Query 001061
Match_columns 1167
No_of_seqs 334 out of 1238
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 09:02:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001061.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001061hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bvx_A Alpha-mannosidase 2; fa 100.0 2E-192 6E-197 1848.8 97.8 983 112-1165 35-1045(1045)
2 2wyh_A Alpha-mannosidase; hydr 100.0 7E-117 2E-121 1137.2 86.2 811 153-1164 22-923 (923)
3 3lvt_A Glycosyl hydrolase, fam 100.0 2E-107 7E-112 1042.3 83.1 671 155-962 5-754 (899)
4 1o7d_A Lysosomal alpha-mannosi 100.0 2.6E-71 8.8E-76 622.1 31.6 281 141-447 1-296 (298)
5 1o7d_D Lysosomal alpha-mannosi 100.0 2.1E-56 7.1E-61 492.1 27.0 250 756-1029 2-272 (282)
6 1o7d_C Lysosomal alpha-mannosi 99.9 1.1E-27 3.8E-32 246.2 16.7 148 555-722 3-150 (159)
7 1o7d_B Lysosomal alpha-mannosi 99.9 3.4E-23 1.2E-27 186.0 6.7 74 447-536 1-74 (84)
8 1o7d_E Lysosomal alpha-mannosi 99.7 6.3E-18 2.2E-22 165.1 8.9 110 1040-1167 3-124 (126)
9 1k1x_A 4-alpha-glucanotransfer 99.7 2.6E-15 9E-20 185.2 28.8 144 156-305 3-147 (659)
10 3p0b_A TT1467 protein; glycosi 98.9 1.2E-07 4.2E-12 112.6 24.0 90 213-303 136-243 (540)
11 2b5d_X Alpha-amylase; (beta/al 98.8 2.2E-06 7.6E-11 103.3 32.4 146 157-304 3-208 (528)
12 3n98_A Alpha-amylase, GH57 fam 98.7 2.6E-07 9E-12 110.2 20.3 90 213-303 115-220 (562)
13 3s6o_A Polysaccharide deacetyl 95.8 1.7 5.8E-05 48.9 25.3 219 187-466 88-308 (321)
14 3rxz_A Polysaccharide deacetyl 95.0 4.6 0.00016 44.7 24.9 109 185-305 62-172 (300)
15 3cl6_A PUUE allantoinase; URIC 92.3 0.95 3.2E-05 50.6 13.0 116 172-304 72-189 (308)
16 2cc0_A Acetyl-xylan esterase; 89.2 1.9 6.6E-05 44.5 11.0 100 187-299 19-121 (195)
17 2y8u_A Chitin deacetylase; hyd 87.8 2.4 8.2E-05 45.2 10.8 99 188-299 48-149 (230)
18 3qbu_A Putative uncharacterize 87.7 3 0.0001 46.9 12.1 106 186-303 75-182 (326)
19 1ny1_A Probable polysaccharide 81.1 6.1 0.00021 42.3 10.3 98 189-299 60-161 (240)
20 2iw0_A Chitin deacetylase; hyd 78.4 2.8 9.6E-05 45.4 6.6 75 222-299 88-163 (254)
21 2w3z_A Putative deacetylase; P 75.2 13 0.00045 41.4 11.1 100 188-299 123-236 (311)
22 2j13_A Polysaccharide deacetyl 73.5 5.2 0.00018 43.0 7.0 76 223-300 98-174 (247)
23 3vus_A Poly-beta-1,6-N-acetyl- 71.8 12 0.0004 40.8 9.4 81 222-304 126-234 (268)
24 2vyo_A ECU11_0510, chitooligos 70.1 9.1 0.00031 41.3 8.0 73 223-298 71-148 (254)
25 1u69_A Hypothetical protein; s 50.4 6.3 0.00022 39.7 2.1 15 274-288 106-120 (163)
26 4f9d_A Poly-beta-1,6-N-acetyl- 43.3 40 0.0014 41.1 7.9 81 222-304 130-238 (618)
27 2c71_A Glycoside hydrolase, fa 43.0 32 0.0011 36.0 6.2 87 188-286 21-109 (216)
28 2c1i_A Peptidoglycan glcnac de 41.7 38 0.0013 39.4 7.2 96 188-298 252-349 (431)
29 4hd5_A Polysaccharide deacetyl 34.0 86 0.0029 35.5 8.2 79 222-304 247-325 (360)
30 4esj_A Type-2 restriction enzy 20.0 71 0.0024 33.8 3.8 58 184-241 189-253 (257)
No 1
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=100.00 E-value=1.8e-192 Score=1848.75 Aligned_cols=983 Identities=39% Similarity=0.668 Sum_probs=847.5
Q ss_pred cccccCCccchhcccccceeecCCCCccccceeeeecCCCCCCc-ceEEEEeeccccCccccccHHHHHHHHHHHHHHHH
Q 001061 112 VVLEAEVDLTTKGLYDKIQFLDVDGGAWKQGWDVKYRGDEWDHE-KLKIFVVPHSHNDPGWKLTVDEYYDRQSRHILDTI 190 (1167)
Q Consensus 112 ~~~~~~~~~~~~~~y~~~~f~~~~gg~wkqg~~~~~~~~~~~~~-~l~V~vVpHSH~D~GWl~T~deyy~~~v~~Ild~v 190 (1167)
.+.++++|+||+|+|++++|+|+|||+|||||++.|+.++|+.+ +++||+|||||+|+||+||+++||++.+++||++|
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~lV~HsH~D~gWl~t~~e~~~~~~~~~~~~v 114 (1045)
T 3bvx_A 35 VQDVPNVDVQMLELYDRMSFKDIDGGVWKQGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQHDTKHILSNA 114 (1045)
T ss_dssp SSCCCCCSEEHHHHHHHCCCCCCCCSSSTTSCCCCCCGGGSBTTBCEEEEEEEEEECCSSSSSCHHHHHHHTHHHHHHHH
T ss_pred ccccCCCCeeHHHHHhcCCccCCCCccccccchhhhhccccCCCCceEEEEEecCCCCccccchHHHhhhHHHHHHHHHH
Confidence 33477999999999999999999999999999999999999976 99999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHHHHhcC
Q 001061 191 VETLSKDARRKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIG 270 (1167)
Q Consensus 191 v~~L~~dp~~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG 270 (1167)
+++|++||++||+|+|++||++||++++|+.+++||+||++||||||||||||+|||++|||||||||++||+|++++||
T Consensus 115 l~~L~~~p~~~F~~~e~~~l~~w~~e~~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG 194 (1045)
T 3bvx_A 115 LRHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMN 194 (1045)
T ss_dssp HHHHHHCTTCCEEECCHHHHHHHHHHSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCcEEEEecHHHHHHHHHHCCHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceecCCCCCchhHHHHHHHcCCceeEeeccchhhHHHHhcCCcceEEEEecCCCCCCCceEEEecCCcccCCCCC
Q 001061 271 FIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHT 350 (1167)
Q Consensus 271 ~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~vi~Ri~~~~K~~~~~~k~~eF~Wr~s~~~~~gs~I~th~~p~y~Y~~p~t 350 (1167)
+.|++||+|||||||++||+||++|||++++++|++|++|+.++..+.+||+|+|+|+++|||+||||++|+++|++||+
T Consensus 195 ~~~~~~W~pD~FG~s~~lPqil~~~Gi~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~~p~~~Y~~~~~ 274 (1045)
T 3bvx_A 195 VTPTASWAIAPFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHT 274 (1045)
T ss_dssp CCCCEEEECCSSSBCTHHHHHHHTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGT
T ss_pred CCCceEEcCCCCCccHHHHHHHHHcCCCeEEEecccccccccccccCCceEEEeCCCCCCCCCeEEEEeccccccCcccc
Confidence 99999999999999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred CCCCCcccccccccccCCcccccCCCCCCCCCCCHhHHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCchhHHHHH
Q 001061 351 CGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQ 430 (1167)
Q Consensus 351 cgp~p~ic~~fDf~r~~g~~~~~cpw~~~p~~i~~~Nv~~ra~~ll~~~~k~s~~y~tn~lL~p~GdDf~y~~~~~a~~~ 430 (1167)
|||+|+|||+|||++++|+.+ .|||+++|.+++++|+++|+..+++++++++.+|+++++|+|+|+||+|.++.+|+.|
T Consensus 275 ~gp~~~~c~~fdf~~l~~~~~-~~~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~ 353 (1045)
T 3bvx_A 275 CGPDPKVCCQFDFKRMGSFGL-SCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQ 353 (1045)
T ss_dssp SSSCHHHHGGGCGGGSSTTSC-CCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHH
T ss_pred cCCCccccccccccccccccc-cCcccCCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHH
Confidence 999999999999999998765 6999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhcCCCCCceEEECCHHHHHHHHHHHhhcccCCCCCccCCCCccCCCceecccccccccCCccceeeeec
Q 001061 431 FRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVS 510 (1167)
Q Consensus 431 f~n~~kli~~iN~~~~~~~~i~~sTl~dYf~al~~~~~~~~~~~~ge~~~~~~~~~P~~~GDffpYad~~~~yWtGyyTS 510 (1167)
|+||++||+|||++++..++++|||++|||++|+++... ....||+++||||+|+++.++||+|||||
T Consensus 354 ~~n~~~li~~in~~~~~~~~v~~sT~~~yf~~l~~~~~~------------~~~~lp~~~Ge~~~~~~~~~~yw~G~yTS 421 (1045)
T 3bvx_A 354 RVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERA------------GQAEFPTLSGDFFTYADRSDNYWSGYYTS 421 (1045)
T ss_dssp HHHHHHHHHHHHHCGGGCEEEEECCHHHHHHHHHHHHHT------------TSCCCCEEESCBCSCEEETTEECCGGGTS
T ss_pred HHHHHHHHHHHhhCCCCCceEEECCHHHHHHHHHhhccc------------ccccCcccCCcccccccCCcccccceecc
Confidence 999999999999987667899999999999999986431 01369999999999999999999999999
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHhhccccccccCChhHHHHHHHHHHHhhhhcccCCCCCCChhhHHHHHHHHHHHH
Q 001061 511 RPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTS 590 (1167)
Q Consensus 511 Rp~~K~~~R~~e~~Lr~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~a~r~l~l~QHHDaItGTsk~~V~~Dy~~rL~~a 590 (1167)
||++|+++|++|++|++||+|+++|... +..|| .+.|++||++|+++||||+||||++++|++||.+||.+|
T Consensus 422 r~~~K~~nR~~e~~L~~aE~l~ala~~~-----~~~~~---~~~L~~~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a 493 (1045)
T 3bvx_A 422 RPYHKRMDRVLMHYVRAAEMLSAWHSWD-----GMARI---EERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEA 493 (1045)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTSCCC-----GGGCH---HHHHHHHHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCcc---HHHHHHHHHHHhccccccCCCCcChHHHHHHHHHHHHHH
Confidence 9999999999999999999999987432 23454 578999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccccc--cCCCccccccccc-cccCCCCcceeeeccCCC---cceEEEEcCCCcceeEEEEEE
Q 001061 591 LQDLQIFMSKAIEVLLGIRERY--DQNLSQFEPEQVR-SKYDAQPVHKVINVHEGT---SQSVVIFNPLEQTREEIVMVI 664 (1167)
Q Consensus 591 ~~~~~~vi~~al~~Ll~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~---~~~vvvfNpL~~~R~~vV~v~ 664 (1167)
.+.++.++.++++.|+...... +.....++.+..+ .+++.||.+..+.++. + ...|+|||||+|+|+++|+|+
T Consensus 494 ~~~~~~l~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~vvvfN~L~~~r~~~V~v~ 572 (1045)
T 3bvx_A 494 LKACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDSRWPGSGVEDSRTTIILGE-DILPSKHVVMHNTLPHWREQLVDFY 572 (1045)
T ss_dssp HHHHHHHHHHHHHHHTBCTTTCCCCTTSCSEEEECSSSSCTTTCCCCCEECCBT-TTBSEEEEEEEECSSSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhhccccccccccccccchhhhcccccccccccccccccc-cccCCceEEEEcCCCcceeeEEEEE
Confidence 9999999999999887432111 1111223332232 4566677665554432 2 567999999999999999999
Q ss_pred EecCcEEEEeCCCeEEEEeeccccccCCc--------ccccCcEEEEEEEecCCCeeEEEEEEcCccccCCCCccceecc
Q 001061 665 VNRPDITVLDSNWTCVQSQISPELRHGKS--------KIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLKYS 736 (1167)
Q Consensus 665 V~~~~v~V~d~~G~~V~~Qi~p~~~~~~~--------~~~~~~~~L~F~a~vPpLG~~ty~I~~~~~~~~~~~~~~~~~~ 736 (1167)
|..+.+.|+|.+|++|++|+++.+..... ....+.|+|+|.|+||||||++|+|...........++.+..-
T Consensus 573 v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~L~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~ 652 (1045)
T 3bvx_A 573 VSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTIHPQGSTTKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLL 652 (1045)
T ss_dssp ESCSCEEEEETTCCEECEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEEECTTEEEEEEEEECSSCCTTEEECEEEEE
T ss_pred eccCceEEEcCCCCEEeEEEeeccccccccccccccccCCCCcEEEEEEeccCCceeEEEEEEecCCccccccccceeec
Confidence 99999999999999999999987643110 0134578999999999999999999876432110011111110
Q ss_pred CCCCCCCCCCCcccc--CCCCceEEeeCeE------EEEEEccCceEEEEEc-cCCcEEEeeeeeeeeccC----CCCce
Q 001061 737 SDNSFSCPTPYACSK--IEGDVADIRNRHQ------ILSFDVRHGLLQKISH-INGSQNVVEEEIDMYSSQ----GSGAY 803 (1167)
Q Consensus 737 ~~~~~~~~~~~~~~~--~~~~~~~IEN~~~------~l~fd~~tGlL~si~~-k~g~~~~v~~~f~~Y~s~----~SGAY 803 (1167)
. .++.++.... ...+...|||+++ +|+||+ +|+|++|++ ++|++..+.++|.+|.+. .||||
T Consensus 653 ~----~~~~~~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~G~L~si~dk~~g~e~~~~~~f~~Y~~~~~~~~sgaY 727 (1045)
T 3bvx_A 653 R----KNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-QGLLKSIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAY 727 (1045)
T ss_dssp C----SSCCCCCCTTCSSCCEEECCCCEEEECTTSCEEEECT-TSCEEEEECSTTSCCEEEEEEEEEECBCSSSCCCCSS
T ss_pred c----cccccccccccccCCCceeecccccccccccEEEECC-CCcEEEEEEcCCCeEEEEeeEEEEEecccCCCCCcce
Confidence 0 0111121111 1234578999999 999998 899999995 579999999999999753 78999
Q ss_pred eeccCCCCcccccCCcEEEEEeCCceEEEEEeecccccCccEEEEEEEeeCCCccceeEEEEEEEeeeccCCCCCcEEEE
Q 001061 804 LFMPNGDAHPITEAGGLMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIV 883 (1167)
Q Consensus 804 iF~P~g~~~~~~~~~~~~~v~~Gpl~sev~~~~~~~~~~s~i~~~vrLy~~~~~~~~~~iEi~~~Vd~~~~~~~n~El~~ 883 (1167)
+|+|++++.++......+.+++|||+++|++.+. +++|++|| +.+ .|||+++||+.+ ..|||+++
T Consensus 728 ~F~P~~~~~~~~~~~~~~~v~~Gpl~~ev~~~~~------~i~q~irL--~~~-----~ieie~~Vd~~~--~~~~el~~ 792 (1045)
T 3bvx_A 728 LFLPNGPASPVELGQPVVLVTKGKLESSVSVGLP------SVVHQTIM--RGG-----APEIRNLVDIGS--LDNTEIVM 792 (1045)
T ss_dssp CCCBSSSCEECCCCSCCEEEEECSSCEEEEEEET------TEEEEEEE--SSS-----SCEEEEEECCTT--CTTEEEEE
T ss_pred EecCCCCCcccccCCceEEEEeCCeEEEEEEEEe------eEEEEEEE--CCe-----eEEEEEEEecCC--CCCeEEEE
Confidence 9999998877665555677899999999999862 59999999 443 699999998743 35899999
Q ss_pred EEEeecCCCceEEEccCCccccccCccCCCCCCcceEeccceEEEecCCCCeeEEeecCCcceeeccCCeEEEEEccccc
Q 001061 884 RYKTDIDNKRIFYSDLNGFQMSRRETYDKIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLS 963 (1167)
Q Consensus 884 rf~T~I~s~~~fYTD~NG~q~ikR~~~~~~pv~~NyYP~~s~a~I~D~~~~rltvltdrs~G~sSl~~G~lElmL~RRl~ 963 (1167)
||+|+|++++.||||+|||++++|++..++|+++|||||+++|+|+|++ .|||||+||++||||+++|+|||||||||+
T Consensus 793 rf~t~i~s~~~fyTD~nG~~~ikR~~~~~~p~~~NyYPv~s~~~i~D~~-~~ltvl~drs~G~sSl~~G~lElmlhRrl~ 871 (1045)
T 3bvx_A 793 RLETHIDSGDIFYTDLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDAN-TRLTLLTGQPLGGSSLASGELEIMQDRRLA 871 (1045)
T ss_dssp EEEECCCCTTEEEEEETTTEEEEEECCTTSCGGGGCEEESSEEEEECSS-EEEEEEESSCEEEECCSTTEEEEEEEEEBC
T ss_pred EeecccCCCCeEEEecCCceeEEcCCCCCCCcccceEEeeeeEEEEcCC-eeEEEEecCCccccccCCCeEEEEEeeeec
Confidence 9999999998999999999999999988999999999999999999985 899999999999999999999999999999
Q ss_pred cCCCCCCCcCccCCcceeEEEEEEEecccccCccCCCCCcccCcchhhhhccccccccceeeeccCCCCCcCCCCCCCcC
Q 001061 964 RDDGRGLGQGVLDNRAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQPPPRSFS 1043 (1167)
Q Consensus 964 ~DD~rGlge~l~Dn~~~~~~f~llle~~~~~~~~~~~~~~~~~psl~sh~~~~~l~~P~~~~~~~~~~~~~~~~~~~~fs 1043 (1167)
+||+|||||||+|++++..+|+|+++....+.......+..+ ||+++|..++.|++|+++|+.+... ......+|+
T Consensus 872 ~DD~rGvge~l~d~~~~~~~~~l~l~~~~~~~~~~~~~~~~~-~s~~~~~~~~~l~~p~~~~~~~~~~---~~~~~~~~~ 947 (1045)
T 3bvx_A 872 SDDERGLGQGVLDNKPVLHIYRLVLEKVNNCVRPSKLHPAGY-LTSAAHKASQSLLDPLDKFIFAENE---WIGAQGQFG 947 (1045)
T ss_dssp SCCSSSCCSCBCCCCCEEEEEEEEEEECTTSCCCCTTCSEEC-CCHHHHHHHHHHHSCCEEEEECSSC---CTTBCSEEC
T ss_pred cCCcccccccccCCceeeeEEEEEEecccccccccccccccc-cCHHHHHHHHHHhCCcceeeccCcc---cccccccCC
Confidence 999999999999999999999999998654332223334445 8999999999999999999876322 223467899
Q ss_pred CCCCCCCCceeEEeeecCCCCCCCCCCCCccceeEEEEeeccCcccccCCCCccccccccccchhhhcccCccceEEEcc
Q 001061 1044 PLAGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKATS 1123 (1167)
Q Consensus 1044 ~l~~~LP~dvHLltLr~~~~~~~~~~~~~~~r~~liL~r~~~d~~~~~~~~~~c~~~~~~~v~l~~LF~~~~v~~~~ets 1123 (1167)
||..+|||||||||||++++.+. ...+++|+|||.|+||++..+ +.+++|+|++||+. |.+++|||
T Consensus 948 ~l~~~lP~~vhlltL~~~~~~~~-----~~~~~ll~L~~~~~~~~~~~~-------s~~~~~~l~~lf~~--i~~~~ets 1013 (1045)
T 3bvx_A 948 GDHPSAREDLDVSVMRRLTKSSA-----KTQRVGYVLHRTNLMQCGTPE-------EHTQKLDVCHLLPN--VARCERTT 1013 (1045)
T ss_dssp TTSCCCCTTEEEEEEEECSCTTC-----SEEEEEEEEEECCCCCCSCCC-------CCCCCCCGGGSSSS--EEEEEEEC
T ss_pred cccccCCCCEEEEEeEecCCCCc-----cCceEEEEEeeeccccCcCcc-------cCcccccHHHHhcC--cceEEEec
Confidence 99999999999999999986432 123478899999999986322 22567999999998 99999999
Q ss_pred ccCccccccccCCCCcccCCCCCCceEeccceeeEEEEEEee
Q 001061 1124 LNLLNDDIGMLGYPEQLEDVSQDGQVTIAPMEIQAYKLEMRP 1165 (1167)
Q Consensus 1124 Lt~~~~~~~~~~~~~~~~~~~~~~~v~L~PMEIrTf~i~~~~ 1165 (1167)
|++++...++ .....|+|+|||||||+|++++
T Consensus 1014 L~~~~~~~~~----------~~~~~v~l~PmeirTf~i~~~~ 1045 (1045)
T 3bvx_A 1014 LTFLQNLEHL----------DGMVAPEVCPMETAAYVSSHSS 1045 (1045)
T ss_dssp TTSCSEEEEC----------GGGCCCCCCTTCEEEEEEEEEC
T ss_pred ccCCcccccc----------CCCcceEEcCceeEEEEEEeeC
Confidence 9998876532 1345899999999999999974
No 2
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=100.00 E-value=7.1e-117 Score=1137.23 Aligned_cols=811 Identities=16% Similarity=0.198 Sum_probs=622.2
Q ss_pred CCcceEEEEeeccccCccccccHHHHHHHHHHHHHHHHHHHHhcCCCCc-EEEechHHHHHHHHhcCHHHHHHHHHHHHC
Q 001061 153 DHEKLKIFVVPHSHNDPGWKLTVDEYYDRQSRHILDTIVETLSKDARRK-FIWEEMSYLERWWRDSSESQRASFTNLVKN 231 (1167)
Q Consensus 153 ~~~~l~V~vVpHSH~D~GWl~T~deyy~~~v~~Ild~vv~~L~~dp~~k-Fi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~ 231 (1167)
+..+++||+|||||+|+||+||+++|+.. +++||++|+++|++||+++ |+|+|.+++.+||.+++|+.+++||+||++
T Consensus 22 ~~~~~~v~~v~HsH~D~~Wl~t~~~~~~~-~~~~~~~vl~~l~~~p~~~~F~~~~q~~~~~~~~~~~p~~~~~vk~lV~~ 100 (923)
T 2wyh_A 22 AMATKKVHIISHSHWDREWYMAYEQHHMR-LINLIDDLLEVFQTDPDFHSFHLDGQTIILDDYLKVRPEREPEIRQAIAS 100 (923)
T ss_dssp CCCCEEEEEEEBCBCCSSSSSCHHHHHHH-HHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHHHCGGGHHHHHHHHHT
T ss_pred CCCceEEEEEccCCCCcccccHHHHHHHH-HHHHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHHCHHHHHHHHHHHHc
Confidence 35678999999999999999999999765 5578999999999999998 999865555578889999999999999999
Q ss_pred CcEEEecceeccccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCchhHHHHHHHcCCceeEeeccc----h
Q 001061 232 GQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTH----Y 307 (1167)
Q Consensus 232 GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~vi~Ri~----~ 307 (1167)
||||| ||||||+|||++||||+||||++||+|+++ ||+.|++||+|||||||++|||||++|||++++++|++ |
T Consensus 101 Grlei-G~wYv~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~pD~FG~s~~lPqil~~~Gi~~~~~~R~~~~~~~ 178 (923)
T 2wyh_A 101 GKLRI-GPFYILQDDFLTSSESNVRNMLIGKEDCDR-WGASVPLGYFPDTFGNMGQTPQLMLKAGLQAAAFGRGIRPTGF 178 (923)
T ss_dssp TSEEC-CSBSSCBCSTTSCHHHHHHHHHHHHHHHHH-HTCCCSSEEESSCSSBCTTHHHHHHTTTCCEEEECSSCEECCS
T ss_pred CCEEE-eeeeeccccccCCHHHHHHHHHHHHHHHHH-cCCCCceeEecCCCCcchHHHHHHHHcCCCEEEEEeccccccc
Confidence 99997 555599999999999999999999999999 99999999999999999999999999999999999999 8
Q ss_pred hhH---HHHhcCCcceEEEEecCCCCCCCceEEEecCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCC
Q 001061 308 ELK---KELALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETN 384 (1167)
Q Consensus 308 ~~K---~~~~~~k~~eF~Wr~s~~~~~gs~I~th~~p~y~Y~~p~tcgp~p~ic~~fDf~r~~g~~~~~cpw~~~p~~i~ 384 (1167)
++| ..+...+.+||+|+ ++|||+||||+|| ++|+ ||. +.+++
T Consensus 179 n~~~~~~~~~~~~~~eF~W~----g~dGs~Ilt~~~p-~~Y~----~g~--------------------------~~~~~ 223 (923)
T 2wyh_A 179 NNQVDTSEKYSSQFSEISWQ----GPDNSRILGLLFA-NWYS----NGN--------------------------EIPTT 223 (923)
T ss_dssp SSCCCTTCTTEESSSEEEEE----CTTCCEEEEEECT-TCTT----TTC--------------------------SCCSS
T ss_pred cccccchhhccCCCceEEEE----CCCCCeEEEEECC-CCcc----CCC--------------------------CCCCC
Confidence 765 23445678999999 5789999999999 5884 221 12356
Q ss_pred HhHHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCchhHHHHHHHhHHHHHHHHhc-CCCCCceEEECCHHHHHHHH
Q 001061 385 QENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINS-NPSLNAEAKFGTLDDYFRTL 463 (1167)
Q Consensus 385 ~~Nv~~ra~~ll~~~~k~s~~y~tn~lL~p~GdDf~y~~~~~a~~~f~n~~kli~~iN~-~~~~~~~i~~sTl~dYf~al 463 (1167)
++|+++++..+++..++ .++++++|+|+|+||+|+. +||+++|+++|+ .+ .++++|||++|||++|
T Consensus 224 ~~~v~~~~~~~~~~~~~---~~~t~~~l~~~G~D~~~~~--------~~~~~~i~~~n~~~~--~~~~~~sT~~~yf~~l 290 (923)
T 2wyh_A 224 EAEARLFWDKKLADAER---FASTKHLLMMNGCDHQPVQ--------LDVTKAIALANQLYP--DYEFVHSCFEDYLADL 290 (923)
T ss_dssp HHHHHHHHHHHHHHHHH---HCSSSEEEEEECCBTCCCC--------TTHHHHHHHHHHHCT--TEEEEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh---cCCCCeEEEEeecCCCCcc--------hhHHHHHHHHHhhCC--CceEEECCHHHHHHHH
Confidence 78888777666665543 3689999999999999975 789999999998 44 5799999999999999
Q ss_pred HHHhhcccCCCCCccCCCCccCCCceecccccccccCCccc---eeeeecchhhhhhhHHHHHHH-HHHHHHHHHHHhhc
Q 001061 464 REEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYW---SGYYVSRPFFKAVDRVLEQTL-RATEMMVALLLGYC 539 (1167)
Q Consensus 464 ~~~~~~~~~~~~ge~~~~~~~~~P~~~GDffpYad~~~~yW---tGyyTSRp~~K~~~R~~e~~L-r~aE~L~sla~~~~ 539 (1167)
+++.. ..||+++||||.+.+ .+| +|||||||++|+++|++|++| |+||+|+++|...
T Consensus 291 ~~~~~---------------~~lp~~~GEl~~~~~---~~W~th~G~~tSr~~~K~~nR~~E~~L~~~aE~l~~la~~~- 351 (923)
T 2wyh_A 291 ADDLP---------------ENLSTVQGEITSQET---DGWYTLANTASARIYLKQANTRVSRQLENITEPLAAMAYEV- 351 (923)
T ss_dssp HHHSC---------------SCCCEEESCBSCTTS---CSSSSCGGGGGTTHHHHHHHHHHHHHHHHTHHHHHHHHHHH-
T ss_pred Hhhcc---------------ccCceecccccCccc---ccceecCCEeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 87531 369999999984322 335 499999999999999999999 7999999998653
Q ss_pred cccccccCChhHHHHHHHHHHHhhhhcccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCccc
Q 001061 540 QRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQF 619 (1167)
Q Consensus 540 ~~~~~~~~~~~~~~~L~~a~r~l~l~QHHDaItGTsk~~V~~Dy~~rL~~a~~~~~~vi~~al~~Ll~~~~~~~~~~~~~ 619 (1167)
+..|| .+.|++|||+|+++||||+||||++++|++||.+||.++.+.++.++..+++.|+......
T Consensus 352 ----g~~yp---~~~L~~~Wk~ll~~Q~HD~i~Gts~~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~~~------- 417 (923)
T 2wyh_A 352 ----TSTYP---HDQLRYAWKTLMQNHPHDSICGCSVDSVHREMMTRFEKAYEVGHYLAKEAAKQIADAIDTR------- 417 (923)
T ss_dssp ----HSCCC---HHHHHHHHHHHHTTCBHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCCT-------
T ss_pred ----CCCCc---hHHHHHHHHHHhccCCCcCcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-------
Confidence 23577 5689999999999999999999999999999999999999999999999999887542100
Q ss_pred cccccccccCCCCcceeeeccCCCcceEEEEcCCCcceeEEEEEEEec-------------------------CcEEEEe
Q 001061 620 EPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIVNR-------------------------PDITVLD 674 (1167)
Q Consensus 620 ~~~~~~~~~~~~~~~~~i~~~~~~~~~vvvfNpL~~~R~~vV~v~V~~-------------------------~~v~V~d 674 (1167)
...++...++|||||+|+|+++|+|+|.. +.+.|+|
T Consensus 418 -------------------~~~~~~~~vvvfN~l~~~r~~vV~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d 478 (923)
T 2wyh_A 418 -------------------DFPMDSQPFVLFNTSGHSKTSVAELSLTWKKYHFGQRFPKEVYQEAQEYLARLSQSFQIID 478 (923)
T ss_dssp -------------------TSCTTSEEEEEEECSSSCEEEEEEEEEEEEEEECTTSCHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred -------------------cCCCCceEEEEEcCCCceEeEEEEEEEEcccccccccccccccchhhhhhcccCCCEEEEC
Confidence 00123457999999999999999999873 6899999
Q ss_pred CCCeEEE-Eeecccccc-------CC--cccccCcEEEEEEEecCCCeeEEEEEEcCccccCCCCccceeccCCCCCCCC
Q 001061 675 SNWTCVQ-SQISPELRH-------GK--SKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLKYSSDNSFSCP 744 (1167)
Q Consensus 675 ~~G~~V~-~Qi~p~~~~-------~~--~~~~~~~~~L~F~a~vPpLG~~ty~I~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (1167)
.+|++|+ +|+++.+.. .. .......++|.|.|+||||||++|.|....... .....
T Consensus 479 ~~G~~v~~~qi~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~a~vP~lG~~~~~i~~~~~~~----~~~~~---------- 544 (923)
T 2wyh_A 479 TSGQVRPEAEILGTSIAFDYDLPKRSFREPYFAIKVRLRLPITLPAMSWKTLALKLGNETT----PSETV---------- 544 (923)
T ss_dssp TTCCBCTTCEEEEEEEEEEEECCSSSCCEEEEEEEEEEEEEEEECTTEEEEEEEEEEC----------CC----------
T ss_pred CCCCEeccEEEEeccccccccccccccccccceeeEEEEEEEEcCCcceEEEEEEECCCcc----ccccc----------
Confidence 9999999 999886510 00 001123468999999999999999997643210 00000
Q ss_pred CCCccccC-CCCceEEeeCeEEEEEEccCceEEEEEc-cCCcEEEeeeeeeeecc--CCCCceeeccCCCCcccc--cCC
Q 001061 745 TPYACSKI-EGDVADIRNRHQILSFDVRHGLLQKISH-INGSQNVVEEEIDMYSS--QGSGAYLFMPNGDAHPIT--EAG 818 (1167)
Q Consensus 745 ~~~~~~~~-~~~~~~IEN~~~~l~fd~~tGlL~si~~-k~g~~~~v~~~f~~Y~s--~~SGAYiF~P~g~~~~~~--~~~ 818 (1167)
.. ..+...|||++++|+||+ +|.| +|.+ ++|++.. +|.+|.+ +.+|||+|+|++.+.++. ...
T Consensus 545 ------~~~~~~~~~leN~~~~v~~d~-~G~l-si~dk~~gr~~~---~~~~y~d~~d~~day~f~p~~~~~~~~~~~~~ 613 (923)
T 2wyh_A 545 ------SLYDDSNQCLENGFLKVMIQT-DGRL-TITDKQSGLIYQ---DLLRFEDCGDIGNEYISRQPNHDQPFYADQGT 613 (923)
T ss_dssp ------CSEETTTTEEECSSEEEEECT-TSCE-EEEETTTCCEEE---EESEEEEEECCSCSSCCCCCTTCCCEEGGGSE
T ss_pred ------ccccCCCceEecCeEEEEEeC-CCCE-EEEECCCCeEEE---EEEEEeecCCCCCeeEEEcCCCCceeeccCCC
Confidence 00 123478999999999997 4998 6774 5787764 7888864 568999999998776653 222
Q ss_pred cEEEE-EeCCceEEEEEeecc-----------------------cccC-c-----cEEEEEEEeeCCCccceeEEEEEEE
Q 001061 819 GLMVI-SKGPLMEEAYSYPRT-----------------------AWER-S-----PISHSTRLYNGNNMIQEFLIEKEYH 868 (1167)
Q Consensus 819 ~~~~v-~~Gpl~sev~~~~~~-----------------------~~~~-s-----~i~~~vrLy~~~~~~~~~~iEi~~~ 868 (1167)
..+.+ .+||++++|++.+.. ..+. + +++|+++||++.+ .|||++.
T Consensus 614 ~~i~v~~~gpl~~~v~~~~~~~vP~~~~~~L~~~~~~~~~~~~r~~~~s~~~~~~~i~q~i~L~~~~~-----~ie~~~~ 688 (923)
T 2wyh_A 614 IKLNIISNTAQVAELEIQQTFAIPISADKLLQAEMEAVIDITERQARRSQEKAELTLTTLIRMEKNNP-----RLQFTTR 688 (923)
T ss_dssp EEEEEEEECSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCS-----CEEEEEE
T ss_pred ceEEEEEcCCCEEEEEEEEEecCCccchhhhccccccccchhhhhhcccccccceEEEEEEEEeCCCc-----eEEEEEE
Confidence 34444 459999999987521 1222 2 5999999999987 6999999
Q ss_pred eeeccCCCCCcEEEEEEEeecCCCceEEEccCCccccccCccCCC---CCCcceEeccceEEEecCCCCeeEEeecCCcc
Q 001061 869 VELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKI---PLQGNYYPMPALAFMQGSNGQRFSVHSRQSLG 945 (1167)
Q Consensus 869 Vd~~~~~~~n~El~~rf~T~I~s~~~fYTD~NG~q~ikR~~~~~~---pv~~NyYP~~s~a~I~D~~~~rltvltdrs~G 945 (1167)
||+++ .+++|+++|+|+|+++. +|+| |||++++|++..+. ..++|||||.++|+|+|.+ .++||+||+++|
T Consensus 689 vd~~~---~~~~l~v~fpt~i~s~~-~~~d-~~fg~i~R~~~~~~~~w~~a~~~~p~~~~v~l~d~~-~gvavlnd~~~g 762 (923)
T 2wyh_A 689 FDNQM---TNHRLRVLFPTHLKTDH-HLAD-SIFETVKRPNHPDATFWKNPSNPQHQECFVSLFDGE-NGVTIGNYGLNE 762 (923)
T ss_dssp EEECC---CSEEEEEEEECCCCCSE-EEEE-ETTEEEEEESSCCTTTCCCSCCCEECSSEEEEECSS-EEEEEEESSCCE
T ss_pred ECCcc---CCEEEEEEeccccCCCC-EEEe-cCceEEEccCCCCCCCcccccceEeeeeEEEEECCC-CcEEEEeCCccc
Confidence 99975 68999999999999986 5557 99999999976543 3589999999999999985 899999999999
Q ss_pred eeec-cCCeEEEEEcccc--ccCCCCCCCcCccCCc-ceeEEEEEEEecccccCccCCCCCcccCcchhhhhcccccccc
Q 001061 946 VASL-KDGWLEIMLDRRL--SRDDGRGLGQGVLDNR-AMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYP 1021 (1167)
Q Consensus 946 ~sSl-~~G~lElmL~RRl--~~DD~rGlge~l~Dn~-~~~~~f~llle~~~~~~~~~~~~~~~~~psl~sh~~~~~l~~P 1021 (1167)
++++ .+|+|||||+|+. +.| +|+ .|..+.. ...+.|.+-+...... - .. .....+..++.|
T Consensus 763 ~~~~~~~~~i~LtLlRs~~~lg~--~G~-~p~p~a~~~G~h~f~yal~~~~g~-~----------~~-~~~~~a~~~~~P 827 (923)
T 2wyh_A 763 YEILPDTNTIAITLLRSVGEMGD--WGY-FPTPEAQCLGKHSLSYSFESITKQ-T----------QF-ASYWRAQEGQVP 827 (923)
T ss_dssp EEEETTTTEEEEEEEEECSBCCT--TSC-CBCGGGGCCEEEEEEEEEEEEETT-T----------HH-HHHHHHHHTTSC
T ss_pred eEEecCCCeEEEEEecccccccc--CCc-ccCchhHhceEEEEEEEEcccCCc-h----------hH-HHHHHHHHHhCC
Confidence 9998 4899999999998 555 776 5544433 2345565544322110 0 00 112345679999
Q ss_pred ceeeeccCCCCCcCCCCCCCcCCCCCCCCCceeEEeeecCCCCCCCCCCCCccceeEEEEeeccCcccccCCCCcccccc
Q 001061 1022 LHAFISKKPQELSVQPPPRSFSPLAGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVV 1101 (1167)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~fs~l~~~LP~dvHLltLr~~~~~~~~~~~~~~~r~~liL~r~~~d~~~~~~~~~~c~~~~ 1101 (1167)
+.++...... .....+++.+.-. |.+|+|.+|+...+. -.+|||..+.. +...|
T Consensus 828 l~~~~~~~~~----~~~~~~~s~l~~~-~~~v~l~alK~aed~-----------~~~ilRl~n~~------g~~~~---- 881 (923)
T 2wyh_A 828 VITTQTNQHE----GTLAAEYSYLTGT-NDQVALTAFKRRLAD-----------NALITRSYNLS------NDKTC---- 881 (923)
T ss_dssp CEEEECCSCC----CSBCSEEESCBCC-CTTEEEEEEEECTTT-----------CCEEEEEEESC------SSCCE----
T ss_pred HhheecCccc----CcCCccccceecC-CCCEEEEEEEEccCC-----------CcEEEEEecCC------CCcce----
Confidence 9877654321 1122344444332 779999999976431 13577764421 11011
Q ss_pred ccccchhhhcccCccceEEEccccCccccccccCCCCcccCCCCCCceEeccceeeEEEEEEe
Q 001061 1102 DEPLNLFSMFKGLAILNAKATSLNLLNDDIGMLGYPEQLEDVSQDGQVTIAPMEIQAYKLEMR 1164 (1167)
Q Consensus 1102 ~~~v~l~~LF~~~~v~~~~etsLt~~~~~~~~~~~~~~~~~~~~~~~v~L~PMEIrTf~i~~~ 1164 (1167)
.+.+ .+.+.++.++.|..-. .+.+ . .+.|.|-||+||+|+++
T Consensus 882 --~l~~-----~~~~~~~~~~~llE~~--~~~~----------~--~~~l~p~ei~T~~l~~~ 923 (923)
T 2wyh_A 882 --DFSL-----SLPNYNAKVTNLLEKD--SKQS----------T--PSQLGKAEILTLAWKKQ 923 (923)
T ss_dssp --ECCC-----BCTTEEEEEECTTCCB--CSCC----------C--CSEECTTCEEEEEEEEC
T ss_pred --EEEe-----ccccceEEEeeccCcc--cccc----------c--cceEcCcceEEEEEEeC
Confidence 1221 2345567777664311 1000 0 17899999999999874
No 3
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=100.00 E-value=2e-107 Score=1042.34 Aligned_cols=671 Identities=17% Similarity=0.201 Sum_probs=516.1
Q ss_pred cceEEEEeeccccCccccccHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEe-chHHHHHHHHhcCHHHHHHHHHHHHCCc
Q 001061 155 EKLKIFVVPHSHNDPGWKLTVDEYYDRQSRHILDTIVETLSKDARRKFIWE-EMSYLERWWRDSSESQRASFTNLVKNGQ 233 (1167)
Q Consensus 155 ~~l~V~vVpHSH~D~GWl~T~deyy~~~v~~Ild~vv~~L~~dp~~kFi~~-Eis~f~~Ww~~~~p~~k~~vk~LV~~Gq 233 (1167)
++.+||+|||||+|+|||||++||+.. +.++|++|+++|++||+++|+|. +..++.+||.+++|+.+++||+||++||
T Consensus 5 ~~~~v~~v~HsH~D~~Wl~t~~e~~~~-~~~~~~~~l~~l~~~p~~~f~~~~~q~~~~~~~~~~~p~~~~~vk~lv~~Gr 83 (899)
T 3lvt_A 5 TKKKVYIVSHSHWDREWYLPYEEHHMR-LIELVDNVLDLIENDPEFNSFHLDGQTIILDDYLQVRPEKKEAVKKAVQAGK 83 (899)
T ss_dssp CCEEEEEEEEECC----CCCHHHHHHH-HHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHHHCGGGHHHHHHHHHTTS
T ss_pred ccceEEEECCCCCChHhcCcHHHHHHH-HHHHHHHHHHHHHhCCCceEEEEcccHHHHHHHHhhCHHHHHHHHHHHHcCC
Confidence 467999999999999999999999866 55679999999999999999996 3456778999999999999999999999
Q ss_pred EEEecceeccccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCchhHHHHHHHcCCceeEeeccc----hhh
Q 001061 234 LEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTH----YEL 309 (1167)
Q Consensus 234 LEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~vi~Ri~----~~~ 309 (1167)
|| |||||||+||+++||||+||||++||+|+++ ||+.|++||+|||||||++||+||+++||++++|+|++ +..
T Consensus 84 ~e-igg~~v~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~~D~FG~s~~lp~i~~~~Gi~~~~~~Rg~~~~~~~~ 161 (899)
T 3lvt_A 84 LK-IGPFYILQDDFLISSESNVRNMLIGHLESQK-WGAPVQLGYFPDTFGNMGQTPQMMQLANLPAAAFGRGVKPIGFDN 161 (899)
T ss_dssp EE-CCSBSSCCCGGGSCHHHHHHHHHHHHHHHHH-HTCCCCCEEESCCCT---THHHHHHTTTCCEEEEC----------
T ss_pred EE-ECchhccccccCCCHHHHHHHHHHHHHHHHH-cCCCCceeEeCCCCCCchHHHHHHHHcCCCeEEEecccccccccc
Confidence 99 7999999999999999999999999999999 99999999999999999999999999999999999986 333
Q ss_pred HHHH--hcCCcceEEEEecCCCCCCCceEEEecCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCCHhH
Q 001061 310 KKEL--ALHQNLEYIWRQSWDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQEN 387 (1167)
Q Consensus 310 K~~~--~~~k~~eF~Wr~s~~~~~gs~I~th~~p~y~Y~~p~tcgp~p~ic~~fDf~r~~g~~~~~cpw~~~p~~i~~~N 387 (1167)
++.. -..+.++|+|+ ++|||+||||+||+ +|+ || |. .+.+.+|
T Consensus 162 ~k~~~~~~~p~~~F~W~----g~dGs~vlt~~~~~-~Y~----~g-----------------------~~---~p~~~~~ 206 (899)
T 3lvt_A 162 QVLESDYSSQYSEMWWE----GPDQTKIFGLLFAN-WYS----NG-----------------------NE---IPSEKEA 206 (899)
T ss_dssp -----------CEEEEE----CTTSCEEEEEECCC-C-------------------------------CC---SCSSHHH
T ss_pred cccccccCCCCceEEEE----CCCCCeEEEEECCC-cCc----Cc-----------------------cC---CCCcHHH
Confidence 2211 01256899999 58899999999985 563 12 11 1235678
Q ss_pred HHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCchhHHHHHHHhHHHHHHHHhcCCCCCceEEECCHHHHHHHHHHHh
Q 001061 388 VQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEA 467 (1167)
Q Consensus 388 v~~ra~~ll~~~~k~s~~y~tn~lL~p~GdDf~y~~~~~a~~~f~n~~kli~~iN~~~~~~~~i~~sTl~dYf~al~~~~ 467 (1167)
++.+.++.++..++ .++++++|+|+|+||+.. ++||+++|+++|+... .+++++||++|||++|+++.
T Consensus 207 ~~~~~~~~~~~~~~---~~~t~~il~~~G~D~~p~--------~~~l~~~i~~~n~~~p-~~~~~~st~~~yf~~l~~~~ 274 (899)
T 3lvt_A 207 AIAFWKQKLADVER---YASTNHLLMMNGVDHQPV--------QRDITKAIALANELFP-EYEFIHSNFDDYLKAVQEEL 274 (899)
T ss_dssp HHHHHHHHHHHHHH---HCSSSEEEEEEEEC--------------CHHHHHHHHHHHCS-SEEEEECCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHh---hcCCCeEEEeecCCCCch--------HHHHHHHHHHHHhcCC-CceEEEcCHHHHHHHHHHhc
Confidence 87766665554443 458999999999998653 3799999999997432 68899999999999998742
Q ss_pred hcccCCCCCccCCCCccCCCceeccccc-ccccCCccce-eeeecchhhhhhhHHHHHHHH-HHHHHHHHHHhhcccccc
Q 001061 468 DRINYSRPGEIGSGQVEGFPSLSGDFFT-YADRQQDYWS-GYYVSRPFFKAVDRVLEQTLR-ATEMMVALLLGYCQRAQC 544 (1167)
Q Consensus 468 ~~~~~~~~ge~~~~~~~~~P~~~GDffp-Yad~~~~yWt-GyyTSRp~~K~~~R~~e~~Lr-~aE~L~sla~~~~~~~~~ 544 (1167)
...||+++||||+ |.+. .||+ |||||||++|+++|++|++|+ +||+|+++|... +
T Consensus 275 ---------------~~~lp~~~GEl~~~~~~G--~yt~~~~~sSr~~~K~~nR~~E~~L~~~aE~l~~la~~~-----g 332 (899)
T 3lvt_A 275 ---------------PEDLGTVTGELTSQETDG--WYTLANTSSARVYLKQWNTKVQRQLENIAEPLAAMAYEV-----T 332 (899)
T ss_dssp ---------------C--CCEEECCC-------------CGGGGBTHHHHHHHHHHHHHHHTTHHHHHHHHHHH-----H
T ss_pred ---------------cccCCcccccccccccCc--eEEECCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----C
Confidence 1369999999995 3222 2443 555699999999999999999 699999998643 2
Q ss_pred ccCChhHHHHHHHHHHHhhhhcccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCcccccccc
Q 001061 545 EKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQV 624 (1167)
Q Consensus 545 ~~~~~~~~~~L~~a~r~l~l~QHHDaItGTsk~~V~~Dy~~rL~~a~~~~~~vi~~al~~Ll~~~~~~~~~~~~~~~~~~ 624 (1167)
..|| .+.|++||++|+++||||+|||||+++|++||.+||.++.+.|+.++..++..|+......
T Consensus 333 ~~yp---~~~l~~~Wk~ll~~Q~HD~i~Gtsi~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~~~------------ 397 (899)
T 3lvt_A 333 GDYP---HDQFDYAWKTLLQNHPHDSICGCSVDEVHRGMMTRFENANDVGHFLADEATRQLTEAIDTS------------ 397 (899)
T ss_dssp SCCC---HHHHHHHHHHHHTTCSTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCCT------------
T ss_pred CCCc---HHHHHHHHHHHhccCCCCccCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc------------
Confidence 4577 5789999999999999999999999999999999999999999999999999987643100
Q ss_pred ccccCCCCcceeeeccCCCcceEEEEcCCCcceeEEEEEEEec----------------------CcEEEEeCCCeEEEE
Q 001061 625 RSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTREEIVMVIVNR----------------------PDITVLDSNWTCVQS 682 (1167)
Q Consensus 625 ~~~~~~~~~~~~i~~~~~~~~~vvvfNpL~~~R~~vV~v~V~~----------------------~~v~V~d~~G~~V~~ 682 (1167)
... .+...|+|||||+|+|+++|+|+|.. +.+.|.|++|++|++
T Consensus 398 -------------~~~-~~~~~v~vfN~l~~~r~~~V~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~ 463 (899)
T 3lvt_A 398 -------------VFP-EKAHPFVLFNTSGYQKTEVVTVEVEIERLPFYTGKPEDLYHELKQKATPDYQVIDPTGKAVAS 463 (899)
T ss_dssp -------------TSC-TTCEEEEEEECSSSCEEEEEEEEEEEEEEEGGGSCHHHHHHHHHHSCCCCEEEECSSSCEECC
T ss_pred -------------cCC-CCCCEEEEEeCCCceeeeEEEEEEEccccccccccchhhhhhhccccCCceEEECCCCCEEeE
Confidence 000 13468999999999999999999975 679999999999999
Q ss_pred eeccccccC----C-----cccccCcEEEEEEE-ecCCCeeEEEEEEcCccccCCCCccceeccCCCCCCCCCCCccccC
Q 001061 683 QISPELRHG----K-----SKIFTGRHRLHWKA-TIPALGLQVYYIANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSKI 752 (1167)
Q Consensus 683 Qi~p~~~~~----~-----~~~~~~~~~L~F~a-~vPpLG~~ty~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1167)
|+++.+... . .......++|.|.| +||||||++|.|....... ... .. ..
T Consensus 464 qv~~~~~~~~~~l~~~~~~~~~~~~~~~l~f~a~~vPalGy~~~~i~~~~~~~----~~~-------------~~---~~ 523 (899)
T 3lvt_A 464 RIVKEDVRFGYDLPKDAFRQPYMAKYLTVELSVKEMAPFSWDSFALIQGETKA----FEG-------------SL---LA 523 (899)
T ss_dssp EEEEEEEEEEECCC-----CEEEEEEEEEEEEEEEECTTEEEEEEEEESCCCC----CCS-------------CC---SE
T ss_pred EEeeccccccccccccccccccccceEEEEEEecCCCCCCCEEEEEEecCccc----ccc-------------cc---cc
Confidence 999865310 0 00112356899988 9999999999998653210 000 00 00
Q ss_pred CCCceEEeeCeEEEEEEccCceEEEEEc-cCCcEEEeeeeeeeecc--CCCCceeeccCCCCcccccCC--cE-EEEEeC
Q 001061 753 EGDVADIRNRHQILSFDVRHGLLQKISH-INGSQNVVEEEIDMYSS--QGSGAYLFMPNGDAHPITEAG--GL-MVISKG 826 (1167)
Q Consensus 753 ~~~~~~IEN~~~~l~fd~~tGlL~si~~-k~g~~~~v~~~f~~Y~s--~~SGAYiF~P~g~~~~~~~~~--~~-~~v~~G 826 (1167)
..+...|||++++|+||+ +|.| +|.+ ++|++.. ++.+|.+ +.+|+|+|.|+....++.... .. .++++|
T Consensus 524 ~~~~~~leN~~~~v~~d~-~G~l-sl~Dk~~gre~~---~~~~~~d~gd~g~~Y~~~p~~~d~~~~~~~~~~~v~v~e~g 598 (899)
T 3lvt_A 524 QPATNEMENEFIQVKIEN-NGSL-TIADKKTGETFS---KLLTFEDTGDIGNEYIFFKPTEDQGITTENVTAEITNKENS 598 (899)
T ss_dssp ETTTTEEECSSEEEEECT-TSCE-EEEETTTCCEEE---EETEEEEEECCSBTTBCCCCTTCCCEESTTCCCEEEEEEEC
T ss_pred cccCcEEecCcEEEEEcC-CCcE-EEEECCCCeEEE---EEEEEecCCCCCCceeecCCcCCceeeccCCCceEEEEEcC
Confidence 113578999999999997 8999 6874 5788663 4666743 468999999987665654322 33 445689
Q ss_pred CceEEEEEeecc-----------------------cccCc------cEEEEEEEeeCCCccceeEEEEEEEeeeccCCCC
Q 001061 827 PLMEEAYSYPRT-----------------------AWERS------PISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFN 877 (1167)
Q Consensus 827 pl~sev~~~~~~-----------------------~~~~s------~i~~~vrLy~~~~~~~~~~iEi~~~Vd~~~~~~~ 877 (1167)
|++++|++...- ..+++ +++|+|+||++++ +|||++.|||. ..
T Consensus 599 pl~~~v~v~~~~~~P~~~~~~~~~~~~~~~~~~~r~~~~S~~~~~~~i~q~i~L~~~~~-----~id~~~~Vdw~---~~ 670 (899)
T 3lvt_A 599 PVKASYQIKQTVMLPVAADERLEEEQKAVREFRERLAQRSTTLRPFEITTMVTMIKESN-----QLFFETTINNQ---IK 670 (899)
T ss_dssp SSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCC-----CEEEEEEEEEC---CC
T ss_pred CCEEEEEEEEEEccccchhhhhcccccccccchhhhhcccccccceEEEEEEEEeCCCC-----EEEEEEEECCC---cC
Confidence 999999865421 11234 7999999999987 69999999985 36
Q ss_pred CcEEEEEEEeecCCCceEEEccCCccccccCccCCC--CCCcceEeccceEEEecCCCCeeEEeecCCcceeeccCCeEE
Q 001061 878 DRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKI--PLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLE 955 (1167)
Q Consensus 878 n~El~~rf~T~I~s~~~fYTD~NG~q~ikR~~~~~~--pv~~NyYP~~s~a~I~D~~~~rltvltdrs~G~sSl~~G~lE 955 (1167)
+|+|+++|+++|.+...+|+ .+|++++|++.... ..++|+||+.++|.|.|.+ .+++|+||+.+|.+++.+|+|+
T Consensus 671 ~~~Lrv~Fp~~i~s~~~~~d--~~fG~i~Rpt~~~t~We~a~~e~~~~~~vdlsd~~-~Gvavlnd~~~gy~v~~d~~i~ 747 (899)
T 3lvt_A 671 DHRLRVLFPTGMVTETHEAD--SIYEVVTRPNQVSDTWENPTNPQHQQAFVNVHDQN-KGVTIFNEGLNEYEVLADGTIA 747 (899)
T ss_dssp SEEEEEEECCSCCCSEEEEE--CSSSEEEEEC-------CCCCCEECSSEEEEECSS-CEEEEEESSCCEEEECTTCCEE
T ss_pred CEEEEEECCCCCCcCceEEe--ccceEEECCCCCCccccCCCcceeeeeEEEEecCC-ceEEEEeCCCcceeEcCCCEEE
Confidence 89999999999999877776 56779999975432 3578999999999999984 8999999999999988889999
Q ss_pred EEEcccc
Q 001061 956 IMLDRRL 962 (1167)
Q Consensus 956 lmL~RRl 962 (1167)
|||+|+.
T Consensus 748 LTLlRs~ 754 (899)
T 3lvt_A 748 VTLIRCV 754 (899)
T ss_dssp EEEEEEC
T ss_pred EEEeccc
Confidence 9999996
No 4
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1
Probab=100.00 E-value=2.6e-71 Score=622.10 Aligned_cols=281 Identities=35% Similarity=0.710 Sum_probs=256.4
Q ss_pred cceeeeecCCCCCCcceEEEEeeccccCccccccHHHHHHH--------HHHHHHHHHHHHHhcCCCCcEEEechHHHHH
Q 001061 141 QGWDVKYRGDEWDHEKLKIFVVPHSHNDPGWKLTVDEYYDR--------QSRHILDTIVETLSKDARRKFIWEEMSYLER 212 (1167)
Q Consensus 141 qg~~~~~~~~~~~~~~l~V~vVpHSH~D~GWl~T~deyy~~--------~v~~Ild~vv~~L~~dp~~kFi~~Eis~f~~ 212 (1167)
|||+. |++|++++++||+|||||+|+||+||+++||.. .++++|++|++.|+++|++||+|+|+++|++
T Consensus 1 ~~~~~---~~~~~~~~~~v~~v~HsH~D~gWl~t~~e~~~~~~~~i~~~~~~~~~~~vl~~l~~~p~~~F~~~e~~~~~~ 77 (298)
T 1o7d_A 1 AGYKT---CPKVKPDMLNVHLVPHTHDDVGWLKTVDQYFYGIYNNIQPAGVQYILDSVISSLLANPTRRFIYVEIAFFSR 77 (298)
T ss_dssp -CCTT---CCCCCSSSEEEEEEEBCBCCSSSSSCHHHHHHTCCTTTCCCCHHHHHHHHHHHHHHCTTCCEEECCHHHHHH
T ss_pred CCCcC---CCCCCCCceEEEEeCCCCCcccccccHHHhhccccchhHHHHHHHHHHHHHHHHHHCCCCeEEEecchHhHH
Confidence 56766 899999999999999999999999999999973 5778999999999999999999999999999
Q ss_pred HHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHHHHhcCCC--CCcceecCCCCCchhHHH
Q 001061 213 WWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFI--PKNSWAIDPFGYSATMAY 290 (1167)
Q Consensus 213 Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~--p~~gW~iDpFGhS~~~p~ 290 (1167)
||++++|+.+++||+||++||||||||||||+|||++||||+||||++||+|++++||+. |++||+|||||||++||+
T Consensus 78 w~~~~~Pe~~~~vk~lV~~Grle~vgG~wve~D~~~~~~eslirQl~~G~~~~~~~fG~~~~~~~~W~pD~FG~s~~lP~ 157 (298)
T 1o7d_A 78 WWRQQTNATQKIVRELVRQGRLEFANGGWVMNDEATTHYGAIIDQMTLGLRFLEETFGSDGRPRVAWHIDPFGHSREQAS 157 (298)
T ss_dssp HHHTSCHHHHHHHHHHHHTTSEEESSCSSSCBCSSSCCHHHHHHHHHHHHHHHHHHHGGGGCCSEEEESSSSSCCHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHCCCEEEECceeeccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCceeEeCCCCCccHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999997 999999999999999999
Q ss_pred HHHHcCCceeEeeccchhhHHHHhcCCcceEEEEecCCCC-CCCceEEEecCCcccCCCCCCCCCCcccccccccccCCc
Q 001061 291 LLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTE-ETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGF 369 (1167)
Q Consensus 291 Ll~~~G~~~~vi~Ri~~~~K~~~~~~k~~eF~Wr~s~~~~-~gs~I~th~~p~y~Y~~p~tcgp~p~ic~~fDf~r~~g~ 369 (1167)
||+++||++++++|++|++|+.+...+.+||+|+++++.. |||+||||+|| ++|+ |++++| ||+
T Consensus 158 il~~~Gi~~~~~~R~~~~~~~~~~~~~~~eF~W~g~~~~~~dgs~i~t~~~~-~~Y~------~~~g~~--fd~------ 222 (298)
T 1o7d_A 158 LFAQMGFDGFFFGRLDYQDKKVRKKTLQMEQVWRASTSLKPPTADLFTSVLP-NMYN------PPEGLC--WDM------ 222 (298)
T ss_dssp HHHHHTCCEEEESCCCHHHHHHHHHTTCSEEEEECCSSSCTTTTEEEEEECS-STTS------CCTTCC--CST------
T ss_pred HHHHcCCCeEEEEecccccccccccCCCceEEEECCCCCCCCCCeEEEEEeC-CCCC------CCCCcc--ccc------
Confidence 9999999999999999999988777889999999988776 99999999999 4773 567899 886
Q ss_pred ccccCCCCCCCC----CCCHhHHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCchhHHHHHHHhHHHHHHHHhcCC
Q 001061 370 FYEACPWRQNPV----ETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNP 445 (1167)
Q Consensus 370 ~~~~cpw~~~p~----~i~~~Nv~~ra~~ll~~~~k~s~~y~tn~lL~p~GdDf~y~~~~~a~~~f~n~~kli~~iN~~~ 445 (1167)
.| .++|+ .++++||++|++.+++++++++++|+||+||+|+|+||+|.+ |+.||+||++||+|+|+++
T Consensus 223 ---~~--~~~p~~~~~~~~~~nv~~r~~~~~~~~~~~a~~~~t~~vl~p~G~Df~~~~---a~~~f~n~~~li~~iN~~~ 294 (298)
T 1o7d_A 223 ---LC--ADKPVVEDTRSPEYNAKELVRYFLKLATDQGKLYRTKHTVMTMGSDFQYEN---ANTWFKNLDKLIQLVNAQQ 294 (298)
T ss_dssp ---TC--CCCCCCCCTTSTTCCHHHHHHHHHHHHHHHHTTSSSSEEEEEECCBTCCTT---HHHHHHHHHHHHHHHHC--
T ss_pred ---cc--CCcCccCCccchHHHHHHHHHHHHHHHHHHHhhcCCCcEEeccCCCCCccc---hhHHHHHHHHHHHHHhhcC
Confidence 35 23332 356899999999999999999999999999999999999976 7778999999999999987
Q ss_pred CC
Q 001061 446 SL 447 (1167)
Q Consensus 446 ~~ 447 (1167)
++
T Consensus 295 ~~ 296 (298)
T 1o7d_A 295 RA 296 (298)
T ss_dssp --
T ss_pred cc
Confidence 54
No 5
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=100.00 E-value=2.1e-56 Score=492.11 Aligned_cols=250 Identities=25% Similarity=0.379 Sum_probs=217.4
Q ss_pred ceEEeeCeEEEEEEccCceEEEEE-ccCCcEEEeeeeeeeeccC--------CCCceeeccCCCCcccccCCcEEEEEeC
Q 001061 756 VADIRNRHQILSFDVRHGLLQKIS-HINGSQNVVEEEIDMYSSQ--------GSGAYLFMPNGDAHPITEAGGLMVISKG 826 (1167)
Q Consensus 756 ~~~IEN~~~~l~fd~~tGlL~si~-~k~g~~~~v~~~f~~Y~s~--------~SGAYiF~P~g~~~~~~~~~~~~~v~~G 826 (1167)
++.|+|++++|+||+.||+|++|+ +++|.+..+.++|.+|.+. .||||+|+|++++.+.......+.+++|
T Consensus 2 ~~~i~n~~~~l~fd~~tG~L~si~~~~~g~~~~v~q~f~~Y~s~~g~~~~~~~SGAYiFrP~g~~~~~~~~~~~~~v~~G 81 (282)
T 1o7d_D 2 DLVIQNEYLRARFDPNTGLLMELENLEQNLLLPVRQAFYWYNASTGNNLSSQASGAYIFRPNQNKPLFVSHWAQTHLVKA 81 (282)
T ss_dssp CCEEECSSEEEEECTTTCSEEEEEEC---CEEECEEEEEEEEBCCCBTTBSCCCCSSCCCBSSSSCEESCSCCEEEEEEC
T ss_pred cEEEcCceEEEEECCCCCcEEEEEEcCCCeEEEEeEEEEEEecccCCCCCCCCCceEEecCCCCCCcccCCCcEEEEEEC
Confidence 368999999999999899999999 4679999999999999765 7999999999986554445567889999
Q ss_pred CceEEEEEeecccccCccEEEEEEEeeCCCccceeEEEEEEEeeeccC-CCCCcEEEEEEEeecCCCceEEEccCCcccc
Q 001061 827 PLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSH-NFNDRELIVRYKTDIDNKRIFYSDLNGFQMS 905 (1167)
Q Consensus 827 pl~sev~~~~~~~~~~s~i~~~vrLy~~~~~~~~~~iEi~~~Vd~~~~-~~~n~El~~rf~T~I~s~~~fYTD~NG~q~i 905 (1167)
||++||++.+. .|++|++|||++.. .||++|+|+++|. +..|+|++|||+|+|+|+++||||+||+||+
T Consensus 82 ~lv~eV~~~~~-----~~~sq~~Rly~~~~-----~vE~e~~Vgpipi~d~~~kEiv~r~~T~i~s~~~FYTDsNG~e~~ 151 (282)
T 1o7d_D 82 SLVQEVHQNFS-----AWCSQVVRLYPRQR-----HLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREIL 151 (282)
T ss_dssp SSCEEEEEEEE-----TTEEEEEEECTTCS-----SEEEEEEECCCCCTTSCCEEEEEEEECCCCCTTEEEEESTTSSEE
T ss_pred CEEEEEEEEEC-----CcEEEEEEEecCCc-----eEEEEEEEccccccCCCCcEEEEEEEeeeccCCeEEECCCCceee
Confidence 99999999863 37999999999875 6999999999984 6789999999999999999999999999999
Q ss_pred ccCccC--------CCCCCcceEeccceEEEecCCCCeeEEeecCCcceeeccCCeEEEEEccccccCCCCCCCcCccCC
Q 001061 906 RRETYD--------KIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRDDGRGLGQGVLDN 977 (1167)
Q Consensus 906 kR~~~~--------~~pv~~NyYP~~s~a~I~D~~~~rltvltdrs~G~sSl~~G~lElmL~RRl~~DD~rGlge~l~Dn 977 (1167)
||.+.. ++|++||||||+++|||+|++ .|||||+|||+||||+++|+|||||||||++||+|||||||+|+
T Consensus 152 kR~~~~r~~~~~~~~~pv~gNYYPv~s~~~IqD~~-~rltvl~drs~G~sSl~~G~lElMlhRRl~~DD~rGvge~l~d~ 230 (282)
T 1o7d_D 152 ERRRNYRPTWKLNQTEPVAGNYYPVNSRIYITDGN-MQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDARGVGEPLNKE 230 (282)
T ss_dssp EEETTCCSSSCCCCSCTTGGGCEEESSEEEEECSS-EEEEEEESSCEEECCSSTTEEEEEEEEECSSCCSSSCCSCSCCC
T ss_pred EEEeccccccccccccCcccceeeeeeEEEEEcCC-eEEEEEecccccccccCCCeEEEEEeeecccccccccccccccc
Confidence 997643 699999999999999999986 89999999999999999999999999999999999999999998
Q ss_pred ---cceeEEEEEEEecccccCccCCCCCcccCcchhhhhccccccccceeeeccC
Q 001061 978 ---RAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKK 1029 (1167)
Q Consensus 978 ---~~~~~~f~llle~~~~~~~~~~~~~~~~~psl~sh~~~~~l~~P~~~~~~~~ 1029 (1167)
.++..+++|+++....+ ..+.|..++++.+|+++|+++.
T Consensus 231 ~~gl~v~g~~~l~l~~~~~~-------------~~~~r~~~~~~~~p~~~~fs~~ 272 (282)
T 1o7d_D 231 GSGLWVRGRHLVLLDKKETA-------------AARHRLQAEMEVLAPQVVLAQG 272 (282)
T ss_dssp GGGGSEEEEEEEEEEEHHHH-------------HHHHHHHHHHHHSCCEEEEEEC
T ss_pred CCCeEEEEEEEEEEeCcccc-------------hhhhhHHHHhhhCchhhheecC
Confidence 46778899999864321 1234566788999999988764
No 6
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6
Probab=99.95 E-value=1.1e-27 Score=246.19 Aligned_cols=148 Identities=24% Similarity=0.412 Sum_probs=122.1
Q ss_pred HHHHHHHhhhhcccCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCccccccccccccCCCCcc
Q 001061 555 LTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVH 634 (1167)
Q Consensus 555 L~~a~r~l~l~QHHDaItGTsk~~V~~Dy~~rL~~a~~~~~~vi~~al~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (1167)
|++|||+|+++||||+||||++++|++||.+||.+|++.++.++..+++.|+..+. .|+.|.. .+.+.||.+
T Consensus 3 L~~~~k~l~~~QhHDaItGts~~~V~~Dy~~rl~~~~~~~~~l~~~~l~~L~~~~~-------~~~~~~~-ln~~~~~~~ 74 (159)
T 1o7d_C 3 SAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLSEGWRPCEVLMSNALAHLSGLKE-------DFAFCRK-LNISICPLT 74 (159)
T ss_dssp SHHHHHHHHHTTBTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS-------CEECCTT-GGGTCCHHH
T ss_pred HHHHHHHHhCcccCCcCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-------ccccccc-cccccCccc
Confidence 78899999999999999999999999999999999999999999999999875321 2222221 122233321
Q ss_pred eeeeccCCCcceEEEEcCCCcceeEEEEEEEecCcEEEEeCCCeEEEEeeccccccCCcccccCcEEEEEEEecCCCeeE
Q 001061 635 KVINVHEGTSQSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGLQ 714 (1167)
Q Consensus 635 ~~i~~~~~~~~~vvvfNpL~~~R~~vV~v~V~~~~v~V~d~~G~~V~~Qi~p~~~~~~~~~~~~~~~L~F~a~vPpLG~~ 714 (1167)
. .++...|+|||||+|+|+++|+++|+.+.+.|+|.+|++|++|+.|.+.. ..++|.|.|+||||||+
T Consensus 75 ~-----~~~~~~vvvfN~l~~~r~~~V~v~v~~~~~~v~d~~G~~v~~qi~~~~~~-------~~~~l~f~a~vP~lG~~ 142 (159)
T 1o7d_C 75 Q-----TAERFQVIVYNPLGRKVDWMVRLPVSKHVYLVKDPGGKIVPSDVVTIPSS-------DSQELLFSALVPAVGFS 142 (159)
T ss_dssp H-----HCSEEEEEEEECSSSCEEEEEEEEECSSCEEEECSSSCEECCEEEEETTT-------TEEEEEEEEEECTTEEE
T ss_pred c-----CCccEEEEEECCCCceEeEEEEEEEcCCcEEEEcCCCCEeeeEEEeccCC-------CceEEEEEeecCCceeE
Confidence 1 13456899999999999999999999999999999999999999987643 23589999999999999
Q ss_pred EEEEEcCc
Q 001061 715 VYYIANGF 722 (1167)
Q Consensus 715 ty~I~~~~ 722 (1167)
+|+|..+.
T Consensus 143 ty~i~~~~ 150 (159)
T 1o7d_C 143 IYSVSQMP 150 (159)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 99998753
No 7
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1
Probab=99.88 E-value=3.4e-23 Score=185.99 Aligned_cols=74 Identities=27% Similarity=0.490 Sum_probs=68.7
Q ss_pred CCceEEECCHHHHHHHHHHHhhcccCCCCCccCCCCccCCCceecccccccccCCccceeeeecchhhhhhhHHHHHHHH
Q 001061 447 LNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLR 526 (1167)
Q Consensus 447 ~~~~i~~sTl~dYf~al~~~~~~~~~~~~ge~~~~~~~~~P~~~GDffpYad~~~~yWtGyyTSRp~~K~~~R~~e~~Lr 526 (1167)
++|+|+||||+|||+||++.. ..||+++||||||||++++||||||||||.+|+++|++|++||
T Consensus 1 ~~v~v~ysT~s~Yf~al~~~~----------------~~~p~~~~DFfpYad~~~~yWtGyyTSRp~lK~~~R~~~~~L~ 64 (84)
T 1o7d_B 1 IRVNVLYSTPACYLWELNKAN----------------LSWSVKKDDFFPYADGPYMFWTGYFSSRPALKRYERLSYNFLQ 64 (84)
T ss_dssp CCEEEEECCHHHHHHHHHHTC----------------CCBCEECSCCCSCCSBTTBCSCGGGTSCHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHhC----------------CCCcccCCCcccccCCCCCcceeeeeCCHHHHHHHHHHHHHHH
Confidence 368999999999999999741 3699999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 001061 527 ATEMMVALLL 536 (1167)
Q Consensus 527 ~aE~L~sla~ 536 (1167)
+||+|+++|.
T Consensus 65 ~ae~L~~la~ 74 (84)
T 1o7d_B 65 VCNQLEALAG 74 (84)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHHh
Confidence 9999999874
No 8
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=99.72 E-value=6.3e-18 Score=165.05 Aligned_cols=110 Identities=21% Similarity=0.266 Sum_probs=80.1
Q ss_pred CCcCCCCCCCCCceeEEeeecCCCCCCCCCCCCccceeEEEEeeccCcccccCCCC---ccccccccccchhhhcccCcc
Q 001061 1040 RSFSPLAGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRS---QCVSVVDEPLNLFSMFKGLAI 1116 (1167)
Q Consensus 1040 ~~fs~l~~~LP~dvHLltLr~~~~~~~~~~~~~~~r~~liL~r~~~d~~~~~~~~~---~c~~~~~~~v~l~~LF~~~~v 1116 (1167)
.+|+++..+||||||||||++|.+.+ ++||.+|+ | +.+++ .|+. +++|+|++||.+|+|
T Consensus 3 ~~~s~l~~~LP~nvhLlTLe~~~~~~------------iLlRl~hl---~-e~~ed~~~~~s~--pv~v~l~~lF~~~~i 64 (126)
T 1o7d_E 3 TQFSGLRRELPPSVRLLTLARWGPET------------LLLRLEHQ---F-AVGEDSGRNLSS--PVTLDLTNLFSAFTI 64 (126)
T ss_dssp CEECSBSSCCCTTCEEEEEEEEETTE------------EEEEEECC---C-CTTTTTTTTCSS--CEEEECSSSBSSSEE
T ss_pred cccCcccccCCCcEeEEEEEEcCCCc------------EEEEEEee---c-ccccCcccccCc--ceEEeHHHhhccccc
Confidence 56999999999999999999987532 35555554 4 34443 4433 467999999999999
Q ss_pred ceEEEccccCccccccccCCCCcccCC---------CCCCceEeccceeeEEEEEEeeCC
Q 001061 1117 LNAKATSLNLLNDDIGMLGYPEQLEDV---------SQDGQVTIAPMEIQAYKLEMRPNE 1167 (1167)
Q Consensus 1117 ~~~~etsLt~~~~~~~~~~~~~~~~~~---------~~~~~v~L~PMEIrTf~i~~~~~~ 1167 (1167)
.+++||||++++...++.+|+|+.... ..+..|+|.|||||||+|++++++
T Consensus 65 ~~i~EttLtgn~~~~~~~Rl~w~~~~~~~~~~~~~~~~~~~vtL~PmEIRTFii~~~~~~ 124 (126)
T 1o7d_E 65 TNLRETTLAANQLLAYASRLQWTTDTGPTPHPSPSRPVSATITLQPMEIRTFLASVQWEE 124 (126)
T ss_dssp EEEEEECTTSSSBGGGCCCCCCCBC--------------CEEEECTTCEEEEEEEEEC--
T ss_pred ceEEEEccccccccccccccccccCCCCcccccccCCCCceEEEcCccEEEEEEEEEecc
Confidence 999999999988765554444443211 223579999999999999998753
No 9
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=99.69 E-value=2.6e-15 Score=185.16 Aligned_cols=144 Identities=19% Similarity=0.255 Sum_probs=130.0
Q ss_pred ceEEEEeeccccCcc-ccccHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcE
Q 001061 156 KLKIFVVPHSHNDPG-WKLTVDEYYDRQSRHILDTIVETLSKDARRKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQL 234 (1167)
Q Consensus 156 ~l~V~vVpHSH~D~G-Wl~T~deyy~~~v~~Ild~vv~~L~~dp~~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqL 234 (1167)
+..|.+|.|+|.|.+ |.|.+++ .+...+..+++.|+++|+.||...=...+..|+++.+|+..+++|+|+++||+
T Consensus 3 ~~~l~lv~H~HqP~~~~~~~~e~----a~~~~Y~pll~ll~~~~~~k~~~~~s~~ll~~l~~~~p~l~~~ik~l~~~G~v 78 (659)
T 1k1x_A 3 RINFIFGIHNHQPLGNFGWVFEE----AYNRSYRPFMEILEEFPEMKVNVHFSGPLLEWIEENKPDYLDLLRSLIKRGQL 78 (659)
T ss_dssp CEEEEEEEEECCCTTCCHHHHHH----HHHHTHHHHHHHHTTCTTCCEEEEECHHHHHHHHHHCHHHHHHHHHHHHTTCE
T ss_pred ceEEEEEEEccCCCccCcHHHHH----HHHHHHHHHHHHHHhCCCcEEEEEccHHHHHHHHHHCHHHHHHHHHHHHCCCE
Confidence 378999999999999 5555553 33344778999999999999986644788889999999999999999999999
Q ss_pred EEecceeccccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCchhHHHHHHHcCCceeEeecc
Q 001061 235 EIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRT 305 (1167)
Q Consensus 235 EivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~vi~Ri 305 (1167)
|++||+|+.+|..+...+++++|+.+|.++++ .||++|+..|.+|. |+++.+|++|+++||+++++.--
T Consensus 79 E~l~~~~~Hpi~~l~p~e~~~~QI~~g~~~~~-~FG~~P~G~WlPE~-~ys~~l~~iL~~~Gi~y~~td~~ 147 (659)
T 1k1x_A 79 EIVVAGFYEPVLAAIPKEDRLVQIEMLKDYAR-KLGYDAKGVWLTER-VWQPELVKSLREAGIEYVVVDDY 147 (659)
T ss_dssp EEEBCCTTCCCGGGSCHHHHHHHHHHHHHHHH-HTTCCCCEEECGGG-CBCTTHHHHHHHTTCCEEEEEHH
T ss_pred EEEccCcccccccCCCHHHHHHHHHHHHHHHH-HcCCCCCEEECccc-ccChhHHHHHHHcCCcEEEECch
Confidence 99999999999999999999999999999999 99999999999999 69999999999999999999864
No 10
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A
Probab=98.88 E-value=1.2e-07 Score=112.56 Aligned_cols=90 Identities=19% Similarity=0.208 Sum_probs=83.6
Q ss_pred HHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCC-CHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCch-----
Q 001061 213 WWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANS-HYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSA----- 286 (1167)
Q Consensus 213 Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~-~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~----- 286 (1167)
.|+...++.-+.+|+|++.|++||+++++.-+--.+. .-+++..|+..|.+..+++||.+|+..|.+.- |+++
T Consensus 136 ~~~~~~~dii~~fr~L~~~G~iEiit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~ 214 (540)
T 3p0b_A 136 HFQRLSGDLVAAFRKAEEGGQVELITSNATHGYSPLLGYDEALWAQIKTGVSTYRRHFAKDPTGFWLPEM-AYRPKGPWK 214 (540)
T ss_dssp HHHHTTTCHHHHHHHHHHHTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCCBEECGGG-CBCCSEEEC
T ss_pred HHHHhhHHHHHHHHHHHHCCCEEEEcCCchhhHHhcCCCHHHHHHHHHHHHHHHHHHhCCCCCEEECccc-ceeCccccc
Confidence 3455688899999999999999999999999998888 57999999999999999999999999999988 9998
Q ss_pred ------------hHHHHHHHcCCceeEee
Q 001061 287 ------------TMAYLLRRMGFENMLIQ 303 (1167)
Q Consensus 287 ------------~~p~Ll~~~G~~~~vi~ 303 (1167)
.+..+|+++||+++++-
T Consensus 215 ~~~~~~~~~~~~~l~~~L~~~Gi~y~~vd 243 (540)
T 3p0b_A 215 PPVEGPPEGVRPGVDELLMRAGIRYTFVD 243 (540)
T ss_dssp CSSSCSCCEEECCHHHHHHHTTCCEEEEC
T ss_pred cccccccccchhhHHHHHHHcCCeEEEEC
Confidence 99999999999999984
No 11
>2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4
Probab=98.82 E-value=2.2e-06 Score=103.33 Aligned_cols=146 Identities=14% Similarity=0.125 Sum_probs=108.1
Q ss_pred eEEEEeeccccCc------cccccHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEechHHHHHHHHh--------------
Q 001061 157 LKIFVVPHSHNDP------GWKLTVDEYYDRQSRHILDTIVETLSKDARRKFIWEEMSYLERWWRD-------------- 216 (1167)
Q Consensus 157 l~V~vVpHSH~D~------GWl~T~deyy~~~v~~Ild~vv~~L~~dp~~kFi~~Eis~f~~Ww~~-------------- 216 (1167)
+.|.+|=|.|.=. |.....+-.|...++ ..--++..|++.|+.|++.+=+.-|-.++++
T Consensus 3 ~~l~lvlH~HqP~~~~~~~~~~~~e~W~~~~~~~-~Y~pll~~l~~~~~~k~t~~lSP~LleqL~d~~l~~r~~~~l~~~ 81 (528)
T 2b5d_X 3 GKILIFLHAHLPYVHHPEYDHFLEERWLFEAITE-TYIPLLMMFDEIEDFRLTMSITPPLMEMLSSRDLQEKYERHMEKL 81 (528)
T ss_dssp EEEEEEEEECCCCCCCTTCSSCTTHHHHHHHHHH-THHHHHHHHHHSSCCCEEEEECHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred eeEEEEEECCCCCccCCCCCCcCcChHHHHHHHH-HHHHHHHHHHhCcCccEEEEECHHHHHHHhChhhhhhHHHHHHHH
Confidence 6788999999754 222223333443333 2446677788888888766622333334432
Q ss_pred --------------------------------------cCHHHHHHHHHHHHCCcEEEecceeccccccCCC--HHHHHH
Q 001061 217 --------------------------------------SSESQRASFTNLVKNGQLEIVGGGWVMNDEANSH--YFAIIE 256 (1167)
Q Consensus 217 --------------------------------------~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~--~esiI~ 256 (1167)
..++.-+.+|+|++.|++|++++++.-+=-.+.. -+++..
T Consensus 82 ~~~~~~e~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~li~~~r~L~~~G~vEll~~~y~H~ilPLl~d~~ed~~~ 161 (528)
T 2b5d_X 82 IELANKEVERTKKEHPLKHKMAKFYREHFEKILNVFRSYDGNILEGFKKYQETGKLEIVTCNATHAFLPLYQMYPEVVNA 161 (528)
T ss_dssp HHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHHHTSEEEEEECTTCBCGGGGTTCHHHHHH
T ss_pred HHHHhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHCCCEEEEcCchhhHHHHhcCCCHHHHHH
Confidence 1122236789999999999999999866654544 699999
Q ss_pred HHHHHHHHHHHhcCCCCCcceecCCCCCchhHHHHHHHcCCceeEeec
Q 001061 257 QIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQR 304 (1167)
Q Consensus 257 Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~vi~R 304 (1167)
|+..|.+.+++.||..|+.-|.+-. +.++.+..+|+++||+++++.=
T Consensus 162 QI~~g~~~~~~~FG~~P~G~WlpE~-a~~~~l~~~l~~~Gi~y~i~d~ 208 (528)
T 2b5d_X 162 QITVGVKNYEKHMKKHPRGIWLAEC-GYYQGLDLYLAQNNVEYFFVDS 208 (528)
T ss_dssp HHHHHHHHHHHHHSSCCSEEECGGG-CBCTTHHHHHHHTTCCEEEECT
T ss_pred HHHHHHHHHHHHhCCCCCEEECchh-ccChhHHHHHHHcCCeEEEECc
Confidence 9999999999999999999999875 9999999999999999999854
No 12
>3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A*
Probab=98.74 E-value=2.6e-07 Score=110.24 Aligned_cols=90 Identities=18% Similarity=0.321 Sum_probs=83.5
Q ss_pred HHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCC-HHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCch-----
Q 001061 213 WWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSH-YFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSA----- 286 (1167)
Q Consensus 213 Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~-~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~----- 286 (1167)
-|+...++.-+.+|+|++.|++||++++|.-+--.+.. -+++..|+..|.+..+++||.+|+..|.+.- ++++
T Consensus 115 ~~~~~~~dii~~fr~L~~~G~iElit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~ 193 (562)
T 3n98_A 115 YWKAINGDIIGKLRELQDQGYVEVITSAATHGYLPLLGRDEAIRAQIANGVATYEKHFGMKPKGIWLPEC-AYRPAGEWE 193 (562)
T ss_dssp HHHHTTTCHHHHHHHHHHTTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCSBEECGGG-CBCCSEEEE
T ss_pred HHHHhhhHHHHHHHHHHHCCCEEEEcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCCCCCEEECccc-ceeCccccc
Confidence 34567888999999999999999999999999988775 7999999999999999999999999999998 9999
Q ss_pred ----------hHHHHHHHcCCceeEee
Q 001061 287 ----------TMAYLLRRMGFENMLIQ 303 (1167)
Q Consensus 287 ----------~~p~Ll~~~G~~~~vi~ 303 (1167)
.+..+|+++||+++++-
T Consensus 194 ~~~~~~~~~~~i~~~L~~~Gi~y~~vd 220 (562)
T 3n98_A 194 LPGGRKVKRQGIEKFLEEFGLRYFFVE 220 (562)
T ss_dssp CGGGCEEEECCHHHHHHTTTCCEEEEC
T ss_pred cccccccchhhHHHHHHHcCCeEEEEC
Confidence 99999999999999984
No 13
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6
Probab=95.83 E-value=1.7 Score=48.91 Aligned_cols=219 Identities=16% Similarity=0.148 Sum_probs=130.5
Q ss_pred HHHHHHHHhcCCC-CcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHH
Q 001061 187 LDTIVETLSKDAR-RKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWL 265 (1167)
Q Consensus 187 ld~vv~~L~~dp~-~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l 265 (1167)
+..+++.|+++-- .+|-..- ..+ +..| +.+|+++++| .||.+=+|.-.+-..-+.+.+.++|..+.+.|
T Consensus 88 ~~rll~lL~~~~v~aTfFv~g-~~~-----~~~p---~~v~~i~~~G-hEIg~H~~~H~~~~~ls~~~~~~ei~~~~~~l 157 (321)
T 3s6o_A 88 VWRILREFDKRGLPLTVFGVG-MAI-----ERHP---ELARAFVELG-HEIACHGWRWIHYQDMTPEREAEHMRLGMEAI 157 (321)
T ss_dssp HHHHHHHHHHHTCCCEEEECH-HHH-----HHCH---HHHHHHHHTT-CEEEECCSSCSCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEH-HHh-----hhCH---HHHHHHHHcC-CEEeeCCccccccccCCHHHHHHHHHHHHHHH
Confidence 6788888888632 3333331 122 2333 5799999999 89988899887777788999999999999999
Q ss_pred HHhcCCCCCcceecCCCCCchhHHHHHHHcC-CceeEeeccchhhHHHHhcCCcceEEEEecCCCCCCCceEEEecCCcc
Q 001061 266 NDTIGFIPKNSWAIDPFGYSATMAYLLRRMG-FENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHMMPFYS 344 (1167)
Q Consensus 266 ~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G-~~~~vi~Ri~~~~K~~~~~~k~~eF~Wr~s~~~~~gs~I~th~~p~y~ 344 (1167)
++..|..|+ +|. .-.++..+..+++++| |.+-.-.+.+ ... +|-...+. .+...=...+| |+
T Consensus 158 ~~~~G~~p~-g~r--~g~~s~~t~~ll~e~G~f~Ydss~~~d-----------d~P-y~~~~~~~-~g~~~~l~~iP-~t 220 (321)
T 3s6o_A 158 ERVTGVRPL-GWY--TGRDSPNTHRLVAEYGGFLYDSDHYGD-----------DLP-FWMDVEVS-GGASVPQLIVP-YT 220 (321)
T ss_dssp HHHHSCCCC-EEC--CSSCCTTHHHHHHHHCCCSEECCCCSC-----------SSC-EEEEEECT-TSCEEEEEECC-CC
T ss_pred HHHhCCCcc-cEE--CCCCCHHHHHHHHHcCCeEEEEeccCC-----------CCC-cceeccCc-CCCCCCEEEEe-Ee
Confidence 999999875 565 3357889999999999 9987655432 122 34322110 12211233456 34
Q ss_pred cCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCCHhHHHHHHHHHHHHHHhhcccccCCeEEEEecCCCCCCch
Q 001061 345 YDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTI 424 (1167)
Q Consensus 345 Y~~p~tcgp~p~ic~~fDf~r~~g~~~~~cpw~~~p~~i~~~Nv~~ra~~ll~~~~k~s~~y~tn~lL~p~GdDf~y~~~ 424 (1167)
.+. .|+.- ...+...+.+.+.+....-+|.+.... +....+++++-+......
T Consensus 221 ~~~-------------~D~~~-----------~~~~g~~~~~~~~~~l~~~Fd~~y~eg---~~ap~~~~i~lH~~~~g~ 273 (321)
T 3s6o_A 221 LDA-------------NDMRF-----------ATPQGFNTADHFFHYLRDAFDVLYEEG---DEAPKMMSIGMHCRLLGR 273 (321)
T ss_dssp SSS-------------BGGGG-----------SSSSCCCSHHHHHHHHHHHHHHHHHHT---TTSCEEEEEEEETTTTTS
T ss_pred eee-------------CCeee-----------ecCCCCCCHHHHHHHHHHHHHHHHHhC---CCCCceEEEEeChHHcCC
Confidence 321 12110 000011234444433333333322111 111234555544333221
Q ss_pred hHHHHHHHhHHHHHHHHhcCCCCCceEEECCHHHHHHHHHHH
Q 001061 425 NEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREE 466 (1167)
Q Consensus 425 ~~a~~~f~n~~kli~~iN~~~~~~~~i~~sTl~dYf~al~~~ 466 (1167)
.....-++++++|+.+++ .|.|.|..+..+..++.
T Consensus 274 ---p~r~~~le~fL~~i~~~~----~Vw~~t~~eia~~~~~~ 308 (321)
T 3s6o_A 274 ---PGRFRALQRFLDHIERHD----RVWVARRVEIARHWREH 308 (321)
T ss_dssp ---HHHHHHHHHHHHHHHTCS----SEEECCHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHhCC----CEEEEcHHHHHHHHHhh
Confidence 112356899999999875 58899999988877664
No 14
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis}
Probab=94.98 E-value=4.6 Score=44.72 Aligned_cols=109 Identities=14% Similarity=0.128 Sum_probs=81.7
Q ss_pred HHHHHHHHHHhcCCC-CcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHH
Q 001061 185 HILDTIVETLSKDAR-RKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNM 263 (1167)
Q Consensus 185 ~Ild~vv~~L~~dp~-~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~ 263 (1167)
.-+..+++.|+++.= .+|-..- ..++ ..| +.+|+++++| .||.+=||.-.+-..-+.+.+.++|..+.+
T Consensus 62 ~~~~rll~ll~~~~v~aTfFv~g-~~~~-----~~p---~~v~~~~~~G-hEIg~H~~~H~~~~~~s~~~~~~ei~~~~~ 131 (300)
T 3rxz_A 62 VGVPRLLGILDEFNVPGTFFVPG-YTAH-----RHP---EPIRSIARAG-HEIAHHGYLHESLVGADEDTERKILTRGIE 131 (300)
T ss_dssp THHHHHHHHHHHTTCCEEEEECH-HHHH-----HSH---HHHHHHHHTT-CEEEECCSSCCCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEEH-HHHh-----hCH---HHHHHHHHcC-CEEEecCCCCcccccCCHHHHHHHHHHHHH
Confidence 347899999999843 2232221 2232 233 7899999999 899999998888778889999999999999
Q ss_pred HHHHhcCCCCCcceecCCCC-CchhHHHHHHHcCCceeEeecc
Q 001061 264 WLNDTIGFIPKNSWAIDPFG-YSATMAYLLRRMGFENMLIQRT 305 (1167)
Q Consensus 264 ~l~~~fG~~p~~gW~iDpFG-hS~~~p~Ll~~~G~~~~vi~Ri 305 (1167)
.|++.+|..|+ +|.. |+| ++..+..+++++||.+..-.+.
T Consensus 132 ~l~~~~G~~p~-~fr~-P~g~~~~~~~~~l~e~G~~ydss~~~ 172 (300)
T 3rxz_A 132 ALEEVAGVHPV-GYRA-PMWEMNWHTPKLLAEFGFLYDSTLMD 172 (300)
T ss_dssp HHHHHHSCCCC-EECC-GGGCCCTTHHHHHHHTTCSEECCCCS
T ss_pred HHHHHhCCCCc-EEEC-CCCCCCHHHHHHHHHcCCEEEeeccC
Confidence 99999998875 3442 333 4668899999999997765544
No 15
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A
Probab=92.31 E-value=0.95 Score=50.57 Aligned_cols=116 Identities=14% Similarity=0.027 Sum_probs=86.3
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhcCCC-CcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCC
Q 001061 172 KLTVDEYYDRQSRHILDTIVETLSKDAR-RKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSH 250 (1167)
Q Consensus 172 l~T~deyy~~~v~~Ild~vv~~L~~dp~-~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~ 250 (1167)
.-|||+-+.. -+..+++.|+++.= .+|-..- ..++ .+| +.+|+++++| .||.+=+|.-.+-...+
T Consensus 72 ~ltfDdG~~~----~~~~ll~iL~~~~v~aTfFv~g-~~~~-----~~p---~~v~~i~~~G-heIg~Ht~~H~~~~~~s 137 (308)
T 3cl6_A 72 ESLYEYGSRA----GVWRILKLFKAFDIPLTIFAVA-MAAQ-----RHP---DVIRAMVAAG-HEICSHGYRWIDYQYMD 137 (308)
T ss_dssp HHHHHHHHHT----HHHHHHHHHHHTTCCCEEEECH-HHHH-----HCH---HHHHHHHHTT-CEEEECCSSSSCCTTCC
T ss_pred eEEEecCchh----hHHHHHHHHHHcCCCEEEEeEH-HHHH-----HCH---HHHHHHHHcC-CEEEeCCCCCcccccCC
Confidence 3566665543 36788899988732 2333331 2232 233 5899999999 79999999877777778
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCchhHHHHHHHcC-CceeEeec
Q 001061 251 YFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMG-FENMLIQR 304 (1167)
Q Consensus 251 ~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G-~~~~vi~R 304 (1167)
.+.+.++|..+.+.|++.+|..|+ +|.. | .++..+..++++.| |.+..-.+
T Consensus 138 ~~~~~~ei~~~~~~l~~~~G~~p~-g~r~-~-~~~~~~~~~l~~~G~~~y~ss~~ 189 (308)
T 3cl6_A 138 EAQEREHMLEAIRILTELTGERPL-GWYT-G-RTGPNTRRLVMEEGGFLYDCDTY 189 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCS-EECC-S-SCCTTHHHHHHHHCCCSEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcc-eEEC-C-CCCHHHHHHHHHCCCceEEeccC
Confidence 899999999999999999999886 6664 3 66889999999999 98765544
No 16
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=89.22 E-value=1.9 Score=44.55 Aligned_cols=100 Identities=14% Similarity=0.209 Sum_probs=73.9
Q ss_pred HHHHHHHHhcCCC-Cc-EEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHH
Q 001061 187 LDTIVETLSKDAR-RK-FIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMW 264 (1167)
Q Consensus 187 ld~vv~~L~~dp~-~k-Fi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~ 264 (1167)
...+++.|+++.= .. |+-.+ +.++ +| +.+|+++++| .||-+=+|.-++-...+.+.+.++|....+.
T Consensus 19 ~~~il~iL~~~~v~aTfFv~g~--~~~~-----~~---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~ 87 (195)
T 2cc0_A 19 TQSLLNALRQNGLRATMFNQGQ--YAAQ-----NP---SLVRAQVDAG-MWVANHSYTHPHMTQLGQAQMDSEISRTQQA 87 (195)
T ss_dssp HHHHHHHHHHTTCCCEEEECHH--HHHH-----CH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCh--hhhh-----CH---HHHHHHHHCC-CEEEcCCCCccccccCCHHHHHHHHHHHHHH
Confidence 3566777777632 33 33322 3332 23 6799999999 8999999998887778899999999999999
Q ss_pred HHHhcCCCCCcceecCCCCCc-hhHHHHHHHcCCce
Q 001061 265 LNDTIGFIPKNSWAIDPFGYS-ATMAYLLRRMGFEN 299 (1167)
Q Consensus 265 l~~~fG~~p~~gW~iDpFGhS-~~~p~Ll~~~G~~~ 299 (1167)
|++..|..|+ +--=|+|.. ..+..+++++||..
T Consensus 88 l~~~~G~~~~--~fr~P~G~~~~~~~~~~~~~G~~~ 121 (195)
T 2cc0_A 88 IAGAGGGTPK--LFRPPYGETNATLRSVEAKYGLTE 121 (195)
T ss_dssp HHHTTSCCCS--EECCGGGCCCHHHHHHHHHTTCEE
T ss_pred HHHHhCCCCC--EEECCCCCcCHHHHHHHHHCCCeE
Confidence 9999998875 334577754 46778888999864
No 17
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=87.77 E-value=2.4 Score=45.23 Aligned_cols=99 Identities=11% Similarity=0.202 Sum_probs=73.2
Q ss_pred HHHHHHHhcCCC-Cc-EEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHH
Q 001061 188 DTIVETLSKDAR-RK-FIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWL 265 (1167)
Q Consensus 188 d~vv~~L~~dp~-~k-Fi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l 265 (1167)
..+++.|+++.- .. |+-.+ +.+++ | +.+|+++++| .||-+=+|.-++-...+.+.+.+++..+.+.|
T Consensus 48 ~~il~iL~~~~v~ATfFv~g~--~~~~~-----p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l 116 (230)
T 2y8u_A 48 PQLLDLLSRYSARATFFVLGD--AAAQN-----P---GLLQRMRDEG-HQVGAHTYDHVSLPSLGYDGIASQMTRLEEVI 116 (230)
T ss_dssp HHHHHHHHHTTCCCEEEECHH--HHHHC-----H---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEecH--HHhHC-----H---HHHHHHHHCC-CEEEecccCCCCcccCCHHHHHHHHHHHHHHH
Confidence 456667766632 33 44332 33332 2 7899999999 79999999988877788999999999999999
Q ss_pred HHhcCCCCCcceecCCCCC-chhHHHHHHHcCCce
Q 001061 266 NDTIGFIPKNSWAIDPFGY-SATMAYLLRRMGFEN 299 (1167)
Q Consensus 266 ~~~fG~~p~~gW~iDpFGh-S~~~p~Ll~~~G~~~ 299 (1167)
++..|..|+ +--=|+|. +..+..+++++||..
T Consensus 117 ~~~~G~~~~--~fr~P~G~~~~~~~~~l~~~G~~~ 149 (230)
T 2y8u_A 117 RPALGVAPA--YMRPPYLETNELVLQVMRDLDYRV 149 (230)
T ss_dssp HHHHSSCBS--EECCGGGCCCHHHHHHHHHTTCEE
T ss_pred HHHhCCCCc--EEECCCCCCCHHHHHHHHHcCCEE
Confidence 999998764 33456764 457788888999864
No 18
>3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori}
Probab=87.66 E-value=3 Score=46.85 Aligned_cols=106 Identities=14% Similarity=0.207 Sum_probs=79.2
Q ss_pred HHHHHHHHHhcCCC-CcEEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHH
Q 001061 186 ILDTIVETLSKDAR-RKFIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMW 264 (1167)
Q Consensus 186 Ild~vv~~L~~dp~-~kFi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~ 264 (1167)
-+..+++.|+++-- .+|-..- ..+++ . .+.+|+++++|. ||.+=||.=.+-..-+.+.+.++|..+.+.
T Consensus 75 ~~~rlL~lL~~~~v~aTfFv~g-~~~~~-----~---p~~v~~i~~~Gh-EIg~H~~~H~~~~~~s~~~~~~ei~~~~~~ 144 (326)
T 3qbu_A 75 GIPRLLKLFKKYHLPATWFVPG-HSIET-----F---PEQMKMIVDAGH-EVGAHGYSHENPIAMSTKQEEDVLLKSVEL 144 (326)
T ss_dssp HHHHHHHHHHHTTCCCEEECCH-HHHHH-----C---HHHHHHHHTTTC-EEEBCCSSCCCGGGSCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCEEEEEEh-HHhhh-----C---HHHHHHHHHcCC-EEEeCCCCCcChhhCCHHHHHHHHHHHHHH
Confidence 37899999998743 3333331 22332 2 367899999997 999999987777777899999999999999
Q ss_pred HHHhcCCCCCcceecCCC-CCchhHHHHHHHcCCceeEee
Q 001061 265 LNDTIGFIPKNSWAIDPF-GYSATMAYLLRRMGFENMLIQ 303 (1167)
Q Consensus 265 l~~~fG~~p~~gW~iDpF-GhS~~~p~Ll~~~G~~~~vi~ 303 (1167)
|++.+|..|+ +|.. |+ ..+..+..+++++||.+..-.
T Consensus 145 l~~~~G~~p~-~fr~-P~g~~~~~~~~~l~e~G~~ydss~ 182 (326)
T 3qbu_A 145 IKDLTGKAPT-GYVA-PWWEFSNITNELLLKHGFKYDHSL 182 (326)
T ss_dssp HHHHHSSCCC-EECC-GGGCCSSHHHHHHHTTTCCEECCC
T ss_pred HHHHHCCCCc-EEEC-CCCCCCHHHHHHHHHcCCEEEeec
Confidence 9999998875 3442 33 356688999999999975443
No 19
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=81.13 E-value=6.1 Score=42.28 Aligned_cols=98 Identities=14% Similarity=0.184 Sum_probs=72.3
Q ss_pred HHHHHHhcCC-CCc-EEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHHH
Q 001061 189 TIVETLSKDA-RRK-FIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLN 266 (1167)
Q Consensus 189 ~vv~~L~~dp-~~k-Fi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~ 266 (1167)
.+++.|+++. ... |+-. .+.++ +| +.+|+++++| .||.+=+|.-.+-...+.+.+.++|..+.+.|+
T Consensus 60 ~il~iL~~~~v~ATfFv~g--~~~~~-----~p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~ 128 (240)
T 1ny1_A 60 KVLDVLKKHRVTGTFFVTG--HFVKD-----QP---QLIKRMSDEG-HIIGNHSFHHPDLTTKTADQIQDELDSVNEEVY 128 (240)
T ss_dssp HHHHHHHHTTCCCEEEECH--HHHHH-----CH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeC--hhhhh-----CH---HHHHHHHHCc-CChhcCCccccccccCCHHHHHHHHHHHHHHHH
Confidence 4666776663 233 3333 23333 22 6899999999 899999999888777889999999999999999
Q ss_pred HhcCCC-CCcceecCCCCC-chhHHHHHHHcCCce
Q 001061 267 DTIGFI-PKNSWAIDPFGY-SATMAYLLRRMGFEN 299 (1167)
Q Consensus 267 ~~fG~~-p~~gW~iDpFGh-S~~~p~Ll~~~G~~~ 299 (1167)
+..|.. |+ +--=|+|. +..+..+++++||..
T Consensus 129 ~~~G~~~~~--~fr~P~G~~~~~~~~~l~~~G~~~ 161 (240)
T 1ny1_A 129 KITGKQDNL--YLRPPRGVFSEYVLKETKRLGYQT 161 (240)
T ss_dssp HHHSCCCCC--EECCGGGEECHHHHHHHHHTTCEE
T ss_pred HHhCCCCCc--EEeCCCCCCCHHHHHHHHHcCCEE
Confidence 999986 43 33357774 567788889999864
No 20
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=78.45 E-value=2.8 Score=45.37 Aligned_cols=75 Identities=16% Similarity=0.138 Sum_probs=62.3
Q ss_pred HHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCC-chhHHHHHHHcCCce
Q 001061 222 RASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGY-SATMAYLLRRMGFEN 299 (1167)
Q Consensus 222 k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGh-S~~~p~Ll~~~G~~~ 299 (1167)
.+.+|+++++| .||-+=+|.-++-...+.+.+.++|..+.+.|++..|..|+ +--=|+|. +..+..+++++||..
T Consensus 88 p~~lr~i~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~--~fr~P~G~~~~~~~~~l~~~G~~~ 163 (254)
T 2iw0_A 88 PDTIRRMRADG-HLVGSHTYAHPDLNTLSSADRISQMRQLEEATRRIDGFAPK--YMRAPYLSCDAGCQGDLGGLGYHI 163 (254)
T ss_dssp HHHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHSCEES--EECCGGGCCCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHCC-CEEEeeccCCCCcccCCHHHHHHHHHHHHHHHHHHhCCCCC--EEECCCCCCCHHHHHHHHHcCCeE
Confidence 37899999999 89999999988877788999999999999999999998764 33456764 456788888999864
No 21
>2w3z_A Putative deacetylase; PGDA, glcnac DE-N-acetylase, hydrolase, divale metal cation dependent, carbohydrate esterase family 4; 1.45A {Streptococcus mutans UA159}
Probab=75.20 E-value=13 Score=41.36 Aligned_cols=100 Identities=13% Similarity=0.111 Sum_probs=69.0
Q ss_pred HHHHHHHhcCCC-Cc-EEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceecccccc-----CCCHHHHHHHHHH
Q 001061 188 DTIVETLSKDAR-RK-FIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEA-----NSHYFAIIEQIME 260 (1167)
Q Consensus 188 d~vv~~L~~dp~-~k-Fi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa-----~~~~esiI~Ql~~ 260 (1167)
..+++.|+++.= .. |+-.+ +.++ .+ .+.+|+++++| .||-+=+|.-++-. ..+.+.+.+++..
T Consensus 123 ~~iLdiL~~~~vkATFFv~G~--~i~~----~~---p~~vr~i~~~G-heIgnHt~sH~~~~~~~~~~ls~~~~~~Ei~~ 192 (311)
T 2w3z_A 123 PKILDVLAQQHVHATFFLVGC--NITD----KV---KPILQRQITEG-HALGIHSFSHVYSLLYPNRVGNTQQIVSEVTR 192 (311)
T ss_dssp HHHHHHHHHTTCCCEEEECGG--GCCG----GG---HHHHHHHHHTT-CEEEECCSSCCHHHHSGGGBCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEEeCh--hhcc----cC---HHHHHHHHHCC-CeeeccCCccccccccccCCCCHHHHHHHHHH
Confidence 566777777632 33 54443 1221 02 36799999999 79988899765432 3478999999999
Q ss_pred HHHHHHHhcC--CCCCcceecCCCCCchh-----HHHHHHHcCCce
Q 001061 261 GNMWLNDTIG--FIPKNSWAIDPFGYSAT-----MAYLLRRMGFEN 299 (1167)
Q Consensus 261 Gh~~l~~~fG--~~p~~gW~iDpFGhS~~-----~p~Ll~~~G~~~ 299 (1167)
+.+.|++..| ..|+ +--=|+|.... +..+++++||..
T Consensus 193 ~~~~L~~~~G~~~~p~--~fR~PyG~~~~~~~~~~~~~l~~~G~~~ 236 (311)
T 2w3z_A 193 TQNALKDQLGQNFKTG--VWRYPGGHLSWTGLEAADKQLAAQGIQW 236 (311)
T ss_dssp HHHHHHHHHCTTBCCC--EECCTTCGGGCBCCHHHHHHHHTTTCEE
T ss_pred HHHHHHHHhCCCCCCc--EEECCCCCcChhHHHHHHHHHHHCCCEE
Confidence 9999999999 5443 33458887542 457888999864
No 22
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=73.48 E-value=5.2 Score=43.04 Aligned_cols=76 Identities=17% Similarity=0.199 Sum_probs=62.4
Q ss_pred HHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCC-chhHHHHHHHcCCcee
Q 001061 223 ASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGY-SATMAYLLRRMGFENM 300 (1167)
Q Consensus 223 ~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGh-S~~~p~Ll~~~G~~~~ 300 (1167)
+.+|+++++| .||-+=+|.-++-...+.+.+.++|..+.+.|++.+|..+-. |--=|+|. +..+..+++++||..+
T Consensus 98 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~~-~fr~P~G~~~~~~~~~l~~~G~~~v 174 (247)
T 2j13_A 98 DLLLRMKDEG-HIIGNHSWSHPDFTAVNDEKLREELTSVTEEIKKVTGQKEVK-YVRPPRGVFSERTLALTKEMGYYNV 174 (247)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHCCSCCC-EECCGGGEECHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHCC-CEEEecCCCCcChhhCCHHHHHHHHHHHHHHHHHHhCCCCCc-EEeCCCCCCCHHHHHHHHHCCCEEE
Confidence 6899999999 799999999888777889999999999999999999987322 33346664 5677888999998753
No 23
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli}
Probab=71.77 E-value=12 Score=40.78 Aligned_cols=81 Identities=11% Similarity=0.218 Sum_probs=62.0
Q ss_pred HHHHHHHHHCCcEEEecceeccccccC-----------------------CC----HHHHHHHHHHHHHHHHHhcCCCCC
Q 001061 222 RASFTNLVKNGQLEIVGGGWVMNDEAN-----------------------SH----YFAIIEQIMEGNMWLNDTIGFIPK 274 (1167)
Q Consensus 222 k~~vk~LV~~GqLEivgGgwvm~DEa~-----------------------~~----~esiI~Ql~~Gh~~l~~~fG~~p~ 274 (1167)
.+.+|+++++|-.||-+=+|..+.-.. .+ -+.+.+++....+.|++.+|..|+
T Consensus 126 ~~~lr~m~~~G~~eIgsHT~~hH~~~~~~~~G~~~p~~~~~~y~~~~~~~es~~~~~~~i~~ei~~s~~~l~~~~G~~~~ 205 (268)
T 3vus_A 126 WQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPH 205 (268)
T ss_dssp HHHHHHHHHTTSEEECBCCSSCCSBCCCC-----CBTTSSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHCCCeEEecCccccccccccccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 478999999999999888887543211 11 356788899999999999999875
Q ss_pred cceecCCCCC-chhHHHHHHHcCCceeEeec
Q 001061 275 NSWAIDPFGY-SATMAYLLRRMGFENMLIQR 304 (1167)
Q Consensus 275 ~gW~iDpFGh-S~~~p~Ll~~~G~~~~vi~R 304 (1167)
+-.=|||. +..+-.+++++||+..+..+
T Consensus 206 --~fr~PyG~~n~~~~~~~~~~Gy~~a~t~~ 234 (268)
T 3vus_A 206 --VFVWPYGEANGIAIEELKKLGYDMFFTLE 234 (268)
T ss_dssp --EEECGGGCCCHHHHHHHHHTTCCEEECCC
T ss_pred --EEEeCCCcCCHHHHHHHHHCCCcEEEEec
Confidence 23348997 55678899999999887654
No 24
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=70.10 E-value=9.1 Score=41.26 Aligned_cols=73 Identities=14% Similarity=0.062 Sum_probs=60.4
Q ss_pred HHHHHHHHCCcEEEecceecc--ccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCC--CC-chhHHHHHHHcCC
Q 001061 223 ASFTNLVKNGQLEIVGGGWVM--NDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPF--GY-SATMAYLLRRMGF 297 (1167)
Q Consensus 223 ~~vk~LV~~GqLEivgGgwvm--~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpF--Gh-S~~~p~Ll~~~G~ 297 (1167)
+.+|+++++| .||-+=+|.- ++-...+.+.+.+++....+.|++..|..|+ +--=|+ |. +..+..+++++|+
T Consensus 71 ~~~~~i~~~G-heIg~Ht~~H~~~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~--~fr~P~~~G~~~~~~~~~l~~~G~ 147 (254)
T 2vyo_A 71 QLYRRAVEEG-HNVALRVDPSMDEGYQCLSQDALENNVDREIDTIDGLSGTEIR--YAAVPICNGQVNSEMYNILTERGV 147 (254)
T ss_dssp HHHHHHHHTT-CEEEEECCGGGTTCGGGSCHHHHHHHHHHHHHHHHHHHTSCCC--EEECCCBTTEECHHHHHHHHTTTC
T ss_pred HHHHHHHhCC-CEEEecCCCCCCcCcccCCHHHHHHHHHHHHHHHHHHHCCCCe--EEeCCccCCCCCHHHHHHHHHCCC
Confidence 3899999999 7999999998 7777778899999999999999999998764 233577 64 4567888888888
Q ss_pred c
Q 001061 298 E 298 (1167)
Q Consensus 298 ~ 298 (1167)
.
T Consensus 148 ~ 148 (254)
T 2vyo_A 148 L 148 (254)
T ss_dssp E
T ss_pred E
Confidence 6
No 25
>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=50.36 E-value=6.3 Score=39.73 Aligned_cols=15 Identities=27% Similarity=0.561 Sum_probs=13.7
Q ss_pred CcceecCCCCCchhH
Q 001061 274 KNSWAIDPFGYSATM 288 (1167)
Q Consensus 274 ~~gW~iDpFGhS~~~ 288 (1167)
+.||..|+|||+|++
T Consensus 106 ~~G~v~D~fGv~W~i 120 (163)
T 1u69_A 106 ACGWCRDKWGISWQI 120 (163)
T ss_dssp STTEEECTTSCEEEE
T ss_pred EEEEEECCCCCEEEE
Confidence 788999999999984
No 26
>4f9d_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; family 4 carbohydrate esterase, TIM barrel, hydrolase, deace carbohydrate/sugar binding; HET: MES; 1.90A {Escherichia coli} PDB: 4f9j_A*
Probab=43.34 E-value=40 Score=41.12 Aligned_cols=81 Identities=11% Similarity=0.211 Sum_probs=62.6
Q ss_pred HHHHHHHHHCCcEEEecceecccccc------------CC-----------C----HHHHHHHHHHHHHHHHHhcCCCCC
Q 001061 222 RASFTNLVKNGQLEIVGGGWVMNDEA------------NS-----------H----YFAIIEQIMEGNMWLNDTIGFIPK 274 (1167)
Q Consensus 222 k~~vk~LV~~GqLEivgGgwvm~DEa------------~~-----------~----~esiI~Ql~~Gh~~l~~~fG~~p~ 274 (1167)
.+.+|++.++|-+||-+=+|..+--. ++ + -+.+.++|....+.|++.+|..|+
T Consensus 130 w~qlrem~~sG~~EIGsHT~shH~~l~~~p~G~~~Pa~l~r~~~~~~~~~es~~e~~~~i~~EL~~Sk~~Le~~lG~~~~ 209 (618)
T 4f9d_A 130 WQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPH 209 (618)
T ss_dssp HHHHHHHHHHTSEEECBCCSSCCSEEECSTTCCEEEGGGSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHCCCcEEeecccccccccccccccccccchhcccccccccccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 48999999999999977788743210 00 1 257899999999999999999876
Q ss_pred cceecCCCCC-chhHHHHHHHcCCceeEeec
Q 001061 275 NSWAIDPFGY-SATMAYLLRRMGFENMLIQR 304 (1167)
Q Consensus 275 ~gW~iDpFGh-S~~~p~Ll~~~G~~~~vi~R 304 (1167)
. -.=|||. +...-.+++++||+..+..+
T Consensus 210 ~--FayPyG~~n~~~~~~ake~Gy~~afTt~ 238 (618)
T 4f9d_A 210 V--FVWPYGEANGIAIEELKKLGYDMFFTLE 238 (618)
T ss_dssp E--EECGGGCCCHHHHHHHHHTTCCEEECCC
T ss_pred E--EEcCCCCCCHHHHHHHHHcCCEEEEEec
Confidence 2 2348986 67788999999999887654
No 27
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=43.01 E-value=32 Score=35.95 Aligned_cols=87 Identities=20% Similarity=0.243 Sum_probs=62.7
Q ss_pred HHHHHHHhcCC-CCc-EEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHH
Q 001061 188 DTIVETLSKDA-RRK-FIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWL 265 (1167)
Q Consensus 188 d~vv~~L~~dp-~~k-Fi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l 265 (1167)
..+++.|+++. ... |+-.+ +..++ | .+.+|+++++| .||-+=+|.-++-...+.+.+.++|..+.+.|
T Consensus 21 ~~il~iL~~~~v~ATfFv~g~--~~~~~-----p--~~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l 90 (216)
T 2c71_A 21 ARVLDKLDKYNVKATFMVVGQ--RVNDS-----T--AAIIRRMVNSG-HEIGNHSWSYSGMANMSPDQIRKSIADTNAVI 90 (216)
T ss_dssp HHHHHHHHHHTCCCEEEECGG--GCSHH-----H--HHHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECh--hhhhC-----H--HHHHHHHHHCC-CEEeeCCcCCcchhhCCHHHHHHHHHHHHHHH
Confidence 35666777653 233 44443 12221 2 14899999999 89999999988877778999999999999999
Q ss_pred HHhcCCCCCcceecCCCCCch
Q 001061 266 NDTIGFIPKNSWAIDPFGYSA 286 (1167)
Q Consensus 266 ~~~fG~~p~~gW~iDpFGhS~ 286 (1167)
++.+|..|+ +--=|+|...
T Consensus 91 ~~~~G~~~~--~fr~P~G~~~ 109 (216)
T 2c71_A 91 QKYAGTTPK--FFRPPNLETS 109 (216)
T ss_dssp HHHHSCCCS--EECCGGGCCC
T ss_pred HHhhCCCCe--EEECCCCCCC
Confidence 999998775 2335788644
No 28
>2c1i_A Peptidoglycan glcnac deacetylase; carbohydrate esterase, peptidoglycan deacetylase, metalloenzyme, D275N mutant, hydrolase; HET: MES; 1.35A {Streptococcus pneumoniae} SCOP: c.6.2.3 d.341.1.1 PDB: 2c1g_A
Probab=41.73 E-value=38 Score=39.44 Aligned_cols=96 Identities=16% Similarity=0.205 Sum_probs=69.7
Q ss_pred HHHHHHHhcCCC-Cc-EEEechHHHHHHHHhcCHHHHHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHH
Q 001061 188 DTIVETLSKDAR-RK-FIWEEMSYLERWWRDSSESQRASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWL 265 (1167)
Q Consensus 188 d~vv~~L~~dp~-~k-Fi~~Eis~f~~Ww~~~~p~~k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l 265 (1167)
..+++.|+++.= .. |+-.+ +.. .+| +.+|+++++| .||-+=+|.-++-...+.+.+.++|..+.+.|
T Consensus 252 ~~il~iL~k~~vkATFFvig~--~i~-----~~p---~~lr~m~~~G-heIgnHT~sH~~l~~ls~~~~~~EI~~s~~~L 320 (431)
T 2c1i_A 252 PQVLETLAKYDIKATFFVLGK--NVS-----GNE---DLVKRIKSEG-HVVGNHSWSHPILSQLSLDEAKKQITDTEDVL 320 (431)
T ss_dssp HHHHHHHHHTTCCCEEEECGG--GTT-----TCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEEECc--ccc-----CCH---HHHHHHHHCC-CEEeecCCCCcccccCCHHHHHHHHHHHHHHH
Confidence 467788887632 23 55443 222 233 6899999999 79999999988777778899999999999999
Q ss_pred HHhcCCCCCcceecCCCCCchhHHHHHHHcCCc
Q 001061 266 NDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFE 298 (1167)
Q Consensus 266 ~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~ 298 (1167)
++..|..|+ +|. =|||... +.+++.+|+.
T Consensus 321 ~~~~G~~~~-~fr-~PyG~~n--~~v~~~~G~~ 349 (431)
T 2c1i_A 321 TKVLGSSSK-LMR-PPYGAIT--DDIRNSLDLS 349 (431)
T ss_dssp HHHHSCCCC-EEC-CGGGCCC--HHHHHTSSCE
T ss_pred HHhhCCCCe-EEE-CCCCCCC--HHHHHHCCCe
Confidence 999997764 344 5888755 3455666653
No 29
>4hd5_A Polysaccharide deacetylase; TIM barrel, hydrolase; 1.90A {Bacillus cereus}
Probab=33.97 E-value=86 Score=35.51 Aligned_cols=79 Identities=10% Similarity=0.042 Sum_probs=55.9
Q ss_pred HHHHHHHHHCCcEEEecceeccccccCCCHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCCCchhHHHHHHHcCCceeE
Q 001061 222 RASFTNLVKNGQLEIVGGGWVMNDEANSHYFAIIEQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENML 301 (1167)
Q Consensus 222 k~~vk~LV~~GqLEivgGgwvm~DEa~~~~esiI~Ql~~Gh~~l~~~fG~~p~~gW~iDpFGhS~~~p~Ll~~~G~~~~v 301 (1167)
.++||+|.++|-+||-+=+|.-++-...+ .+-++|....+.|++.+|..|+ +-.=|||.-.....-+.+.||+..+
T Consensus 247 w~qIrem~~~G~~eIGsHT~sH~~L~~ls--~~e~EI~~Sk~~Le~~lG~~v~--~FAYPyG~yn~~v~~~ak~gy~~Af 322 (360)
T 4hd5_A 247 TSEIKEMVDSGIFSVQSHTATHADLPKIT--NYEEELKGSKEKLEKITGKPVI--AIAYXFGHVDDKVVTETKKYYQFAT 322 (360)
T ss_dssp HHHHHHHHHTTSEEEEECCSSCCCGGGCS--CHHHHHHHHHHHHHHHHSSCCC--EEECGGGCCCHHHHHHHTTTCSEEE
T ss_pred HHHHHHHHHcCCceeeccCCcccccccCC--HHHHHHHHHHHHHHHHhCCCCc--EEEcCCCCCCHHHHHHHHhCCcEEE
Confidence 57799999999999977788766533322 2347899999999999998875 3345999654433333345888777
Q ss_pred eec
Q 001061 302 IQR 304 (1167)
Q Consensus 302 i~R 304 (1167)
..+
T Consensus 323 Tt~ 325 (360)
T 4hd5_A 323 TTK 325 (360)
T ss_dssp EEE
T ss_pred Eec
Confidence 654
No 30
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=20.04 E-value=71 Score=33.77 Aligned_cols=58 Identities=21% Similarity=0.191 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhcCCCCcEEEechHHHHHHHHhcCHH-------HHHHHHHHHHCCcEEEeccee
Q 001061 184 RHILDTIVETLSKDARRKFIWEEMSYLERWWRDSSES-------QRASFTNLVKNGQLEIVGGGW 241 (1167)
Q Consensus 184 ~~Ild~vv~~L~~dp~~kFi~~Eis~f~~Ww~~~~p~-------~k~~vk~LV~~GqLEivgGgw 241 (1167)
|.-+-.++.-+++=|..-|..+||.-|+..+....|. .|++++-|=+.|-|||+|-|-
T Consensus 189 rgWlldi~~cid~i~~~eFtL~diY~fe~~L~~~~P~N~~Ik~KIRQqLQ~LRD~g~IeFl~rG~ 253 (257)
T 4esj_A 189 RGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQILRDKEIIEFKGRGK 253 (257)
T ss_dssp HHHHHHHHHHHHHSCSSEEEHHHHHTTHHHHHHHSTTCSCHHHHHHHHHHHHHHTTSEEECSTTE
T ss_pred ccHHHHHHHHHHhcCcceeeHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHhhcCceEEecCCc
Confidence 3445567777777788889999998899999877665 367777788899999998773
Done!