+|+||+.+|.|.+|+ +++|+++. ..+++..|.+.
T Consensus 75 ~~~~~---~~---------------~~~~~~~~~leN~~~~v~~~~~tG~i~sl~dk~~g~~~~~~~~~~~~~y~~~~~~ 136 (457)
T PF07748_consen 75 EPSNE---AS---------------IAKDSGDNVLENEFYKVTFDPNTGGIKSLYDKKTGREYVDQDGNDFYIYEDIDGD 136 (457)
T ss_dssp -TTC-----C---------------EEETT-TTEEETSSEEEEE-TTTSSEEEEEETTTS-EEEEEECEEEEEEEBTTSC
T ss_pred ccccc---ce---------------eecceeeEEEEccEEEEEEeCCCCeEEEEEEccCCeEEEeecCCceeEecccccc
Confidence 11000 00 000113478999999999999779999997 56888888 88888888541
Q ss_pred ---------CCCceeeccCCCCcccccCCcEEEEEeCCceEEEEEeecc-------------cccCccEEEEEEEeeCCC
Q 001061 799 ---------GSGAYLFMPNGDAHPITEAGGLMVISKGPLMEEAYSYPRT-------------AWERSPISHSTRLYNGNN 856 (1167)
Q Consensus 799 ---------~SGAYiF~P~g~~~~~~~~~~~~~v~~Gpl~sev~~~~~~-------------~~~~s~i~~~vrLy~~~~ 856 (1167)
.+|+|+|.| +||+...+.+.... ....+.++++++||++.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~-----------------~g~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~i~~~i~L~~~~~ 199 (457)
T PF07748_consen 137 YDISPLELQRSGAYLFVE-----------------DGPLRSSIRVEYKFELPKNLSLVKRSEQTGSSRITQTIRLYKGSP 199 (457)
T ss_dssp TTE-SCCCGSEECCEEEE-----------------ESSSEEEEEEEEEEEEESCBECEEEESCEEEEEEEEEEEEETTES
T ss_pred ccccccccccCceEEEEe-----------------cCCceEEEEEEEEEeccCCcEEEEEEEeccceEEEEEEEEecCce
Confidence 234555544 44544444332210 012357999999999987
Q ss_pred ccceeEEEEEEEeeeccCCCCC-cEEEEEEEeecCCCceEEEccCCccccccCccCCCCCCcceEeccceEEEecCCCCe
Q 001061 857 MIQEFLIEKEYHVELLSHNFND-RELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIPLQGNYYPMPALAFMQGSNGQR 935 (1167)
Q Consensus 857 ~~~~~~iEi~~~Vd~~~~~~~n-~El~~rf~T~I~s~~~fYTD~NG~q~ikR~~~~~~pv~~NyYP~~s~a~I~D~~~~r 935 (1167)
.||+++.||.... .. ++|+++|+|+|.++..||+|.+|+++.+|++..+.|+++|||||++.+||.|++ .+
T Consensus 200 -----~ie~~~~vdn~~~--~~~~~l~~~f~t~i~~~~~~~~~~fG~~~r~~~~~~~~~~~~~~~p~~~~~~v~~~~-~~ 271 (457)
T PF07748_consen 200 -----RIEFETEVDNWAE--DHRKELRVRFPTNIDSDEAFYDDQFGFIERKRPTHPNTPWEANYYPVPSHAFVDDSD-SR 271 (457)
T ss_dssp -----SEEEEEEEEE-TT--SCEEEEEEEEEES-S-TCEEEEESTTEEEEECESSTTTTCGGG-EEECSCCEEEECS-EC
T ss_pred -----EEEEEEEeccccc--CCceeEEEEeecCCCCCCEEEECCCCeEEecCCccccCCcccccCCCcceEEEEcCC-CC
Confidence 6999999993221 23 379999999999999999999998887778888899999999999999999985 56
Q ss_pred eEEeecCCcceeecc-CCeEEEEEccccccCCCCCCCcCccCCcceeEEEEEEEecccccCccCCCCCcccCcchhhhhc
Q 001061 936 FSVHSRQSLGVASLK-DGWLEIMLDRRLSRDDGRGLGQGVLDNRAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLT 1014 (1167)
Q Consensus 936 ltvltdrs~G~sSl~-~G~lElmL~RRl~~DD~rGlge~l~Dn~~~~~~f~llle~~~~~~~~~~~~~~~~~psl~sh~~ 1014 (1167)
|+|+||+++|++++. +|+||||||||+.+||++|++ .|+|+++......... ...
T Consensus 272 l~i~~d~~~g~~~~~~~g~l~ltL~R~~~~D~g~~~~-----------~~~l~~~~~~~~~~~~-------------~~~ 327 (457)
T PF07748_consen 272 LAILNDGKYGYESLDQDGELELTLLRRPSQDDGRGVF-----------RYALYPHSGSWDEADV-------------VQE 327 (457)
T ss_dssp EEEEESS-EEEEECTTTTEEEEEEEEEBSCG-SSSEE-----------CCEEEEEEEEEEEEEC-------------HHC
T ss_pred EEEEcCCCcceEeccCCCeEEEEEeecccccCCccEE-----------EEEEEEeccccccccc-------------hhh
Confidence 999999999999998 999999999999999999998 5666665543210000 012
Q ss_pred cccccccceeeeccCCCCCcCCCCCCCcCCCC---CCCCCceeEEee--ecCCCCCCCCCCCCccceeEEEEeeccCccc
Q 001061 1015 GAHLNYPLHAFISKKPQELSVQPPPRSFSPLA---GSLPCDLHIVNF--KVPRPSKYSQQSPDDSRFVLILQRRYWDSSY 1089 (1167)
Q Consensus 1015 ~~~l~~P~~~~~~~~~~~~~~~~~~~~fs~l~---~~LP~dvHLltL--r~~~~~~~~~~~~~~~r~~liL~r~~~d~~~ 1089 (1167)
...+++|+..|..... .......++++. ..+||++|+.+| .++.+..... ...-++|||+.+..|.-
T Consensus 328 a~~l~~Pl~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sa~K~aed~~----~~~~~~ilR~~n~~~~~ 399 (457)
T PF07748_consen 328 AYELNQPLIVFNSSNI----QARQLNSFSGLSLPPEESPLNIHLLNLVVSALKKAEDGS----DWSDGLILRLYNPSGKE 399 (457)
T ss_dssp HHHHTS-EEEESS--T----TBEE--CE-TCS--SSEESTCECEEEEEEEEEEECTTTS----EEETCEEEEEEESSSST
T ss_pred hhhccCccEEeecccc----ccccccCCCcccccccccccccCCCcccccccccccccc----cccCCEEEEEEecCCCc
Confidence 2378999998722111 011123445444 248999999998 2332211100 00135799987776553
Q ss_pred ccCCC-CccccccccccchhhhcccCccceEEEccccCccccccccCCCCcccCCCCCCceEeccceeeEEE
Q 001061 1090 CRKGR-SQCVSVVDEPLNLFSMFKGLAILNAKATSLNLLNDDIGMLGYPEQLEDVSQDGQVTIAPMEIQAYK 1160 (1167)
Q Consensus 1090 ~~~~~-~~c~~~~~~~v~l~~LF~~~~v~~~~etsLt~~~~~~~~~~~~~~~~~~~~~~~v~L~PMEIrTf~ 1160 (1167)
..... ..|.......+.+.+||....+.+++|||+..... .+...|+|+||||+||+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~lle~~~~~~i~e~s~~~~~~--------------~~~~~~~l~P~EIkT~r 457 (457)
T PF07748_consen 400 TEASLDFLSKPLSGAEVNLVNLLEEPDIEEIEETSLSDPSE--------------SNSVELTLKPFEIKTFR 457 (457)
T ss_dssp CCCTTCCTSCCTEEEEEEEESTTSSSCEEEEEEE-SEEEES--------------CGGTCSEE-TTEEEEEE
T ss_pred cccccccCCccceeEEEEecccccCCCccceEeeccCCCCC--------------CCEeEEEEeCcEEEEEC
Confidence 22221 11211112457778999988889999999432111 12357899999999996
No 8
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-42 Score=431.07 Aligned_cols=591 Identities=19% Similarity=0.244 Sum_probs=439.8
Q ss_pred CCCCcceEEEEeeccccCccccccHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEechHHHHHHHHhcCHHHHHHHHHHHH
Q 001061 151 EWDHEKLKIFVVPHSHNDPGWKLTVDEYYDRQSRHILDTIVETLSKDARRKFIWEEMSYLERWWRDSSESQRASFTNLVK 230 (1167)
Q Consensus 151 ~~~~~~l~V~vVpHSH~D~GWl~T~deyy~~~v~~Ild~vv~~L~~dp~~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~ 230 (1167)
.|.....+|+.+.|+|.|..|+|.+++..+..++. ..+++..|...|..+|+.+. ...+.|.+...|+..++ ++|+
T Consensus 192 ~~y~~g~~I~~~ghahid~aWlw~l~et~r~a~ts-~~~~~~l~D~~p~~~~~~s~-~~~y~~l~~d~p~l~~~--~~v~ 267 (943)
T COG0383 192 NGYSNGNEIPAVGHAHIDTAWLWPLDETERKASTS-FSLVMNLMDHYPVQKFVQSA-AALYNWLKPDVPFLFSR--PAVE 267 (943)
T ss_pred HHhhccccccccchhhHHHHHhccHHHHHHHHhhh-hhheecccccChhhhhhhhH-HHHHHHhcCccHHHhhc--cccc
Confidence 34444555999999999999999999998888866 88999999999999999886 55778999999999999 9999
Q ss_pred CCcEEEecceeccccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCchhHHHHHHHcCCceeEeeccchhhH
Q 001061 231 NGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELK 310 (1167)
Q Consensus 231 ~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~vi~Ri~~~~K 310 (1167)
.|++++++|+||.+|.+.+++|+++||+..|++|+.+.||...|+.|.+|.||.|+++|+||..+|++.++.+++.|++.
T Consensus 268 ~~~~~~~~g~~ve~d~n~~sGEslsrq~~~gq~~~~~~f~~ssri~w~pd~fg~s~~Lpqil~p~gi~~f~t~klawn~t 347 (943)
T COG0383 268 FEQWEIVGGMWVEEDLNTPSGESLSRQFLYGQRFFTEKFGASSRIYWKPDSFGFSGQLPQILEPLGIDVFVTTKLAWNDT 347 (943)
T ss_pred ccceEEeecccccccCCccccchhhhhhhccceeeecccCccceeEeehhccccchhHHHHHHhhcchhhhccccchhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhcCCcceEEEEecCCCCCCCceEEEecCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCCHhHHHH
Q 001061 311 KELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQE 390 (1167)
Q Consensus 311 ~~~~~~k~~eF~Wr~s~~~~~gs~I~th~~p~y~Y~~p~tcgp~p~ic~~fDf~r~~g~~~~~cpw~~~p~~i~~~Nv~~ 390 (1167)
+.++ +-.|.|+ +.+|+++++|+.+. | | ..| ..+
T Consensus 348 n~~P---h~~~~w~----~~dg~e~~~hds~~---------~-----~-~~d----------------------~v~--- 380 (943)
T COG0383 348 NRFP---HDLLRWR----WKDGTENLAHDSIC---------G-----C-SSD----------------------PVH--- 380 (943)
T ss_pred cCCC---hhHheee----cccccccceeecCC---------C-----C-ccc----------------------HHH---
Confidence 8775 4678888 58999999998751 1 1 011 111
Q ss_pred HHHHHHHHHHhhcccccCCeEEEEecCCCCCCchhHHHHHHHhHHHHHHHHhcCCCCCceEEECCHHHHHHHHHHHhhcc
Q 001061 391 RALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRI 470 (1167)
Q Consensus 391 ra~~ll~~~~k~s~~y~tn~lL~p~GdDf~y~~~~~a~~~f~n~~kli~~iN~~~~~~~~i~~sTl~dYf~al~~~~~~~ 470 (1167)
.. .++|.+. .+..-..+...||..+.++.++++. .. ...+..+|.....+...
T Consensus 381 --~~--~~~r~~~-~~~~~~~~~g~gd~ggg~~~dm~~~----~~-----------------~~~~~~~~~~~~~~~~~- 433 (943)
T COG0383 381 --RE--MEYRFEK-INQVGLYLYGYGDGGGGPSIDMLEN----PE-----------------LPIAEGVFNTGVEKKTS- 433 (943)
T ss_pred --HH--HHhhhhh-hccceeEEeeccCCCCCCCHHHHhc----cc-----------------cccccceeeecceeeee-
Confidence 11 2233222 1233446667888888888666541 11 22233344333221110
Q ss_pred cCCCCCccCCCCccCCCceecccccccccCCccceeeeecchhhhhhhHHHHHHHHHHHHHHHHHHhhccccccccCChh
Q 001061 471 NYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMS 550 (1167)
Q Consensus 471 ~~~~~ge~~~~~~~~~P~~~GDffpYad~~~~yWtGyyTSRp~~K~~~R~~e~~Lr~aE~L~sla~~~~~~~~~~~~~~~ 550 (1167)
.....|++.|++|. +++.|.|||....|.++|..|..|+.+|.+.+++.... .....||
T Consensus 434 -----------~~~~~~~~~~ely~------E~hrg~~t~~~~~k~~~r~~e~~l~d~e~~~~~~~~~~--~~~~~~~-- 492 (943)
T COG0383 434 -----------TLELVPTWDGELYL------ELHRGTYTTQAKTKKLNRESEFLLEDAEGISVEAAIIE--GDRVTYP-- 492 (943)
T ss_pred -----------ecccccccchhhhh------hccCceeehhhhhhhhccccccceecccccchhhhhhc--cccccCc--
Confidence 12458999998886 88999999999999999999999999999999864321 1124566
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCCChhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCccccccccccccC
Q 001061 551 FAYKLTAARRNLALFQHHDGVTGTAKDHVVL-DYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYD 629 (1167)
Q Consensus 551 ~~~~L~~a~r~l~l~QHHDaItGTsk~~V~~-Dy~~rL~~a~~~~~~vi~~al~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 629 (1167)
...+.++|+.+.++|+||.++|++...|+. |....+...+..+..++..++..|.+
T Consensus 493 -~~~~~~~w~~~l~~qfhdvlpgs~i~~vy~~~a~~~~~~~~~~~~~i~~~~~~~l~~---------------------- 549 (943)
T COG0383 493 -YELLNELWKGLLLAQFHDVLPGSSIKEVYSYDALPLLEVVQKGASKIAELALKVLSS---------------------- 549 (943)
T ss_pred -hhhHHHHHHHhhhhhceeeccccceeeechhhHHHHHHhhhccchhhhhhhhhhhhh----------------------
Confidence 578999999999999999999999999999 88888888888888888877766521
Q ss_pred CCCcceeeeccCCCcceEEEEcCCCcceeEEEEEEEecCcEEEEeCCCeEEEEeeccccccCCcccccCcEEEEEEEecC
Q 001061 630 AQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIP 709 (1167)
Q Consensus 630 ~~~~~~~i~~~~~~~~~vvvfNpL~~~R~~vV~v~V~~~~v~V~d~~G~~V~~Qi~p~~~~~~~~~~~~~~~L~F~a~vP 709 (1167)
.....+.++|++.|.+. .++|+|..+..++.+... ...++|
T Consensus 550 ------------~~~e~~~~~~~~~~~~~----------~~~v~d~~~~~~~~~~~~-----------------~~ed~~ 590 (943)
T COG0383 550 ------------QCLENLFVKNTLSWNGI----------SLQVLDKTSGGIYTSQLT-----------------ALEDVG 590 (943)
T ss_pred ------------ccccceEEEeeccCCcc----------eEEEEEcCCCceehhhhh-----------------hhhhcC
Confidence 12245789999999881 566777666655543221 113789
Q ss_pred CCeeEEEEEEcCccccCCCCccceeccCCCCCCCCCCCccccCCCCceEEeeCeEEEEEEccCc-eEEEEEccCCcEEEe
Q 001061 710 ALGLQVYYIANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHG-LLQKISHINGSQNVV 788 (1167)
Q Consensus 710 pLG~~ty~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IEN~~~~l~fd~~tG-lL~si~~k~g~~~~v 788 (1167)
++|...+++++... .+ .....++...++.++ ++| .+..+.++
T Consensus 591 ~~g~~~i~~~~~~~-----~~------------------------~~~~~~~~~~~~~~~-~~gn~~~~~~~~------- 633 (943)
T COG0383 591 DIGNEYIYSQPTKT-----EP------------------------ETVIEEKEWKRLIIN-DTGNQLALIEDE------- 633 (943)
T ss_pred CcccceeEeccccc-----cc------------------------cccccccchheeecc-CCCcceeeeecc-------
Confidence 99999888733211 01 011223333344444 355 33322211
Q ss_pred eeeeeeeccCCCCceeeccCCCCc--ccccCCcEEEEEeCCceEEEEEeecccccCccEEEEEEEeeCCCccceeEEEEE
Q 001061 789 EEEIDMYSSQGSGAYLFMPNGDAH--PITEAGGLMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKE 866 (1167)
Q Consensus 789 ~~~f~~Y~s~~SGAYiF~P~g~~~--~~~~~~~~~~v~~Gpl~sev~~~~~~~~~~s~i~~~vrLy~~~~~~~~~~iEi~ 866 (1167)
-.+ ..||.-.+.-..+ .+.... ...++.|||+.+++...+ ...+.+.+.|++|++++ .|+|+
T Consensus 634 ---~~~-----~~~w~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~i~~~i~l~~~s~-----~l~~~ 697 (943)
T COG0383 634 ---PAY-----WDAWNIDKFLEEELLALTALP-EEAIENGPLVRTVRVSKE--LTESTITQKVTLYKGSP-----RLDFK 697 (943)
T ss_pred ---cce-----echhcchhhhhhhhhhhhccc-cchhccccceeeeeeeee--ccceEEEEEEEEecCCc-----eeEEE
Confidence 111 1233322221111 122222 557889999999987643 34678999999999998 69999
Q ss_pred EEeeeccCCCCCcEEEEEEEeecCCCceEEEccCCccccccCccCCCC--CCcceEeccceEEEecCCCCe--eEEeecC
Q 001061 867 YHVELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIP--LQGNYYPMPALAFMQGSNGQR--FSVHSRQ 942 (1167)
Q Consensus 867 ~~Vd~~~~~~~n~El~~rf~T~I~s~~~fYTD~NG~q~ikR~~~~~~p--v~~NyYP~~s~a~I~D~~~~r--ltvltdr 942 (1167)
..||+. ..++.+++-|+++++++ .+..| -.|+.++|+++.... .+.+--|+..++.+.|.. .+ +++++|+
T Consensus 698 t~vd~q---~~~~~lrv~fp~~~~s~-~a~~d-~~fg~v~Rp~~~~~~W~~a~~e~p~~~~vdls~~~-~g~~vs~ln~~ 771 (943)
T COG0383 698 TEVDNQ---VRDHRLRVLFPTDIASD-FATAD-IPFGVVERPTHPNTSWENARFEVPLQKFVDLSDGE-YGVTVSLLGDC 771 (943)
T ss_pred EEEEcc---ccceEEEEEeccccccc-ceecc-ccceeeccCCCCchhhhcccCcchhhccccccCCc-cceeEeccCCc
Confidence 999963 47899999999999997 34556 899999999987655 456666777888888875 55 8999999
Q ss_pred CcceeeccCCeEEEEEcccc
Q 001061 943 SLGVASLKDGWLEIMLDRRL 962 (1167)
Q Consensus 943 s~G~sSl~~G~lElmL~RRl 962 (1167)
.+|++. +++.|.|.|.|..
T Consensus 772 kYg~~~-~~~~l~lTLLrs~ 790 (943)
T COG0383 772 KYGIST-HGNLLALTLLRSV 790 (943)
T ss_pred ceeEec-cCCEEEEEecccc
Confidence 999885 9999999999887
No 9
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0008270 zinc ion binding; PDB: 1O7D_C 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A 3BUQ_A ....
Probab=99.83 E-value=3.5e-21 Score=175.51 Aligned_cols=80 Identities=41% Similarity=0.603 Sum_probs=67.4
Q ss_pred ccceeeeecchhhhhhhHHHHHHHHHHHHHHHHHHhhccccccccCChhHHHHHHHHHHHhhhhcccCCCCCCChhhHHH
Q 001061 502 DYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVL 581 (1167)
Q Consensus 502 ~yWtGyyTSRp~~K~~~R~~e~~Lr~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~a~r~l~l~QHHDaItGTsk~~V~~ 581 (1167)
+||+|||||||.+|+++|.+|++|++||+|++++.... .+..|| ...|+++|+.|+++||||+||||++++|++
T Consensus 1 e~~~G~~tSr~~~K~~~r~~e~~L~~~E~l~~~~~~~~---~~~~~~---~~~l~~~w~~l~~~q~HD~i~GT~~~~V~~ 74 (80)
T PF09261_consen 1 EYWTGYYTSRPDIKQLNRRAENLLRAAEPLAALAALLG---NGGDYP---QEELEKAWKALLLNQFHDAITGTSIDSVYD 74 (80)
T ss_dssp EES-GGGCSTHHHHHHHHHHHHHHHCHHHHHHHCHHH-----HSG-H---HHHHHHHHHHHHCTTBTTTTTS-S-HHHHH
T ss_pred CCcceeeeCHHHHHHHHHHHHHHHHHHHHHHHHHhHhc---cCcccc---HHHHHHHHHHHHHhccCCCCCCcChHHHHH
Confidence 58999999999999999999999999999999986541 112455 578999999999999999999999999999
Q ss_pred HHHHHH
Q 001061 582 DYGTRM 587 (1167)
Q Consensus 582 Dy~~rL 587 (1167)
||.+||
T Consensus 75 d~~~rl 80 (80)
T PF09261_consen 75 DYLRRL 80 (80)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 999886
No 10
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain. Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase PUBMED:12634058.
Probab=99.79 E-value=2.3e-19 Score=163.17 Aligned_cols=79 Identities=42% Similarity=0.571 Sum_probs=70.2
Q ss_pred cceeeeecchhhhhhhHHHHHHHHHHHHHHHHHHhhccccccccCChhHHHHHHHHHHHhhhhcccCCCCCCChhhHHHH
Q 001061 503 YWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLD 582 (1167)
Q Consensus 503 yWtGyyTSRp~~K~~~R~~e~~Lr~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~a~r~l~l~QHHDaItGTsk~~V~~D 582 (1167)
||+|||||||.+|+++|.+|++|+.+|.+++++.... .+..|| .+.|+.+|+.|+++||||+||||++++|++|
T Consensus 1 ~h~G~~Tsr~~~K~~~r~~E~~L~~~e~~~~~~~~~~---~~~~~~---~~~l~~~wk~ll~~q~HD~i~Gt~~~~V~~d 74 (79)
T smart00872 1 YHRGTYTSRPYLKRLNRRLESLLRAAEELAALAALLL---LGYKYP---SEQLEELWKALLLNQFHDAITGTSIDEVYDD 74 (79)
T ss_pred CCCceecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCCc---HHHHHHHHHHHHHhcCcccCCccCcHHHHHH
Confidence 7999999999999999999999999999999975431 134566 4689999999999999999999999999999
Q ss_pred HHHHH
Q 001061 583 YGTRM 587 (1167)
Q Consensus 583 y~~rL 587 (1167)
|.+|+
T Consensus 75 ~~~r~ 79 (79)
T smart00872 75 YETRL 79 (79)
T ss_pred HHHhC
Confidence 98874
No 11
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=99.65 E-value=5.5e-18 Score=215.51 Aligned_cols=358 Identities=18% Similarity=0.173 Sum_probs=257.5
Q ss_pred ceEEEEeeccccCccccccHHHHHHHHHHHHHHHHHHHHhcCCC-CcEEEe-chHHHHHHHHhcCHHHHHHHHHHHHCCc
Q 001061 156 KLKIFVVPHSHNDPGWKLTVDEYYDRQSRHILDTIVETLSKDAR-RKFIWE-EMSYLERWWRDSSESQRASFTNLVKNGQ 233 (1167)
Q Consensus 156 ~l~V~vVpHSH~D~GWl~T~deyy~~~v~~Ild~vv~~L~~dp~-~kFi~~-Eis~f~~Ww~~~~p~~k~~vk~LV~~Gq 233 (1167)
+..+|+++|+|||.+|+.+.+.+....++. ++++++.++++|. .-|.-+ +++.|+++. ...|+.+++++.+++.|+
T Consensus 3 ~~~~~ii~~~~wdrew~~~~e~~~~~~~~~-~~~i~~~~~~~~~~~~~~~d~qt~~l~d~l-~v~~~~~~~~~~~~~~~~ 80 (943)
T COG0383 3 KKKVHIISHSHWDREWYFTSESHRILLDEL-FEEIIELLQKDPEFAGFHLDGQTIWLDDYL-AVPPELKDRVKLLIASGK 80 (943)
T ss_pred ccccccchhhhhhhhceeeccceEeechhh-hhhhhhccccCcccceecCccceeeeeeeE-EecccchhhHHHHHhhcC
Confidence 566799999999999999999998777765 8999999999994 336666 777788887 688999999999999999
Q ss_pred EEEecceeccccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCchhHHHHHHHcCCceeEeeccchhhH--H
Q 001061 234 LEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELK--K 311 (1167)
Q Consensus 234 LEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~vi~Ri~~~~K--~ 311 (1167)
+.+ |.++.+.|.+.++.|+.+++++.|..... .+|...+.||-+|.||+..++|+++..+||+...|+|+--... +
T Consensus 81 l~i-g~~~~~~~~~~~~~e~~~rn~l~~~~~~~-~~~~~~~~g~~~d~~g~~~qa~~~~~~~~i~~~~f~r~~~~~~~~~ 158 (943)
T COG0383 81 LGI-GPWYTQTDTFILSGESNVRNLLIGEFDAE-RFGKAMKLGYFPDTFGNLGQAPQLYENAGISAVAFGRGAALIGFGQ 158 (943)
T ss_pred ccc-cCCCCeeEEEEeccccceeeeecchHHHH-HhhhhhccccccccchhhhhhhHHHHhcCCchhhcccccchhhccc
Confidence 996 99999999999999999999999999986 5668899999999999999999999999999999999853211 0
Q ss_pred H-------HhcCCcceEEEEecCCCCCCCceEEEecCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCC
Q 001061 312 E-------LALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETN 384 (1167)
Q Consensus 312 ~-------~~~~k~~eF~Wr~s~~~~~gs~I~th~~p~y~Y~~p~tcgp~p~ic~~fDf~r~~g~~~~~cpw~~~p~~i~ 384 (1167)
. -....-.|..|. .+++++++-+.++. .|..+. ..+. +.
T Consensus 159 ~~~~~~~~~~~~~~~ei~~~----~~~~~~~l~il~~~-~y~~g~---------------------------~I~~--~g 204 (943)
T COG0383 159 LVLFELLEAYGSDFSEITWS----EPDGSQVLGILLAN-GYSNGN---------------------------EIPA--VG 204 (943)
T ss_pred chhhhhhhHhcCcCcccccc----cCCchhhHHHHHHH-Hhhccc---------------------------cccc--cc
Confidence 0 011122344554 46667766666664 443211 1100 11
Q ss_pred HhHHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCchhHHHHHHHhHHHHHHHHhcCCCCCceEEECC----HHHHH
Q 001061 385 QENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGT----LDDYF 460 (1167)
Q Consensus 385 ~~Nv~~ra~~ll~~~~k~s~~y~tn~lL~p~GdDf~y~~~~~a~~~f~n~~kli~~iN~~~~~~~~i~~sT----l~dYf 460 (1167)
..-++-....-++..++++ .+..++++.|.|..+. +.+...-+.+.|.-.. .+...|+- ...||
T Consensus 205 hahid~aWlw~l~et~r~a---~ts~~~~~~l~D~~p~--------~~~~~s~~~~y~~l~~-d~p~l~~~~~v~~~~~~ 272 (943)
T COG0383 205 HAHIDTAWLWPLDETERKA---STSFSLVMNLMDHYPV--------QKFVQSAAALYNWLKP-DVPFLFSRPAVEFEQWE 272 (943)
T ss_pred hhhHHHHHhccHHHHHHHH---hhhhhheecccccChh--------hhhhhhHHHHHHHhcC-ccHHHhhcccccccceE
Confidence 1223334455567777777 4677789999998764 2556666666664322 11112222 22233
Q ss_pred HHHHHHhhcccCCCCCccCCCCccCCCceecccccccccCCcc------ceeeeecchhhhhhhHHHHHHH-HHHHHHHH
Q 001061 461 RTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDY------WSGYYVSRPFFKAVDRVLEQTL-RATEMMVA 533 (1167)
Q Consensus 461 ~al~~~~~~~~~~~~ge~~~~~~~~~P~~~GDffpYad~~~~y------WtGyyTSRp~~K~~~R~~e~~L-r~aE~L~s 533 (1167)
......+ ....++.+|++. .+...| ....-+||.++|..+-..+..| +.+|++..
T Consensus 273 ~~~g~~v---------------e~d~n~~sGEsl---srq~~~gq~~~~~~f~~ssri~w~pd~fg~s~~Lpqil~p~gi 334 (943)
T COG0383 273 IVGGMWV---------------EEDLNTPSGESL---SRQFLYGQRFFTEKFGASSRIYWKPDSFGFSGQLPQILEPLGI 334 (943)
T ss_pred Eeecccc---------------cccCCccccchh---hhhhhccceeeecccCccceeEeehhccccchhHHHHHHhhcc
Confidence 3222211 134678888875 122223 2345579999999888888777 45777775
Q ss_pred -------HHHhhccccccccCChhHHHHHHHHHHHhhhhcccCCCCCCChhhHHHHHHHHHHH
Q 001061 534 -------LLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHT 589 (1167)
Q Consensus 534 -------la~~~~~~~~~~~~~~~~~~~L~~a~r~l~l~QHHDaItGTsk~~V~~Dy~~rL~~ 589 (1167)
+|.. ....|| ++.+.-+|+.+...+-||.++||+.|.|+.+...|...
T Consensus 335 ~~f~t~klawn-----~tn~~P---h~~~~w~~~dg~e~~~hds~~~~~~d~v~~~~~~r~~~ 389 (943)
T COG0383 335 DVFVTTKLAWN-----DTNRFP---HDLLRWRWKDGTENLAHDSICGCSSDPVHREMEYRFEK 389 (943)
T ss_pred hhhhccccchh-----hccCCC---hhHheeecccccccceeecCCCCcccHHHHHHHhhhhh
Confidence 4433 346678 57899999999999999999999999999988887766
No 12
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 57 GH57 from CAZY comprises enzymes with two known activities; alpha-amylase (3.2.1.1 from EC) and 4-alpha-glucanotransferase (2.4.1 from EC).; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1K1X_B 1K1W_A 1K1Y_A 3N98_A 3N8T_A 3N92_A 1UFA_A 3P0B_A.
Probab=98.21 E-value=7.3e-06 Score=96.38 Aligned_cols=143 Identities=16% Similarity=0.212 Sum_probs=100.3
Q ss_pred EeeccccC----cc-ccccHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEechHHHHHHHHhcCHHH--------------
Q 001061 161 VVPHSHND----PG-WKLTVDEYYDRQSRHILDTIVETLSKDARRKFIWEEMSYLERWWRDSSESQ-------------- 221 (1167)
Q Consensus 161 vVpHSH~D----~G-Wl~T~deyy~~~v~~Ild~vv~~L~~dp~~kFi~~Eis~f~~Ww~~~~p~~-------------- 221 (1167)
+|=|.|.= ++ |....+..|...++. .--++..|.+.|+.|++.+=+..|-.||++..++.
T Consensus 2 fv~H~HqP~~~~~~~~~~~~~w~~~~~~~~-Y~pll~~l~~~~~~k~t~~lSp~LleqL~d~~~~~~~~~l~~~~~~~e~ 80 (360)
T PF03065_consen 2 FVLHAHQPYYRHPESGPYEEPWVFLHATEC-YLPLLRLLERLPDFKLTFSLSPSLLEQLEDYAPQEYDQYLERSLARAEL 80 (360)
T ss_dssp EEEEE---T-TTSHSCCCSHHHHHHHHHHT-HHHHHHHHHHHHH--EEEEE-HHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCcCCCCCcchhhhhHHHHHHhh-HHHHHHHHHhCcCccEEEEECHHHHHHHHhhhhhccccccccccccccc
Confidence 45577754 34 665555555444433 34666777777767777663355666777777777
Q ss_pred --------------------------------HHHHHHHHHCCcEEEecceeccccccCCCH-HHHHHHHHHHHHHHHHh
Q 001061 222 --------------------------------RASFTNLVKNGQLEIVGGGWVMNDEANSHY-FAIIEQIMEGNMWLNDT 268 (1167)
Q Consensus 222 --------------------------------k~~vk~LV~~GqLEivgGgwvm~DEa~~~~-esiI~Ql~~Gh~~l~~~ 268 (1167)
-+.+|+|+++|++|++|++|..+=-.+..- +++..|+..|.+.+++.
T Consensus 81 ~~~~~~~~~~~~f~~~~~~~~l~~~~~~~~~ii~~~~~l~~~G~iEll~~~~~h~ilpl~~~~~d~~~Qi~~~~~~~~~~ 160 (360)
T PF03065_consen 81 LREEKEFLLRANFTREDFERLLDFFREIIGDIIEAFRELAERGQIELLTSPYYHPILPLLPDPEDFRAQIEMGREYFKKH 160 (360)
T ss_dssp HHHTTSTCHHHHHHHHHHHHHHHHHHHTTT-HHHHHHHHHHTTSEEEEEE-TT-B-GGGSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccchhhhhHHHHHHHHHCCCEEEEeCchHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999887777777 99999999999999999
Q ss_pred cCCCCCcceecCCCCCchhHHHHHHHcCCceeEeecc
Q 001061 269 IGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRT 305 (1167)
Q Consensus 269 fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~vi~Ri 305 (1167)
||++|+..|.+. .+.++.+..+|+++||+++++.--
T Consensus 161 FG~~P~G~W~pE-~a~~~~l~~~l~~~Gi~~~i~d~~ 196 (360)
T PF03065_consen 161 FGRRPRGFWLPE-CAYSPGLEEILAEAGIRYTILDGH 196 (360)
T ss_dssp HSS--SBEE-GG-G-B-TTHHHHHHHTT--EEEEECH
T ss_pred hCCCCCceECcc-cccCHHHHHHHHHcCCEEEEECcH
Confidence 999999999976 689999999999999999998643
No 13
>COG1543 Uncharacterized conserved protein [Function unknown]
Probab=96.31 E-value=0.013 Score=68.55 Aligned_cols=93 Identities=20% Similarity=0.368 Sum_probs=79.8
Q ss_pred HHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCC-HHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCchhH
Q 001061 210 LERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSH-YFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATM 288 (1167)
Q Consensus 210 f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~-~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~ 288 (1167)
...+|+..+.+.-++||++.++|.+||++.+.+-.---+-- -++|=-|+..|.+-.+++||..|+--|.+ -=++.+.+
T Consensus 114 ~~~~~e~~d~~ll~~f~~~~~~g~ieilts~athg~lPll~~peAi~AQi~~g~~~ye~~fg~~P~GiWlP-Ecay~pgi 192 (504)
T COG1543 114 ARGYWEQYDGNLLEAFKELQRSGGIEILTSAATHGYLPLLGGPEAIEAQILTGIELYEEHFGLAPKGIWLP-ECAYAPGI 192 (504)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCCceeeeehhhheehhhcCCchhhHHHHHHHHHHHHHHhCCCCCceech-hhccccch
Confidence 45688899999999999999999999998876633222222 27888899999999999999999999999 67999999
Q ss_pred HHHHHHcCCceeEee
Q 001061 289 AYLLRRMGFENMLIQ 303 (1167)
Q Consensus 289 p~Ll~~~G~~~~vi~ 303 (1167)
..+|+.+||++++.-
T Consensus 193 e~~l~~~Gi~yf~vd 207 (504)
T COG1543 193 ERILKDAGIEYFFVD 207 (504)
T ss_pred HHHHHhcCceEEEec
Confidence 999999999999975
No 14
>TIGR03212 uraD_N-term-dom putative urate catabolism protein. This model represents a protein that is predominantly found just upstream of the UraD protein (OHCU decarboxylase) and in a number of instances as a N-terminal fusion with it. UraD itself catalyzes the last step in the catabolism of urate to allantoate. The function of this protein is presently unknown. It shows homology with the pfam01522 polysaccharide deacetylase domain family.
Probab=95.40 E-value=1.4 Score=50.65 Aligned_cols=106 Identities=14% Similarity=0.056 Sum_probs=80.7
Q ss_pred HHHHHHHHhcCCC-CcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHH
Q 001061 187 LDTIVETLSKDAR-RKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWL 265 (1167)
Q Consensus 187 ld~vv~~L~~dp~-~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l 265 (1167)
+-.+++.|+++-= -+|-..- |+-+.+| +.+|+++++| .||.+=||...+-..-+.+...++|..+.+-|
T Consensus 79 ~~RiLdlL~~~gv~aTffv~g------~~~e~~P---~~v~~i~~~G-HEIg~Hg~~H~~~~~ls~~~e~~~i~~s~~~i 148 (297)
T TIGR03212 79 FWRLLRLFTERGIPVTVFGVA------MALARNP---EAVAAMKEAG-WEIASHGLRWIDYQDMDEAQEREHIAEAIRLH 148 (297)
T ss_pred HHHHHHHHHHcCCCEEEEeEH------HHHHHCH---HHHHHHHHcC-CEEeeccccCcccccCCHHHHHHHHHHHHHHH
Confidence 6789999998743 3343331 2224444 4788888999 99999999987777777888999999999999
Q ss_pred HHhcCCCCCcceecCCCCCchhHHHHHHH-cCCceeEeecc
Q 001061 266 NDTIGFIPKNSWAIDPFGYSATMAYLLRR-MGFENMLIQRT 305 (1167)
Q Consensus 266 ~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~-~G~~~~vi~Ri 305 (1167)
++..|..| .||.- -.+|..++.||++ .||.+..-...
T Consensus 149 ~~~tG~~P-~G~~~--~~~s~~T~~LL~e~~Gf~Y~sd~~~ 186 (297)
T TIGR03212 149 TEVTGERP-LGWYT--GRTSPNTRRLVAEEGGFLYDADSYA 186 (297)
T ss_pred HHHhCCCC-ceEEC--CCCChhHHHHHHHhcCceEeCchhh
Confidence 98889876 56653 3689999999998 99988765443
No 15
>PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase. This family of polysaccharide deacetylases includes NodB (nodulation protein B from Rhizobium) which is a chitooligosaccharide deacetylase []. It also includes chitin deacetylase from yeast [], and endoxylanases which hydrolyses glucosidic bonds in xylan [].; GO: 0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, 0005975 carbohydrate metabolic process; PDB: 2IW0_A 2CC0_B 2VYO_A 2J13_A 2C71_A 2C79_A 1W1A_1 1W1B_1 1W17_A 1NY1_B ....
Probab=95.12 E-value=0.17 Score=49.43 Aligned_cols=102 Identities=24% Similarity=0.351 Sum_probs=74.8
Q ss_pred HHHHHHHHHhcCCC-CcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHH
Q 001061 186 ILDTIVETLSKDAR-RKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMW 264 (1167)
Q Consensus 186 Ild~vv~~L~~dp~-~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~ 264 (1167)
....+++.|+++.= ..|-..- .+..+. .+.+++++++| .||.+-||.-++-...+.+.+.+++..+.++
T Consensus 19 ~~~~~~~~l~~~~i~at~fv~~-~~~~~~--------~~~l~~l~~~G-~ei~~H~~~H~~~~~~~~~~~~~ei~~~~~~ 88 (123)
T PF01522_consen 19 NYDRLLPLLKKYGIPATFFVIG-SWVERY--------PDQLRELAAAG-HEIGNHGWSHPNLSTLSPEELRREIERSREI 88 (123)
T ss_dssp HHHHHHHHHHHTT--EEEEE-H-HHHHHH--------HHHHHHHHHTT--EEEEE-SSSSCGGGS-HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcccceeeeecc-cccccc--------cccchhHHHHH-HHHHhcCCcccccccCCHHHHHHHHHHHHHH
Confidence 36788888888742 2232221 234444 57899999999 9999999999998888999999999999999
Q ss_pred HHHhcCCCCCcceecCCCCC-chhHHHHHHHcCCce
Q 001061 265 LNDTIGFIPKNSWAIDPFGY-SATMAYLLRRMGFEN 299 (1167)
Q Consensus 265 l~~~fG~~p~~gW~iDpFGh-S~~~p~Ll~~~G~~~ 299 (1167)
|++.+|..|+ +|. =|||. +..+-.+++++||++
T Consensus 89 l~~~~g~~~~-~f~-~P~g~~~~~~~~~l~~~G~~y 122 (123)
T PF01522_consen 89 LEEITGRPPK-GFR-YPFGSYDDNTLQALREAGYKY 122 (123)
T ss_dssp HHHHHSSEES-EEE--GGGEECHHHHHHHHHTT-EE
T ss_pred HHHHhCCCCc-EEE-CCCCCCCHHHHHHHHHcCCCc
Confidence 9999999443 344 57876 667789999999986
No 16
>COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=89.03 E-value=5.4 Score=50.36 Aligned_cols=93 Identities=16% Similarity=0.303 Sum_probs=74.3
Q ss_pred cEEEec---hHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceecc------ccccCCCHHHHHHHHHHHHHHHHHhcCC
Q 001061 201 KFIWEE---MSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVM------NDEANSHYFAIIEQIMEGNMWLNDTIGF 271 (1167)
Q Consensus 201 kFi~~E---is~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm------~DEa~~~~esiI~Ql~~Gh~~l~~~fG~ 271 (1167)
-|.++. +-....|| .++.-+.+|++++.|+.|+++--|-- +|.. -++++++|+..+....++.||+
T Consensus 161 ~ys~~g~~~il~~~~~~---~~~vl~~~r~l~e~g~~e~~~~pyyHsl~pl~~d~g--w~~d~~~qv~~~~~~~~elfG~ 235 (615)
T COG1449 161 NYSLSGGETILEQQLDE---APRVLEAFRELAESGKVELTASPYYHSLIPLLADDG--WYEDFKEQVMMSRELYKELFGV 235 (615)
T ss_pred ceeccccHHHHHHHHHH---HhhhHHHHHHHHhcCceEEEecccccccchhcccCC--chHHHHHHHHHHHHHHHHHhCC
Confidence 377774 22234444 57788999999999999998877643 3332 4579999999999999999999
Q ss_pred CCCcceecCCCCCchhHHHHHHHcCCce
Q 001061 272 IPKNSWAIDPFGYSATMAYLLRRMGFEN 299 (1167)
Q Consensus 272 ~p~~gW~iDpFGhS~~~p~Ll~~~G~~~ 299 (1167)
.|+..|.+ -+=.+..+..+++.+||..
T Consensus 236 ~p~~~~~t-El~y~~~i~~~~~e~G~~~ 262 (615)
T COG1449 236 WPSGFWNT-ELAYNDQILEYFEESGFSW 262 (615)
T ss_pred CCccccCh-hhhccHHHHHHHHHcCCcc
Confidence 99999985 3667889999999999994
No 17
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=87.65 E-value=2.8 Score=44.67 Aligned_cols=100 Identities=18% Similarity=0.304 Sum_probs=74.4
Q ss_pred HHHHHHHhcCCCC-c-EEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHH
Q 001061 188 DTIVETLSKDARR-K-FIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWL 265 (1167)
Q Consensus 188 d~vv~~L~~dp~~-k-Fi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l 265 (1167)
..+++.|+++.-+ . |+-.+ |. +..| +.+++++++|. ||-+-+|.-++-...+.+.+.+++..+.+.|
T Consensus 22 ~~~l~~L~~~~ikaTfFv~g~------~~-~~~~---~~~~~i~~~Gh-eig~Ht~~H~~~~~~~~~~~~~ei~~~~~~l 90 (191)
T TIGR02764 22 EPILDTLKEYDVKATFFLSGS------WA-ERHP---ELVKEIVKDGH-EIGSHGYRHKNYTTLEDEKIKKDILRAQEII 90 (191)
T ss_pred HHHHHHHHHcCCCEEEEeccH------HH-HHCH---HHHHHHHhCCC-EEEECCcCCCCcccCCHHHHHHHHHHHHHHH
Confidence 4567778877432 3 44333 22 2233 67899999995 9999999988877788899999999999999
Q ss_pred HHhcCCCCCcceecCCCCC-chhHHHHHHHcCCcee
Q 001061 266 NDTIGFIPKNSWAIDPFGY-SATMAYLLRRMGFENM 300 (1167)
Q Consensus 266 ~~~fG~~p~~gW~iDpFGh-S~~~p~Ll~~~G~~~~ 300 (1167)
++..|..|+ |--=|+|. +..+..++++.||..+
T Consensus 91 ~~~~g~~~~--~fr~P~G~~~~~~~~~l~~~G~~~v 124 (191)
T TIGR02764 91 EKLTGKKPT--LFRPPSGAFNKAVLKAAESLGYTVV 124 (191)
T ss_pred HHHhCCCCC--EEECCCcCCCHHHHHHHHHcCCeEE
Confidence 999998775 34457774 5566788889998743
No 18
>TIGR03006 pepcterm_polyde polysaccharide deactylase family protein, PEP-CTERM locus subfamily. Members of this protein family belong to the family of polysaccharide deacetylases (pfam01522). All are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria, and are found near the epsH homolog that is the putative exosortase gene. The highest scoring homologs below the trusted cutoff for this model are found in several species of Methanosarcina, an archaeal genus.
Probab=85.81 E-value=5.1 Score=45.27 Aligned_cols=105 Identities=15% Similarity=0.150 Sum_probs=75.8
Q ss_pred HHHHHHHHHhcCCC-Cc-EEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHH
Q 001061 186 ILDTIVETLSKDAR-RK-FIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNM 263 (1167)
Q Consensus 186 Ild~vv~~L~~dp~-~k-Fi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~ 263 (1167)
-+..+++.|+++-= -+ |+-.. +.+..| +.+|+++++| .||.+=||...+-..-+-+.+.+++....+
T Consensus 29 nt~riL~lL~~~gikATFFv~g~-------~~e~~p---~lir~i~~~G-hEIgsHg~sH~~l~~ls~ee~~~eI~~s~~ 97 (265)
T TIGR03006 29 NTDRILDLLDRHGVKATFFTLGW-------VAERYP---ELVRRIVAAG-HELASHGYGHERVTTQTPEAFRADIRRSKA 97 (265)
T ss_pred hHHHHHHHHHHcCCcEEEEEecc-------chhhCH---HHHHHHHHcC-CEeeeccccCcCchhCCHHHHHHHHHHHHH
Confidence 36788999998743 33 44332 233444 5699999999 599999998777666678899999999999
Q ss_pred HHHHhcCCCCCcceecCC--CCC-chhHHHHHHHcCCceeEe
Q 001061 264 WLNDTIGFIPKNSWAIDP--FGY-SATMAYLLRRMGFENMLI 302 (1167)
Q Consensus 264 ~l~~~fG~~p~~gW~iDp--FGh-S~~~p~Ll~~~G~~~~vi 302 (1167)
.|++..|..|+ ||..=. +|. +.....+|+++||.+..-
T Consensus 98 ~Le~itG~~~~-gfRaP~~s~~~~t~~a~~iL~e~Gy~YdsS 138 (265)
T TIGR03006 98 LLEDLSGQPVR-GYRAPSFSIGKKNLWALDVLAEAGYRYSSS 138 (265)
T ss_pred HHHHHhCCCce-EEECCCCCCCCCcHHHHHHHHHCCCEEEEe
Confidence 99998898776 453222 233 234569999999987543
No 19
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=84.67 E-value=4 Score=44.91 Aligned_cols=100 Identities=11% Similarity=0.129 Sum_probs=75.7
Q ss_pred HHHHHHHhcCCC-Cc-EEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHH
Q 001061 188 DTIVETLSKDAR-RK-FIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWL 265 (1167)
Q Consensus 188 d~vv~~L~~dp~-~k-Fi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l 265 (1167)
..+++.|+++-= -. |+-.+ |. +.. .+.+|+++++| .||-+-+|.-++-...+.+.+.++|....+.|
T Consensus 53 ~~lL~~L~~~~vkATFFv~G~------~~-~~~---p~~ir~i~~~G-heIgnHt~~H~~~~~ls~~~~~~ei~~~~~~i 121 (224)
T TIGR02884 53 PKILDVLKEKKVPAAFFVTGH------YI-KTQ---PDLIKRMVDEG-HIVGNHSVHHPSLTAVNDEKFKEELTGVEEEF 121 (224)
T ss_pred HHHHHHHHHcCCCeEEEeech------hh-HHC---HHHHHHHHHcC-CEeeecCccCcCcccCCHHHHHHHHHHHHHHH
Confidence 457788888743 23 44333 33 233 36899999999 48888899988877778899999999999999
Q ss_pred HHhcCCCCCcceecCCCC-CchhHHHHHHHcCCce
Q 001061 266 NDTIGFIPKNSWAIDPFG-YSATMAYLLRRMGFEN 299 (1167)
Q Consensus 266 ~~~fG~~p~~gW~iDpFG-hS~~~p~Ll~~~G~~~ 299 (1167)
++..|..+ ..|--=|+| ++..+..+++++|+..
T Consensus 122 ~~~~G~~~-~~~fR~P~G~~~~~~~~~l~~~Gy~~ 155 (224)
T TIGR02884 122 KKVTGQKE-MKYFRPPRGVFSERTLAYTKELGYYT 155 (224)
T ss_pred HHHhCCCC-CCEEeCCCCCcCHHHHHHHHHcCCcE
Confidence 99888762 346667899 4778899999999874
No 20
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=80.60 E-value=4.5 Score=51.33 Aligned_cols=120 Identities=17% Similarity=0.252 Sum_probs=81.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCC-Cc-EEEechHHHHHHHHhcCHH---------------HHHHHHHHHHCCcEE
Q 001061 173 LTVDEYYDRQSRHILDTIVETLSKDAR-RK-FIWEEMSYLERWWRDSSES---------------QRASFTNLVKNGQLE 235 (1167)
Q Consensus 173 ~T~deyy~~~v~~Ild~vv~~L~~dp~-~k-Fi~~Eis~f~~Ww~~~~p~---------------~k~~vk~LV~~GqLE 235 (1167)
-|||+-|.. .+..++..|+++-- .. |+-. .|++..... ..+++|+++++|-+|
T Consensus 111 LTFDDGy~s----ny~~AlPILKkyg~pATfFvVg------~wid~~~~~~v~~~~~~~~r~~~LTW~qIrEM~~sGLvE 180 (672)
T PRK14581 111 LTFDDGYSS----FYRRVYPLLKAYKWSAVLAPVG------TWIDTATDKKVDFGGLSTDRDRFATWKQITEMSKSGLVE 180 (672)
T ss_pred EEEEcCCcc----hHHHHHHHHHHcCCCEEEEEec------hhhccCcccccccccccccccccCCHHHHHHHHHCCCcE
Confidence 367776653 25678888888732 12 3322 366332110 236899999999999
Q ss_pred Eecceeccccc--------------------cCCCHHH-------HHHHHHHHHHHHHHhcCCCCCcceecCCCCC-chh
Q 001061 236 IVGGGWVMNDE--------------------ANSHYFA-------IIEQIMEGNMWLNDTIGFIPKNSWAIDPFGY-SAT 287 (1167)
Q Consensus 236 ivgGgwvm~DE--------------------a~~~~es-------iI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGh-S~~ 287 (1167)
|-+=+|..+.- ....||+ +-+.+....+.|++..|..|+. -.=|||+ +..
T Consensus 181 IGSHT~sHh~~~~~np~g~~~pa~~~~~y~~~~~~yEs~~~~~~rl~~Di~~s~~~Ie~~lG~~p~~--FayPyG~yn~~ 258 (672)
T PRK14581 181 IGAHTYASHYGVIANPQGNTEPAAANLQYDPKTKQYETVEAFKQRMEKDVALITQRIVQATGKQPRV--WVWPYGAPNGT 258 (672)
T ss_pred EEcCCcccccccccCccccccchhhhccccccccccccHHHHHHHHHHHHHHHHHHHHHHhCCCCCE--EEcCCCCcCHH
Confidence 98888876631 2223443 5566788889999999988874 4468995 778
Q ss_pred HHHHHHHcCCceeEeec
Q 001061 288 MAYLLRRMGFENMLIQR 304 (1167)
Q Consensus 288 ~p~Ll~~~G~~~~vi~R 304 (1167)
.-.+++++||+..+..+
T Consensus 259 ~~~iak~aGy~~afTt~ 275 (672)
T PRK14581 259 VLNILRQHGYQLAMTLD 275 (672)
T ss_pred HHHHHHHCCCcEEEECC
Confidence 88999999999887654
No 21
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=79.78 E-value=8.7 Score=43.52 Aligned_cols=99 Identities=24% Similarity=0.365 Sum_probs=76.2
Q ss_pred HHHHHHHHhcCCC-Cc-EEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHH
Q 001061 187 LDTIVETLSKDAR-RK-FIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMW 264 (1167)
Q Consensus 187 ld~vv~~L~~dp~-~k-Fi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~ 264 (1167)
...+++.|+++-= .+ |+.. +|. +..| +.+|+++++|. ||-+=+|.-++-..-+.+.+.++|..+.+.
T Consensus 100 t~~iL~iLkk~~vkATFFv~G------~~i-~~~p---~l~k~i~~~Gh-eIGnHT~sH~~l~~ls~~~~~~Ei~~~~~~ 168 (268)
T TIGR02873 100 LPEILQILKKHDVKATFFLEG------KWV-KENS---QLAKMIVEQGH-EIGNHAYNHPDMATLSKEEIYDQINQTNEI 168 (268)
T ss_pred HHHHHHHHHHCCCCEEEEeeh------Hhh-hHCH---HHHHHHHHCCC-EEEecCCcCCCcccCCHHHHHHHHHHHHHH
Confidence 3577888888743 23 4433 243 2334 46889999995 898999998888888889999999999999
Q ss_pred HHHhcCCCCCcceecCCCCC-chhHHHHHHHcCCc
Q 001061 265 LNDTIGFIPKNSWAIDPFGY-SATMAYLLRRMGFE 298 (1167)
Q Consensus 265 l~~~fG~~p~~gW~iDpFGh-S~~~p~Ll~~~G~~ 298 (1167)
|++..|..|+ |--=|+|. +..+..+++++|+.
T Consensus 169 i~~~~G~~p~--~fRpP~G~~n~~~~~~l~~~G~~ 201 (268)
T TIGR02873 169 IEATIGVTPK--WFAPPSGSFNDNVVQIAADLQMG 201 (268)
T ss_pred HHHHhCCCCC--EEECCCCCCCHHHHHHHHHCCCe
Confidence 9999999887 66668987 46777888888874
No 22
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=50.08 E-value=18 Score=31.27 Aligned_cols=22 Identities=32% Similarity=0.613 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHCCcEEEeccee
Q 001061 220 SQRASFTNLVKNGQLEIVGGGW 241 (1167)
Q Consensus 220 ~~k~~vk~LV~~GqLEivgGgw 241 (1167)
+.++-+.++|++|+||++||-|
T Consensus 37 eL~~fL~~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 37 ELQEFLDRLVEEGKLECSGGSY 58 (60)
T ss_dssp HHHHHHHHHHHTTSEE--TTEE
T ss_pred HHHHHHHHHHHCCcEEecCCEE
Confidence 3455567899999999998876
No 23
>TIGR03826 YvyF flagellar operon protein TIGR03826. This gene is found in flagellar operons of Bacillus-related organisms. Its function has not been determined and an official gene symbol has not been assigned, although the gene is designated yvyF in B. subtilus. A tentative assignment as a regulator is suggested in the NCBI record GI:16080597.
Probab=43.22 E-value=23 Score=35.87 Aligned_cols=46 Identities=13% Similarity=0.293 Sum_probs=36.9
Q ss_pred HHHHHHHHHhcCCCCcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEec
Q 001061 186 ILDTIVETLSKDARRKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVG 238 (1167)
Q Consensus 186 Ild~vv~~L~~dp~~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivg 238 (1167)
-+..|-+.|.++|.+.-+-.|++ +.+.-..+.|.++|++|||+++.
T Consensus 31 ~f~kV~~yLr~~p~~~ati~eV~-------e~tgVs~~~I~~~IreGRL~~~~ 76 (137)
T TIGR03826 31 EFEKVYKFLRKHENRQATVSEIV-------EETGVSEKLILKFIREGRLQLKH 76 (137)
T ss_pred HHHHHHHHHHHCCCCCCCHHHHH-------HHHCcCHHHHHHHHHcCCeeccC
Confidence 47888899999999877766765 44555568899999999999965
No 24
>KOG4120 consensus G/T mismatch-specific thymine DNA glycosylase [Replication, recombination and repair]
Probab=41.92 E-value=1e+02 Score=35.15 Aligned_cols=80 Identities=19% Similarity=0.319 Sum_probs=51.3
Q ss_pred cceec-cccccCCCHHHHH-HHHHHHHHHHHHhcC-CCCCcceecCCCCCchhHHHHHHHcCCceeEeeccchhhHHHH-
Q 001061 238 GGGWV-MNDEANSHYFAII-EQIMEGNMWLNDTIG-FIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKEL- 313 (1167)
Q Consensus 238 gGgwv-m~DEa~~~~esiI-~Ql~~Gh~~l~~~fG-~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~vi~Ri~~~~K~~~- 313 (1167)
|=|++ |---+.+..-++- ..|.+|-+-|.+.+- ++|++|=- .++.-|++--.+
T Consensus 202 GiGfTNmvaR~t~gsaDL~~kE~~eG~RIL~eKlqryrP~VavF-----------------------nGK~I~E~fsk~~ 258 (426)
T KOG4120|consen 202 GIGFTNMVARPTSGSADLRKKEMQEGARILYEKLQRYRPQVAVF-----------------------NGKGIWEEFSKML 258 (426)
T ss_pred ccchhheeccCCCCcccccHHHHhcchHHHHHHHHhhCcceEEE-----------------------cCcchHHHHHHHh
Confidence 34555 5555555555543 368899999988886 78988643 333334332111
Q ss_pred --hcCCcceEEEEecCCCCCCCceEEEecCC
Q 001061 314 --ALHQNLEYIWRQSWDTEETSDIFVHMMPF 342 (1167)
Q Consensus 314 --~~~k~~eF~Wr~s~~~~~gs~I~th~~p~ 342 (1167)
..-|.++|=|++. --++|+.|+++||.
T Consensus 259 ~g~~~K~f~FG~QP~--k~~dt~tfv~Vmps 287 (426)
T KOG4120|consen 259 TGKLPKTFVFGWQPE--KFGDTNTFVGVMPS 287 (426)
T ss_pred hccCcceeEeccCcc--cCCCcceEEEEccC
Confidence 1237899999863 35689999999994
No 25
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=39.70 E-value=1.2e+02 Score=38.77 Aligned_cols=80 Identities=14% Similarity=0.271 Sum_probs=60.7
Q ss_pred HHHHHHHHCCcEEEecceecccccc--------------------CCCH-------HHHHHHHHHHHHHHHHhcCCCCCc
Q 001061 223 ASFTNLVKNGQLEIVGGGWVMNDEA--------------------NSHY-------FAIIEQIMEGNMWLNDTIGFIPKN 275 (1167)
Q Consensus 223 ~~vk~LV~~GqLEivgGgwvm~DEa--------------------~~~~-------esiI~Ql~~Gh~~l~~~fG~~p~~ 275 (1167)
+++|+++++|-+||-+=+|..+.-. ...| +.+.+.+....+.|++..|..|+.
T Consensus 168 eqIreM~~sGlvEIGSHT~~sH~~l~anp~g~~~pa~~~r~~~~~~~~yEs~~e~~~ri~~DL~~s~~~Ie~~tG~~p~~ 247 (671)
T PRK14582 168 QQVREVARSRLVEIASHTWNSHYGIQANPQGSLLPAAVNRAYFTDHARYETAAEYRERIRLDAVKMTEYIRTKAGKNPRV 247 (671)
T ss_pred HHHHHHHhCCCeEEEcCCchhccccccccccccccchhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 6899999999999977788644311 1123 226678999999999999998875
Q ss_pred ceecCCCCC-chhHHHHHHHcCCceeEeec
Q 001061 276 SWAIDPFGY-SATMAYLLRRMGFENMLIQR 304 (1167)
Q Consensus 276 gW~iDpFGh-S~~~p~Ll~~~G~~~~vi~R 304 (1167)
-.=|||+ +..+..+++++||+..+..+
T Consensus 248 --FayPyG~~n~~~~~iakeaGY~~afT~~ 275 (671)
T PRK14582 248 --WVWPYGEANGIALEELKKLGYDMAFTLE 275 (671)
T ss_pred --EecCCCCCCHHHHHHHHHCCCeEEEEeC
Confidence 4568885 55778999999999877644
No 26
>PRK15394 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; Provisional
Probab=32.29 E-value=1.5e+02 Score=34.26 Aligned_cols=79 Identities=19% Similarity=0.088 Sum_probs=60.0
Q ss_pred HHHHHHHHCCcEEEecceeccc----cccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCchhHHHHHHHcCCc
Q 001061 223 ASFTNLVKNGQLEIVGGGWVMN----DEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFE 298 (1167)
Q Consensus 223 ~~vk~LV~~GqLEivgGgwvm~----DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~ 298 (1167)
+.+|+.+++ -||.+=||.-. .-..-+.+.+.++|..+.+-|++..|..|+ ||..=-+-.+..+..++++.||.
T Consensus 92 ~lvr~i~~~--HEIG~Hg~~H~~wq~~~~~ls~~e~~~eI~ra~~~Le~itG~~p~-g~raPgw~~~~~tl~ll~e~Gf~ 168 (296)
T PRK15394 92 DIIREAAKA--HEVGLHAWDHHAWQAWSGVWSRQQLIEQIARGVDALEEIIGQPVT-CSAAAGWRADQRVVEAKEAFGFR 168 (296)
T ss_pred HHHHHHHhc--CEehhcccCccchhcccccCCHHHHHHHHHHHHHHHHHHhCCCCC-EEeCCCccCCHHHHHHHHHcCCe
Confidence 567787777 99988889854 234456788999999999999999998763 45444444668889999999999
Q ss_pred eeEeec
Q 001061 299 NMLIQR 304 (1167)
Q Consensus 299 ~~vi~R 304 (1167)
+---.|
T Consensus 169 Y~Ss~~ 174 (296)
T PRK15394 169 YNSDCR 174 (296)
T ss_pred eecCCC
Confidence 874443
No 27
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed
Probab=31.10 E-value=1.4e+02 Score=39.56 Aligned_cols=50 Identities=26% Similarity=0.315 Sum_probs=33.0
Q ss_pred eEEEEecCCCCCCchhHHHHHHHhHHHHHHHHhcCCCCCce-EEECCHHHHHHHHHHHh
Q 001061 410 TLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAE-AKFGTLDDYFRTLREEA 467 (1167)
Q Consensus 410 ~lL~p~GdDf~y~~~~~a~~~f~n~~kli~~iN~~~~~~~~-i~~sTl~dYf~al~~~~ 467 (1167)
++|+|-|--+++|+..-+. +++.+.-.- +.++. ++-|||..||.-|+..+
T Consensus 1011 vlLLPHGyEGQGPdHSSaR-----iERfLqlcA---e~nm~Va~psTPA~yFHLLRrqa 1061 (1228)
T PRK12270 1011 VLLLPHGYEGQGPDHSSAR-----IERFLQLCA---EGNMTVAQPSTPANYFHLLRRQA 1061 (1228)
T ss_pred EEEccCCcCCCCCCcchHH-----HHHHHHhhc---cCCeEEEccCChHHHHHHHHHHh
Confidence 5778999888888644433 333333222 22443 57799999999998865
No 28
>COG4744 Uncharacterized conserved protein [Function unknown]
Probab=29.20 E-value=82 Score=30.51 Aligned_cols=35 Identities=26% Similarity=0.431 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc
Q 001061 46 VFANFFTIALAVSVSFFLLTIFFFGVPTPISSHFK 80 (1167)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1167)
-.+|.|=.++++|++|+++...-+++|+-+++.-+
T Consensus 24 GvANLfDaamVfsva~LI~lv~Sy~lp~~lss~~~ 58 (121)
T COG4744 24 GVANLFDAAMVFSVALLIALVMSYHLPELLSSNED 58 (121)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCC
Confidence 35899999999999999999999999998887643
No 29
>PF06143 Baculo_11_kDa: Baculovirus 11 kDa family; InterPro: IPR009313 This is a family of uncharacterised Baculovirus proteins that are all about 11 kDa in size.
Probab=28.01 E-value=81 Score=29.25 Aligned_cols=36 Identities=22% Similarity=0.433 Sum_probs=22.9
Q ss_pred CcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 001061 33 SRKSRKRTALINFVFANFFTIALAVSVSFFLLTIFFFGV 71 (1167)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (1167)
.=-+|-|+++++|+. ++.|+.+.+...+|+++.+-|
T Consensus 24 qlVsrN~sfirdFvL---Vic~~lVfVii~lFi~ll~~i 59 (84)
T PF06143_consen 24 QLVSRNRSFIRDFVL---VICCFLVFVIIVLFILLLYNI 59 (84)
T ss_pred HHHHhChHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 344789999999998 555555555444444444433
No 30
>TIGR03092 SASP_sspI small, acid-soluble spore protein I. This protein family is restricted to a subset of endospore-forming bacteria such as Bacillus subtilis, all of which are in the Firmicutes (low-GC Gram-positive) lineage. It is a minor SASP (small, acid-soluble spore protein) designated SspI. The gene in Bacillus subtilis previously was designated ysfA.
Probab=25.08 E-value=76 Score=27.85 Aligned_cols=25 Identities=16% Similarity=0.532 Sum_probs=21.6
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHCC
Q 001061 208 SYLERWWRDSSESQRASFTNLVKNG 232 (1167)
Q Consensus 208 s~f~~Ww~~~~p~~k~~vk~LV~~G 232 (1167)
..|+.||+..+++.|+.+-..+.+|
T Consensus 39 VlFE~~W~~~~~~ek~~m~~~l~~~ 63 (65)
T TIGR03092 39 VLFEAIWKHANEQEKDEMLETLEQG 63 (65)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 5799999999999999988877665
No 31
>PF12911 OppC_N: N-terminal TM domain of oligopeptide transport permease C
Probab=24.96 E-value=82 Score=26.34 Aligned_cols=33 Identities=27% Similarity=0.306 Sum_probs=24.5
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001061 36 SRKRTALINFVFANFFTIALAVSVSFFLLTIFF 68 (1167)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (1167)
+.-+-++..|.......+|+++.+++++++++-
T Consensus 3 s~~~~~~~~f~~nk~a~~gl~il~~~vl~ai~~ 35 (56)
T PF12911_consen 3 SPWKDAWRRFRRNKLAVIGLIILLILVLLAIFA 35 (56)
T ss_pred CHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 344567778888888888888888777777653
No 32
>PRK10148 hypothetical protein; Provisional
Probab=24.81 E-value=25 Score=35.99 Aligned_cols=18 Identities=17% Similarity=0.095 Sum_probs=15.2
Q ss_pred CCcceecCCCCCchhHHH
Q 001061 273 PKNSWAIDPFGYSATMAY 290 (1167)
Q Consensus 273 p~~gW~iDpFGhS~~~p~ 290 (1167)
++.||..|+||++|++-.
T Consensus 123 ~~~g~v~D~fGi~W~l~~ 140 (147)
T PRK10148 123 HGFGKVTDKFGVPWMINV 140 (147)
T ss_pred hccEEEECCCCCEEEEEe
Confidence 578999999999997643
No 33
>PF12395 DUF3658: Protein of unknown function ; InterPro: IPR022123 This domain family is found in bacteria, and is approximately 110 amino acids in length. The family is found in association with PF08874 from PFAM. There are two completely conserved residues (D and R) that may be functionally important.
Probab=23.69 E-value=95 Score=30.28 Aligned_cols=68 Identities=18% Similarity=0.312 Sum_probs=39.8
Q ss_pred EEEeeccccCccccccHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEec
Q 001061 159 IFVVPHSHNDPGWKLTVDEYYDRQSRHILDTIVETLSKDARRKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVG 238 (1167)
Q Consensus 159 V~vVpHSH~D~GWl~T~deyy~~~v~~Ild~vv~~L~~dp~~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivg 238 (1167)
|.=||-.|.|.--+...+.-|.... .++-.|+..+.... .+|| ..-++++||++|+||+.|
T Consensus 41 i~sv~ed~yD~~Il~~~~~~~~~~a-rvIg~vl~~~~~~i------------~D~f------~~~Ri~~Li~~G~le~~g 101 (111)
T PF12395_consen 41 IVSVPEDYYDDFILEQAPDEFQKAA-RVIGEVLGHSDQGI------------GDWF------LEYRIRELISQGVLEIKG 101 (111)
T ss_pred EEecChHHhhHHHHhcCCccccHHH-HHHHHHHHhcCcCC------------ChHH------HHHHHHHHHHCCCEEEec
Confidence 3344555556555554444444444 35677777653221 1233 234899999999999977
Q ss_pred ceecccc
Q 001061 239 GGWVMND 245 (1167)
Q Consensus 239 Ggwvm~D 245 (1167)
-.-.|.+
T Consensus 102 ~~~~mr~ 108 (111)
T PF12395_consen 102 DPKDMRH 108 (111)
T ss_pred CCCcccc
Confidence 6555543
No 34
>PF02929 Bgal_small_N: Beta galactosidase small chain; InterPro: IPR004199 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Beta-galactosidase enzymes (3.2.1.23 from EC) belong to several glycoside hydrolase families: GH1 from CAZY, GH2 from CAZY, GH35 from CAZY and GH42 from CAZY. Beta-galactosidase is the product of the lac operon Z gene of Escherichia coli. This enzyme catalyses the hydrolysis of the disaccharide lactose to galactose and glucose, and can also convert lactose to allolactose, the inducer of the lac operon. This domain is found in single chain beta-galactosidases, which are comprised of five domains. The active site is located in a deep pocket built around the central alpha-beta barrel, with the other domains conferring specificity for a disaccharide substrate. This entry represents domain 5 of glycoside hydrolase family 2, which contains an N-terminal loop that swings towards the active site upon the deep binding of a ligand to produce a closed conformation []. This domain is also found in the amino-terminal portion of the small chain of dimeric beta-galactosidases.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1JZ3_D 1JYY_H 1GHO_P 3VD9_B 3I3E_B 3T0B_A 3T09_C 1F4A_D 3VDC_C 3VDB_D ....
Probab=22.82 E-value=1.1e+03 Score=26.58 Aligned_cols=37 Identities=16% Similarity=0.312 Sum_probs=24.8
Q ss_pred EEeeCeEEEEEEccCceEEEEEccCCcEEEe-eeeeeee
Q 001061 758 DIRNRHQILSFDVRHGLLQKISHINGSQNVV-EEEIDMY 795 (1167)
Q Consensus 758 ~IEN~~~~l~fd~~tGlL~si~~k~g~~~~v-~~~f~~Y 795 (1167)
+|.++..++.||..+|.|+|+.. +|+++.. ...+..|
T Consensus 1 tV~g~~f~~~Fdk~~G~l~s~~~-~g~~ll~~~~~~nfw 38 (276)
T PF02929_consen 1 TVSGKDFSYVFDKKTGTLTSYKY-NGKELLKRGPKPNFW 38 (276)
T ss_dssp -EEETTEEEEEETTTTCEEEEEE-TTEEEECEEEEEE--
T ss_pred CCccCCEEEEEECCCCeEEEEEE-CCEEeecCCCcccEE
Confidence 36778889999999999999984 5655532 3344444
No 35
>PF13289 SIR2_2: SIR2-like domain
Probab=22.54 E-value=4.8e+02 Score=25.63 Aligned_cols=83 Identities=19% Similarity=0.293 Sum_probs=55.0
Q ss_pred EEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCC
Q 001061 202 FIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDP 281 (1167)
Q Consensus 202 Fi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDp 281 (1167)
++..+-.|.+ +. ...+...+.++.+.++.-+-|| ||-+.|+ + |++++ +++.+..+..++..|.+.+
T Consensus 59 ~vlt~~~y~~-~~-~~~~~~~~~l~~~l~~~~~lfi--Gys~~D~---~----i~~~l---~~~~~~~~~~~~~~~~v~~ 124 (143)
T PF13289_consen 59 IVLTEDDYEE-YY-SSNPWFPNFLRSLLRSKTLLFI--GYSFNDP---D----IRQLL---RSALENSGKSRPRHYIVIP 124 (143)
T ss_pred EEEcHHHHHH-Hh-hhHHHHHHHHHHHHcCCCEEEE--EECCCCH---H----HHHHH---HHHHHhccCCCccEEEEEc
Confidence 4555434333 22 2456677889999999999998 6667775 2 33333 3455566665556677777
Q ss_pred CCCchhHHHHHHHcCCc
Q 001061 282 FGYSATMAYLLRRMGFE 298 (1167)
Q Consensus 282 FGhS~~~p~Ll~~~G~~ 298 (1167)
-.-......++++.|++
T Consensus 125 ~~~~~~~~~~~~~~~i~ 141 (143)
T PF13289_consen 125 DPDDENEREFLEKYGIE 141 (143)
T ss_pred CCchHHHHHHHHHcCCE
Confidence 77677888888888886
No 36
>PF15590 Imm15: Immunity protein 15
Probab=20.47 E-value=61 Score=28.67 Aligned_cols=29 Identities=24% Similarity=0.463 Sum_probs=22.7
Q ss_pred ccceeeeecCCCCCCcceEEEEeeccccCcc
Q 001061 140 KQGWDVKYRGDEWDHEKLKIFVVPHSHNDPG 170 (1167)
Q Consensus 140 kqg~~~~~~~~~~~~~~l~V~vVpHSH~D~G 170 (1167)
+|||++.|..+ +.+..-+-+-||||+--|
T Consensus 22 ~d~We~~y~DP--~D~r~W~~~~~~s~~hGG 50 (69)
T PF15590_consen 22 PDGWETLYQDP--RDGRYWEKSYPESHMHGG 50 (69)
T ss_pred CcchhhhccCC--CCCceeEEecCcccccCC
Confidence 57899988876 556677888899998755
Done!