Your job contains 1 sequence.
>001066
MQLSTASSSSPKKRDGSVSGPRLRKKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAAR
NLELRRSSRVRRAPVLLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSP
GVWGSRLRSRGRNVGFGAKSDESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDLVVSKA
EKLDRFKELNDLGDEPEKSGQEEEMHEKEEEVGTRGMKEESGRGEELEVVRNEREDSKTI
PESVVGNEGEDSKMIPESVLGVENVTEVVEADARVLIEEEETKELSDKELKEDCIGDENV
EVMDTTEKSDKERMQFEDRDERENHQDGGEHDGEDHRDGGEHDGEDHRDGGEHDGEDHRD
DGGEHDEVEDHQIGGEHNEGEDHPDGGEHVRISTSEVKDGSSDHQKDDFLAMLEEKPVEC
ENAPKVDAFNPGSDSTLGWPRIKQGRRCGLCGCGNDGKPPKRLIQDAGDSENEVYSGSSA
SEEPNYDIWDGFGDEPGWLGRLLGPINDRYGIAGTWVHQHCAVWSPEVYFAGLGCLKNIR
AALCRGRALKCTRCGRPGATIGCRVDRCPRTYHLPCARANGCIFDHRKFLIACTDHRHLF
QPYGDQYLARIKKLKARKMKMEIRKLSNDAWRKDMEAEEKWLENCGEDEEFLKREGKRLH
RDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPP
RGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVA
EKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAV
DPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQ
ALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKR
EAGIAAHDLVSSPLPSHLIPCLLQPLSTLLVSLYLDERLWLPPSLTKATKMIQSVIVSAL
DKKKLLSDHWWSHINDFLEEADIAKEIERRLQYAGIITGEASFSGLDAFAGDSNDDCANS
KPSIAHSYGINCSLLQNISCTASKGSGFRVLISGSPGSGQRHLAACLLHSFIGNVEIQKV
DLATISQEGRGDLVQGLTLLLSMFSFL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001066
(1167 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2083681 - symbol:AT3G15120 species:3702 "Arabi... 2665 1.5e-305 2
CGD|CAL0002985 - symbol:orf19.3949 species:5476 "Candida ... 767 6.2e-82 3
SGD|S000003502 - symbol:YTA7 "Protein that localizes to c... 771 8.2e-80 3
UNIPROTKB|F1MEU3 - symbol:ATAD2B "Uncharacterized protein... 752 4.1e-78 4
POMBASE|SPAC31G5.19 - symbol:abo1 "ATPase with bromodomai... 781 2.5e-77 2
MGI|MGI:1917722 - symbol:Atad2 "ATPase family, AAA domain... 757 3.5e-77 2
ASPGD|ASPL0000044770 - symbol:AN10191 species:162425 "Eme... 759 5.1e-77 3
UNIPROTKB|F1MEY1 - symbol:ATAD2B "Uncharacterized protein... 752 9.3e-77 4
UNIPROTKB|F1P871 - symbol:ATAD2B "Uncharacterized protein... 752 1.5e-76 4
UNIPROTKB|J9NU31 - symbol:ATAD2B "Uncharacterized protein... 752 2.4e-76 3
UNIPROTKB|F1RR16 - symbol:ATAD2 "Uncharacterized protein"... 758 2.7e-76 3
UNIPROTKB|Q9ULI0 - symbol:ATAD2B "ATPase family AAA domai... 752 9.8e-76 3
UNIPROTKB|E2RRW1 - symbol:ATAD2 "Uncharacterized protein"... 755 1.3e-75 3
UNIPROTKB|G4N7L8 - symbol:MGG_06380 "ATPase family AAA do... 725 1.7e-75 3
UNIPROTKB|E1BC78 - symbol:ATAD2 "Uncharacterized protein"... 757 2.0e-75 4
UNIPROTKB|Q6PL18 - symbol:ATAD2 "ATPase family AAA domain... 760 2.0e-75 3
ZFIN|ZDB-GENE-110411-210 - symbol:atad2b "ATPase family, ... 729 5.4e-75 4
UNIPROTKB|E9PSU0 - symbol:LOC500625 "Protein LOC500625" s... 744 1.2e-74 3
TAIR|locus:2198748 - symbol:AT1G05910 species:3702 "Arabi... 731 3.9e-74 4
ZFIN|ZDB-GENE-030131-5754 - symbol:wu:fi16e04 "wu:fi16e04... 744 6.8e-74 5
POMBASE|SPBP22H7.05c - symbol:abo2 "ATPase with bromodoma... 760 7.1e-74 2
DICTYBASE|DDB_G0281521 - symbol:DDB_G0281521 "BRAT group ... 739 1.4e-72 4
WB|WBGene00008682 - symbol:lex-1 species:6239 "Caenorhabd... 728 9.7e-72 2
UNIPROTKB|P54816 - symbol:lex-1 "Tat-binding homolog 7" s... 728 9.7e-72 2
UNIPROTKB|F1NN52 - symbol:F1NN52 "Uncharacterized protein... 742 1.8e-70 3
UNIPROTKB|D4A9R0 - symbol:LOC500625 "Protein LOC500625" s... 616 3.1e-62 2
UNIPROTKB|F1NUE7 - symbol:F1NUE7 "Uncharacterized protein... 614 5.2e-62 2
RGD|1304849 - symbol:Atad2 "ATPase family, AAA domain con... 576 6.4e-55 4
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 507 4.4e-45 2
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 463 7.3e-45 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 443 5.6e-44 2
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 457 6.6e-44 2
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 447 1.5e-43 2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 497 1.5e-43 2
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 497 1.5e-43 2
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 491 1.8e-43 3
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 490 2.1e-43 2
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 488 3.6e-43 2
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 488 3.6e-43 2
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 488 3.6e-43 2
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 488 3.6e-43 2
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 488 3.6e-43 2
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 488 3.6e-43 2
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 488 3.7e-43 2
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 495 4.0e-43 2
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 486 4.0e-43 3
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 488 4.3e-43 3
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 488 4.4e-43 2
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 491 4.4e-43 2
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 490 4.8e-43 2
UNIPROTKB|F1SCW5 - symbol:F1SCW5 "Uncharacterized protein... 415 5.7e-43 3
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 486 6.0e-43 2
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 486 6.0e-43 2
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 488 9.8e-43 2
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 486 9.8e-43 2
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 492 1.4e-42 2
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 492 1.4e-42 2
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 480 1.6e-42 1
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 476 4.3e-42 1
UNIPROTKB|F1NLN4 - symbol:SPATA5 "Uncharacterized protein... 476 6.3e-42 2
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 477 7.2e-42 3
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 484 1.3e-41 2
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 440 1.5e-41 2
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 481 1.9e-41 2
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 441 1.9e-41 2
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 441 1.9e-41 2
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 474 4.4e-41 2
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 468 7.5e-41 2
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 444 9.4e-41 1
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5... 471 1.2e-40 2
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 469 1.5e-40 2
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 469 1.5e-40 2
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 469 1.7e-40 2
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 441 2.0e-40 1
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 423 2.3e-40 2
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 439 3.2e-40 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 439 3.2e-40 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 438 4.1e-40 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 437 5.3e-40 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 437 5.3e-40 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 437 5.3e-40 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 437 5.3e-40 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 437 5.3e-40 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 437 5.3e-40 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 437 5.3e-40 1
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 436 6.7e-40 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 465 9.7e-40 3
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 465 9.7e-40 3
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 422 1.0e-39 2
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 469 1.1e-39 2
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 465 2.4e-39 2
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 467 2.8e-39 2
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 467 2.8e-39 2
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 430 3.0e-39 1
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 430 3.0e-39 1
CGD|CAL0005257 - symbol:RPT2 species:5476 "Candida albica... 417 3.5e-39 2
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 427 6.2e-39 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 427 6.2e-39 1
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 416 7.2e-39 2
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 426 8.0e-39 1
WARNING: Descriptions of 672 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2083681 [details] [associations]
symbol:AT3G15120 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009888 "tissue development" evidence=RCA]
[GO:0010638 "positive regulation of organelle organization"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0009506 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
IPI:IPI00537350 RefSeq:NP_188130.1 UniGene:At.39103 PRIDE:F4IXH3
EnsemblPlants:AT3G15120.1 GeneID:820743 KEGG:ath:AT3G15120
OMA:LLGPIND Uniprot:F4IXH3
Length = 1954
Score = 2665 (943.2 bits), Expect = 1.5e-305, Sum P(2) = 1.5e-305
Identities = 524/793 (66%), Positives = 613/793 (77%)
Query: 376 EHNEG-EDHPDGGEHVRISTSEVKDGSSDHQK--D---DFLAMLEEKPVECENAPK-VDA 428
E NE + + D GE +S + + + +H + D + + M +E P++ E K VD+
Sbjct: 414 EINESLKQNDDIGEQ-GVSRTPSNNKTKEHNEFLDRGGESVEMPDELPIQNETCKKAVDS 472
Query: 429 FNPGSDSTLGWPRIKQGRRCGLCGCGNDGKPPKRLIQDAGDSENEVYSGSSASEEPNYDI 488
+ SD LG P KQ RRCGLCG G DGK PK+L+QD GDS+ E SGSS+SEE YDI
Sbjct: 473 VSTSSDR-LGKPLFKQTRRCGLCGVGTDGKLPKKLMQDNGDSDVEAPSGSSSSEEQKYDI 531
Query: 489 WDGFGDEPGWLGRLLGPINDRYGIAGTWVHQHCAVWSPEVYFAGLGCLKNIRAALCRGRA 548
DGFGD+PGWLGRLLGPINDRYGI+GTWVHQ+CAVWSPEVYFAG+GCLKNIRAAL RGR+
Sbjct: 532 LDGFGDDPGWLGRLLGPINDRYGISGTWVHQNCAVWSPEVYFAGVGCLKNIRAALFRGRS 591
Query: 549 LKCTRCGRPGATIGCRVDRCPRTYHLPCARANGCIFDHRKFLIACTDHRHLFQPYGDQYL 608
LKCTRC RPGAT GCR PCARANGCIFDHRKFLIACTDHRH FQP+G Q
Sbjct: 592 LKCTRCDRPGATTGCR----------PCARANGCIFDHRKFLIACTDHRHHFQPHGRQCQ 641
Query: 609 ARIKKLKARKMKMEIRKLSNDAWRKDMEAEEKWLENCGEDEEFLKREGKRLHRDLLRIAP 668
R+ K+K ++M++E++K SNDAWRKD+EAEEKW E CGEDEEFLKRE KRLHRDLLR+AP
Sbjct: 642 VRMTKMKTKRMRLEMKKHSNDAWRKDVEAEEKWFEKCGEDEEFLKRESKRLHRDLLRVAP 701
Query: 669 VYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGH 728
YIGGSDS+SGK FEG++SVAGL+ V +CMKEVV++PLLYPEFFDNLGLTPPRG+LLHGH
Sbjct: 702 EYIGGSDSESGKAFEGWDSVAGLEGVTQCMKEVVLIPLLYPEFFDNLGLTPPRGILLHGH 761
Query: 729 PGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSII 788
PGTGKTLVVRALIGS ARG++RIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSII
Sbjct: 762 PGTGKTLVVRALIGSLARGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSII 821
Query: 789 FFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPG 848
FFDEIDGLAP R+RQQDQTHSSVVSTLLAL+DGLKSRGSVVVIGATN P+A+DPALRRPG
Sbjct: 822 FFDEIDGLAPKRSRQQDQTHSSVVSTLLALLDGLKSRGSVVVIGATNYPDAIDPALRRPG 881
Query: 849 RFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAI 908
RFDREIYFPLPS++DRAAI+SLHT +WPKPV+G LLKWIA TAGFAGAD+QALCTQAA+
Sbjct: 882 RFDREIYFPLPSVDDRAAIISLHTRKWPKPVSGYLLKWIAKETAGFAGADIQALCTQAAM 941
Query: 909 IALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKREAGIAAHD 968
IAL R+FPLQE L+AA S R LPSF+VEERDWLEALS SPPPCS+R AGIAA D
Sbjct: 942 IALNRSFPLQESLAAAELGVSSSNRAALPSFSVEERDWLEALSRSPPPCSRRGAGIAASD 1001
Query: 969 LVSSPLPSHXXXXXXXXXXXXXXXXXXDERLWLPPSLTKATKMIQSVIVSALDKKKLLSD 1028
+ SSPLP++ DER++LPP L+KA +Q+VI SAL KK+
Sbjct: 1002 IFSSPLPTYLVPSLLPPLCSLLVALHLDERIFLPPLLSKAAVDVQNVIRSALSDKKITEG 1061
Query: 1029 HWWSHINDFLEEADIAKEIERRLQYAGIITGEASFSGLDAFAGDSNDDCANSKPSIAHSY 1088
WWSH++ L E D+ K+I +RL GI+ G G A + D S +
Sbjct: 1062 CWWSHVDTLLHEVDVVKDIVQRLSCTGILDGGCDLVGSVASIPGTGDCSLGSAKFMVPRV 1121
Query: 1089 GINCSLLQNISCTASKGSGFRVLISGSPGSGQRHLAACLLHSFIGNVEIQKVDLATISQE 1148
+ +L N S ++ SGF++LI+G P SGQRHLA+C+LH FIGN E+ K+D ATISQE
Sbjct: 1122 CRHPGVLGNASVESTSKSGFQLLIAGGPKSGQRHLASCVLHCFIGNAEMLKIDTATISQE 1181
Query: 1149 GRGDLVQGLTLLL 1161
G GDLV G+T LL
Sbjct: 1182 GNGDLVLGVTHLL 1194
Score = 291 (107.5 bits), Expect = 1.5e-305, Sum P(2) = 1.5e-305
Identities = 111/335 (33%), Positives = 158/335 (47%)
Query: 6 ASSSSPKKRDGSVSGPRLRKKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARNLELR 65
+S K GS SG KK K+L AICEEEY KNHGE ++D D + G A + ELR
Sbjct: 3 SSHEVTKNHSGSPSG----KKSKKLAAICEEEYKKNHGE-SQDRDGGS--GLACADSELR 55
Query: 66 RSSRVRRAPVLLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGS 125
RSSRVR+ P +LD SP P KKR++ +K+ S S+ +R+ +D + S +P W S
Sbjct: 56 RSSRVRKIPSILDASPPPPKKRQRFNKS-----SSSIEKGKRN---EDGD-SDAPDGWKS 106
Query: 126 RLRSRGR-NVGFGAKSDESGHLSRRRKL-FR----EMDEDAE-SEVGMEKGS-EGGDLVV 177
RLRSR + NVGF A + + +RKL FR E+ E AE S+ EKG+ +GG L
Sbjct: 107 RLRSRRKKNVGFQASGRQRRVVKGKRKLVFRNRACELSEKAEASDREEEKGALKGGKL-- 164
Query: 178 SKAEKLDRFKELNDLGDEPEKSGQXXXXXXXXXXVGTRGMKEESG-RGEEL----EVVRN 232
+KA+K KE ++ ++ K T ++ES EE R
Sbjct: 165 NKAKKPVDVKE-SESSEDGGKESDTSNSEDVQKESDTSNSEDESASESEESMQADSAARE 223
Query: 233 EREDSKTIPESVV---GNEGEDSKMIPESVLGVENV-TEVVEADARVXXXXXXXXXXXXX 288
+ ++ K SV NE E + ES G ++ E+ ++D
Sbjct: 224 KYQEKKATKRSVFLESENEAEVDRTETESEDGTDSTDNEIDDSDEEGESETQCSAEKTGS 283
Query: 289 XXXXDCIGDENVEVMDTTEKSDKERMQFEDRDERE 323
+ NVE M E +Q E R++ E
Sbjct: 284 ET------EANVEEMRADTNVTMEAVQNESRNQME 312
Score = 49 (22.3 bits), Expect = 6.2e-280, Sum P(2) = 6.2e-280
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 379 EGEDHPDGGEHVRISTSE-VKDGSSDHQKDDFLAMLEEKPVECENAPK 425
E E DGG+ S SE V+ S +D A E+ ++ ++A +
Sbjct: 175 ESESSEDGGKESDTSNSEDVQKESDTSNSEDESASESEESMQADSAAR 222
Score = 43 (20.2 bits), Expect = 2.7e-279, Sum P(2) = 2.7e-279
Identities = 26/149 (17%), Positives = 58/149 (38%)
Query: 4 STASSSSPKKRDGSVSGPRLRKKHKRLDAICEEEYAKNHGEPNEDDDEA-AETGSAARNL 62
++ S+ + + + R+K++ A + ++ E D E +E G+ + +
Sbjct: 202 NSEDESASESEESMQADSAAREKYQEKKATKRSVFLESENEAEVDRTETESEDGTDSTDN 261
Query: 63 ELRRSSRVRRAPVLLDVSPSPVKKRRKMDKT---VNLYVSKSLNSSRRSAKEKDNEKSVS 119
E+ S + + + +++ N+ + N SR +E +NE +
Sbjct: 262 EIDDSDEEGESETQCSAEKTGSETEANVEEMRADTNVTMEAVQNESRNQMEELENE--IE 319
Query: 120 PGVWGSR-----LRSRGRNVGFGAKSDES 143
GV + + S N G G + DE+
Sbjct: 320 MGVEDEKKEMSVIVSESGN-GTGIREDEN 347
>CGD|CAL0002985 [details] [associations]
symbol:orf19.3949 species:5476 "Candida albicans" [GO:0042406
"extrinsic to endoplasmic reticulum membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0031936
"negative regulation of chromatin silencing" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 CGD:CAL0002985
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721858.1 RefSeq:XP_722018.1 ProteinModelPortal:Q5AK72
STRING:Q5AK72 GeneID:3636302 GeneID:3636397 KEGG:cal:CaO19.11431
KEGG:cal:CaO19.3949 Uniprot:Q5AK72
Length = 1314
Score = 767 (275.1 bits), Expect = 6.2e-82, Sum P(3) = 6.2e-82
Identities = 141/232 (60%), Positives = 180/232 (77%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F V GL + I +KE+V LPLLYPE + N +TPPRGVL HG PGTGKTL+ RAL SC
Sbjct: 399 FSVVGGLDNYINQLKEMVALPLLYPELYQNFAITPPRGVLFHGPPGTGKTLMARALAASC 458
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ +++I +F RKGADCL K+VG+AERQLRLLF+ A+ QPSIIFFDEIDGLAP R+ +Q
Sbjct: 459 STSERKITFFMRKGADCLSKWVGEAERQLRLLFEEAKNQQPSIIFFDEIDGLAPVRSSKQ 518
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
+Q H+S+VSTLLALMDG+ +RG V+VIGATNRP+A+DPALRRPGRFDRE YFPLP + R
Sbjct: 519 EQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAIDPALRRPGRFDREFYFPLPDLGSR 578
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFP 916
IL +HT +W + L+ +A T G+ GADL+ALCT+AA+ +++R +P
Sbjct: 579 KEILKIHTRKWNPELPDLFLERLAQLTKGYGGADLRALCTEAALNSIQRKYP 630
Score = 84 (34.6 bits), Expect = 6.2e-82, Sum P(3) = 6.2e-82
Identities = 41/160 (25%), Positives = 73/160 (45%)
Query: 996 DERLWLPPSLTKAT-----KMIQSVIVSALDKKKLLSDHWWSHINDFLEEADIAKEIERR 1050
+E+L + PS K K I+ ++ S+ S H+ LE ++ + IE+
Sbjct: 636 NEKLKVNPSKVKVIAKDFMKAIEKIVPSSARSTSSGSAPLSEHLKPLLE-SEYQEIIEKL 694
Query: 1051 LQYAGIITGEASFSGLDAFAGDSNDDCANSKPSIAHSYG--INCSLLQNISCTASKGSGF 1108
Q ++ G F + D+ P+I G LL+N+ S+
Sbjct: 695 NQ---LLPNTVGLDGRKKFT--ALDEAKYLDPTINDEDGGFAKQQLLKNLE--NSRICRP 747
Query: 1109 RVLISGSPGSGQRHLAACLLHSFIGNVEIQKVDLATISQE 1148
+LISG+ G+GQ++L+A +L+ G ++Q +DL T+ E
Sbjct: 748 HLLISGNEGNGQQYLSAAVLNHLEG-FQVQSLDLGTMFGE 786
Score = 73 (30.8 bits), Expect = 6.2e-82, Sum P(3) = 6.2e-82
Identities = 36/133 (27%), Positives = 56/133 (42%)
Query: 131 GRNVGFGAKSDESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDLVVS-------KAEKL 183
G N G + G RR++ E D+D E +E+ SE D+V+S + ++
Sbjct: 83 GEN-GEDGFPESRGRRGRRKRSHIESDDDEFKEDQVEE-SEDDDIVLSADDEEFVEKKRT 140
Query: 184 DRF--KELNDLG-DEPEKSGQXXXXXXXXXXVGTRGMKEESGRGEELEVVRNER--ED-S 237
D F K+ N+ G D+ E G+ TR K S R+ R +D
Sbjct: 141 DNFIVKDDNEWGNDDEEDDGEYGVKPKRRKTSRTRKNKSNSSWTGSKRATRSGRALDDPD 200
Query: 238 KTIPESVVGNEGE 250
T+ + V +EGE
Sbjct: 201 NTLADGTVESEGE 213
Score = 48 (22.0 bits), Expect = 9.9e-81, Sum P(4) = 9.9e-81
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 20 GPRLRKKHKRLDAICEEEYAKNHGEPNEDDD 50
G R R+K +++ ++E+ ++ E +EDDD
Sbjct: 95 GRRGRRKRSHIESD-DDEFKEDQVEESEDDD 124
Score = 46 (21.3 bits), Expect = 9.9e-81, Sum P(4) = 9.9e-81
Identities = 18/76 (23%), Positives = 33/76 (43%)
Query: 120 PGVWGS-RLRSRGRNVGFGAKS-DESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDLVV 177
PG+ G+ + + G+N S DE ++ + ++ +D + VG K GG
Sbjct: 317 PGMTGAPNMTAIGQNFSDSDSSEDEIAPINGVATISKKQPKDKKPNVGGPKLITGGSDDT 376
Query: 178 SKAEKLDRFKELNDLG 193
S +K + + LG
Sbjct: 377 SGKKKKSTLSDTDPLG 392
Score = 44 (20.5 bits), Expect = 6.8e-79, Sum P(3) = 6.8e-79
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 3 LSTASSSSPKKRDGSVSGPRL 23
++T S PK + +V GP+L
Sbjct: 348 VATISKKQPKDKKPNVGGPKL 368
>SGD|S000003502 [details] [associations]
symbol:YTA7 "Protein that localizes to chromatin and
regulates histone expression" species:4932 "Saccharomyces
cerevisiae" [GO:0042393 "histone binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IMP;IDA]
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 SGD:S000003502
GO:GO:0005524 GO:GO:0005634 EMBL:BK006941 GO:GO:0045944
GO:GO:0003682 GO:GO:0000122 GO:GO:0031936 eggNOG:COG0464
GO:GO:0017111 GO:GO:0042393 GO:GO:0042406 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 EMBL:Y07893 EMBL:X81072
GeneTree:ENSGT00550000074694 EMBL:Z73055 PIR:S64603
RefSeq:NP_011786.1 ProteinModelPortal:P40340 SMR:P40340
DIP:DIP-6557N IntAct:P40340 MINT:MINT-629064 STRING:P40340
PaxDb:P40340 EnsemblFungi:YGR270W GeneID:853186 KEGG:sce:YGR270W
CYGD:YGR270w HOGENOM:HOG000157282 OMA:YPELYQN OrthoDB:EOG473T0K
NextBio:973329 Genevestigator:P40340 GermOnline:YGR270W
Uniprot:P40340
Length = 1379
Score = 771 (276.5 bits), Expect = 8.2e-80, Sum P(3) = 8.2e-80
Identities = 141/232 (60%), Positives = 185/232 (79%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+ + GL + I +KE+V LPLLYPE + N +TPPRGVL HG PGTGKTL+ RAL SC
Sbjct: 412 FDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAASC 471
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ +++I +F RKGAD L K+VG+AERQLRLLF+ A+K QPSIIFFDEIDGLAP R+ +Q
Sbjct: 472 SSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQ 531
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
+Q H+S+VSTLLALMDG+ +RG V+VIGATNRP+AVDPALRRPGRFDRE YFPLP ++ R
Sbjct: 532 EQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKAR 591
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFP 916
IL + T +W P++ + + +A T G+ GADL++LCT+AA+I+++R+FP
Sbjct: 592 FKILQIQTRKWSSPLSTNFIDKLAFLTKGYGGADLRSLCTEAALISIQRSFP 643
Score = 74 (31.1 bits), Expect = 8.2e-80, Sum P(3) = 8.2e-80
Identities = 14/40 (35%), Positives = 28/40 (70%)
Query: 1109 RVLISGSPGSGQRHLAACLLHSFIGNVEIQKVDLATISQE 1148
R+LI+G G+GQ+++ A +L+ ++ +Q +DLA++ E
Sbjct: 771 RLLINGPKGNGQQYVGAAILN-YLEEFNVQNLDLASLVSE 809
Score = 59 (25.8 bits), Expect = 8.2e-80, Sum P(3) = 8.2e-80
Identities = 36/150 (24%), Positives = 62/150 (41%)
Query: 22 RLRKKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARNLELRRSSRVRRAPVLLDVSP 81
R RK H + +E + + + +E+++EA E + + + ++R RRA V P
Sbjct: 112 RKRKAHDPEED--DESFHEEDVDDDEEEEEADEFEDEYLDEDSKDNNRRRRAADRKFVVP 169
Query: 82 SPVKKRR-KMDKTVNLYVSKSLNSSR----RSAKEKDNEKSVSPGVWGSRLRSRGRNVGF 136
P D +S S +S R S + + + +P LRSR R+
Sbjct: 170 DPDDDEEYDEDDEEGDRISHSASSKRLKRANSRRTRSSRHPETPPPVRRALRSRTRHSRT 229
Query: 137 G-AKSDESGHLSRRRKL-----FREMDEDA 160
++D+ SR L RE+ ED+
Sbjct: 230 SNEENDDENDNSRNEALTLADEIRELQEDS 259
Score = 44 (20.5 bits), Expect = 3.1e-79, Sum P(4) = 3.1e-79
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 25 KKHKRLDAICEEEYAKNHGEPNEDDD-EAAETGSAAR-NLEL--RRSSRVRRA 73
K +D +E + N +EDDD + AR N EL R+ R R+A
Sbjct: 64 KDETPVDVTSDEHHNNNQKGDDEDDDVDLVSPHENARTNEELTNERNLRKRKA 116
Score = 42 (19.8 bits), Expect = 3.1e-79, Sum P(4) = 3.1e-79
Identities = 7/30 (23%), Positives = 20/30 (66%)
Query: 297 DENVEVMDTTEKSDKERMQFEDRDERENHQ 326
+E+V+ + E++D+ ++ D D ++N++
Sbjct: 128 EEDVDDDEEEEEADEFEDEYLDEDSKDNNR 157
Score = 39 (18.8 bits), Expect = 1.0e-77, Sum P(3) = 1.0e-77
Identities = 9/48 (18%), Positives = 18/48 (37%)
Query: 44 EPNEDDDEAAETGSAARNLELRRSSRVRRAPVLLDVSPSPVKKRRKMD 91
+ + DDE G + + + ++ P + D+ P V D
Sbjct: 366 DSDSSDDEILPLGVTPKTKKENTQKKKKKKPEIADLDPLGVDMNVNFD 413
>UNIPROTKB|F1MEU3 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:DAAA02031678 EMBL:DAAA02031679 EMBL:DAAA02031680
EMBL:DAAA02031681 IPI:IPI00687055 Ensembl:ENSBTAT00000012179
Uniprot:F1MEU3
Length = 1248
Score = 752 (269.8 bits), Expect = 4.1e-78, Sum P(4) = 4.1e-78
Identities = 150/290 (51%), Positives = 203/290 (70%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+S+ GL I +KE+V+ PLLYPE F+ + PPRG L +G PGTGKTLV RAL C
Sbjct: 289 FDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANEC 348
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++GDK++A+F RKGADCL K+VG++ERQLRLLF A +PSIIFFDEIDGLAP R+ +Q
Sbjct: 349 SQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQ 408
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
DQ HSS+VSTLLALMDGL +RG +VVIGATNR +++DPALRRPGRFDRE F LP + R
Sbjct: 409 DQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKAR 468
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAA 924
IL +HT W ++ + L +A + G+ GAD++ALCT+AA+IAL+R +P + A+
Sbjct: 469 KHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQ---IYAS 525
Query: 925 AEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKREAGIAAHDLVSSPL 974
+ K ++ + S + +D+ A+ + P S+R + H L SP+
Sbjct: 526 SHKL----QLDVSSIVLNAQDFYHAMQ-NIVPASQRAVMSSGHAL--SPI 568
Score = 70 (29.7 bits), Expect = 4.1e-78, Sum P(4) = 4.1e-78
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 1109 RVLISGSPGSGQR-HLAACLLHSFIGNVEIQKVDLATI 1145
R+L+SG GSGQ HLA LLH+ + + ++DL +
Sbjct: 659 RLLLSGERGSGQTSHLAPALLHT-LEKFSVHRLDLPAL 695
Score = 56 (24.8 bits), Expect = 4.1e-78, Sum P(4) = 4.1e-78
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 647 EDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDV 694
++E F +R+ K + R R P+ + D SG L E + A L DV
Sbjct: 231 DEERFERRKSKSMARARNRCLPMNLRAEDLASGILRERVKVGASLADV 278
Score = 46 (21.3 bits), Expect = 4.1e-78, Sum P(4) = 4.1e-78
Identities = 20/110 (18%), Positives = 45/110 (40%)
Query: 75 VLLDVSPSPVKKRRKMDKT--VNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGR 132
VL ++ +++ R+ + + ++ + ++ K KS+ +G +
Sbjct: 47 VLQEMDNINIRRNRRSGEVERLRMWTDTEFENMDMYSRVKRRRKSLRRNSYGIQNHHEVS 106
Query: 133 NVGFGAKSDESGHLSRR-RKLFREMDEDAESEVGMEKGSEGGDLVVSKAE 181
G +E G + + ++ M +D E +E E GD+ V +AE
Sbjct: 107 TEG----EEEGGRKEKHIQTIYIYMTQDGEVCGKLESQEEDGDIEVEEAE 152
>POMBASE|SPAC31G5.19 [details] [associations]
symbol:abo1 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISM] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC31G5.19 GO:GO:0005524 EMBL:CU329670
GO:GO:0006357 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000157282 OrthoDB:EOG473T0K PIR:T38636
RefSeq:NP_594020.1 ProteinModelPortal:O14114 STRING:O14114
EnsemblFungi:SPAC31G5.19.1 GeneID:2543084 KEGG:spo:SPAC31G5.19
OMA:ITRIMAN NextBio:20804112 Uniprot:O14114
Length = 1190
Score = 781 (280.0 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
Identities = 142/232 (61%), Positives = 183/232 (78%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
FESV GL + I +KE+V+LPLLYPE F + PPRGVL HG PGTGKTL+ RAL +C
Sbjct: 265 FESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAAC 324
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ +K+++++ RKGADCL K+VG+AERQLRLLF+ A+ QPSIIFFDEIDGLAP R+ +Q
Sbjct: 325 SSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQ 384
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
+Q H+S+VSTLLALMDG++SRG V++IGATNRP+AVDPALRRPGRFDRE YFPLP + R
Sbjct: 385 EQIHASIVSTLLALMDGMESRGQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDAR 444
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFP 916
I+ +HT W PV L +A ++ G+ GADL+ALCT+AA+ ++KR +P
Sbjct: 445 KKIIEIHTRNWDPPVPEWLCSMLAEKSKGYGGADLRALCTEAALNSIKRTYP 496
Score = 51 (23.0 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
Identities = 61/279 (21%), Positives = 101/279 (36%)
Query: 2 QLSTASSSSPKKRDGSVSGPRLRKKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARN 61
+LS S SS D + + R++ + + A A E +ED +E A R
Sbjct: 17 ELSPVSDSS----DEMPNNAKRRRRSQSMIANKRIHQAFQEDEGDEDWEEEEHKPKAKRR 72
Query: 62 LELRRSSRVRRAPVLLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPG 121
R + D P V + ++ + S S +S RS + K K PG
Sbjct: 73 YNTRSNESFSEG----DDEPFEVSESSALEDEL----SDSEDSFIRSVRSKPKYK---PG 121
Query: 122 VWGS-RLRSRGRNVGFGAKSDESGHLSRRRK---------LFR---EMDEDAESEVGMEK 168
S RLR+R R+ +E + R R F EMD D S+V +
Sbjct: 122 TRRSTRLRNR-RSQDEEESEEEHRPILRERTSRINYSVPLAFPPVDEMDGDPSSQVNQSR 180
Query: 169 GSEG-GDLVVSKA--EKLDRFKELNDLGDEPEKSGQXXXXXXXXXXVGTRGMKEESGRGE 225
+ +L ++K +++ F D +S + SG
Sbjct: 181 SRKTHSELAITKLLRQQVSSFMPYIDSSGSESESDNTRIKKSSAKTIKALTDPANSGGPP 240
Query: 226 ELEVVRNEREDSKTIPESVVGNEGEDSKMIPESVLGVEN 264
+ +R + + + + P V DS + ESV G++N
Sbjct: 241 DFGRIREKSDLADSDPLGV------DSSLSFESVGGLDN 273
Score = 42 (19.8 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 378 NEGEDHPDGGEHVRIS-TSEVKDGSSDHQKDDFLAMLEEKP 417
+EG+D P +S +S ++D SD + D F+ + KP
Sbjct: 82 SEGDDEP-----FEVSESSALEDELSDSE-DSFIRSVRSKP 116
>MGI|MGI:1917722 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
MGI:MGI:1917722 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006200 GO:GO:0006351 GO:GO:0016887 eggNOG:COG0464
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 CTD:29028
HOVERGEN:HBG080873 ChiTaRS:ATAD2 EMBL:AK029867 EMBL:AK134319
IPI:IPI00135252 IPI:IPI00228860 RefSeq:NP_081711.2
UniGene:Mm.221758 ProteinModelPortal:Q8CDM1 SMR:Q8CDM1
IntAct:Q8CDM1 STRING:Q8CDM1 PhosphoSite:Q8CDM1 PRIDE:Q8CDM1
GeneID:70472 KEGG:mmu:70472 UCSC:uc007vtf.1 UCSC:uc007vtg.1
HOGENOM:HOG000034119 InParanoid:Q3UYW6 NextBio:331701
CleanEx:MM_ATAD2 Genevestigator:Q8CDM1
GermOnline:ENSMUSG00000022360 Uniprot:Q8CDM1
Length = 1040
Score = 757 (271.5 bits), Expect = 3.5e-77, Sum P(2) = 3.5e-77
Identities = 160/313 (51%), Positives = 212/313 (67%)
Query: 651 FLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEG--FESVAGLQDVIRCMKEVVILPLLY 708
F K E + +++D ++I +D D +L F+SV GL I +KE+V+ PLLY
Sbjct: 47 FRKDEIRGIYKDRMKIGASL---ADVDPMQLDTSVRFDSVGGLSSHIAALKEMVVFPLLY 103
Query: 709 PEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGD 768
PE F+ + PPRG L +G PGTGKTLV RAL C+RGDKR+A+F RKGADCL K+VG+
Sbjct: 104 PEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGE 163
Query: 769 AERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSV 828
+ERQLRLLF A + +P+IIFFDEIDGLAP R+ +QDQ HSS+VSTLLALMDGL SRG +
Sbjct: 164 SERQLRLLFDQAYQMRPAIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEI 223
Query: 829 VVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERW-PKPVTGSLLKWI 887
VVIGATNR +++DPALRRPGRFDRE F LP R IL +HT W PKPV L+ +
Sbjct: 224 VVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEILKIHTRDWNPKPVD-MFLEEL 282
Query: 888 AARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVEERDWL 947
A G+ GAD++++C +AA+ AL+R +P +I + + EK ++ L S + +D+
Sbjct: 283 AEHCVGYCGADIKSICAEAALCALRRRYP--QIYTTS-EKL----QLDLSSITISAKDFE 335
Query: 948 EALSCSPPPCSKR 960
AL P S+R
Sbjct: 336 AALQ-KIRPASQR 347
Score = 63 (27.2 bits), Expect = 3.5e-77, Sum P(2) = 3.5e-77
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 1057 ITGEASFSGLDAFAGDSNDDCANS-KPSIAHSYGINCSLLQNISCTASKGSGFRVLISGS 1115
+ + S L++ S+DD + + ++ +N L +C R+LI G
Sbjct: 390 LNSDVSCPFLESDLAYSDDDTPSVYENGLSQKENLNFLHLNRNACYQPMSFRPRLLIVGE 449
Query: 1116 PGSGQR-HLAACLLHS 1130
PG GQ HLA ++H+
Sbjct: 450 PGFGQSSHLAPAVIHA 465
>ASPGD|ASPL0000044770 [details] [associations]
symbol:AN10191 species:162425 "Emericella nidulans"
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 GO:GO:0005524
EMBL:BN001307 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
EnsemblFungi:CADANIAT00008053 OMA:QPIMDQI Uniprot:C8VM55
Length = 1631
Score = 759 (272.2 bits), Expect = 5.1e-77, Sum P(3) = 5.1e-77
Identities = 154/291 (52%), Positives = 203/291 (69%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F++V GLQ I +KE+V LPLLYPE F + PPRGVL HG PGTGKTL+ RAL S
Sbjct: 568 FDNVGGLQGHIDQLKEMVSLPLLYPEIFQRFHIVPPRGVLFHGPPGTGKTLLARALANSV 627
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ +++ ++ RKGAD L K+VG+AERQLRLLF+ A K QPSIIFFDEIDGLAP R+ +Q
Sbjct: 628 SSEGRKVTFYMRKGADALSKWVGEAERQLRLLFEEARKTQPSIIFFDEIDGLAPVRSSKQ 687
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
+Q H+S+VSTLLALMDG+ RG V+VIGATNRP+++DPALRRPGRFDRE YFPLP+ E R
Sbjct: 688 EQIHASIVSTLLALMDGMDGRGQVIVIGATNRPDSIDPALRRPGRFDREFYFPLPNTEGR 747
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAA 924
AIL +HT+ W P+ S+ +A T G+ GADL+ALCT+AA+ A++R +P +I +
Sbjct: 748 RAILDIHTKGWDPPLPNSIKDELAEITKGYGGADLRALCTEAALNAVQRRYP--QIYKSD 805
Query: 925 AEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKREAGIAAHDLVSSPLP 975
+K R + V +D++ A+ + P S+R G A L + P
Sbjct: 806 -KKLLIDPR----TIEVAPKDFMLAIK-NITPSSERSTGSGASKLPKTVEP 850
Score = 80 (33.2 bits), Expect = 5.1e-77, Sum P(3) = 5.1e-77
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 1109 RVLISGSPGSGQRHLAACLLHSFIGNVEIQKVDLATI 1145
R+L+ G+ G GQ++LA LLH F G + +Q DL T+
Sbjct: 909 RLLLRGALGMGQQYLAGALLHHFEG-LHVQAFDLPTL 944
Score = 51 (23.0 bits), Expect = 5.1e-77, Sum P(3) = 5.1e-77
Identities = 39/173 (22%), Positives = 67/173 (38%)
Query: 40 KNHGEPNEDDDEAAETGSAARNLELRRSSRVR-RAPVLLDVSPSPVKKRRK--MDKTVNL 96
+N N++ EA + L RRSSR R ++ D S + D+
Sbjct: 287 RNRPNRNQNTQEATQQDEEENGL--RRSSRKRPKSSQRKDDEESDFEPEEDDTHDEDELS 344
Query: 97 YVSKSLNSSRRS--AKEKDNEKSVS--PGVWGSRLRSRGRNVGFGAKSDESGHLSRRRKL 152
KS S R++ A + D E S PG+ RSRG + + + L R
Sbjct: 345 QSGKSQGSPRKTSQAHDDDYESSTGRRPGLRKRASRSRGESEAVDIAEELAEELQDLRG- 403
Query: 153 FREMDEDAESEVGMEK---GSEGGDLVVSKAEKLDRFKEL-NDLGDEPEKSGQ 201
A+ E+ EK + D + + + + +E N++ + P + G+
Sbjct: 404 -GRPRRRAQQEIVYEKPRRSRKNVDYRIIRPDLVLPIEEAENEVNESPSRRGR 455
Score = 48 (22.0 bits), Expect = 1.1e-76, Sum P(3) = 1.1e-76
Identities = 41/188 (21%), Positives = 80/188 (42%)
Query: 5 TASSSSPKKRDGSVSGPRLRKKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAAR-NLE 63
+AS S +K++ R KK R D+ +++ + E +E DDE GS +++
Sbjct: 33 SASKSKSRKKN------RPTKKRARRDS--DDDIVSDEDEISEFDDEFDFEGSPEEEDVD 84
Query: 64 LRRSSR---VRRA----PVLLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEK 116
R++R RRA PV + S S ++ + D+ + K + + +A ++
Sbjct: 85 APRTARGTVARRAATNRPVYNEGSDS-IEDEEEEDEEDVVPSPKKVVKLKVNALKRQAFS 143
Query: 117 SVSPGVWGSRLRSRGRNVGFGAKSDESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDLV 176
G + R+R + A ++ H+ +K +AE +GS+ V
Sbjct: 144 DNPTGTRRTTRRNRDPSEDIYALTNSGRHVQTVQK--GTHSPEAERGRRSSRGSKRAPEV 201
Query: 177 VSKAEKLD 184
+A++ D
Sbjct: 202 EGEADEAD 209
Score = 45 (20.9 bits), Expect = 2.2e-76, Sum P(3) = 2.2e-76
Identities = 38/180 (21%), Positives = 70/180 (38%)
Query: 111 EKDNEKSVSPGVWGSRLRSRGRNVGFGAKSDE--SG--HLSRRRKLFREMDEDAESEVGM 166
+ D++ P +R +N + DE +G SR+R + +D ES+
Sbjct: 273 DDDDDDDEGPTTRRRNRPNRNQNTQEATQQDEEENGLRRSSRKRPKSSQRKDDEESDFEP 332
Query: 167 EKGSEGGDLVVSKAEKLDRF-KELNDLGDEPEKSGQXXXXXXXXXXVGTRGMKEE----S 221
E+ + +S++ K ++ + D+ +S +RG E
Sbjct: 333 EEDDTHDEDELSQSGKSQGSPRKTSQAHDDDYESSTGRRPGLRKRASRSRGESEAVDIAE 392
Query: 222 GRGEELEVVRNEREDSKTIPESVV-----GNEGEDSKMI-PESVLGVENV-TEVVEADAR 274
EEL+ +R R + E V + D ++I P+ VL +E EV E+ +R
Sbjct: 393 ELAEELQDLRGGRPRRRAQQEIVYEKPRRSRKNVDYRIIRPDLVLPIEEAENEVNESPSR 452
Score = 40 (19.1 bits), Expect = 7.3e-76, Sum P(3) = 7.3e-76
Identities = 28/113 (24%), Positives = 48/113 (42%)
Query: 89 KMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFGAKSDESGHLSR 148
K D + Y + +SRRSA + + K P ++ R+R R+ SDE +S
Sbjct: 14 KSDSDDDDYSDHPVRNSRRSASKSKSRKKNRP----TKKRAR-RDSDDDIVSDED-EISE 67
Query: 149 RRKLFREMDEDAESEVGMEKGSEGGDLVVSKAEKLDR--FKELND-LGDEPEK 198
F E +V + + G V++ +R + E +D + DE E+
Sbjct: 68 FDDEFDFEGSPEEEDVDAPRTARG---TVARRAATNRPVYNEGSDSIEDEEEE 117
>UNIPROTKB|F1MEY1 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:DAAA02031678 EMBL:DAAA02031679
EMBL:DAAA02031680 EMBL:DAAA02031681 IPI:IPI01003034
Ensembl:ENSBTAT00000022935 Uniprot:F1MEY1
Length = 1465
Score = 752 (269.8 bits), Expect = 9.3e-77, Sum P(4) = 9.3e-77
Identities = 150/290 (51%), Positives = 203/290 (70%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+S+ GL I +KE+V+ PLLYPE F+ + PPRG L +G PGTGKTLV RAL C
Sbjct: 404 FDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANEC 463
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++GDK++A+F RKGADCL K+VG++ERQLRLLF A +PSIIFFDEIDGLAP R+ +Q
Sbjct: 464 SQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQ 523
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
DQ HSS+VSTLLALMDGL +RG +VVIGATNR +++DPALRRPGRFDRE F LP + R
Sbjct: 524 DQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKAR 583
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAA 924
IL +HT W ++ + L +A + G+ GAD++ALCT+AA+IAL+R +P + A+
Sbjct: 584 KHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQ---IYAS 640
Query: 925 AEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKREAGIAAHDLVSSPL 974
+ K ++ + S + +D+ A+ + P S+R + H L SP+
Sbjct: 641 SHKL----QLDVSSIVLNAQDFYHAMQ-NIVPASQRAVMSSGHAL--SPI 683
Score = 70 (29.7 bits), Expect = 9.3e-77, Sum P(4) = 9.3e-77
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 1109 RVLISGSPGSGQR-HLAACLLHSFIGNVEIQKVDLATI 1145
R+L+SG GSGQ HLA LLH+ + + ++DL +
Sbjct: 773 RLLLSGERGSGQTSHLAPALLHT-LEKFSVHRLDLPAL 809
Score = 56 (24.8 bits), Expect = 9.3e-77, Sum P(4) = 9.3e-77
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 647 EDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDV 694
++E F +R+ K + R R P+ + D SG L E + A L DV
Sbjct: 346 DEERFERRKSKSMARARNRCLPMNLRAEDLASGILRERVKVGASLADV 393
Score = 44 (20.5 bits), Expect = 9.3e-77, Sum P(4) = 9.3e-77
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 155 EMDEDAESEV-G-MEKGSEGGDLVVSKAE 181
E+ + E EV G +E E GD+ V +AE
Sbjct: 253 EVSTEGEEEVCGKLESQEEDGDIEVEEAE 281
>UNIPROTKB|F1P871 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:AAEX03010776 EMBL:AAEX03010777
EMBL:AAEX03010778 Ensembl:ENSCAFT00000006311 Uniprot:F1P871
Length = 1464
Score = 752 (269.8 bits), Expect = 1.5e-76, Sum P(4) = 1.5e-76
Identities = 150/290 (51%), Positives = 203/290 (70%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+S+ GL I +KE+V+ PLLYPE F+ + PPRG L +G PGTGKTLV RAL C
Sbjct: 402 FDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANEC 461
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++GDK++A+F RKGADCL K+VG++ERQLRLLF A +PSIIFFDEIDGLAP R+ +Q
Sbjct: 462 SQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQ 521
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
DQ HSS+VSTLLALMDGL +RG +VVIGATNR +++DPALRRPGRFDRE F LP + R
Sbjct: 522 DQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKAR 581
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAA 924
IL +HT W ++ + L +A + G+ GAD++ALCT+AA+IAL+R +P + A+
Sbjct: 582 KHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQ---IYAS 638
Query: 925 AEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKREAGIAAHDLVSSPL 974
+ K ++ + S + +D+ A+ + P S+R + H L SP+
Sbjct: 639 SHKL----QLDVSSIVLNAQDFYHAMQ-NIVPASQRAVMSSGHAL--SPI 681
Score = 70 (29.7 bits), Expect = 1.5e-76, Sum P(4) = 1.5e-76
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 1109 RVLISGSPGSGQR-HLAACLLHSFIGNVEIQKVDLATI 1145
R+L+SG GSGQ HLA LLH+ + + ++DL +
Sbjct: 772 RLLLSGERGSGQTSHLAPALLHT-LEKFSVHRLDLPAL 808
Score = 54 (24.1 bits), Expect = 1.5e-76, Sum P(4) = 1.5e-76
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 647 EDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDV 694
++E F +R+ K + R R P+ D SG L E + A L DV
Sbjct: 344 DEERFERRKSKSMARARNRCLPMNFRAEDLASGILRERVKVGASLADV 391
Score = 44 (20.5 bits), Expect = 1.5e-76, Sum P(4) = 1.5e-76
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 155 EMDEDAESEV-G-MEKGSEGGDLVVSKAE 181
E+ + E EV G +E E GD+ V +AE
Sbjct: 250 EVSTEGEEEVWGKLESQEEDGDIEVEEAE 278
>UNIPROTKB|J9NU31 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:AAEX03010776 EMBL:AAEX03010777 EMBL:AAEX03010778
Ensembl:ENSCAFT00000043993 Uniprot:J9NU31
Length = 1291
Score = 752 (269.8 bits), Expect = 2.4e-76, Sum P(3) = 2.4e-76
Identities = 150/290 (51%), Positives = 203/290 (70%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+S+ GL I +KE+V+ PLLYPE F+ + PPRG L +G PGTGKTLV RAL C
Sbjct: 237 FDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANEC 296
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++GDK++A+F RKGADCL K+VG++ERQLRLLF A +PSIIFFDEIDGLAP R+ +Q
Sbjct: 297 SQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQ 356
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
DQ HSS+VSTLLALMDGL +RG +VVIGATNR +++DPALRRPGRFDRE F LP + R
Sbjct: 357 DQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKAR 416
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAA 924
IL +HT W ++ + L +A + G+ GAD++ALCT+AA+IAL+R +P + A+
Sbjct: 417 KHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQ---IYAS 473
Query: 925 AEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKREAGIAAHDLVSSPL 974
+ K ++ + S + +D+ A+ + P S+R + H L SP+
Sbjct: 474 SHKL----QLDVSSIVLNAQDFYHAMQ-NIVPASQRAVMSSGHAL--SPI 516
Score = 70 (29.7 bits), Expect = 2.4e-76, Sum P(3) = 2.4e-76
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 1109 RVLISGSPGSGQR-HLAACLLHSFIGNVEIQKVDLATI 1145
R+L+SG GSGQ HLA LLH+ + + ++DL +
Sbjct: 606 RLLLSGERGSGQTSHLAPALLHT-LEKFSVHRLDLPAL 642
Score = 54 (24.1 bits), Expect = 2.4e-76, Sum P(3) = 2.4e-76
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 647 EDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDV 694
++E F +R+ K + R R P+ D SG L E + A L DV
Sbjct: 179 DEERFERRKSKSMARARNRCLPMNFRAEDLASGILRERVKVGASLADV 226
Score = 51 (23.0 bits), Expect = 4.9e-76, Sum P(3) = 4.9e-76
Identities = 32/140 (22%), Positives = 54/140 (38%)
Query: 25 KKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARNLELRRS-SRVRRAPV-------- 75
+ H + EEE ++ E ++ E NL R++ R + P+
Sbjct: 87 QNHHEVSTEGEEEESQEEDGDIEVEEAEGEENDRPYNLRQRKTVDRYQAPPIVPAHQKKR 146
Query: 76 ---LLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGR 132
L D+ SP ++ K ++ S SS E+ KS++ R R+R
Sbjct: 147 ENTLFDIHRSPARRSHIRRKKHAIH-SSDTTSSDEERFERRKSKSMA------RARNRCL 199
Query: 133 NVGFGAKSDESGHLSRRRKL 152
+ F A+ SG L R K+
Sbjct: 200 PMNFRAEDLASGILRERVKV 219
>UNIPROTKB|F1RR16 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 CTD:29028 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:CU582936 EMBL:CU469009
RefSeq:XP_001926065.4 UniGene:Ssc.23683 Ensembl:ENSSSCT00000006566
GeneID:100155780 KEGG:ssc:100155780 Uniprot:F1RR16
Length = 1388
Score = 758 (271.9 bits), Expect = 2.7e-76, Sum P(3) = 2.7e-76
Identities = 159/313 (50%), Positives = 215/313 (68%)
Query: 651 FLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEG--FESVAGLQDVIRCMKEVVILPLLY 708
F K E K +++D ++I +D D +L F+SV GL + I +KE+V+ PLLY
Sbjct: 388 FRKDELKGIYKDRMKIGASL---ADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLY 444
Query: 709 PEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGD 768
PE F+ + PPRG L +G PGTGKTLV RAL C++GDKR+A+F RKGADCL K+VG+
Sbjct: 445 PEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGE 504
Query: 769 AERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSV 828
+ERQLRLLF A + +PSIIFFDEIDGLAP R+ +QDQ HSS+VSTLLALMDGL SRG +
Sbjct: 505 SERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEI 564
Query: 829 VVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERW-PKPVTGSLLKWI 887
VVIGATNR +++DPALRRPGRFDRE F LP + R IL +HT W PKP+ L+ +
Sbjct: 565 VVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEILKIHTRDWNPKPLD-MFLEEL 623
Query: 888 AARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVEERDWL 947
A G+ GAD++++C++AA+ AL+R +P +I + + EK ++ L S + +D+
Sbjct: 624 AENCVGYCGADIKSICSEAALCALRRRYP--QIYTTS-EKL----QLDLSSITISAKDFE 676
Query: 948 EALSCSPPPCSKR 960
A+ P S+R
Sbjct: 677 VAMQ-KMIPASQR 688
Score = 62 (26.9 bits), Expect = 2.7e-76, Sum P(3) = 2.7e-76
Identities = 32/143 (22%), Positives = 59/143 (41%)
Query: 14 RDGSVSGPRLRKKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARNLELRRSSRVRRA 73
++GSV + + D +E+ ++ E +E+DDE + + + R R R+A
Sbjct: 238 QEGSVESSEEGEDQEDEDDGEDEDDEEDDEEDDEEDDEEDDEEDGEEDNQKRYYLRQRKA 297
Query: 74 PVLLDVSPSPVKKRRKMDKTVNLYVSKSLNSSR-RSAKEKDNEKSVSPGVWGSRLRS-RG 131
V +P++K R K N++ S + +R R +S R +
Sbjct: 298 TVYYQ---APLEKPRHQRKR-NIFYSGPASPARPRYRLSSAGPRSPYCKRMNRRRHAIHS 353
Query: 132 RNVGFGAKSDESGHLSRRRKLFR 154
+ + S++ H RRRK R
Sbjct: 354 SDSTSSSSSEDEQHFERRRKTSR 376
Score = 57 (25.1 bits), Expect = 2.7e-76, Sum P(3) = 2.7e-76
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 1109 RVLISGSPGSGQ-RHLAACLLHS 1130
R+LI G PG GQ HLA ++H+
Sbjct: 790 RMLIVGEPGFGQGSHLAPAVIHA 812
Score = 44 (20.5 bits), Expect = 2.1e-74, Sum P(3) = 2.1e-74
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 376 EHNEGEDHPDGGEHVRISTSEVKDGSSDHQKDD 408
E E ++ D GE + +D D ++DD
Sbjct: 246 EEGEDQEDEDDGEDEDDEEDDEEDDEEDDEEDD 278
Score = 41 (19.5 bits), Expect = 4.4e-74, Sum P(3) = 4.4e-74
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 375 GEHNEGEDHPDGGEHVRISTSEVKDGSSDHQKDDFL 410
GE + E+ + + + +DG D+QK +L
Sbjct: 257 GEDEDDEEDDEEDDEEDDEEDDEEDGEEDNQKRYYL 292
Score = 38 (18.4 bits), Expect = 9.0e-74, Sum P(3) = 9.0e-74
Identities = 19/71 (26%), Positives = 27/71 (38%)
Query: 125 SRLRSRGRNVGFGAKSDESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDLVVSKAEKLD 184
S R R R G +S ++RRR D + S E+ E S+ ++
Sbjct: 323 SPARPRYRLSSAGPRSPYCKRMNRRRHAIHSSDSTSSSSSEDEQHFERRRKT-SRNRAIN 381
Query: 185 RFKELNDLGDE 195
R LN DE
Sbjct: 382 RCLPLNFRKDE 392
>UNIPROTKB|Q9ULI0 [details] [associations]
symbol:ATAD2B "ATPase family AAA domain-containing protein
2B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
HOVERGEN:HBG080873 HOGENOM:HOG000034119 EMBL:AC009242 EMBL:AC066692
EMBL:AC079924 EMBL:AK094821 EMBL:AK131301 EMBL:AB033066
IPI:IPI00456004 IPI:IPI00739581 RefSeq:NP_001229267.1
RefSeq:NP_060022.1 UniGene:Hs.467862 PDB:2DKW PDB:3LXJ PDBsum:2DKW
PDBsum:3LXJ ProteinModelPortal:Q9ULI0 SMR:Q9ULI0 PhosphoSite:Q9ULI0
DMDM:296439432 PaxDb:Q9ULI0 PRIDE:Q9ULI0 Ensembl:ENST00000238789
GeneID:54454 KEGG:hsa:54454 UCSC:uc002rei.4 UCSC:uc002rek.4
CTD:54454 GeneCards:GC02M023971 HGNC:HGNC:29230 HPA:HPA034555
neXtProt:NX_Q9ULI0 PharmGKB:PA162377039 InParanoid:Q9ULI0
OMA:NAQDFYH OrthoDB:EOG49KFQ1 EvolutionaryTrace:Q9ULI0
GenomeRNAi:54454 NextBio:56685 ArrayExpress:Q9ULI0 Bgee:Q9ULI0
CleanEx:HS_ATAD2B Genevestigator:Q9ULI0 GermOnline:ENSG00000119778
GO:GO:0070577 InterPro:IPR018359 Uniprot:Q9ULI0
Length = 1458
Score = 752 (269.8 bits), Expect = 9.8e-76, Sum P(3) = 9.8e-76
Identities = 150/290 (51%), Positives = 203/290 (70%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+S+ GL I +KE+V+ PLLYPE F+ + PPRG L +G PGTGKTLV RAL C
Sbjct: 399 FDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANEC 458
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++GDK++A+F RKGADCL K+VG++ERQLRLLF A +PSIIFFDEIDGLAP R+ +Q
Sbjct: 459 SQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQ 518
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
DQ HSS+VSTLLALMDGL +RG +VVIGATNR +++DPALRRPGRFDRE F LP + R
Sbjct: 519 DQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKAR 578
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAA 924
IL +HT W ++ + L +A + G+ GAD++ALCT+AA+IAL+R +P + A+
Sbjct: 579 KHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQ---IYAS 635
Query: 925 AEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKREAGIAAHDLVSSPL 974
+ K ++ + S + +D+ A+ + P S+R + H L SP+
Sbjct: 636 SHKL----QLDVSSIVLSAQDFYHAMQ-NIVPASQRAVMSSGHAL--SPI 678
Score = 70 (29.7 bits), Expect = 9.8e-76, Sum P(3) = 9.8e-76
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 1109 RVLISGSPGSGQR-HLAACLLHSFIGNVEIQKVDLATI 1145
R+L+SG GSGQ HLA LLH+ + + ++DL +
Sbjct: 768 RLLLSGERGSGQTSHLAPALLHT-LERFSVHRLDLPAL 804
Score = 54 (24.1 bits), Expect = 9.8e-76, Sum P(3) = 9.8e-76
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 647 EDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDV 694
++E F +R+ K + R R P+ D SG L E + A L DV
Sbjct: 341 DEERFERRKSKSMARARNRCLPMNFRAEDLASGILRERVKVGASLADV 388
Score = 51 (23.0 bits), Expect = 2.0e-75, Sum P(3) = 2.0e-75
Identities = 32/140 (22%), Positives = 54/140 (38%)
Query: 25 KKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARNLELRRS-SRVRRAPV-------- 75
+ H + EEE ++ E ++ E NL R++ R + P+
Sbjct: 249 QNHHEVSTEGEEEESQEEDGDIEVEEAEGEENDRPYNLRQRKTVDRYQAPPIVPAHQKKR 308
Query: 76 ---LLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGR 132
L D+ SP ++ K ++ S SS E+ KS++ R R+R
Sbjct: 309 ENTLFDIHRSPARRSHIRRKKHAIH-SSDTTSSDEERFERRKSKSMA------RARNRCL 361
Query: 133 NVGFGAKSDESGHLSRRRKL 152
+ F A+ SG L R K+
Sbjct: 362 PMNFRAEDLASGILRERVKV 381
>UNIPROTKB|E2RRW1 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
CTD:29028 OMA:PSVYENG GeneTree:ENSGT00550000074694
EMBL:AAEX03008783 RefSeq:XP_850520.1 ProteinModelPortal:E2RRW1
Ensembl:ENSCAFT00000001534 GeneID:475090 KEGG:cfa:475090
Uniprot:E2RRW1
Length = 1373
Score = 755 (270.8 bits), Expect = 1.3e-75, Sum P(3) = 1.3e-75
Identities = 154/302 (50%), Positives = 205/302 (67%)
Query: 651 FLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEG--FESVAGLQDVIRCMKEVVILPLLY 708
F K E K +++D ++I +D D +L F+SV GL + I +KE+V+ PLLY
Sbjct: 372 FRKDELKGIYKDRMKIGASL---ADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLY 428
Query: 709 PEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGD 768
PE F+ + PPRG L +G PGTGKTLV RAL C++GDKR+A+F RKGADCL K+VG+
Sbjct: 429 PEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGE 488
Query: 769 AERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSV 828
+ERQLRLLF A + +PSIIFFDEIDGLAP R+ +QDQ HSS+VSTLLALMDGL SRG +
Sbjct: 489 SERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEI 548
Query: 829 VVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERW-PKPVTGSLLKWI 887
VVIGATNR +++DPALRRPGRFDRE F LP + R IL +HT W PKP+ L+ +
Sbjct: 549 VVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEILKIHTRDWNPKPLD-IFLEEL 607
Query: 888 AARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVEERDWL 947
A G+ GAD++++C++AA+ AL+R +P S + S ++ F V + +
Sbjct: 608 AENCVGYCGADIKSICSEAALCALRRRYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMI 667
Query: 948 EA 949
A
Sbjct: 668 PA 669
Score = 59 (25.8 bits), Expect = 1.3e-75, Sum P(3) = 1.3e-75
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 1109 RVLISGSPGSGQ-RHLAACLLHS 1130
R+LI G PG GQ HLA ++H+
Sbjct: 774 RILIVGEPGFGQGSHLAPAVIHA 796
Score = 57 (25.1 bits), Expect = 1.3e-75, Sum P(3) = 1.3e-75
Identities = 31/121 (25%), Positives = 50/121 (41%)
Query: 36 EEYAKNHGEPNEDDDEAAETGSAARNLELRRSSRVRRAPVLLDVSPSPVKKRRKMDKTVN 95
E+ + GE +DDDE E G + + R R R+A V +P++K R K N
Sbjct: 248 EDQEDDDGEDEDDDDE--EDGE--EDNQKRYYLRQRKATVYYQ---APLEKPRHQRKP-N 299
Query: 96 LYVSKSLNSSR-RSAKEKDNEKSVSPGVWGSRLRS-RGRNVGFGAKSDESGHLSRRRKLF 153
++ S + +R R +S R + + + S++ H RRRK
Sbjct: 300 IFYSGPASPARPRYRLSSAGPRSPYCKRMNRRRHAIHSSDSTSSSSSEDEQHFERRRKRS 359
Query: 154 R 154
R
Sbjct: 360 R 360
Score = 47 (21.6 bits), Expect = 1.5e-74, Sum P(3) = 1.5e-74
Identities = 45/200 (22%), Positives = 79/200 (39%)
Query: 52 AAETGSAARNLELRRSSRVRRA--PVLLDVSPSPVKKRRKM-DKTVNL-YVSKSLNSSRR 107
A+ GS+ + +E +R R+ + S S K ++ +K N + ++ L +
Sbjct: 54 ASGDGSSVKEVETYHRTRASRSLRKNAQNSSDSSFDKNMEITEKHSNRRHFTRQLARQQA 113
Query: 108 SAKEKD-NEKSVSPGVWGSRLRSRGRNVGFGAKSDESGHLSRRRKL-FREMDEDAESEVG 165
K+++ E V P V S LR+R +E+G + RR R V
Sbjct: 114 DKKKEECKEDKVIP-VTRS-LRTRNIVQTKEHLHEENGDIEVRRSCRIRSRYSSVNQSVL 171
Query: 166 MEKG-SEGGDLVVSKAEKL-----DRFKELNDLGDEPEKSGQXXXXXXXXXXVGTRGMKE 219
+K + + V+ K + + R +EL DLG E + G + E
Sbjct: 172 FDKLITNTAEAVLQKMDDMKKMRRQRMRELEDLGVFNETEEENLNVYTRGKQKGIQRTDE 231
Query: 220 ESGRGEELEVVRNER-EDSK 238
E+ +E V +E ED +
Sbjct: 232 ETTDNQEGSVESSEEGEDQE 251
>UNIPROTKB|G4N7L8 [details] [associations]
symbol:MGG_06380 "ATPase family AAA domain-containing
protein 2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0017111 EMBL:CM001234
RefSeq:XP_003717194.1 EnsemblFungi:MGG_06380T0 GeneID:2684535
KEGG:mgr:MGG_06380 Uniprot:G4N7L8
Length = 1706
Score = 725 (260.3 bits), Expect = 1.7e-75, Sum P(3) = 1.7e-75
Identities = 150/292 (51%), Positives = 200/292 (68%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F V GLQ I +KE+++LPLLYPE F +TPPRGVL HG PGTGKTL+ RAL +
Sbjct: 619 FSKVGGLQGHIDQLKEMIMLPLLYPELFQRYKVTPPRGVLFHGPPGTGKTLLARALSNAV 678
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
G ++I ++ RKGAD L K+VG+AE+QLRLLF+ A + QPSIIFFDEIDGLAP R+ +Q
Sbjct: 679 GIGGRKITFYMRKGADALSKWVGEAEKQLRLLFEEARRTQPSIIFFDEIDGLAPVRSSKQ 738
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
+Q H+S+VSTLLALMDG+ RG V+VIGATNRP++VDPALRRPGRFDRE YFPLP +E R
Sbjct: 739 EQIHASIVSTLLALMDGMDGRGQVIVIGATNRPDSVDPALRRPGRFDREFYFPLPDVEGR 798
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAA 924
+I+ +HT+ W + +A +T G+ GADL+ALCT+AA+ +++R +P +I S+
Sbjct: 799 RSIIDIHTKDWG--LADDFKDSLARQTKGYGGADLRALCTEAALNSIQRTYP--QIYSST 854
Query: 925 AEKAFCSKRVTLPS-FAVEERDWLEALSCSPPPCSKREAGIAAHDLVSSPLP 975
K + P+ ++ D+ + P S+R A AA L S P
Sbjct: 855 ------DKLIVDPNKVSIHATDFTIVMK-KIIPSSQRSASSAAAPLPPSIEP 899
Score = 97 (39.2 bits), Expect = 1.7e-75, Sum P(3) = 1.7e-75
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 1109 RVLISGSPGSGQRHLAACLLHSFIGNVEIQKVDLATISQEG 1149
R+LI+G PG+GQ +++A LLH G V +Q DLAT+ +G
Sbjct: 958 RLLIAGRPGNGQEYISAALLHHLEG-VFVQNFDLATLLADG 997
Score = 64 (27.6 bits), Expect = 1.7e-75, Sum P(3) = 1.7e-75
Identities = 28/84 (33%), Positives = 40/84 (47%)
Query: 48 DDDEAAETGSAARNLE-LRRSSRV----RRAPVLLDVSPSPVKKRRKMDKTVNLYVSKSL 102
D+D + A LE LR+SSR RR+P + P KRR++ K V+ Y K L
Sbjct: 425 DEDVELDQDELAEELEELRQSSRAARRRRRSPSI--AYEEPRTKRRRVTKPVD-YSIKPL 481
Query: 103 NSSRRSAKEKDNEKSVSPGVWGSR 126
+ +E+D S + G G R
Sbjct: 482 DQLV-DQEEEDPAPSPAKGRRGGR 504
Score = 62 (26.9 bits), Expect = 2.8e-75, Sum P(3) = 2.8e-75
Identities = 29/121 (23%), Positives = 47/121 (38%)
Query: 44 EPNEDDDEAAETGSAARNLELRRSSRVRRA--PVLLDVSPSPVKKRRKMDKTVNLYVSKS 101
E NED++E + + + RRS R ++A D P + D + + S
Sbjct: 329 ETNEDENENESEAAPSNTRKTRRSLRPKKALNEPSSDFEPGDDSGEGEGDVSAS---EAS 385
Query: 102 LNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFGAKSDESGHLSRRRKLFREMDEDAE 161
RRS +D++ G G R R DE L + +L E++E +
Sbjct: 386 PKKGRRSRASQDDDGDEEFGARGRRGTQGKRGANRRGSGDEDVELDQD-ELAEELEELRQ 444
Query: 162 S 162
S
Sbjct: 445 S 445
Score = 54 (24.1 bits), Expect = 1.9e-74, Sum P(3) = 1.9e-74
Identities = 37/183 (20%), Positives = 71/183 (38%)
Query: 27 HKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARNLELRRSSRV-------RRAPVLLDV 79
H+ D EE G+ +++D++++ + E + S++ R V
Sbjct: 108 HESSDEDSEEIEETTDGDEDDEDEDSSAPKRNKKVAEKSKPSKIVTLKVPSGRGKVKEPP 167
Query: 80 SPSPVKKR-RKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFGA 138
+PS +R R + N ++ S S R + + + +S SP G R+ G
Sbjct: 168 TPSVATRRTRAHTEEANEFLELS-ESGRHARTTRASTRSKSPEALGRATRATKGLKGL-R 225
Query: 139 KSDESGHLSRRRKLFREMDEDAESEVGMEKGSE--GGDLVVSKAEKLDRFKELNDLGDEP 196
K E + + +E D+ E G + ++ G+ K D E GD P
Sbjct: 226 KQPEPIEEATQENSAQERDQPDEVMAGADGAADELAGEQPEGSGVKGDEEAERMG-GDVP 284
Query: 197 EKS 199
+++
Sbjct: 285 QET 287
Score = 48 (22.0 bits), Expect = 8.2e-74, Sum P(3) = 8.2e-74
Identities = 24/98 (24%), Positives = 39/98 (39%)
Query: 148 RRRKLFREMDEDAESEVGMEKGSEGGDLVVSKAE-KLDRFKELNDLGDEPEKSGQXXXXX 206
R +K E D E G + G GD+ S+A K R + D E+ G
Sbjct: 354 RPKKALNEPSSDFEP--GDDSGEGEGDVSASEASPKKGRRSRASQDDDGDEEFGARGRRG 411
Query: 207 XXXXXVGTRGMKEESGRGEELEVVRNE-REDSKTIPES 243
G RG E++E+ ++E E+ + + +S
Sbjct: 412 TQ----GKRGANRRGSGDEDVELDQDELAEELEELRQS 445
Score = 40 (19.1 bits), Expect = 5.6e-73, Sum P(3) = 5.6e-73
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 634 DMEAEEKWLENCGEDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFE 683
D + +E + ++ EDE+ G R R Y SD DS ++ E
Sbjct: 71 DSDPDEAFDDDEDEDEDMPVNAGGRRTRKAAVKRQNYHESSDEDSEEIEE 120
Score = 40 (19.1 bits), Expect = 5.6e-73, Sum P(3) = 5.6e-73
Identities = 31/144 (21%), Positives = 58/144 (40%)
Query: 35 EEEYAKNH--GEPNEDDDEAAETGSAARNLELRRSSRVRRAPVLLDVSPSPVKKRRKMDK 92
+E++ +N G+ ++DDD+ ++ + R +R RA P + ++
Sbjct: 291 DEQHVENTAAGDVDDDDDD---------DVPVTRRTRGLRA-----AKPQVDETNEDENE 336
Query: 93 TVNLYVSKSLNSSRRSAKEKD--NEKS--VSPGVWGSRLRSRGRNVGFGAKSDESGHLSR 148
+ + +RRS + K NE S PG G G + S+ S R
Sbjct: 337 NESEAAPSNTRKTRRSLRPKKALNEPSSDFEPG------DDSGEGEGDVSASEASPKKGR 390
Query: 149 RRKLFREMDEDAESEVGMEKGSEG 172
R + ++ D D E +G++G
Sbjct: 391 RSRASQDDDGDEEFGARGRRGTQG 414
Score = 37 (18.1 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 235 EDSKTIPESVVGNEGEDSK 253
EDS+ I E+ G+E ++ +
Sbjct: 113 EDSEEIEETTDGDEDDEDE 131
Score = 37 (18.1 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 396 EVKDGSSDHQKDDFLAMLEEKPVECENAP 424
E DG D + +D A K V ++ P
Sbjct: 120 ETTDGDEDDEDEDSSAPKRNKKVAEKSKP 148
>UNIPROTKB|E1BC78 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:DAAA02038173 EMBL:DAAA02038174
IPI:IPI00923885 Ensembl:ENSBTAT00000061524 Uniprot:E1BC78
Length = 1372
Score = 757 (271.5 bits), Expect = 2.0e-75, Sum P(4) = 2.0e-75
Identities = 154/302 (50%), Positives = 206/302 (68%)
Query: 651 FLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEG--FESVAGLQDVIRCMKEVVILPLLY 708
F K E K +++D ++I +D D +L F+SV GL + I +KE+V+ PLLY
Sbjct: 378 FRKDELKGIYKDRMKIGASL---ADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLY 434
Query: 709 PEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGD 768
PE F+ + PPRG L +G PGTGKTLV RAL C++GDKR+A+F RKGADCL K+VG+
Sbjct: 435 PEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGE 494
Query: 769 AERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSV 828
+ERQLRLLF A + +PSIIFFDEIDGLAP R+ +QDQ HSS+VSTLLALMDGL SRG +
Sbjct: 495 SERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEI 554
Query: 829 VVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERW-PKPVTGSLLKWI 887
VVIGATNR +++DPALRRPGRFDRE F LP + R IL +HT W PKP+ L+ +
Sbjct: 555 VVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEILKIHTRDWNPKPLD-MFLEEL 613
Query: 888 AARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVEERDWL 947
A + G+ GAD++++C++AA+ AL+R +P S + S ++ F V + +
Sbjct: 614 AENSVGYCGADIKSVCSEAALCALRRRYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMI 673
Query: 948 EA 949
A
Sbjct: 674 PA 675
Score = 57 (25.1 bits), Expect = 2.0e-75, Sum P(4) = 2.0e-75
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 1109 RVLISGSPGSGQ-RHLAACLLHS 1130
R+LI G PG GQ HLA ++H+
Sbjct: 780 RMLIVGEPGFGQGSHLAPAVIHA 802
Score = 47 (21.6 bits), Expect = 2.0e-75, Sum P(4) = 2.0e-75
Identities = 21/85 (24%), Positives = 32/85 (37%)
Query: 375 GEHNEGEDHPDGGEHVRISTSEVKDGSSDHQKDDFLAMLE-----EKPVEC---ENAPKV 426
GE E ED D E + +D D+QK +L + + P+E + PK+
Sbjct: 247 GEDQEDEDEDDEEEEDDDDDEDEEDVEEDNQKRYYLRQRKATVYYQAPLEKPRHQRKPKI 306
Query: 427 DAFNPGSDSTLGWPRIKQGRRCGLC 451
P S + + G R C
Sbjct: 307 FYTGPASPARPRYRLSSAGPRSPYC 331
Score = 46 (21.3 bits), Expect = 6.5e-75, Sum P(4) = 6.5e-75
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 35 EEEYAKNHGEPNEDDDEAAETGSAARNLELRRSSRVRRAPVLLDVSPSPVKKRRKMDKTV 94
E+E + E ++DDDE E + + R R R+A V +P++K R K
Sbjct: 251 EDEDEDDEEEEDDDDDEDEE--DVEEDNQKRYYLRQRKATVYYQ---APLEKPRHQRKPK 305
Query: 95 NLY 97
Y
Sbjct: 306 IFY 308
Score = 42 (19.8 bits), Expect = 2.0e-75, Sum P(4) = 2.0e-75
Identities = 17/82 (20%), Positives = 32/82 (39%)
Query: 84 VKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFGAKSDES 143
++ R + KT +L+ RRS + + SV+ V +L + D
Sbjct: 132 LRTRSIVQKTEHLHEESGDVEVRRSCRIRSRYGSVNQSVLFDKLITNTAEAVLQKMDDME 191
Query: 144 GHLSRRRKLFREMDEDAESEVG 165
RR + +++ E+E G
Sbjct: 192 KQRRRRMRKLEDLEVFNETEEG 213
Score = 40 (19.1 bits), Expect = 1.1e-74, Sum P(4) = 1.1e-74
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 621 MEIRKLSNDAWRKDMEAEEKWLENCGEDEEFLKREGKRLHRDLLRIAPVY 670
+E + D +D + EE+ ++ EDEE ++ + ++ + R A VY
Sbjct: 241 VESSEEGEDQEDEDEDDEEEEDDDDDEDEEDVEEDNQKRYYLRQRKATVY 290
Score = 38 (18.4 bits), Expect = 6.5e-75, Sum P(4) = 6.5e-75
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 305 TTEKSDKERMQFEDRDERENHQ 326
T+ S ++ QFE R +R ++
Sbjct: 347 TSSSSSEDEQQFERRRKRSRNR 368
Score = 37 (18.1 bits), Expect = 5.7e-74, Sum P(4) = 5.7e-74
Identities = 20/85 (23%), Positives = 27/85 (31%)
Query: 78 DVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFG 137
DV K+ + +Y L R K K P S R R R G
Sbjct: 271 DVEEDNQKRYYLRQRKATVYYQAPLEKPRHQRKPKIFY--TGPA---SPARPRYRLSSAG 325
Query: 138 AKSDESGHLSRRRKLFREMDEDAES 162
+S ++RRR D + S
Sbjct: 326 PRSPYCKRMNRRRHAIHSSDSTSSS 350
>UNIPROTKB|Q6PL18 [details] [associations]
symbol:ATAD2 "ATPase family AAA domain-containing protein
2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006355 GO:GO:0006200 GO:GO:0006351
GO:GO:0016887 eggNOG:COG0464 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 EMBL:AY598335 EMBL:CR749832 EMBL:AL833653
EMBL:BC010686 EMBL:BC019909 EMBL:BC113656 EMBL:AK097133
EMBL:AF118088 IPI:IPI00170548 IPI:IPI00470801 RefSeq:NP_054828.2
UniGene:Hs.370834 PDB:3DAI PDBsum:3DAI ProteinModelPortal:Q6PL18
SMR:Q6PL18 DIP:DIP-46197N STRING:Q6PL18 PhosphoSite:Q6PL18
DMDM:74762365 PaxDb:Q6PL18 PRIDE:Q6PL18 DNASU:29028
Ensembl:ENST00000287394 GeneID:29028 KEGG:hsa:29028 UCSC:uc003yqh.4
CTD:29028 GeneCards:GC08M124401 H-InvDB:HIX0007764 HGNC:HGNC:30123
HPA:CAB056158 HPA:HPA019860 HPA:HPA029424 MIM:611941
neXtProt:NX_Q6PL18 PharmGKB:PA134895566 HOVERGEN:HBG080873
InParanoid:Q6PL18 OMA:PSVYENG OrthoDB:EOG441Q9S PhylomeDB:Q6PL18
ChiTaRS:ATAD2 EvolutionaryTrace:Q6PL18 GenomeRNAi:29028
NextBio:51959 ArrayExpress:Q6PL18 Bgee:Q6PL18 CleanEx:HS_ATAD2
Genevestigator:Q6PL18 GermOnline:ENSG00000156802 Uniprot:Q6PL18
Length = 1390
Score = 760 (272.6 bits), Expect = 2.0e-75, Sum P(3) = 2.0e-75
Identities = 155/302 (51%), Positives = 205/302 (67%)
Query: 651 FLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEG--FESVAGLQDVIRCMKEVVILPLLY 708
F K E K +++D ++I +D D +L F+SV GL + I +KE+V+ PLLY
Sbjct: 392 FRKDELKGIYKDRMKIGASL---ADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLY 448
Query: 709 PEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGD 768
PE F+ + PPRG L +G PGTGKTLV RAL C++GDKR+A+F RKGADCL K+VG+
Sbjct: 449 PEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGE 508
Query: 769 AERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSV 828
+ERQLRLLF A + +PSIIFFDEIDGLAP R+ +QDQ HSS+VSTLLALMDGL SRG +
Sbjct: 509 SERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEI 568
Query: 829 VVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERW-PKPVTGSLLKWI 887
VVIGATNR +++DPALRRPGRFDRE F LP E R IL +HT W PKP+ + L+ +
Sbjct: 569 VVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLD-TFLEEL 627
Query: 888 AARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVEERDWL 947
A G+ GAD++++C +AA+ AL+R +P S + S ++ F V + +
Sbjct: 628 AENCVGYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMI 687
Query: 948 EA 949
A
Sbjct: 688 PA 689
Score = 59 (25.8 bits), Expect = 2.0e-75, Sum P(3) = 2.0e-75
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 1109 RVLISGSPGSGQ-RHLAACLLHS 1130
R+LI G PG GQ HLA ++H+
Sbjct: 794 RILIVGEPGFGQGSHLAPAVIHA 816
Score = 49 (22.3 bits), Expect = 2.0e-75, Sum P(3) = 2.0e-75
Identities = 27/113 (23%), Positives = 46/113 (40%)
Query: 44 EPNEDDDEAAETGSAARNLELRRSSRVRRAPVLLDVSPSPVKKRRKMDKTVNLYVSKSLN 103
+ +++DDE E G + R R R+A V +P++K R K N++ S +
Sbjct: 274 DDDDEDDEDEEDGEEEN--QKRYYLRQRKATVYYQ---APLEKPRHQRKP-NIFYSGPAS 327
Query: 104 SSR-RSAKEKDNEKSVSPGVWGSRLRS-RGRNVGFGAKSDESGHLSRRRKLFR 154
+R R +S R + + + S++ H RRRK R
Sbjct: 328 PARPRYRLSSAGPRSPYCKRMNRRRHAIHSSDSTSSSSSEDEQHFERRRKRSR 380
Score = 43 (20.2 bits), Expect = 8.4e-75, Sum P(3) = 8.4e-75
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 376 EHNEGEDHPDGGEHVRISTSEVKDGSSDHQKDD 408
E E ++H D GE E D D DD
Sbjct: 246 EEGEDQEHEDDGED---EDDEDDDDDDDDDDDD 275
Score = 42 (19.8 bits), Expect = 1.1e-74, Sum P(3) = 1.1e-74
Identities = 23/75 (30%), Positives = 33/75 (44%)
Query: 179 KAEKLDRFKELNDLG--DEPEKSGQXXXXXXXXXXVGTRGMKEESGRGEELEVVRNERED 236
K + R +EL DLG +E E+S + TRG +++ R +E E N+ E
Sbjct: 192 KKMRRQRMRELEDLGVFNETEESN---------LNMYTRGKQKDIQRTDE-ETTDNQ-EG 240
Query: 237 SKTIPESVVGNEGED 251
S E E ED
Sbjct: 241 SVESSEEGEDQEHED 255
Score = 39 (18.8 bits), Expect = 2.2e-74, Sum P(3) = 2.2e-74
Identities = 24/104 (23%), Positives = 39/104 (37%)
Query: 44 EPNEDDDEAAETGSAARNLELRRSS----------RVRRAPVLLDVSP-SPVKKRRKMDK 92
E +ED+++ E L R+++ R +R P + P SP + R ++
Sbjct: 278 EDDEDEEDGEEENQKRYYLRQRKATVYYQAPLEKPRHQRKPNIFYSGPASPARPRYRLSS 337
Query: 93 T-VNLYVSKSLNSSRRSAKEKDNEKSVSPG--VWGSRLRSRGRN 133
K +N R + D+ S S R R R RN
Sbjct: 338 AGPRSPYCKRMNRRRHAIHSSDSTSSSSSEDEQHFERRRKRSRN 381
>ZFIN|ZDB-GENE-110411-210 [details] [associations]
symbol:atad2b "ATPase family, AAA domain containing
2B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-110411-210 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01035125
EMBL:CABZ01035126 EMBL:CABZ01035127 EMBL:CABZ01035128
EMBL:CABZ01035129 EMBL:CABZ01035130 EMBL:CABZ01035131
EMBL:CABZ01035132 EMBL:CABZ01035133 EMBL:CABZ01035134
EMBL:CABZ01035135 EMBL:CABZ01035136 EMBL:CABZ01035137
EMBL:CABZ01035138 EMBL:FP103080 IPI:IPI00504895
Ensembl:ENSDART00000085416 ArrayExpress:E7FE14 Bgee:E7FE14
Uniprot:E7FE14
Length = 1402
Score = 729 (261.7 bits), Expect = 5.4e-75, Sum P(4) = 5.4e-75
Identities = 136/232 (58%), Positives = 175/232 (75%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+SV GL I+ +KE+V+ PLLYP+ F+ + PPRG L +G PGTGKTLV RAL C
Sbjct: 394 FDSVGGLTHHIQSLKEMVVFPLLYPQVFEKFKIQPPRGCLFYGPPGTGKTLVARALANEC 453
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++GD+++++F RKGADCL K+VG++ERQLRLLF A +PSIIFFDEIDGLAP R+ +Q
Sbjct: 454 SQGDRKVSFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQ 513
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
DQ HSS+VSTLLALMDGL SRG +VVIGATNR +++DPALRRPGRFDRE F LP + R
Sbjct: 514 DQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDKKAR 573
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFP 916
IL +HT W + + +A R G+ GAD++ALCT+AA+ AL+R +P
Sbjct: 574 KHILEIHTRDWSPKLAEPFIDELAERCVGYCGADIKALCTEAALAALRRRYP 625
Score = 66 (28.3 bits), Expect = 5.4e-75, Sum P(4) = 5.4e-75
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 1109 RVLISGSPGSGQR-HLAACLLHSFIGNVEIQKVDLATI 1145
R+L++G G+GQ HLA LLH + + ++DL T+
Sbjct: 766 RLLLTGPQGAGQSTHLAPALLHH-LEKFTVHRLDLPTL 802
Score = 62 (26.9 bits), Expect = 2.9e-73, Sum P(3) = 2.9e-73
Identities = 40/156 (25%), Positives = 66/156 (42%)
Query: 35 EEEYAKNHGEPNEDDDEAAETGSAA-RNLELRRSSRVRR------APV--------LLDV 79
+E+ + + +++ DEA E G R LR+ V+R PV L D
Sbjct: 250 DEDVEADDDDEDDEGDEAEEAGEENDRPYNLRQRKTVQRYEAPPIEPVNRKQSKGSLFDT 309
Query: 80 SPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFGAK 139
SP ++ K ++ S+S +SS E+ KS+S R R+R + A+
Sbjct: 310 HRSPARRSHIRIKKHAIHSSESTSSSDEERFERRKSKSMS------RARNRCLPMNLRAE 363
Query: 140 SDESGHLSRRRKLFREM-DEDAES-EVGMEKGSEGG 173
SG L R K+ + D D + + ++ S GG
Sbjct: 364 DLASGVLRDRVKVGASLADVDPMNLDTSVKFDSVGG 399
Score = 61 (26.5 bits), Expect = 5.4e-75, Sum P(4) = 5.4e-75
Identities = 44/169 (26%), Positives = 76/169 (44%)
Query: 43 GEPNEDDDEAAETGSAARNLELRRSSRVRRAP-------VLLD--VSPSPVKKRRKMDKT 93
G+ D A G ++EL+RS RVR++ +L D V+ + ++MD
Sbjct: 124 GDSTSGGDHARMNG----HVELKRSRRVRKSQFEHLNQSLLFDQLVNSTAEAVLQEMDNI 179
Query: 94 VNLYVSKSLNSSRR-SAKEKDNEKSVSPGVWGSRLRSRGRNVGFGAKSDESGHLSRRRKL 152
++ S+ + R + E +N S R +S RN +G +S H K+
Sbjct: 180 SSIRQSREVERLRMWTDTELENMDMYSRV---KRRKSLRRNT-YGMQS----H----HKV 227
Query: 153 FREMDEDAESEVGMEKGSEGGDLVVSKAEKLDRFKELNDLGDEPEKSGQ 201
+ +D E E G E+ +E G+ + + D E +D GDE E++G+
Sbjct: 228 MSK-SKDPEEEEGTEESNEEGE--EDEDVEADDDDE-DDEGDEAEEAGE 272
Score = 55 (24.4 bits), Expect = 5.4e-75, Sum P(4) = 5.4e-75
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 647 EDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDV 694
++E F +R+ K + R R P+ + D SG L + + A L DV
Sbjct: 336 DEERFERRKSKSMSRARNRCLPMNLRAEDLASGVLRDRVKVGASLADV 383
Score = 55 (24.4 bits), Expect = 2.3e-74, Sum P(4) = 2.3e-74
Identities = 32/141 (22%), Positives = 57/141 (40%)
Query: 10 SPKKRDGSVSGPRLRKKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARNLELRRSSR 69
S + R + P L + + R+ E A + +P E +A S+ R + +R
Sbjct: 18 SGRTRSSQRNNPNLDEHNSRVRKR-ETPAAYSLRQPKEPSSDA--NSSSPRLSPPPKRTR 74
Query: 70 VRRAPVLLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRS 129
+ P D SPSP K ++ T+ S + +R S N ++ R+
Sbjct: 75 RQTPPSSTDTSPSPQSKGQRGSWTM------SKHCTRLSTGALQNGHTIG------RMSL 122
Query: 130 RGRNVGFGAKSDESGHLSRRR 150
RG + G + +GH+ +R
Sbjct: 123 RGDSTSGGDHARMNGHVELKR 143
Score = 45 (20.9 bits), Expect = 8.4e-73, Sum P(4) = 8.4e-73
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 1042 DIAKEIERRLQYA-GIITGEASFSGLDAFAGDSNDDCANSKPSIAHSYGINCSLLQNISC 1100
+I ++ RR + GII + S+ +A D ++ ++ S + G C L SC
Sbjct: 1124 NIKRKFRRRPIWGRGIIRKKKSYKKEEAEEDDEPEEEEGAEDSTVMAQGDACLTLDESSC 1183
Score = 40 (19.1 bits), Expect = 8.4e-73, Sum P(4) = 8.4e-73
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 375 GEHNEGEDHPDGGEHVRISTSE-VKDGSSDHQKDDFL 410
G+ G DH HV + S V+ +H L
Sbjct: 124 GDSTSGGDHARMNGHVELKRSRRVRKSQFEHLNQSLL 160
>UNIPROTKB|E9PSU0 [details] [associations]
symbol:LOC500625 "Protein LOC500625" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 RGD:1566199 IPI:IPI00476926
Ensembl:ENSRNOT00000006877 ArrayExpress:E9PSU0 Uniprot:E9PSU0
Length = 1458
Score = 744 (267.0 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 146/276 (52%), Positives = 196/276 (71%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+S+ GL I +KE+V+ PLLYPE F+ + PPRG L +G PGTGKTLV RAL C
Sbjct: 396 FDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANEC 455
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++GDK++A+F RKGADCL K+VG++ERQLRLLF A +PSIIFFDEIDGLAP R+ +Q
Sbjct: 456 SQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQ 515
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
DQ HSS+VSTLLALMDGL +RG +VVIGATNR +++DPALRRPGRFDRE F LP R
Sbjct: 516 DQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQRAR 575
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAA 924
IL +HT W ++ + L +A + G+ GAD++ALCT+AA+IAL+R +P + A+
Sbjct: 576 KHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQ---IYAS 632
Query: 925 AEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKR 960
+ K ++ + S + +D+ A+ + P S+R
Sbjct: 633 SHKL----QLDVSSIVLSAQDFYRAMQ-NIVPASQR 663
Score = 70 (29.7 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 1109 RVLISGSPGSGQR-HLAACLLHSFIGNVEIQKVDLATI 1145
R+L+SG GSGQ HLA LLH+ + + ++DL +
Sbjct: 769 RLLLSGERGSGQTSHLAPALLHT-LERFSVHRLDLPAL 805
Score = 54 (24.1 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 647 EDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDV 694
++E F +R+ K + R R P+ D SG L E + A L DV
Sbjct: 338 DEERFERRKSKSMARARNRCLPMNFRAEDLASGILRERVKVGASLADV 385
Score = 51 (23.0 bits), Expect = 2.5e-74, Sum P(3) = 2.5e-74
Identities = 32/140 (22%), Positives = 54/140 (38%)
Query: 25 KKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARNLELRRS-SRVRRAPV-------- 75
+ H + EEE ++ E ++ E NL R++ R + P+
Sbjct: 246 QNHHEVSTEGEEEESQEEDGDIEVEEAEGEENDRPYNLRQRKTVDRYQAPPIVPAHQKKR 305
Query: 76 ---LLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGR 132
L D+ SP ++ K ++ S SS E+ KS++ R R+R
Sbjct: 306 ENTLFDIHRSPARRSHIRRKKHAIH-SSDTTSSDEERFERRKSKSMA------RARNRCL 358
Query: 133 NVGFGAKSDESGHLSRRRKL 152
+ F A+ SG L R K+
Sbjct: 359 PMNFRAEDLASGILRERVKV 378
>TAIR|locus:2198748 [details] [associations]
symbol:AT1G05910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
EMBL:CP002684 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC009999
OMA:QDETENG EMBL:AY056785 EMBL:BT002728 IPI:IPI00523133
IPI:IPI00542285 PIR:B86194 RefSeq:NP_563753.1 UniGene:At.26297
ProteinModelPortal:F4IAE9 SMR:F4IAE9 PRIDE:F4IAE9
EnsemblPlants:AT1G05910.1 GeneID:837101 KEGG:ath:AT1G05910
GeneFarm:1906 TAIR:At1g05910 HOGENOM:HOG000030246 Uniprot:F4IAE9
Length = 1210
Score = 731 (262.4 bits), Expect = 3.9e-74, Sum P(4) = 3.9e-74
Identities = 154/306 (50%), Positives = 211/306 (68%)
Query: 672 GGSDSDSGKLFE--GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHP 729
GG+D ++ E F+ + GL + I +KE+V PLLYPEFF + +TPPRGVLL G P
Sbjct: 365 GGADIQPLQINEDINFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPP 424
Query: 730 GTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIF 789
GTGKTL+ RAL + ++ ++++++ RKGAD L K+VG+AERQL+LLF+ A++ QPSIIF
Sbjct: 425 GTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIF 484
Query: 790 FDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGR 849
FDEIDGLAP R+ +Q+Q H+S+VSTLLALMDGL SRG VV+IGATNR +A+D ALRRPGR
Sbjct: 485 FDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGR 544
Query: 850 FDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAII 909
FDRE F LP E RA IL +HT +W P T L + +AA G+ GADL+ALCT+AAI
Sbjct: 545 FDREFNFSLPGCEARAEILDIHTRKWKHPPTRELKEELAATCVGYCGADLKALCTEAAIR 604
Query: 910 ALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKREAGIAAHDL 969
A + +P ++ ++ + A V L + VE+ ++EA+S P + R + + + L
Sbjct: 605 AFREKYP--QVYTSDDKYAI---DVGLVN--VEKSHFVEAMSAITP-AAHRGSVVQSRPL 656
Query: 970 VSSPLP 975
LP
Sbjct: 657 SPVVLP 662
Score = 69 (29.3 bits), Expect = 3.9e-74, Sum P(4) = 3.9e-74
Identities = 42/144 (29%), Positives = 65/144 (45%)
Query: 63 ELRRSSRVRRAPVLLD--VSPSPVKKRRKMD---KTVNLYVSKSLNSSRRSAKEKDNEKS 117
+LRRS+R RR V L+ S + M +T+ V K+ ++S+ S K+ D E
Sbjct: 81 DLRRSTRKRRISVNLEDYTDSSGAEDEDMMSPAYRTLRRRVHKNFSTSK-SRKDMDAE-- 137
Query: 118 VSPGVWGSRLRSRGRNVGFGAKSDESGHLSRRRKLFREMDEDAESEVGME-KGSEGGDLV 176
++P G R R R + ESG + E D E+E G E ++ G+
Sbjct: 138 LAPRREGLRPR-RSTTIANKRLKTESG---ADQDTSEEKDGQDETENGNELDDADDGENE 193
Query: 177 VSKAEKLDRFKELNDLGDEPEKSG 200
V +AE ++ D DE E+ G
Sbjct: 194 V-EAEDEGNGEDEGDGEDEGEEDG 216
Score = 66 (28.3 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 30/140 (21%), Positives = 53/140 (37%)
Query: 35 EEEYAKNHGEPNEDDDEAAETGSAARN-LELRRSSRVRRAPV-LLDVSPSPVKKRRKMDK 92
+E ++ GE + DDDE + R +LR + VRR P ++ P RR + +
Sbjct: 204 DEGDGEDEGEEDGDDDEEGDEEQEGRKRYDLRNRAEVRRMPTGEINKQQQPRSPRRVLHQ 263
Query: 93 TVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFGAKSDESGHLSRRRKL 152
+ V + + R ++ + L + G G+ S L
Sbjct: 264 GMGTRVGR--DGRRGGSRPHKRHRFTRTDDSDDSLLVDELDQGPAIPWARGGNRSGAPWL 321
Query: 153 FREMDEDAESEVGMEKGSEG 172
F +D S +G+ G+ G
Sbjct: 322 FGGLDTYGSSSLGLNVGASG 341
Score = 59 (25.8 bits), Expect = 1.6e-73, Sum P(4) = 1.6e-73
Identities = 24/94 (25%), Positives = 36/94 (38%)
Query: 408 DFLAMLEEKPVECENAPKVDAFNPGSDSTLGWPRIKQGRRCGLCGC----GNDGKPPKRL 463
+F K ++ E AP+ + P +T+ R+K G D
Sbjct: 124 NFSTSKSRKDMDAELAPRREGLRPRRSTTIANKRLKTESGADQDTSEEKDGQDETENGNE 183
Query: 464 IQDAGDSENEVYSGSSASEEPNYDIWDGFGDEPG 497
+ DA D ENEV + + E D D G+E G
Sbjct: 184 LDDADDGENEVEAEDEGNGEDEGDGEDE-GEEDG 216
Score = 50 (22.7 bits), Expect = 1.6e-73, Sum P(4) = 1.6e-73
Identities = 25/97 (25%), Positives = 41/97 (42%)
Query: 56 GSAARNLELRRSSRVRRAP------VLLDVSPSPV--KKRRKMDKTVNLYVSKSLNSSRR 107
G + +R S R+RR P L SP+ + +KR +T ++K L+ R
Sbjct: 9 GDGSVTKPVRTSDRLRRRPKLHGRSYLYYSSPNMLHNRKRNTKTRTAASQIAKMLHKGNR 68
Query: 108 SAKEKDNEKSVSPGVWGSRLRSRGRNVGFGAKSDESG 144
A+ N ++ + S R R +V +D SG
Sbjct: 69 PARAS-NAAPIASDLRRST-RKRRISVNLEDYTDSSG 103
Score = 49 (22.3 bits), Expect = 4.8e-72, Sum P(4) = 4.8e-72
Identities = 20/99 (20%), Positives = 41/99 (41%)
Query: 24 RKKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARNLELRRSSRVRRAPVLLDVSPSP 83
R KR ++ E+Y + G +ED A + R + S+ R + +++P
Sbjct: 84 RSTRKRRISVNLEDYTDSSGAEDEDMMSPAYR-TLRRRVHKNFSTSKSRKDMDAELAPRR 142
Query: 84 VKKRRKMDKTV-NLYVSKSLNSSRRSAKEKDNEKSVSPG 121
R + T+ N + + + +++EKD + G
Sbjct: 143 EGLRPRRSTTIANKRLKTESGADQDTSEEKDGQDETENG 181
Score = 46 (21.3 bits), Expect = 3.9e-74, Sum P(4) = 3.9e-74
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 1109 RVLISGSPGSGQRHLAACLLH 1129
R+L+ G G G HL +LH
Sbjct: 707 RLLLLGGEGVGLDHLGPAILH 727
Score = 46 (21.3 bits), Expect = 3.9e-74, Sum P(4) = 3.9e-74
Identities = 36/160 (22%), Positives = 56/160 (35%)
Query: 375 GEHN-EGEDHPDGGEHVRISTSEVKDGSSDHQKDDFLAMLEEKPVECENAPKVDAFNPGS 433
GE+ E ED +G + +DG D + D+ K + N +V G
Sbjct: 190 GENEVEAEDEGNGEDEGDGEDEGEEDGDDDEEGDE--EQEGRKRYDLRNRAEVRRMPTGE 247
Query: 434 DSTLGWPR-----IKQGR--RCGLCGCGNDGKPPKRLIQDAGDSENEVYSGSSASEEPNY 486
+ PR + QG R G G +P KR D ++ + P
Sbjct: 248 INKQQQPRSPRRVLHQGMGTRVGRDGRRGGSRPHKRHRFTRTDDSDDSLLVDELDQGPAI 307
Query: 487 DIWDGFGDEPG--WLGRLLGPINDRYGIAGTWVHQHCAVW 524
W G+ G WL G + D YG + ++ + W
Sbjct: 308 P-WARGGNRSGAPWL---FGGL-DTYGSSSLGLNVGASGW 342
Score = 42 (19.8 bits), Expect = 2.6e-71, Sum P(4) = 2.6e-71
Identities = 38/181 (20%), Positives = 75/181 (41%)
Query: 84 VKKRRKMDKTVNLYVSKS--LNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFGAKSD 141
+++R K+ LY S L++ +R+ K + ++ + +R N A SD
Sbjct: 23 LRRRPKLHGRSYLYYSSPNMLHNRKRNTKTRTAASQIAKMLHKGNRPARASNAAPIA-SD 81
Query: 142 ESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDLVVSKAEKLDR-----F---KELNDLG 193
+R+R++ +++ +S G+E D++ L R F K D+
Sbjct: 82 LR-RSTRKRRISVNLEDYTDSS-----GAEDEDMMSPAYRTLRRRVHKNFSTSKSRKDMD 135
Query: 194 DE--PEKSGQXXXXXXXXXXVGTRGMKEESGRGEELEVVRNEREDSKTIPESVVGNEGED 251
E P + G + + +K ESG ++ +E +D + E+ GNE +D
Sbjct: 136 AELAPRREG---LRPRRSTTIANKRLKTESGADQDT----SEEKDGQDETEN--GNELDD 186
Query: 252 S 252
+
Sbjct: 187 A 187
Score = 38 (18.4 bits), Expect = 2.6e-71, Sum P(4) = 2.6e-71
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 617 RKMKMEIRK-LSNDAWRKDMEAE 638
R ++ + K S RKDM+AE
Sbjct: 115 RTLRRRVHKNFSTSKSRKDMDAE 137
Score = 37 (18.1 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 14 RDGSVSGPRLRKKHK 28
RDG G R K+H+
Sbjct: 271 RDGRRGGSRPHKRHR 285
>ZFIN|ZDB-GENE-030131-5754 [details] [associations]
symbol:wu:fi16e04 "wu:fi16e04" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS00674
PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-030131-5754 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01038330
IPI:IPI00901018 Ensembl:ENSDART00000111963 Uniprot:E7EXJ5
Length = 1358
Score = 744 (267.0 bits), Expect = 6.8e-74, Sum P(5) = 6.8e-74
Identities = 156/322 (48%), Positives = 215/322 (66%)
Query: 659 LHRDLLRIAPVYIGGSDSDSGKLFEG--FESVAGLQDVIRCMKEVVILPLLYPEFFDNLG 716
+H+D ++I +D D ++ + F+S+ GL I +KE+V+ PLLYPE F+
Sbjct: 364 IHKDRIKIGASL---ADVDPMQIDQTVRFDSIGGLGKHISALKEMVVFPLLYPEVFEKFK 420
Query: 717 LTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLL 776
+ PPRG L +G PGTGKTLV RAL C++G++++A+F RKGADCL K+VG++ERQLRLL
Sbjct: 421 IQPPRGCLFYGPPGTGKTLVARALANECSQGERKVAFFMRKGADCLSKWVGESERQLRLL 480
Query: 777 FQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNR 836
F A + +PSIIFFDEIDG+AP R+ +QDQ HSS+VSTLLALMDGL SRG VVVIGATNR
Sbjct: 481 FDQAYQMRPSIIFFDEIDGIAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEVVVIGATNR 540
Query: 837 PEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAG 896
+++DPALRRPGRFDRE F LP E R IL +HT W ++ + L+ +A + G+ G
Sbjct: 541 LDSIDPALRRPGRFDREFLFNLPDREARKDILKIHTRHWDPQLSDAFLEELADKCVGYCG 600
Query: 897 ADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVEERDWLEALSCSPPP 956
D++A+C +AA+ AL+R +P + A+++K + + S V RD+L A+ P
Sbjct: 601 TDIKAVCAEAALCALRRRYPQ---IYASSQKLL----LDVESICVSGRDFLSAMR-KIVP 652
Query: 957 CSKREAGIAAHDL--VSSPLPS 976
S+R A L V PL S
Sbjct: 653 ASQRAVVSPAKALTPVIEPLLS 674
Score = 56 (24.8 bits), Expect = 6.8e-74, Sum P(5) = 6.8e-74
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 1109 RVLISGSPGSGQR-HLAACLLHSFIGNVEIQKVDLATI 1145
R+L+ G+ GS Q HLA +LH+ + + +D+A +
Sbjct: 754 RLLLCGTSGSAQTSHLAPAILHT-LEKFTVYTLDVAVL 790
Score = 53 (23.7 bits), Expect = 2.2e-73, Sum P(3) = 2.2e-73
Identities = 29/120 (24%), Positives = 43/120 (35%)
Query: 36 EEYAKNHGEPNEDDDEAAETGSAARNLELRRSSRVRRAPVLLDVSPSPVKKRRKMDKTVN 95
EE + G+ +ED+DE E R R R+A V KK+ K +
Sbjct: 229 EEEENDEGDADEDEDEDEEDNGK------RYDFRQRKAVVRYQAPLEEPKKQSIFFKRHS 282
Query: 96 LYVSKSLNSSRRSAKEKDNEKSVSPGVW----GSRLRSRGRNVGFGAKSDESGHLSRRRK 151
+ +S S S + N + + W G R + + SDE RR K
Sbjct: 283 TPLRRSYPFSSSSPRRPYNNRRSTSSRWSEGDGRRHAIHSSDSTSSSSSDEEKFERRRTK 342
Score = 45 (20.9 bits), Expect = 2.5e-73, Sum P(4) = 2.5e-73
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 307 EKSDKERMQFEDRDERENHQ 326
E SD + ++ D+DE E +
Sbjct: 204 ESSDNQENEYSDQDEEEEEE 223
Score = 44 (20.5 bits), Expect = 6.8e-74, Sum P(5) = 6.8e-74
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 458 KPPKRLIQDAGDSENEVYSGSSASEEPNYDIWDGFGDE 495
KP R +++ D++ YS EE D G G+E
Sbjct: 196 KPSVRGQEESSDNQENEYSDQDEEEEEEED---GEGEE 230
Score = 43 (20.2 bits), Expect = 6.8e-74, Sum P(5) = 6.8e-74
Identities = 10/47 (21%), Positives = 22/47 (46%)
Query: 629 DAWRKDMEAEEKWLENCGEDEEFLKREGKRLHRDLLRIAPVYIGGSD 675
D R + + + + ++E+F +R K +R + R P+ + D
Sbjct: 314 DGRRHAIHSSDSTSSSSSDEEKFERRRTKSRNRSINRCLPMNLRKDD 360
Score = 39 (18.8 bits), Expect = 6.8e-74, Sum P(5) = 6.8e-74
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 382 DHPDGGEHVRISTSEVKDGSSDHQKDDFLAMLEEKPVECENA 423
D E + ++ + K DD L E+ P EN+
Sbjct: 9 DMDSSSEFLSLNPPKRKSARLKKANDDSLTSAEDSPANEENS 50
Score = 38 (18.4 bits), Expect = 8.4e-73, Sum P(4) = 8.4e-73
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 385 DGGEHVRISTSEVKDGSSDHQK 406
DG H S+ SSD +K
Sbjct: 314 DGRRHAIHSSDSTSSSSSDEEK 335
Score = 37 (18.1 bits), Expect = 1.1e-73, Sum P(5) = 1.1e-73
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 297 DENVEVMDTTEKSDKERMQFEDRDEREN 324
DE+ + +D+T S R + + R E ++
Sbjct: 99 DEHTDEVDSTPTSRNLRARIQRRGEDDS 126
>POMBASE|SPBP22H7.05c [details] [associations]
symbol:abo2 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBP22H7.05c GO:GO:0005524 EMBL:CU329671
GO:GO:0045944 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 EMBL:AB004535 RefSeq:NP_595602.1
ProteinModelPortal:Q9C0W2 EnsemblFungi:SPBP22H7.05c.1
GeneID:2541287 KEGG:spo:SPBP22H7.05c OrthoDB:EOG4N07QZ
NextBio:20802398 Uniprot:Q9C0W2
Length = 1201
Score = 760 (272.6 bits), Expect = 7.1e-74, Sum P(2) = 7.1e-74
Identities = 154/295 (52%), Positives = 206/295 (69%)
Query: 622 EIRKLSNDAWRKDMEAEEKWLENCGEDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKL 681
E+ S++ D+E + N G + +LH I I +D + +
Sbjct: 312 ELSSTSSEQ-TSDVEGLNAY-NNLGASSDIENAPSSQLHFG--HIDEKTIRSTDPFANRE 367
Query: 682 FEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALI 741
F S+ GL+D+I +KE+V+LPLLYPE F +L +TPPRGVL HG PGTGKTL+ R L
Sbjct: 368 NLDFNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLA 427
Query: 742 GSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRT 801
+C+ +++I++F RKG+DCL K+VG+AERQLRLLF+ A + QPSIIFFDEIDGLAP R+
Sbjct: 428 ANCSTKNQKISFFLRKGSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRS 487
Query: 802 RQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+Q+QTHSS+VSTLLALMDGL +RG VVVIGATNRP +DPALRRPGRFDRE YFPLP+
Sbjct: 488 SKQEQTHSSIVSTLLALMDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNK 547
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFP 916
+ R IL +++ + + S L +A T+G+ GADL+ALCT+AA+ A++R FP
Sbjct: 548 QARMKILEINSLHFSPKIPESYLLHLAESTSGYGGADLKALCTEAALNAVRRTFP 602
Score = 49 (22.3 bits), Expect = 7.1e-74, Sum P(2) = 7.1e-74
Identities = 17/45 (37%), Positives = 20/45 (44%)
Query: 468 GDSENEVY-SGSSASEEPNYDIWDGFGDEPGWLGRLLGPINDRYG 511
GD +E Y G S E N D F D P L ++ PI R G
Sbjct: 171 GDYLDEDYVDGQSDPESSNASDSD-FADSPDDLTKVRSPIPSRRG 214
>DICTYBASE|DDB_G0281521 [details] [associations]
symbol:DDB_G0281521 "BRAT group protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 dictyBase:DDB_G0281521 GO:GO:0005524
EMBL:AAFI02000041 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 RefSeq:XP_640671.1 ProteinModelPortal:Q54TZ0
EnsemblProtists:DDB0220704 GeneID:8623056 KEGG:ddi:DDB_G0281521
InParanoid:Q54TZ0 OMA:FPEYYEL ProtClustDB:CLSZ2846786
Uniprot:Q54TZ0
Length = 1800
Score = 739 (265.2 bits), Expect = 1.4e-72, Sum P(4) = 1.4e-72
Identities = 148/273 (54%), Positives = 202/273 (73%)
Query: 648 DEEFLKREGKRLHRDLLRIAPVYIGGS-DSDSGKLFE--GFESVAGLQDVIRCMKEVVIL 704
D+EF GKR L P+ + G+ DS+ + GF S+ GL I+ +KE+++L
Sbjct: 703 DDEF--GVGKRGSSGPL---PINLSGNKDSEPLSIDNKIGFSSIGGLDKHIQLLKEMLML 757
Query: 705 PLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGK 764
PLLYPE F+ + PP+GVL +G PGTGKTL+ RAL+ C G +++++F RKGADCL K
Sbjct: 758 PLLYPEVFNKFKIQPPKGVLFYGPPGTGKTLLARALVNECNVGGQKVSFFMRKGADCLSK 817
Query: 765 YVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKS 824
+VG+AERQLRLLF+ A+ QPSIIFFDEIDGLAP R+ +QDQ H+S+VSTLLALMDGL +
Sbjct: 818 WVGEAERQLRLLFEQAKAMQPSIIFFDEIDGLAPVRSSRQDQIHNSIVSTLLALMDGLDN 877
Query: 825 RGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERW-PKPVTGSL 883
RG V+VIGATNR +++DPALRRPGRFDRE+ F LPS E R IL++HTE W PKP + L
Sbjct: 878 RGQVIVIGATNRIDSIDPALRRPGRFDRELLFTLPSKEARHRILTIHTENWLPKPSSQLL 937
Query: 884 LKWIAARTAGFAGADLQALCTQAAIIALKRNFP 916
L+ I+ + AG+ GAD+++LC+++ + +L+ +P
Sbjct: 938 LE-ISDQLAGYCGADIKSLCSESVLCSLRTTYP 969
Score = 62 (26.9 bits), Expect = 1.4e-72, Sum P(4) = 1.4e-72
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 35 EEEYAKNHGEPNEDDD-EAAETGSAARNLELR-RSSRVRRAPVLLDVSPSPVKKRRKMDK 92
EEE + GE E+++ E + + + LR RSS+ + P +D KK RK +K
Sbjct: 381 EEEEEQEEGEEEEEEEGEEEQQNNRKYTISLRPRSSKSPQFPNFIDNDLDYNKKSRKRNK 440
Score = 55 (24.4 bits), Expect = 1.4e-72, Sum P(4) = 1.4e-72
Identities = 19/84 (22%), Positives = 37/84 (44%)
Query: 1072 DSNDDCANSKPSIAHSYGINCSLLQNISCTASKGSGFRVLISGSPGSGQRHLAACLLHSF 1131
++N++ NS +I ++ + N+ R+LI G G GQ LA LL+
Sbjct: 1066 ENNNNNNNSNENINNNNNFKQLFINNLMIQNFSVYRPRLLIHGEQGMGQIQLANSLLYH- 1124
Query: 1132 IGNVEIQKVDLATISQEGRGDLVQ 1155
+ I +D++ + + V+
Sbjct: 1125 LEEFPIFSIDISALISDPTSKTVE 1148
Score = 46 (21.3 bits), Expect = 1.3e-71, Sum P(5) = 1.3e-71
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 296 GDENV--EVMDTTEKSDKERMQFEDRDERENHQ 326
G+E+V E+++ E+ ++E + E+ +E E Q
Sbjct: 369 GEEDVDEEMVEEEEEEEQEEGEEEEEEEGEEEQ 401
Score = 43 (20.2 bits), Expect = 1.3e-71, Sum P(5) = 1.3e-71
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 147 SRRRKLFREMDEDAESEVGMEKGSE 171
S+R+K +++ +++ E EV E+ +
Sbjct: 329 SQRQKQYQQQEDEEEEEVETEQDDD 353
Score = 40 (19.1 bits), Expect = 1.4e-72, Sum P(4) = 1.4e-72
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 919 EILSAAAEKAFCSKRVTLP 937
+I S +E CS R T P
Sbjct: 951 DIKSLCSESVLCSLRTTYP 969
Score = 39 (18.8 bits), Expect = 3.5e-70, Sum P(4) = 3.5e-70
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 297 DENVEVMDTTEKSDKERMQFEDRDEREN 324
DE E ++T + D E E++ E EN
Sbjct: 340 DEEEEEVETEQDDDDE----EEQQEEEN 363
>WB|WBGene00008682 [details] [associations]
symbol:lex-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0007126 "meiosis" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 728 (261.3 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 145/259 (55%), Positives = 183/259 (70%)
Query: 662 DLLRIAPVYIGGSDSDSGKLFE--GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTP 719
D +R G SD D + GF+ V GL I+ +KEVV+ P+LYPE F+ + P
Sbjct: 365 DRMRKTDAGQGASDIDPMSVDSSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINP 424
Query: 720 PRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQV 779
P+GV+ +G PGTGKTLV RAL C RG ++A+F RKGADCL K+VG++ERQLRLLF
Sbjct: 425 PKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQ 484
Query: 780 AEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEA 839
A +PSIIFFDEIDGLAP R+ +QDQ H+S+VSTLLALMDGL RG VVVIGATNR +
Sbjct: 485 AYAMRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDT 544
Query: 840 VDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWP--KPVTGSLLKWIAARTAGFAGA 897
+DPALRRPGRFDRE+ F LP + R IL +HT +W KP+ +L IA RT+G+ GA
Sbjct: 545 LDPALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETL-DAIAERTSGYCGA 603
Query: 898 DLQALCTQAAIIALKRNFP 916
DL+ LCT+A +I L+ +P
Sbjct: 604 DLKFLCTEAVLIGLRSRYP 622
Score = 71 (30.1 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 20/85 (23%), Positives = 43/85 (50%)
Query: 35 EEEYAKNHGEPNEDDDEAAETGSAARNLELRRSSRVRRAPVL-LDVSPSPVKKRRKMD-- 91
EE+ +P E++D+++ S+ + R+ S RR PV+ + S + +R +++
Sbjct: 233 EEDEQSGEKDPEEEEDDSSNAESSEESTAPRQYSLRRRQPVVQFNASEARENRRARLEHH 292
Query: 92 KTVNLYVS-KSLNSSRRSAKEKDNE 115
+ N ++ N SRR + D++
Sbjct: 293 RVANQNRHHRNRNGSRRRRSDSDSD 317
Score = 67 (28.6 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
Identities = 45/205 (21%), Positives = 75/205 (36%)
Query: 9 SSPKKRDGSVSGPRLRKKHKRLD--AICEEEYAKNHGEPNEDDDEAAETGSAARNLELRR 66
SS ++ G V G + ++++ EEEY H + ++DE R RR
Sbjct: 39 SSRRRSSGGVDGNGYTRSGRKINHNRYYEEEY---HEAISSEEDE--------RRYRTRR 87
Query: 67 SSR--VRRAPVLLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWG 124
SS R V+ + S ++ K +Y+S A +N
Sbjct: 88 SSNSMTYRQQVMQAIDESKRNQKVPPAKRKRIYLSDEEEEDFAEAAHVENTVPERATRRS 147
Query: 125 SRLRSRGRNVGFGAKSDESGHLSRRRKLFREM-DEDAESEVGMEKG--SEGGDLVVSKAE 181
+R RS + G E + R RK + + E E + + EGG +V
Sbjct: 148 TRRRS-SMHEELGVSEQEESPVRRTRKAAKRLGSEQPEENLAADDPLPMEGGGEIVLPIA 206
Query: 182 KLDRFKE------LNDLGDEPEKSG 200
++D E + +G E E+ G
Sbjct: 207 EIDGMAEQENEDLIEKIGREEEEEG 231
Score = 38 (18.4 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 157 DEDAESEVGMEKGSEGGDLVVSKAEKLDRFKELND 191
+ED ++G E+ EG + EK D +E +D
Sbjct: 216 NEDLIEKIGREEEEEGAEEDEQSGEK-DPEEEEDD 249
>UNIPROTKB|P54816 [details] [associations]
symbol:lex-1 "Tat-binding homolog 7" species:6239
"Caenorhabditis elegans" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0031445 "regulation of heterochromatin assembly" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 728 (261.3 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 145/259 (55%), Positives = 183/259 (70%)
Query: 662 DLLRIAPVYIGGSDSDSGKLFE--GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTP 719
D +R G SD D + GF+ V GL I+ +KEVV+ P+LYPE F+ + P
Sbjct: 365 DRMRKTDAGQGASDIDPMSVDSSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINP 424
Query: 720 PRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQV 779
P+GV+ +G PGTGKTLV RAL C RG ++A+F RKGADCL K+VG++ERQLRLLF
Sbjct: 425 PKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQ 484
Query: 780 AEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEA 839
A +PSIIFFDEIDGLAP R+ +QDQ H+S+VSTLLALMDGL RG VVVIGATNR +
Sbjct: 485 AYAMRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDT 544
Query: 840 VDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWP--KPVTGSLLKWIAARTAGFAGA 897
+DPALRRPGRFDRE+ F LP + R IL +HT +W KP+ +L IA RT+G+ GA
Sbjct: 545 LDPALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETL-DAIAERTSGYCGA 603
Query: 898 DLQALCTQAAIIALKRNFP 916
DL+ LCT+A +I L+ +P
Sbjct: 604 DLKFLCTEAVLIGLRSRYP 622
Score = 71 (30.1 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 20/85 (23%), Positives = 43/85 (50%)
Query: 35 EEEYAKNHGEPNEDDDEAAETGSAARNLELRRSSRVRRAPVL-LDVSPSPVKKRRKMD-- 91
EE+ +P E++D+++ S+ + R+ S RR PV+ + S + +R +++
Sbjct: 233 EEDEQSGEKDPEEEEDDSSNAESSEESTAPRQYSLRRRQPVVQFNASEARENRRARLEHH 292
Query: 92 KTVNLYVS-KSLNSSRRSAKEKDNE 115
+ N ++ N SRR + D++
Sbjct: 293 RVANQNRHHRNRNGSRRRRSDSDSD 317
Score = 67 (28.6 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
Identities = 45/205 (21%), Positives = 75/205 (36%)
Query: 9 SSPKKRDGSVSGPRLRKKHKRLD--AICEEEYAKNHGEPNEDDDEAAETGSAARNLELRR 66
SS ++ G V G + ++++ EEEY H + ++DE R RR
Sbjct: 39 SSRRRSSGGVDGNGYTRSGRKINHNRYYEEEY---HEAISSEEDE--------RRYRTRR 87
Query: 67 SSR--VRRAPVLLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWG 124
SS R V+ + S ++ K +Y+S A +N
Sbjct: 88 SSNSMTYRQQVMQAIDESKRNQKVPPAKRKRIYLSDEEEEDFAEAAHVENTVPERATRRS 147
Query: 125 SRLRSRGRNVGFGAKSDESGHLSRRRKLFREM-DEDAESEVGMEKG--SEGGDLVVSKAE 181
+R RS + G E + R RK + + E E + + EGG +V
Sbjct: 148 TRRRS-SMHEELGVSEQEESPVRRTRKAAKRLGSEQPEENLAADDPLPMEGGGEIVLPIA 206
Query: 182 KLDRFKE------LNDLGDEPEKSG 200
++D E + +G E E+ G
Sbjct: 207 EIDGMAEQENEDLIEKIGREEEEEG 231
Score = 38 (18.4 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 157 DEDAESEVGMEKGSEGGDLVVSKAEKLDRFKELND 191
+ED ++G E+ EG + EK D +E +D
Sbjct: 216 NEDLIEKIGREEEEEGAEEDEQSGEK-DPEEEEDD 249
>UNIPROTKB|F1NN52 [details] [associations]
symbol:F1NN52 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:AADN02022496 EMBL:AADN02022497
EMBL:AADN02022498 EMBL:AADN02022499 IPI:IPI00588479
Ensembl:ENSGALT00000026409 Uniprot:F1NN52
Length = 1337
Score = 742 (266.3 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 154/318 (48%), Positives = 214/318 (67%)
Query: 644 NCGEDE-EFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVV 702
N EDE + ++++ ++ + L + P+ I S F++V GL D I +KE+V
Sbjct: 329 NFQEDELKGVRKDRMKIGKSLADVDPMQIDSSVR--------FDAVGGLSDHISALKEMV 380
Query: 703 ILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCL 762
+ PLLYPE F+ + PPRG L +G PGTGKTLV RAL C++G++R+A+F RKGADCL
Sbjct: 381 VFPLLYPEVFERFKIQPPRGCLFYGPPGTGKTLVARALANECSQGNRRVAFFMRKGADCL 440
Query: 763 GKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGL 822
K+VG++ERQLRLLF A + +PSIIFFDEIDGLAP R+ +QDQ HSS+VSTLLALMDGL
Sbjct: 441 SKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSKQDQIHSSIVSTLLALMDGL 500
Query: 823 KSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGS 882
RG VVVIGATNR +++DPALRRPGRFDRE F LP+ E R I +HT W + +
Sbjct: 501 DGRGEVVVIGATNRLDSIDPALRRPGRFDREFLFGLPNKEARKEIFKIHTRDWTPKLLDT 560
Query: 883 LLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVE 942
+ +A G+ GAD+++LC +AA+ AL+R +P Q LS+ EK ++ + S ++
Sbjct: 561 FIDELATECVGYCGADIKSLCAEAALCALRRRYP-QIYLSS--EKL----QLDVNSIKIK 613
Query: 943 ERDWLEALSCSPPPCSKR 960
+D++ A+ P S+R
Sbjct: 614 AKDFVMAMQ-KTVPASQR 630
Score = 45 (20.9 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 28/102 (27%), Positives = 42/102 (41%)
Query: 33 ICEEEYAKNHGEPNEDDDEAAETGSAARNLELRRS--------SRVRRAPVLLDVSPSPV 84
+C+ + H E EDDD E +L R++ R RR +L PSP
Sbjct: 198 MCDGNTSSEHIEGKEDDD--VEDNQKRYDLRQRKTVVPYQAPLERPRRRKILF---PSPR 252
Query: 85 KK-RRKMDKTVNLYVSKSL---NSSR--RSAKEKDNEKSVSP 120
K+ R + ++ K L N R R+A ++ S SP
Sbjct: 253 KRPSRLVHDILHSQGEKKLFCLNVCRLRRAAHNANSTSSSSP 294
Score = 38 (18.4 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 942 EERDWLEAL----SCSPPPCSKREAGIAAHDLVSSPLP 975
E R + E L + PP K+ AG L +P P
Sbjct: 866 ERRSFFEDLILNQAAKPPTSKKKAAGQTLEALPVAPPP 903
>UNIPROTKB|D4A9R0 [details] [associations]
symbol:LOC500625 "Protein LOC500625" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00550000074694 IPI:IPI00471839
Ensembl:ENSRNOT00000052041 RGD:1566199 ArrayExpress:D4A9R0
Uniprot:D4A9R0
Length = 419
Score = 616 (221.9 bits), Expect = 3.1e-62, Sum P(2) = 3.1e-62
Identities = 115/175 (65%), Positives = 140/175 (80%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+S+ GL I +KE+V+ PLLYPE F+ + PPRG L +G PGTGKTLV RAL C
Sbjct: 238 FDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANEC 297
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++GDK++A+F RKGADCL K+VG++ERQLRLLF A +PSIIFFDEIDGLAP R+ +Q
Sbjct: 298 SQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQ 357
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
DQ HSS+VSTLLALMDGL +RG +VVIGATNR +++DPALRRPGRFDRE F LP
Sbjct: 358 DQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLP 412
Score = 54 (24.1 bits), Expect = 3.1e-62, Sum P(2) = 3.1e-62
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 647 EDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDV 694
++E F +R+ K + R R P+ D SG L E + A L DV
Sbjct: 180 DEERFERRKSKSMARARNRCLPMNFRAEDLASGILRERVKVGASLADV 227
Score = 51 (23.0 bits), Expect = 6.4e-62, Sum P(2) = 6.4e-62
Identities = 32/140 (22%), Positives = 54/140 (38%)
Query: 25 KKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARNLELRRS-SRVRRAPV-------- 75
+ H + EEE ++ E ++ E NL R++ R + P+
Sbjct: 88 QNHHEVSTEGEEEESQEEDGDIEVEEAEGEENDRPYNLRQRKTVDRYQAPPIVPAHQKKR 147
Query: 76 ---LLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGR 132
L D+ SP ++ K ++ S SS E+ KS++ R R+R
Sbjct: 148 ENTLFDIHRSPARRSHIRRKKHAIH-SSDTTSSDEERFERRKSKSMA------RARNRCL 200
Query: 133 NVGFGAKSDESGHLSRRRKL 152
+ F A+ SG L R K+
Sbjct: 201 PMNFRAEDLASGILRERVKV 220
>UNIPROTKB|F1NUE7 [details] [associations]
symbol:F1NUE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00550000074694 OMA:WNISAGQ
EMBL:AADN02018482 IPI:IPI00579829 Ensembl:ENSGALT00000026612
Uniprot:F1NUE7
Length = 487
Score = 614 (221.2 bits), Expect = 5.2e-62, Sum P(2) = 5.2e-62
Identities = 115/175 (65%), Positives = 140/175 (80%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+S+ GL I +KE+V+ PLLYPE F+ + PPRG L +G PGTGKTLV RAL C
Sbjct: 312 FDSIGGLSHHILALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANEC 371
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++GDK++A+F RKGADCL K+VG++ERQLRLLF A +PSIIFFDEIDGLAP R+ +Q
Sbjct: 372 SQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQ 431
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
DQ HSS+VSTLLALMDGL +RG +VVIGATNR +++DPALRRPGRFDRE F LP
Sbjct: 432 DQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLP 486
Score = 54 (24.1 bits), Expect = 5.2e-62, Sum P(2) = 5.2e-62
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 647 EDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDV 694
++E F +R+ K + R R P+ D SG L E + A L DV
Sbjct: 254 DEERFERRKSKSMARARNRCLPLNFRAEDLASGILRERVKVGASLADV 301
Score = 52 (23.4 bits), Expect = 8.4e-62, Sum P(2) = 8.4e-62
Identities = 32/140 (22%), Positives = 54/140 (38%)
Query: 25 KKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARNLELRRS-SRVRRAPV-------- 75
+ H + EEE ++ E ++ E NL R++ R + P+
Sbjct: 162 QNHHEVSTEGEEEESQEEDGDIEAEEAEGEENDRPYNLRQRKTVERYQAPPIVPAHQKKR 221
Query: 76 ---LLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGR 132
L D+ SP ++ K ++ S SS E+ KS++ R R+R
Sbjct: 222 ENTLFDIHRSPARRSHIRRKKHAIH-SSDTTSSDEERFERRKSKSMA------RARNRCL 274
Query: 133 NVGFGAKSDESGHLSRRRKL 152
+ F A+ SG L R K+
Sbjct: 275 PLNFRAEDLASGILRERVKV 294
>RGD|1304849 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 RGD:1304849 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OrthoDB:EOG441Q9S
GeneTree:ENSGT00550000074694 IPI:IPI00557599
Ensembl:ENSRNOT00000008508 UCSC:RGD:1304849 ArrayExpress:D3ZJD2
Uniprot:D3ZJD2
Length = 1373
Score = 576 (207.8 bits), Expect = 6.4e-55, Sum P(4) = 6.4e-55
Identities = 132/314 (42%), Positives = 194/314 (61%)
Query: 651 FLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFE--SVAGLQDVIRCMKEVVILPLLY 708
F K E + +++D ++I +D D +L SV + +++ ++P+++
Sbjct: 377 FRKDEIRGIYKDRMKIGANL---ADVDPMQLDSSVSVFSVTLSYSICALREDLSLIPIIH 433
Query: 709 PEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGD 768
+ + PPRG L +G PGTGKTLV RAL C+RGDKR+A+F RKGADCL K+VG+
Sbjct: 434 MMTYIKFKIQPPRGCLFYGPPGTGKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGE 493
Query: 769 AERQLRLLF-QVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGS 827
+E QLRLLF Q+ +K + S +F D L + ++ + SS+VSTLLALMDGL SRG
Sbjct: 494 SESQLRLLFDQIYQK-RASDLFTDGRKALGSVPSSRKKKKFSSIVSTLLALMDGLDSRGE 552
Query: 828 VVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERW-PKPVTGSLLKW 886
+VVIGATNR +++DPALRRPGRFDRE F LP + R IL +HT W PKPV L+
Sbjct: 553 IVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEILKIHTRDWNPKPVD-MFLEE 611
Query: 887 IAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVEERDW 946
+A G+ GAD++++C +AA+ AL+R +P +I + + EK ++ L S + +D+
Sbjct: 612 LAENCVGYCGADIKSICAEAALCALRRRYP--QIYTTS-EKL----QLDLSSINISAKDF 664
Query: 947 LEALSCSPPPCSKR 960
A+ P S+R
Sbjct: 665 ETAMQ-KIIPASQR 677
Score = 60 (26.2 bits), Expect = 4.6e-54, Sum P(3) = 4.6e-54
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 36 EEYAKNHGEPNEDDDEAAETGSAARNLELRRSSRVRRAPVLLDVSPSPVKKRRKMDKTVN 95
EE + GE EDD++ E G + + R R R+A V +P++K R K N
Sbjct: 251 EEQEDDDGEDEEDDEDEEEDGE--EDNQKRYYLRQRKATVYYQ---APLEKPRHQRKP-N 304
Query: 96 LYVSKSLNSSR 106
++ S + +R
Sbjct: 305 MFYSGPASPAR 315
Score = 59 (25.8 bits), Expect = 6.4e-55, Sum P(4) = 6.4e-55
Identities = 54/230 (23%), Positives = 97/230 (42%)
Query: 39 AKNHGEPNEDDDEAAETGSAARNLEL---RRSSRVRRAPVLLDVSPSPVKKRRKMDKTVN 95
A+ G+ EAA GS+ + +E+ RS R R S K + +K N
Sbjct: 43 ARAAGKSTVPKAEAAGDGSSVKGVEICHNTRSLRSLRKQAQTSSDSSSDKNVERTEKYCN 102
Query: 96 -LYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRS-RGRNVGFGAKS--DESGHLSRRRK 151
+ ++ L + K+++ ++ + V +RS R RN+ + ++SG + RR
Sbjct: 103 GRHFTRQLAQQQADKKKEECQEDKAIPV----IRSLRNRNIAPSTEHLHEQSGDVEVRRS 158
Query: 152 L-FREMDEDAESE-VGMEKG-SEGGDLVVSKAEKL-----DRFKELNDLG--DEPEKSGQ 201
R ++ V +K + + V+ K + + R K+L DLG +E E+S
Sbjct: 159 CRIRTCRYSTMNQSVLFDKLITNTAEAVLQKMDDMKKMRRQRMKKLEDLGVFNETEESN- 217
Query: 202 XXXXXXXXXXVGTRGMKEESGRGEELEVVRNEREDSKTIPESVVGNEGED 251
+ TRG ++ + +E E N+ D ++ S G E ED
Sbjct: 218 --------LTMYTRGKRKAIQQADE-ETTDNQ--DG-SVESSEEGEEQED 255
Score = 57 (25.1 bits), Expect = 6.4e-55, Sum P(4) = 6.4e-55
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 1109 RVLISGSPGSGQR-HLAACLLHS 1130
R+LI G PG GQ HLA ++H+
Sbjct: 779 RLLIVGEPGFGQSSHLAPAVIHA 801
Score = 52 (23.4 bits), Expect = 6.4e-55, Sum P(4) = 6.4e-55
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 379 EGEDHPDG-GEHVRISTSEVKDGSSDHQKDDFL 410
EGE+ D GE E +DG D+QK +L
Sbjct: 249 EGEEQEDDDGEDEEDDEDEEEDGEEDNQKRYYL 281
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 507 (183.5 bits), Expect = 4.4e-45, Sum P(2) = 4.4e-45
Identities = 112/280 (40%), Positives = 166/280 (59%)
Query: 677 DSGKLFE-GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTL 735
D +L E G++ + G++ + ++E+V LPL +P+ F N+G+ PP+G+LL+G PG GKT+
Sbjct: 192 DEDRLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTM 251
Query: 736 VVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDG 795
+ RA+ +F G + + K G++E LR F+ AEK PSIIF DEID
Sbjct: 252 IARAVANETGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDS 306
Query: 796 LAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIY 855
+AP R + Q + +VS LL LMDGLKSR V+V+GATNRP ++DPALRR GRFDREI
Sbjct: 307 IAPKREKTQGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREID 366
Query: 856 FPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNF 915
+P R I+ +HT+ T L + +A T G+ GADL ALCT++A+ ++
Sbjct: 367 ITIPDATGRLEIMRIHTKNMKLDETVDL-EAVANETHGYVGADLAALCTESALQCIREKM 425
Query: 916 PLQEILSAAAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
+ ++ E S + L S +V + + AL+ S P
Sbjct: 426 DVIDL-----EDETISAEI-LESMSVTQDHFRTALTLSNP 459
Score = 420 (152.9 bits), Expect = 9.4e-35, Sum P(2) = 9.4e-35
Identities = 89/247 (36%), Positives = 144/247 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+ V R ++E V P+ +PE F G+ P +GVL +G PG GKTL+ +A+ C
Sbjct: 474 WEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANEC 533
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R LF A + P ++FFDE+D +A R Q
Sbjct: 534 QAN-----FISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQ 588
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP +
Sbjct: 589 GDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDL 648
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
R AIL + PV + L+++ +T GF+GADL +C +A +A++ + ++I
Sbjct: 649 PSRVAILKACLNK--SPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRESIE-KDI 705
Query: 921 LSAAAEK 927
S A +
Sbjct: 706 ESTKARQ 712
Score = 42 (19.8 bits), Expect = 4.4e-45, Sum P(2) = 4.4e-45
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
VL G PG G+ LA + + N + I+ +L T+
Sbjct: 512 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 548
Score = 39 (18.8 bits), Expect = 9.4e-35, Sum P(2) = 9.4e-35
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 541 AALCRGRALKCTR 553
AALC AL+C R
Sbjct: 410 AALCTESALQCIR 422
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 463 (168.0 bits), Expect = 7.3e-45, Sum P(2) = 7.3e-45
Identities = 100/260 (38%), Positives = 156/260 (60%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL+ I+ +KE V LPL +PE ++++G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 185 ESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVAN 244
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
S + R+ G++ + KY+GD + +R LF+VA+ PSI+F DEID + R
Sbjct: 245 STSATFLRVV-----GSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYD 299
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E++DPAL RPGR DR+I FPLP
Sbjct: 300 ANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLP 359
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK-RNFPLQ 918
++ R I +HT + +L +++ + F+GAD++A+CT+A ++AL+ R +
Sbjct: 360 DIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDE-FSGADIKAICTEAGLLALRERRMKVT 418
Query: 919 EI-LSAAAEKAFCSKRVTLP 937
+ A EK K+ +P
Sbjct: 419 HVDFKKAKEKVMFKKKEGVP 438
Score = 47 (21.6 bits), Expect = 7.3e-45, Sum P(2) = 7.3e-45
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 374 GGEHNEGEDHPDGGE 388
GG + +G+ PDGGE
Sbjct: 7 GGLNRQGDRKPDGGE 21
Score = 37 (18.1 bits), Expect = 8.2e-44, Sum P(2) = 8.2e-44
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 22 RLRKKHKRLD-AICEEEYAKNHGEPNEDDDEAAETGSAARNL 62
RL K + D + EEE+ N +++A E S +L
Sbjct: 64 RLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDL 105
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 443 (161.0 bits), Expect = 5.6e-44, Sum P(2) = 5.6e-44
Identities = 101/256 (39%), Positives = 156/256 (60%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+ ++ ++EVV LPL +PE F+ +G+ PP+G+LL+G PGTGKTL+ +A+
Sbjct: 169 YEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAV---- 224
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+ A F R G++ + K++G+ ++ +F++A++ PSIIF DEID +A RT
Sbjct: 225 --ATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDA 282
Query: 804 Q---DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
D+ + LLA MDG +RG V +IGATNRP+ +DPA+ RPGRFDR I P P
Sbjct: 283 LTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPD 342
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQ 918
+ R IL +HT + +L + IA T G GA+L+A+CT+A + A++ R++
Sbjct: 343 EKGRLEILKIHTRKMNLAEDVNLEE-IAKMTEGCVGAELKAICTEAGMNAIRELRDYVTM 401
Query: 919 EILSAAAEKAFCSKRV 934
+ A EK K+V
Sbjct: 402 DDFRKAVEKIMEKKKV 417
Score = 59 (25.8 bits), Expect = 5.6e-44, Sum P(2) = 5.6e-44
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 606 QYLARIKKLKARKMKMEIRKLSNDAWRKDMEAEEKWLENCGEDEEFLKREGKRLHRDLLR 665
Q ARI +L++R +K+E+ K K++E E L ++ E L+RE D +R
Sbjct: 44 QEKARIAELESRILKLELEK-------KELERENLQLM---KENEILRRE-----LDRMR 88
Query: 666 IAPVYIG 672
+ P+ +G
Sbjct: 89 VPPLIVG 95
Score = 45 (20.9 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 23/107 (21%), Positives = 42/107 (39%)
Query: 226 ELEVVRNEREDSKTIPESVVGNEGEDSKMIPESVLG--VENVTE---VVEADARVXXXXX 280
ELE ERE+ + + E+ + D +P ++G V+ V E VV++
Sbjct: 60 ELEKKELERENLQLMKENEILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVN 119
Query: 281 XXXXXXXXXXXXD---CIGDENVEVMDTTEKSDKERMQFEDRDEREN 324
C+ + + V+D ++ R + + DER N
Sbjct: 120 VSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPN 166
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 457 (165.9 bits), Expect = 6.6e-44, Sum P(2) = 6.6e-44
Identities = 100/260 (38%), Positives = 155/260 (59%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL+ I+ +KE V LPL +PE ++++G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 185 ESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVAN 244
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
S + R+ G++ + KY+GD + +R LF+VA+ PSI+F DEID + R
Sbjct: 245 STSATFLRVV-----GSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYD 299
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E++DPAL RPGR DR+I FPLP
Sbjct: 300 AHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLP 359
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK-RNFPLQ 918
++ R I +HT + +L +++ + F+GAD++A+CT+A ++AL+ R +
Sbjct: 360 DIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDE-FSGADIKAICTEAGLLALRERRMKVT 418
Query: 919 EI-LSAAAEKAFCSKRVTLP 937
A EK K+ +P
Sbjct: 419 HPDFKKAKEKVMFKKKEGVP 438
Score = 44 (20.5 bits), Expect = 6.6e-44, Sum P(2) = 6.6e-44
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 374 GGEHNEGEDHPDGGE 388
GG + +G+ PDGG+
Sbjct: 7 GGLNRQGDRKPDGGD 21
Score = 37 (18.1 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 22 RLRKKHKRLD-AICEEEYAKNHGEPNEDDDEAAETGSAARNL 62
RL K + D + EEE+ N +++A E S +L
Sbjct: 64 RLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDL 105
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 447 (162.4 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 96/233 (41%), Positives = 144/233 (61%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + V GL I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 185 ETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVAN 244
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ RI G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 245 QTSATFLRIV-----GSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYD 299
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V V+ ATNR E++DPAL RPGR DR+I FPLP
Sbjct: 300 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLP 359
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I +HT R +L ++I A+ +GAD++A+CT+A ++AL+
Sbjct: 360 DEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDE-LSGADIKAMCTEAGLLALR 411
Score = 51 (23.0 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 135 GFGAKSDESGHLSRRRKLFREMDEDAESEVGMEK-GSEGGD 174
GFG + ++ G +K ++ + S +G +K GS+G D
Sbjct: 7 GFGGRGNDRGAGDGEKKEKKKYEAPIPSRIGKKKKGSKGPD 47
Score = 43 (20.2 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 213 GTRGMKEESGRGEELEVVRNEREDSKTIPESVVGNEGEDS 252
G RG +G GE+ E + E I + G++G D+
Sbjct: 9 GGRGNDRGAGDGEKKEKKKYEAPIPSRIGKKKKGSKGPDA 48
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 497 (180.0 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 117/280 (41%), Positives = 161/280 (57%)
Query: 677 DSGKLFE-GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTL 735
D KL E G++ + G + + ++E++ LPL +P F LG+ PPRGVLL+G PG+GKT
Sbjct: 197 DEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTC 256
Query: 736 VVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDG 795
+ RA+ +F G + + K G+AE LR F+ AEK P+IIF DEID
Sbjct: 257 IARAVANETGA-----FFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDS 311
Query: 796 LAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIY 855
+AP R + + VVS LL LMDG+KSRG VVVI ATNR ++DPALRR GRFDREI
Sbjct: 312 IAPKREKTNGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREID 371
Query: 856 FPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNF 915
+P R IL +HT+ K L+ +A+ T GF GADL LCT+AA+ ++
Sbjct: 372 IGVPDDNGRFEILRIHTKNM-KLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKM 430
Query: 916 PLQEILSAAAEKAFCSKRVTLPSFAVEERDWLEAL-SCSP 954
+ ++ E K V L S V + + AL +C+P
Sbjct: 431 DVIDL-----EDEIIDKEV-LESMCVTQDHFNMALGTCNP 464
Score = 388 (141.6 bits), Expect = 2.8e-32, P = 2.8e-32
Identities = 84/240 (35%), Positives = 144/240 (60%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ + GL +V ++E+++ P+ +P+ F+ G++P RGVL +G PG GKTL+ +A+ C
Sbjct: 479 WDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASEC 538
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCR-TRQ 803
+ + + KG + L + G++E +R +F A P ++FFDE+D + R +
Sbjct: 539 SAN-----FVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSL 593
Query: 804 QDQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D + + V++ LL +DG+ + ++ IGATNRPE +D AL RPGR D+ IY PLP +
Sbjct: 594 GDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDL 653
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
R +IL+ + P V ++ + ++A +TAGF+GADL LC +AA A++ +E+
Sbjct: 654 GARISILTAILRKCP--VAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDAIDAEEM 711
Score = 41 (19.5 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
VL G PG G+ LA + N V I+ +L T+
Sbjct: 517 VLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTM 553
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 497 (180.0 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 117/280 (41%), Positives = 161/280 (57%)
Query: 677 DSGKLFE-GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTL 735
D KL E G++ + G + + ++E++ LPL +P F LG+ PPRGVLL+G PG+GKT
Sbjct: 197 DEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTC 256
Query: 736 VVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDG 795
+ RA+ +F G + + K G+AE LR F+ AEK P+IIF DEID
Sbjct: 257 IARAVANETGA-----FFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDS 311
Query: 796 LAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIY 855
+AP R + + VVS LL LMDG+KSRG VVVI ATNR ++DPALRR GRFDREI
Sbjct: 312 IAPKREKTNGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREID 371
Query: 856 FPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNF 915
+P R IL +HT+ K L+ +A+ T GF GADL LCT+AA+ ++
Sbjct: 372 IGVPDDNGRFEILRIHTKNM-KLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKM 430
Query: 916 PLQEILSAAAEKAFCSKRVTLPSFAVEERDWLEAL-SCSP 954
+ ++ E K V L S V + + AL +C+P
Sbjct: 431 DVIDL-----EDEIIDKEV-LESMCVTQDHFNMALGTCNP 464
Score = 388 (141.6 bits), Expect = 2.8e-32, P = 2.8e-32
Identities = 84/240 (35%), Positives = 144/240 (60%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ + GL +V ++E+++ P+ +P+ F+ G++P RGVL +G PG GKTL+ +A+ C
Sbjct: 479 WDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASEC 538
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCR-TRQ 803
+ + + KG + L + G++E +R +F A P ++FFDE+D + R +
Sbjct: 539 SAN-----FVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSL 593
Query: 804 QDQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D + + V++ LL +DG+ + ++ IGATNRPE +D AL RPGR D+ IY PLP +
Sbjct: 594 GDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDL 653
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
R +IL+ + P V ++ + ++A +TAGF+GADL LC +AA A++ +E+
Sbjct: 654 GARISILTAILRKCP--VAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDAIDAEEM 711
Score = 41 (19.5 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
VL G PG G+ LA + N V I+ +L T+
Sbjct: 517 VLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTM 553
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 491 (177.9 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 108/267 (40%), Positives = 160/267 (59%)
Query: 675 DSDSGKLFE-GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGK 733
D + L E G++ + G + + ++E+V LPL +P+ F ++G+ PPRGVLL+G PGTGK
Sbjct: 210 DEEENNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGK 269
Query: 734 TLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEI 793
TL+ RA+ +F G + + K G++E LR F+ AEK P+IIF DEI
Sbjct: 270 TLMARAVANETGA-----FFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEI 324
Query: 794 DGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDRE 853
D +AP R + + VVS LL LMDG+K+R +VVV+ ATNRP ++DPALRR GRFDRE
Sbjct: 325 DSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDRE 384
Query: 854 IYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ +P R IL +HT+ K L+ IAA T G+ G+D+ ALC++AA+ ++
Sbjct: 385 VDIGIPDPTGRLEILQIHTKNM-KLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIRE 443
Query: 914 NFPLQEILSAAAE-KAFCSKRVTLPSF 939
L ++ + + S VT+ +F
Sbjct: 444 KMDLIDLDEDTIDAEVLDSLGVTMENF 470
Score = 413 (150.4 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 104/274 (37%), Positives = 153/274 (55%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL +V + ++E V P+ +PE F GL+P RGVL +G PGTGKT++ +A+ C
Sbjct: 495 WEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANEC 554
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
A + + KG + L + G++E +R +F A P I+F DE+D +A R
Sbjct: 555 AAN-----FISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSV 609
Query: 805 -DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D +S VV+ LL MDG+ S+ +V VIGATNRPE +DPAL RPGR D IY PLP
Sbjct: 610 GDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDE 669
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQ-- 918
R +IL + PV+ + L++IA +T GF+GADL + +A IA+K +
Sbjct: 670 LGRLSILKAQLRK--TPVSDDVDLQYIANKTHGFSGADLGFITQRAVKIAIKESITADIN 727
Query: 919 --EILSAAAEKAFCSKRVTLPSFAVEERDWLEAL 950
+ L AA E + P + +R + EA+
Sbjct: 728 RTKALEAAGEDVPMDEDAEDPVPELTKRHFEEAM 761
Score = 47 (21.6 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 49 DDEAAETGSAARNLELRRSSRVRRAPVLLDVSPSPVKKRRK 89
DDE + GSA N +R + RV+ V+ + P P K K
Sbjct: 92 DDEL-DDGSARLNRVVRHNLRVKHGDVVT-IHPCPDIKYAK 130
Score = 41 (19.5 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
VL G PG+G+ LA + + N + ++ +L ++
Sbjct: 533 VLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSM 569
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 490 (177.5 bits), Expect = 2.1e-43, Sum P(2) = 2.1e-43
Identities = 111/272 (40%), Positives = 158/272 (58%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G++ + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTL+ RA+
Sbjct: 202 GYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK P+IIF DE+D +AP R +
Sbjct: 262 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A T G GADL ALC++AA+ A+++ L ++
Sbjct: 377 RLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL--- 432
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
E V + S AV D+ ALS S P
Sbjct: 433 --EDETIDAEV-MNSLAVTMDDFRWALSQSNP 461
Score = 417 (151.9 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 97/266 (36%), Positives = 153/266 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL DV R ++E+V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 476 WEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 536 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNV 590
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ S+ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 591 GDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+ R AIL + + P++ + L ++A T GF+GADL +C +A +A++ + EI
Sbjct: 651 KSRIAILKANLRK--SPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE-NEI 707
Query: 921 LSAAAEKAFCSKRVTLPS-FAVEERD 945
E+ +R T PS VEE D
Sbjct: 708 ---RRER----ERQTNPSAMEVEEDD 726
Score = 46 (21.3 bits), Expect = 2.1e-43, Sum P(2) = 2.1e-43
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 509 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 550
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 488 (176.8 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 111/272 (40%), Positives = 157/272 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTL+ RA+
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK P+IIF DE+D +AP R +
Sbjct: 262 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A T G GADL ALC++AA+ A+++ L ++
Sbjct: 377 RLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL--- 432
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
E V + S AV D+ ALS S P
Sbjct: 433 --EDETIDAEV-MNSLAVTMDDFRWALSQSNP 461
Score = 418 (152.2 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 97/266 (36%), Positives = 154/266 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV R ++E+V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 536 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+ R AIL + + PV + L+++A T GF+GADL +C +A +A++ + EI
Sbjct: 651 KSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE-SEI 707
Query: 921 LSAAAEKAFCSKRVTLPS-FAVEERD 945
E+ +R T PS VEE D
Sbjct: 708 ---RRER----ERQTNPSAMEVEEDD 726
Score = 46 (21.3 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 509 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 550
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 488 (176.8 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 111/272 (40%), Positives = 157/272 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTL+ RA+
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK P+IIF DE+D +AP R +
Sbjct: 262 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A T G GADL ALC++AA+ A+++ L ++
Sbjct: 377 RLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL--- 432
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
E V + S AV D+ ALS S P
Sbjct: 433 --EDETIDAEV-MNSLAVTMDDFRWALSQSNP 461
Score = 418 (152.2 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 97/266 (36%), Positives = 154/266 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV R ++E+V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 536 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+ R AIL + + PV + L+++A T GF+GADL +C +A +A++ + EI
Sbjct: 651 KSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE-SEI 707
Query: 921 LSAAAEKAFCSKRVTLPS-FAVEERD 945
E+ +R T PS VEE D
Sbjct: 708 ---RRER----ERQTNPSAMEVEEDD 726
Score = 46 (21.3 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 509 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 550
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 488 (176.8 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 111/272 (40%), Positives = 157/272 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTL+ RA+
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK P+IIF DE+D +AP R +
Sbjct: 262 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A T G GADL ALC++AA+ A+++ L ++
Sbjct: 377 RLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL--- 432
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
E V + S AV D+ ALS S P
Sbjct: 433 --EDETIDAEV-MNSLAVTMDDFRWALSQSNP 461
Score = 418 (152.2 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 97/266 (36%), Positives = 154/266 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV R ++E+V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 536 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+ R AIL + + PV + L+++A T GF+GADL +C +A +A++ + EI
Sbjct: 651 KSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE-SEI 707
Query: 921 LSAAAEKAFCSKRVTLPS-FAVEERD 945
E+ +R T PS VEE D
Sbjct: 708 ---RRER----ERQTNPSAMEVEEDD 726
Score = 46 (21.3 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 509 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 550
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 488 (176.8 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 111/272 (40%), Positives = 157/272 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTL+ RA+
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK P+IIF DE+D +AP R +
Sbjct: 262 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A T G GADL ALC++AA+ A+++ L ++
Sbjct: 377 RLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL--- 432
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
E V + S AV D+ ALS S P
Sbjct: 433 --EDETIDAEV-MNSLAVTMDDFRWALSQSNP 461
Score = 418 (152.2 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 97/266 (36%), Positives = 154/266 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV R ++E+V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 536 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+ R AIL + + PV + L+++A T GF+GADL +C +A +A++ + EI
Sbjct: 651 KSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE-SEI 707
Query: 921 LSAAAEKAFCSKRVTLPS-FAVEERD 945
E+ +R T PS VEE D
Sbjct: 708 ---RRER----ERQTNPSAMEVEEDD 726
Score = 46 (21.3 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 509 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 550
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 488 (176.8 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 111/272 (40%), Positives = 157/272 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTL+ RA+
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK P+IIF DE+D +AP R +
Sbjct: 262 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A T G GADL ALC++AA+ A+++ L ++
Sbjct: 377 RLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL--- 432
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
E V + S AV D+ ALS S P
Sbjct: 433 --EDETIDAEV-MNSLAVTMDDFRWALSQSNP 461
Score = 418 (152.2 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 97/266 (36%), Positives = 154/266 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV R ++E+V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 536 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+ R AIL + + PV + L+++A T GF+GADL +C +A +A++ + EI
Sbjct: 651 KSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE-SEI 707
Query: 921 LSAAAEKAFCSKRVTLPS-FAVEERD 945
E+ +R T PS VEE D
Sbjct: 708 ---RRER----ERQTNPSAMEVEEDD 726
Score = 46 (21.3 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 509 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 550
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 488 (176.8 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 111/272 (40%), Positives = 157/272 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTL+ RA+
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK P+IIF DE+D +AP R +
Sbjct: 262 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A T G GADL ALC++AA+ A+++ L ++
Sbjct: 377 RLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL--- 432
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
E V + S AV D+ ALS S P
Sbjct: 433 --EDETIDAEV-MNSLAVTMDDFRWALSQSNP 461
Score = 415 (151.1 bits), Expect = 2.9e-35, P = 2.9e-35
Identities = 96/266 (36%), Positives = 154/266 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV R ++++V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 476 WEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 536 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+ R AIL + + PV + L+++A T GF+GADL +C +A +A++ + EI
Sbjct: 651 KSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE-SEI 707
Query: 921 LSAAAEKAFCSKRVTLPS-FAVEERD 945
E+ +R T PS VEE D
Sbjct: 708 ---RRER----ERQTNPSAMEVEEDD 726
Score = 46 (21.3 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 509 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 550
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 488 (176.8 bits), Expect = 3.7e-43, Sum P(2) = 3.7e-43
Identities = 111/272 (40%), Positives = 157/272 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTL+ RA+
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK P+IIF DE+D +AP R +
Sbjct: 262 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A T G GADL ALC++AA+ A+++ L ++
Sbjct: 377 RLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL--- 432
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
E V + S AV D+ ALS S P
Sbjct: 433 --EDETIDAEV-MNSLAVTMDDFRWALSQSNP 461
Score = 425 (154.7 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 97/266 (36%), Positives = 154/266 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV R ++E+V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 536 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+ R AIL + + P G + L+++A T GF+GADL +C +A +A++ + EI
Sbjct: 651 KSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE-SEI 709
Query: 921 LSAAAEKAFCSKRVTLPS-FAVEERD 945
E+ +R T PS VEE D
Sbjct: 710 ---RRER----ERQTNPSAMEVEEDD 728
Score = 46 (21.3 bits), Expect = 3.7e-43, Sum P(2) = 3.7e-43
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 509 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 550
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 495 (179.3 bits), Expect = 4.0e-43, Sum P(2) = 4.0e-43
Identities = 113/266 (42%), Positives = 156/266 (58%)
Query: 660 HRDLLRIAPVYIGGSDSDSGKLFEG------FESVAGLQDVIRCMKEVVILPLLYPEFFD 713
H D R Y GS+ F+G F S+ GLQ I ++++V LP PE F
Sbjct: 251 HED--RTQSAYNQGSEETQN--FDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFK 306
Query: 714 NLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQL 773
+ PPRGVLL+G PGTGKT+V+RA+ A + ++ F G +GKY+G+ E +L
Sbjct: 307 FFNIMPPRGVLLYGPPGTGKTMVMRAV---AAEANAQV--FTIDGPSVVGKYLGETESRL 361
Query: 774 RLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGA 833
R +F+ A QPSIIF DEID LAP RT + S V+TLL L+DG+ + G VVVI A
Sbjct: 362 RKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAESRAVATLLTLLDGMANAGKVVVIAA 421
Query: 834 TNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAG 893
TNRP ++D ALRRPGR ++EI +P R I+ L P + + L+ +A+RT
Sbjct: 422 TNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHA 481
Query: 894 FAGADLQALCTQAAIIALKRNFPLQE 919
+ GADL A+ +AA+ A+KR LQ+
Sbjct: 482 YVGADLAAVVREAALRAIKRTISLQK 507
Score = 429 (156.1 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 96/249 (38%), Positives = 148/249 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G ++V + +KE V PL + E F LG+ PP+GVLL+G PG KT+ +A+ +
Sbjct: 547 WSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAI--AT 604
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
G + + A KG + K+VG++ER +R +FQ A + PS+IFFDEID L R +
Sbjct: 605 ETG---LNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTA--NRGE 659
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
D + VV+ LL +DG+++ +V+V+ ATNRP+ +DPAL RPGR DR +Y P+ E R
Sbjct: 660 DNSSDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEAR 719
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAA 924
I+ + E+ K L IA +T G +GA++ ALC +A +IA+ + +EI A
Sbjct: 720 KQIVKIQAEKM-KFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEAKEICQAH 778
Query: 925 AEKAFCSKR 933
+ A + R
Sbjct: 779 FKTALLALR 787
Score = 38 (18.4 bits), Expect = 4.0e-43, Sum P(2) = 4.0e-43
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 225 EELEVVRNEREDSKTIPESVVGNE 248
E +++V + +++ IPES++ E
Sbjct: 99 EGIKIVASLSSNNEPIPESLIRKE 122
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 486 (176.1 bits), Expect = 4.0e-43, Sum P(3) = 4.0e-43
Identities = 101/250 (40%), Positives = 152/250 (60%)
Query: 671 IGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPG 730
I D +S G++ + G + + ++E+V LPL +P+ F ++G+ PPRG+L++G PG
Sbjct: 209 INREDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPG 268
Query: 731 TGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFF 790
TGKTL+ RA+ +F G + + K G++E LR F+ AEK P+IIF
Sbjct: 269 TGKTLMARAVANETGA-----FFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFI 323
Query: 791 DEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRF 850
DEID +AP R + + VVS LL LMDG+K+R +VVV+ ATNRP ++DPALRR GRF
Sbjct: 324 DEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRF 383
Query: 851 DREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIA 910
DRE+ +P R IL +HT+ K L+ IAA T G+ G+DL +LC++AA+
Sbjct: 384 DREVDVGIPDPTGRLEILRIHTKNM-KLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQ 442
Query: 911 LKRNFPLQEI 920
++ + ++
Sbjct: 443 IREKMDMIDL 452
Score = 420 (152.9 bits), Expect = 2.1e-35, Sum P(2) = 2.1e-35
Identities = 92/231 (39%), Positives = 138/231 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL++V R ++E V +P++Y E F G+TP +GVL G PGTGKTL+ +A+ C
Sbjct: 496 WEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANEC 555
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + KG + L + G++E +R +F A P ++F DE+D +A R
Sbjct: 556 SAN-----FISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASA 610
Query: 805 DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSME 862
+ VV+ LL MDG+ S+ +V VIGATNRP+ +DPAL RPGR D+ IY PLP E
Sbjct: 611 GDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEE 670
Query: 863 DRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALK 912
R +IL T+ PV + L+ +A T GF+GADL+ + +A +A+K
Sbjct: 671 ARFSILQ--TQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIK 719
Score = 46 (21.3 bits), Expect = 4.0e-43, Sum P(3) = 4.0e-43
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 50 DEAAETGSAARNLELRRSSRVRRAPVLLDVSPSP 83
DE E G A N +R + RVR ++ ++P P
Sbjct: 94 DEEMEDGVARINRVVRNNLRVRLGDIVT-INPCP 126
Score = 44 (20.5 bits), Expect = 4.0e-43, Sum P(3) = 4.0e-43
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG+G+ LA + + N + ++ +L ++
Sbjct: 529 TPSKG----VLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSM 570
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 488 (176.8 bits), Expect = 4.3e-43, Sum P(3) = 4.3e-43
Identities = 106/267 (39%), Positives = 161/267 (60%)
Query: 675 DSDSGKLFE-GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGK 733
+ + L E G++ + G + + ++E+V LPL +P+ F ++G+ PPRG+L++G PGTGK
Sbjct: 213 EDEENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGK 272
Query: 734 TLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEI 793
TL+ RA+ +F G + + K G++E LR F+ AEK P+IIF DEI
Sbjct: 273 TLMARAVANETGA-----FFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEI 327
Query: 794 DGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDRE 853
D +AP R + + VVS LL LMDG+K+R +VVV+ ATNRP ++DPALRR GRFDRE
Sbjct: 328 DSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDRE 387
Query: 854 IYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ +P R ILS+HT+ K L+ IAA T G+ G+DL +LC++AA+ ++
Sbjct: 388 VDIGIPDPTGRLEILSIHTKNM-KLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIRE 446
Query: 914 NFPLQEILSAAAE-KAFCSKRVTLPSF 939
L ++ + + S VT+ +F
Sbjct: 447 KMDLIDLDEDTIDAEVLDSLGVTMENF 473
Score = 405 (147.6 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 92/234 (39%), Positives = 137/234 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL++V R + E V P+ +PE F GL+P RGVL +G PGTGKT++ +A+ C
Sbjct: 498 WEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANEC 557
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
A + + KG + L + G++E +R +F A P ++F DE+D +A R
Sbjct: 558 AAN-----FISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSV 612
Query: 805 -DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D +S VV+ LL MDG+ S+ +V VIGATNRPE +D AL RPGR D +Y PLP
Sbjct: 613 GDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQ 672
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRN 914
R IL + PV + +++IA++T GF+GADL + +A +A+K +
Sbjct: 673 ASREGILKAQLRK--TPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKES 724
Score = 46 (21.3 bits), Expect = 4.3e-43, Sum P(3) = 4.3e-43
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 48 DDDEAAETGSAARNLELRRSSRVRRAPVLLDVSPSPVKKRRK 89
DDD + GSA N +R + RV+ ++ V P P K K
Sbjct: 95 DDD--LDDGSARINRVVRHNLRVKHGDIIT-VHPCPDIKYAK 133
Score = 42 (19.8 bits), Expect = 4.3e-43, Sum P(3) = 4.3e-43
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 1096 QNISCTASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
Q + S+G VL G PG+G+ LA + + N + ++ +L ++
Sbjct: 526 QKFGLSPSRG----VLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSM 572
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 488 (176.8 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 111/272 (40%), Positives = 157/272 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTL+ RA+
Sbjct: 218 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 277
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK P+IIF DE+D +AP R +
Sbjct: 278 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 332
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P
Sbjct: 333 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 392
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A T G GADL ALC++AA+ A+++ L ++
Sbjct: 393 RLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL--- 448
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
E V + S AV D+ ALS S P
Sbjct: 449 --EDETIDAEV-MNSLAVTMDDFRWALSQSNP 477
Score = 418 (152.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 97/266 (36%), Positives = 154/266 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV R ++E+V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 492 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 551
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 552 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 606
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 607 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 666
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+ R AIL + + PV + L+++A T GF+GADL +C +A +A++ + EI
Sbjct: 667 KSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE-SEI 723
Query: 921 LSAAAEKAFCSKRVTLPS-FAVEERD 945
E+ +R T PS VEE D
Sbjct: 724 ---RRER----ERQTNPSAMEVEEDD 742
Score = 46 (21.3 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 525 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 566
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 491 (177.9 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 104/245 (42%), Positives = 152/245 (62%)
Query: 677 DSGKLFE-GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTL 735
D +L E G++ V G++ + ++E+V LPL +P+ F ++G+ PP+G+LL+G PG+GKTL
Sbjct: 197 DEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 256
Query: 736 VVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDG 795
+ RA+ +F G + + K G++E LR F+ AEK PSIIF DEID
Sbjct: 257 IARAVANETGA-----FFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDS 311
Query: 796 LAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIY 855
+AP R + + +VS LL LMDGLKSR V+V+GATNRP ++DPALRR GRFDREI
Sbjct: 312 IAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREID 371
Query: 856 FPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNF 915
+P R +L +HT+ K L+ I+ T G+ GADL ALCT+AA+ ++
Sbjct: 372 IGVPDEIGRLEVLRIHTKNM-KLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKM 430
Query: 916 PLQEI 920
+ ++
Sbjct: 431 DVIDL 435
Score = 389 (142.0 bits), Expect = 3.1e-31, Sum P(2) = 3.1e-31
Identities = 83/234 (35%), Positives = 134/234 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL++V R ++E V P+ +PE F+ G++P +GVL +G PG GKTL+ +A+ C
Sbjct: 479 WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC 538
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 539 QAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSA 593
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ LL MDG+ ++ +V +IGATNRP+ +D AL RPGR D+ IY PLP
Sbjct: 594 GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDE 653
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRN 914
+ R I + PV + + +A T GF+GAD+ +C +A A++ N
Sbjct: 654 DSRLNIFKACLRK--SPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIREN 705
Score = 42 (19.8 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 1096 QNISCTASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
+ + SKG VL G PG G+ LA + + N + ++ +L T+
Sbjct: 507 EKFGMSPSKG----VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 553
Score = 39 (18.8 bits), Expect = 3.1e-31, Sum P(2) = 3.1e-31
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 541 AALCRGRALKCTR 553
AALC AL+C R
Sbjct: 415 AALCTEAALQCIR 427
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 490 (177.5 bits), Expect = 4.8e-43, Sum P(2) = 4.8e-43
Identities = 103/245 (42%), Positives = 152/245 (62%)
Query: 677 DSGKLFE-GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTL 735
D +L E G++ V G++ + ++E+V LPL +P+ F ++G+ PP+G+LL+G PG+GKTL
Sbjct: 198 DEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 257
Query: 736 VVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDG 795
+ RA+ +F G + + K G++E LR F+ AEK PSIIF DEID
Sbjct: 258 IARAVANETGA-----FFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDS 312
Query: 796 LAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIY 855
+AP R + + +VS LL LMDGLKSR V+V+GATNRP ++DPALRR GRFDREI
Sbjct: 313 IAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREID 372
Query: 856 FPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNF 915
+P R +L +HT+ K L+ ++ T G+ GADL ALCT+AA+ ++
Sbjct: 373 IGVPDEIGRLEVLRIHTKNM-KLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKM 431
Query: 916 PLQEI 920
+ ++
Sbjct: 432 DVIDL 436
Score = 401 (146.2 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 85/234 (36%), Positives = 136/234 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL++V R ++E V P+ +PE F+ G++P +GVL +G PG GKTL+ +A+ C
Sbjct: 480 WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC 539
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 540 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSV 594
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ LL MDG+ ++ +V +IGATNRP+ +DPAL RPGR D+ IY PLP
Sbjct: 595 GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDE 654
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRN 914
E R I + PV + L+ +A T GF+GAD+ +C ++ A++ N
Sbjct: 655 ESRYQIFKSCLRK--SPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIREN 706
Score = 43 (20.2 bits), Expect = 4.8e-43, Sum P(2) = 4.8e-43
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 1096 QNISCTASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
+ + SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 508 EKFGMSPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 554
Score = 39 (18.8 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 541 AALCRGRALKCTR 553
AALC AL+C R
Sbjct: 416 AALCTEAALQCIR 428
>UNIPROTKB|F1SCW5 [details] [associations]
symbol:F1SCW5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074694
EMBL:CU467526 EMBL:CU928810 Ensembl:ENSSSCT00000009401 OMA:WNISAGQ
Uniprot:F1SCW5
Length = 528
Score = 415 (151.1 bits), Expect = 5.7e-43, Sum P(3) = 5.7e-43
Identities = 76/124 (61%), Positives = 95/124 (76%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+S+ GL I +KE+V+ PLLYPE F+ + PPRG L +G PGTGKTLV RAL C
Sbjct: 404 FDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANEC 463
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++GDK++A+F RKGADCL K+VG++ERQLRLLF A +PSIIFFDEIDGLAP R+ +Q
Sbjct: 464 SQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQ 523
Query: 805 DQTH 808
DQ H
Sbjct: 524 DQIH 527
Score = 56 (24.8 bits), Expect = 5.7e-43, Sum P(3) = 5.7e-43
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 647 EDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDV 694
++E F +R+ K + R R P+ + D SG L E + A L DV
Sbjct: 346 DEERFERRKSKSMARARNRCLPMNLRAEDLASGILRERVKVGASLADV 393
Score = 44 (20.5 bits), Expect = 5.7e-43, Sum P(3) = 5.7e-43
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 155 EMDEDAESEV-G-MEKGSEGGDLVVSKAE 181
E+ + E EV G +E E GD+ V +AE
Sbjct: 253 EVSTEGEEEVCGKLESQEEDGDIEVEEAE 281
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 486 (176.1 bits), Expect = 6.0e-43, Sum P(2) = 6.0e-43
Identities = 111/272 (40%), Positives = 157/272 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTL+ RA+
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK P+IIF DE+D +AP R +
Sbjct: 262 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTG 376
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A T G GADL ALC++AA+ A+++ L ++
Sbjct: 377 RLEILQIHTKNM-KLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL--- 432
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
E V + S AV D+ ALS S P
Sbjct: 433 --EDETIDAEV-MNSLAVTMDDFRWALSQSNP 461
Score = 415 (151.1 bits), Expect = 2.9e-35, P = 2.9e-35
Identities = 97/266 (36%), Positives = 153/266 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV R ++E+V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 536 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+ R AIL + + PV + L ++A T GF+GADL +C +A +A++ + EI
Sbjct: 651 KSRIAILKANLRK--SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE-NEI 707
Query: 921 LSAAAEKAFCSKRVTLPS-FAVEERD 945
E+ +R T PS VEE D
Sbjct: 708 ---RRER----ERQTNPSAMEVEEDD 726
Score = 46 (21.3 bits), Expect = 6.0e-43, Sum P(2) = 6.0e-43
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 509 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 550
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 486 (176.1 bits), Expect = 6.0e-43, Sum P(2) = 6.0e-43
Identities = 111/272 (40%), Positives = 157/272 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTL+ RA+
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK P+IIF DE+D +AP R +
Sbjct: 262 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTG 376
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A T G GADL ALC++AA+ A+++ L ++
Sbjct: 377 RLEILQIHTKNM-KLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL--- 432
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
E V + S AV D+ ALS S P
Sbjct: 433 --EDETIDAEV-MNSLAVTMDDFRWALSQSNP 461
Score = 408 (148.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 85/234 (36%), Positives = 139/234 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV R ++E+V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 476 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 535
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 536 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ + +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 591 GDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRN 914
+ R AIL + + PV + + ++A T GF+GADL +C +A +A++ +
Sbjct: 651 KSRMAILKANLRK--SPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRES 702
Score = 46 (21.3 bits), Expect = 6.0e-43, Sum P(2) = 6.0e-43
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 509 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 550
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 488 (176.8 bits), Expect = 9.8e-43, Sum P(2) = 9.8e-43
Identities = 101/237 (42%), Positives = 148/237 (62%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ V G++ + ++E+V LPL +P+ F ++G+ PP+G+LL+G PG+GKTL+ RA+
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK PSIIF DEID +AP R +
Sbjct: 265 TGA-----FFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 319
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLKSR V+V+GATNRP ++DPALRR GRFDREI +P
Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 379
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
R +L +HT+ K L+ I+ T G+ GADL ALCT+AA+ ++ + ++
Sbjct: 380 RLEVLRIHTKNM-KLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDL 435
Score = 380 (138.8 bits), Expect = 3.1e-30, Sum P(2) = 3.1e-30
Identities = 86/237 (36%), Positives = 137/237 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GL++V R ++E V P+ +PE F+ G++P +GVL +G PG GKTL+ +A+ C
Sbjct: 479 WNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC 538
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 539 QAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGS 593
Query: 805 --DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
D ++ V++ LL MDG+ ++ +V +IGATNRP+ +D AL RPGR D+ IY PLP
Sbjct: 594 GGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPD 653
Query: 861 MEDRAAILSLHTERWP--KPVT-GSLLKWIAARTAGFAGADLQALCTQAAIIALKRN 914
+ R I + P K V G+L K+ T GF+GAD+ +C +A A++ N
Sbjct: 654 EDSRLNIFKAALRKSPIAKDVDIGALAKY----TQGFSGADITEICQRACKYAIREN 706
Score = 42 (19.8 bits), Expect = 9.8e-43, Sum P(2) = 9.8e-43
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 1096 QNISCTASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
+ + SKG VL G PG G+ LA + + N + ++ +L T+
Sbjct: 507 EKFGMSPSKG----VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 553
Score = 39 (18.8 bits), Expect = 3.1e-30, Sum P(2) = 3.1e-30
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 541 AALCRGRALKCTR 553
AALC AL+C R
Sbjct: 415 AALCTEAALQCIR 427
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 486 (176.1 bits), Expect = 9.8e-43, Sum P(2) = 9.8e-43
Identities = 114/272 (41%), Positives = 157/272 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTLV RA+
Sbjct: 204 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVANE 263
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK P+IIF DE+D +AP R +
Sbjct: 264 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 318
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK R VVV+ ATNRP +VD ALRR GRFDREI +P
Sbjct: 319 HGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTG 378
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ I+A T G GADL ALC++AA+ A+++ L ++
Sbjct: 379 RLEILQIHTKNM-KLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLEDD 437
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
+ + L S AV D+ ALS S P
Sbjct: 438 SIDADL------LNSLAVTMDDFKWALSQSNP 463
Score = 416 (151.5 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 88/232 (37%), Positives = 138/232 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL +V R ++E+V P+ YP+ F G+TP RGVL +G PG GKTL+ +A+ C
Sbjct: 478 WEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANEC 537
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P I+FFDE+D +A R
Sbjct: 538 QAN-----FVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGA 592
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP M
Sbjct: 593 GDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDM 652
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALK 912
R AIL + + PV + L +++ T GF+GADL +C +A +A++
Sbjct: 653 PSRTAILRANLRK--SPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIR 702
Score = 44 (20.5 bits), Expect = 9.8e-43, Sum P(2) = 9.8e-43
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T S+G VL G PG G+ LA + + N V I+ +L T+
Sbjct: 511 TPSRG----VLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTM 552
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 492 (178.3 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 102/247 (41%), Positives = 153/247 (61%)
Query: 675 DSDSGKLFE-GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGK 733
+ + L E G++ + G + + ++E+V LPL +P+ F ++G+ PP+G+L++G PGTGK
Sbjct: 203 EDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGK 262
Query: 734 TLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEI 793
T++ RA+ +F G + + K G++E LR F+ AEK PSIIF DEI
Sbjct: 263 TIMARAVANETGA-----FFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEI 317
Query: 794 DGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDRE 853
D +AP R + + VVS LL LMDG+K+R +VVVI ATNRP ++DPALRR GRFDRE
Sbjct: 318 DSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDRE 377
Query: 854 IYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ +P E R IL +HT+ K L+ IA+ T GF GAD+ +LC++AA+ ++
Sbjct: 378 VDIGVPDAEGRLEILRIHTKNM-KLADDVDLEAIASETHGFVGADIASLCSEAAMQQIRE 436
Query: 914 NFPLQEI 920
L ++
Sbjct: 437 KMDLIDL 443
Score = 393 (143.4 bits), Expect = 8.0e-33, P = 8.0e-33
Identities = 98/267 (36%), Positives = 147/267 (55%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ + GL ++ +KE V P+L+P+ + GL P +GVL G PGTGKTL+ +A+
Sbjct: 487 WDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEV 546
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + KG + L + G++E +R +F A P+++F DE+D +A R
Sbjct: 547 SAN-----FISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSH 601
Query: 805 -DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D +S VV+ LL MDG+ ++ +V VIGATNRP+ +DPAL RPGR D+ IY PLP
Sbjct: 602 GDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDE 661
Query: 862 EDRAAILSLHTERWP-KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQ-E 919
R +IL P +P G L IA T GF+GADL + ++A A+K + Q +
Sbjct: 662 PARLSILQAQLRNTPLEP--GLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVK 719
Query: 920 ILSAAAEKAFC-SKRVTLPSFAVEERD 945
I EK ++ V + VEE D
Sbjct: 720 INKIKEEKEKVKTEDVDMKVDEVEEED 746
Score = 37 (18.1 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
VL G PG+G+ LA + N + ++ +L ++
Sbjct: 525 VLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSM 561
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 492 (178.3 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 102/247 (41%), Positives = 153/247 (61%)
Query: 675 DSDSGKLFE-GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGK 733
+ + L E G++ + G + + ++E+V LPL +P+ F ++G+ PP+G+L++G PGTGK
Sbjct: 203 EDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGK 262
Query: 734 TLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEI 793
T++ RA+ +F G + + K G++E LR F+ AEK PSIIF DEI
Sbjct: 263 TIMARAVANETGA-----FFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEI 317
Query: 794 DGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDRE 853
D +AP R + + VVS LL LMDG+K+R +VVVI ATNRP ++DPALRR GRFDRE
Sbjct: 318 DSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDRE 377
Query: 854 IYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ +P E R IL +HT+ K L+ IA+ T GF GAD+ +LC++AA+ ++
Sbjct: 378 VDIGVPDAEGRLEILRIHTKNM-KLADDVDLEAIASETHGFVGADIASLCSEAAMQQIRE 436
Query: 914 NFPLQEI 920
L ++
Sbjct: 437 KMDLIDL 443
Score = 393 (143.4 bits), Expect = 8.0e-33, P = 8.0e-33
Identities = 98/267 (36%), Positives = 147/267 (55%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ + GL ++ +KE V P+L+P+ + GL P +GVL G PGTGKTL+ +A+
Sbjct: 487 WDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEV 546
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + KG + L + G++E +R +F A P+++F DE+D +A R
Sbjct: 547 SAN-----FISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSH 601
Query: 805 -DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D +S VV+ LL MDG+ ++ +V VIGATNRP+ +DPAL RPGR D+ IY PLP
Sbjct: 602 GDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDE 661
Query: 862 EDRAAILSLHTERWP-KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQ-E 919
R +IL P +P G L IA T GF+GADL + ++A A+K + Q +
Sbjct: 662 PARLSILQAQLRNTPLEP--GLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVK 719
Query: 920 ILSAAAEKAFC-SKRVTLPSFAVEERD 945
I EK ++ V + VEE D
Sbjct: 720 INKIKEEKEKVKTEDVDMKVDEVEEED 746
Score = 37 (18.1 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
VL G PG+G+ LA + N + ++ +L ++
Sbjct: 525 VLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSM 561
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 480 (174.0 bits), Expect = 1.6e-42, P = 1.6e-42
Identities = 105/243 (43%), Positives = 151/243 (62%)
Query: 675 DSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKT 734
D D+ +L ++ + GL ++ ++E++ LPL PE F + G++PPRGVLL+G PGTGKT
Sbjct: 337 DQDN-QLKVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKT 395
Query: 735 LVVRALIGSCARGDKRIAYFAR-KGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEI 793
++ RA+ AY + G + + K+ G+ E +LR +F A PSIIF DE+
Sbjct: 396 MIARAVANEVG------AYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDEL 449
Query: 794 DGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGS---VVVIGATNRPEAVDPALRRPGRF 850
D L P R Q++ VV++LL LMDG+ S GS V+V+GATNRP A+D ALRRPGRF
Sbjct: 450 DALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRF 509
Query: 851 DREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIA 910
D+EI +P+ +DR IL R P +T + L +A G+ GADL+ALC +A + A
Sbjct: 510 DKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYA 569
Query: 911 LKR 913
L+R
Sbjct: 570 LRR 572
Score = 292 (107.8 bits), Expect = 6.6e-22, P = 6.6e-22
Identities = 62/164 (37%), Positives = 98/164 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GL+++ +K+ V PL +PE F +G+ PP+GVLL+G PG KT++ +AL
Sbjct: 620 WSDIGGLENIKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALAN-- 677
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + A KG + + KYVG++ER +R +F+ A PSIIFFDE+D LA R
Sbjct: 678 ---ESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSS 734
Query: 805 DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRR 846
+ + V++ LL MDG++ V ++ ATNRP+ +D L R
Sbjct: 735 GAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKELLR 778
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 476 (172.6 bits), Expect = 4.3e-42, P = 4.3e-42
Identities = 104/244 (42%), Positives = 149/244 (61%)
Query: 674 SDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGK 733
S + +L ++ + GL ++ ++E++ LPL PE F + G+ PPRGVLL+G PGTGK
Sbjct: 332 SKDQANQLKVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGK 391
Query: 734 TLVVRALIGSCARGDKRIAYFAR-KGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDE 792
T++ RA+ AY + G + + K+ G+ E +LR +F A PSIIF DE
Sbjct: 392 TMIARAVANEVG------AYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDE 445
Query: 793 IDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGS---VVVIGATNRPEAVDPALRRPGR 849
+D L P R Q++ VV++LL LMDG+ S GS V+V+GATNRP A+D ALRRPGR
Sbjct: 446 LDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGR 505
Query: 850 FDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAII 909
FD+EI +P+ +DR IL R P +T + L +A G+ GADL+ALC +A +
Sbjct: 506 FDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLH 565
Query: 910 ALKR 913
AL+R
Sbjct: 566 ALRR 569
Score = 289 (106.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 61/159 (38%), Positives = 97/159 (61%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GL++V +K+ V PL +PE F +G+ PP+GVLL+G PG KT++ +AL
Sbjct: 617 WSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALAN-- 674
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + A KG + + KYVG++ER +R +F+ A PSIIFFDE+D LA R
Sbjct: 675 ---ESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSS 731
Query: 805 DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVD 841
+ + V++ LL MDG++ +V ++ ATNRP+ +D
Sbjct: 732 GAGNVADRVLAQLLTEMDGIEQLKNVTILAATNRPDRID 770
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 476 (172.6 bits), Expect = 6.3e-42, Sum P(2) = 6.3e-42
Identities = 103/242 (42%), Positives = 148/242 (61%)
Query: 675 DSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKT 734
DSD G ++ + GL ++ ++E V LPL E F + G++PPRGVLL+G PGTGKT
Sbjct: 308 DSDHGPQVT-YDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKT 366
Query: 735 LVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEID 794
L+ +A+ I G + + K+ G++E +LR +F A +PSIIF DE+D
Sbjct: 367 LIAKAIANEVGAHVTVI-----NGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELD 421
Query: 795 GLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGS---VVVIGATNRPEAVDPALRRPGRFD 851
L P R Q++ VV++LL LMDG+ S GS +VV+GATNRP A+D ALRRPGRFD
Sbjct: 422 ALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFD 481
Query: 852 REIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIAL 911
+EI +P+ +DR IL ++ P +T + + +A G+ GADL ALC +A + AL
Sbjct: 482 KEIEIGIPNAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEAGLYAL 541
Query: 912 KR 913
+R
Sbjct: 542 RR 543
Score = 234 (87.4 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 47/113 (41%), Positives = 72/113 (63%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GL+DV +K+ V PL +P+ F +G+ PP+GVLL+G PG KT++ +AL
Sbjct: 591 WSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALAH-- 648
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLA 797
+ + + A KG + + KYVG++ER +R +F+ A PSI+FFDEID LA
Sbjct: 649 ---ESGLNFLAVKGPELMNKYVGESERAVREIFRKARMVSPSILFFDEIDALA 698
Score = 39 (18.8 bits), Expect = 6.3e-42, Sum P(2) = 6.3e-42
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 1110 VLISGSPGSGQRHLAACLLH 1129
VL+ G PG + +A L H
Sbjct: 629 VLLYGPPGCSKTMIAKALAH 648
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 477 (173.0 bits), Expect = 7.2e-42, Sum P(3) = 7.2e-42
Identities = 99/233 (42%), Positives = 140/233 (60%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ V GL I +K + LPL P F + G++PPRG+LLHG PGTGKT+++R + S
Sbjct: 228 YDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSI 287
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
G + KY+G+ E +R +F A+K QPSIIF DEID +AP RT
Sbjct: 288 TEAH----VLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRTSDD 343
Query: 805 D-QTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+T S VV+ LL +MDG+ G +VVIGATNRP ++D ALRRPGRFD+E+ +P +E
Sbjct: 344 SGETESRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEA 403
Query: 864 RAAILSLHTERWPKP---VTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
R IL+ + +T + IA++T G+ GADL ALC ++ + A+ R
Sbjct: 404 REEILTKQFAKMNSEKCQITKEEIASIASKTHGYVGADLTALCRESVMKAINR 456
Score = 391 (142.7 bits), Expect = 8.0e-31, Sum P(3) = 8.0e-31
Identities = 91/233 (39%), Positives = 138/233 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G +++ R + EVV LPL + F NLG++ P+GVLL+G PG KTL +AL
Sbjct: 498 WSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALAT-- 555
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + A KG + KYVG++ER +R +F+ A PSIIFFDEID +A R
Sbjct: 556 ---ESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIAGDRDGDS 612
Query: 805 DQTHSS-VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
T +S V+++LL +DG++ VV++GATN+P +DPAL RPGR DR IY P +
Sbjct: 613 STTAASNVLTSLLNEIDGVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDA 672
Query: 864 RAAILSLHTERWP-KPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRN 914
R IL + ++ + S+ L+ +A T G +GA++ LC +A + A+ N
Sbjct: 673 RLQILQKCSRKFNLQSGDESVDLQKLAELTDGCSGAEVTLLCQEAGLAAIMEN 725
Score = 46 (21.3 bits), Expect = 7.2e-42, Sum P(3) = 7.2e-42
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 1035 NDFLEEADIA-KEIERRLQYAGIITGEASFSGLDAFAGDSNDDCANSKPS 1083
N ++ E++ A +EI R+ + A F +DA AGD + D + + S
Sbjct: 571 NKYVGESERAIREIFRKARAAS--PSIIFFDEIDAIAGDRDGDSSTTAAS 618
Score = 38 (18.4 bits), Expect = 7.2e-42, Sum P(3) = 7.2e-42
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 6 ASSSSPKKRDGSVSGP 21
+S SS KK++ VS P
Sbjct: 2 SSKSSSKKKNNGVSTP 17
Score = 37 (18.1 bits), Expect = 8.0e-31, Sum P(3) = 8.0e-31
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 456 DGKPPKRLIQDAGDSENEV 474
D P R D+G++E+ V
Sbjct: 333 DSIAPSRTSDDSGETESRV 351
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 484 (175.4 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 101/250 (40%), Positives = 151/250 (60%)
Query: 671 IGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPG 730
I D ++ G++ + G + + ++E+V LPL +P+ F +G+ PPRGVL++G PG
Sbjct: 199 INREDEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPG 258
Query: 731 TGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFF 790
TGKTL+ RA+ +F G + + K G++E LR F+ AEK P+IIF
Sbjct: 259 TGKTLMARAVANETGA-----FFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFI 313
Query: 791 DEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRF 850
DEID +AP R + + VVS LL LMDG+K+R +VVVI ATNRP ++DPALRR GRF
Sbjct: 314 DEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRF 373
Query: 851 DREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIA 910
DRE+ +P R +L +HT+ K L+ +AA T G+ GAD+ +LC++AA+
Sbjct: 374 DREVDIGIPDATGRLEVLRIHTKNM-KLADDVDLEALAAETHGYVGADIASLCSEAAMQQ 432
Query: 911 LKRNFPLQEI 920
++ L ++
Sbjct: 433 IREKMDLIDL 442
Score = 395 (144.1 bits), Expect = 5.0e-33, P = 5.0e-33
Identities = 90/232 (38%), Positives = 137/232 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ V GL ++ +KE V P+L+P+ + GL+P +GVL +G PGTGKTL+ +A+
Sbjct: 486 WDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEV 545
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + KG + L + G++E +R +F A P+++F DE+D +A R
Sbjct: 546 SAN-----FISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSL 600
Query: 805 -DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D +S VV+ LL MDG+ ++ +V VIGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 601 GDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDE 660
Query: 862 EDRAAILSLHTERWP-KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
R +IL+ + P +P G L IA T GF+GADL + +AA A+K
Sbjct: 661 NARLSILNAQLRKTPLEP--GLELTAIAKATQGFSGADLLYIVQRAAKYAIK 710
Score = 37 (18.1 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
VL G PG+G+ LA + N + ++ +L ++
Sbjct: 524 VLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSM 560
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 440 (159.9 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 95/233 (40%), Positives = 143/233 (61%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 181 ETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 241 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYD 295
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 296 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 355
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I ++HT R +L + I A+ +GAD++A+CT+A ++AL+
Sbjct: 356 DEKTKRRIFTIHTSRMTLAEDVNLSELIMAKD-DLSGADIKAICTEAGLMALR 407
Score = 39 (18.8 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 24/118 (20%), Positives = 39/118 (33%)
Query: 400 GSSDHQKDDFLAMLEEKPVECENAPKVDAFNPGSDSTLGWPRIKQGRRCGLCGCGNDGKP 459
G + +KDD + +P K G D+ + P++ RC L +
Sbjct: 9 GGAGEKKDDKDKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIK 68
Query: 460 PKRLIQDAGDSENEVYSGSSASEEPNYDIWDGFGDEPGWLGRLLGPINDRYGIAGTWV 517
+++D E E D P +G L I+D + I T V
Sbjct: 69 DYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSV 126
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 481 (174.4 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 109/270 (40%), Positives = 157/270 (58%)
Query: 674 SDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGK 733
S+ + + ++ + GL ++ ++E++ LPL PE F + G+ PPRGVLL+G PGTGK
Sbjct: 341 SEEEDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGK 400
Query: 734 TLVVRALIGSCARGDKRIAYFAR-KGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDE 792
T++ RA+ AY + G + + K+ G+ E +LR +F A PSIIF DE
Sbjct: 401 TMIARAVANEVG------AYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDE 454
Query: 793 IDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGS---VVVIGATNRPEAVDPALRRPGR 849
+D L P R Q++ VV++LL LMDG+ S GS V+V+GATNRP A+D ALRRPGR
Sbjct: 455 LDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGR 514
Query: 850 FDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAII 909
FD+EI +P+ DR IL +R P +T L +A G+ GADL+ALC +A +
Sbjct: 515 FDKEIEIGVPNAADRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLY 574
Query: 910 ALKRNFPLQEILSAAAEKAFCSKRVTLPSF 939
AL+R Q LS + ++TL F
Sbjct: 575 ALRRVLNKQPNLSDSKMAGLV--KITLNDF 602
Score = 406 (148.0 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 89/239 (37%), Positives = 141/239 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GL+++ +K+ V PL +PE F +G+ PP+GVLL+G PG KT++ +AL
Sbjct: 626 WSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALAN-- 683
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + A KG + + KYVG++ER +R +F+ A PSIIFFDE+D LA R
Sbjct: 684 ---ESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFDELDALAIERGSSS 740
Query: 805 DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSME 862
+ + V++ LL MDG++ V ++ ATNRP+ +D AL RPGR DR IY PLP
Sbjct: 741 GAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAA 800
Query: 863 DRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
R IL+L P ++ + L + +T ++GA++ A+C +AA++AL+ + I
Sbjct: 801 TRREILNLQFHSMP--ISNDVNLDELIFQTDTYSGAEIIAVCREAALLALEEDIQANSI 857
Score = 41 (19.5 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 919 EILSAAAEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSK 959
EI++ E A + + + ++ R + ALS P SK
Sbjct: 835 EIIAVCREAALLALEEDIQANSITRRHFTRALSTVTPRISK 875
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 441 (160.3 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 96/260 (36%), Positives = 154/260 (59%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL+ I+ +KE V LPL +PE ++++G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 190 ESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVAN 249
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R +F+VAE+ PSI+F DEID + R
Sbjct: 250 ETSATFLRVV-----GSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYE 304
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR +++DPAL RPGR DR+I P P
Sbjct: 305 ATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNP 364
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK-RNFPL- 917
+ + I +HT + L +++ ++ +GAD++A+CT+A ++AL+ R +
Sbjct: 365 DTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDE-LSGADIKAICTEAGLLALRERRMKIT 423
Query: 918 QEILSAAAEKAFCSKRVTLP 937
Q L A +KA K+ +P
Sbjct: 424 QADLRKARDKALFQKKGNIP 443
Score = 37 (18.1 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 33 ICEEEYAKNHGEPNEDDDE 51
+ EEEY N + DD+
Sbjct: 82 LLEEEYITNQEQIKSSDDK 100
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 441 (160.3 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 96/260 (36%), Positives = 154/260 (59%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL+ I+ +KE V LPL +PE ++++G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 190 ESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVAN 249
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R +F+VAE+ PSI+F DEID + R
Sbjct: 250 ETSATFLRVV-----GSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYE 304
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR +++DPAL RPGR DR+I P P
Sbjct: 305 ATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNP 364
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK-RNFPL- 917
+ + I +HT + L +++ ++ +GAD++A+CT+A ++AL+ R +
Sbjct: 365 DTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDE-LSGADIKAICTEAGLLALRERRMKIT 423
Query: 918 QEILSAAAEKAFCSKRVTLP 937
Q L A +KA K+ +P
Sbjct: 424 QADLRKARDKALFQKKGNIP 443
Score = 37 (18.1 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 33 ICEEEYAKNHGEPNEDDDE 51
+ EEEY N + DD+
Sbjct: 82 LLEEEYITNQEQIKSSDDK 100
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 474 (171.9 bits), Expect = 4.4e-41, Sum P(2) = 4.4e-41
Identities = 99/233 (42%), Positives = 140/233 (60%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ +V GL I +K + +PL P F + G++PPRG+LLHG PGTGKT+++R + +
Sbjct: 244 YAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANT- 302
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
G + KY+G+ E LR +F A K QPSIIF DEID +AP R
Sbjct: 303 ----SNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDD 358
Query: 805 D-QTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ S VV+TLL LMDG+ + G VVVI ATNRP +VDPALRRPGRFD+E+ +P ++
Sbjct: 359 SGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDA 418
Query: 864 RAAILSLHTERWPKP---VTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
R IL+ R + +K+IA++T G+ GADL ALC ++ + ++R
Sbjct: 419 RFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQR 471
Score = 427 (155.4 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 94/245 (38%), Positives = 143/245 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G +++ MKE++ LPL E F LG++ P+GVLL+G PG KTL +AL
Sbjct: 515 WSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALAT-- 572
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ I + A KG + KYVG++ER +R +F+ A PSIIFFDEID L+P R
Sbjct: 573 ---ESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSS 629
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
+ V+++LL +DG++ VV++ ATNRP+ +D AL RPGR DR IY P + R
Sbjct: 630 TSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNAR 689
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAA 924
IL T+++ +G L +A RT G++GA++ LC +A + A+ + + ++
Sbjct: 690 LEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVELRH 749
Query: 925 AEKAF 929
EKAF
Sbjct: 750 FEKAF 754
Score = 40 (19.1 bits), Expect = 4.4e-41, Sum P(2) = 4.4e-41
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 687 SVAGLQ--DVIRCMKEVVILPLL 707
+V LQ +++ CM+E VI LL
Sbjct: 130 TVGSLQGYNILECMEEKVIQKLL 152
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 468 (169.8 bits), Expect = 7.5e-41, Sum P(2) = 7.5e-41
Identities = 112/276 (40%), Positives = 155/276 (56%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTL+ RA+
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ EK P+IIF DE+D +A
Sbjct: 262 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFP 316
Query: 804 QDQTHSSV----VSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
QTH V VS LL LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P
Sbjct: 317 SPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 376
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQE 919
R IL +HT+ K L+ +A T G GADL ALC++AA+ A+++ L +
Sbjct: 377 DATGRLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 435
Query: 920 ILSAAAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
+ E V + S AV D+ ALS S P
Sbjct: 436 L-----EDETIDAEV-MNSLAVTMDDFRWALSQSNP 465
Score = 416 (151.5 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 97/266 (36%), Positives = 153/266 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV R ++E+V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 480 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 539
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 540 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 594
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 595 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 654
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+ R AIL + + PV + L ++A T GF+GADL +C +A +A++ + EI
Sbjct: 655 KSRVAILKANLRK--SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE-SEI 711
Query: 921 LSAAAEKAFCSKRVTLPS-FAVEERD 945
E+ +R T PS VEE D
Sbjct: 712 ---RRER----ERQTNPSAMEVEEDD 730
Score = 46 (21.3 bits), Expect = 7.5e-41, Sum P(2) = 7.5e-41
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 513 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 554
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 444 (161.4 bits), Expect = 9.4e-41, P = 9.4e-41
Identities = 95/260 (36%), Positives = 152/260 (58%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL+ ++ MKE + LPL +PE ++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 181 ESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVAN 240
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VA++C PSI+F DEID + R
Sbjct: 241 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYD 295
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
Q + T+L L+ DG +R V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 296 SQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 355
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK-RNFPLQ 918
++ + I +HT + +L +++ ++ +GAD++A+CT++ ++AL+ R +
Sbjct: 356 DIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKD-DLSGADIKAICTESGLLALRERRMRVT 414
Query: 919 EI-LSAAAEKAFCSKRVTLP 937
A EK K P
Sbjct: 415 HTDFKKAKEKVLYRKTAGAP 434
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 471 (170.9 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 100/233 (42%), Positives = 144/233 (61%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ + GL ++ ++E++ LPL PE F + G+ PRG+LL+G PGTGKT++ RA+
Sbjct: 352 YDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEV 411
Query: 745 ARGDKRIAYFAR-KGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
AY + G + + K+ G+ E +LR +F A PSIIF DE+D L P R
Sbjct: 412 G------AYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGA 465
Query: 804 QDQTHSSVVSTLLALMDGLKSRGS---VVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
Q + VV++LL LMDG+ S GS V+V+GATNRP+A+D ALRRPGRFD+EI +P+
Sbjct: 466 QSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 525
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
+DR IL R P +T + L +A G+ GADL+ALC +A + AL+R
Sbjct: 526 AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYALRR 578
Score = 285 (105.4 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 60/159 (37%), Positives = 97/159 (61%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GL+++ +K+ V PL +P+ F +G+ PP+GVLL+G PG KT++ +AL
Sbjct: 626 WSDIGGLENIKLKLKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALAN-- 683
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + A KG + + KYVG++ER +R +F+ A PSIIFFDE+D LA R
Sbjct: 684 ---ESGLNFLAIKGPELMNKYVGESERAVREVFRKARAVAPSIIFFDELDALAVERGSSS 740
Query: 805 DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVD 841
+ + V++ LL MDG++ +V V+ ATNRP+ +D
Sbjct: 741 GAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Score = 42 (19.8 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 901 ALCTQAAIIALKRN 914
A+C +AA++AL+ N
Sbjct: 783 AVCKEAALLALEEN 796
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 469 (170.2 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 103/257 (40%), Positives = 151/257 (58%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G++ + +KE+V LPL +P+ F +G+ PPRG+LL G PGTGKTL+ RA+
Sbjct: 208 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANE 267
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ EK QP+I+F DEID +AP R +
Sbjct: 268 TGS-----FFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKT 322
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDG+K R ++VVI ATNRP ++D ALRR GRFDREI +P
Sbjct: 323 NGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 382
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ IA GF GADL +LC++AA+ ++ L ++
Sbjct: 383 RLEILRIHTKNM-KLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDD 441
Query: 924 AAE-KAFCSKRVTLPSF 939
+ + S VT+ +F
Sbjct: 442 QIDAEVLNSLAVTMENF 458
Score = 391 (142.7 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 86/235 (36%), Positives = 137/235 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GLQ+V R ++E+V P+ +PE + G+ P RGVL +G PG GKTL+ +A+ C
Sbjct: 482 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 541
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A P ++FFDE+D +A R
Sbjct: 542 QAN-----FISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGA 596
Query: 805 --DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
D +S V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 597 GGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPD 656
Query: 861 MEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRN 914
R IL + P++ L L ++A T GF+GADL +C +A +A++ +
Sbjct: 657 EASRHQILKASLRK--TPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRES 709
Score = 42 (19.8 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
VL G PG G+ LA + + N + I+ +L T+
Sbjct: 520 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 556
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 469 (170.2 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 103/257 (40%), Positives = 151/257 (58%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G++ + +KE+V LPL +P+ F +G+ PPRG+LL G PGTGKTL+ RA+
Sbjct: 208 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANE 267
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ EK QP+I+F DEID +AP R +
Sbjct: 268 TGS-----FFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKT 322
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDG+K R ++VVI ATNRP ++D ALRR GRFDREI +P
Sbjct: 323 NGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 382
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ IA GF GADL +LC++AA+ ++ L ++
Sbjct: 383 RLEILRIHTKNM-KLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDD 441
Query: 924 AAE-KAFCSKRVTLPSF 939
+ + S VT+ +F
Sbjct: 442 QIDAEVLNSLAVTMENF 458
Score = 391 (142.7 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 86/235 (36%), Positives = 137/235 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GLQ+V R ++E+V P+ +PE + G+ P RGVL +G PG GKTL+ +A+ C
Sbjct: 482 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 541
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A P ++FFDE+D +A R
Sbjct: 542 QAN-----FISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGA 596
Query: 805 --DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
D +S V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 597 GGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPD 656
Query: 861 MEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRN 914
R IL + P++ L L ++A T GF+GADL +C +A +A++ +
Sbjct: 657 EASRHQILKASLRK--TPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRES 709
Score = 42 (19.8 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
VL G PG G+ LA + + N + I+ +L T+
Sbjct: 520 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 556
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 469 (170.2 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 100/257 (38%), Positives = 150/257 (58%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+L++G PGTGKTL+ RA+
Sbjct: 199 GYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANE 258
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F+ AEK P+IIF DEID +AP R +
Sbjct: 259 TGA-----FFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKT 313
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDG+K ++V+ ATNRP ++DPALRR GRFDREI +P
Sbjct: 314 HGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATG 373
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R +L +HT+ K L+ IAA + G GADL +LC++AA+ ++ L ++
Sbjct: 374 RLEVLRIHTKNM-KLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDD 432
Query: 924 AAE-KAFCSKRVTLPSF 939
+ + S VT+ +F
Sbjct: 433 KIDAEVLASLAVTMENF 449
Score = 393 (143.4 bits), Expect = 7.3e-33, P = 7.3e-33
Identities = 85/231 (36%), Positives = 135/231 (58%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
+ GL+ V + ++E+V P+ +P+ F G+ P RGVL +G PG GKTL+ +A+ C
Sbjct: 476 IGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN 535
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQT 807
+ + KG + L + G++E +R +F A P ++FFDE+D +A R
Sbjct: 536 -----FISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDA 590
Query: 808 HSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP + R
Sbjct: 591 GGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSR 650
Query: 865 AAILSLHTERWP--KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
AIL + + P K V L +IA T GF+GADL +C +A +A+++
Sbjct: 651 EAILKANLRKSPLAKEVD---LTYIAKVTQGFSGADLTEICQRACKLAIRQ 698
Score = 41 (19.5 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
VL G PG G+ LA + + N + ++ +L T+
Sbjct: 511 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 547
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 441 (160.3 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 96/233 (41%), Positives = 142/233 (60%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL + I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 241
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 242 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I +HT R SL I A+ +GAD++A+CT+A ++AL+
Sbjct: 357 DEKTKRRIFQIHTSRMTVAEDVSLDDLILAKD-DLSGADIKAICTEAGLMALR 408
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 423 (154.0 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 101/275 (36%), Positives = 152/275 (55%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ PV D G + + +V GL D IR ++E + LPL+ PE F +G+ PP+GVLL
Sbjct: 121 VDPVVYNMLHEDPGNI--SYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLL 178
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ + ++ A + KY+G++ R +R +F A + QP
Sbjct: 179 YGPPGTGKTLLARAIASNIDANFLKVVSSA-----IIDKYIGESARLIREMFNYAREHQP 233
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L+ DG + G V +I ATNRP+ +DP
Sbjct: 234 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDP 293
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQA 901
AL RPGR DR+I PLP+ + R IL +H K G + + I GF GADL+
Sbjct: 294 ALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKH--GEIDYEAIVKLAEGFNGADLRN 351
Query: 902 LCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+CT+A + A++ R++ + E A K +K++
Sbjct: 352 ICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKL 386
Score = 45 (20.9 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 116 KSVSPGVWGSRLRSRGRNVGFGAKSDESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDL 175
K + V +R RG F D+ L ++ E+ ++E + K S G
Sbjct: 26 KELESRVRTARENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRY 85
Query: 176 VVSKAEKLDRFK 187
VV K+D+ K
Sbjct: 86 VVGCRSKVDKEK 97
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 439 (159.6 bits), Expect = 3.2e-40, P = 3.2e-40
Identities = 95/233 (40%), Positives = 143/233 (61%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL + I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 181 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 241 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 295
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 296 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 355
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I +HT R +L + I A+ +GAD++A+CT+A ++AL+
Sbjct: 356 DEKTKKRIFQIHTSRMTLADDVTLDELIMAKD-DLSGADIKAICTEAGLMALR 407
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 439 (159.6 bits), Expect = 3.2e-40, P = 3.2e-40
Identities = 95/233 (40%), Positives = 143/233 (61%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL + I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 180 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 239
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 240 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 294
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 295 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 354
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I +HT R +L + I A+ +GAD++A+CT+A ++AL+
Sbjct: 355 DEKTKKRIFQIHTSRMTLADDVTLDELIMAKD-DLSGADIKAICTEAGLMALR 406
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 438 (159.2 bits), Expect = 4.1e-40, P = 4.1e-40
Identities = 95/233 (40%), Positives = 143/233 (61%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL + I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 242 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYD 296
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I +HT R +L + I A+ +GAD++A+CT+A ++AL+
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDELIMAKD-DLSGADIKAICTEAGLMALR 408
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 437 (158.9 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 95/233 (40%), Positives = 142/233 (60%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL + I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 242 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I +HT R +L I A+ +GAD++A+CT+A ++AL+
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKD-DLSGADIKAICTEAGLMALR 408
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 437 (158.9 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 95/233 (40%), Positives = 142/233 (60%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL + I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 242 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I +HT R +L I A+ +GAD++A+CT+A ++AL+
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKD-DLSGADIKAICTEAGLMALR 408
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 437 (158.9 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 95/233 (40%), Positives = 142/233 (60%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL + I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 109 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 168
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 169 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 223
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 224 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 283
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I +HT R +L I A+ +GAD++A+CT+A ++AL+
Sbjct: 284 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKD-DLSGADIKAICTEAGLMALR 335
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 437 (158.9 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 95/233 (40%), Positives = 142/233 (60%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL + I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 242 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I +HT R +L I A+ +GAD++A+CT+A ++AL+
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKD-DLSGADIKAICTEAGLMALR 408
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 437 (158.9 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 95/233 (40%), Positives = 142/233 (60%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL + I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 242 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I +HT R +L I A+ +GAD++A+CT+A ++AL+
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKD-DLSGADIKAICTEAGLMALR 408
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 437 (158.9 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 95/233 (40%), Positives = 142/233 (60%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL + I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 242 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I +HT R +L I A+ +GAD++A+CT+A ++AL+
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKD-DLSGADIKAICTEAGLMALR 408
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 437 (158.9 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 95/233 (40%), Positives = 142/233 (60%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL + I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 242 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I +HT R +L I A+ +GAD++A+CT+A ++AL+
Sbjct: 357 DEKTKKRIFQIHTSRMTLADDVTLDDLIMAKD-DLSGADIKAICTEAGLMALR 408
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 436 (158.5 bits), Expect = 6.7e-40, P = 6.7e-40
Identities = 95/233 (40%), Positives = 141/233 (60%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ +KE V LPL +PE+++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 182 ETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 241
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD + +R LF+VAE+ PSI+F DEID + R
Sbjct: 242 QTSATFLRVV-----GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYD 296
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG SRG V VI ATNR E +DPAL RPGR DR+I FPLP
Sbjct: 297 SNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + I +HT R +L I A+ +GAD++A+CT+A ++AL+
Sbjct: 357 DEKTKRRIFQIHTSRMTVADDVTLDDLILAKD-DLSGADIKAICTEAGLMALR 408
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 465 (168.7 bits), Expect = 9.7e-40, Sum P(3) = 9.7e-40
Identities = 104/257 (40%), Positives = 149/257 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G++ + +KE+V LPL +P+ F +G+ PPRG+LL G PGTGKTL+ RA+
Sbjct: 207 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANE 266
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F EK P+I+F DEID +AP R +
Sbjct: 267 TGA-----FFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKA 321
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK+R VVVI ATNRP ++D ALRR GRFDREI +P
Sbjct: 322 HGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 381
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A GF GADL +LC++AAI ++ L ++
Sbjct: 382 RLEILRIHTKNM-KLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDD 440
Query: 924 AAE-KAFCSKRVTLPSF 939
+ + S VT+ +F
Sbjct: 441 TIDAEVLNSLAVTMENF 457
Score = 394 (143.8 bits), Expect = 8.6e-32, Sum P(2) = 8.6e-32
Identities = 83/234 (35%), Positives = 134/234 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GLQ+V R ++E+V P+ +PE + G+ P RGVL +G PG GKTL+ +A+ C
Sbjct: 481 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 540
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A P ++FFDE+D +A R
Sbjct: 541 QAN-----FISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSV 595
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 596 GDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDE 655
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRN 914
R I + P++ L L ++A T GF+GADL +C +A +A++ +
Sbjct: 656 ASRLQIFKASLRK--TPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES 707
Score = 42 (19.8 bits), Expect = 9.7e-40, Sum P(3) = 9.7e-40
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
VL G PG G+ LA + + N + I+ +L T+
Sbjct: 519 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 555
Score = 39 (18.8 bits), Expect = 9.7e-40, Sum P(3) = 9.7e-40
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 456 DGKPPKRLIQDAGDSEN 472
D K P RLI D D+++
Sbjct: 25 DKKRPNRLIIDQSDNDD 41
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 465 (168.7 bits), Expect = 9.7e-40, Sum P(3) = 9.7e-40
Identities = 104/257 (40%), Positives = 149/257 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G++ + +KE+V LPL +P+ F +G+ PPRG+LL G PGTGKTL+ RA+
Sbjct: 207 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANE 266
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G++E LR F EK P+I+F DEID +AP R +
Sbjct: 267 TGA-----FFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKA 321
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK+R VVVI ATNRP ++D ALRR GRFDREI +P
Sbjct: 322 HGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 381
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A GF GADL +LC++AAI ++ L ++
Sbjct: 382 RLEILRIHTKNM-KLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDD 440
Query: 924 AAE-KAFCSKRVTLPSF 939
+ + S VT+ +F
Sbjct: 441 TIDAEVLNSLAVTMENF 457
Score = 394 (143.8 bits), Expect = 8.6e-32, Sum P(2) = 8.6e-32
Identities = 83/234 (35%), Positives = 134/234 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GLQ+V R ++E+V P+ +PE + G+ P RGVL +G PG GKTL+ +A+ C
Sbjct: 481 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 540
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A P ++FFDE+D +A R
Sbjct: 541 QAN-----FISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSV 595
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 596 GDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDE 655
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRN 914
R I + P++ L L ++A T GF+GADL +C +A +A++ +
Sbjct: 656 ASRLQIFKASLRK--TPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES 707
Score = 42 (19.8 bits), Expect = 9.7e-40, Sum P(3) = 9.7e-40
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
VL G PG G+ LA + + N + I+ +L T+
Sbjct: 519 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 555
Score = 39 (18.8 bits), Expect = 9.7e-40, Sum P(3) = 9.7e-40
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 456 DGKPPKRLIQDAGDSEN 472
D K P RLI D D+++
Sbjct: 25 DKKRPNRLIIDQSDNDD 41
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 422 (153.6 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 101/275 (36%), Positives = 151/275 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ PV D G + + +V GL D IR ++E + LPL+ PE F +G+ PP+GVLL
Sbjct: 121 VDPVVYNMLHEDPGNI--SYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLL 178
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ + ++ A + KY+G++ R +R +F A + QP
Sbjct: 179 YGPPGTGKTLLARAIASNIDANFLKVVSSA-----IIDKYIGESARLIREMFNYAREHQP 233
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L+ DG G V +I ATNRP+ +DP
Sbjct: 234 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDP 293
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQA 901
AL RPGR DR+I PLP+ + R IL +H K G + + I GF GADL+
Sbjct: 294 ALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKH--GEIDYEAIVKLGEGFNGADLRN 351
Query: 902 LCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+CT+A + A++ R++ + E A K +K++
Sbjct: 352 ICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKL 386
Score = 40 (19.1 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 17/74 (22%), Positives = 29/74 (39%)
Query: 114 NEKSVSPGVWGSRLRSRGRNVGFGAKSDESGHLSRRRKLFREMDEDAESEVGMEKGSEGG 173
+ K + V +R R F D+ L ++ E+ ++E + K S G
Sbjct: 24 HHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGP 83
Query: 174 DLVVSKAEKLDRFK 187
VV K+D+ K
Sbjct: 84 RYVVGCRSKVDKEK 97
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 469 (170.2 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 100/233 (42%), Positives = 144/233 (61%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ + GL ++ ++E++ LPL PE F + G+ PRG+LL+G PGTGKT++ RA+
Sbjct: 352 YDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEV 411
Query: 745 ARGDKRIAYFAR-KGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
AY + G + + K+ G+ E +LR +F A PSIIF DE+D L P R
Sbjct: 412 G------AYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGA 465
Query: 804 QDQTHSSVVSTLLALMDGLKSRGS---VVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
Q + VV++LL LMDG+ S GS V+V+GATNRP+A+D ALRRPGRFD+EI +P+
Sbjct: 466 QSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 525
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
+DR IL R P +T + L +A G+ GADL+ALC +A + AL+R
Sbjct: 526 AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRR 578
Score = 413 (150.4 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 89/233 (38%), Positives = 142/233 (60%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GL+++ +K+ V PL +P+ F+ +G+ PP+GVLL+G PG KT++ +AL
Sbjct: 626 WSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALAN-- 683
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + A KG + + KYVG++ER +R +F+ A PSIIFFDE+D LA R
Sbjct: 684 ---ESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSS 740
Query: 805 DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSME 862
+ + V++ LL MDG++ +V V+ ATNRP+ +D AL RPGR DR IY PLP
Sbjct: 741 GAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAA 800
Query: 863 DRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRN 914
R IL+L P ++ + L + +T ++GA++ A+C +AA++AL+ N
Sbjct: 801 TRREILNLQFHSMP--ISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEEN 851
Score = 37 (18.1 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 919 EILSAAAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
EI++ E A + + + + +R + +ALS P
Sbjct: 835 EIIAVCKEAALLALEENIKADCIMKRHFTQALSIVTP 871
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 465 (168.7 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 111/284 (39%), Positives = 162/284 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ + GL ++ ++E++ LPL PE F + G+ PRGVLL+G PGTGKT++ RA+
Sbjct: 352 YDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEV 411
Query: 745 ARGDKRIAYFAR-KGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
AY + G + + K+ G+ E +LR +F A PSIIF DE+D L P R
Sbjct: 412 G------AYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGA 465
Query: 804 QDQTHSSVVSTLLALMDGLKSR---GSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
Q++ VV++LL LMDG+ S G V+V+GATNRP A+D ALRRPGRFD+EI +P+
Sbjct: 466 QNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPN 525
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+DR IL R P +T + L +A G+ GADL+ LC +A + AL+R Q
Sbjct: 526 AQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPN 585
Query: 921 LSAAAEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKREAGI 964
L K ++TL +D+L+A++ P + RE I
Sbjct: 586 LPDV--KVAGLVKITL-------KDFLQAMN-DIRPSAMREIAI 619
Score = 398 (145.2 bits), Expect = 6.7e-32, Sum P(2) = 6.7e-32
Identities = 90/256 (35%), Positives = 141/256 (55%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GL+ + +++ V PL +PE F +G+ PP+GVLL+G PG KT++ +AL
Sbjct: 626 WSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALAN-- 683
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ- 803
+ + + A KG + + KYVG++ER +R F+ A PSIIFFDE+D LA R
Sbjct: 684 ---ESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSL 740
Query: 804 -QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSME 862
V++ LL MDG++ V ++ ATNRP+ +D AL RPGR DR IY PLP
Sbjct: 741 GAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAA 800
Query: 863 DRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEIL 921
R I L P V+ + L + +T ++GA++ A+C +AA++AL+ + I+
Sbjct: 801 TRREIFKLQFHSMP--VSNEVDLDELILQTDAYSGAEIVAVCREAALLALEEDIQANLIM 858
Query: 922 SAAAEKAFCSKRVTLP 937
+A + +P
Sbjct: 859 KRHFTQALSTVTPRIP 874
Score = 38 (18.4 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 30/129 (23%), Positives = 58/129 (44%)
Query: 71 RRAPVLLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSR 130
+ + VLLDV+ SP M + V L + SA+E NE+ RL
Sbjct: 263 KASDVLLDVTQSPGDGSGLMLEEVT-----GLKCNFESARE-GNEQLTEE----ERLLKF 312
Query: 131 GRNVGFGAKSDESGHLSRRRKL-FREMDEDAESEVGMEKGSEGGDLVVSKAEKLDRFKEL 189
++G +D +S ++ F E+D++++ + K + D++ + +L +E+
Sbjct: 313 --SIGAKCNTDTFYFISSTTRVNFTEIDKNSKEQDNQFKVTY--DMIGGLSSQLKAIREI 368
Query: 190 NDLG-DEPE 197
+L +PE
Sbjct: 369 IELPLKQPE 377
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 467 (169.5 bits), Expect = 2.8e-39, Sum P(2) = 2.8e-39
Identities = 105/268 (39%), Positives = 157/268 (58%)
Query: 647 EDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPL 706
E+EEF G L +A Y+ D + +E + G++ + ++E++ LPL
Sbjct: 492 ENEEF----GCIGEHSQLTLAEEYLKREDYEENNDDITYEDLGGMKKQLNKIRELIELPL 547
Query: 707 LYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYV 766
YPE F ++G++ P+GVL+HG PGTGKT + +A+ A Y G + + K++
Sbjct: 548 KYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAI----ANESNAYCYIIN-GPEIMSKHI 602
Query: 767 GDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRG 826
G++E++LR +F+ A + P IIF DEID +A R++ ++ VVS LL LMDGLK
Sbjct: 603 GESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEKRVVSQLLTLMDGLKKNN 662
Query: 827 SVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKW 886
+V+V+ ATNRP ++DPALRR GRFDREI P+P + R IL T++ +L K
Sbjct: 663 NVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRK- 721
Query: 887 IAARTAGFAGADLQALCTQAAIIALKRN 914
IA G+ GADL LC +AAI +K +
Sbjct: 722 IAKECHGYVGADLAQLCFEAAIQCIKEH 749
Score = 373 (136.4 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 89/282 (31%), Positives = 144/282 (51%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G+ +V +KE ++ PL Y ++ +G+LL+G PG GKTL+ +A+ C
Sbjct: 933 WNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANEC 992
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + KG + L + G++E +R LF A P IIFFDEID LA R
Sbjct: 993 -----KANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNT 1047
Query: 805 DQTHSS-VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ S V++ +L +DG+ + ++ +I ATNRP+ +D AL RPGR D+ IY LP ++
Sbjct: 1048 NNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKS 1107
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R +I + P + +A RT GF+GAD+ LC A A+K L I
Sbjct: 1108 RYSIFKAILKNTPLNEDVDIHD-MAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKK 1166
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKREAGIA 965
E+ ++ SF +++ D + + P SK+ +A
Sbjct: 1167 EQEE---QRKKNKNSFKIDDTDTYDPV----PTLSKKHFDLA 1201
Score = 42 (19.8 bits), Expect = 2.8e-39, Sum P(2) = 2.8e-39
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
+L+ G PG G+ LA + + N + ++ +L T+
Sbjct: 971 ILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTM 1007
Score = 38 (18.4 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 372 QIGGEHNEGEDHPDGGEHVRISTSE--VKDGSSDHQKDD 408
+I E +E E+ GEH +++ +E +K + DD
Sbjct: 485 KIISEESENEEFGCIGEHSQLTLAEEYLKREDYEENNDD 523
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 467 (169.5 bits), Expect = 2.8e-39, Sum P(2) = 2.8e-39
Identities = 105/268 (39%), Positives = 157/268 (58%)
Query: 647 EDEEFLKREGKRLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPL 706
E+EEF G L +A Y+ D + +E + G++ + ++E++ LPL
Sbjct: 492 ENEEF----GCIGEHSQLTLAEEYLKREDYEENNDDITYEDLGGMKKQLNKIRELIELPL 547
Query: 707 LYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYV 766
YPE F ++G++ P+GVL+HG PGTGKT + +A+ A Y G + + K++
Sbjct: 548 KYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAI----ANESNAYCYIIN-GPEIMSKHI 602
Query: 767 GDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRG 826
G++E++LR +F+ A + P IIF DEID +A R++ ++ VVS LL LMDGLK
Sbjct: 603 GESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEKRVVSQLLTLMDGLKKNN 662
Query: 827 SVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKW 886
+V+V+ ATNRP ++DPALRR GRFDREI P+P + R IL T++ +L K
Sbjct: 663 NVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRK- 721
Query: 887 IAARTAGFAGADLQALCTQAAIIALKRN 914
IA G+ GADL LC +AAI +K +
Sbjct: 722 IAKECHGYVGADLAQLCFEAAIQCIKEH 749
Score = 373 (136.4 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 89/282 (31%), Positives = 144/282 (51%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G+ +V +KE ++ PL Y ++ +G+LL+G PG GKTL+ +A+ C
Sbjct: 933 WNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANEC 992
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + KG + L + G++E +R LF A P IIFFDEID LA R
Sbjct: 993 -----KANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNT 1047
Query: 805 DQTHSS-VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ S V++ +L +DG+ + ++ +I ATNRP+ +D AL RPGR D+ IY LP ++
Sbjct: 1048 NNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKS 1107
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R +I + P + +A RT GF+GAD+ LC A A+K L I
Sbjct: 1108 RYSIFKAILKNTPLNEDVDIHD-MAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKK 1166
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKREAGIA 965
E+ ++ SF +++ D + + P SK+ +A
Sbjct: 1167 EQEE---QRKKNKNSFKIDDTDTYDPV----PTLSKKHFDLA 1201
Score = 42 (19.8 bits), Expect = 2.8e-39, Sum P(2) = 2.8e-39
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
+L+ G PG G+ LA + + N + ++ +L T+
Sbjct: 971 ILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTM 1007
Score = 38 (18.4 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 372 QIGGEHNEGEDHPDGGEHVRISTSE--VKDGSSDHQKDD 408
+I E +E E+ GEH +++ +E +K + DD
Sbjct: 485 KIISEESENEEFGCIGEHSQLTLAEEYLKREDYEENNDD 523
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 430 (156.4 bits), Expect = 3.0e-39, P = 3.0e-39
Identities = 105/281 (37%), Positives = 154/281 (54%)
Query: 661 RDLLR-IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTP 719
R L R + P+ S D G + + V GL + IR ++EVV LPL+ PE F +G+TP
Sbjct: 126 RQLPREVDPLVYKMSHEDPGNI--SYSDVGGLAEQIRELREVVELPLINPELFKRVGITP 183
Query: 720 PRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQV 779
P+G LL G PGTGKTL+ RA+ ++ A + KY+G++ R +R +F
Sbjct: 184 PKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSA-----IVDKYIGESARMIREMFNY 238
Query: 780 AEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNR 836
A QP I+F DEID + R + + TL+ L+ DG S G V VI ATNR
Sbjct: 239 ARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNR 298
Query: 837 PEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFA 895
P+ +DPAL RPGR DR+I LP+ + R IL +H+ + K G + + + + GF+
Sbjct: 299 PDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKH--GEIDFEAVVKLSDGFS 356
Query: 896 GADLQALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
ADL+ +CT+A + A++ R F + E A K +KR+
Sbjct: 357 AADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRL 397
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 430 (156.4 bits), Expect = 3.0e-39, P = 3.0e-39
Identities = 105/281 (37%), Positives = 154/281 (54%)
Query: 661 RDLLR-IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTP 719
R L R + P+ S D G + + V GL + IR ++EVV LPL+ PE F +G+TP
Sbjct: 126 RQLPREVDPLVYKMSHEDPGNI--SYSDVGGLAEQIRELREVVELPLINPELFKRVGITP 183
Query: 720 PRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQV 779
P+G LL G PGTGKTL+ RA+ ++ A + KY+G++ R +R +F
Sbjct: 184 PKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSA-----IVDKYIGESARMIREMFNY 238
Query: 780 AEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNR 836
A QP I+F DEID + R + + TL+ L+ DG S G V VI ATNR
Sbjct: 239 ARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNR 298
Query: 837 PEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFA 895
P+ +DPAL RPGR DR+I LP+ + R IL +H+ + K G + + + + GF+
Sbjct: 299 PDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKH--GEIDFEAVVKLSDGFS 356
Query: 896 GADLQALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
ADL+ +CT+A + A++ R F + E A K +KR+
Sbjct: 357 AADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRL 397
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 417 (151.9 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 93/255 (36%), Positives = 147/255 (57%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL+ I+ +KE V LPL +PE ++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 183 ESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 242
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ RI G++ + KY+GD R R +FQ+A PSI+F DEID + R
Sbjct: 243 QTSATFLRIV-----GSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYE 297
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG RG + VI ATN+ E++DPAL RPGR DR+I F P
Sbjct: 298 STSGGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENP 357
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK-RNFPLQ 918
+ IL++HT + +L + + + +GAD++A+CT+A ++AL+ R ++
Sbjct: 358 DANTKKKILTIHTSKMSLADDVNLDEIVTGKD-DLSGADIKAICTEAGLLALRERRMQVK 416
Query: 919 -EILSAAAEKAFCSK 932
E +A E+ +K
Sbjct: 417 AEDFKSAKERVLKNK 431
Score = 40 (19.1 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 21/101 (20%), Positives = 38/101 (37%)
Query: 415 EKPVECENAPKVDAFNPGSDSTLGWPRIKQGRRCGLCGCGNDGKPPKRLIQDAGDSENEV 474
E PVE + K G D+ + P + RC L + L+++ + E
Sbjct: 29 EPPVESKFGKKK---RRGPDTAVKLPSVYPNTRCKLKLLKLERIKDHLLLEEEFVTNQEA 85
Query: 475 YSGSSASEEPNYDIWDGFGDEPGWLGRLLGPINDRYGIAGT 515
+ + A + + D P +G L I+D + I +
Sbjct: 86 FQPTEARQAEEREKVDELRGYPMAIGTLEEIIDDDHAIVSS 126
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 427 (155.4 bits), Expect = 6.2e-39, P = 6.2e-39
Identities = 103/275 (37%), Positives = 153/275 (55%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + + ++ GL D IR ++EV+ LPLL PE F +G+TPP+G LL
Sbjct: 123 VDPLVYNMSHEDPGDVT--YSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLL 180
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ A + KY+G++ R +R +F A QP
Sbjct: 181 YGPPGTGKTLLARAVASQLDANFLKVVSSA-----IVDKYIGESARLIREMFNYARDHQP 235
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG S G V +I ATNRP+++DP
Sbjct: 236 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDP 295
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQA 901
AL RPGR DR+I PLP+ + R IL +H + K G + + I + F GADL+
Sbjct: 296 ALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKH--GEIDYEAIVKLSDNFNGADLRN 353
Query: 902 LCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+CT+A + A++ R + +Q A K +K++
Sbjct: 354 VCTEAGLFAIRAEREYVIQGDFMKAVRKVSDNKKL 388
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 427 (155.4 bits), Expect = 6.2e-39, P = 6.2e-39
Identities = 105/250 (42%), Positives = 151/250 (60%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E V GL+ I+ +KEV+ LP+ +PE F++LG+ P+G+LL+G PGTGKTL+ RA+
Sbjct: 144 YEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAV---A 200
Query: 745 ARGDKRIAYFAR-KGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
D + F R G++ + KY+G+ R +R LF +A + PSIIF DEID + R+
Sbjct: 201 HHTDCK---FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDS 257
Query: 804 QDQTHSSVVS-TLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ S V T+L L+ DG ++ ++ VI ATNR + +DPAL RPGR DR+I FP P
Sbjct: 258 SGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPP 317
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPL 917
S E RA IL +H+ R G LK IA + G +GA+L+ +CT+A + AL+ R
Sbjct: 318 SAEARAEILRIHS-RSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVT 376
Query: 918 QEILSAAAEK 927
QE A K
Sbjct: 377 QEDFELAVAK 386
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 416 (151.5 bits), Expect = 7.2e-39, Sum P(2) = 7.2e-39
Identities = 93/236 (39%), Positives = 144/236 (61%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E F+ + G + I+ +KE V LPL +PE+++ +G+T P+GV+L+G PGTGKTL+ +A+
Sbjct: 180 ETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVAN 239
Query: 743 SCARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRT 801
S + A F R G+D + K G+ R +R +FQ+A++ PSI+F DEID + R
Sbjct: 240 STS------ATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRF 293
Query: 802 RQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPL 858
+ V TLL L+ DG +SRG V +I ATNR +++DPAL RPGR DR+I P
Sbjct: 294 DTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPK 353
Query: 859 PSMEDRAAILSLHTERWP--KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
P + R I ++HT K VT + + + +GA+++A+CT+A ++AL+
Sbjct: 354 PDEKTRQKIFTIHTSGMTIQKAVT---YENVLGKEKSISGAEIKAVCTEAGMLALR 406
Score = 38 (18.4 bits), Expect = 7.2e-39, Sum P(2) = 7.2e-39
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 458 KPPKRLIQDAGDSENEVYSGSSASEEP 484
K PK D G E+++ + E P
Sbjct: 176 KTPKETFDDIGGCESQIQELKESVELP 202
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 426 (155.0 bits), Expect = 8.0e-39, P = 8.0e-39
Identities = 101/270 (37%), Positives = 154/270 (57%)
Query: 671 IGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPG 730
I S++ + K+ + + GL + IR M+EVV LP+L P + +G+ P+GVLL+G PG
Sbjct: 124 IDKSENSTNKV--NYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPG 181
Query: 731 TGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFF 790
TGKTL+ RA+ + RI A + KY+G++ R +R +F A++ QP IIF
Sbjct: 182 TGKTLLARAMASNINCNFMRIVVSA-----IVDKYIGESARIIREMFNYAKEHQPCIIFM 236
Query: 791 DEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRP 847
DEID + R Q + TL+ L+ DG + G+V +I ATNRP+ +DPAL RP
Sbjct: 237 DEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRP 296
Query: 848 GRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQA 906
GR DR+I PLP+ R IL +H + K G + + + GF GADL+ +CT+A
Sbjct: 297 GRLDRKIEIPLPNETARIEILKIHANKMTK--LGDIDYESVCRLCDGFNGADLRNVCTEA 354
Query: 907 AIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ A++ R++ ++E AA K K++
Sbjct: 355 GMFAIRAMRDYVIEEDFYKAARKISEGKKL 384
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 426 (155.0 bits), Expect = 8.0e-39, P = 8.0e-39
Identities = 101/270 (37%), Positives = 154/270 (57%)
Query: 671 IGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPG 730
I S++ + K+ + + GL + IR M+EVV LP+L P + +G+ P+GVLL+G PG
Sbjct: 124 IDKSENSTNKV--NYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPG 181
Query: 731 TGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFF 790
TGKTL+ RA+ + RI A + KY+G++ R +R +F A++ QP IIF
Sbjct: 182 TGKTLLARAMASNINCNFMRIVVSA-----IVDKYIGESARIIREMFNYAKEHQPCIIFM 236
Query: 791 DEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRP 847
DEID + R Q + TL+ L+ DG + G+V +I ATNRP+ +DPAL RP
Sbjct: 237 DEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRP 296
Query: 848 GRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQA 906
GR DR+I PLP+ R IL +H + K G + + + GF GADL+ +CT+A
Sbjct: 297 GRLDRKIEIPLPNETARIEILKIHANKMTK--LGDIDYESVCRLCDGFNGADLRNVCTEA 354
Query: 907 AIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ A++ R++ ++E AA K K++
Sbjct: 355 GMFAIRAMRDYVIEEDFYKAARKISEGKKL 384
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 425 (154.7 bits), Expect = 1.0e-38, P = 1.0e-38
Identities = 103/262 (39%), Positives = 152/262 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ V GL I+ +KEV+ LP+ +PE F++LG+ P+GV+L+G PGTGKTL+ RA+
Sbjct: 147 YDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAV---A 203
Query: 745 ARGDKRIAYFAR-KGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
D + F R GA+ + KY+G+ R +R LF +A + PSIIF DEID + R
Sbjct: 204 HHTDCK---FIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEG 260
Query: 804 QDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
S V T+L L+ DG ++ ++ +I ATNR + +DPAL RPGR DR+I FP PS
Sbjct: 261 SGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPS 320
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQ 918
+ RA IL +H+ + G L+ +A + G +GAD++ +CT+A + AL+ R Q
Sbjct: 321 VAARAEILRIHSRKM-NLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQ 379
Query: 919 EILSAAAEKAFCSKRVTLPSFA 940
E A K + T S A
Sbjct: 380 EDFELAVGKVMNKNQETAISVA 401
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 422 (153.6 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 97/256 (37%), Positives = 149/256 (58%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL+ I+ ++E V LPLL+PE ++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 201 ESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 260
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ RI G++ + KY+GD R +R +FQVA + PSI+F DEID + R
Sbjct: 261 QTSATFLRIV-----GSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRYD 315
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG RG V VI ATN+ E +DPAL RPGR DR+I F P
Sbjct: 316 STSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENP 375
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK-RNFPLQ 918
+ I +LHT + L ++I + +GAD++A+CT+A ++AL+ R +Q
Sbjct: 376 DQNTKKKIFTLHTSKMSLGDDVDLDEFINQKD-DLSGADIRAICTEAGLMALRERRMRVQ 434
Query: 919 -EILSAAAEKAFCSKR 933
+ AA E+ +K+
Sbjct: 435 MDDFRAARERIMKTKQ 450
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 421 (153.3 bits), Expect = 2.7e-38, P = 2.7e-38
Identities = 96/234 (41%), Positives = 143/234 (61%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ V G ++ I ++EVV +PLL+PE F NLG+ PP+GVL++G PGTGKTL RA+
Sbjct: 169 YKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVAN-- 226
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LFQ+A + IIFFDE+D + R
Sbjct: 227 -RTD---AAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDD 282
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR++ F LP
Sbjct: 283 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 342
Query: 861 MEDRAAILSLH--TERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+E RA I ++H T + + LL + + G AD++++CT+A + A++
Sbjct: 343 LEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTG---ADIRSVCTEAGMFAIR 393
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 421 (153.3 bits), Expect = 2.7e-38, P = 2.7e-38
Identities = 104/275 (37%), Positives = 153/275 (55%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + F V GL + IR ++EV+ LPL PE F +G+ PP+GVLL
Sbjct: 114 VDPLVYNMSIEDPGDI--SFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLL 171
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ S ++ A + KY+G++ R +R +F A++ +P
Sbjct: 172 YGPPGTGKTLLARAVAASLGVNFLKVVSSA-----IVDKYIGESARIIREMFGYAKEHEP 226
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
+IF DEID + R + + TL+ L MDG G +I ATNRP+ +DP
Sbjct: 227 CVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDP 286
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQA 901
AL RPGR DR+I PLP+ R IL +H E+ K G + + + T G GADL+
Sbjct: 287 ALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQ--GEIDYEALVKLTDGTNGADLRN 344
Query: 902 LCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ T+A IA+K R++ +Q L +AA K K++
Sbjct: 345 VVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKL 379
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 406 (148.0 bits), Expect = 3.2e-38, Sum P(2) = 3.2e-38
Identities = 91/231 (39%), Positives = 138/231 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E V GL I+ +KEV+ LP+ +PE FD LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 233
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 234 -----ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGS 288
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +D AL RPGR DR+I FP P
Sbjct: 289 RGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDE 348
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ RA IL +H+ + + G + IA + G +GA+++++CT+A + AL+
Sbjct: 349 KARAQILKIHSRKM-NLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALR 398
Score = 42 (19.8 bits), Expect = 3.2e-38, Sum P(2) = 3.2e-38
Identities = 19/69 (27%), Positives = 29/69 (42%)
Query: 72 RAPVLLDVSPSPVKKR----RKMDKTVNLYVSKSLNSSRRSAKEKD-NEKSVSPGVWGSR 126
R P LD + R K+++ KS+N R A++K+ N K S
Sbjct: 32 RKPATLDANSDEQTLRPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISH 91
Query: 127 LRSRGRNVG 135
L +G +VG
Sbjct: 92 LHEQGSHVG 100
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 442 (160.7 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 95/234 (40%), Positives = 140/234 (59%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
+ GL + I+ ++E++I P+L+P+ F L + PP+G+LL G PGTGKT +VR + C
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTV---CDAY 345
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQ------VAEKCQPSIIFFDEIDGLAPCRT 801
D I + A G Y+G+ E LR +FQ +A+ P ++F DEID + P R+
Sbjct: 346 D--IEMISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRS 403
Query: 802 RQQDQTHSSVVSTLLALMDGLKSR-GSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ Q S VV L L+DG+ +R G++++I ATNRP +D ALRRPGR DREI P+P+
Sbjct: 404 KST-QNESRVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPN 462
Query: 861 MEDRAAILSLHTERWP-KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ R IL L+ + P P +LL IA T G+ GA++Q LC +A IA +
Sbjct: 463 KQQRLDILKLYCSKLPISPTPSNLLDQIADETVGYVGANIQFLCRDSAFIAFSK 516
Score = 412 (150.1 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 88/234 (37%), Positives = 140/234 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ + GL D+ +++ + P LY E F+ GL+PP+G++L+G PG KT +V+A+ S
Sbjct: 569 WDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASS- 627
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++++ + GA Y+GD+E+ +R +F+ A + PSI+FFDEID + R
Sbjct: 628 ----SKLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSD 683
Query: 805 ----DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
D S V+ST L MDG++ V+VIGATNR + +D AL RPGRFD+ + LP
Sbjct: 684 NSSGDNAQSRVLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKLPD 743
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRN 914
R IL + T+ P +L++ I+ T GF+GADL+ LC +A+ +L+R+
Sbjct: 744 QLSRLKILKIKTKSIPLSDNVNLIE-ISNLTNGFSGADLENLCREASFQSLRRD 796
Score = 48 (22.0 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 45 PNEDDDEAAETGSAARNLELRRSSRVRRAPVL------LDVSPSPVKKRRKM-DKTVNLY 97
PN+ D+ G R +E+ ++ +R +L L +SP+P ++ D+TV Y
Sbjct: 439 PNQIDNALRRPGRLDREIEIPVPNKQQRLDILKLYCSKLPISPTPSNLLDQIADETVG-Y 497
Query: 98 VSKSL 102
V ++
Sbjct: 498 VGANI 502
>UNIPROTKB|H7C475 [details] [associations]
symbol:ATAD2B "ATPase family AAA domain-containing protein
2B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC009242 EMBL:AC066692 EMBL:AC079924 HGNC:HGNC:29230
ProteinModelPortal:H7C475 Ensembl:ENST00000366438 Uniprot:H7C475
Length = 155
Score = 419 (152.6 bits), Expect = 4.5e-38, P = 4.5e-38
Identities = 77/125 (61%), Positives = 96/125 (76%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+S+ GL I +KE+V+ PLLYPE F+ + PPRG L +G PGTGKTLV RAL C
Sbjct: 21 FDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANEC 80
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++GDK++A+F RKGADCL K+VG++ERQLRLLF A +PSIIFFDEIDGLAP R+ +Q
Sbjct: 81 SQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQ 140
Query: 805 DQTHS 809
DQ HS
Sbjct: 141 DQIHS 145
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 418 (152.2 bits), Expect = 5.7e-38, P = 5.7e-38
Identities = 103/249 (41%), Positives = 146/249 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ + GL I+ +KEV+ L L +PE F++LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 131 YDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV---A 187
Query: 745 ARGDKRIAYFAR-KGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
D R F R G++ + KY+G+ R +R LF +A + PSIIF DEID + R
Sbjct: 188 HHTDCR---FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDS 244
Query: 804 QDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
S V T+L L+ DG + ++ +I ATNR + +DPAL RPGR DR+I FP PS
Sbjct: 245 AGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPS 304
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQ 918
+E RA IL +H+ R G L IA + G +GA+L+ +CT+A + AL+ R Q
Sbjct: 305 VEARADILRIHS-RSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQ 363
Query: 919 EILSAAAEK 927
E A K
Sbjct: 364 EDFDLATAK 372
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 417 (151.9 bits), Expect = 7.3e-38, P = 7.3e-38
Identities = 98/248 (39%), Positives = 145/248 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ V GL I+ +KEV+ LP+ +PE F++LG+ P+GV+L+G PGTGKTL+ RA+
Sbjct: 143 YDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHT 202
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
R++ G++ + KY+G+ R +R LF +A + PSIIF DEID + R
Sbjct: 203 ECKFIRVS-----GSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGS 257
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG +S + +I ATNR + +DPAL RPGR DR+I FP P++
Sbjct: 258 SGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTV 317
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
R IL +H+ R G L+ IA + G +GAD++ +CT+A + AL+ R QE
Sbjct: 318 AARTDILKIHS-RSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQE 376
Query: 920 ILSAAAEK 927
A K
Sbjct: 377 DFELAVAK 384
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 417 (151.9 bits), Expect = 7.3e-38, P = 7.3e-38
Identities = 90/233 (38%), Positives = 136/233 (58%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL+ I+ +KE V LPL +PE ++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 179 ESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 238
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ RI G++ + KY+GD R R +F+VA + PSI+F DEID + R
Sbjct: 239 QTSATFLRIV-----GSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYD 293
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ T+L L+ DG RG V VI ATN+ E +DPAL RPGR DR+I F P
Sbjct: 294 SNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENP 353
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ + IL +HT + +L + + +GAD+QA+CT+A ++AL+
Sbjct: 354 DLSTKKKILGIHTSKMNLSEDVNLETLVTTKD-DLSGADIQAMCTEAGLLALR 405
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 416 (151.5 bits), Expect = 9.4e-38, P = 9.4e-38
Identities = 97/266 (36%), Positives = 153/266 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV R ++E+V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 208 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 267
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 268 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 322
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 323 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 382
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+ R AIL + + PV + L ++A T GF+GADL +C +A +A++ + EI
Sbjct: 383 KSRVAILKANLRK--SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE-SEI 439
Query: 921 LSAAAEKAFCSKRVTLPS-FAVEERD 945
E+ +R T PS VEE D
Sbjct: 440 ---RRER----ERQTNPSAMEVEEDD 458
Score = 348 (127.6 bits), Expect = 7.8e-29, Sum P(2) = 7.8e-29
Identities = 82/198 (41%), Positives = 113/198 (57%)
Query: 758 GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLA 817
G + + K G++E LR F+ AEK P+IIF DE+D +AP R + + +VS LL
Sbjct: 3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLT 62
Query: 818 LMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPK 877
LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P R IL +HT+ K
Sbjct: 63 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM-K 121
Query: 878 PVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLP 937
L+ + T G GADL ALC++AA+ A+++ L ++ E V +
Sbjct: 122 LADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDL-----EDETIDAEV-MN 175
Query: 938 SFAVEERDWLEALSCSPP 955
S AV D+ ALS S P
Sbjct: 176 SLAVTMDDFRWALSQSNP 193
Score = 46 (21.3 bits), Expect = 7.8e-29, Sum P(2) = 7.8e-29
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 241 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 282
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 405 (147.6 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
Identities = 94/234 (40%), Positives = 138/234 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV LPLL PE F LG+ PP+G+LL+G PGTGKTL RA+
Sbjct: 185 YSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVAN-- 242
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + IIFFDE+D + R
Sbjct: 243 -RTD---ATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDD 298
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP +DPAL RPGR DR++ F LP
Sbjct: 299 GAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPD 358
Query: 861 MEDRAAILSLHTERWP--KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+E RA I +H++ K + L+ + G A+L+++CT+A + A++
Sbjct: 359 LEGRANIFRIHSKTMSVEKDIRWELISRLCPNATG---AELRSVCTEAGMFAIR 409
Score = 38 (18.4 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 249 GEDSKMIPESVLGVENVTEVVEA 271
G+ +M E L V T+++EA
Sbjct: 82 GDKQRMQEEQSLQVARCTKIIEA 104
Score = 38 (18.4 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 216 GMKEESGRGEELEVVRNEREDSKTIPESVVGNEGEDSKMIPESVLGVENVTEVV 269
G K+ + L+V R + + P+ G + D+K + V+ ++ + + V
Sbjct: 82 GDKQRMQEEQSLQVARCTKIIEASQPQQPTGLQNADTKS--KYVINIKQIAKFV 133
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 415 (151.1 bits), Expect = 1.2e-37, P = 1.2e-37
Identities = 103/281 (36%), Positives = 153/281 (54%)
Query: 661 RDLLR-IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTP 719
R L R + PV D G + + +V GL D IR ++E + LPL+ PE F +G+ P
Sbjct: 116 RTLPREVDPVVYNMLHEDPGNV--SYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 173
Query: 720 PRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQV 779
P+GVLL+G PGTGKTL+ RA+ + +I A + KY+G++ R +R +F
Sbjct: 174 PKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSA-----IIDKYIGESARLIREMFGY 228
Query: 780 AEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNR 836
A QP IIF DEID + R + + TL+ L+ DG G V +I ATNR
Sbjct: 229 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNR 288
Query: 837 PEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFA 895
P+ +DPAL RPGR DR+I PLP+ + R +L +H K G + + + GF
Sbjct: 289 PDVLDPALLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIAKH--GEIDYEAVVKLAEGFN 346
Query: 896 GADLQALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
GADL+ +CT+A + A++ R++ + E A K +K++
Sbjct: 347 GADLRNVCTEAGMAAIRAERDYVVHEDFMKAVRKLNDAKKL 387
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 414 (150.8 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 100/275 (36%), Positives = 150/275 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ + D G + + + GL IR ++EV+ LPLL P+ F +G++PP+G LL
Sbjct: 124 VDPLVYNMTHEDPGNV--NYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLL 181
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ A + KY+G++ R +R +F A QP
Sbjct: 182 YGPPGTGKTLLARAIASQMDANFLKVVSSA-----IVDKYIGESARLIREMFAYARDHQP 236
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG + G V +I ATNRP+ +DP
Sbjct: 237 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDP 296
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQA 901
AL RPGR DR++ PLP+ R IL +H E P G + + + + F GADL+
Sbjct: 297 ALLRPGRLDRKLEIPLPNEVARMDILKIHAE--PLNKRGEIDYEAVVKLSDLFNGADLRN 354
Query: 902 LCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+CT+A + AL+ R F +QE A K +K++
Sbjct: 355 ICTEAGLFALRCDREFVIQEDFMKAVRKIADNKKL 389
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 414 (150.8 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 98/249 (39%), Positives = 145/249 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ + GL I+ +KEV+ LP+ +PE F++LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV---A 216
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ- 803
D + G++ + KY+G+ R +R LF +A + PSIIF DEID + R
Sbjct: 217 HHTD--CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
Query: 804 QDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
S V T+L L+ DG ++ + V+ ATNR + +D AL RPGR DR+I FP P+
Sbjct: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQ 918
E R IL +H+ + + G LK IA + G +GA+L+A+CT+A + AL+ R Q
Sbjct: 335 EESRFDILKIHSRKM-NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQ 393
Query: 919 EILSAAAEK 927
E A K
Sbjct: 394 EDFEMAVAK 402
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 414 (150.8 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 98/249 (39%), Positives = 145/249 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ + GL I+ +KEV+ LP+ +PE F++LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV---A 216
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ- 803
D + G++ + KY+G+ R +R LF +A + PSIIF DEID + R
Sbjct: 217 HHTD--CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
Query: 804 QDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
S V T+L L+ DG ++ + V+ ATNR + +D AL RPGR DR+I FP P+
Sbjct: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQ 918
E R IL +H+ + + G LK IA + G +GA+L+A+CT+A + AL+ R Q
Sbjct: 335 EESRFDILKIHSRKM-NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQ 393
Query: 919 EILSAAAEK 927
E A K
Sbjct: 394 EDFEMAVAK 402
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 413 (150.4 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 100/277 (36%), Positives = 151/277 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + + + GL + IR ++EV+ LPL PE F +G+ PP+G LL
Sbjct: 115 VDPLVYNMSHEDPGNV--SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ + + KY+G++ R +R +F A QP
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVV-----SSSIVDKYIGESARLIREMFNYARDHQP 227
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG + V +I ATNRP+ +DP
Sbjct: 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVT--GSL-LKWIAARTAGFAGADL 899
AL RPGR DR+I+ LP+ + R IL +H P+T G + + I + GF GADL
Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADL 343
Query: 900 QALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ +CT+A + A++ +F +QE A K SK++
Sbjct: 344 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 413 (150.4 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 100/277 (36%), Positives = 151/277 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + + + GL + IR ++EV+ LPL PE F +G+ PP+G LL
Sbjct: 121 VDPLVYNMSHEDPGNV--SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 178
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ + + KY+G++ R +R +F A QP
Sbjct: 179 YGPPGTGKTLLARAVASQLDCNFLKVV-----SSSIVDKYIGESARLIREMFNYARDHQP 233
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG + V +I ATNRP+ +DP
Sbjct: 234 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 293
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVT--GSL-LKWIAARTAGFAGADL 899
AL RPGR DR+I+ LP+ + R IL +H P+T G + + I + GF GADL
Sbjct: 294 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADL 349
Query: 900 QALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ +CT+A + A++ +F +QE A K SK++
Sbjct: 350 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 386
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 413 (150.4 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 100/277 (36%), Positives = 151/277 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + + + GL + IR ++EV+ LPL PE F +G+ PP+G LL
Sbjct: 115 VDPLVYNMSHEDPGNV--SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ + + KY+G++ R +R +F A QP
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVV-----SSSIVDKYIGESARLIREMFNYARDHQP 227
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG + V +I ATNRP+ +DP
Sbjct: 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVT--GSL-LKWIAARTAGFAGADL 899
AL RPGR DR+I+ LP+ + R IL +H P+T G + + I + GF GADL
Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADL 343
Query: 900 QALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ +CT+A + A++ +F +QE A K SK++
Sbjct: 344 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 413 (150.4 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 100/277 (36%), Positives = 151/277 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + + + GL + IR ++EV+ LPL PE F +G+ PP+G LL
Sbjct: 129 VDPLVYNMSHEDPGNV--SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 186
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ + + KY+G++ R +R +F A QP
Sbjct: 187 YGPPGTGKTLLARAVASQLDCNFLKVV-----SSSIVDKYIGESARLIREMFNYARDHQP 241
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG + V +I ATNRP+ +DP
Sbjct: 242 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 301
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVT--GSL-LKWIAARTAGFAGADL 899
AL RPGR DR+I+ LP+ + R IL +H P+T G + + I + GF GADL
Sbjct: 302 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADL 357
Query: 900 QALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ +CT+A + A++ +F +QE A K SK++
Sbjct: 358 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 394
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 413 (150.4 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 100/277 (36%), Positives = 151/277 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + + + GL + IR ++EV+ LPL PE F +G+ PP+G LL
Sbjct: 115 VDPLVYNMSHEDPGNV--SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ + + KY+G++ R +R +F A QP
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVV-----SSSIVDKYIGESARLIREMFNYARDHQP 227
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG + V +I ATNRP+ +DP
Sbjct: 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVT--GSL-LKWIAARTAGFAGADL 899
AL RPGR DR+I+ LP+ + R IL +H P+T G + + I + GF GADL
Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADL 343
Query: 900 QALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ +CT+A + A++ +F +QE A K SK++
Sbjct: 344 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 413 (150.4 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 100/277 (36%), Positives = 151/277 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + + + GL + IR ++EV+ LPL PE F +G+ PP+G LL
Sbjct: 115 VDPLVYNMSHEDPGNV--SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ + + KY+G++ R +R +F A QP
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVV-----SSSIVDKYIGESARLIREMFNYARDHQP 227
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG + V +I ATNRP+ +DP
Sbjct: 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVT--GSL-LKWIAARTAGFAGADL 899
AL RPGR DR+I+ LP+ + R IL +H P+T G + + I + GF GADL
Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADL 343
Query: 900 QALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ +CT+A + A++ +F +QE A K SK++
Sbjct: 344 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 413 (150.4 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 100/277 (36%), Positives = 151/277 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + + + GL + IR ++EV+ LPL PE F +G+ PP+G LL
Sbjct: 107 VDPLVYNMSHEDPGNV--SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 164
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ + + KY+G++ R +R +F A QP
Sbjct: 165 YGPPGTGKTLLARAVASQLDCNFLKVV-----SSSIVDKYIGESARLIREMFNYARDHQP 219
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG + V +I ATNRP+ +DP
Sbjct: 220 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 279
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVT--GSL-LKWIAARTAGFAGADL 899
AL RPGR DR+I+ LP+ + R IL +H P+T G + + I + GF GADL
Sbjct: 280 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADL 335
Query: 900 QALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ +CT+A + A++ +F +QE A K SK++
Sbjct: 336 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 372
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 413 (150.4 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 100/277 (36%), Positives = 151/277 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + + + GL + IR ++EV+ LPL PE F +G+ PP+G LL
Sbjct: 129 VDPLVYNMSHEDPGNV--SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 186
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ + + KY+G++ R +R +F A QP
Sbjct: 187 YGPPGTGKTLLARAVASQLDCNFLKVV-----SSSIVDKYIGESARLIREMFNYARDHQP 241
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG + V +I ATNRP+ +DP
Sbjct: 242 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 301
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVT--GSL-LKWIAARTAGFAGADL 899
AL RPGR DR+I+ LP+ + R IL +H P+T G + + I + GF GADL
Sbjct: 302 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADL 357
Query: 900 QALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ +CT+A + A++ +F +QE A K SK++
Sbjct: 358 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 394
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 413 (150.4 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 93/234 (39%), Positives = 140/234 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I M+EVV LP+L+PE F LG+ PP+GVL +G PGTGKTL+ RA+
Sbjct: 167 YNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN-- 224
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LFQ+A + I+FFDE+D + R
Sbjct: 225 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L + +DG +RG++ V+ ATNRP+ +DPAL RPGR DR++ F LP
Sbjct: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
Query: 861 MEDRAAILSLHTERW--PKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+E R I +HT + + LL + + G AD++++CT+A + A++
Sbjct: 341 LESRTQIFKIHTRTMNCERDIRFELLARLCPNSTG---ADIRSVCTEAGMYAIR 391
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 400 (145.9 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 90/236 (38%), Positives = 134/236 (56%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I + E ++LP+L+ E F+ +G+ PP+GVL+HG PGTGKTL+ RA
Sbjct: 183 EDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARA--- 239
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA + G + ++GD + +R F +A++ P+IIF DE+D + R
Sbjct: 240 -CA-SQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFD 297
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + +V VI ATNRP+ +DPAL R GR DR+I P P
Sbjct: 298 SELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHP 357
Query: 860 SMEDRAAILSLHTERWP--KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA IL +H+ + K V + +A T F GA L+A+C +A +IAL+R
Sbjct: 358 NEESRARILQIHSRKMNVHKDVN---FEELARSTDDFNGAQLKAVCVEAGMIALRR 410
Score = 40 (19.1 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 392 ISTSEVKDGSS-DHQKDDFLAMLEEKPVECENAPK 425
I SE+K G KD +L ++++ P E +N K
Sbjct: 140 IDASELKPGDLVGVNKDSYL-IIDKLPQEYDNRVK 173
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 400 (145.9 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 90/236 (38%), Positives = 134/236 (56%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I + E ++LP+L+ E F+ +G+ PP+GVL+HG PGTGKTL+ RA
Sbjct: 183 EDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARA--- 239
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA + G + ++GD + +R F +A++ P+IIF DE+D + R
Sbjct: 240 -CA-SQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFD 297
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + +V VI ATNRP+ +DPAL R GR DR+I P P
Sbjct: 298 SELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHP 357
Query: 860 SMEDRAAILSLHTERWP--KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA IL +H+ + K V + +A T F GA L+A+C +A +IAL+R
Sbjct: 358 NEESRARILQIHSRKMNVHKDVN---FEELARSTDDFNGAQLKAVCVEAGMIALRR 410
Score = 40 (19.1 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 392 ISTSEVKDGSS-DHQKDDFLAMLEEKPVECENAPK 425
I SE+K G KD +L ++++ P E +N K
Sbjct: 140 IDASELKPGDLVGVNKDSYL-IIDKLPQEYDNRVK 173
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 391 (142.7 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 90/236 (38%), Positives = 134/236 (56%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL+ I+ + E ++LP+ + E F+ LG+ PP+GVLL+G PGTGKTL+ RA
Sbjct: 168 EDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARA--- 224
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA + G + ++GD + +R FQ+A++ P IIF DEID + R
Sbjct: 225 -CA-AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFD 282
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG S + VI ATNR + +DPAL R GR DR+I FP P
Sbjct: 283 SEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHP 342
Query: 860 SMEDRAAILSLHTERWP-KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRN 914
+ E RA IL +H+ + P + +A T F GA L+A+C +A ++AL+R+
Sbjct: 343 TEEARARILQIHSRKMNVHPDVN--FEELARSTDDFNGAQLKAVCVEAGMLALRRD 396
Score = 49 (22.3 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 617 RKMKMEIRKLSNDAWRKDMEAEEKWLENCGEDEEFLK 653
R + EIR L DA R ++E + + E E++E +K
Sbjct: 30 RLLDNEIRILKEDAQRTNLECDS-YKEKIKENQEKIK 65
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 412 (150.1 bits), Expect = 2.5e-37, P = 2.5e-37
Identities = 98/248 (39%), Positives = 142/248 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E V GL I+ +KEV+ LP+ +PE FD LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 147 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 206
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 207 -----ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESG 261
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +DPAL RPGR DR+I FP P+
Sbjct: 262 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNE 321
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + G L+ IA G +GA+++ +CT+A + AL+ R QE
Sbjct: 322 EARLDILKIHSRKM-NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 380
Query: 920 ILSAAAEK 927
A K
Sbjct: 381 DFEMAVAK 388
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 412 (150.1 bits), Expect = 2.5e-37, P = 2.5e-37
Identities = 100/277 (36%), Positives = 151/277 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + + + GL + IR ++EV+ LPL PE F +G+ PP+G LL
Sbjct: 129 VDPLVYNMSHEDPGDV--SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 186
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ + + KY+G++ R +R +F A QP
Sbjct: 187 YGPPGTGKTLLARAVASQLDCNFLKVV-----SSSIVDKYIGESARLIREMFNYARDHQP 241
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG + V +I ATNRP+ +DP
Sbjct: 242 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 301
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVT--GSL-LKWIAARTAGFAGADL 899
AL RPGR DR+I+ LP+ + R IL +H P+T G + + I + GF GADL
Sbjct: 302 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADL 357
Query: 900 QALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ +CT+A + A++ +F +QE A K SK++
Sbjct: 358 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 394
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 412 (150.1 bits), Expect = 2.5e-37, P = 2.5e-37
Identities = 100/277 (36%), Positives = 151/277 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + + + GL + IR ++EV+ LPL PE F +G+ PP+G LL
Sbjct: 115 VDPLVYNMSHEDPGDV--SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ + + KY+G++ R +R +F A QP
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVV-----SSSIVDKYIGESARLIREMFNYARDHQP 227
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG + V +I ATNRP+ +DP
Sbjct: 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVT--GSL-LKWIAARTAGFAGADL 899
AL RPGR DR+I+ LP+ + R IL +H P+T G + + I + GF GADL
Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADL 343
Query: 900 QALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ +CT+A + A++ +F +QE A K SK++
Sbjct: 344 RNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 412 (150.1 bits), Expect = 2.5e-37, P = 2.5e-37
Identities = 95/233 (40%), Positives = 140/233 (60%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G +D I ++EVV PLL+PE + NLG+ PP+GVLL+G PGTGKTL RA+
Sbjct: 176 YSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVAN-- 233
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 234 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDD 289
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR++ F LP
Sbjct: 290 GQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPD 349
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+ RA IL +H ++ V + + AR GA+++++CT+A + A++
Sbjct: 350 LAGRAHILKIHAKQMS--VERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIR 400
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 412 (150.1 bits), Expect = 2.5e-37, P = 2.5e-37
Identities = 95/233 (40%), Positives = 140/233 (60%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G +D I ++EVV PLL+PE + NLG+ PP+GVLL+G PGTGKTL RA+
Sbjct: 176 YSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVAN-- 233
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 234 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDD 289
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR++ F LP
Sbjct: 290 GQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPD 349
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+ RA IL +H ++ V + + AR GA+++++CT+A + A++
Sbjct: 350 LAGRAHILKIHAKQMS--VERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIR 400
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 435 (158.2 bits), Expect = 2.6e-37, P = 2.6e-37
Identities = 106/316 (33%), Positives = 178/316 (56%)
Query: 608 LARIKKLKA-RKMKMEIRKL--SNDAWRKDMEAEEKWLENCGEDEEFLKREGKRLHRDLL 664
L + LK ++K E +KL S + +++ EEK EN +K + L
Sbjct: 543 LCKEASLKCFNRIKNENQKLFQSINIEKEEKGKEEKQEENLQNLLSLIKLSMNDMLLALN 602
Query: 665 RIAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVL 724
++ P + + K+F G + G + + + +KE + PL YP+ F +G+ PP+G+L
Sbjct: 603 QVKPSSMREVVVEIPKVFWG--DIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGIL 660
Query: 725 LHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQ 784
L+G PG KTL+ +AL + + + A KG + L K+VG++ER +R +F+ A +
Sbjct: 661 LYGPPGCSKTLLAKALAT-----ESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNS 715
Query: 785 PSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPAL 844
PSI+FFDEIDGLA R+ + VVS LL MDG++ +V +IGATNRP+ +D A+
Sbjct: 716 PSILFFDEIDGLAISRSGEGSGAVERVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAI 775
Query: 845 RRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCT 904
R GR DR +Y P ++ R I ++H ++ P + + ++ T G++GA++ ++C
Sbjct: 776 LRAGRIDRILYISPPDLDARKEIFNIHLKKVPHS-SDIDINQLSILTDGYSGAEVTSICR 834
Query: 905 QAAIIALKRNFPLQEI 920
+A+I A+K + +EI
Sbjct: 835 EASIAAMKEDINAKEI 850
Score = 239 (89.2 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 51/140 (36%), Positives = 80/140 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+S+ GL ++ ++E++ L + + G+ PP+G+LL+G PGTGKTL+ R ++ +
Sbjct: 311 FQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLAR-IVAT- 368
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
F GAD L K+ G E+ L+ +F+ A + PSIIF DE+D L P R
Sbjct: 369 ---QTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKREDNS 425
Query: 805 DQTHSSVVSTLLALMDGLKS 824
+ +V +LL LMDG+ S
Sbjct: 426 SEVEKRIVGSLLTLMDGVVS 445
Score = 210 (79.0 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 38/86 (44%), Positives = 58/86 (67%)
Query: 828 VVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWI 887
V+VIG TNRP+++D ALRRPGRFD EI +P+ + R IL++ + P +T + I
Sbjct: 469 VIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAMI 528
Query: 888 AARTAGFAGADLQALCTQAAIIALKR 913
A++T GF GAD+++LC +A++ R
Sbjct: 529 ASKTHGFVGADIESLCKEASLKCFNR 554
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 411 (149.7 bits), Expect = 3.2e-37, P = 3.2e-37
Identities = 92/231 (39%), Positives = 138/231 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E V GL I+ +KEV+ LP+ +PE FD LG+ P+GVLL G PGTGKTL+ RA+
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHT 217
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 218 -----ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGS 272
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +DPAL RPGR DR+I FP P
Sbjct: 273 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDE 332
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ RA IL +H+ + + G + IA + G +GA+++++CT+A + AL+
Sbjct: 333 KARADILKIHSRKM-NLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALR 382
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 410 (149.4 bits), Expect = 4.1e-37, P = 4.1e-37
Identities = 100/277 (36%), Positives = 150/277 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + + + GL + IR ++EV+ LPL PE F +G+ PP+G LL
Sbjct: 115 VDPLVYNMSHEDPGNV--SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ + + KY+G++ R +R +F A QP
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVV-----SSSIVDKYIGESARLIREMFNYARDHQP 227
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG + V +I ATNRP+ +DP
Sbjct: 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVT--GSL-LKWIAARTAGFAGADL 899
AL RPGR DR+I+ LP+ + R IL +H P+T G + + I + GF GADL
Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAG----PITKHGEIDYEAIVKLSDGFNGADL 343
Query: 900 QALCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+CT+A + A++ +F +QE A K SK++
Sbjct: 344 GNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKL 380
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 410 (149.4 bits), Expect = 4.1e-37, P = 4.1e-37
Identities = 96/232 (41%), Positives = 137/232 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G +D I ++EVV LPLL PE F LG+ PP+G+LL+G PGTGKTL RA+
Sbjct: 208 YSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVAN-- 265
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + IIFFDEID + R
Sbjct: 266 -RTD---ATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDD 321
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP +DPAL RPGR DR++ F LP
Sbjct: 322 GAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPD 381
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+E RA I +H++ G + I+ GA+L+++CT+A + A++
Sbjct: 382 LEGRANIFRIHSKSMSVE-RGIRWELISRLCPNSTGAELRSVCTEAGMFAIR 432
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 439 (159.6 bits), Expect = 4.5e-37, Sum P(2) = 4.5e-37
Identities = 122/363 (33%), Positives = 189/363 (52%)
Query: 621 MEIRKLSNDAWRKDM--EAEEKW-LENCGEDEEFLKREGKRLHRDLLRIAPVYIGGSD-- 675
M+ +S DA ++DM + E+K E ++FL L+++ ++AP+ I D
Sbjct: 441 MDADPVSLDANKEDMIKKFEQKSEAEKLSTIKKFLNMHPDPLNQE--QLAPLAITYQDFV 498
Query: 676 ------SDSGKLFEGFESVAGL--QDV-----IRC-MKEVVILPLLYPEFFDNLGLTPPR 721
S K EGF ++ + Q+V IR + ++ P+ PE + +G+ P
Sbjct: 499 NALPSVQPSAKR-EGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPA 557
Query: 722 GVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAE 781
GVL+ G PG GKTL+ +A+ + R + + KG + L KYVG++E+ +R +FQ A
Sbjct: 558 GVLMWGPPGCGKTLLAKAVAN-----ESRANFISIKGPELLNKYVGESEKAVRQVFQRAR 612
Query: 782 KCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVD 841
P IIFFDE+D L P R ++ S VV+TLL +DGL R V VIGATNRP+ +D
Sbjct: 613 ASTPCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMID 672
Query: 842 PALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIA--ARTAGFAGAD 898
PA+ RPGR D+ +Y LP+ E+R IL P+ ++ L I+ +R F+GAD
Sbjct: 673 PAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSRCGNFSGAD 732
Query: 899 LQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCS 958
L +L +A + ALK+ F + + F + ++ D+ ALS P S
Sbjct: 733 LSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISITAEDFDHALSSIRPSVS 792
Query: 959 KRE 961
R+
Sbjct: 793 DRD 795
Score = 407 (148.3 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 687 SVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCAR 746
S+ G++ V + E++ LP+L+PE + + G+ PPRGVLL+G PG GKT + AL G
Sbjct: 194 SLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAG---- 249
Query: 747 GDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR-QQD 805
+ ++ + + G++E++LR +F+ A++ P +IF DEID + P R Q
Sbjct: 250 -ELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDGGAQR 308
Query: 806 QTHSSVVSTLLALMDGL---KSRGS-VVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ +V+ LL LMD L K+ G VVVIGATNRP+++D ALRR GRFDREI +P+
Sbjct: 309 EMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNE 368
Query: 862 EDRAAILSLHTERWPKPVTGSLLKW--IAARTAGFAGADLQALCTQAAIIALKRNFPLQE 919
E R +IL T+ K G + ++ T G+ GADL++L T A I A+KR F E
Sbjct: 369 EQRISILKAMTKNI-KLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKRIF---E 424
Query: 920 ILSAAAEKAFCSK 932
+S E++ K
Sbjct: 425 TMSELQEESHSVK 437
Score = 42 (19.8 bits), Expect = 4.5e-37, Sum P(2) = 4.5e-37
Identities = 22/97 (22%), Positives = 40/97 (41%)
Query: 220 ESGRGEELEVVRNEREDSKTIPESVVGNEGEDSKMIPESVLGVEN-VTEVVEADARVXXX 278
E L+V+R + + E+ +G+E E E+ EN + EV +++A +
Sbjct: 77 EKSIAASLKVIRQDETEEFGDRENGIGDESE-----AENDKECENDLMEVKDSNA-INKS 130
Query: 279 XXXXXXXXXXXXXXDCIGDENVEVMDTTE--KSDKER 313
D + +E + DTTE K +K +
Sbjct: 131 VVSLWNQEKTDGESDGVNNEEGQQADTTELLKGNKRK 167
Score = 42 (19.8 bits), Expect = 4.5e-37, Sum P(2) = 4.5e-37
Identities = 33/141 (23%), Positives = 61/141 (43%)
Query: 64 LRRSSRVRRAPVLLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVW 123
LRR+ R R + L+V P+ ++R + K + + K N + +E ++PG
Sbjct: 351 LRRAGRFDRE-ICLNV-PNE-EQRISILKAMTKNI-KLENGEHFNYRELSK---LTPGYV 403
Query: 124 GSRLRSRGRNVGFGAKS---DESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDLVV--- 177
G+ L+S G A + L ++ DA+ V ++ E D++
Sbjct: 404 GADLKSLVTAAGISAIKRIFETMSELQEESHSVKDDSMDADP-VSLDANKE--DMIKKFE 460
Query: 178 --SKAEKLDRFKELNDLGDEP 196
S+AEKL K+ ++ +P
Sbjct: 461 QKSEAEKLSTIKKFLNMHPDP 481
Score = 38 (18.4 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 216 GMKEESGRGEELEVVRNEREDSKTIPESVVGNEGEDSKMIPESVLGVENVTEVVEAD 272
G + E+ +E E E +DS I +SVV ++ K ES GV N E +AD
Sbjct: 103 GDESEAENDKECENDLMEVKDSNAINKSVVSLWNQE-KTDGESD-GVNN-EEGQQAD 156
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 439 (159.6 bits), Expect = 4.5e-37, Sum P(2) = 4.5e-37
Identities = 122/363 (33%), Positives = 189/363 (52%)
Query: 621 MEIRKLSNDAWRKDM--EAEEKW-LENCGEDEEFLKREGKRLHRDLLRIAPVYIGGSD-- 675
M+ +S DA ++DM + E+K E ++FL L+++ ++AP+ I D
Sbjct: 441 MDADPVSLDANKEDMIKKFEQKSEAEKLSTIKKFLNMHPDPLNQE--QLAPLAITYQDFV 498
Query: 676 ------SDSGKLFEGFESVAGL--QDV-----IRC-MKEVVILPLLYPEFFDNLGLTPPR 721
S K EGF ++ + Q+V IR + ++ P+ PE + +G+ P
Sbjct: 499 NALPSVQPSAKR-EGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPA 557
Query: 722 GVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAE 781
GVL+ G PG GKTL+ +A+ + R + + KG + L KYVG++E+ +R +FQ A
Sbjct: 558 GVLMWGPPGCGKTLLAKAVAN-----ESRANFISIKGPELLNKYVGESEKAVRQVFQRAR 612
Query: 782 KCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVD 841
P IIFFDE+D L P R ++ S VV+TLL +DGL R V VIGATNRP+ +D
Sbjct: 613 ASTPCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMID 672
Query: 842 PALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIA--ARTAGFAGAD 898
PA+ RPGR D+ +Y LP+ E+R IL P+ ++ L I+ +R F+GAD
Sbjct: 673 PAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSRCGNFSGAD 732
Query: 899 LQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCS 958
L +L +A + ALK+ F + + F + ++ D+ ALS P S
Sbjct: 733 LSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISITAEDFDHALSSIRPSVS 792
Query: 959 KRE 961
R+
Sbjct: 793 DRD 795
Score = 407 (148.3 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 687 SVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCAR 746
S+ G++ V + E++ LP+L+PE + + G+ PPRGVLL+G PG GKT + AL G
Sbjct: 194 SLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAG---- 249
Query: 747 GDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR-QQD 805
+ ++ + + G++E++LR +F+ A++ P +IF DEID + P R Q
Sbjct: 250 -ELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDGGAQR 308
Query: 806 QTHSSVVSTLLALMDGL---KSRGS-VVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ +V+ LL LMD L K+ G VVVIGATNRP+++D ALRR GRFDREI +P+
Sbjct: 309 EMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNE 368
Query: 862 EDRAAILSLHTERWPKPVTGSLLKW--IAARTAGFAGADLQALCTQAAIIALKRNFPLQE 919
E R +IL T+ K G + ++ T G+ GADL++L T A I A+KR F E
Sbjct: 369 EQRISILKAMTKNI-KLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKRIF---E 424
Query: 920 ILSAAAEKAFCSK 932
+S E++ K
Sbjct: 425 TMSELQEESHSVK 437
Score = 42 (19.8 bits), Expect = 4.5e-37, Sum P(2) = 4.5e-37
Identities = 22/97 (22%), Positives = 40/97 (41%)
Query: 220 ESGRGEELEVVRNEREDSKTIPESVVGNEGEDSKMIPESVLGVEN-VTEVVEADARVXXX 278
E L+V+R + + E+ +G+E E E+ EN + EV +++A +
Sbjct: 77 EKSIAASLKVIRQDETEEFGDRENGIGDESE-----AENDKECENDLMEVKDSNA-INKS 130
Query: 279 XXXXXXXXXXXXXXDCIGDENVEVMDTTE--KSDKER 313
D + +E + DTTE K +K +
Sbjct: 131 VVSLWNQEKTDGESDGVNNEEGQQADTTELLKGNKRK 167
Score = 42 (19.8 bits), Expect = 4.5e-37, Sum P(2) = 4.5e-37
Identities = 33/141 (23%), Positives = 61/141 (43%)
Query: 64 LRRSSRVRRAPVLLDVSPSPVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVW 123
LRR+ R R + L+V P+ ++R + K + + K N + +E ++PG
Sbjct: 351 LRRAGRFDRE-ICLNV-PNE-EQRISILKAMTKNI-KLENGEHFNYRELSK---LTPGYV 403
Query: 124 GSRLRSRGRNVGFGAKS---DESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDLVV--- 177
G+ L+S G A + L ++ DA+ V ++ E D++
Sbjct: 404 GADLKSLVTAAGISAIKRIFETMSELQEESHSVKDDSMDADP-VSLDANKE--DMIKKFE 460
Query: 178 --SKAEKLDRFKELNDLGDEP 196
S+AEKL K+ ++ +P
Sbjct: 461 QKSEAEKLSTIKKFLNMHPDP 481
Score = 38 (18.4 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 216 GMKEESGRGEELEVVRNEREDSKTIPESVVGNEGEDSKMIPESVLGVENVTEVVEAD 272
G + E+ +E E E +DS I +SVV ++ K ES GV N E +AD
Sbjct: 103 GDESEAENDKECENDLMEVKDSNAINKSVVSLWNQE-KTDGESD-GVNN-EEGQQAD 156
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 434 (157.8 bits), Expect = 4.8e-37, P = 4.8e-37
Identities = 98/238 (41%), Positives = 139/238 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E V G +V + E V P + + F +G PP G+L+ G PG KTL+ RA+
Sbjct: 723 WEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVAS-- 780
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ ++ + A KG + K+VG++E+ +R LF A PSIIFFDEID LA R ++
Sbjct: 781 ---EAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKEN 837
Query: 805 DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSME 862
D S V+S LL +DGL R V VI ATNRP+ +D AL RPGRFDR +Y P+
Sbjct: 838 DGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNET 897
Query: 863 DRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
DR AIL +H + P + LK +A+ T G+ GAD+ +C +AAI AL+ + ++EI
Sbjct: 898 DREAILKIHLRKIPCS-SDICLKELASITKGYTGADISLICREAAIAALEESLEMEEI 954
Score = 408 (148.7 bits), Expect = 3.2e-34, P = 3.2e-34
Identities = 89/247 (36%), Positives = 142/247 (57%)
Query: 670 YIGGSDSDSGKLFEGFE--SVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHG 727
++ G D G+ G E + GL +++++ + +LGL P +GVL+HG
Sbjct: 368 FVQGLQFDEGENV-GCEISKLGGLSKEYAILRDIIDSSSI-KNSLSSLGLRPTKGVLIHG 425
Query: 728 HPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSI 787
PGTGKT + R AR + +F+ G + + +Y+G++E+ L +F+ A P++
Sbjct: 426 PPGTGKTSLARTF----AR-HSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAV 480
Query: 788 IFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRP 847
+F D++D +AP R ++ +V+TLL LMDG+ VVVI ATNRP++++PALRRP
Sbjct: 481 VFIDDLDAIAPARKEGGEELSQRMVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRP 540
Query: 848 GRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAA 907
GR DREI +PS R+ IL + ++ ++ +A T GF GADL ALC +AA
Sbjct: 541 GRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAA 600
Query: 908 IIALKRN 914
+ L+R+
Sbjct: 601 FVCLRRH 607
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 408 (148.7 bits), Expect = 6.7e-37, P = 6.7e-37
Identities = 99/277 (35%), Positives = 151/277 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G + + + GL + IR ++EV+ LPL PE F +G+ PP+G LL
Sbjct: 115 VDPLVYNMSHEDPGSV--SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ ++ + + KY+G++ R +R +F A QP
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVV-----SSSIVDKYIGESARLIREMFNYARDHQP 227
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L MDG + V +I ATNRP+ +DP
Sbjct: 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVT--GSL-LKWIAARTAGFAGADL 899
AL RPGR DR+I+ LP+ + R IL +H+ P+T G + + I + GF GADL
Sbjct: 288 ALLRPGRLDRKIHIELPNEQARLDILKIHSG----PITKHGDIDYEAIVKLSDGFNGADL 343
Query: 900 QALCTQAAIIALKRN--FPLQEILSAAAEKAFCSKRV 934
+ +CT+A + A++ + + QE A K SK++
Sbjct: 344 RNVCTEAGMFAIRADHEYVTQEDFMKAVRKVADSKKL 380
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 407 (148.3 bits), Expect = 8.6e-37, P = 8.6e-37
Identities = 109/284 (38%), Positives = 158/284 (55%)
Query: 652 LKREGKRLHRDLL-RIAPVYIGGSDSDSGKLFEG-FESVAGLQDVIRCMKEVVILPLLYP 709
LK E LHR L +I P+ S K+ + ++ V GL I+ +KEV+ LP+ +P
Sbjct: 112 LKHESYTLHRILPNKIDPLV---SLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHP 168
Query: 710 EFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDA 769
E F++LG+ P+GVLL+G PGTGKTL+ RA+ D + G++ + KY+G+
Sbjct: 169 ELFESLGIAQPKGVLLYGPPGTGKTLLARAV---AHHTD--CTFIRVSGSELVQKYIGEG 223
Query: 770 ERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ-QDQTHSSVVSTLLALM---DGLKSR 825
R +R LF +A + PSIIF DEID + R S V T+L L+ DG +S
Sbjct: 224 SRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFEST 283
Query: 826 GSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLK 885
++ V+ TNR + +DPAL RPGR DR+I FP P R IL +H+ + G LK
Sbjct: 284 KNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKM-NLTRGINLK 342
Query: 886 WIAARTAGFAGADLQALCTQAAIIALK--RNFPLQEILSAAAEK 927
I+ + G +GA+L+A+CT+A + AL+ R QE A K
Sbjct: 343 KISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSK 386
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 407 (148.3 bits), Expect = 8.6e-37, P = 8.6e-37
Identities = 98/248 (39%), Positives = 143/248 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E V GL I+ +KEV+ LP+ +PE FD LG+T P+GVLL+G PGTGKTL+ RA+
Sbjct: 142 YEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHT 201
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ G++ + K++G+ R +R LF +A + PSIIF DEID + R +
Sbjct: 202 -----ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARL-ET 255
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +D AL RPGR DR+I FP P+
Sbjct: 256 GTGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNE 315
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + G L+ IA G +GA+++ +CT+A + AL+ R QE
Sbjct: 316 EARLDILKIHSRKM-NLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQE 374
Query: 920 ILSAAAEK 927
A K
Sbjct: 375 DFEMAVSK 382
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 407 (148.3 bits), Expect = 8.6e-37, P = 8.6e-37
Identities = 96/233 (41%), Positives = 137/233 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 231
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 232 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+E R IL +H V + + AR GA+++++CT+A + A++
Sbjct: 348 LEGRTHILKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 396 (144.5 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 97/275 (35%), Positives = 150/275 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ S D G++ F + GL D IR ++EV+ LPL PE F +G+ PP+GVLL
Sbjct: 119 VDPLVYNMSLEDPGQI--NFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLL 176
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ S ++ A + KY+G++ R +R +F A++ +P
Sbjct: 177 YGPPGTGKTLLARAVASSMETNFLKVVSSA-----IVDKYIGESARLIREMFGYAKEHEP 231
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDP 842
IIF DEID + R + + TL+ L+ DG G +I ATNRP+ +DP
Sbjct: 232 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDP 291
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQA 901
AL R GR DR+I PLP+ R IL +H+ + G + + + + G GADL+
Sbjct: 292 ALLRAGRLDRKIEIPLPNEVGRLEILKIHSST--VQMEGDIDFESVVKMSDGLNGADLRN 349
Query: 902 LCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+ T+A + A+K R+ Q+ + A K +K++
Sbjct: 350 VVTEAGLFAIKDYRDAINQDDFNRAVRKVAEAKKL 384
Score = 37 (18.1 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 151 KLFREMDEDAESEVGMEKGSEGGDLVVSKAEKLDRFK 187
++ E+ + + E + K S G VV K+DR K
Sbjct: 59 QIIGEVLKQLDEERFIVKASSGPRYVVGCRSKVDRSK 95
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 426 (155.0 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 105/257 (40%), Positives = 147/257 (57%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
VAGL DV +KE+V LP +P F LGL+ P GVLL G PG GKTL+V+A+ AR
Sbjct: 199 VAGLDDVGESLKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAV----AR- 253
Query: 748 DKRIAYF-ARKGADCLGKYVGDAERQLRLLFQVAEK--CQ-PSIIFFDEIDGLAPCRTRQ 803
+ AY G G G++E LR +F+ + C+ P+++F DEID L P R
Sbjct: 254 -EAGAYLLCISGPALYGSRPGESEENLRSVFEKGREMSCEGPTVLFIDEIDALCPKRGSS 312
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+V+ LL L+DG+ + +VV+ ATNRP+A+DPALRRPGRFDRE+ P++
Sbjct: 313 NSAPEDRLVAQLLTLLDGVGRKDRMVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQ 372
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIAL-KRNFPLQEILS 922
R +IL + T P L+K +A T G+ GADL ALC +AA+ A+ + E+L
Sbjct: 373 RRSILQMLTCSMPISTDIDLVK-LAEMTTGYVGADLTALCREAAMQAVFHSSLDSAEVLI 431
Query: 923 AAAEKAFCSKRVTLPSF 939
A+ K++ SF
Sbjct: 432 NMADFQEAFKKIQPSSF 448
Score = 263 (97.6 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 88/288 (30%), Positives = 145/288 (50%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV +K+ V P+ P+ F +GL P+GVLL+G G KT +V+A+ SC
Sbjct: 462 WEQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPKGVLLYGPSGCAKTTLVKAVATSC 521
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++ + GA+ YVGD+E+ L +F+ A P+IIF DEID + R+ +
Sbjct: 522 -----HCSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPAIIFLDEIDSILGSRSHSK 576
Query: 805 DQTHSS--VVSTLLALMDGL-----KSRGSVVVIG-----ATNRPEAVDPALRRPGRFDR 852
S V+S LL +DG+ + RG+ + + +R V A RP D
Sbjct: 577 SGHGVSERVLSVLLNELDGVGLKVTERRGNKLQLELEFQETLSRDFMVVAATNRPDMLDD 636
Query: 853 EIYFP--------LPSMEDRAAILSLHTERWPKPV-TGSLLKWIAARTAGFAGADLQALC 903
+ P +P + + + L P+ T L+ IAART F+GAD++ LC
Sbjct: 637 ALLRPGRLDRVIYIPPPDLKGRLSILKICTEKIPLDTDVSLQDIAARTDLFSGADIENLC 696
Query: 904 TQAAIIALKRNFPLQEILSAAAEKAFCSKRVTL-PSFAVEERDWLEAL 950
+AA++AL+ N L+ +A F T+ PS ++++ ++ E +
Sbjct: 697 KEAALLALQEN-GLEA--TAVKHGHFVKSLQTVKPSLSMKDLEFYEKI 741
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 404 (147.3 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 102/251 (40%), Positives = 148/251 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV +PLL PE F NLG+ PP+G LL+G PGTGKTL RA+
Sbjct: 184 YGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVAN-- 241
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + IIFFDEID + R
Sbjct: 242 -RTD---ATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDD 297
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG +RG++ V+ ATNRP +DPAL RPGR DR+I F LP
Sbjct: 298 GAGGDNEVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPD 357
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKW-IAARTAGFA-GADLQALCTQAAIIALK--RNFP 916
+E RA IL +H + V + +W + +R A GA+L+++ T+A + A++ R
Sbjct: 358 VEGRANILRIHAKSMS--VERDI-RWELISRLCPNATGAELRSVATEAGMFAIRARRKVA 414
Query: 917 LQEILSAAAEK 927
++ AA +K
Sbjct: 415 TEKDFLAAVDK 425
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 425 (154.7 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 97/228 (42%), Positives = 138/228 (60%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
+ GL + ++E++ LPLLYP F +LGL PRGVLL G PG GKT +VRA+ G
Sbjct: 202 LGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPGVGKTQLVRAVAREA--G 259
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKC---QPSIIFFDEIDGLAPCRTRQQ 804
+ +A A G G+ E +R +FQ A++ +P+++F DE+D L P R
Sbjct: 260 AELLAVSAPA---LQGARPGETEENVRRVFQRAQELAGRRPTLLFLDEVDALCPRRGGPH 316
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
S VV+ +L L+DG+ VVV+G+TNRP+A+DPALRRPGRFDRE+ P++ R
Sbjct: 317 QAPESRVVAQVLTLLDGISGDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQR 376
Query: 865 AAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIAL 911
AIL + T + P ++ + L +A T G+ GADL ALC +AA+ AL
Sbjct: 377 KAILQVITSKMP--ISSQVDLSLLAEMTVGYVGADLTALCREAAMHAL 422
Score = 385 (140.6 bits), Expect = 4.6e-32, P = 4.6e-32
Identities = 98/251 (39%), Positives = 141/251 (56%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+D R +K+ + PL +P F +GLT P+GVLL+G PG KT +VRAL SC
Sbjct: 465 WEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSC 524
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++ + GAD +VGD+E+ L +FQ A P+++F DEID + R+ +
Sbjct: 525 -----HCSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSILGSRSISK 579
Query: 805 D--QTHSSVVSTLLALMDG--LKS---RGS--------------VVVIGATNRPEAVDPA 843
V+S LL +DG LK+ RGS V+++ ATNRP+ +D A
Sbjct: 580 TGCNVQERVLSVLLNELDGVGLKTIERRGSKSDQHEFQEVFNSNVMIVAATNRPDVLDDA 639
Query: 844 LRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALC 903
L RPGR D+ IY P P + R +IL + T+ P SL +AA T F+GADL LC
Sbjct: 640 LLRPGRLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLEN-LAAETCLFSGADLGNLC 698
Query: 904 TQAAIIALKRN 914
+AA++AL+ N
Sbjct: 699 KEAALLALQEN 709
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 403 (146.9 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 95/233 (40%), Positives = 136/233 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 165 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 222
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 223 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 278
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP
Sbjct: 279 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 338
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 339 LEGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 389
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 403 (146.9 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 95/233 (40%), Positives = 136/233 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 173 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 230
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 231 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 286
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP
Sbjct: 287 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 346
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 347 LEGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 397
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 403 (146.9 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 95/233 (40%), Positives = 136/233 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 231
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 232 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 348 LEGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 403 (146.9 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 95/233 (40%), Positives = 136/233 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 231
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 232 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 348 LEGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 403 (146.9 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 95/233 (40%), Positives = 136/233 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 37 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 94
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 95 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 150
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP
Sbjct: 151 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 210
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 211 LEGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 261
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 403 (146.9 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 95/233 (40%), Positives = 136/233 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 231
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 232 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 348 LEGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 403 (146.9 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 95/233 (40%), Positives = 136/233 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 216 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 273
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 274 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 329
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP
Sbjct: 330 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 389
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 390 LEGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 440
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 403 (146.9 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 95/233 (40%), Positives = 136/233 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 175 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 232
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 233 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 288
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP
Sbjct: 289 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 348
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 349 LEGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 399
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 403 (146.9 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 95/233 (40%), Positives = 136/233 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 231
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 232 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 348 LEGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 403 (146.9 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 95/233 (40%), Positives = 136/233 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 231
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 232 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 348 LEGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 403 (146.9 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 95/233 (40%), Positives = 136/233 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 231
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 232 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 348 LEGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 403 (146.9 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 95/233 (40%), Positives = 136/233 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 231
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 232 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
+E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 348 LEGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 402 (146.6 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 97/275 (35%), Positives = 149/275 (54%)
Query: 666 IAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLL 725
+ P+ + G + G + GL + IR ++EVV LPL+ PE F +G+ P+GVLL
Sbjct: 119 VDPIIFNMTAESPGSVSYG--EIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLL 176
Query: 726 HGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 785
+G PGTGKTL+ RA+ + ++ A + KY+G++ R +R +F A QP
Sbjct: 177 YGPPGTGKTLLARAIASNLEANFLKVVSSA-----IVDKYIGESARVIREMFGYARDHQP 231
Query: 786 SIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDP 842
+IF DEID + R + + TL+ L MDG + V +I ATNRP+ +DP
Sbjct: 232 CVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDP 291
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQA 901
AL RPGR DR+I PLP+ R +L +H K G + + IA GF ADL+
Sbjct: 292 ALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKH--GDVDYEAIAKLADGFNAADLRN 349
Query: 902 LCTQAAIIALK--RNFPLQEILSAAAEKAFCSKRV 934
+CT+A + A++ R++ ++E A K +K++
Sbjct: 350 VCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKKL 384
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 400 (145.9 bits), Expect = 4.8e-36, P = 4.8e-36
Identities = 95/234 (40%), Positives = 137/234 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV LPLL PE F LG+ PP+G++L+G PGTGKTL RA+
Sbjct: 178 YGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVAN-- 235
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + IIFFDEID + R
Sbjct: 236 -RTD---ATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDD 291
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP +D AL RPGR DR++ F LP
Sbjct: 292 GAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPD 351
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKW--IAARTAGFAGADLQALCTQAAIIALK 912
+E RA IL +H + ++W IA GA+L+++CT+A + A++
Sbjct: 352 LEGRAHILRIHAKSM---AIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIR 402
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 399 (145.5 bits), Expect = 6.2e-36, P = 6.2e-36
Identities = 96/248 (38%), Positives = 146/248 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E V GL ++ +KEV+ LP+ +PE F++LG++ P+GVLL+G PGTGKTL+ RA+
Sbjct: 178 YEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAV---A 234
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
D + G++ + KY+G+ R +R LF +A + PSIIF DEID + R +
Sbjct: 235 HHTD--CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRI-EG 291
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ S V T++ L+ DG +S ++ VI TNR + +D AL RPGR DR+I FP P++
Sbjct: 292 EHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNV 351
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + +LK IA +GA+++A+CT+A + AL+ R QE
Sbjct: 352 EARMEILKIHSRKMNLMRGIDMLK-IATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQE 410
Query: 920 ILSAAAEK 927
A K
Sbjct: 411 DFEMAVAK 418
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 399 (145.5 bits), Expect = 6.2e-36, P = 6.2e-36
Identities = 96/248 (38%), Positives = 146/248 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E V GL ++ +KEV+ LP+ +PE F++LG++ P+GVLL+G PGTGKTL+ RA+
Sbjct: 178 YEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAV---A 234
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
D + G++ + KY+G+ R +R LF +A + PSIIF DEID + R +
Sbjct: 235 HHTD--CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRI-EG 291
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ S V T++ L+ DG +S ++ VI TNR + +D AL RPGR DR+I FP P++
Sbjct: 292 EHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNV 351
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + +LK IA +GA+++A+CT+A + AL+ R QE
Sbjct: 352 EARMEILKIHSRKMNLMRGIDMLK-IATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQE 410
Query: 920 ILSAAAEK 927
A K
Sbjct: 411 DFEMAVAK 418
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 399 (145.5 bits), Expect = 6.2e-36, P = 6.2e-36
Identities = 92/232 (39%), Positives = 134/232 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 231
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
R D + G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 232 -RTDA--CFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDG 288
Query: 805 DQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP +
Sbjct: 289 AGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 349 EGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 399 (145.5 bits), Expect = 6.2e-36, P = 6.2e-36
Identities = 92/232 (39%), Positives = 134/232 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 231
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
R D + G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 232 -RTDA--CFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDG 288
Query: 805 DQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR+I F LP +
Sbjct: 289 AGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
E R I +H V + + AR GA+++++CT+A + A++
Sbjct: 349 EGRTHIFKIHARSMS--VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 418 (152.2 bits), Expect = 7.4e-36, Sum P(2) = 7.4e-36
Identities = 94/235 (40%), Positives = 132/235 (56%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ V L V + ++ P+ YP+ + N+G+ P GVL++G PG GKTL+ +A+ C
Sbjct: 565 WDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIASEC 624
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L KYVG++ER +R +FQ A P +IFFDE D LAP R
Sbjct: 625 QAN-----FISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGD 679
Query: 805 ---DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+Q VV+ LL MDGL+ R V +I ATNRP+ +D A+ RPGR D+ +Y PLPS
Sbjct: 680 GGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSP 739
Query: 862 EDRAAILSLHTERWPKPVTGSLLK-WIAARTAGFAGADLQALCTQAAIIALKRNF 915
E+R IL T + P L+K R F+GADL L +AA A+ R F
Sbjct: 740 EERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISRGF 794
Score = 240 (89.5 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 54/153 (35%), Positives = 82/153 (53%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F ++ G++ +R ++E + P+ +PE + +LG+ PPRG+LLHG G GKTL+ +A+ G
Sbjct: 215 FSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAG-- 272
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ ++ FA + G++E ++R LF A P IIF DEID +AP R
Sbjct: 273 ---ELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESAS 329
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRP 837
+VS LL MD L S +TN P
Sbjct: 330 KDMERRIVSQLLTCMDSLNYLSSN---NSTNEP 359
Score = 161 (61.7 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 41/111 (36%), Positives = 60/111 (54%)
Query: 825 RGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLL 884
+G V+VIGATNRPE++D ALR GRFD+EI +P R IL + T + +
Sbjct: 400 KGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKM-RLENNFDY 458
Query: 885 KWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVT 935
+ IA T G+ GAD+ L +AA ++ R F + A++ + S T
Sbjct: 459 EEIATLTPGYVGADINLLVKEAATNSVNRIFT-SNLNGASSSSSSSSSSTT 508
Score = 54 (24.1 bits), Expect = 7.4e-36, Sum P(2) = 7.4e-36
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 597 RHLFQPYGDQYLARIKKLKARKMKMEIRKLSNDAWRKDMEAEEKWLENCGEDEEFL 652
R ++ Y + L K+L + M I+ LS+ ++ + + K E+ G+D E +
Sbjct: 41 RKVYPEYNRKPLKGFKQLVEKAMNQIIKNLSSCESSENEDGDNKMEESDGDDVEII 96
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 398 (145.2 bits), Expect = 7.9e-36, P = 7.9e-36
Identities = 92/234 (39%), Positives = 137/234 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V G ++ I ++EVV PLL+PE F NLG+ PP+GVLL G PGTGKTL RA+
Sbjct: 174 YSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN-- 231
Query: 745 ARGDKRIAYFARK-GADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
R D A F R G++ + KYVG+ R +R LF++A + +IFFDEID + R
Sbjct: 232 -RTD---ACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDD 287
Query: 804 QDQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
+ V T+L L +DG RG++ V+ ATNRP+ +DPAL RPGR DR++ F LP
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPD 347
Query: 861 MEDRAAILSLHTERWP--KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
+ R+ I +H + + LL + + G A+++++CT+A + A++
Sbjct: 348 QDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTG---AEIRSVCTEAGMFAIR 398
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 421 (153.3 bits), Expect = 1.0e-35, P = 1.0e-35
Identities = 91/234 (38%), Positives = 134/234 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ + L+ + +K V+ P+ YPE + LGLT P GVLL G PG GKTL+ +A+
Sbjct: 661 WDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEA 720
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
I + + KG + + YVG++ER +R FQ A P +IFFDE D L P R+
Sbjct: 721 G-----INFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGG 775
Query: 805 DQTHSS--VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSME 862
D +S +V+ LL MDG++ R V ++ ATNRP+ +DPA+ RPGR D +Y P
Sbjct: 776 DGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQS 835
Query: 863 DRAAILSLHTERWPKPVTGSL--LKWIAARTAGFAGADLQALCTQAAIIALKRN 914
+R IL T+ +PV L IAA+T G+ GADL L QA++ +L+++
Sbjct: 836 ERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQS 889
Score = 366 (133.9 bits), Expect = 4.1e-29, Sum P(2) = 4.1e-29
Identities = 102/283 (36%), Positives = 150/283 (53%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E F + G+ ++ + E++I + PEF+ LGL P RG+LLHG PG GKT + RA+ G
Sbjct: 248 ESFRDIGGMDSTLKELCEMLI-HIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISG 306
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
++ + +G G++E ++R +F A P ++F DEID + R
Sbjct: 307 QL-----KMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQW 361
Query: 803 QQDQTHSSVVSTLLALMDGLKSR--G-SVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+VS L++ +D LK+ G SVVVI AT RP+ +DP LRR GRFD EI +P
Sbjct: 362 ASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIP 421
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQ- 918
S ++R IL + E + K IA T G+ GADL AL ++AA +A+KR +
Sbjct: 422 SRKERREILRIQCEGLSVDPKLNYDK-IAELTPGYVGADLMALVSRAASVAVKRRSMKKF 480
Query: 919 EILSAAAEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKRE 961
L AA+EK + VTL ++ + E +P P SK E
Sbjct: 481 RELHAASEKNMTT--VTL-----DDDEPSEDAGETPVPDSKGE 516
Score = 46 (21.3 bits), Expect = 4.1e-29, Sum P(2) = 4.1e-29
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 1094 LLQNISCTASKGSGFRVLISGSPGSGQRHLAACL 1127
+L+ + TA G VL+ G PG G+ LA +
Sbjct: 687 MLERLGLTAPSG----VLLCGPPGCGKTLLAKAI 716
Score = 37 (18.1 bits), Expect = 3.6e-28, Sum P(2) = 3.6e-28
Identities = 6/10 (60%), Positives = 6/10 (60%)
Query: 950 LSCSPPPCSK 959
L C PP C K
Sbjct: 700 LLCGPPGCGK 709
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 432 (157.1 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 101/284 (35%), Positives = 158/284 (55%)
Query: 687 SVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCAR 746
+V LQ V + ++ P+ PE ++ +G++ P GVLL G PG GKTL+ +A+
Sbjct: 534 NVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVAN---- 589
Query: 747 GDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQ 806
+ R + + KG + L KYVG++ER +R +F A P +IFFDE+D L P R +
Sbjct: 590 -ESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSE 648
Query: 807 THSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAA 866
+ S VV+TLL +DGL R + VIGATNRP+ +DPA+ RPGR D+ ++ LP+ E++
Sbjct: 649 SSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLD 708
Query: 867 ILSLHTERWPKPVTGSL-LKWIAA--RTAGFAGADLQALCTQAAIIALKRNF----PLQE 919
I+ T+ P++ + + I + F+GADL AL +++++ALKR F +Q
Sbjct: 709 IIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQS 768
Query: 920 ILSAAAEKAF--CSKRVTLPSFAVEERDWLEALSCSPPPCSKRE 961
+L +K F S V+ V D+ AL P S ++
Sbjct: 769 VLDNDLDKEFEDLSVGVSGEEIIVTMSDFRSALRKIKPSVSDKD 812
Score = 428 (155.7 bits), Expect = 4.3e-35, Sum P(3) = 4.3e-35
Identities = 110/321 (34%), Positives = 166/321 (51%)
Query: 601 QPYGDQYLARIKKLKARKMKMEIRKLSNDAWRKDMEAEEKWLENCGEDEEFLKREGKRLH 660
+P ++ LA+ K + + E+ K W K E E E +K+ KR
Sbjct: 124 KPSLEEELAK-KNMMIERDTNEMNKRITSTWSKSGSVSESITETDDPKTEEVKKSKKRSK 182
Query: 661 RDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPP 720
++ I D +S+ G+ DV+ + E++ LP+L+PE F + G+ PP
Sbjct: 183 EGTCKVKRQKI---KEDRSPPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPP 239
Query: 721 RGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVA 780
RGVLLHG PG GKT + AL G + ++ + + + G++E+++R LF A
Sbjct: 240 RGVLLHGPPGCGKTSIANALAG-----ELQVPFISISAPSVVSGMSGESEKKIRDLFDEA 294
Query: 781 EKCQPSIIFFDEIDGLAPCRTR-QQDQTHSSVVSTLLALMDGL---KSRGS-VVVIGATN 835
P ++FFDEID + P R Q + +V+ LL MD L K+ G V++IGATN
Sbjct: 295 RSLAPCLVFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATN 354
Query: 836 RPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGF 894
RP+++D ALRR GRFDREI +P+ R IL ++ + G++ +A T GF
Sbjct: 355 RPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLK--IDGAIDFAKLAKLTPGF 412
Query: 895 AGADLQALCTQAAIIALKRNF 915
GADL+AL T A A+KR F
Sbjct: 413 VGADLKALVTAAGTCAIKRIF 433
Score = 42 (19.8 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 227 LEVVRNEREDSKTIPESVVGNEGEDSKMIPESVLGVENVT 266
L+ R+ R++S+ E NEGE+ + I ES+ +++T
Sbjct: 32 LDRKRSLRQESQG--EEGENNEGEEDEDIFESMFFAKDLT 69
Score = 40 (19.1 bits), Expect = 1.9e-35, Sum P(3) = 1.9e-35
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 47 EDDDEAAETGSAARNLELRRSSRVRRAPVLLDVSP--SPVKKRRKMDKTV 94
E DD E ++ + +V+R + D SP S +K MD V
Sbjct: 165 ETDDPKTEEVKKSKKRSKEGTCKVKRQKIKEDRSPPNSSLKSLGGMDDVV 214
Score = 40 (19.1 bits), Expect = 7.0e-35, Sum P(3) = 7.0e-35
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 375 GEHNEGEDHPD 385
GE+NEGE+ D
Sbjct: 47 GENNEGEEDED 57
Score = 38 (18.4 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 526 PEVYFAGLGCLKNIRAAL 543
P+V +A +G L+ +R L
Sbjct: 528 PDVTWANVGALQRVRLEL 545
Score = 37 (18.1 bits), Expect = 4.3e-35, Sum P(3) = 4.3e-35
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 1110 VLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDL 1142
VL+ G PG G+ LA + + N + I+ +L
Sbjct: 570 VLLWGPPGCGKTLLAKAVANESRANFISIKGPEL 603
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 396 (144.5 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 96/248 (38%), Positives = 142/248 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL I+ +KEV+ LP+ +PE F+ LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 154 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV---A 210
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
D + G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 211 HHTD--CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 268
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +D AL RPGR DR+I FP P+
Sbjct: 269 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 328
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + G L+ IA G +GA+++ +CT+A + AL+ R QE
Sbjct: 329 EARLDILKIHSRKM-NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 387
Query: 920 ILSAAAEK 927
A K
Sbjct: 388 DFEMAVAK 395
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 396 (144.5 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 96/248 (38%), Positives = 142/248 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL I+ +KEV+ LP+ +PE F+ LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV---A 204
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
D + G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 205 HHTD--CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +D AL RPGR DR+I FP P+
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + G L+ IA G +GA+++ +CT+A + AL+ R QE
Sbjct: 323 EARLDILKIHSRKM-NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Query: 920 ILSAAAEK 927
A K
Sbjct: 382 DFEMAVAK 389
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 396 (144.5 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 96/248 (38%), Positives = 142/248 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL I+ +KEV+ LP+ +PE F+ LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV---A 204
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
D + G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 205 HHTD--CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +D AL RPGR DR+I FP P+
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + G L+ IA G +GA+++ +CT+A + AL+ R QE
Sbjct: 323 EARLDILKIHSRKM-NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Query: 920 ILSAAAEK 927
A K
Sbjct: 382 DFEMAVAK 389
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 396 (144.5 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 96/248 (38%), Positives = 142/248 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL I+ +KEV+ LP+ +PE F+ LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV---A 204
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
D + G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 205 HHTD--CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +D AL RPGR DR+I FP P+
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + G L+ IA G +GA+++ +CT+A + AL+ R QE
Sbjct: 323 EARLDILKIHSRKM-NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Query: 920 ILSAAAEK 927
A K
Sbjct: 382 DFEMAVAK 389
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 396 (144.5 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 96/248 (38%), Positives = 142/248 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL I+ +KEV+ LP+ +PE F+ LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV---A 204
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
D + G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 205 HHTD--CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +D AL RPGR DR+I FP P+
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + G L+ IA G +GA+++ +CT+A + AL+ R QE
Sbjct: 323 EARLDILKIHSRKM-NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Query: 920 ILSAAAEK 927
A K
Sbjct: 382 DFEMAVAK 389
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 396 (144.5 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 96/248 (38%), Positives = 142/248 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL I+ +KEV+ LP+ +PE F+ LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 156 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV---A 212
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
D + G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 213 HHTD--CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 270
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +D AL RPGR DR+I FP P+
Sbjct: 271 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 330
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + G L+ IA G +GA+++ +CT+A + AL+ R QE
Sbjct: 331 EARLDILKIHSRKM-NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 389
Query: 920 ILSAAAEK 927
A K
Sbjct: 390 DFEMAVAK 397
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 396 (144.5 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 96/248 (38%), Positives = 142/248 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL I+ +KEV+ LP+ +PE F+ LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 156 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV---A 212
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
D + G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 213 HHTD--CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 270
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +D AL RPGR DR+I FP P+
Sbjct: 271 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 330
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + G L+ IA G +GA+++ +CT+A + AL+ R QE
Sbjct: 331 EARLDILKIHSRKM-NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 389
Query: 920 ILSAAAEK 927
A K
Sbjct: 390 DFEMAVAK 397
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 396 (144.5 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 96/248 (38%), Positives = 142/248 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL I+ +KEV+ LP+ +PE F+ LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV---A 204
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
D + G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 205 HHTD--CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +D AL RPGR DR+I FP P+
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + G L+ IA G +GA+++ +CT+A + AL+ R QE
Sbjct: 323 EARLDILKIHSRKM-NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Query: 920 ILSAAAEK 927
A K
Sbjct: 382 DFEMAVAK 389
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 396 (144.5 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 96/248 (38%), Positives = 142/248 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL I+ +KEV+ LP+ +PE F+ LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV---A 204
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
D + G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 205 HHTD--CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +D AL RPGR DR+I FP P+
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + G L+ IA G +GA+++ +CT+A + AL+ R QE
Sbjct: 323 EARLDILKIHSRKM-NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Query: 920 ILSAAAEK 927
A K
Sbjct: 382 DFEMAVAK 389
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 396 (144.5 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 96/248 (38%), Positives = 142/248 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL I+ +KEV+ LP+ +PE F+ LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV---A 204
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
D + G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 205 HHTD--CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGG 262
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +D AL RPGR DR+I FP P+
Sbjct: 263 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + G L+ IA G +GA+++ +CT+A + AL+ R QE
Sbjct: 323 EARLDILKIHSRKM-NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Query: 920 ILSAAAEK 927
A K
Sbjct: 382 DFEMAVAK 389
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 407 (148.3 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 100/234 (42%), Positives = 138/234 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V GLQ+V + + E + LPL +PE +LGL G+LLHG PGTGKTL+ +A+ C
Sbjct: 294 WHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKAVATEC 351
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + + KG + + YVG +E +R +F A P IIFFDE+D LAP R R
Sbjct: 352 S-----LTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSG 406
Query: 805 DQ--THSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSME 862
D VVS LLA +DGL S V VIGATNRP+ +DPAL RPGRFD+ ++ + + E
Sbjct: 407 DSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVF--VGANE 464
Query: 863 DRAA---ILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
DRA+ +LS T ++ + SL+ + GADL +LC+ A ALKR
Sbjct: 465 DRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKR 518
Score = 154 (59.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 75/261 (28%), Positives = 114/261 (43%)
Query: 676 SDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTL 735
S+ L+ S GL+ ++ + V+ P L P LT VLL G PG GKT
Sbjct: 14 SEKSTLWSSL-SPPGLEALVSELC-AVLKPRLQP---GGALLTGTSSVLLRGPPGCGKTT 68
Query: 736 VVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDG 795
VV A +C++ + C G E +L+ +F A +C+P+++ +D
Sbjct: 69 VVAA---ACSQLGLHLLKVPCSSL-CADSS-GAVETKLQAIFSRARRCRPAVLLLTAVDL 123
Query: 796 LAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDR 852
L R R + VV+ L L+ D L S ++V+ T+R + + PA + F
Sbjct: 124 LG--RDRDGLGEDARVVAALRHLLLDEDPLNSCPPLMVVATTSRAQDL-PADVQTA-FPH 179
Query: 853 EIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
E+ P S R +IL T P +L + +A R AGF DL AL T ++ A
Sbjct: 180 ELEVPALSEGQRLSILRALTAHLPLGQEVNLAQ-LARRCAGFVVGDLYALLTHSSRAACT 238
Query: 913 R--NFPLQEILSAAAEKAFCS 931
R N L L+ E C+
Sbjct: 239 RIKNLGLAGGLTEEDEGELCA 259
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 395 (144.1 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 86/232 (37%), Positives = 132/232 (56%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F+ + GL + IR ++EV+ LPL PE F +G+ PP+GVLL+G PGTGKTL+ +A+ +
Sbjct: 180 FDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATI 239
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + KY+G++ R +R +F A++ +P IIF DE+D + R +
Sbjct: 240 GAN-----FIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEG 294
Query: 805 DQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ TL+ L MDG + G +I ATNRP+ +DPAL RPGR DR++ PLP+
Sbjct: 295 TSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNE 354
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK 912
R I +HT + K TG A + + GF GAD++ T+A A++
Sbjct: 355 AGRLEIFKIHTAKVKK--TGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIR 404
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 416 (151.5 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 97/266 (36%), Positives = 153/266 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV R ++E+V P+ +P+ F G+TP +GVL +G PG GKTL+ +A+ C
Sbjct: 474 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 533
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + KG + L + G++E +R +F A + P ++FFDE+D +A R
Sbjct: 534 QAN-----FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 588
Query: 805 DQTHSS---VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ V++ +L MDG+ ++ +V +IGATNRP+ +DPA+ RPGR D+ IY PLP
Sbjct: 589 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 648
Query: 862 EDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEI 920
+ R AIL + + PV + L ++A T GF+GADL +C +A +A++ + EI
Sbjct: 649 KSRVAILKANLRK--SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE-SEI 705
Query: 921 LSAAAEKAFCSKRVTLPS-FAVEERD 945
E+ +R T PS VEE D
Sbjct: 706 ---RRER----ERQTNPSAMEVEEDD 724
Score = 393 (143.4 bits), Expect = 2.0e-32, Sum P(2) = 2.0e-32
Identities = 100/272 (36%), Positives = 142/272 (52%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + G + + +KE+V LPL +P F +G+ PPRG+LL+G PGTGKTL+ RA+
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
+F G + + K G+ E R A + F D +T
Sbjct: 262 TGA-----FFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFPSPQTH- 315
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ +VS LL LMDGLK R V+V+ ATNRP ++DPALRR GRFDRE+ +P
Sbjct: 316 -GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 374
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL +HT+ K L+ +A T G GADL ALC++AA+ A+++ L ++
Sbjct: 375 RLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDL--- 430
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPP 955
E V + S AV D+ ALS S P
Sbjct: 431 --EDETIDAEV-MNSLAVTMDDFRWALSQSNP 459
Score = 46 (21.3 bits), Expect = 2.0e-32, Sum P(2) = 2.0e-32
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 1101 TASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN-VEIQKVDLATI 1145
T SKG VL G PG G+ LA + + N + I+ +L T+
Sbjct: 507 TPSKG----VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 548
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 417 (151.9 bits), Expect = 3.0e-35, P = 3.0e-35
Identities = 101/234 (43%), Positives = 139/234 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V GLQDV + + E + LPL +PE +LGL G+LLHG PGTGKTL+ +A+ C
Sbjct: 702 WHDVGGLQDVKKEILETIQLPLEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKAVATEC 759
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + + KG + + YVG +E +R +F A P IIFFDE+D LAP R R
Sbjct: 760 S-----LTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSG 814
Query: 805 DQ--THSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSME 862
D VVS LLA +DGL S V VIGATNRP+ +DPAL RPGRFD+ ++ + + E
Sbjct: 815 DSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVF--VGASE 872
Query: 863 DRAA---ILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
DRA+ +LS T ++ + SL+ + GADL +LC+ A + ALKR
Sbjct: 873 DRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKR 926
Score = 143 (55.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 59/200 (29%), Positives = 88/200 (44%)
Query: 717 LTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLL 776
LT VLL G PG+GKT V A +C+R + C E +L+
Sbjct: 460 LTGTSCVLLQGPPGSGKTTAVTA---ACSRLGLHLLKVPCSSL-CADSS-RTVETKLQTT 514
Query: 777 FQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGA 833
F A +C+P ++ +D L R R + VV+TL L+ D L ++V+
Sbjct: 515 FSRARRCRPVVLLLTALDLLG--RDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVAT 572
Query: 834 TNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAG 893
T+R + + +R F E+ P+ S R ++L T P +L + +A R AG
Sbjct: 573 TSRVQDLPTDVRTA--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQ-LARRCAG 629
Query: 894 FAGADLQALCTQAAIIALKR 913
F DL AL T A+ A R
Sbjct: 630 FVVGDLYALLTHASRAACTR 649
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 417 (151.9 bits), Expect = 3.0e-35, P = 3.0e-35
Identities = 101/234 (43%), Positives = 139/234 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V GLQDV + + E + LPL +PE +LGL G+LLHG PGTGKTL+ +A+ C
Sbjct: 702 WHDVGGLQDVKKEILETIQLPLEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKAVATEC 759
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + + KG + + YVG +E +R +F A P IIFFDE+D LAP R R
Sbjct: 760 S-----LTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSG 814
Query: 805 DQ--THSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSME 862
D VVS LLA +DGL S V VIGATNRP+ +DPAL RPGRFD+ ++ + + E
Sbjct: 815 DSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVF--VGASE 872
Query: 863 DRAA---ILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
DRA+ +LS T ++ + SL+ + GADL +LC+ A + ALKR
Sbjct: 873 DRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKR 926
Score = 143 (55.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 59/200 (29%), Positives = 88/200 (44%)
Query: 717 LTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLL 776
LT VLL G PG+GKT V A +C+R + C E +L+
Sbjct: 460 LTGTSCVLLQGPPGSGKTTAVTA---ACSRLGLHLLKVPCSSL-CADSS-RTVETKLQTT 514
Query: 777 FQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGA 833
F A +C+P ++ +D L R R + VV+TL L+ D L ++V+
Sbjct: 515 FSRARRCRPVVLLLTALDLLG--RDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVAT 572
Query: 834 TNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAG 893
T+R + + +R F E+ P+ S R ++L T P +L + +A R AG
Sbjct: 573 TSRVQDLPTDVRTA--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQ-LARRCAG 629
Query: 894 FAGADLQALCTQAAIIALKR 913
F DL AL T A+ A R
Sbjct: 630 FVVGDLYALLTHASRAACTR 649
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 380 (138.8 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 90/256 (35%), Positives = 143/256 (55%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL+ I+ +KE V LPL +PE ++ +G+ PP+GV+L+G PGTGKTL+ +A+
Sbjct: 188 ESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 247
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
+ R+ G++ + KY+GD R +R LF AE+ PSI+F DEID + R
Sbjct: 248 QTSATFLRVV-----GSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYD 302
Query: 803 QQDQTHSSVVSTLLALM---DGLK-SRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPL 858
Q + T+L L+ DG S+ + VI ATNR +DPAL RPGR DR+I F
Sbjct: 303 AQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFEN 362
Query: 859 PSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFP 916
P + I ++HT + +L + I + +GA+++A+ ++A ++AL+ R
Sbjct: 363 PDEATKRKIFTIHTSKMNLGEDVNLEELIQCKD-DLSGAEIKAIVSEAGLLALRERRMRV 421
Query: 917 LQEILSAAAEKAFCSK 932
+ + A EK +K
Sbjct: 422 VMDDFRQAREKVLKTK 437
Score = 40 (19.1 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 22 RLRKKHKRLDAICEEEYAKNHGEPNEDDDEAAE 54
++++ H L + EEEY +N D+ E
Sbjct: 71 KMQRIHDHL--LMEEEYVQNQERLKPQDERTQE 101
>FB|FBgn0035443 [details] [associations]
symbol:CG12010 species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
Length = 736
Score = 413 (150.4 bits), Expect = 3.5e-35, P = 3.5e-35
Identities = 103/289 (35%), Positives = 152/289 (52%)
Query: 661 RDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPP 720
+ L + P +D K+ GFE + G++ + R ++ V+ + F GL+ P
Sbjct: 444 KSLSQTQPSASRSTDVRVSKMTAGFEVIGGMEALKRTLQVSVLAGIRQSAAFARFGLSLP 503
Query: 721 RGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVA 780
+GVLL+G PG KT V + C + + + A A+ YVG AER + +F A
Sbjct: 504 KGVLLYGPPGCAKTTVAK-----CLAKEADMTFIATSAAEVYSPYVGCAERFISRIFDTA 558
Query: 781 EKCQPSIIFFDEIDGLAPCRTRQQD----QTHSSVVSTLLALMDGLKSRGS---VVVIGA 833
K P +IF DEID L RT Q ++STLL M+G+ GS ++V+ A
Sbjct: 559 RKNAPCLIFLDEIDSLVGRRTVSSGGGGGQVQLRILSTLLTEMNGIVGGGSQQHILVVAA 618
Query: 834 TNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAG 893
TNRP+ +D AL RPGRFD+ I+ P P + R A+L LH++R P L+ IAART
Sbjct: 619 TNRPDMIDDALLRPGRFDKLIHVPAPDEKSRLALLKLHSQRMPFH-ENVFLQEIAARTDR 677
Query: 894 FAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVE 942
++GADL LC +AAI A +R+F EI EK ++ +L ++
Sbjct: 678 YSGADLCNLCNEAAIEAFQRDFKATEIELQDFEKVLTKQKSSLTQSQID 726
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 392 (143.0 bits), Expect = 3.5e-35, P = 3.5e-35
Identities = 87/233 (37%), Positives = 135/233 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G ++ + ++EVV +PLL PE F LG+ PP+GVLL+G PGTGKTL RA+
Sbjct: 161 YNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIAN-- 218
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
R D + G++ + KYVG+ R +R LFQ+A+ + I+F DE+D + R +
Sbjct: 219 -RTDA--CFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDES 275
Query: 805 DQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
V T+L + +DG +RG++ V+ ATNRP+ +D AL RPGR DR I F LP +
Sbjct: 276 AHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDL 335
Query: 862 EDRAAILSLH--TERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
E R I +H T + V LL + + G +D++++CT+A + A++
Sbjct: 336 EGRTHIFKIHANTMNMSRDVRFELLARLCPNSTG---SDIRSVCTEAGMFAIR 385
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 392 (143.0 bits), Expect = 3.5e-35, P = 3.5e-35
Identities = 87/233 (37%), Positives = 135/233 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G ++ + ++EVV +PLL PE F LG+ PP+GVLL+G PGTGKTL RA+
Sbjct: 161 YNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIAN-- 218
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
R D + G++ + KYVG+ R +R LFQ+A+ + I+F DE+D + R +
Sbjct: 219 -RTDA--CFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDES 275
Query: 805 DQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
V T+L + +DG +RG++ V+ ATNRP+ +D AL RPGR DR I F LP +
Sbjct: 276 AHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDL 335
Query: 862 EDRAAILSLH--TERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK 912
E R I +H T + V LL + + G +D++++CT+A + A++
Sbjct: 336 EGRTHIFKIHANTMNMSRDVRFELLARLCPNSTG---SDIRSVCTEAGMFAIR 385
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 413 (150.4 bits), Expect = 4.1e-35, P = 4.1e-35
Identities = 95/228 (41%), Positives = 136/228 (59%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
+ GL + ++E++ LPL YP +LGL PRGVLL G PG GKT +VRA+ G
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARET--G 259
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKC---QPSIIFFDEIDGLAPCRTRQQ 804
+ +A A G G+ E +R +F+ A + +P+++F DE+D L P R
Sbjct: 260 AELLAVSAPA---LQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDALCPRRGGPH 316
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
S VV+ +L L+DG+ VVV+G+TNRP+A+DPALRRPGRFDRE+ P++ R
Sbjct: 317 QAPESRVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQR 376
Query: 865 AAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIAL 911
AIL + T + P ++G + L +A T G+ GADL ALC +AA+ AL
Sbjct: 377 KAILQVITSKMP--ISGQVDLNLLAEMTVGYVGADLTALCREAAMQAL 422
Score = 247 (92.0 bits), Expect = 2.8e-32, Sum P(2) = 2.8e-32
Identities = 56/141 (39%), Positives = 83/141 (58%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G+E + GL+DV +K+ + PL +P F +GLT P+GVLL+G PG KT +VRAL S
Sbjct: 464 GWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATS 523
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRT-- 801
C R ++ + GAD +VGD+E+ L +F+ A P+I+F DEID + R+
Sbjct: 524 C-----RCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEIDSILGSRSIS 578
Query: 802 RQQDQTHSSVVSTLLALMDGL 822
R + V+S LL +DG+
Sbjct: 579 RTECNVQDRVLSVLLNELDGV 599
Score = 197 (74.4 bits), Expect = 2.8e-32, Sum P(2) = 2.8e-32
Identities = 47/114 (41%), Positives = 67/114 (58%)
Query: 827 SVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKW 886
+V+V+ ATNRP+ +D AL RPGR D+ IY P P + R +IL + T+ P SL K
Sbjct: 635 NVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEK- 693
Query: 887 IAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFA 940
+AA T F+GADL LC +AA++AL+ N E+ + E S + PS +
Sbjct: 694 VAAETCFFSGADLGNLCKEAALLALQENG--LEVTTVKQEHFLESLKTVKPSLS 745
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 406 (148.0 bits), Expect = 5.7e-35, P = 5.7e-35
Identities = 97/264 (36%), Positives = 145/264 (54%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
++ V GL+D+ + +++ V P+ + F +G++P RG+LLHG PG KT + +A
Sbjct: 285 WDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKA----- 339
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
A + ++F+ A+ YVG+ E LR FQ A PSIIFFDE D +A C+ +
Sbjct: 340 AANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVA-CKRGDE 398
Query: 805 DQTHSSVV-----STLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
++SS V STLL MDGL+ ++V+ ATNRP A+D AL RPGRFD +Y P P
Sbjct: 399 SSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPP 458
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQE 919
+E R IL +HT L K IA T F GA+L+ LC ++ ++L+ N
Sbjct: 459 DLEARFEILQVHTRNMTLGDDVDLRK-IAEETDLFTGAELEGLCRESGTVSLRENIAATA 517
Query: 920 ILSAAAEKAFCSKRVTLPSFAVEE 943
+ + + A S + P+ +EE
Sbjct: 518 VFNRHFQTAKSSLK---PALTIEE 538
Score = 365 (133.5 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 92/234 (39%), Positives = 132/234 (56%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
+ G + ++ ++E++I P YP LGL PRG+LL+G PGTGKT +VRA++ C
Sbjct: 24 IGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQEC--- 80
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKC----QPSIIFFDEIDGLAPCRTRQ 803
D + + + G++E+ LR F A +PS+IF DEID L P R +
Sbjct: 81 DAHLIVLSPHSVH--RAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDAR 138
Query: 804 QDQTHSSVVSTLLALMDGLKSRGS---VVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
++Q + S L LMD K S VVV+ +TNR +A+DPALRR GRFD + P+
Sbjct: 139 REQD-VRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPN 197
Query: 861 MEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRN 914
EDR IL L+T++ + L + IA G+ GADL+ALC +A I A KR+
Sbjct: 198 EEDRLKILQLYTKKVNLDPSVDL-QAIAISCNGYVGADLEALCREATISASKRS 250
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 414 (150.8 bits), Expect = 6.4e-35, P = 6.4e-35
Identities = 101/234 (43%), Positives = 138/234 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V GLQDV + + E + LPL +PE +LGL G+LLHG PGTGKTL+ +A+ C
Sbjct: 705 WHDVGGLQDVKKEILETIQLPLEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKAVATEC 762
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + + KG + + YVG +E +R +F A P IIFFDE+D LAP R R
Sbjct: 763 S-----LTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSG 817
Query: 805 DQ--THSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSME 862
D VVS LLA +DGL S V VIGATNRP+ +DPAL RPGRFD+ ++ + + E
Sbjct: 818 DSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVF--VGASE 875
Query: 863 DRAA---ILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
DRA+ +LS T ++ + SL + GADL +LC+ A + ALKR
Sbjct: 876 DRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKR 929
Score = 135 (52.6 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 57/200 (28%), Positives = 86/200 (43%)
Query: 717 LTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLL 776
LT VLL G PG+GKT V A +C+R + C E +L+
Sbjct: 461 LTGTSCVLLQGPPGSGKTTAVTA---ACSRLGLHLLKVPCSSL-CADSSRA-VETKLQAT 515
Query: 777 FQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGA 833
F A +C+P+++ +D L R R + V +TL L+ D L ++V+
Sbjct: 516 FSRARRCRPAVLLLTAVDLLG--RDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVAT 573
Query: 834 TNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAG 893
T+R + + ++ F E+ P+ S R +IL T P +L + +A R AG
Sbjct: 574 TSRVQDLPTDVQTA--FPHELEVPVLSEAQRLSILQALTAHLPLGQEVNLPQ-LARRCAG 630
Query: 894 FAGADLQALCTQAAIIALKR 913
F DL AL T A R
Sbjct: 631 FVVGDLYALLTHTCRAACTR 650
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 389 (142.0 bits), Expect = 7.3e-35, P = 7.3e-35
Identities = 118/376 (31%), Positives = 190/376 (50%)
Query: 583 IFDHRKFLIACTDHRHLFQPYGDQYLARIKKLKARKMKMEI-----RKLSNDAWRKDMEA 637
+ +HRK+ D R + Y +KA + +I ++L ++ + +
Sbjct: 55 LLEHRKWDARLKDLRLSIRDLDKDYEKTENDIKALQSVGQIIGEVLKQLDDERYIVKTSS 114
Query: 638 EEKWLENCGED--EEFLKREGKRLHRDL-----LRIAP------VYIGGSDSDSGKLFEG 684
+++ C +E LK G R+ D+ +RI P VY + + G++
Sbjct: 115 GPRYIVGCRNTIKKENLKN-GVRVSLDMTTLTIMRILPREVDPLVY-NMTTFEPGEI--S 170
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F + GL + IR ++EV+ LPL PE F +G+ PP+GVLL+G PGTGKTL+ +A+ +
Sbjct: 171 FNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATI 230
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
G I F+ A + KY+G++ R +R +F A++ +P IIF DE+D + R +
Sbjct: 231 --GANFI--FSPASA-IVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEG 285
Query: 805 DQTHSSVVSTLLAL---MDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+ TL+ L MDG + G +I ATNRP+ +DPAL R GR DR+I LP+
Sbjct: 286 TSADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNE 345
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTA-GFAGADLQALCTQAAIIALK--RNFPLQ 918
R I +HT + K G A + + GF GAD++ + T+A A++ R++ LQ
Sbjct: 346 AGRLEIFKIHTSKVAKQ--GEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQ 403
Query: 919 EILSAAAEKAFCSKRV 934
L A K K++
Sbjct: 404 NDLMKAVRKVADVKKL 419
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 389 (142.0 bits), Expect = 7.3e-35, P = 7.3e-35
Identities = 88/234 (37%), Positives = 135/234 (57%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ + E V+LP+ + E F+++G+ PP+GVL++G PGTGKTL+ RA
Sbjct: 165 EEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARA--- 221
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA Y G + ++GD + +R F +A++ P+IIF DE+D + R
Sbjct: 222 -CA-AQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFD 279
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG S ++ VI ATNR + +DPAL R GR DR+I FPLP
Sbjct: 280 SEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLP 339
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA IL +H+ + + + +A + F GA L+A+C +A +IAL+R
Sbjct: 340 NEEARAHILQIHSRKMNVSADVNFDE-LARSSEDFNGAQLKAVCVEAGMIALRR 392
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 359 (131.4 bits), Expect = 9.2e-35, Sum P(2) = 9.2e-35
Identities = 90/277 (32%), Positives = 145/277 (52%)
Query: 648 DEEFLKREGK-RLHRDLLRIAPVYIGGSDSDSGKLFEGFESVAGLQDVIRC------MKE 700
+ E LK LHR + V +DS L + + D+ C ++E
Sbjct: 110 NRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIRE 169
Query: 701 VVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGAD 760
V LPL + E + +G+ PPRGVLL+G PGTGKT++ +A+ R+ G++
Sbjct: 170 AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVV-----GSE 224
Query: 761 CLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ---DQTHSSVVSTLLA 817
+ KY+G+ R +R +F++A++ P+IIF DE+D +A R Q D+ ++ LL
Sbjct: 225 FVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLN 284
Query: 818 LMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPK 877
MDG +V VI ATNR + +DPAL RPGR DR+I FPLP + + + T +
Sbjct: 285 QMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNL 344
Query: 878 PVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRN 914
L +++ R + A++ A+C +A + A+++N
Sbjct: 345 SDEVDLEDYVS-RPDKISAAEIAAICQEAGMHAVRKN 380
Score = 57 (25.1 bits), Expect = 9.2e-35, Sum P(2) = 9.2e-35
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 615 KARKMKMEIRKLSNDAWRKDMEAEEKWLENCGEDEEFLKREGKRLHRDLLR 665
KA M++ + +++ E+ LE EE++K E K L R+LLR
Sbjct: 14 KASPALMDLSTADEEDLYGRLKSLERQLEFTDIQEEYVKDEQKNLKRELLR 64
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 388 (141.6 bits), Expect = 9.3e-35, P = 9.3e-35
Identities = 90/235 (38%), Positives = 136/235 (57%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ + E ++LP+ + E F+NLG+ PP+GVL++G PGTGKTL+ RA
Sbjct: 148 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA--- 204
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA K + G + ++GD + +R F +A++ PSIIF DE+D + R
Sbjct: 205 -CAAQTKA-TFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFD 262
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + V VI ATNR + +DPAL R GR DR+I FP+P
Sbjct: 263 SEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 322
Query: 860 SMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA I+ +H+ + V+ + + +A T F GA +A+C +A IIAL+R
Sbjct: 323 NEEARARIMQIHSRKMN--VSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRR 375
>UNIPROTKB|Q9UN37 [details] [associations]
symbol:VPS4A "Vacuolar protein sorting-associated protein
4A" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016192 "vesicle-mediated transport" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0016197 "endosomal transport"
evidence=IMP;TAS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0042623 "ATPase activity, coupled" evidence=NAS]
[GO:0000910 "cytokinesis" evidence=IDA] [GO:0030496 "midbody"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000815 "ESCRT III complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] Reactome:REACT_11123 InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0048471 GO:GO:0016192 GO:GO:0031902
GO:GO:0015031 GO:GO:0016197 GO:GO:0007049 GO:GO:0000910
Pfam:PF04212 eggNOG:COG0464 GO:GO:0030496 EMBL:CH471092
InterPro:IPR015415 Pfam:PF09336 GO:GO:0016044 HOVERGEN:HBG057074
GO:GO:0042623 SMART:SM00745 PDB:2JQ9 PDBsum:2JQ9 PDB:2K3W
PDBsum:2K3W HOGENOM:HOG000225146 EMBL:AF255952 EMBL:AF282903
EMBL:AF132747 EMBL:AF159063 EMBL:AF112215 EMBL:AK315026
EMBL:BC047932 EMBL:AF155740 IPI:IPI00411356 RefSeq:NP_037377.1
UniGene:Hs.128420 PDB:1YXR PDBsum:1YXR ProteinModelPortal:Q9UN37
SMR:Q9UN37 IntAct:Q9UN37 STRING:Q9UN37 PhosphoSite:Q9UN37
DMDM:62511240 PaxDb:Q9UN37 PRIDE:Q9UN37 DNASU:27183
Ensembl:ENST00000254950 GeneID:27183 KEGG:hsa:27183 UCSC:uc002eww.3
CTD:27183 GeneCards:GC16P069335 HGNC:HGNC:13488 HPA:CAB018751
MIM:609982 neXtProt:NX_Q9UN37 PharmGKB:PA38362 InParanoid:Q9UN37
KO:K12196 OMA:FTGKRIP OrthoDB:EOG4G1MGD ChiTaRS:VPS4A
EvolutionaryTrace:Q9UN37 GenomeRNAi:27183 NextBio:50017
ArrayExpress:Q9UN37 Bgee:Q9UN37 CleanEx:HS_VPS4A
Genevestigator:Q9UN37 GermOnline:ENSG00000132612 Uniprot:Q9UN37
Length = 437
Score = 369 (135.0 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 89/271 (32%), Positives = 145/271 (53%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ VAGL+ +KE VILP+ +P F TP RG+LL G PGTGK+ + +A+
Sbjct: 126 WNDVAGLEGAKEALKEAVILPIKFPHLFTGKR-TPWRGILLFGPPGTGKSYLAKAV---- 180
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
A +F+ +D + K++G++E+ ++ LF++A + +PSIIF DE+D L R +
Sbjct: 181 ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE 240
Query: 805 DQTHSSVVSTLLALMDGL-KSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ + + L M G+ + +V+GATN P +D A+RR RF++ IY PLP
Sbjct: 241 SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAA 298
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
RA + LH P +T + + +A +T G++GAD+ + + + P++++ SA
Sbjct: 299 RAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQ------PVRKVQSA 352
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSP 954
K C T PS ++ D L CSP
Sbjct: 353 THFKKVCGPSRTNPSMMID--DLLTP--CSP 379
Score = 46 (21.3 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 22/85 (25%), Positives = 33/85 (38%)
Query: 84 VKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFGAKSDES 143
+K DK +K + R+ K KD +S G + ++ G G+ SD
Sbjct: 43 IKYEAHSDKAKESIRAKCVQYLDRAEKLKDYLRSKEKH--GKKPVKENQSEGKGSDSDSE 100
Query: 144 GHLSRRRKLFREMDEDAESEVGMEK 168
G ++KL E V MEK
Sbjct: 101 GDNPEKKKL----QEQLMGAVVMEK 121
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 387 (141.3 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 96/248 (38%), Positives = 142/248 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL I+ +KEV+ LP+ +PE F+ LG+ P+GVLL+G PGTGKTL+ RA+
Sbjct: 143 YEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAV---A 199
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
D + G++ + K++G+ R +R LF +A + PSIIF DEID + R
Sbjct: 200 HHTD--CTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS-RLEGG 256
Query: 805 DQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
S V T+L L+ DG ++ ++ VI ATNR + +D AL RPGR DR+I FP P+
Sbjct: 257 SGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 316
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALK--RNFPLQE 919
E R IL +H+ + G L+ IA G +GA+++ +CT+A + AL+ R QE
Sbjct: 317 EARLDILKIHSRKM-NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 375
Query: 920 ILSAAAEK 927
A K
Sbjct: 376 DFEMAVAK 383
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 419 (152.6 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 99/235 (42%), Positives = 138/235 (58%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G ++ GL + ++E++ LPL YP LGL PRGVLL G PG GKT +VRA+
Sbjct: 191 GEVTLGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQLVRAVARE 250
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQ---PSIIFFDEIDGLAPCR 800
G + +A A G G+ E +R +FQ A++ PS++F DE+D L P R
Sbjct: 251 A--GAELLAVSAPA---LQGTRPGETEENVRRVFQRAQELASRGPSLLFLDEVDALCPRR 305
Query: 801 TRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPS 860
Q S VV+ +L L+DG+ VVV+GATNRP+ +DPALRRPGRFDRE+ P+
Sbjct: 306 GGPQRAPESRVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVIIGTPT 365
Query: 861 MEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRN 914
++ R AIL + T + P ++ + L +A T G+ GADL ALC +AA AL +N
Sbjct: 366 LKQREAILGVITSKMP--ISSHIDLGLLAEMTVGYVGADLTALCREAATCALLKN 418
Score = 383 (139.9 bits), Expect = 7.3e-32, P = 7.3e-32
Identities = 96/252 (38%), Positives = 141/252 (55%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G+E + GL+DV +K+ V PL +P+ F +GLT P+G+LL+G PG KT +VRAL S
Sbjct: 457 GWEQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGLLLYGPPGCAKTTLVRALATS 516
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
C ++ + GAD +VGD+E+ L +F+ A P+++F DEID + R+
Sbjct: 517 C-----HCSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALVFLDEIDSVLGSRSVG 571
Query: 804 QD--QTHSSVVSTLLALMDGL-----KSRGS--------------VVVIGATNRPEAVDP 842
V+S LL +DG+ + RGS V+++ ATNRP+ +D
Sbjct: 572 SSGCDARERVLSVLLNELDGVGVRTVERRGSKASQQECQEILSRSVMIVVATNRPDVLDD 631
Query: 843 ALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQAL 902
AL RPGR D+ +Y P P E R +IL + T P + SL +AA T F+GADL+ L
Sbjct: 632 ALLRPGRLDKMVYVPPPDREGRLSILKVCTNNMPIGLNVSLEN-LAAETCYFSGADLRNL 690
Query: 903 CTQAAIIALKRN 914
C +AA+ AL+ N
Sbjct: 691 CKEAALFALQEN 702
Score = 37 (18.1 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 941 VEERDWLEALSCSPPPCSKREAGI 964
+EE D+LEA P + G+
Sbjct: 427 IEETDFLEAFKKVQPSSFRSSIGL 450
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 386 (140.9 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 89/235 (37%), Positives = 136/235 (57%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ + E ++LP+ + E F+NLG+ PP+GVL++G PGTGKTL+ RA
Sbjct: 129 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA--- 185
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA K + G + ++GD + +R F +A++ PSIIF DE+D + R
Sbjct: 186 -CAAQTKA-TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 243
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + V VI ATNR + +DPAL R GR DR+I FP+P
Sbjct: 244 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 303
Query: 860 SMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA I+ +H+ + V+ + + +A T F GA +A+C +A +IAL+R
Sbjct: 304 NEEARARIMQIHSRKMN--VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 356
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 386 (140.9 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 89/235 (37%), Positives = 136/235 (57%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ + E ++LP+ + E F+NLG+ PP+GVL++G PGTGKTL+ RA
Sbjct: 133 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA--- 189
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA K + G + ++GD + +R F +A++ PSIIF DE+D + R
Sbjct: 190 -CAAQTKA-TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 247
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + V VI ATNR + +DPAL R GR DR+I FP+P
Sbjct: 248 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 307
Query: 860 SMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA I+ +H+ + V+ + + +A T F GA +A+C +A +IAL+R
Sbjct: 308 NEEARARIMQIHSRKMN--VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 360
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 386 (140.9 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 89/235 (37%), Positives = 136/235 (57%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ + E ++LP+ + E F+NLG+ PP+GVL++G PGTGKTL+ RA
Sbjct: 183 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA--- 239
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA K + G + ++GD + +R F +A++ PSIIF DE+D + R
Sbjct: 240 -CAAQTKA-TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 297
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + V VI ATNR + +DPAL R GR DR+I FP+P
Sbjct: 298 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 357
Query: 860 SMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA I+ +H+ + V+ + + +A T F GA +A+C +A +IAL+R
Sbjct: 358 NEEARARIMQIHSRKMN--VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 410
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 386 (140.9 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 89/235 (37%), Positives = 136/235 (57%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ + E ++LP+ + E F+NLG+ PP+GVL++G PGTGKTL+ RA
Sbjct: 141 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA--- 197
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA K + G + ++GD + +R F +A++ PSIIF DE+D + R
Sbjct: 198 -CAAQTKA-TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 255
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + V VI ATNR + +DPAL R GR DR+I FP+P
Sbjct: 256 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 315
Query: 860 SMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA I+ +H+ + V+ + + +A T F GA +A+C +A +IAL+R
Sbjct: 316 NEEARARIMQIHSRKMN--VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 368
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 386 (140.9 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 89/235 (37%), Positives = 136/235 (57%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ + E ++LP+ + E F+NLG+ PP+GVL++G PGTGKTL+ RA
Sbjct: 183 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA--- 239
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA K + G + ++GD + +R F +A++ PSIIF DE+D + R
Sbjct: 240 -CAAQTKA-TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 297
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + V VI ATNR + +DPAL R GR DR+I FP+P
Sbjct: 298 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 357
Query: 860 SMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA I+ +H+ + V+ + + +A T F GA +A+C +A +IAL+R
Sbjct: 358 NEEARARIMQIHSRKMN--VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 410
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 386 (140.9 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 89/235 (37%), Positives = 136/235 (57%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ + E ++LP+ + E F+NLG+ PP+GVL++G PGTGKTL+ RA
Sbjct: 190 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA--- 246
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA K + G + ++GD + +R F +A++ PSIIF DE+D + R
Sbjct: 247 -CAAQTKA-TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 304
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + V VI ATNR + +DPAL R GR DR+I FP+P
Sbjct: 305 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 364
Query: 860 SMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA I+ +H+ + V+ + + +A T F GA +A+C +A +IAL+R
Sbjct: 365 NEEARARIMQIHSRKMN--VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 417
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 386 (140.9 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 89/235 (37%), Positives = 136/235 (57%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ + E ++LP+ + E F+NLG+ PP+GVL++G PGTGKTL+ RA
Sbjct: 186 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA--- 242
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA K + G + ++GD + +R F +A++ PSIIF DE+D + R
Sbjct: 243 -CAAQTKA-TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 300
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + V VI ATNR + +DPAL R GR DR+I FP+P
Sbjct: 301 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 360
Query: 860 SMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA I+ +H+ + V+ + + +A T F GA +A+C +A +IAL+R
Sbjct: 361 NEEARARIMQIHSRKMN--VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 413
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 386 (140.9 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 89/235 (37%), Positives = 136/235 (57%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ + E ++LP+ + E F+NLG+ PP+GVL++G PGTGKTL+ RA
Sbjct: 183 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA--- 239
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA K + G + ++GD + +R F +A++ PSIIF DE+D + R
Sbjct: 240 -CAAQTKA-TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 297
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + V VI ATNR + +DPAL R GR DR+I FP+P
Sbjct: 298 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 357
Query: 860 SMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA I+ +H+ + V+ + + +A T F GA +A+C +A +IAL+R
Sbjct: 358 NEEARARIMQIHSRKMN--VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 410
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 386 (140.9 bits), Expect = 1.5e-34, P = 1.5e-34
Identities = 89/235 (37%), Positives = 136/235 (57%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ + E ++LP+ + E F+NLG+ PP+GVL++G PGTGKTL+ RA
Sbjct: 186 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA--- 242
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA K + G + ++GD + +R F +A++ PSIIF DE+D + R
Sbjct: 243 -CAAQTKA-TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 300
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + V VI ATNR + +DPAL R GR DR+I FP+P
Sbjct: 301 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 360
Query: 860 SMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA I+ +H+ + V+ + + +A T F GA +A+C +A +IAL+R
Sbjct: 361 NEEARARIMQIHSRKMN--VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 413
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 406 (148.0 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 85/231 (36%), Positives = 138/231 (59%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G +++ +++ VI P +PE F+ G+ PP G+LL+G PG KTL+ RAL
Sbjct: 458 WNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARALAS-- 515
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ ++ + A KG + K+VGD+E+ +R LF A + P+I+FFDEID + R ++
Sbjct: 516 ---EAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSEK 572
Query: 805 DQTHSS-VVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
S V++ LL +DGL+ V+++ ATNRP+ +D AL RPGR DR IY LP
Sbjct: 573 SSGVSDRVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLPCEVT 632
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRN 914
R AIL + T++ T + + +T+G++GA+L A+C AA+ A++ +
Sbjct: 633 RRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAMFAMRES 683
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 385 (140.6 bits), Expect = 2.0e-34, P = 2.0e-34
Identities = 88/236 (37%), Positives = 133/236 (56%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL+ I+ + E ++LP+ + E F+ LG+ PP+GVLL+G PGTGKTL+ RA
Sbjct: 167 EDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARA--- 223
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA + G + ++GD + +R F +A++ P IIF DEID + R
Sbjct: 224 -CA-AQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFD 281
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG S + VI ATNR + +DPAL R GR DR+I FP P
Sbjct: 282 SEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHP 341
Query: 860 SMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKRN 914
+ E R IL +H+ + V + + +A T F GA L+A+C +A ++AL+R+
Sbjct: 342 TEEARGRILQIHSRKMN--VNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 385 (140.6 bits), Expect = 2.0e-34, P = 2.0e-34
Identities = 88/234 (37%), Positives = 133/234 (56%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ + E ++LP+ + E F+NLG+ PP+GVL++G PGTGKTL+ RA
Sbjct: 171 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA--- 227
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA K + G + ++GD + +R F +A++ PSIIF DE+D + R
Sbjct: 228 -CAAQTKA-TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFD 285
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + V VI ATNR + +DPAL R GR DR+I FP+P
Sbjct: 286 SEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP 345
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA I+ +H+ + + +A T F GA +A+C +A +IAL+R
Sbjct: 346 NEEARARIMQIHSRKM-NVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRR 398
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 413 (150.4 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 95/234 (40%), Positives = 137/234 (58%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
+ L+DV + ++ P+ PE F LGLT P GVLL G PG GKTL+ +A+
Sbjct: 583 IGALEDVREELTMAILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVAN----- 637
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQT 807
+ + + + KG + L YVG++ER +R +FQ A P +IFFDE+D L P R+ ++
Sbjct: 638 ESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDRESGA 697
Query: 808 HSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAI 867
VV+ LL MDGL++R V ++ ATNRP+ +DPA+ RPGR D+ +Y LP EDR AI
Sbjct: 698 SVRVVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAI 757
Query: 868 LSLHTERWPKPV--TGSLLKWIA--ARTAGFAGADLQALCTQAAIIALKRNFPL 917
L T+ +P T L+ IA + + GADL AL +A+I AL++ L
Sbjct: 758 LKTITKDGTRPPLDTDVNLEEIAYSQQCDCYTGADLSALVREASICALRQEMAL 811
Score = 373 (136.4 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 102/294 (34%), Positives = 154/294 (52%)
Query: 633 KDMEAEEKWLENCGEDEEFLKREGKRLHR-----DL-LRIAPVYIGGSDSDSG-KLFEG- 684
K + +E+K E + E K +GKR R D+ I + + G G +L+
Sbjct: 197 KKLISEQKSTEFSVLESEKKKTKGKRAKRKKEFPDVDEEIESILLKGKVKSKGPELYHPS 256
Query: 685 --FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
FE V G + ++ + +++I + +PE + +LG+ PPRG LLHG PG GKTL+ +A+ G
Sbjct: 257 VKFEDVGGNDETLKEICKMLI-HVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIAG 315
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
++A + + G++E++LR LF A P ++F DEID + P R
Sbjct: 316 ELELPMLKVA-----ATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKREV 370
Query: 803 QQDQTHSSVVSTLLALMDGLKS---RGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+V+ LL +D L + V+VIGATNRP+++DPALRR GRFDREI +P
Sbjct: 371 ASKDMERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIP 430
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
R IL + P + L +A T G+ GADL ALC +AA+ + R
Sbjct: 431 DEAAREKILQTLCRKLKLPGSFDFLH-LAHLTPGYVGADLMALCREAAMCTVNR 483
Score = 51 (23.0 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 34/124 (27%), Positives = 55/124 (44%)
Query: 60 RNLELRRSSRVRRAPVLLDVSP-SPVKKRRK-----MDKTVNLYVSKSLNSSRRSAKEKD 113
+N + S+ V+ AP +SP S V+ R +DKT + K E D
Sbjct: 139 KNEPMETSTPVQTAPQTSTLSPASQVETRISKGGWFIDKTPS---GKDFFIDLSEDGEGD 195
Query: 114 NEKSVSPGVWGSRLRSRGRNVGFGAKSDESGHLSRRRKLFREMDEDAESEV--GMEKGSE 171
+K +S +S +V K G ++R+K F ++DE+ ES + G K S+
Sbjct: 196 EKKLIS------EQKSTEFSVLESEKKKTKGKRAKRKKEFPDVDEEIESILLKGKVK-SK 248
Query: 172 GGDL 175
G +L
Sbjct: 249 GPEL 252
Score = 39 (18.8 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 526 PEVYFAGLGCLKNIRAAL 543
P+V +A +G L+++R L
Sbjct: 576 PDVTWADIGALEDVREEL 593
Score = 39 (18.8 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 1110 VLISGSPGSGQRHLA 1124
VL++G PG G+ LA
Sbjct: 618 VLLAGPPGCGKTLLA 632
Score = 38 (18.4 bits), Expect = 4.4e-33, Sum P(3) = 4.4e-33
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 220 ESGRGEELEVVRNEREDSKTIPES----VVGNEGEDSKMIPESVLGVENV 265
E G G+E +++ ++ ++ ES G + K P+ +E++
Sbjct: 190 EDGEGDEKKLISEQKSTEFSVLESEKKKTKGKRAKRKKEFPDVDEEIESI 239
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 413 (150.4 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 100/244 (40%), Positives = 140/244 (57%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
V LQDV + ++ P+ PE F LGL+ P G+LL G PG GKTL+ +A+ A G
Sbjct: 522 VGALQDVREELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVAN--ASG 579
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQT 807
+ + + KG + L YVG++ER +R +FQ P +IFFDEID L P R+ +
Sbjct: 580 ---LNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSEHESGA 636
Query: 808 HSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAI 867
VV+ LL MDG+++R V ++ ATNRP+ +DPA+ RPGR D+ +Y LP DR AI
Sbjct: 637 SVRVVNQLLTEMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADRHAI 696
Query: 868 LSLHTERWPKPVTGS--LLKWIA--ARTAGFAGADLQALCTQAAIIALKRNF-PLQEILS 922
L+ T+ KP S L+ IA AR F GADL AL +A + AL+ + P Q
Sbjct: 697 LNTITKGGTKPQLDSDVSLEEIAHDARCETFTGADLSALVREACVNALRVHLDPAQTHTE 756
Query: 923 AAAE 926
+A +
Sbjct: 757 SAKD 760
Score = 372 (136.0 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 90/232 (38%), Positives = 128/232 (55%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
FE G + + + +++I + +PE + LG+ PPRG LLHG PG GKTL+ +A+ G
Sbjct: 226 FEDFGGSDETLEEVCKLLI-HMRHPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVAGET 284
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
A +I+ + + G++E++LR LF+ A P I+F DEID + P R
Sbjct: 285 ALPLLKIS-----APELVSGVSGESEQKLRELFEQAISSAPCILFIDEIDAITPKRETAS 339
Query: 805 DQTHSSVVSTLLALMDGLKSR---GSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
+V+ LL MD L S V+VIGATNRP+++DPALRR GRFDREI +P
Sbjct: 340 KDMERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 399
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
R IL + P + +A T G+ GADL ALC +AA+ A+ R
Sbjct: 400 GARMKILKTLCRKIRLPDDFDF-RHLARLTPGYVGADLMALCREAAMNAVNR 450
Score = 49 (22.3 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 386 GGEHVRISTSEVKDGSSDHQKDDFLAMLEEKPVECENAPKVDAFNPGSDSTLGWPRIK 443
G E + I E + S+ +Q+D E+K V+ + K + S+++ G P K
Sbjct: 155 GQESILIDLCEEESSSTTNQRDSSRLEKEKKSVK-QKRQKKNKLEEDSETSAGVPAKK 211
Score = 40 (19.1 bits), Expect = 9.9e-29, Sum P(3) = 9.9e-29
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 385 DG-GEHVRISTSEVKDGSSDHQ 405
DG G HV S+++ +D +H+
Sbjct: 91 DGDGSHVTASSTDSEDDIPEHE 112
Score = 40 (19.1 bits), Expect = 9.9e-29, Sum P(3) = 9.9e-29
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 100 KSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFGA-KSDESG 144
KS+ R+ + + + S GV + + +G + F + K ++ G
Sbjct: 185 KSVKQKRQKKNKLEEDSETSAGVPAKKSKVKGFELQFSSVKFEDFG 230
Score = 38 (18.4 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 526 PEVYFAGLGCLKNIRAAL 543
P+V +A +G L+++R L
Sbjct: 515 PDVTWADVGALQDVREEL 532
Score = 37 (18.1 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 1110 VLISGSPGSGQRHLAACLLHS 1130
+L++G PG G+ LA + ++
Sbjct: 557 LLLAGPPGCGKTLLAKAVANA 577
Score = 37 (18.1 bits), Expect = 2.0e-28, Sum P(3) = 2.0e-28
Identities = 6/25 (24%), Positives = 16/25 (64%)
Query: 142 ESGHLSRRRKLFREMDEDAESEVGM 166
E + ++R+ +++ED+E+ G+
Sbjct: 183 EKKSVKQKRQKKNKLEEDSETSAGV 207
>MGI|MGI:1890520 [details] [associations]
symbol:Vps4a "vacuolar protein sorting 4a (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017048 "Rho GTPase binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030496
"midbody" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO;IDA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1890520 GO:GO:0005524 GO:GO:0048471
GO:GO:0051301 GO:GO:0016192 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
CTD:27183 KO:K12196 OrthoDB:EOG4G1MGD EMBL:AF530161 EMBL:AK047821
EMBL:AK159117 EMBL:BC018368 IPI:IPI00312172 RefSeq:NP_569053.1
UniGene:Mm.236004 ProteinModelPortal:Q8VEJ9 SMR:Q8VEJ9
STRING:Q8VEJ9 PhosphoSite:Q8VEJ9 PaxDb:Q8VEJ9 PRIDE:Q8VEJ9
Ensembl:ENSMUST00000034388 GeneID:116733 KEGG:mmu:116733
UCSC:uc009ngv.1 InParanoid:Q8VEJ9 OMA:VRWNDVA NextBio:369058
Bgee:Q8VEJ9 CleanEx:MM_VPS4A Genevestigator:Q8VEJ9
GermOnline:ENSMUSG00000031913 Uniprot:Q8VEJ9
Length = 437
Score = 368 (134.6 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 89/271 (32%), Positives = 145/271 (53%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ VAGL+ +KE VILP+ +P F TP RG+LL G PGTGK+ + +A+
Sbjct: 126 WNDVAGLEGAKEALKEAVILPIKFPHLFTGKR-TPWRGILLFGPPGTGKSYLAKAV---- 180
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
A +F+ +D + K++G++E+ ++ LF++A + +PSIIF DE+D L R +
Sbjct: 181 ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE 240
Query: 805 DQTHSSVVSTLLALMDGL-KSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ + + L M G+ + +V+GATN P +D A+RR RF++ IY PLP
Sbjct: 241 SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAA 298
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
RA + LH P +T + + +A +T G++GAD+ + + + P++++ SA
Sbjct: 299 RAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQ------PVRKVQSA 352
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSP 954
K C T PS ++ D L CSP
Sbjct: 353 THFKKVCGPSRTNPSVMID--DLLTP--CSP 379
Score = 44 (20.5 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 21/85 (24%), Positives = 33/85 (38%)
Query: 84 VKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFGAKSDES 143
+K DK +K + R+ K KD ++ G + ++ G G+ SD
Sbjct: 43 IKYEAHSDKAKESIRAKCMQYLDRAEKLKDYLRNKEKH--GKKPVKENQSEGKGSDSDSE 100
Query: 144 GHLSRRRKLFREMDEDAESEVGMEK 168
G ++KL E V MEK
Sbjct: 101 GDNPEKKKL----QEQLMGAVVMEK 121
Score = 40 (19.1 bits), Expect = 6.1e-34, Sum P(2) = 6.1e-34
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 134 VGFGAKSDESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDLVVSKAEKLDRFKELNDLG 193
+ + A SD++ S R K + +D + + + + G V + + + + + G
Sbjct: 43 IKYEAHSDKAKE-SIRAKCMQYLDRAEKLKDYLRNKEKHGKKPVKENQSEGKGSDSDSEG 101
Query: 194 DEPEK 198
D PEK
Sbjct: 102 DNPEK 106
>RGD|628810 [details] [associations]
symbol:Vps4a "vacuolar protein sorting 4 homolog A (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000910
"cytokinesis" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISO] [GO:0016197 "endosomal transport" evidence=IC;ISO]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030496
"midbody" evidence=ISO] [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0000815 "ESCRT III complex" evidence=ISO] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:628810 GO:GO:0005524
GO:GO:0051301 GO:GO:0031902 GO:GO:0015031 GO:GO:0016197
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 HSSP:O75351
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
CTD:27183 KO:K12196 OrthoDB:EOG4G1MGD EMBL:AB076398 IPI:IPI00204016
RefSeq:NP_663711.1 UniGene:Rn.12477 ProteinModelPortal:Q793F9
SMR:Q793F9 STRING:Q793F9 PhosphoSite:Q793F9 PRIDE:Q793F9
Ensembl:ENSRNOT00000027607 GeneID:246772 KEGG:rno:246772
UCSC:RGD:628810 NextBio:623855 ArrayExpress:Q793F9
Genevestigator:Q793F9 Uniprot:Q793F9
Length = 437
Score = 368 (134.6 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 89/271 (32%), Positives = 145/271 (53%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ VAGL+ +KE VILP+ +P F TP RG+LL G PGTGK+ + +A+
Sbjct: 126 WNDVAGLEGAKEALKEAVILPIKFPHLFTGKR-TPWRGILLFGPPGTGKSYLAKAV---- 180
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
A +F+ +D + K++G++E+ ++ LF++A + +PSIIF DE+D L R +
Sbjct: 181 ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE 240
Query: 805 DQTHSSVVSTLLALMDGL-KSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ + + L M G+ + +V+GATN P +D A+RR RF++ IY PLP
Sbjct: 241 SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAA 298
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
RA + LH P +T + + +A +T G++GAD+ + + + P++++ SA
Sbjct: 299 RAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQ------PVRKVQSA 352
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSP 954
K C T PS ++ D L CSP
Sbjct: 353 THFKKVCGPSRTNPSVMID--DLLTP--CSP 379
Score = 44 (20.5 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 21/85 (24%), Positives = 33/85 (38%)
Query: 84 VKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFGAKSDES 143
+K DK +K + R+ K KD ++ G + ++ G G+ SD
Sbjct: 43 IKYEAHSDKAKESIRAKCMQYLDRAEKLKDYLRNKEKH--GKKPVKENQSEGKGSDSDSE 100
Query: 144 GHLSRRRKLFREMDEDAESEVGMEK 168
G ++KL E V MEK
Sbjct: 101 GDNPEKKKL----QEQLMGAVVMEK 121
Score = 40 (19.1 bits), Expect = 6.1e-34, Sum P(2) = 6.1e-34
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 134 VGFGAKSDESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDLVVSKAEKLDRFKELNDLG 193
+ + A SD++ S R K + +D + + + + G V + + + + + G
Sbjct: 43 IKYEAHSDKAKE-SIRAKCMQYLDRAEKLKDYLRNKEKHGKKPVKENQSEGKGSDSDSEG 101
Query: 194 DEPEK 198
D PEK
Sbjct: 102 DNPEK 106
>UNIPROTKB|Q793F9 [details] [associations]
symbol:Vps4a "Vacuolar protein sorting-associated protein
4A" species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:628810 GO:GO:0005524 GO:GO:0051301 GO:GO:0031902
GO:GO:0015031 GO:GO:0016197 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0017111 HSSP:O75351 InterPro:IPR015415
Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 CTD:27183
KO:K12196 OrthoDB:EOG4G1MGD EMBL:AB076398 IPI:IPI00204016
RefSeq:NP_663711.1 UniGene:Rn.12477 ProteinModelPortal:Q793F9
SMR:Q793F9 STRING:Q793F9 PhosphoSite:Q793F9 PRIDE:Q793F9
Ensembl:ENSRNOT00000027607 GeneID:246772 KEGG:rno:246772
UCSC:RGD:628810 NextBio:623855 ArrayExpress:Q793F9
Genevestigator:Q793F9 Uniprot:Q793F9
Length = 437
Score = 368 (134.6 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 89/271 (32%), Positives = 145/271 (53%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ VAGL+ +KE VILP+ +P F TP RG+LL G PGTGK+ + +A+
Sbjct: 126 WNDVAGLEGAKEALKEAVILPIKFPHLFTGKR-TPWRGILLFGPPGTGKSYLAKAV---- 180
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
A +F+ +D + K++G++E+ ++ LF++A + +PSIIF DE+D L R +
Sbjct: 181 ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE 240
Query: 805 DQTHSSVVSTLLALMDGL-KSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ + + L M G+ + +V+GATN P +D A+RR RF++ IY PLP
Sbjct: 241 SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAA 298
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
RA + LH P +T + + +A +T G++GAD+ + + + P++++ SA
Sbjct: 299 RAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQ------PVRKVQSA 352
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSP 954
K C T PS ++ D L CSP
Sbjct: 353 THFKKVCGPSRTNPSVMID--DLLTP--CSP 379
Score = 44 (20.5 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 21/85 (24%), Positives = 33/85 (38%)
Query: 84 VKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFGAKSDES 143
+K DK +K + R+ K KD ++ G + ++ G G+ SD
Sbjct: 43 IKYEAHSDKAKESIRAKCMQYLDRAEKLKDYLRNKEKH--GKKPVKENQSEGKGSDSDSE 100
Query: 144 GHLSRRRKLFREMDEDAESEVGMEK 168
G ++KL E V MEK
Sbjct: 101 GDNPEKKKL----QEQLMGAVVMEK 121
Score = 40 (19.1 bits), Expect = 6.1e-34, Sum P(2) = 6.1e-34
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 134 VGFGAKSDESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDLVVSKAEKLDRFKELNDLG 193
+ + A SD++ S R K + +D + + + + G V + + + + + G
Sbjct: 43 IKYEAHSDKAKE-SIRAKCMQYLDRAEKLKDYLRNKEKHGKKPVKENQSEGKGSDSDSEG 101
Query: 194 DEPEK 198
D PEK
Sbjct: 102 DNPEK 106
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 360 (131.8 bits), Expect = 3.1e-34, Sum P(2) = 3.1e-34
Identities = 86/249 (34%), Positives = 140/249 (56%)
Query: 669 VYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGH 728
+++ G+D K E + + G + M+E V LPL + + +G+ PPRGVLL+G
Sbjct: 136 IHLLGADE---KPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGP 192
Query: 729 PGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSII 788
PGTGKT++ +A+ + R+ G++ + KY+G+ R +R +F++A + P+II
Sbjct: 193 PGTGKTMLAKAVAHHTSAAFIRVV-----GSEFVQKYLGEGPRLVRDVFRLARENSPAII 247
Query: 789 FFDEIDGLAPCRTRQQ---DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALR 845
F DEID +A R Q D+ ++ LL MDG +V VI ATNR + +DPAL
Sbjct: 248 FIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALL 307
Query: 846 RPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQ 905
RPGR DR+I FPLP + I + T + L +++ R +GA++Q++C +
Sbjct: 308 RPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVS-RPDKLSGAEIQSICQE 366
Query: 906 AAIIALKRN 914
A + A+++N
Sbjct: 367 AGMHAIRKN 375
Score = 51 (23.0 bits), Expect = 3.1e-34, Sum P(2) = 3.1e-34
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 629 DAWRKDMEAEEKWLENCGEDEEFLKREGKRLHRDLL 664
D ++K M++ E L+ EE++K E K L R+LL
Sbjct: 24 DLYQK-MKSLESKLDFFNIQEEYIKYEYKNLKRELL 58
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 404 (147.3 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 107/289 (37%), Positives = 160/289 (55%)
Query: 659 LHRD-LLRIAPVYIGGSDSDSGKLFEG---FESVAGLQDVIRCMKEVVILPLLYPEFFDN 714
LH+D LL V S S S ++ G + V + + + E V+ PL +P+ F
Sbjct: 433 LHQDDLLGALTVIRPLSRSASDEVTVGDVTLDDVGDMAAAKQALTEAVLWPLQHPDTFAR 492
Query: 715 LGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLR 774
LG+ PPRGVLL+G PG GKT VVRAL + G +++ A KG++ + K+VG +E+ +R
Sbjct: 493 LGVEPPRGVLLYGPPGCGKTFVVRALAST---G--QLSVHAVKGSELMDKWVGSSEKAVR 547
Query: 775 LLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSS-VVSTLLALMDGLKSRGSVVVIGA 833
LF+ A PS++F DE+D LAP R + D S VV+ LL +DG+ VV++GA
Sbjct: 548 ELFRRARDSAPSLVFLDELDALAPRRGQSFDSGVSDRVVAALLTELDGIDPLRDVVMLGA 607
Query: 834 TNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTA 892
TNRP+ +DPAL RPGR +R ++ P R IL T P++ + L +AA
Sbjct: 608 TNRPDLIDPALLRPGRLERLVFVEPPDAAARREIL--RTAGKSIPLSSDVDLDEVAAGLD 665
Query: 893 GFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAV 941
G++ AD AL +AA+ A++R+ + +A A + R +L V
Sbjct: 666 GYSAADCVALLREAALTAMRRSIDAANVTAADLATARETVRASLDPLQV 714
Score = 185 (70.2 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 70/229 (30%), Positives = 100/229 (43%)
Query: 686 ESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCA 745
E + G Q + E + L L P LG GVL+ G G GK +VRA+ C
Sbjct: 213 EELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAV---C- 268
Query: 746 RGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQD 805
+R+ G + GD + + Q A + + ++ + D L P
Sbjct: 269 -DGRRLVTL--DGPEIGALAAGDRVKAVASAVQ-AVRHEGGVLLITDADALLPAAAEP-- 322
Query: 806 QTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRA 865
V S +L+ + + VV+I + RP+ +D LR P DRE+ PLP R
Sbjct: 323 -----VASLILSELRTAVATAGVVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRK 377
Query: 866 AILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKR 913
++L P P TG L L IA+RT GF ADL AL +AA+ A R
Sbjct: 378 SLLEALLN--PVP-TGDLNLDEIASRTPGFVVADLAALVREAALRAASR 423
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 401 (146.2 bits), Expect = 3.5e-34, Sum P(2) = 3.5e-34
Identities = 91/236 (38%), Positives = 137/236 (58%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
+ L+D+ + ++ P+ P+ F LGL P GVLL G PG GKTL+ +A+
Sbjct: 307 IGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVAN----- 361
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQT 807
+ + + + KG + L YVG++ER +R +FQ A+ P +IFFDE+D L P R+ ++
Sbjct: 362 ESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGA 421
Query: 808 HSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAI 867
VV+ LL MDGL++R V ++ ATNRP+ +DPA+ RPGR D+ ++ LP DR AI
Sbjct: 422 SVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAI 481
Query: 868 LSLHTERWPKPVTGS--LLKWIAA--RTAGFAGADLQALCTQAAIIALKRNFPLQE 919
L T+ KP + L+ IA R + GADL AL +A+I AL++ Q+
Sbjct: 482 LKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQK 537
Score = 274 (101.5 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 68/157 (43%), Positives = 88/157 (56%)
Query: 767 GDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRG 826
G++E++LR LF+ A P IIF DEID + P R +V+ LL MD L +
Sbjct: 64 GESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVA 123
Query: 827 S---VVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL 883
+ V+VIGATNRP+++DPALRR GRFDREI +P R IL + P
Sbjct: 124 ATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDF 183
Query: 884 LKWIAARTAGFAGADLQALCTQAAIIALKRNF-PLQE 919
+A T GF GADL ALC +AA+ A+ R LQE
Sbjct: 184 CH-LAHLTPGFVGADLMALCREAAMCAVNRVLMKLQE 219
Score = 39 (18.8 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 1110 VLISGSPGSGQRHLA 1124
VL++G PG G+ LA
Sbjct: 342 VLLAGPPGCGKTLLA 356
Score = 38 (18.4 bits), Expect = 3.5e-34, Sum P(2) = 3.5e-34
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 526 PEVYFAGLGCLKNIRAAL 543
P V +A +G L++IR L
Sbjct: 300 PNVTWADIGALEDIREEL 317
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 404 (147.3 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 92/231 (39%), Positives = 128/231 (55%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
+ G++DV +KE++ PL YP LGL+ PRG+LL G PG GKTL+VR C
Sbjct: 189 LGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVR-----CVAK 243
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQ---PSIIFFDEIDGLAPCRTRQQ 804
D G + G G++E LR +F+ A P ++ DEID L P RT
Sbjct: 244 DIGATLVTVNGPEVTGSRPGESEENLRRVFEQARDAADDGPCVLLIDEIDSLCPRRTGSS 303
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
+ +V+ LL LMD + S V+IGATN+P+++DPALRRPGRFDRE+ +PS+ R
Sbjct: 304 SAPENRLVAQLLTLMDAIGSHEGFVIIGATNQPDSLDPALRRPGRFDREVIIGVPSLLQR 363
Query: 865 AAILSLHTERWP-KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRN 914
+IL P P L +A T G+ GADL AL +AA+ A++ +
Sbjct: 364 RSILKCVCREMPLSPDVD--LNTLAEMTCGYVGADLSALSREAALQAMRHS 412
Score = 261 (96.9 bits), Expect = 2.5e-33, Sum P(2) = 2.5e-33
Identities = 57/145 (39%), Positives = 83/145 (57%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G+E + GL+DV +K+ + P+ +PE F LG++ PRGVLL+G PG KT +V+A
Sbjct: 450 GWEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVKA---- 505
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
A ++F+ GA+ YVGD+E+ L LF A C PSI+F DE+D + R
Sbjct: 506 -AASSSHCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDSMVGSREDG 564
Query: 804 QDQTHS---SVVSTLLALMDGLKSR 825
+HS V+S LL +DG+ R
Sbjct: 565 SSSSHSVQSQVLSVLLTELDGVGVR 589
Score = 192 (72.6 bits), Expect = 2.5e-33, Sum P(2) = 2.5e-33
Identities = 48/117 (41%), Positives = 72/117 (61%)
Query: 828 VVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWI 887
V+++ ATNRPEA+D AL RPGR D+ IY P P ++ R A+L + T+ P L+ +
Sbjct: 626 VLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLH-QDVCLEDL 684
Query: 888 AARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTL-PSFAVEE 943
AA+T F+GADL+ LC +AA++AL+ + L +S +K F L PS + E+
Sbjct: 685 AAQTELFSGADLENLCKEAALLALRED-GLA--VSCVRQKYFLKALQMLSPSLSAEQ 738
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 363 (132.8 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 81/233 (34%), Positives = 133/233 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GL + MKE V LPL PE ++ +G+ PP G+L++G PGTGKT++V+A+
Sbjct: 137 YTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN-- 194
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ ++ + G++ + KY+G+ R +R +F++A + PSIIF DE+D +A R Q
Sbjct: 195 ---ETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQ 251
Query: 805 ---DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D+ ++ LL MDG +V VI ATNR + +DPAL RPGR DR+I FPLP
Sbjct: 252 TGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 311
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRN 914
+ + I + ++ ++ RT + AD+ A+ +A + A+++N
Sbjct: 312 KQKRLIFQTIISKMNVSSDVNIESFVV-RTDKISAADIAAIAQEAGMQAIRKN 363
Score = 47 (21.6 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 639 EKWLENCGEDEEFLKREGKRLHRDLLR 665
+K ++ E+++K E K L R+L+R
Sbjct: 21 KKQIDILNIQEDYIKEEHKNLKRELIR 47
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 363 (132.8 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 81/233 (34%), Positives = 133/233 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GL + MKE V LPL PE ++ +G+ PP G+L++G PGTGKT++V+A+
Sbjct: 137 YTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN-- 194
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ ++ + G++ + KY+G+ R +R +F++A + PSIIF DE+D +A R Q
Sbjct: 195 ---ETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQ 251
Query: 805 ---DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D+ ++ LL MDG +V VI ATNR + +DPAL RPGR DR+I FPLP
Sbjct: 252 TGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 311
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRN 914
+ + I + ++ ++ RT + AD+ A+ +A + A+++N
Sbjct: 312 KQKRLIFQTIISKMNVSSDVNIESFVV-RTDKISAADIAAIAQEAGMQAIRKN 363
Score = 47 (21.6 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 639 EKWLENCGEDEEFLKREGKRLHRDLLR 665
+K ++ E+++K E K L R+L+R
Sbjct: 21 KKQIDILNIQEDYIKEEHKNLKRELIR 47
>UNIPROTKB|E2RA71 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 Pfam:PF04212 GO:GO:0017111 InterPro:IPR015415
Pfam:PF09336 SMART:SM00745 GeneTree:ENSGT00550000074466 OMA:FTGKRIP
EMBL:AAEX03004108 Ensembl:ENSCAFT00000032306 NextBio:20854819
Uniprot:E2RA71
Length = 437
Score = 368 (134.6 bits), Expect = 4.8e-34, Sum P(2) = 4.8e-34
Identities = 89/271 (32%), Positives = 145/271 (53%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ VAGL+ +KE VILP+ +P F TP RG+LL G PGTGK+ + +A+
Sbjct: 126 WNDVAGLEGAKEALKEAVILPIKFPHLFTGKR-TPWRGILLFGPPGTGKSYLAKAV---- 180
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
A +F+ +D + K++G++E+ ++ LF++A + +PSIIF DE+D L R +
Sbjct: 181 ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE 240
Query: 805 DQTHSSVVSTLLALMDGL-KSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ + + L M G+ + +V+GATN P +D A+RR RF++ IY PLP
Sbjct: 241 SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAA 298
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
RA + LH P +T + + +A +T G++GAD+ + + + P++++ SA
Sbjct: 299 RAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQ------PVRKVQSA 352
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSP 954
K C T PS ++ D L CSP
Sbjct: 353 THFKKVCGPSRTNPSVMID--DLLTP--CSP 379
Score = 41 (19.5 bits), Expect = 4.8e-34, Sum P(2) = 4.8e-34
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 134 VGFGAKSDESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDLVVSKAEKLDRFKELNDLG 193
+ + A SD++ S R K + +D + + + + G V + + + + + G
Sbjct: 43 IKYEAHSDKAKE-SIRAKCMQYLDRAEKLKDYLRNKEKHGKKPVKENQSESKGSDSDSEG 101
Query: 194 DEPEK 198
D PEK
Sbjct: 102 DNPEK 106
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 405 (147.6 bits), Expect = 5.9e-34, P = 5.9e-34
Identities = 111/295 (37%), Positives = 157/295 (53%)
Query: 625 KLSNDAWRKDMEAEEKWLENCGEDEEFLKRE-GKRLHRDLLRIAPVYIGGSDSDSGKLFE 683
++ N W + E++ E C L + G+ L + L +G S
Sbjct: 638 RIKNSGWAGGLSEEDEG-ELCAAGFPLLAEDLGQALEQ-LQSAHSQAVGAPKIPS----V 691
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
+ V GLQ+V + + E + LPL +PE +LGL G+LLHG PGTGKTL+ +A+
Sbjct: 692 SWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKAVATE 749
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
C+ + + + KG + + YVG +E +R +F A P IIFFDE+D LAP R R
Sbjct: 750 CS-----LTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 804
Query: 804 QDQ--THSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D VVS LLA +DGL S V VIGATNRP+ +DPAL RPGRFD+ ++ + +
Sbjct: 805 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVF--VGAS 862
Query: 862 EDRAA---ILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
EDRA+ +LS T ++ + SL+ + GADL +LC A ALKR
Sbjct: 863 EDRASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLTGADLYSLCADAMTAALKR 917
Score = 164 (62.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 63/200 (31%), Positives = 91/200 (45%)
Query: 717 LTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLL 776
LT P VLL G PG+GKT V A +C R + C G E +L+
Sbjct: 449 LTAPGSVLLRGPPGSGKTTAVTA---ACGRLGLHLLKVPCSSL-CADSS-GAVETKLQAA 503
Query: 777 FQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGA 833
F A +C+P ++ +D L R R + VV+TL L+ D L S ++V+
Sbjct: 504 FSRARRCRPVVLLLTAVDLLG--RDRDGLGEDARVVATLRRLLLDEDPLTSHPPLMVVAT 561
Query: 834 TNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAG 893
T+R + + PA + F E+ P+ S R +IL T P +L + +A R AG
Sbjct: 562 TSRAQDL-PADVQTA-FPHELEVPVLSEGQRLSILQALTAHLPLGQEVNLAQ-LARRCAG 618
Query: 894 FAGADLQALCTQAAIIALKR 913
F DL AL T ++ A R
Sbjct: 619 FVVGDLYALLTHSSRAACTR 638
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 894 FAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVT 935
F GA + A+ R F L+ +S A C ++T
Sbjct: 858 FVGASEDRASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLT 899
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 405 (147.6 bits), Expect = 6.1e-34, P = 6.1e-34
Identities = 100/234 (42%), Positives = 137/234 (58%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ V GLQ+V + + E + LPL +PE +LGL G+LLHG PGTGKTL+ +A+ C
Sbjct: 704 WHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKAVATEC 761
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ + + + KG + + YVG +E +R +F A P IIFFDE+D LAP R R
Sbjct: 762 S-----LTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRNG 816
Query: 805 DQ--THSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSME 862
D VVS LLA +DGL S V VIGATNRP+ +DPAL RPGRFD+ ++ + E
Sbjct: 817 DSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVS--E 874
Query: 863 DRAA---ILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
DRA+ +LS T ++ + SL+ + GADL +LC+ A ALKR
Sbjct: 875 DRASQLRVLSAITRKFKLEPSVSLVNVLDRCPPQLTGADLYSLCSDAMTTALKR 928
Score = 161 (61.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 66/220 (30%), Positives = 100/220 (45%)
Query: 717 LTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLL 776
LT VLL G PG+GKT V A +C+R + C G E++L+
Sbjct: 460 LTGTSSVLLRGPPGSGKTTAVTA---ACSRLGLHLLKVPCSSL-CADSS-GAVEKKLQAT 514
Query: 777 FQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGA 833
F A +C+P ++ +D L R R + VV+TL L+ D L S ++V+
Sbjct: 515 FSRARRCRPVVLLLTAVDLLG--RNRDGLGEDARVVATLCHLLQDEDPLTSCPPLMVVAT 572
Query: 834 TNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAG 893
T++ + + PA + F E+ P+ S R ++L T P +L + +A R AG
Sbjct: 573 TSQAQDL-PADVQTA-FPHELEVPVLSEGQRLSVLQALTAHLPLGQEVNLTQ-LARRCAG 629
Query: 894 FAGADLQALCTQAAIIALKR--NFPLQEILSAAAEKAFCS 931
F DL AL T ++ +A R N L LS E C+
Sbjct: 630 FVVGDLYALLTHSSRVACTRIKNSGLAGGLSEEDEGELCA 669
>UNIPROTKB|Q5ZMI9 [details] [associations]
symbol:VPS4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032367 "intracellular cholesterol transport" evidence=IEA]
[GO:0032510 "endosome to lysosome transport via multivesicular body
sorting pathway" evidence=IEA] [GO:0033993 "response to lipid"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005774 GO:GO:0005764 GO:GO:0016887 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
Pfam:PF04212 GO:GO:0007032 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 GO:GO:0032510
KO:K12196 CTD:9525 OMA:AKCAEYL EMBL:AC159826 EMBL:AJ719395
IPI:IPI00582043 RefSeq:NP_001006378.2 UniGene:Gga.8210 SMR:Q5ZMI9
STRING:Q5ZMI9 Ensembl:ENSGALT00000021007 GeneID:420901
KEGG:gga:420901 InParanoid:Q5ZMI9 NextBio:20823751 Uniprot:Q5ZMI9
Length = 438
Score = 366 (133.9 bits), Expect = 6.1e-34, Sum P(2) = 6.1e-34
Identities = 88/259 (33%), Positives = 141/259 (54%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ VAGL+ +KE VILP+ +P F TP RG+LL G PGTGK+ + +A+
Sbjct: 128 WSDVAGLEGAKEALKEAVILPIKFPHLFTGKR-TPWRGILLFGPPGTGKSYLAKAV---- 182
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
A +F+ +D + K++G++E+ ++ LFQ+A + +PSIIF DEID L R+ +
Sbjct: 183 ATEANNSTFFSVSSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENE 242
Query: 805 DQTHSSVVSTLLALMDGLK-SRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ + + L M G+ ++V+GATN P +D A+RR RF++ IY PLP
Sbjct: 243 SEAARRIKTEFLVQMQGVGVDNEGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEDHA 300
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
RAA+ LH P +T + + + RT G++GAD+ + A + P++++ SA
Sbjct: 301 RAAMFKLHLGSTPNLLTEADYRELGKRTDGYSGADISIIVRDALMQ------PVRKVQSA 354
Query: 924 AAEKAFCSKRVTLPSFAVE 942
K VT P+ V+
Sbjct: 355 THFKKVKGPSVTNPNIMVD 373
Score = 42 (19.8 bits), Expect = 6.1e-34, Sum P(2) = 6.1e-34
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 640 KWLENCGEDEEFLKREGKRLHRDLLRIAPVYIGGSDSD 677
++L+ + +E+LK+ K + + P G+DSD
Sbjct: 61 EYLDRAEKLKEYLKKREKTAPKPVKESGPADGKGNDSD 98
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 389 (142.0 bits), Expect = 7.3e-34, P = 7.3e-34
Identities = 97/262 (37%), Positives = 140/262 (53%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
F VAG+ +V + E+V L P+ + G+ P+GVL+ G PG GKTL+ +A+ G
Sbjct: 151 FNDVAGVDEVKMELSELVDF-LQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEA 209
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
+ +F + G+ + YVG +++R LF A+ PSI+F DEID + R
Sbjct: 210 G-----VPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMS 264
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
+ S ++ LL MDG + V+VI ATN+ E +DPAL R GRFDR I+ LP +DR
Sbjct: 265 NVERDSTLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDR 324
Query: 865 AAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILS-- 922
IL ++ + + L IA + GF+GA L+ L +AAI AL+RN L E
Sbjct: 325 LKILEIYMKDKNNNIN---LNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFY 381
Query: 923 AAAEKAFCSKRVTLPSFAVEER 944
A K K+ L SF EE+
Sbjct: 382 AVLNKVLLGKKKIL-SFNNEEK 402
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 401 (146.2 bits), Expect = 8.4e-34, P = 8.4e-34
Identities = 94/245 (38%), Positives = 134/245 (54%)
Query: 668 PVYIGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHG 727
P Y ++ + F+ V G+Q+V ++E+V LL+P ++++G P+GVLL G
Sbjct: 282 PQYFAKEYDETNQTPTSFDDVKGIQEVKEELEEIVDY-LLHPTKYNSIGAKLPKGVLLSG 340
Query: 728 HPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSI 787
PGTGKTL+ RA+ G +++ G+ KYVG R++R LF A + QP I
Sbjct: 341 EPGTGKTLLARAIAGEAG-----VSFLYTTGSSFDEKYVGVGSRRVRELFNAAREKQPCI 395
Query: 788 IFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRP 847
IF DEID + R H+ + LL MDG + +++IGATN P ++DPAL RP
Sbjct: 396 IFIDEIDAVGKSRNTAH---HNETLLQLLTEMDGFEGNSQIMIIGATNAPNSLDPALLRP 452
Query: 848 GRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAA 907
GRFDR I P+P M+ R+ I+ H + K IA T GF GADL L AA
Sbjct: 453 GRFDRHISVPIPDMKGRSEIID-HYLKKVKHTVEVKADTIARATPGFTGADLSNLINTAA 511
Query: 908 IIALK 912
I A++
Sbjct: 512 IKAVQ 516
>UNIPROTKB|I3LL27 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0048471 Pfam:PF04212 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
GeneTree:ENSGT00550000074466 CTD:27183 KO:K12196 OMA:VRWNDVA
EMBL:FP015939 EMBL:FP325157 RefSeq:NP_001230347.1 UniGene:Ssc.15717
Ensembl:ENSSSCT00000026219 GeneID:100627841 KEGG:ssc:100627841
Uniprot:I3LL27
Length = 437
Score = 368 (134.6 bits), Expect = 9.9e-34, Sum P(2) = 9.9e-34
Identities = 89/271 (32%), Positives = 145/271 (53%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ VAGL+ +KE VILP+ +P F TP RG+LL G PGTGK+ + +A+
Sbjct: 126 WNDVAGLEGAKEALKEAVILPIKFPHLFTGKR-TPWRGILLFGPPGTGKSYLAKAV---- 180
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
A +F+ +D + K++G++E+ ++ LF++A + +PSIIF DE+D L R +
Sbjct: 181 ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE 240
Query: 805 DQTHSSVVSTLLALMDGL-KSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+ + + L M G+ + +V+GATN P +D A+RR RF++ IY PLP
Sbjct: 241 SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAA 298
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
RA + LH P +T + + +A +T G++GAD+ + + + P++++ SA
Sbjct: 299 RAQMFRLHLGSTPHNLTEANIHELARKTEGYSGADISIIVRDSLMQ------PVRKVQSA 352
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSP 954
K C T PS ++ D L CSP
Sbjct: 353 THFKKVCGPSRTNPSIMID--DLLTP--CSP 379
Score = 38 (18.4 bits), Expect = 9.9e-34, Sum P(2) = 9.9e-34
Identities = 13/65 (20%), Positives = 29/65 (44%)
Query: 134 VGFGAKSDESGHLSRRRKLFREMDEDAESEVGMEKGSEGGDLVVSKAEKLDRFKELNDLG 193
+ + A +D++ S R K + +D + + + + G V + + + + + G
Sbjct: 43 IKYEAHNDKAKE-SIRAKCMQYLDRAEKLKDYLRNKEKHGKKPVKENQSESKGSDSDSEG 101
Query: 194 DEPEK 198
D PEK
Sbjct: 102 DNPEK 106
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 378 (138.1 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 89/248 (35%), Positives = 140/248 (56%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + GL + ++E V LPL + E + +G+ PPRGVL++G PG GKT++ +A+ +
Sbjct: 160 YGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANT 219
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
A R+ G++ + KY+G+ R +R +F++A++ PSIIF DEID +A R Q
Sbjct: 220 AASFIRVV-----GSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQ 274
Query: 805 ---DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D+ ++ LL MDG +V VI ATNR + +DPAL RPGR DR+I FPLP
Sbjct: 275 TGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDR 334
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEIL 921
+ + S R L W+A R +GAD+ ++C +A + A++ N + +L
Sbjct: 335 RQKRLVFSTVCSRMNLSDDVDLEDWVA-RPDKISGADINSICQEAGMQAVRENRYV--VL 391
Query: 922 SAAAEKAF 929
+ EKA+
Sbjct: 392 TKDLEKAY 399
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 359 (131.4 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 106/296 (35%), Positives = 153/296 (51%)
Query: 648 DEEFLKREGK-RLHRD---LLRIAPVYIGGSDSDSG---KLFEGFESVAGLQDVIRCMKE 700
D E LK LHR L+ I P S S G K + V GL + +KE
Sbjct: 110 DRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKPDVTYADVGGLDMQKQEIKE 169
Query: 701 VVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGAD 760
V LPL + + +G+ PPRGVLL+G PGTGKT++V+A+ S RI G++
Sbjct: 170 AVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRI-----NGSE 224
Query: 761 CLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ---DQTHSSVVSTLLA 817
+ KY+G+ R +R +F++A + P+IIF DEID +A R Q D+ ++ LL
Sbjct: 225 FVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLN 284
Query: 818 LMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFP-LPSMEDRAAILSLHTERWP 876
MDG +V VI ATNR + +DPAL RPGR DR+I FP L +R I S +
Sbjct: 285 QMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLKDRRERRLIFSTIASKMS 344
Query: 877 KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSK 932
L I R +GA + A+ +A + A+++N + IL + E+A+ S+
Sbjct: 345 LAPEADLDSLII-RNDPLSGAVIAAIMQEAGLRAVRKNRYM--ILQSDLEEAYTSQ 397
Score = 46 (21.3 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 629 DAWRKDMEAEEKWLENCGEDEEFLKREGKRLHRDLLR 665
D + K ++ EK L+ EE++K E + L R+L+R
Sbjct: 29 DVYLK-LKKLEKELDLLLLQEEYIKDEQRHLKRELVR 64
Score = 38 (18.4 bits), Expect = 9.0e-33, Sum P(2) = 9.0e-33
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 647 EDEEFLKREGKRLHRDLLRI--APVYIG 672
+++ LKRE R ++ RI P+ IG
Sbjct: 53 DEQRHLKRELVRAQEEVKRIKSVPLVIG 80
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 359 (131.4 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 106/296 (35%), Positives = 153/296 (51%)
Query: 648 DEEFLKREGK-RLHRD---LLRIAPVYIGGSDSDSG---KLFEGFESVAGLQDVIRCMKE 700
D E LK LHR L+ I P S S G K + V GL + +KE
Sbjct: 110 DRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQKPDVTYADVGGLDMQKQEIKE 169
Query: 701 VVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGAD 760
V LPL + + +G+ PPRGVLL+G PGTGKT++V+A+ S RI G++
Sbjct: 170 AVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRI-----NGSE 224
Query: 761 CLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ---DQTHSSVVSTLLA 817
+ KY+G+ R +R +F++A + P+IIF DEID +A R Q D+ ++ LL
Sbjct: 225 FVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLN 284
Query: 818 LMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFP-LPSMEDRAAILSLHTERWP 876
MDG +V VI ATNR + +DPAL RPGR DR+I FP L +R I S +
Sbjct: 285 QMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLKDRRERRLIFSTIASKMS 344
Query: 877 KPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSK 932
L I R +GA + A+ +A + A+++N + IL + E+A+ S+
Sbjct: 345 LAPEADLDSLII-RNDPLSGAVIAAIMQEAGLRAVRKNRYM--ILQSDLEEAYTSQ 397
Score = 46 (21.3 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 629 DAWRKDMEAEEKWLENCGEDEEFLKREGKRLHRDLLR 665
D + K ++ EK L+ EE++K E + L R+L+R
Sbjct: 29 DVYLK-LKKLEKELDLLLLQEEYIKDEQRHLKRELVR 64
Score = 38 (18.4 bits), Expect = 9.0e-33, Sum P(2) = 9.0e-33
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 647 EDEEFLKREGKRLHRDLLRI--APVYIG 672
+++ LKRE R ++ RI P+ IG
Sbjct: 53 DEQRHLKRELVRAQEEVKRIKSVPLVIG 80
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 399 (145.5 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 96/228 (42%), Positives = 134/228 (58%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
+ GL + ++E++ LPL YP LGL PRGVLL G PG GKT +VRA+ G
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREA--G 259
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQ---PSIIFFDEIDGLAPCRTRQQ 804
+ +A A G G+ E +R +FQ A + PS++F DE+D L P R +
Sbjct: 260 AELLAVSAPA---LQGSRPGETEENVRRVFQRARELASRGPSLLFLDEMDALCPQRGSRA 316
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
+ S VV+ +L L+DG VVV+GATNRP+A+DPALRRPGRFDRE+ P+++ R
Sbjct: 317 PE--SRVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQR 374
Query: 865 AAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIAL 911
IL + T + P ++ + L +A T G+ GADL ALC +AA+ AL
Sbjct: 375 KEILQVITSKMP--ISSHVDLGLLAEMTVGYVGADLTALCREAAMHAL 420
Score = 391 (142.7 bits), Expect = 9.9e-33, P = 9.9e-33
Identities = 100/251 (39%), Positives = 143/251 (56%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV +K+ + PL +P F +GLT P+GVLL+G PG KT +VRAL SC
Sbjct: 463 WEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSC 522
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
++ + GAD +VGD+E+ L +F+ A P+I+F DEID + R+ +
Sbjct: 523 -----HCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSILGARSASK 577
Query: 805 D--QTHSSVVSTLLALMDG--LKS---RGS--------------VVVIGATNRPEAVDPA 843
V+S LL +DG LK+ RGS V++I ATNRP+ +D A
Sbjct: 578 TGCDVQERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTA 637
Query: 844 LRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALC 903
L RPGR D+ IY P P + R +IL + T+ P SL +AA T F+GADL+ LC
Sbjct: 638 LLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLEN-LAAETCFFSGADLRNLC 696
Query: 904 TQAAIIALKRN 914
T+AA++AL+ N
Sbjct: 697 TEAALLALQEN 707
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 401 (146.2 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 112/295 (37%), Positives = 157/295 (53%)
Query: 625 KLSNDAWRKDMEAEEKWLENCGEDEEFLKRE-GKRLHRDLLRIAPVYIGGSDSDSGKLFE 683
++ N W + E++ E C L + G+ L + L IG S
Sbjct: 649 RIKNSGWAGGLSEEDEG-ELCAAGFPLLAEDFGQALEQ-LQAAHSQAIGAPRIPS----V 702
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
+ V GLQ+V + + E + LPL +PE +LGL G+LLHG PGTGKTL+ +A+
Sbjct: 703 SWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRRS-GLLLHGPPGTGKTLLAKAVATE 760
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
C+ + + + KG + + YVG +E +R +F A P IIFFDE+D LAP R R
Sbjct: 761 CS-----LTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPNRGRS 815
Query: 804 QDQ--THSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D VVS LLA +DGL S V VIGATNRP+ +DPAL RPGRFD+ ++ +
Sbjct: 816 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVN-- 873
Query: 862 EDRAA---ILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
EDRA+ +LS T ++ + SL+ + GADL +LC+ A ALKR
Sbjct: 874 EDRASQLRVLSAITRKFRLEPSVSLVDVLDHCPPQLTGADLYSLCSDAMTAALKR 928
Score = 147 (56.8 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 73/260 (28%), Positives = 111/260 (42%)
Query: 717 LTPPRGVLLHGHPGTGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLL 776
LT VLL G PG+GKT V A +C+R + C G E +L+
Sbjct: 460 LTGTGSVLLRGPPGSGKTTAVAA---ACSRLGLHLLKVPCSSL-CADSS-GAVETKLQAA 514
Query: 777 FQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGA 833
F A +C+P ++ +D L R R + VV+TL L+ D L S ++V+
Sbjct: 515 FSRARRCRPVVLLLTAVDLLG--RDRDGLGEDARVVATLRHLLLDEDPLASCPPLMVVAT 572
Query: 834 TNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKWIAARTAG 893
T+R + + PA + F E+ P+ + R ++L T P +L + +A R AG
Sbjct: 573 TSRAQDL-PADVQTA-FPHELEVPVLAEAQRLSVLRALTAHLPLGQEVNLAQ-LARRCAG 629
Query: 894 FAGADLQALCTQAAIIALKR--NFPLQEILSAAAEKAFCSKRVTLPSFAVEERDWLEALS 951
F DL AL T ++ A R N LS E C+ P A + LE L
Sbjct: 630 FVVGDLFALLTHSSRAACTRIKNSGWAGGLSEEDEGELCA--AGFPLLAEDFGQALEQLQ 687
Query: 952 CSPPPC--SKREAGIAAHDL 969
+ + R ++ HD+
Sbjct: 688 AAHSQAIGAPRIPSVSWHDV 707
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 400 (145.9 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 95/262 (36%), Positives = 146/262 (55%)
Query: 687 SVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCAR 746
+++G++D + ++ P+ +PE + ++G+T P GVLL G PG GKTL+ +A+
Sbjct: 473 ALSGIRDELAT---AIVDPIKHPELYASVGITAPTGVLLWGPPGCGKTLLAKAVAN---- 525
Query: 747 GDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQ 806
+ R + + KG + L KYVG++ER +R +F A P +IFFDE+D L P R +
Sbjct: 526 -ESRANFISVKGPELLNKYVGESERAVRQVFVRARSSIPCVIFFDELDALVPRRDDTLSE 584
Query: 807 THSSVVSTLLALMDGL-KSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRA 865
+ VV+TLL +DGL SR + VI ATNRP+ +DPA+ RPGR + ++ LPS +R
Sbjct: 585 ASARVVNTLLTELDGLGSSRQGIYVIAATNRPDIIDPAMLRPGRLETLLFVNLPSPLERV 644
Query: 866 AILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAA 925
IL R P L + +A GF+GADL +L +A A+KR ++ A
Sbjct: 645 EILQTLVRRLPIEFNEDLRR-LAEECEGFSGADLTSLLRRAGYNAIKRRDTIK-FDDFVA 702
Query: 926 EKAFCSKRVT-LPSFAVEERDW 946
K+F VT + + R+W
Sbjct: 703 AKSFIRPSVTDMKKYDKLRREW 724
Score = 378 (138.1 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 102/292 (34%), Positives = 154/292 (52%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
+ GL DV++ + ++VILP+ P+ + + PPRGVLLHG PG GKT++ A
Sbjct: 167 LGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFAAELG-- 224
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQT 807
+ + + + G++E+ LR F+ A++ P +IF DEID + P R Q +
Sbjct: 225 ---VPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPKRENSQREM 281
Query: 808 HSSVVSTLLALMDGL---KSRGS-VVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
+V+ LL MD L K+ G V+V+ ATNRP+++D ALRR GRFD+EI +PS
Sbjct: 282 EKRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVPSEPV 341
Query: 864 RAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
R IL T + + V K +A RT GF GADL L + A A+KR L + S
Sbjct: 342 REQILRALTRKM-RLVDDLDFKTLAKRTPGFVGADLNDLVSTAGSTAIKRYLDL--LKSN 398
Query: 924 AAEKAFCSKRVTLPSFAVEERDWLEALSCSPPPCSKREAGIAAHDLVSSPLP 975
+ E+ + L S +V+E L + P S+ E + ++D + LP
Sbjct: 399 SGEEMDIEGQDDL-SPSVKELRRLITHAKETPIGSEAEVVLVSNDDFFTALP 449
Score = 46 (21.3 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 83 PVKKRRKMDKTVNLYVSKSLNSSRRSAKEKDNEKSVSPGVWGSRLRSRGRNVGFGAKSDE 142
PV++ M+K++ V + N++ ++ K + N ++ +P ++ R G G E
Sbjct: 95 PVQESNSMNKSL---VG-AWNTASKAPKSESNAENGTPAPTTTKKRHHG---G------E 141
Query: 143 SGHLSRRRKLFREMDEDAESEVGM 166
S H S+RRK +D + V +
Sbjct: 142 S-HSSKRRKAENAVDRSPPTHVSL 164
Score = 45 (20.9 bits), Expect = 1.8e-30, Sum P(3) = 1.8e-30
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 392 ISTSEVKDGSSDHQKDDFLAMLEEKPVECENAPK---VDAFNPGS 433
I T + D +D DF LEE+PV+ N+ V A+N S
Sbjct: 71 IKTDVLGDDENDSIDGDF-GGLEEQPVQESNSMNKSLVGAWNTAS 114
Score = 42 (19.8 bits), Expect = 3.7e-30, Sum P(3) = 3.7e-30
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 458 KPPKRLIQDAGDSENEVYSGSSASEEPNYDIWDGFG 493
+ PKR+++D+ + EV ++ N I FG
Sbjct: 54 RKPKRILEDSIERVVEVIKTDVLGDDENDSIDGDFG 89
Score = 39 (18.8 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 1094 LLQNISCTASKGSGFRVLISGSPGSGQRHLAACLLHSFIGN 1134
L ++ TA G VL+ G PG G+ LA + + N
Sbjct: 494 LYASVGITAPTG----VLLWGPPGCGKTLLAKAVANESRAN 530
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 376 (137.4 bits), Expect = 1.8e-33, P = 1.8e-33
Identities = 91/247 (36%), Positives = 139/247 (56%)
Query: 671 IGGSDSDSGKLFEGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPG 730
IGG D ++ E + L + + E ++LP+ + E F+NLG+ PP+GVL++G PG
Sbjct: 189 IGGLDKQIQEVREA-RHLTSLLCLSASLVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 247
Query: 731 TGKTLVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFF 790
TGKTL+ RA CA K + G + ++GD + +R F +A++ PSIIF
Sbjct: 248 TGKTLLARA----CAAQTKA-TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFI 302
Query: 791 DEIDGLAPCRTRQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRP 847
DE+D + R + V T+L L+ DG + V VI ATNR + +DPAL R
Sbjct: 303 DELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRS 362
Query: 848 GRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQA 906
GR DR+I FP+P+ E RA I+ +H+ + V+ + + +A T F GA +A+C +A
Sbjct: 363 GRLDRKIEFPMPNEEARARIMQIHSRKMN--VSPDVNYEELARCTDDFNGAQCKAVCVEA 420
Query: 907 AIIALKR 913
+IAL+R
Sbjct: 421 GMIALRR 427
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 404 (147.3 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 91/230 (39%), Positives = 134/230 (58%)
Query: 684 GFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGS 743
G++ + GL+DV + + + ++LP YPE F NL + GVLL+G PGTGKTL L G
Sbjct: 846 GWDRIGGLKDVRQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTL----LAGV 901
Query: 744 CARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQ 803
AR + + + + KG + L KY+G +E+ +R +F A+ +P I+FFDE D +AP R
Sbjct: 902 VAR-ESGMNFISVKGPELLSKYIGASEQAVRDIFSRAQAAKPCIVFFDEFDSIAPRRGHD 960
Query: 804 QDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMED 863
VV+ LL +DG++ V V+ AT+RP+ +DPAL RPGR D+ +Y P P
Sbjct: 961 NTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQSS 1020
Query: 864 RAAILSL--HTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIAL 911
R IL H+ V L+++AA+T F GADL+AL A + A+
Sbjct: 1021 RCEILKALSHSLSLANDVD---LEYLAAKTEHFTGADLKALLYNAQLEAI 1067
Score = 52 (23.4 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 219 EESGRGEELEVVRNEREDSKTIPESVVGNEGE 250
+ SG G +++V N ED K++ E GN GE
Sbjct: 376 QASGEGSVVQIVWNGFEDLKSVIE--YGNGGE 405
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 410 (149.4 bits), Expect = 2.6e-33, Sum P(4) = 2.6e-33
Identities = 103/276 (37%), Positives = 151/276 (54%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
V L+D+ + ++ P+ PE F LGL P GVLL G PG GKTL+ +A+
Sbjct: 582 VGALEDIREELTMAILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVAN----- 636
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQT 807
+ + + + KG + L YVG++ER +R +FQ A+ P +IFFDE+D L P R+ ++
Sbjct: 637 ESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGA 696
Query: 808 HSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAI 867
VV+ LL MDGL++R V ++ ATNRP+ +DPA+ RPGR D+ ++ LP DR AI
Sbjct: 697 SVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAI 756
Query: 868 LSLHTERWPKPVTGSL--LKWIAA--RTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
L T+ KP L+ IA R + GADL AL +A++ AL++ Q+
Sbjct: 757 LKTITKNGTKPPLDEDVDLEAIANDHRCDCYTGADLSALVREASLCALRQEITGQKNGIG 816
Query: 924 AAEKAFCSK------RVTLPSFAVEERDWLEALSCS 953
AE K R PS +V+++ EAL S
Sbjct: 817 TAELTVSHKHFEEAFRKVKPSISVKDQRMYEALQRS 852
Score = 386 (140.9 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 95/234 (40%), Positives = 131/234 (55%)
Query: 685 FESVAGLQDVIRCMKEV--VILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
FE V G D +KEV +++ + +PE + +LG+ PPRGVLLHG PG GKTL+ A+ G
Sbjct: 263 FEDVGG-NDAT--LKEVCKMLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAG 319
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
D I A + + G++E++LR LF A P I+F DEID + P R
Sbjct: 320 EL---DLPILKVA--APEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITPKREV 374
Query: 803 QQDQTHSSVVSTLLALMDGLKSRGS---VVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+V+ LL MD L + + V+V+GATNRP+++DPALRR GRFDRE+ +P
Sbjct: 375 ASKDMERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLGIP 434
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
R IL + P T + +A T GF GADL ALC +AA+ A+ R
Sbjct: 435 DEASRERILQTLCRKLRLPETFNF-SHLAHLTPGFVGADLMALCREAAVCAVHR 487
Score = 45 (20.9 bits), Expect = 2.6e-33, Sum P(4) = 2.6e-33
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 130 RGRNVGFGAKSDESGHLSRRRKLFREMDEDAESEV-GMEKGSEGGDLVVSKAE 181
+GR++G S+ L R L R+ D +E ++ G+ E D +V+ +E
Sbjct: 511 QGRSLGAEPPSETQDELQRLLGLLRDQDPISEEQMQGL--CLELNDFIVALSE 561
Score = 44 (20.5 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 456 DGKPPKRLIQDAGDSENEVYSGSSASEE 483
DG KR QD D E YS ++ E
Sbjct: 80 DGHLAKRARQDEDDEYTESYSDDDSNME 107
Score = 41 (19.5 bits), Expect = 2.6e-33, Sum P(4) = 2.6e-33
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 25 KKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARNLE 63
K+HK L + E+ + +EDD+ N+E
Sbjct: 70 KEHKNLKEL-EDGHLAKRARQDEDDEYTESYSDDDSNME 107
Score = 39 (18.8 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 1110 VLISGSPGSGQRHLA 1124
VL++G PG G+ LA
Sbjct: 617 VLLAGPPGCGKTLLA 631
Score = 37 (18.1 bits), Expect = 2.6e-33, Sum P(4) = 2.6e-33
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 526 PEVYFAGLGCLKNIRAAL 543
P V +A +G L++IR L
Sbjct: 575 PNVTWADVGALEDIREEL 592
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 360 (131.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 85/248 (34%), Positives = 140/248 (56%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G+ + ++E V LPL + E + +G+ PPRGVL++G PG GKT++ +A+
Sbjct: 163 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 222
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
R+ G++ + KY+G+ R +R +F++A++ P+IIF DEID +A R Q
Sbjct: 223 TAAFIRVV-----GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQ 277
Query: 805 ---DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D+ ++ LL MDG +V VI ATNR + +DPAL RPGR DR+I FPLP
Sbjct: 278 TGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 337
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEIL 921
+ I S T + L ++A R +GAD+ ++C ++ ++A++ N + +L
Sbjct: 338 RQKRLIFSTITSKMNLSEEVDLEDYVA-RPDKISGADINSICQESGMLAVRENRYI--VL 394
Query: 922 SAAAEKAF 929
+ EKA+
Sbjct: 395 AKDFEKAY 402
Score = 42 (19.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 633 KDMEAEEKWLENCGEDEEFLKREGKRLHRDLL 664
K ++ E ++LE EE++K E K L ++ L
Sbjct: 44 KKLQQELEFLE---VQEEYIKDEQKNLKKEFL 72
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 360 (131.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 85/248 (34%), Positives = 140/248 (56%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G+ + ++E V LPL + E + +G+ PPRGVL++G PG GKT++ +A+
Sbjct: 164 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
R+ G++ + KY+G+ R +R +F++A++ P+IIF DEID +A R Q
Sbjct: 224 TAAFIRVV-----GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQ 278
Query: 805 ---DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D+ ++ LL MDG +V VI ATNR + +DPAL RPGR DR+I FPLP
Sbjct: 279 TGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 338
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEIL 921
+ I S T + L ++A R +GAD+ ++C ++ ++A++ N + +L
Sbjct: 339 RQKRLIFSTITSKMNLSEEVDLEDYVA-RPDKISGADINSICQESGMLAVRENRYI--VL 395
Query: 922 SAAAEKAF 929
+ EKA+
Sbjct: 396 AKDFEKAY 403
Score = 42 (19.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 633 KDMEAEEKWLENCGEDEEFLKREGKRLHRDLL 664
K ++ E ++LE EE++K E K L ++ L
Sbjct: 45 KKLQQELEFLE---VQEEYIKDEQKNLKKEFL 73
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 360 (131.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 85/248 (34%), Positives = 140/248 (56%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G+ + ++E V LPL + E + +G+ PPRGVL++G PG GKT++ +A+
Sbjct: 164 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
R+ G++ + KY+G+ R +R +F++A++ P+IIF DEID +A R Q
Sbjct: 224 TAAFIRVV-----GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQ 278
Query: 805 ---DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D+ ++ LL MDG +V VI ATNR + +DPAL RPGR DR+I FPLP
Sbjct: 279 TGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 338
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEIL 921
+ I S T + L ++A R +GAD+ ++C ++ ++A++ N + +L
Sbjct: 339 RQKRLIFSTITSKMNLSEEVDLEDYVA-RPDKISGADINSICQESGMLAVRENRYI--VL 395
Query: 922 SAAAEKAF 929
+ EKA+
Sbjct: 396 AKDFEKAY 403
Score = 42 (19.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 633 KDMEAEEKWLENCGEDEEFLKREGKRLHRDLL 664
K ++ E ++LE EE++K E K L ++ L
Sbjct: 45 KKLQQELEFLE---VQEEYIKDEQKNLKKEFL 73
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 360 (131.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 85/248 (34%), Positives = 140/248 (56%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G+ + ++E V LPL + E + +G+ PPRGVL++G PG GKT++ +A+
Sbjct: 164 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
R+ G++ + KY+G+ R +R +F++A++ P+IIF DEID +A R Q
Sbjct: 224 TAAFIRVV-----GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQ 278
Query: 805 ---DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D+ ++ LL MDG +V VI ATNR + +DPAL RPGR DR+I FPLP
Sbjct: 279 TGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 338
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEIL 921
+ I S T + L ++A R +GAD+ ++C ++ ++A++ N + +L
Sbjct: 339 RQKRLIFSTITSKMNLSEEVDLEDYVA-RPDKISGADINSICQESGMLAVRENRYI--VL 395
Query: 922 SAAAEKAF 929
+ EKA+
Sbjct: 396 AKDFEKAY 403
Score = 42 (19.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 633 KDMEAEEKWLENCGEDEEFLKREGKRLHRDLL 664
K ++ E ++LE EE++K E K L ++ L
Sbjct: 45 KKLQQELEFLE---VQEEYIKDEQKNLKKEFL 73
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 360 (131.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 85/248 (34%), Positives = 140/248 (56%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G+ + ++E V LPL + E + +G+ PPRGVL++G PG GKT++ +A+
Sbjct: 164 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
R+ G++ + KY+G+ R +R +F++A++ P+IIF DEID +A R Q
Sbjct: 224 TAAFIRVV-----GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQ 278
Query: 805 ---DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D+ ++ LL MDG +V VI ATNR + +DPAL RPGR DR+I FPLP
Sbjct: 279 TGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 338
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEIL 921
+ I S T + L ++A R +GAD+ ++C ++ ++A++ N + +L
Sbjct: 339 RQKRLIFSTITSKMNLSEEVDLEDYVA-RPDKISGADINSICQESGMLAVRENRYI--VL 395
Query: 922 SAAAEKAF 929
+ EKA+
Sbjct: 396 AKDFEKAY 403
Score = 42 (19.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 633 KDMEAEEKWLENCGEDEEFLKREGKRLHRDLL 664
K ++ E ++LE EE++K E K L ++ L
Sbjct: 45 KKLQQELEFLE---VQEEYIKDEQKNLKKEFL 73
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 360 (131.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 85/248 (34%), Positives = 140/248 (56%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G+ + ++E V LPL + E + +G+ PPRGVL++G PG GKT++ +A+
Sbjct: 164 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
R+ G++ + KY+G+ R +R +F++A++ P+IIF DEID +A R Q
Sbjct: 224 TAAFIRVV-----GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQ 278
Query: 805 ---DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D+ ++ LL MDG +V VI ATNR + +DPAL RPGR DR+I FPLP
Sbjct: 279 TGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 338
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEIL 921
+ I S T + L ++A R +GAD+ ++C ++ ++A++ N + +L
Sbjct: 339 RQKRLIFSTITSKMNLSEEVDLEDYVA-RPDKISGADINSICQESGMLAVRENRYI--VL 395
Query: 922 SAAAEKAF 929
+ EKA+
Sbjct: 396 AKDFEKAY 403
Score = 42 (19.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 633 KDMEAEEKWLENCGEDEEFLKREGKRLHRDLL 664
K ++ E ++LE EE++K E K L ++ L
Sbjct: 45 KKLQQELEFLE---VQEEYIKDEQKNLKKEFL 73
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 360 (131.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 85/248 (34%), Positives = 140/248 (56%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+ + G+ + ++E V LPL + E + +G+ PPRGVL++G PG GKT++ +A+
Sbjct: 164 YADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQ 804
R+ G++ + KY+G+ R +R +F++A++ P+IIF DEID +A R Q
Sbjct: 224 TAAFIRVV-----GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQ 278
Query: 805 ---DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSM 861
D+ ++ LL MDG +V VI ATNR + +DPAL RPGR DR+I FPLP
Sbjct: 279 TGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 338
Query: 862 EDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKRNFPLQEIL 921
+ I S T + L ++A R +GAD+ ++C ++ ++A++ N + +L
Sbjct: 339 RQKRLIFSTITSKMNLSEEVDLEDYVA-RPDKISGADINSICQESGMLAVRENRYI--VL 395
Query: 922 SAAAEKAF 929
+ EKA+
Sbjct: 396 AKDFEKAY 403
Score = 42 (19.8 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 633 KDMEAEEKWLENCGEDEEFLKREGKRLHRDLL 664
K ++ E ++LE EE++K E K L ++ L
Sbjct: 45 KKLQQELEFLE---VQEEYIKDEQKNLKKEFL 73
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 359 (131.4 bits), Expect = 3.4e-33, Sum P(2) = 3.4e-33
Identities = 89/236 (37%), Positives = 131/236 (55%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + V GL I + E ++LP+ + F ++G+ P+G L++G PGTGKTL+ RA
Sbjct: 178 ETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARA--- 234
Query: 743 SCARGDKRIAYFARKGADCLGK-YVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRT 801
CA A F + A L + Y+G+ + +R F +A++ P+IIF DE+D + R
Sbjct: 235 -CAAQTN--ATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRF 291
Query: 802 RQQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPL 858
+ V T+L L+ DG S V V+ ATNR + +DPAL R GR DR+I FPL
Sbjct: 292 DSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPL 351
Query: 859 PSMEDRAAILSLHTERWPKPVTGSLLKW--IAARTAGFAGADLQALCTQAAIIALK 912
PS + RA IL +H+ K T + W +A T F GA L+A+ +A +IAL+
Sbjct: 352 PSEDSRAQILQIHSR---KMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALR 404
Score = 42 (19.8 bits), Expect = 3.4e-33, Sum P(2) = 3.4e-33
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 300 VEVMDTTEKSDKERMQ 315
VEVMD E DKE +
Sbjct: 83 VEVMDMNEIEDKENSE 98
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 373 (136.4 bits), Expect = 3.8e-33, P = 3.8e-33
Identities = 87/235 (37%), Positives = 134/235 (57%)
Query: 683 EGFESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
E + + GL I+ + E ++LP+ + E F+NLG+ PP+GVL++G PGTGKTL+ RA
Sbjct: 178 EQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA--- 234
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
CA K + G + ++GD + +R F +A++ PSIIF DE+D R
Sbjct: 235 -CAAQTKA-TFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKRFD 292
Query: 803 QQDQTHSSVVSTLLALM---DGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+ V T+L L+ DG + V VI ATNR + +DPAL R GR D++I FP+P
Sbjct: 293 SEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMP 352
Query: 860 SMEDRAAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIALKR 913
+ E RA I+ +H+ + V+ + + +A F GA +A+C +A +IAL+R
Sbjct: 353 NEEARARIMQIHSRKMN--VSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRR 405
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 404 (147.3 bits), Expect = 4.1e-33, Sum P(3) = 4.1e-33
Identities = 102/276 (36%), Positives = 149/276 (53%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
+ L+D+ + ++ L P+ F LGL P GVLL G PG GKTL+ +A+
Sbjct: 582 IGALEDIREELTMAILFLLCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVAN----- 636
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQT 807
+ + + + KG + L YVG++ER +R +FQ A+ P +IFFDE+D L P R+ ++
Sbjct: 637 ESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSARETGA 696
Query: 808 HSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAI 867
VV+ LL MDGL++R V ++ ATNRP+ +DPA+ RPGR D+ ++ LP DR AI
Sbjct: 697 SVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAI 756
Query: 868 LSLHTERWPKPVTGS--LLKWIAA--RTAGFAGADLQALCTQAAIIALKRNFPLQEILSA 923
L T+ KP + L+ IA R + GADL AL +A+I ALK+ Q+ S
Sbjct: 757 LKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALKQEMARQKSGSE 816
Query: 924 AAEKAFCSK------RVTLPSFAVEERDWLEALSCS 953
E K + S + E+R EAL S
Sbjct: 817 KGELKISQKHFEEAFKKVKSSISKEDRAMYEALQWS 852
Score = 389 (142.0 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 97/234 (41%), Positives = 132/234 (56%)
Query: 685 FESVAGLQDVIRCMKEV--VILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIG 742
FE V G D +KEV +++ + +PE + +LG+ PPRGVLLHG PG GKTL+ A+ G
Sbjct: 263 FEDVGG-NDTT--LKEVCKMLVHMRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAG 319
Query: 743 SCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTR 802
D I A + + G++E++LR LF+ A P I+F DEID + P R
Sbjct: 320 EL---DLPILKVA--ATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKREI 374
Query: 803 QQDQTHSSVVSTLLALMDGLKSRGS---VVVIGATNRPEAVDPALRRPGRFDREIYFPLP 859
+V+ LL MD L + + V+VIGATNRP+++DPALRR GRFDREI +P
Sbjct: 375 ASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIP 434
Query: 860 SMEDRAAILSLHTERWPKPVTGSLLKWIAARTAGFAGADLQALCTQAAIIALKR 913
R IL + P T + +A T GF GADL ALC +AA+ A+ R
Sbjct: 435 DEASRERILQTLCRKLRLPETFHF-RHLAHLTPGFVGADLMALCREAAMCAVNR 487
Score = 49 (22.3 bits), Expect = 4.1e-33, Sum P(3) = 4.1e-33
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 25 KKHKRLDAICEEEYAKNHGEPNEDDDEAAETGSAARNLE 63
K+HK L A E+E+ E+D+E E+ S ++E
Sbjct: 70 KEHKDL-AELEDEHLAKRARHGEEDNEYTESYSDDSSME 107
Score = 39 (18.8 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 1110 VLISGSPGSGQRHLA 1124
VL++G PG G+ LA
Sbjct: 617 VLLAGPPGCGKTLLA 631
Score = 38 (18.4 bits), Expect = 4.1e-33, Sum P(3) = 4.1e-33
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 526 PEVYFAGLGCLKNIRAAL 543
P V +A +G L++IR L
Sbjct: 575 PNVTWADIGALEDIREEL 592
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 394 (143.8 bits), Expect = 4.5e-33, P = 4.5e-33
Identities = 92/228 (40%), Positives = 132/228 (57%)
Query: 688 VAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSCARG 747
+ GL + ++E++ LPL YP LGL PRGVLL G PG GKT +VRA+ G
Sbjct: 192 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREA--G 249
Query: 748 DKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQ---PSIIFFDEIDGLAPCRTRQQ 804
+ +A A G G+ E +R +F A + P+++F DE+D L P R
Sbjct: 250 AELLAVSAPA---LQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRRGGAH 306
Query: 805 DQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDR 864
S V+ +L L+DG++ VVV+ +TNRP+A+DPALRRPGRFDRE+ P+++ R
Sbjct: 307 RAPESRAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQR 366
Query: 865 AAILSLHTERWPKPVTGSL-LKWIAARTAGFAGADLQALCTQAAIIAL 911
AIL + T + P ++ + L +A T G+ GADL ALC +AA+ AL
Sbjct: 367 KAILQVITSKMP--ISSQVDLSLLAEMTVGYVGADLTALCREAALHAL 412
Score = 225 (84.3 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 53/142 (37%), Positives = 82/142 (57%)
Query: 685 FESVAGLQDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGSC 744
+E + GL+DV +K+ + PL +P F +GLT P+GVLL+G PG KT +VRAL SC
Sbjct: 455 WEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSC 514
Query: 745 ARGDKRIAYFARKGADCLGKYVGDAERQL--RLLFQVAEKCQPSIIFFDEIDGLAPCRT- 801
++ + GAD +VGD+E+ L + +F+ A P+I+F DEID + R+
Sbjct: 515 -----HCSFVSVSGADLFSPFVGDSEKVLSQQKVFRQARANTPAIVFLDEIDSILGSRSI 569
Query: 802 -RQQDQTHSSVVSTLLALMDGL 822
+ + V+S LL +DG+
Sbjct: 570 SKTECNVQERVLSVLLNELDGV 591
Score = 194 (73.4 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 49/124 (39%), Positives = 69/124 (55%)
Query: 827 SVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSMEDRAAILSLHTERWPKPVTGSLLKW 886
+V+++ ATNRP+ +D AL RPGR D+ IY P P + R +IL + T+ P SL
Sbjct: 615 NVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLEN- 673
Query: 887 IAARTAGFAGADLQALCTQAAIIALKRNFPLQEILSAAAEKAFCSKRVTLPSFAVEERDW 946
IAA T F+GADL LC +AA++AL+ N E + E S + PS + E+
Sbjct: 674 IAAETCFFSGADLGNLCKEAALLALQENG--LEATTVKQEHFLKSLKTVKPSLSPEDLTL 731
Query: 947 LEAL 950
E L
Sbjct: 732 YENL 735
WARNING: HSPs involving 522 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.135 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1167 1077 0.00085 123 3 11 22 0.43 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 772
No. of states in DFA: 629 (67 KB)
Total size of DFA: 502 KB (2231 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 100.90u 0.12s 101.02t Elapsed: 00:00:07
Total cpu time: 100.96u 0.12s 101.08t Elapsed: 00:00:07
Start: Fri May 10 03:14:28 2013 End: Fri May 10 03:14:35 2013
WARNINGS ISSUED: 2