BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001068
(1166 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/844 (41%), Positives = 515/844 (61%), Gaps = 36/844 (4%)
Query: 123 WFQLPNGNWELGKILS--ISGTESV-ISLPEGK----VLKVKSENLVSA-NPDILDGVDD 174
W P W+ ++L G + + + L EGK L K++ L NPDIL G +D
Sbjct: 14 WIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDILVGEND 73
Query: 175 LMQLSYLNEPSVLYNLHYRY-KQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSI- 232
L LSYL+EP+VL+NL R+ +IYT G VLVAINP++++P+YG I AY +++
Sbjct: 74 LTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMG 133
Query: 233 -ESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGS---GIE 288
PH++A+ + A ++M RDE NQSII+SGESGAGKT +AK AM+Y A + G + +E
Sbjct: 134 DMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASEANVE 193
Query: 289 YEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCA 348
++L +NPI+E+ GNAKT+RNDNSSRFGK IEI F + +I GAN++T+LLEKSRVV A
Sbjct: 194 EKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQA 253
Query: 349 EGERAYHIFYQLCVGAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALD 408
E ER YHIFYQLC A + L L +A + Y +Q I+G+DDA++ +A
Sbjct: 254 EEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACT 313
Query: 409 IVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKL 468
++ +S Q +F +LA +L LGNV F D+++ P + L L+G D E+
Sbjct: 314 LLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAH 373
Query: 469 ALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRS 528
L RK+ +T ++ ++ A + RDALAK IYA LF W+V+ +NK+L ++
Sbjct: 374 WLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHS-F 432
Query: 529 ISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDN 588
I +LDIYGFE+F+ NSFEQFCINYANE+LQQ FN H+FKLEQEEY+++ I W +DF DN
Sbjct: 433 IGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDN 492
Query: 589 KDCLNLFEKPLGLLSLLDEESTFPNGTDLTFANKL-KQHLNSNPCFRGER--DKSFTVSH 645
+ C+NL E +G+L LLDEE P G+D T+A KL HLN F R +K+F + H
Sbjct: 493 QPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKH 552
Query: 646 YAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCH--LPQIF-------------ASNMLS 690
+A +V Y GFLEKN+D ++ + I++L S LP++F S +
Sbjct: 553 FADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVP 612
Query: 691 QSNKPVVGPLYKAG-GADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGL 749
S PV + G + K +V +F+ L LM+ L +TTPH++RCIKPN+F+ P
Sbjct: 613 LSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFT 672
Query: 750 YEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAIL 809
+++ +QQLR CGVLE +RIS +GFP+R ++Q+F RY L+ + D +L
Sbjct: 673 FDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVL 732
Query: 810 HQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLH-GILRVQSCFRGHQARLCLKELRR 868
+ + + YQ G TK+FFRAGQ+ LE R L +R+Q RG R +RR
Sbjct: 733 EKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRR 792
Query: 869 GIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIKSRVARQKLKNIKYSSIMIQSVIRG 928
+ +Q ++RG + R YA L+R RAA++IQ+ + V R++ + ++ ++I +Q+++RG
Sbjct: 793 AAITIQRYVRGHQARC-YATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRG 851
Query: 929 WLVR 932
+LVR
Sbjct: 852 YLVR 855
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 608 bits (1567), Expect = e-174, Method: Compositional matrix adjust.
Identities = 329/728 (45%), Positives = 467/728 (64%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 227 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDIYGFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDIYGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 606 bits (1563), Expect = e-173, Method: Compositional matrix adjust.
Identities = 328/728 (45%), Positives = 467/728 (64%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 227 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDIYGFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDIYGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE ++ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQ 750
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 605 bits (1561), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/732 (44%), Positives = 468/732 (63%), Gaps = 34/732 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 46 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 105
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 106 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 165
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 166 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 225
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 226 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 285
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 286 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 345
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 346 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 403
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 404 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 461
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 462 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 521
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 522 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 581
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 582 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 630
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 631 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 690
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 691 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 749
Query: 833 IGMLEDTRNRTL 844
+ +E+ R + L
Sbjct: 750 LARIEEAREQRL 761
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 605 bits (1560), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/732 (44%), Positives = 468/732 (63%), Gaps = 34/732 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 58 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 117
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 118 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 177
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 178 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 237
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 238 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 297
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 298 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 357
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 358 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 415
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 416 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 473
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 474 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 533
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 534 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 593
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 594 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 642
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 643 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 702
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 703 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 761
Query: 833 IGMLEDTRNRTL 844
+ +E+ R + L
Sbjct: 762 LARIEEAREQRL 773
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 605 bits (1560), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/732 (44%), Positives = 468/732 (63%), Gaps = 34/732 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 58 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 117
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 118 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 177
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 178 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 237
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 238 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 297
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 298 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 357
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 358 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 415
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 416 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 473
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 474 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 533
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 534 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 593
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 594 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 642
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 643 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 702
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 703 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 761
Query: 833 IGMLEDTRNRTL 844
+ +E+ R + L
Sbjct: 762 LARIEEAREQRL 773
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 605 bits (1560), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/736 (44%), Positives = 470/736 (63%), Gaps = 34/736 (4%)
Query: 130 NWELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYN 189
++E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +N
Sbjct: 57 SYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHN 116
Query: 190 LHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIRE 247
L RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R
Sbjct: 117 LRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRS 176
Query: 248 MIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAF 301
M+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAF
Sbjct: 177 MLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAF 236
Query: 302 GNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLC 361
GNAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 237 GNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLL 296
Query: 362 VGAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVF 421
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 297 AGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIF 356
Query: 422 AMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGND 480
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 357 KIIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 414
Query: 481 TIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESF 540
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 415 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIF 472
Query: 541 DRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--K 597
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +
Sbjct: 473 KVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQ 532
Query: 598 PLGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDT 654
P G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 533 PPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEI 592
Query: 655 TGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSV 713
+LEKN+D L D +EL S + N++++ N P + K G + ++V
Sbjct: 593 QDWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITV 641
Query: 714 ATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRS 773
A ++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R
Sbjct: 642 AAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 701
Query: 774 GFPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAG 831
GFP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAG
Sbjct: 702 GFPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAG 760
Query: 832 QIGMLEDTRNRTLHGI 847
Q+ +E+ R + + I
Sbjct: 761 QLARIEEAREQRISEI 776
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 605 bits (1559), Expect = e-173, Method: Compositional matrix adjust.
Identities = 328/728 (45%), Positives = 466/728 (64%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 227 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 605 bits (1559), Expect = e-173, Method: Compositional matrix adjust.
Identities = 329/735 (44%), Positives = 469/735 (63%), Gaps = 34/735 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 58 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 117
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 118 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 177
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 178 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 237
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 238 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 297
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 298 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 357
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 358 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 415
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 416 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 473
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 474 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 533
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 534 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 593
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 594 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 642
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 643 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 702
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 703 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 761
Query: 833 IGMLEDTRNRTLHGI 847
+ +E+ R + + I
Sbjct: 762 LARIEEAREQRISEI 776
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 604 bits (1558), Expect = e-173, Method: Compositional matrix adjust.
Identities = 328/728 (45%), Positives = 466/728 (64%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 227 NAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 604 bits (1558), Expect = e-173, Method: Compositional matrix adjust.
Identities = 328/728 (45%), Positives = 466/728 (64%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 227 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDIEGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 604 bits (1557), Expect = e-172, Method: Compositional matrix adjust.
Identities = 327/728 (44%), Positives = 466/728 (64%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+N+SRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 227 NAKTTRNNNASRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 603 bits (1556), Expect = e-172, Method: Compositional matrix adjust.
Identities = 327/728 (44%), Positives = 466/728 (64%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTSDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 227 NAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE ++ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQ 750
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 603 bits (1555), Expect = e-172, Method: Compositional matrix adjust.
Identities = 327/728 (44%), Positives = 466/728 (64%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 227 NAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FK+EQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 603 bits (1555), Expect = e-172, Method: Compositional matrix adjust.
Identities = 327/728 (44%), Positives = 465/728 (63%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 46 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 105
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 106 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 165
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 166 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 225
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 226 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 285
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 286 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 345
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 346 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 403
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 404 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 461
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 462 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 521
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 522 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 581
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 582 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 630
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC VLE +RI+R G
Sbjct: 631 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNAVLEGIRITRKG 690
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 691 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 749
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 750 LARIEEAR 757
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 603 bits (1554), Expect = e-172, Method: Compositional matrix adjust.
Identities = 336/780 (43%), Positives = 483/780 (61%), Gaps = 46/780 (5%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSS FGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 227 NAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D ++F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--SERKAYFIGVLDISGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FK+EQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 833 IGMLEDTRNRTLHGILRVQSCF-----------RGHQARLCLKELRRGIVALQSFIRGEK 881
+ +E+ R + L G + +S + QA L ++ I ++QSF+ K
Sbjct: 751 LARIEEAREQRL-GSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHK 809
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 602 bits (1553), Expect = e-172, Method: Compositional matrix adjust.
Identities = 327/728 (44%), Positives = 466/728 (64%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 227 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--EERKAYFIGVLDIEGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE ++ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQ 750
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 602 bits (1551), Expect = e-172, Method: Compositional matrix adjust.
Identities = 329/732 (44%), Positives = 466/732 (63%), Gaps = 34/732 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 46 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 105
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK +P+Y ++ +K + +PH++AI+D A R M
Sbjct: 106 RVRYNQDLIYTYSGLFLVAVNPFKIIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 165
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 166 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 225
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 226 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 285
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 286 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 345
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 346 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 403
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV +IN L + R I +LDI GFE F
Sbjct: 404 VAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLC--QERKAYFIGVLDISGFEIFK 461
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 462 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 521
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 522 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 581
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 582 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 630
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 631 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 690
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 691 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 749
Query: 833 IGMLEDTRNRTL 844
+ +E+ R + L
Sbjct: 750 LARIEEAREQRL 761
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 601 bits (1549), Expect = e-172, Method: Compositional matrix adjust.
Identities = 327/728 (44%), Positives = 465/728 (63%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 46 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 105
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 106 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 165
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 166 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 225
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 226 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 285
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 286 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 345
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 346 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 403
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 404 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 461
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 462 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 521
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 522 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 581
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 582 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 630
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC VLE +RI+R G
Sbjct: 631 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNVVLEGIRITRKG 690
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 691 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 749
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 750 LARIEEAR 757
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 601 bits (1549), Expect = e-172, Method: Compositional matrix adjust.
Identities = 326/728 (44%), Positives = 464/728 (63%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 227 NAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D ++F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--SERAAYFIGVLDISGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FK+EQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 597 bits (1538), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/728 (44%), Positives = 462/728 (63%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTSDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV + ER YHIFYQL
Sbjct: 227 NAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTTERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D ++F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--SERKAYFIGVLDISGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FK+EQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + L+VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFLTVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEAIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY + L +V ++D + A+L NI PE ++ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQ 750
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 596 bits (1537), Expect = e-170, Method: Compositional matrix adjust.
Identities = 332/781 (42%), Positives = 472/781 (60%), Gaps = 35/781 (4%)
Query: 123 WFQLPNGNWELGKILS--ISGTESV-ISLPEGK----VLKVKSENLVSA-NPDILDGVDD 174
W P W+ ++L G + + + L EGK L K++ L NPDIL G +D
Sbjct: 14 WIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDILVGEND 73
Query: 175 LMQLSYLNEPSVLYNLHYRY-KQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSI- 232
L LSYL+EP+VL+NL R+ +IYT G VLVAINP++++P+YG I AY +++
Sbjct: 74 LTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMG 133
Query: 233 -ESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGS---GIE 288
PH++A+ + A ++M RDE NQSII+SGESGAGKT +AK AM+Y A + G + +E
Sbjct: 134 DMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASEANVE 193
Query: 289 YEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCA 348
++L +NPI+E+ GNAKT+RNDNSSRFGK IEI F + +I GAN++T+LLEKSRVV A
Sbjct: 194 EKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQA 253
Query: 349 EGERAYHIFYQLCVGAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALD 408
E ER YHIFYQLC A + L L +A + Y +Q I+G+DDA++ +A
Sbjct: 254 EEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACT 313
Query: 409 IVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKL 468
++ +S Q +F +LA +L LGNV F D+++ P + L L+G D E+
Sbjct: 314 LLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAH 373
Query: 469 ALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRS 528
L RK+ +T ++ ++ A + RDALAK IYA LF W+V+ +NK+L ++
Sbjct: 374 WLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHS-F 432
Query: 529 ISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDN 588
I +LDIYGFE+F+ NSFEQFCINYANE+LQQ FN H+FKLEQEEY+++ I W +DF DN
Sbjct: 433 IGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDN 492
Query: 589 KDCLNLFEKPLGLLSLLDEESTFPNGTDLTFANKL-KQHLNSNPCFRGER--DKSFTVSH 645
+ C+NL E +G+L LLDEE P G+D T+A KL HLN F R +K+F + H
Sbjct: 493 QPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKH 552
Query: 646 YAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCH--LPQIF-------------ASNMLS 690
+A +V Y GFLEKN+D ++ + I++L S LP++F S +
Sbjct: 553 FADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVP 612
Query: 691 QSNKPVVGPLYKAG-GADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGL 749
S PV + G + K +V +F+ L LM+ L +TTPH++RCIKPN+F+ P
Sbjct: 613 LSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFT 672
Query: 750 YEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAIL 809
+++ +QQLR CGVLE +RIS +GFP+R ++Q+F RY L+ + D +L
Sbjct: 673 FDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVL 732
Query: 810 HQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLH-GILRVQSCFRGHQARLCLKELRR 868
+ + + YQ G TK+FFRAGQ+ LE R L +R+Q RG R +RR
Sbjct: 733 EKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRR 792
Query: 869 G 869
G
Sbjct: 793 G 793
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 596 bits (1536), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/728 (44%), Positives = 462/728 (63%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTSDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV + ER YHIFYQL
Sbjct: 227 NAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTTERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D E+F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEEEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--SERKAYFIGVLDISGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FK+EQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY + L +V ++D + A+L NI PE ++ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQ 750
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 593 bits (1530), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/728 (44%), Positives = 462/728 (63%), Gaps = 34/728 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 47 YECGEIVSETSDSFTFKTSDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 106
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 107 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 166
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 167 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 226
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV + ER YHIFYQL
Sbjct: 227 NAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTSERNYHIFYQLLA 286
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D ++F+I +A+DIV S+E+Q S+F
Sbjct: 287 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFK 346
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--SERKAYFIGVLDISGFEIFK 462
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FK+EQE+Y+++ I+W +DF D++ ++L + +P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + L+VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFLTVA 631
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 775 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 832
FP R+ + F +RY + L +V ++D + A+L NI PE ++ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQ 750
Query: 833 IGMLEDTR 840
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 586 bits (1511), Expect = e-167, Method: Compositional matrix adjust.
Identities = 323/751 (43%), Positives = 460/751 (61%), Gaps = 34/751 (4%)
Query: 123 WFQLPNGNWELGKILS--ISGTESV-ISLPEGK----VLKVKSENLVSA-NPDILDGVDD 174
W P W+ ++L G + + + L EGK L K++ L NPDIL G +D
Sbjct: 14 WIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDILVGEND 73
Query: 175 LMQLSYLNEPSVLYNLHYRY-KQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSI- 232
L LSYL+EP+VL+NL R+ +IYT G VLVAINP++++P+YG I AY +++
Sbjct: 74 LTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMG 133
Query: 233 -ESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGS---GIE 288
PH++A+ + A ++M RDE NQSII+SGESGAGKT +AK AM+Y A + G + +E
Sbjct: 134 DMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASEANVE 193
Query: 289 YEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCA 348
++L +NPI+E+ GNAKT+RNDNSSRFGK IEI F + +I GAN++T+LLEKSRVV A
Sbjct: 194 EKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQA 253
Query: 349 EGERAYHIFYQLCVGAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALD 408
E ER YHIFYQLC A + L L +A + Y +Q I+G+DDA++ +A
Sbjct: 254 EEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACT 313
Query: 409 IVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKL 468
++ +S Q +F +LA +L LGNV F D+++ P + L L+G D E+
Sbjct: 314 LLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAH 373
Query: 469 ALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRS 528
L RK+ +T ++ ++ A + RDALAK IYA LF W+V+ +NK+L ++
Sbjct: 374 WLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHS-F 432
Query: 529 ISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDN 588
I +LDIYGFE+F+ NSFEQFCINYANE+LQQ FN H+FKLEQEEY+++ I W +DF DN
Sbjct: 433 IGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDN 492
Query: 589 KDCLNLFEKPLGLLSLLDEESTFPNGTDLTFANKL-KQHLNSNPCFRGER--DKSFTVSH 645
+ C+NL E +G+L LLDEE P G+D T+A KL HLN F R +K+F + H
Sbjct: 493 QPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKH 552
Query: 646 YAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCH--LPQIF-------------ASNMLS 690
+A +V Y GFLEKN+D ++ + I++L S LP++F S +
Sbjct: 553 FADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVP 612
Query: 691 QSNKPVVGPLYKAG-GADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGL 749
S PV + G + K +V +F+ L LM+ L +TTPH++RCIKPN+F+ P
Sbjct: 613 LSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFT 672
Query: 750 YEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAIL 809
+++ +QQLR CGVLE +RIS +GFP+R ++Q+F RY L+ + D +L
Sbjct: 673 FDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVL 732
Query: 810 HQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 840
+ + + YQ G TK+FFRAGQ+ LE R
Sbjct: 733 EKLILDKDKYQFGKTKIFFRAGQVAYLEKIR 763
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 561 bits (1446), Expect = e-160, Method: Compositional matrix adjust.
Identities = 303/662 (45%), Positives = 427/662 (64%), Gaps = 31/662 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 46 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 105
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK++P+Y ++ +K + +PH++AI+D A R M
Sbjct: 106 RVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 165
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 166 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 225
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 226 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 285
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 286 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 345
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 346 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 403
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDIYGFE F
Sbjct: 404 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDIYGFEIFK 461
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 462 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 521
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 522 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 581
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 582 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 630
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 631 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 690
Query: 775 FP 776
FP
Sbjct: 691 FP 692
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 556 bits (1433), Expect = e-158, Method: Compositional matrix adjust.
Identities = 303/665 (45%), Positives = 426/665 (64%), Gaps = 31/665 (4%)
Query: 131 WELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNL 190
+E G+I+S + +G+ +VK ++ NP DGV+D+ +LSYLNEP+V +NL
Sbjct: 46 YECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAVFHNL 105
Query: 191 HYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTAIREM 248
RY QD+IYT +G LVA+NPFK +P+Y ++ +K + +PH++AI+D A R M
Sbjct: 106 RVRYNQDLIYTYSGLFLVAVNPFKIIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSM 165
Query: 249 IRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG-----GSGI-EYEILKTNPILEAFG 302
+ D NQS++I+GESGAGKTE K +QYLA++ G GSG+ E +IL+ NPILEAFG
Sbjct: 166 LDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFG 225
Query: 303 NAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCV 362
NAKT+RN+NSSRFGK IEI F+ G ISGA+IQ++LLEKSRVV +E ER YHIFYQL
Sbjct: 226 NAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLA 285
Query: 363 GAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFA 422
GA ++ L+L + + YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F
Sbjct: 286 GATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFK 345
Query: 423 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 481
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 346 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 403
Query: 482 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 541
+ Q+L + +++ +RDAL K++Y LF WLV +IN L + R I +LDI GFE F
Sbjct: 404 VAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLC--QERKAYFIGVLDISGFEIFK 461
Query: 542 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE--KP 598
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + +P
Sbjct: 462 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 521
Query: 599 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 655
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 522 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 581
Query: 656 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 714
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 582 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 630
Query: 715 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 774
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 631 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 690
Query: 775 FPTRM 779
FP R+
Sbjct: 691 FPNRI 695
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 554 bits (1428), Expect = e-158, Method: Compositional matrix adjust.
Identities = 320/834 (38%), Positives = 469/834 (56%), Gaps = 82/834 (9%)
Query: 111 TTSYAGKKKLQSWFQLPNGNWELGKILSISGTESVISL-PEGKVLKVKSENLVSANPDIL 169
T ++ GKK W + +I S G E + + + VK +++ S NP
Sbjct: 25 TAAFDGKK--NCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKF 82
Query: 170 DGVDDLMQLSYLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAY-- 227
+ ++D+ ++YLNE SVLYNL RY +IYT +G +A+NP++++P+Y + I Y
Sbjct: 83 EKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRG 142
Query: 228 KSKSIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGG--- 284
K K+ PH++++ D A + M+ D NQS +I+GESGAGKTE K + YLA +
Sbjct: 143 KRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKK 202
Query: 285 ----------SGIEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANI 334
+E +I++ NP+LEA+GNAKT+RN+NSSRFGK I IHF TGKI+GA+I
Sbjct: 203 KDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADI 262
Query: 335 QTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALREKLNLM-SAKEYKYLRQSSCYSING 393
+T+LLEKSRV ER YHIFYQ+C A P L + + + + Y ++ Q C +++
Sbjct: 263 ETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDN 321
Query: 394 VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLI 453
+DD E+F++ EA DI+ +KE+++S+F A++L +G + F E E
Sbjct: 322 IDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAE 381
Query: 454 TVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQ 513
VA L G + G+L AL K++VG + + + ++Q ++ ALAKS+Y +F WLV +
Sbjct: 382 KVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRR 441
Query: 514 INKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEY 573
+NK+L +R I +LDI GFE FD NSFEQ CINY NERLQQ FN H+F LEQEEY
Sbjct: 442 VNKTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 500
Query: 574 IQDGIDWAKVDF-EDNKDCLNLFEKPLGLLSLLDEESTFPNGTDLTFANKLKQ-HLNSN- 630
++GI W +DF D + C++L EKP+G+LS+L+EE FP D +F +KL Q H+ N
Sbjct: 501 KKEGIAWEFIDFGMDLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNR 560
Query: 631 -------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQI 683
P + F + HYAG V Y TG+LEKN+D ++ + + LL +
Sbjct: 561 MFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGA-------- 612
Query: 684 FASNMLSQSNKPVVGPLYKA-----------GGADSQKLSVATKFKGQLFQLMQRLESTT 732
S +P+V L+KA G S +++ + L +LM+ L ST
Sbjct: 613 --------SKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTH 664
Query: 733 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 792
PHF+RCI PN + PGL + LVL QL+C GVLE +RI R GFP+R+ + +F +RY L
Sbjct: 665 PHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILA 724
Query: 793 LESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRV 850
++ D +VS IL + P Y++G TK+FF+AG +G LE+ R+ L I+
Sbjct: 725 PNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKII-- 782
Query: 851 QSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIK 904
S F+ H IRG IRK Y + + VIQR I+
Sbjct: 783 -SMFQAH-------------------IRGYLIRKAYKKLQDQRIGLSVIQRNIR 816
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 554 bits (1428), Expect = e-158, Method: Compositional matrix adjust.
Identities = 320/834 (38%), Positives = 469/834 (56%), Gaps = 82/834 (9%)
Query: 111 TTSYAGKKKLQSWFQLPNGNWELGKILSISGTESVISL-PEGKVLKVKSENLVSANPDIL 169
T ++ GKK W + +I S G E + + + VK +++ S NP
Sbjct: 20 TAAFDGKK--NCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKF 77
Query: 170 DGVDDLMQLSYLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAY-- 227
+ ++D+ ++YLNE SVLYNL RY +IYT +G +A+NP++++P+Y + I Y
Sbjct: 78 EKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRG 137
Query: 228 KSKSIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGG--- 284
K K+ PH++++ D A + M+ D NQS +I+GESGAGKTE K + YLA +
Sbjct: 138 KRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKK 197
Query: 285 ----------SGIEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANI 334
+E +I++ NP+LEA+GNAKT+RN+NSSRFGK I IHF TGKI+GA+I
Sbjct: 198 KDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADI 257
Query: 335 QTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALREKLNLM-SAKEYKYLRQSSCYSING 393
+T+LLEKSRV ER YHIFYQ+C A P L + + + + Y ++ Q C +++
Sbjct: 258 ETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDN 316
Query: 394 VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLI 453
+DD E+F++ EA DI+ +KE+++S+F A++L +G + F E E
Sbjct: 317 IDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAE 376
Query: 454 TVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQ 513
VA L G + G+L AL K++VG + + + ++Q ++ ALAKS+Y +F WLV +
Sbjct: 377 KVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRR 436
Query: 514 INKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEY 573
+NK+L +R I +LDI GFE FD NSFEQ CINY NERLQQ FN H+F LEQEEY
Sbjct: 437 VNKTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 495
Query: 574 IQDGIDWAKVDF-EDNKDCLNLFEKPLGLLSLLDEESTFPNGTDLTFANKLKQ-HLNSN- 630
++GI W +DF D + C++L EKP+G+LS+L+EE FP D +F +KL Q H+ N
Sbjct: 496 KKEGIAWEFIDFGMDLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNR 555
Query: 631 -------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQI 683
P + F + HYAG V Y TG+LEKN+D ++ + + LL +
Sbjct: 556 MFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGA-------- 607
Query: 684 FASNMLSQSNKPVVGPLYKA-----------GGADSQKLSVATKFKGQLFQLMQRLESTT 732
S +P+V L+KA G S +++ + L +LM+ L ST
Sbjct: 608 --------SKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTH 659
Query: 733 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 792
PHF+RCI PN + PGL + LVL QL+C GVLE +RI R GFP+R+ + +F +RY L
Sbjct: 660 PHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILA 719
Query: 793 LESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRV 850
++ D +VS IL + P Y++G TK+FF+AG +G LE+ R+ L I+
Sbjct: 720 PNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKII-- 777
Query: 851 QSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIK 904
S F+ H IRG IRK Y + + VIQR I+
Sbjct: 778 -SMFQAH-------------------IRGYLIRKAYKKLQDQRIGLSVIQRNIR 811
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 554 bits (1427), Expect = e-157, Method: Compositional matrix adjust.
Identities = 320/834 (38%), Positives = 469/834 (56%), Gaps = 82/834 (9%)
Query: 111 TTSYAGKKKLQSWFQLPNGNWELGKILSISGTESVISL-PEGKVLKVKSENLVSANPDIL 169
T ++ GKK W + +I S G E + + + VK +++ S NP
Sbjct: 25 TAAFDGKK--NCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKF 82
Query: 170 DGVDDLMQLSYLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAY-- 227
+ ++D+ ++YLNE SVLYNL RY +IYT +G +A+NP++++P+Y + I Y
Sbjct: 83 EKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRG 142
Query: 228 KSKSIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGG--- 284
K K+ PH++++ D A + M+ D NQS +I+GESGAGKTE K + YLA +
Sbjct: 143 KRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKK 202
Query: 285 ----------SGIEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANI 334
+E +I++ NP+LEA+GNAKT+RN+NSSRFGK I IHF TGKI+GA+I
Sbjct: 203 KDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADI 262
Query: 335 QTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALREKLNLM-SAKEYKYLRQSSCYSING 393
+T+LLEKSRV ER YHIFYQ+C A P L + + + + Y ++ Q C +++
Sbjct: 263 ETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDN 321
Query: 394 VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLI 453
+DD E+F++ EA DI+ +KE+++S+F A++L +G + F E E
Sbjct: 322 IDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAE 381
Query: 454 TVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQ 513
VA L G + G+L AL K++VG + + + ++Q ++ ALAKS+Y +F WLV +
Sbjct: 382 KVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRR 441
Query: 514 INKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEY 573
+NK+L +R I +LDI GFE FD NSFEQ CINY NERLQQ FN H+F LEQEEY
Sbjct: 442 VNKTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 500
Query: 574 IQDGIDWAKVDF-EDNKDCLNLFEKPLGLLSLLDEESTFPNGTDLTFANKLKQ-HLNSN- 630
++GI W +DF D + C++L EKP+G+LS+L+EE FP D +F +KL Q H+ N
Sbjct: 501 KKEGIAWEFIDFGMDLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNR 560
Query: 631 -------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQI 683
P + F + HYAG V Y TG+LEKN+D ++ + + LL +
Sbjct: 561 MFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGA-------- 612
Query: 684 FASNMLSQSNKPVVGPLYKA-----------GGADSQKLSVATKFKGQLFQLMQRLESTT 732
S +P+V L+KA G S +++ + L +LM+ L ST
Sbjct: 613 --------SKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTH 664
Query: 733 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 792
PHF+RCI PN + PGL + LVL QL+C GVLE +RI R GFP+R+ + +F +RY L
Sbjct: 665 PHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILA 724
Query: 793 LESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRV 850
++ D +VS IL + P Y++G TK+FF+AG +G LE+ R+ L I+
Sbjct: 725 PNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKII-- 782
Query: 851 QSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIK 904
S F+ H IRG IRK Y + + VIQR I+
Sbjct: 783 -SMFQAH-------------------IRGYLIRKAYKKLQDQRIGLSVIQRNIR 816
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 554 bits (1427), Expect = e-157, Method: Compositional matrix adjust.
Identities = 320/834 (38%), Positives = 469/834 (56%), Gaps = 82/834 (9%)
Query: 111 TTSYAGKKKLQSWFQLPNGNWELGKILSISGTESVISL-PEGKVLKVKSENLVSANPDIL 169
T ++ GKK W + +I S G E + + + VK +++ S NP
Sbjct: 25 TAAFDGKK--NCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKF 82
Query: 170 DGVDDLMQLSYLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAY-- 227
+ ++D+ ++YLNE SVLYNL RY +IYT +G +A+NP++++P+Y + I Y
Sbjct: 83 EKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRG 142
Query: 228 KSKSIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGG--- 284
K K+ PH++++ D A + M+ D NQS +I+GESGAGKTE K + YLA +
Sbjct: 143 KRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKK 202
Query: 285 ----------SGIEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANI 334
+E +I++ NP+LEA+GNAKT+RN+NSSRFGK I IHF TGKI+GA+I
Sbjct: 203 KDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADI 262
Query: 335 QTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALREKLNLM-SAKEYKYLRQSSCYSING 393
+T+LLEKSRV ER YHIFYQ+C A P L + + + + Y ++ Q C +++
Sbjct: 263 ETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDN 321
Query: 394 VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLI 453
+DD E+F++ EA DI+ +KE+++S+F A++L +G + F E E
Sbjct: 322 IDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAE 381
Query: 454 TVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQ 513
VA L G + G+L AL K++VG + + + ++Q ++ ALAKS+Y +F WLV +
Sbjct: 382 KVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRR 441
Query: 514 INKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEY 573
+NK+L +R I +LDI GFE FD NSFEQ CINY NERLQQ FN H+F LEQEEY
Sbjct: 442 VNKTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 500
Query: 574 IQDGIDWAKVDF-EDNKDCLNLFEKPLGLLSLLDEESTFPNGTDLTFANKLKQ-HLNSN- 630
++GI W +DF D + C++L EKP+G+LS+L+EE FP D +F +KL Q H+ N
Sbjct: 501 KKEGIAWEFIDFGMDLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNR 560
Query: 631 -------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQI 683
P + F + HYAG V Y TG+LEKN+D ++ + + LL +
Sbjct: 561 MFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGA-------- 612
Query: 684 FASNMLSQSNKPVVGPLYKA-----------GGADSQKLSVATKFKGQLFQLMQRLESTT 732
S +P+V L+KA G S +++ + L +LM+ L ST
Sbjct: 613 --------SKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTH 664
Query: 733 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 792
PHF+RCI PN + PGL + LVL QL+C GVLE +RI R GFP+R+ + +F +RY L
Sbjct: 665 PHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILA 724
Query: 793 LESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRV 850
++ D +VS IL + P Y++G TK+FF+AG +G LE+ R+ L I+
Sbjct: 725 PNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKII-- 782
Query: 851 QSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIK 904
S F+ H IRG IRK Y + + VIQR I+
Sbjct: 783 -SMFQAH-------------------IRGYLIRKAYKKLQDQRIGLSVIQRNIR 816
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 554 bits (1427), Expect = e-157, Method: Compositional matrix adjust.
Identities = 320/834 (38%), Positives = 469/834 (56%), Gaps = 82/834 (9%)
Query: 111 TTSYAGKKKLQSWFQLPNGNWELGKILSISGTESVISL-PEGKVLKVKSENLVSANPDIL 169
T ++ GKK W + +I S G E + + + VK +++ S NP
Sbjct: 21 TAAFDGKK--NCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKF 78
Query: 170 DGVDDLMQLSYLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAY-- 227
+ ++D+ ++YLNE SVLYNL RY +IYT +G +A+NP++++P+Y + I Y
Sbjct: 79 EKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRG 138
Query: 228 KSKSIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGG--- 284
K K+ PH++++ D A + M+ D NQS +I+GESGAGKTE K + YLA +
Sbjct: 139 KRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKK 198
Query: 285 ----------SGIEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANI 334
+E +I++ NP+LEA+GNAKT+RN+NSSRFGK I IHF TGKI+GA+I
Sbjct: 199 KDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADI 258
Query: 335 QTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALREKLNLM-SAKEYKYLRQSSCYSING 393
+T+LLEKSRV ER YHIFYQ+C A P L + + + + Y ++ Q C +++
Sbjct: 259 ETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDN 317
Query: 394 VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLI 453
+DD E+F++ EA DI+ +KE+++S+F A++L +G + F E E
Sbjct: 318 IDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAE 377
Query: 454 TVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQ 513
VA L G + G+L AL K++VG + + + ++Q ++ ALAKS+Y +F WLV +
Sbjct: 378 KVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRR 437
Query: 514 INKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEY 573
+NK+L +R I +LDI GFE FD NSFEQ CINY NERLQQ FN H+F LEQEEY
Sbjct: 438 VNKTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 496
Query: 574 IQDGIDWAKVDF-EDNKDCLNLFEKPLGLLSLLDEESTFPNGTDLTFANKLKQ-HLNSN- 630
++GI W +DF D + C++L EKP+G+LS+L+EE FP D +F +KL Q H+ N
Sbjct: 497 KKEGIAWEFIDFGMDLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNR 556
Query: 631 -------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQI 683
P + F + HYAG V Y TG+LEKN+D ++ + + LL +
Sbjct: 557 MFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGA-------- 608
Query: 684 FASNMLSQSNKPVVGPLYKA-----------GGADSQKLSVATKFKGQLFQLMQRLESTT 732
S +P+V L+KA G S +++ + L +LM+ L ST
Sbjct: 609 --------SKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTH 660
Query: 733 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 792
PHF+RCI PN + PGL + LVL QL+C GVLE +RI R GFP+R+ + +F +RY L
Sbjct: 661 PHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILA 720
Query: 793 LESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRV 850
++ D +VS IL + P Y++G TK+FF+AG +G LE+ R+ L I+
Sbjct: 721 PNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKII-- 778
Query: 851 QSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIK 904
S F+ H IRG IRK Y + + VIQR I+
Sbjct: 779 -SMFQAH-------------------IRGYLIRKAYKKLQDQRIGLSVIQRNIR 812
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 539 bits (1388), Expect = e-153, Method: Compositional matrix adjust.
Identities = 310/825 (37%), Positives = 461/825 (55%), Gaps = 61/825 (7%)
Query: 111 TTSYAGKKKLQSWFQLPNGNWELGKILSISGTESVISL-PEGKVLKVKSENLVSANPDIL 169
T + GKK W P + +I S G E + + + VK +++ NP
Sbjct: 25 TAPFDGKK--NCWVPDPKEGFASAEIQSSKGEEITVKIVSDNSTRTVKKDDIQQMNPPKF 82
Query: 170 DGVDDLMQLSYLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAY-- 227
+ ++D+ ++YLNE SVL NL RY +IYT +G +A+NP++++P+Y + I Y
Sbjct: 83 EKLEDMANMTYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRG 142
Query: 228 KSKSIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGG--- 284
K K+ PH++++ D A + M+ D NQS +I+GESGAGKTE K + YLA +
Sbjct: 143 KRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKK 202
Query: 285 ------------SGIEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGA 332
+E +I++ NP+LEA+GNAKT+RN+NSSRFGK I IHF TGKI+GA
Sbjct: 203 KTSEEEEADQKKGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGA 262
Query: 333 NIQTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALREKLNLM-SAKEYKYLRQSSCYSI 391
+I+T+LLEKSRV ER YHIFYQ+C A P L E + + + Y ++ Q C ++
Sbjct: 263 DIETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTV 321
Query: 392 NGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEG 451
+ +DD E+F++ EA DI+ +KE++ S+F A++L +G + F E E
Sbjct: 322 DNIDDVEEFKLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQAESDGTAE 381
Query: 452 LITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLV 511
VA L G + G+L AL K++VG + + + L Q ++ AL+KS+Y +F WLV
Sbjct: 382 AEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLV 441
Query: 512 EQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQE 571
+++N++L +R I +LDI GFE FD NSFEQ CINY NERLQQ FN H+F LEQE
Sbjct: 442 KRVNRTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQE 500
Query: 572 EYIQDGIDWAKVDF-EDNKDCLNLFEKPLGLLSLLDEESTFPNGTDLTFAN-KLKQHLNS 629
EY ++GI W +DF D + C++L EKP+G+LS+L+EE FP D +F + + H+
Sbjct: 501 EYKKEGIQWEFIDFGMDLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDYSYQNHIGK 560
Query: 630 N--------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLP 681
N P + F + HYAG V Y G+L+KN+D ++ + + LL+
Sbjct: 561 NRMFTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSK---- 616
Query: 682 QIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKP 741
+ + + ++P G K S +++ + L +LM+ L ST PHF+RCI P
Sbjct: 617 EPLVAELFRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIP 676
Query: 742 NNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQ-- 799
N + PGL + LVL QL+C GVLE +RI R GFP+R+ + +F +RY L ++
Sbjct: 677 NELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFV 736
Query: 800 DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQA 859
D +VS IL + P Y++G TK+FF+AG +G LE+ R+ L I+ S F+ H
Sbjct: 737 DGKTVSEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKII---SMFQAH-- 791
Query: 860 RLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIK 904
IRG IRK Y + + VIQR I+
Sbjct: 792 -----------------IRGYLIRKAYKKLQDQRIGLSVIQRNIR 819
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 536 bits (1381), Expect = e-152, Method: Compositional matrix adjust.
Identities = 309/784 (39%), Positives = 449/784 (57%), Gaps = 37/784 (4%)
Query: 127 PNGNWELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSV 186
P ++ G I S G + + G+ L VK + + S NP D ++D+ +++L+EP+V
Sbjct: 40 PKESFVKGTIQSKEGGKVTVKTEGGETLTVKEDQVFSMNPPKYDKIEDMAMMTHLHEPAV 99
Query: 187 LYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIES--PHVYAITDTA 244
LYNL RY MIYT +G V +NP+K +P+Y + AY+ K + PH+++I+D A
Sbjct: 100 LYNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYNPKVVLAYRGKKRQEAPPHIFSISDNA 159
Query: 245 IREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGG--------SG-----IEYEI 291
+ M+ D NQSI+I+GESGAGKT K +QY A + SG +E +I
Sbjct: 160 YQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQI 219
Query: 292 LKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGE 351
+ NP+LEAFGNAKT RNDNSSRFGK I IHF TGK++ A+I+T+LLEKSRV E
Sbjct: 220 ISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAE 279
Query: 352 RAYHIFYQLCVGAPPALREKLNLMS-AKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIV 410
R+YHIFYQ+ P L + L + + +Y Y+ Q ++ +DD E+ A+DI+
Sbjct: 280 RSYHIFYQIMSNKKPELIDMLLITTNPYDYHYVSQGEI-TVPSIDDQEELMATDSAIDIL 338
Query: 411 HVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLAL 470
S +++ +++ + AV+ GN+ F E EP E A L+G + EL AL
Sbjct: 339 GFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLMGLNSAELLKAL 398
Query: 471 STRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSIS 530
+++VGN+ + + T+SQ ++ ALAK++Y +F W+V +IN+ L + R I
Sbjct: 399 CYPRVKVGNEFVTKGQTVSQVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQPRQ-YFIG 457
Query: 531 ILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDF-EDNK 589
+LDI GFE FD NSFEQ CIN+ NE+LQQ FN H+F LEQEEY ++GI+W +DF D
Sbjct: 458 VLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLA 517
Query: 590 DCLNLFEKPLGLLSLLDEESTFPNGTDLTFANKL-KQHLNSNPCF------RGERDKSFT 642
C+ L EKP+G+ S+L+EE FP TD +F NKL QHL + F +G+ + F+
Sbjct: 518 ACIELIEKPMGIFSILEEECMFPKATDTSFKNKLYDQHLGKSNNFQKPKPAKGKAEAHFS 577
Query: 643 VSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCH-LPQIFASNMLSQSNKPVVGPLY 701
+ HYAG V Y+ +G+LEKN+D L+ I L S L +FA+
Sbjct: 578 LVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGGEAEGGGGKK--- 634
Query: 702 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 761
S +V+ F+ L +LM L ST PHF+RCI PN ++PG E LVL QLRC
Sbjct: 635 GGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRC 694
Query: 762 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS---QDPLSVSVAILHQFNILPEM 818
GVLE +RI R GFP+R+ + F +RY L ++ D S +L ++
Sbjct: 695 NGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGSIDVDHTQ 754
Query: 819 YQVGYTKLFFRAGQIGMLEDTRNRTLHGIL-RVQSCFRGHQARLCLK---ELRRGIVALQ 874
Y+ G+TK+FF+AG +G+LE+ R+ L I+ R Q+ RG R+ + E R I +Q
Sbjct: 755 YRFGHTKVFFKAGLLGLLEEMRDDKLAEIITRTQARCRGFLMRVEYRRMVERRESIFCIQ 814
Query: 875 SFIR 878
+R
Sbjct: 815 YNVR 818
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 536 bits (1380), Expect = e-152, Method: Compositional matrix adjust.
Identities = 310/824 (37%), Positives = 459/824 (55%), Gaps = 60/824 (7%)
Query: 111 TTSYAGKKKLQSWFQLPNGNWELGKILSISGTESVISL-PEGKVLKVKSENLVSANPDIL 169
T + GKK W P + +I S G E + + + VK +++ NP
Sbjct: 25 TAPFDGKK--NCWVPDPKEGFASAEIQSSKGEEITVKIVSDNSTRTVKKDDIQQMNPPKF 82
Query: 170 DGVDDLMQLSYLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAY-- 227
+ ++D+ ++YLNE SVL NL RY +IYT +G +A+NP++++P+Y + I Y
Sbjct: 83 EKLEDMANMTYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRG 142
Query: 228 KSKSIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG---- 283
K K+ PH++++ D A + M+ D NQS +I+GESGAGKTE+ K + Y A +
Sbjct: 143 KRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTESTKKVIMYFARVAANLYK 202
Query: 284 ----------GSGIEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGAN 333
S +E +I++ NP+LEAFGNAKT RN+NSSRFGK I IHF TGKI+GA+
Sbjct: 203 QKEEPVPNLRASNLEDQIIEANPVLEAFGNAKTVRNNNSSRFGKFIRIHFGPTGKIAGAD 262
Query: 334 IQTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALREKLNLM-SAKEYKYLRQSSCYSIN 392
I+T+LLEKSRV ER YHIFYQ+C A P L E + + + Y ++ Q C +++
Sbjct: 263 IETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVD 321
Query: 393 GVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGL 452
+DD E+F++ EA DI+ +KE++ S+F A++L +G + F E E
Sbjct: 322 NIDDVEEFKLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQAESDGTAEA 381
Query: 453 ITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVE 512
VA L G + G+L AL K++VG + + + L Q ++ AL+KS+Y +F WLV+
Sbjct: 382 EKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVK 441
Query: 513 QINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEE 572
++N++L +R I +LDI GFE FD NSFEQ CINY NERLQQ FN H+F LEQEE
Sbjct: 442 RVNRTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEE 500
Query: 573 YIQDGIDWAKVDF-EDNKDCLNLFEKPLGLLSLLDEESTFPNGTDLTFAN-KLKQHLNSN 630
Y ++GI W +DF D + C++L EKP+G+LS+L+EE FP D +F + + H+ N
Sbjct: 501 YKKEGIQWEFIDFGMDLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDYSYQNHIGKN 560
Query: 631 --------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQ 682
P + F + HYAG V Y G+L+KN+D ++ + + LL+ +
Sbjct: 561 RMFTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSK----E 616
Query: 683 IFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPN 742
+ + ++P G K S +++ + L +LM L T PHF+RCI PN
Sbjct: 617 PLVAELFRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMCNLRRTNPHFVRCIIPN 676
Query: 743 NFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQ--D 800
+ PGL + LVL QL+C GVLE +RI R GFP+R+ + +F +RY L ++ D
Sbjct: 677 LEKDPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVD 736
Query: 801 PLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQAR 860
+VS IL + P Y++G TK+FF+AG +G LE+ R+ L I+ S F+ H
Sbjct: 737 GKTVSEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKII---SMFQAH--- 790
Query: 861 LCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIK 904
IRG IRK Y + + VIQR I+
Sbjct: 791 ----------------IRGYLIRKAYKKLQDQRIGLSVIQRNIR 818
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 525 bits (1351), Expect = e-149, Method: Compositional matrix adjust.
Identities = 309/812 (38%), Positives = 462/812 (56%), Gaps = 46/812 (5%)
Query: 104 TDRRWSDTTSYAGKKKLQSWFQLPNGNWELGKILSISGTESVISLPEGKVLKV-KSENLV 162
T ++ + TS K W P+ + +I S G E + + + +V K +++
Sbjct: 16 TRQKLMEATSIPFDGKKNCWVPDPDFGFVGAEIQSTKGDEVTVKTDKTQETRVVKKDDIG 75
Query: 163 SANPDILDGVDDLMQLSYLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNY 222
NP + D+ L++LNE S+L+NL RY+ IYT +G +AINP++++P+Y
Sbjct: 76 QRNPPKFEMNMDMANLTFLNEASILHNLRSRYESGFIYTYSGLFCIAINPYRRLPIYTQG 135
Query: 223 YIEAYKSK--SIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAA 280
++ Y+ K + PH+++I D A + M++D NQS++I+GESGAGKTE K +QY A
Sbjct: 136 LVDKYRGKRRAEMPPHLFSIADNAYQYMLQDRENQSMLITGESGAGKTENTKKVIQYFAL 195
Query: 281 LGGG------------------SGIEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIH 322
+ +E +I++ NP+LEA+GNAKT+RN+NSSRFGK I IH
Sbjct: 196 VAASLAGKKDKKEEEKKKDEKKGTLEDQIVQCNPVLEAYGNAKTTRNNNSSRFGKFIRIH 255
Query: 323 FSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALREK-LNLMSAKEYK 381
F GKI+GA+I+T+LLEKSRV ER YHIFYQL A P EK L + Y
Sbjct: 256 FGTQGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQLLSPAFPENIEKILAVPDPGLYG 315
Query: 382 YLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNE 441
++ Q + +++G+DD E+ + A D++ + E++ S++ +L LG + + +
Sbjct: 316 FINQGTL-TVDGIDDEEEMGLTDTAFDVLGFTDEEKLSMYKCTGCILHLGEMKWKQRGEQ 374
Query: 442 NHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKS 501
+ A+ VA L+G + G+L L K++VG + + Q Q T++ ALAKS
Sbjct: 375 AEADGTAEAE--KVAFLLGVNAGDLLKCLLKPKIKVGTEYVTQGRNKDQVTNSIAALAKS 432
Query: 502 IYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHF 561
+Y +F WLV ++N++L +R I +LDI GFE FD NSFEQ CINY NERLQQ F
Sbjct: 433 LYDRMFNWLVRRVNQTLDTKAKRQ-FFIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFF 491
Query: 562 NRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKPLGLLSLLDEESTFPNGTDLTFA 620
N H+F LEQEEY ++GI W +DF D + C+ L EKP+G+LS+L+EE FP +D +F
Sbjct: 492 NHHMFVLEQEEYKKEGIVWEFIDFGLDLQACIELIEKPMGILSILEEECMFPKASDTSFK 551
Query: 621 NKL-KQHLNSNPCF-------RGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 672
NKL HL NP F G + F + HYAG V Y G+L+KN+D ++ + +EL
Sbjct: 552 NKLYDNHLGKNPMFGKPKPPKAGCAEAHFCLHHYAGSVSYSIAGWLDKNKDPINENVVEL 611
Query: 673 LSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTT 732
L + + + ML + + K G + ++++ K L +LM+ L ST
Sbjct: 612 LQNSKEPIVK-----MLFTPPRILTPGGKKKKGKSAAFQTISSVHKESLNKLMKNLYSTH 666
Query: 733 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 792
PHF+RCI PN ++PGL + LVL QLRC GVLE +RI R GFP R+ + +F +RY L
Sbjct: 667 PHFVRCIIPNELKTPGLIDAALVLHQLRCNGVLEGIRICRKGFPNRIIYSEFKQRYSILA 726
Query: 793 LESVAS--QDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRV 850
+V S D V+ L + P Y++G TK+FF+AG +GMLED R+ L I+ +
Sbjct: 727 PNAVPSGFADGKVVTDKALSALQLDPNEYRLGNTKVFFKAGVLGMLEDMRDERLSKIISM 786
Query: 851 -QSCFRGHQARLCLKEL---RRGIVALQSFIR 878
Q+ RG+ R K+L R G+ +Q +R
Sbjct: 787 FQAHIRGYLMRKAYKKLQDQRIGLTLIQRNVR 818
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 523 bits (1348), Expect = e-148, Method: Compositional matrix adjust.
Identities = 291/737 (39%), Positives = 434/737 (58%), Gaps = 30/737 (4%)
Query: 134 GKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNLHYR 193
KI+S G + GK + VK + ++ NP D ++D+ L++L+EP+VLYNL R
Sbjct: 49 AKIVSREGGKVTAETEYGKTVTVKEDQVMQQNPPKFDKIEDMAMLTFLHEPAVLYNLKDR 108
Query: 194 YKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSK--SIESPHVYAITDTAIREMIRD 251
Y MIYT +G V +NP+K +P+Y + AY+ K S PH+++I+D A + M+ D
Sbjct: 109 YGSWMIYTYSGLFCVTVNPYKWLPVYTPEVVAAYRGKKRSEAPPHIFSISDNAYQYMLTD 168
Query: 252 EVNQSIIISGESGAGKTETAKIAMQY---LAALG---------GGSGIEYEILKTNPILE 299
NQSI+I+GESGAGKT K +QY +AA+G G +E +I++ NP LE
Sbjct: 169 RENQSILITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKDQSPGKGTLEDQIIQANPALE 228
Query: 300 AFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQ 359
AFGNAKT RNDNSSRFGK I IHF TGK++ A+I+T+LLEKSRV+ + ER YHIFYQ
Sbjct: 229 AFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERDYHIFYQ 288
Query: 360 LCVGAPPALREKLNLM-SAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQE 418
+ P L + L + + +Y ++ Q ++ +DDAE+ A D++ + E++
Sbjct: 289 ILSNKKPELLDMLLITNNPYDYAFISQGET-TVASIDDAEELMATDNAFDVLGFTSEEKN 347
Query: 419 SVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVG 478
S++ + A++ GN+ F + E EP E A L+G + +L L +++VG
Sbjct: 348 SMYKLTGAIMHFGNMKFKLKQREEQAEPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVG 407
Query: 479 NDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFE 538
N+ + + + Q ALAK++Y +F W+V +IN +L + R I +LDI GFE
Sbjct: 408 NEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLETKQPRQ-YFIGVLDIAGFE 466
Query: 539 SFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDF-EDNKDCLNLFEK 597
FD NSFEQ CIN+ NE+LQQ FN H+F LEQEEY ++GI+W +DF D + C++L EK
Sbjct: 467 IFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEK 526
Query: 598 PLGLLSLLDEESTFPNGTDLTFANKL-KQHLNSNPCF------RGERDKSFTVSHYAGEV 650
P+G++S+L+EE FP TD+TF KL HL + F +G+ + F++ HYAG V
Sbjct: 527 PMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYAGIV 586
Query: 651 IYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQK 710
Y+ G+L+KN+D L+ + L S L +N + ++ P+ KA S +
Sbjct: 587 DYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFAN-YAGADAPIEKGKGKAKKGSSFQ 645
Query: 711 LSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRI 770
+V+ + L +LM L ST PHF+RCI PN +SPG+ + LV+ QLRC GVLE +RI
Sbjct: 646 -TVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRI 704
Query: 771 SRSGFPTRMSHQKFARRYGFLLLESVASQ---DPLSVSVAILHQFNILPEMYQVGYTKLF 827
R GFP R+ + F +RY L ++ D + +L +I Y+ G+TK+F
Sbjct: 705 CRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDIDHNQYKFGHTKVF 764
Query: 828 FRAGQIGMLEDTRNRTL 844
F+AG +G+LE+ R+ L
Sbjct: 765 FKAGLLGLLEEMRDERL 781
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 513 bits (1321), Expect = e-145, Method: Compositional matrix adjust.
Identities = 309/831 (37%), Positives = 451/831 (54%), Gaps = 62/831 (7%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLPE-GKVLKVKSENLVSANPDILDGVDDLMQLSYL 181
W +E I G E + L E GK + + +++ NP V+D+ +L+ L
Sbjct: 35 WVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMAELTCL 94
Query: 182 NEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIES--PHVYA 239
NE SVL+NL RY +IYT +G V INP+K++P+Y I+ YK K PH+YA
Sbjct: 95 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 154
Query: 240 ITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSG------------- 286
I DTA R M++D +QSI+ +GESGAGKTE K +QYLA +
Sbjct: 155 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSF 214
Query: 287 ----IEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKS 342
+E ++L+ NPILEAFGNAKT +NDNSSRFGK I I+F TG I GANI+T+LLEKS
Sbjct: 215 SYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKS 274
Query: 343 RVVQCAEGERAYHIFYQLCVGAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRI 402
R ++ A+ ER +HIFY L GA +R L L Y +L I D E F+
Sbjct: 275 RAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDEMFQE 333
Query: 403 VVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCD 462
+EA+ I+ ++E+Q S+ ++++VL LGN+ F N + + V L+G +
Sbjct: 334 TLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGIN 393
Query: 463 IGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGK 522
+ + ++ T +++VG D + + T QA +ALAK+ + LF W++ ++NK+L K
Sbjct: 394 VTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTK 453
Query: 523 RRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAK 582
R+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQEEY ++GI+W
Sbjct: 454 RQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF 513
Query: 583 VDFE-DNKDCLNLFEKPL---GLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGE-- 636
+DF D + C+ L E+P G+L+LLDEE FP TD +F KL Q ++ F+
Sbjct: 514 IDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQ 573
Query: 637 -RDKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNM-----L 689
+DK+ F + HYAG+V Y+ + +L KN D L+ + LL+ S ++ L
Sbjct: 574 LKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGL 633
Query: 690 SQSNKPVVGPLYKAGGADSQKL-SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPG 748
Q K L A +V +K QL +LM L +T P+F+RCI PN+ + G
Sbjct: 634 DQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 749 LYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSV 806
+ LVL+QLRC GVLE +RI R GFP R+ Q+F +RY L ++ D +
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACI 753
Query: 807 AILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKEL 866
++ + P +Y++G +K+FFR G + LE+ R+ + +
Sbjct: 754 LMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDV------------------- 794
Query: 867 RRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIKSRVARQKLKNIKY 917
I+A Q+ RG RK +A Q+ A VIQR A KL+N ++
Sbjct: 795 ---IIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNC---AAYLKLRNWQW 839
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 512 bits (1319), Expect = e-145, Method: Compositional matrix adjust.
Identities = 309/831 (37%), Positives = 451/831 (54%), Gaps = 62/831 (7%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLPE-GKVLKVKSENLVSANPDILDGVDDLMQLSYL 181
W +E I G E + L E GK + + +++ NP V+D+ +L+ L
Sbjct: 35 WVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMAELTCL 94
Query: 182 NEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIES--PHVYA 239
NE SVL+NL RY +IYT +G V INP+K++P+Y I+ YK K PH+YA
Sbjct: 95 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 154
Query: 240 ITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSG------------- 286
I DTA R M++D +QSI+ +GESGAGKTE K +QYLA +
Sbjct: 155 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSF 214
Query: 287 ----IEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKS 342
+E ++L+ NPILEAFGNAKT +NDNSSRFGK I I+F TG I GANI+T+LLEKS
Sbjct: 215 SYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKS 274
Query: 343 RVVQCAEGERAYHIFYQLCVGAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRI 402
R ++ A+ ER +HIFY L GA +R L L Y +L I D E F+
Sbjct: 275 RAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDEMFQE 333
Query: 403 VVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCD 462
+EA+ I+ ++E+Q S+ ++++VL LGN+ F N + + V L+G +
Sbjct: 334 TLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGIN 393
Query: 463 IGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGK 522
+ + ++ T +++VG D + + T QA +ALAK+ + LF W++ ++NK+L K
Sbjct: 394 VTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTK 453
Query: 523 RRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAK 582
R+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQEEY ++GI+W
Sbjct: 454 RQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF 513
Query: 583 VDFE-DNKDCLNLFEKPL---GLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGE-- 636
+DF D + C+ L E+P G+L+LLDEE FP TD +F KL Q ++ F+
Sbjct: 514 IDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQ 573
Query: 637 -RDKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNM-----L 689
+DK+ F + HYAG+V Y+ + +L KN D L+ + LL+ S ++ L
Sbjct: 574 LKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGL 633
Query: 690 SQSNKPVVGPLYKAGGADSQKL-SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPG 748
Q K L A +V +K QL +LM L +T P+F+RCI PN+ + G
Sbjct: 634 DQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 749 LYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSV 806
+ LVL+QLRC GVLE +RI R GFP R+ Q+F +RY L ++ D +
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACI 753
Query: 807 AILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKEL 866
++ + P +Y++G +K+FFR G + LE+ R+ + +
Sbjct: 754 LMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDV------------------- 794
Query: 867 RRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIKSRVARQKLKNIKY 917
I+A Q+ RG RK +A Q+ A VIQR A KL+N ++
Sbjct: 795 ---IIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNC---AAYLKLRNWQW 839
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 512 bits (1318), Expect = e-145, Method: Compositional matrix adjust.
Identities = 297/775 (38%), Positives = 434/775 (56%), Gaps = 38/775 (4%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLPE-GKVLKVKSENLVSANPDILDGVDDLMQLSYL 181
W +E I G E + L E GK + + +++ NP V+D+ +L+ L
Sbjct: 35 WVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMAELTCL 94
Query: 182 NEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIES--PHVYA 239
NE SVL+NL RY +IYT +G V INP+K++P+Y I+ YK K PH+YA
Sbjct: 95 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 154
Query: 240 ITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSG------------- 286
I DTA R M++D +QSI+ +GESGAGKTE K +QYLA +
Sbjct: 155 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSF 214
Query: 287 ----IEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKS 342
+E ++L+ NPILEAFGNAKT +NDNSSRFGK I I+F TG I GANI+T+LLEKS
Sbjct: 215 SYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKS 274
Query: 343 RVVQCAEGERAYHIFYQLCVGAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRI 402
R ++ A+ ER +HIFY L GA +R L L Y +L I D E F+
Sbjct: 275 RAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDEMFQE 333
Query: 403 VVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCD 462
+EA+ I+ ++E+Q S+ ++++VL LGN+ F N + + V L+G +
Sbjct: 334 TLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGIN 393
Query: 463 IGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGK 522
+ + ++ T +++VG D + + T QA +ALAK+ + LF W++ ++NK+L K
Sbjct: 394 VTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTK 453
Query: 523 RRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAK 582
R+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQEEY ++GI+W
Sbjct: 454 RQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF 513
Query: 583 VDFE-DNKDCLNLFEKPL---GLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGE-- 636
+DF D + C+ L E+P G+L+LLDEE FP TD +F KL Q ++ F+
Sbjct: 514 IDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQ 573
Query: 637 -RDKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNM-----L 689
+DK+ F + HYAG+V Y+ + +L KN D L+ + LL+ S ++ L
Sbjct: 574 LKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGL 633
Query: 690 SQSNKPVVGPLYKAGGADSQKL-SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPG 748
Q K L A +V +K QL +LM L +T P+F+RCI PN+ + G
Sbjct: 634 DQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 749 LYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSV 806
+ LVL+QLRC GVLE +RI R GFP R+ Q+F +RY L ++ D +
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACI 753
Query: 807 AILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRN-RTLHGILRVQSCFRGHQAR 860
++ + P +Y++G +K+FFR G + LE+ R+ + I+ Q+ RG+ AR
Sbjct: 754 LMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLAR 808
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 511 bits (1316), Expect = e-144, Method: Compositional matrix adjust.
Identities = 309/831 (37%), Positives = 451/831 (54%), Gaps = 62/831 (7%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLPE-GKVLKVKSENLVSANPDILDGVDDLMQLSYL 181
W +E I G E + L E GK + + +++ NP V+D+ +L+ L
Sbjct: 35 WVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMAELTCL 94
Query: 182 NEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIES--PHVYA 239
NE SVL+NL RY +IYT +G V INP+K++P+Y I+ YK K PH+YA
Sbjct: 95 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 154
Query: 240 ITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSG------------- 286
I DTA R M++D +QSI+ +GESGAGKTE K +QYLA +
Sbjct: 155 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSF 214
Query: 287 ----IEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKS 342
+E ++L+ NPILEAFGNAKT +NDNSSRFGK I I+F TG I GANI+T+LLEKS
Sbjct: 215 SYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKS 274
Query: 343 RVVQCAEGERAYHIFYQLCVGAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRI 402
R ++ A+ ER +HIFY L GA +R L L Y +L I D E F+
Sbjct: 275 RAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDEMFQE 333
Query: 403 VVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCD 462
+EA+ I+ ++E+Q S+ ++++VL LGN+ F N + + V L+G +
Sbjct: 334 TLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGIN 393
Query: 463 IGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGK 522
+ + ++ T +++VG D + + T QA +ALAK+ + LF W++ ++NK+L K
Sbjct: 394 VTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTK 453
Query: 523 RRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAK 582
R+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQEEY ++GI+W
Sbjct: 454 RQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF 513
Query: 583 VDFE-DNKDCLNLFEKPL---GLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGER- 637
+DF D + C+ L E+P G+L+LLDEE FP TD +F KL Q ++ F+ +
Sbjct: 514 IDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQ 573
Query: 638 --DKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNM-----L 689
DK+ F + HYAG+V Y+ + +L KN D L+ + LL+ S ++ L
Sbjct: 574 LKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGL 633
Query: 690 SQSNKPVVGPLYKAGGADSQKL-SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPG 748
Q K L A +V +K QL +LM L +T P+F+RCI PN+ + G
Sbjct: 634 DQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 749 LYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSV 806
+ LVL+QLRC GVLE +RI R GFP R+ Q+F +RY L ++ D +
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACI 753
Query: 807 AILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKEL 866
++ + P +Y++G +K+FFR G + LE+ R+ + +
Sbjct: 754 LMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDV------------------- 794
Query: 867 RRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIKSRVARQKLKNIKY 917
I+A Q+ RG RK +A Q+ A VIQR A KL+N ++
Sbjct: 795 ---IIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNC---AAYLKLRNWQW 839
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 507 bits (1305), Expect = e-143, Method: Compositional matrix adjust.
Identities = 297/775 (38%), Positives = 434/775 (56%), Gaps = 38/775 (4%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLPE-GKVLKVKSENLVSANPDILDGVDDLMQLSYL 181
W +E I G E + L E GK + + +++ NP V+D+ +L+ L
Sbjct: 35 WVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMAELTCL 94
Query: 182 NEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIES--PHVYA 239
NE SVL+NL RY +IYT +G V INP+K++P+Y I+ YK K PH+YA
Sbjct: 95 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 154
Query: 240 ITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSG------------- 286
I DTA R M++D +QSI+ +GESGAGKTE K +QYLA +
Sbjct: 155 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSF 214
Query: 287 ----IEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKS 342
+E ++L+ NPILEAFGNAKT +NDNSSRFGK I I+F TG I GANI+T+LLEKS
Sbjct: 215 SYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKS 274
Query: 343 RVVQCAEGERAYHIFYQLCVGAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRI 402
R ++ A+ ER +HIFY L GA +R L L Y +L I D E F+
Sbjct: 275 RAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDEMFQE 333
Query: 403 VVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCD 462
+EA+ I+ ++E+Q S+ ++++VL LGN+ F N + + V L+G +
Sbjct: 334 TLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGIN 393
Query: 463 IGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGK 522
+ + ++ T +++VG D + + T QA +ALAK+ + LF W++ ++NK+L K
Sbjct: 394 VTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTK 453
Query: 523 RRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAK 582
R+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQEEY ++GI+W
Sbjct: 454 RQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF 513
Query: 583 VDFE-DNKDCLNLFEKPL---GLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGE-- 636
+DF D + C+ L E+P G+L+LLDEE FP TD +F KL Q ++ F+
Sbjct: 514 IDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQ 573
Query: 637 -RDKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNM-----L 689
+DK+ F + HYAG+V Y+ + +L KN D L+ + LL+ S ++ L
Sbjct: 574 LKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGL 633
Query: 690 SQSNKPVVGPLYKAGGADSQKL-SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPG 748
Q K L A +V +K QL +LM L +T P+F+RCI PN+ + G
Sbjct: 634 DQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 749 LYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSV 806
+ LVL+QLRC GVLE +RI R GFP R+ Q+F +RY L ++ D +
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACI 753
Query: 807 AILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRN-RTLHGILRVQSCFRGHQAR 860
++ + P +Y++G +K+FFR G + LE+ R+ + I+ Q+ RG+ AR
Sbjct: 754 LMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLAR 808
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 504 bits (1297), Expect = e-142, Method: Compositional matrix adjust.
Identities = 298/807 (36%), Positives = 432/807 (53%), Gaps = 55/807 (6%)
Query: 127 PNGNWELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSV 186
P ++ G I S G + G+ L VK + + S NP D ++D+ +++L+EP+V
Sbjct: 43 PKQSFVXGTIQSXEGGXVTVXTEGGETLTVKEDQVFSMNPPXYDXIEDMAMMTHLHEPAV 102
Query: 187 LYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTA 244
LYNL RY MIYT +G V +NP+ +P+Y + AY+ K + PH+++I+D A
Sbjct: 103 LYNLXERYAAWMIYTYSGLFCVTVNPYXWLPVYNPXVVLAYRGKKRQEAPPHIFSISDNA 162
Query: 245 IREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGG--------SG-----IEYEI 291
+ M+ D NQSI+I+GESGAGKT +QY A + SG +E +I
Sbjct: 163 YQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQSGKMQGTLEDQI 222
Query: 292 LKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGE 351
+ NP+LEAFGNA T RNDNSSRFG I IHF TGK++ A+I+T+LLE SRV E
Sbjct: 223 ISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXSRVTFQLPAE 282
Query: 352 RAYHIFYQLCVGAPPALREKLNLMS-AKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIV 410
R+YHIFYQ+ P L + L + + +Y Y+ + ++ +DD E+ A+DI+
Sbjct: 283 RSYHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSIDDQEELMATDSAIDIL 341
Query: 411 HVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLAL 470
S ++ +++ + AV+ GN+ F E EP E A L+G + EL AL
Sbjct: 342 GFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLMGLNSAELLKAL 401
Query: 471 STRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSIS 530
++ VGN+ + T+S+ ++ ALA ++Y +F W+V +IN+ L + R I
Sbjct: 402 CYPRVGVGNEAVTXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQLDTKQPRQ-YFIG 460
Query: 531 ILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDF-EDNK 589
+LDI GFE FD NSFEQ CIN+ NE LQQ FN H+F LEQEEY +GI+W +DF D
Sbjct: 461 VLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEFIDFGMDLA 520
Query: 590 DCLNLFEKPLGLLSLLDEESTFPNGTDLTFANKL-KQHLNSNPCF------RGERDKSFT 642
C+ L E P+G+ S+L+EE FP TD +F N L +HL + F +G+ + F+
Sbjct: 521 ACIELIEXPMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPAKGKAEAHFS 580
Query: 643 VSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCH-LPQIFASNMLSQSNKPVVGPLY 701
+ HYAG V Y+ +G+LE N D L+ I L S L +FA+
Sbjct: 581 LVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLALLFATYGGEAEGGGGKK--- 637
Query: 702 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 761
S +V+ F+ L LM L ST PHF+RCI PN +PG E LVL QLRC
Sbjct: 638 GGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEHELVLHQLRC 697
Query: 762 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS---QDPLSVSVAILHQFNILPEM 818
GVLE +RI R GFP+R+ + F +RY L ++ D S +L ++
Sbjct: 698 NGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQ 757
Query: 819 YQVGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIR 878
Y G+T +FF AG +G+LE+ R+ L I I A Q+ R
Sbjct: 758 YAFGHTXVFFXAGLLGLLEEMRDDXLAEI----------------------ITATQARCR 795
Query: 879 GEKIRKEYALVLQRHRAAVVIQRQIKS 905
G +R EY +++R + IQ ++S
Sbjct: 796 GFLMRVEYRAMVERRESIFCIQYNVRS 822
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 503 bits (1296), Expect = e-142, Method: Compositional matrix adjust.
Identities = 298/807 (36%), Positives = 432/807 (53%), Gaps = 55/807 (6%)
Query: 127 PNGNWELGKILSISGTESVISLPEGKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSV 186
P ++ G I S G + G+ L VK + + S NP D ++D+ +++L+EP+V
Sbjct: 40 PKQSFVXGTIQSXEGGXVTVXTEGGETLTVKEDQVFSMNPPXYDXIEDMAMMTHLHEPAV 99
Query: 187 LYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIE--SPHVYAITDTA 244
LYNL RY MIYT +G V +NP+ +P+Y + AY+ K + PH+++I+D A
Sbjct: 100 LYNLXERYAAWMIYTYSGLFCVTVNPYXWLPVYNPXVVLAYRGKKRQEAPPHIFSISDNA 159
Query: 245 IREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGG--------SG-----IEYEI 291
+ M+ D NQSI+I+GESGAGKT +QY A + SG +E +I
Sbjct: 160 YQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQSGKMQGTLEDQI 219
Query: 292 LKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGE 351
+ NP+LEAFGNA T RNDNSSRFG I IHF TGK++ A+I+T+LLE SRV E
Sbjct: 220 ISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXSRVTFQLPAE 279
Query: 352 RAYHIFYQLCVGAPPALREKLNLMS-AKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIV 410
R+YHIFYQ+ P L + L + + +Y Y+ + ++ +DD E+ A+DI+
Sbjct: 280 RSYHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSIDDQEELMATDSAIDIL 338
Query: 411 HVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLAL 470
S ++ +++ + AV+ GN+ F E EP E A L+G + EL AL
Sbjct: 339 GFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLMGLNSAELLKAL 398
Query: 471 STRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSIS 530
++ VGN+ + T+S+ ++ ALA ++Y +F W+V +IN+ L + R I
Sbjct: 399 CYPRVGVGNEAVTXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQLDTKQPRQ-YFIG 457
Query: 531 ILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDF-EDNK 589
+LDI GFE FD NSFEQ CIN+ NE LQQ FN H+F LEQEEY +GI+W +DF D
Sbjct: 458 VLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEFIDFGMDLA 517
Query: 590 DCLNLFEKPLGLLSLLDEESTFPNGTDLTFANKL-KQHLNSNPCF------RGERDKSFT 642
C+ L E P+G+ S+L+EE FP TD +F N L +HL + F +G+ + F+
Sbjct: 518 ACIELIEXPMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPAKGKAEAHFS 577
Query: 643 VSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCH-LPQIFASNMLSQSNKPVVGPLY 701
+ HYAG V Y+ +G+LE N D L+ I L S L +FA+
Sbjct: 578 LVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLALLFATYGGEAEGGGGKK--- 634
Query: 702 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 761
S +V+ F+ L LM L ST PHF+RCI PN +PG E LVL QLRC
Sbjct: 635 GGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEHELVLHQLRC 694
Query: 762 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS---QDPLSVSVAILHQFNILPEM 818
GVLE +RI R GFP+R+ + F +RY L ++ D S +L ++
Sbjct: 695 NGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQ 754
Query: 819 YQVGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIR 878
Y G+T +FF AG +G+LE+ R+ L I I A Q+ R
Sbjct: 755 YAFGHTXVFFXAGLLGLLEEMRDDXLAEI----------------------ITATQARCR 792
Query: 879 GEKIRKEYALVLQRHRAAVVIQRQIKS 905
G +R EY +++R + IQ ++S
Sbjct: 793 GFLMRVEYRAMVERRESIFCIQYNVRS 819
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust.
Identities = 291/755 (38%), Positives = 424/755 (56%), Gaps = 37/755 (4%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLPE-GKVLKVKSENLVSANPDILDGVDDLMQLSYL 181
W +E I G E + L E GK + + +++ NP V+D+ +L+ L
Sbjct: 35 WVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMAELTCL 94
Query: 182 NEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAYKSKSIES--PHVYA 239
NE SVL+NL RY +IYT +G V INP+K++P+Y I+ YK K PH+YA
Sbjct: 95 NEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYA 154
Query: 240 ITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSG------------- 286
I DTA R M++D +QSI+ +GESGAGKTE K +QYLA +
Sbjct: 155 IADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSF 214
Query: 287 ----IEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKS 342
+E ++L+ NPILEAFGNAKT +NDNSSRFGK I I+F TG I GANI+T+LLEKS
Sbjct: 215 SYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKS 274
Query: 343 RVVQCAEGERAYHIFYQLCVGAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRI 402
R ++ A+ ER +HIFY L GA +R L L Y +L I D E F+
Sbjct: 275 RAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDDEMFQE 333
Query: 403 VVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCD 462
+EA+ I+ ++E+Q S+ ++++VL LGN+ F N + + V L+G +
Sbjct: 334 TLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGIN 393
Query: 463 IGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGK 522
+ + ++ T +++VG D + + T QA +ALAK+ + LF W++ ++NK+L K
Sbjct: 394 VTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTK 453
Query: 523 RRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAK 582
R+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQEEY ++GI+W
Sbjct: 454 RQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF 513
Query: 583 VDFE-DNKDCLNLFEKPL---GLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGE-- 636
+DF D + C+ L E+P G+L+LLDEE FP TD +F KL Q ++ F+
Sbjct: 514 IDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQ 573
Query: 637 -RDKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNM-----L 689
+DK+ F + HYAG+V Y+ + +L KN D L+ + LL+ S ++ L
Sbjct: 574 LKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGL 633
Query: 690 SQSNKPVVGPLYKAGGADSQKL-SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPG 748
Q K L A +V +K QL +LM L +T P+F+RCI PN+ + G
Sbjct: 634 DQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAG 693
Query: 749 LYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSV 806
+ LVL+QLRC GVLE +RI R GFP R+ Q+F +RY L ++ D +
Sbjct: 694 KLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACI 753
Query: 807 AILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRN 841
++ + P +Y++G +K+FFR G + LE+ R+
Sbjct: 754 LMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERD 788
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 293/768 (38%), Positives = 425/768 (55%), Gaps = 44/768 (5%)
Query: 151 GKVLKVKSENLVSANPDILDGVDDLMQLSYLNEPSVLYNLHYRYKQDMIYTKAGPVLVAI 210
G+ L++ + + NP +D+ +L+ LNE SVL+NL RY +IYT +G V I
Sbjct: 41 GRRLRLPRDQIQRMNPPKFSKAEDMAELTCLNEASVLHNLRERYYSGLIYTYSGLFCVVI 100
Query: 211 NPFKKVPLYGNYYIEAYKSKSIES--PHVYAITDTAIREMIRDEVNQSIIISGESGAGKT 268
NP+K++P+Y +E Y+ K PHVYA+T+ A R M++D +QSI+ +GESGAGKT
Sbjct: 101 NPYKQLPIYTEAIVEMYRGKKRHEVPPHVYAVTEGAYRSMLQDREDQSILCTGESGAGKT 160
Query: 269 ETAKIAMQYLAAL----------GGGSGIEYEILKTNPILEAFGNAKTSRNDNSSRFGKL 318
E K +QYLA + G +E ++L+ NPILEAFGNAKT +NDNSSRFGK
Sbjct: 161 ENTKKVIQYLAHVASSPKGRKEPGVPGELERQLLQANPILEAFGNAKTVKNDNSSRFGKF 220
Query: 319 IEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALREKLNLMSAK 378
I I+F G I GANI+T+LLEKSR ++ A+ E ++HIFYQL GA L+ L L
Sbjct: 221 IRINFDVAGYIVGANIETYLLEKSRAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCS 280
Query: 379 EYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVI 438
Y++L S + E F+ +E+L ++ S E+ S+ M++AVL GN++
Sbjct: 281 HYRFLTNGPSSSPG--QERELFQETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRE 338
Query: 439 DNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 498
N + + + +L+G + + AL T +++VG D + + T QA +AL
Sbjct: 339 RNTDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEAL 398
Query: 499 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 558
AK+ Y LF WLV ++N++L R+ + ILDI GFE F NSFEQ CINY NE+LQ
Sbjct: 399 AKATYERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQ 458
Query: 559 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKPL---GLLSLLDEESTFPNG 614
Q FN +F LEQEEY ++GI W +DF D + C++L E+P GLL+LLDEE FP
Sbjct: 459 QLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKA 518
Query: 615 TDLTFANKLKQHLNSNPCF---RGERDKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSI 670
TD +F K+ Q +P F R RD++ F+V HYAG+V Y +L KN D L+ +
Sbjct: 519 TDKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVA 578
Query: 671 ELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL---------SVATKFKGQL 721
LL + L + + + + +VG + D +V +K L
Sbjct: 579 ALLHQSTDRL-----TAEIWKDVEGIVGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKESL 633
Query: 722 FQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSH 781
+LM L +T P F+RCI PN+ + G E LVL QLRC GVLE +RI R GFP R+
Sbjct: 634 SRLMATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILF 693
Query: 782 QKFARRYGFLLLESVAS--QDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLED- 838
Q+F +RY L ++ D ++ + P +Y+VG +K+FFRAG + LE+
Sbjct: 694 QEFRQRYEILTPNAIPKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEE 753
Query: 839 -----TRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEK 881
T++ L + QA L ++ I ++QSF+ K
Sbjct: 754 RASEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHK 801
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 461 bits (1186), Expect = e-130, Method: Compositional matrix adjust.
Identities = 278/740 (37%), Positives = 417/740 (56%), Gaps = 37/740 (5%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLP---EGKVLKVKSENLVSANPDILDGVDDLMQLS 179
W P +++G I+ I G +S+ P +GK + A D V+D L
Sbjct: 7 WAPHPTDGFQVGNIVDI-GPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 65
Query: 180 YLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVP-LYGNYYIEAYKSKSIES--PH 236
YLNE ++L+N+ RY +D IYT +L+A+NP+ +P +Y + I++Y+ KS+ + PH
Sbjct: 66 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 125
Query: 237 VYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLA-ALGGGSGIEYEILKTN 295
V+AI D A R+M +++QSII+SGESGAGKTE K ++YL + G G I+ I++ N
Sbjct: 126 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 185
Query: 296 PILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYH 355
P+LEAFGNAKT RN+NSSRFGK +EIHF+E + G + +LLEKSR+ + ER YH
Sbjct: 186 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 245
Query: 356 IFYQLCVGAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKE 415
IFY+LC GA +RE+L+L S ++YL + +DD F + A+ + + E
Sbjct: 246 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDE 305
Query: 416 DQESVFAMLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALST 472
++ +F ++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+T
Sbjct: 306 EKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTT 365
Query: 473 RKMRV----GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGR 527
R M T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ +
Sbjct: 366 RVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSY 423
Query: 528 SISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFED 587
I +LDI GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + D
Sbjct: 424 FIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVD 483
Query: 588 NKDCLNLFEKPL-GLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRG 635
N+DC++L E L G+L +LDEE+ P +D F + K K H S P R
Sbjct: 484 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 543
Query: 636 ER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNK 694
R D+ F + H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 544 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTN 599
Query: 695 PVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGL 754
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E
Sbjct: 600 NNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQ 657
Query: 755 VLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNI 814
+L QL+C G++ V+ + + GFP+R S + Y + + +A DP A+ +
Sbjct: 658 ILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGL 717
Query: 815 LPEMYQVGYTKLFFRAGQIG 834
Y+ G TK+FFR G+
Sbjct: 718 NEIDYKFGLTKVFFRPGKFA 737
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 461 bits (1186), Expect = e-130, Method: Compositional matrix adjust.
Identities = 278/740 (37%), Positives = 417/740 (56%), Gaps = 37/740 (5%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLP---EGKVLKVKSENLVSANPDILDGVDDLMQLS 179
W P +++G I+ I G +S+ P +GK + A D V+D L
Sbjct: 8 WAPHPTDGFQVGNIVDI-GPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 66
Query: 180 YLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVP-LYGNYYIEAYKSKSIES--PH 236
YLNE ++L+N+ RY +D IYT +L+A+NP+ +P +Y + I++Y+ KS+ + PH
Sbjct: 67 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 126
Query: 237 VYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLA-ALGGGSGIEYEILKTN 295
V+AI D A R+M +++QSII+SGESGAGKTE K ++YL + G G I+ I++ N
Sbjct: 127 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 186
Query: 296 PILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYH 355
P+LEAFGNAKT RN+NSSRFGK +EIHF+E + G + +LLEKSR+ + ER YH
Sbjct: 187 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 246
Query: 356 IFYQLCVGAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKE 415
IFY+LC GA +RE+L+L S ++YL + +DD F + A+ + + E
Sbjct: 247 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDE 306
Query: 416 DQESVFAMLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALST 472
++ +F ++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+T
Sbjct: 307 EKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTT 366
Query: 473 RKMRV----GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGR 527
R M T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ +
Sbjct: 367 RVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSY 424
Query: 528 SISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFED 587
I +LDI GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + D
Sbjct: 425 FIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVD 484
Query: 588 NKDCLNLFEKPL-GLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRG 635
N+DC++L E L G+L +LDEE+ P +D F + K K H S P R
Sbjct: 485 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 544
Query: 636 ER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNK 694
R D+ F + H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 545 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTN 600
Query: 695 PVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGL 754
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E
Sbjct: 601 NNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQ 658
Query: 755 VLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNI 814
+L QL+C G++ V+ + + GFP+R S + Y + + +A DP A+ +
Sbjct: 659 ILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGL 718
Query: 815 LPEMYQVGYTKLFFRAGQIG 834
Y+ G TK+FFR G+
Sbjct: 719 NEIDYKFGLTKVFFRPGKFA 738
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust.
Identities = 278/740 (37%), Positives = 416/740 (56%), Gaps = 37/740 (5%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLP---EGKVLKVKSENLVSANPDILDGVDDLMQLS 179
W P +++G I+ I G +S+ P +GK + A D V+D L
Sbjct: 7 WAPHPTDGFQVGNIVDI-GPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 65
Query: 180 YLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVP-LYGNYYIEAYKSKSIES--PH 236
YLNE ++L+N+ RY +D IYT +L+A+NP+ +P +Y + I++Y+ KS+ + PH
Sbjct: 66 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 125
Query: 237 VYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLA-ALGGGSGIEYEILKTN 295
V+AI D A R+M +++QSII+SGESGAGKTE K ++YL + G G I I++ N
Sbjct: 126 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIYDRIVEAN 185
Query: 296 PILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYH 355
P+LEAFGNAKT RN+NSSRFGK +EIHF+E + G + +LLEKSR+ + ER YH
Sbjct: 186 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 245
Query: 356 IFYQLCVGAPPALREKLNLMSAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKE 415
IFY+LC GA +RE+L+L S ++YL + +DD F + A+ + + E
Sbjct: 246 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDE 305
Query: 416 DQESVFAMLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALST 472
++ +F ++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+T
Sbjct: 306 EKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTT 365
Query: 473 RKMRV----GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGR 527
R M T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ +
Sbjct: 366 RVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSY 423
Query: 528 SISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFED 587
I +LDI GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + D
Sbjct: 424 FIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVD 483
Query: 588 NKDCLNLFEKPL-GLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRG 635
N+DC++L E L G+L +LDEE+ P +D F + K K H S P R
Sbjct: 484 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 543
Query: 636 ER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNK 694
R D+ F + H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 544 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTN 599
Query: 695 PVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGL 754
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E
Sbjct: 600 NNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQ 657
Query: 755 VLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNI 814
+L QL+C G++ V+ + + GFP+R S + Y + + +A DP A+ +
Sbjct: 658 ILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGL 717
Query: 815 LPEMYQVGYTKLFFRAGQIG 834
Y+ G TK+FFR G+
Sbjct: 718 NEIDYKFGLTKVFFRPGKFA 737
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 282/769 (36%), Positives = 422/769 (54%), Gaps = 63/769 (8%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLP---EGKVLKVKSENLVSANPDILDGVDDLMQLS 179
W P +++G I+ I G +S+ P +GK + A D V+D L
Sbjct: 7 WAPHPTDGFQVGNIVDI-GPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 65
Query: 180 YLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVP-LYGNYYIEAYKSKSIES--PH 236
YLNE ++L+N+ RY +D IYT +L+A+NP+ +P +Y + I++Y+ KS+ + PH
Sbjct: 66 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 125
Query: 237 VYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLA-ALGGGSGIEYEILKTN 295
V+AI D A R+M +++QSII+SGESGAGKTE K ++YL + G G I+ I++ N
Sbjct: 126 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 185
Query: 296 PILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYH 355
P+LEAFGNAKT RN+NSSRFGK +EIHF+E + G + +LLEKSR+ + ER YH
Sbjct: 186 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 245
Query: 356 IFYQLCVGAPPALREKLNLMSAKEYKYL-RQSSCYSIN---------------------- 392
IFY+LC GA +RE+L+L S ++YL R + Y N
Sbjct: 246 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 305
Query: 393 ---GVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEP 446
G+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++
Sbjct: 306 KDPGLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 365
Query: 447 VADEGLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKS 501
+ + L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK+
Sbjct: 366 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 425
Query: 502 IYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHF 561
+Y+ LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 426 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 483
Query: 562 NRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKPL-GLLSLLDEESTFPNGTDLTFA 620
N + K EQE Y ++G+ +V + DN+DC++L E L G+L +LDEE+ P +D F
Sbjct: 484 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 543
Query: 621 N----KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 668
+ K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 544 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS 603
Query: 669 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 728
L S C F + S KAG +SV KFK QL L+ +L
Sbjct: 604 ----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKL 657
Query: 729 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 788
ST FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y
Sbjct: 658 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 717
Query: 789 GFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLE 837
+ + +A DP A+ + Y+ G TK+FFR G+ +
Sbjct: 718 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 452 bits (1163), Expect = e-127, Method: Compositional matrix adjust.
Identities = 282/766 (36%), Positives = 421/766 (54%), Gaps = 63/766 (8%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLP---EGKVLKVKSENLVSANPDILDGVDDLMQLS 179
W P +++G I+ I G +S+ P +GK + A D V+D L
Sbjct: 8 WAPHPTDGFQVGNIVDI-GPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 66
Query: 180 YLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVP-LYGNYYIEAYKSKSIES--PH 236
YLNE ++L+N+ RY +D IYT +L+A+NP+ +P +Y + I++Y+ KS+ + PH
Sbjct: 67 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 126
Query: 237 VYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLA-ALGGGSGIEYEILKTN 295
V+AI D A R+M +++QSII+SGESGAGKTE K ++YL + G G I+ I++ N
Sbjct: 127 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 186
Query: 296 PILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYH 355
P+LEAFGNAKT RN+NSSRFGK +EIHF+E + G + +LLEKSR+ + ER YH
Sbjct: 187 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 246
Query: 356 IFYQLCVGAPPALREKLNLMSAKEYKYL--------------------RQSSCYSING-- 393
IFY+LC GA +RE+L+L S ++YL R+S Y G
Sbjct: 247 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 306
Query: 394 ----VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEP 446
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++
Sbjct: 307 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 366
Query: 447 VADEGLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKS 501
+ + L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK+
Sbjct: 367 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 426
Query: 502 IYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHF 561
+Y+ LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 427 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 484
Query: 562 NRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKPL-GLLSLLDEESTFPNGTDLTFA 620
N + K EQE Y ++G+ +V + DN+DC++L E L G+L +LDEE+ P +D F
Sbjct: 485 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 544
Query: 621 N----KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 668
+ K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 545 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS 604
Query: 669 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 728
L S C F + S KAG +SV KFK QL L+ +L
Sbjct: 605 ----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKL 658
Query: 729 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 788
ST FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y
Sbjct: 659 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 718
Query: 789 GFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 834
+ + +A DP A+ + Y+ G TK+FFR G+
Sbjct: 719 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 764
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 282/769 (36%), Positives = 422/769 (54%), Gaps = 63/769 (8%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLP---EGKVLKVKSENLVSANPDILDGVDDLMQLS 179
W P +++G I+ I G +S+ P +GK + A D V+D L
Sbjct: 4 WAPHPTDGFQVGNIVDI-GPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 62
Query: 180 YLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVP-LYGNYYIEAYKSKSIES--PH 236
YLNE ++L+N+ RY +D IYT +L+A+NP+ +P +Y + I++Y+ KS+ + PH
Sbjct: 63 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 122
Query: 237 VYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLA-ALGGGSGIEYEILKTN 295
V+AI D A R+M +++QSII+SGESGAGKTE K ++YL + G G I+ I++ N
Sbjct: 123 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 182
Query: 296 PILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYH 355
P+LEAFGNAKT RN+NSSRFGK +EIHF+E + G + +LLEKSR+ + ER YH
Sbjct: 183 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 242
Query: 356 IFYQLCVGAPPALREKLNLMSAKEYKYL--------------------RQSSCYSING-- 393
IFY+LC GA +RE+L+L S ++YL R+S Y G
Sbjct: 243 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 302
Query: 394 ----VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEP 446
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++
Sbjct: 303 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 362
Query: 447 VADEGLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKS 501
+ + L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK+
Sbjct: 363 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 422
Query: 502 IYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHF 561
+Y+ LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 423 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 480
Query: 562 NRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKPL-GLLSLLDEESTFPNGTDLTFA 620
N + K EQE Y ++G+ +V + DN+DC++L E L G+L +LDEE+ P +D F
Sbjct: 481 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 540
Query: 621 N----KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 668
+ K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 541 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS 600
Query: 669 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 728
L S C F + S KAG +SV KFK QL L+ +L
Sbjct: 601 ----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKL 654
Query: 729 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 788
ST FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y
Sbjct: 655 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 714
Query: 789 GFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLE 837
+ + +A DP A+ + Y+ G TK+FFR G+ +
Sbjct: 715 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 763
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 282/769 (36%), Positives = 422/769 (54%), Gaps = 63/769 (8%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLP---EGKVLKVKSENLVSANPDILDGVDDLMQLS 179
W P +++G I+ I G +S+ P +GK + A D V+D L
Sbjct: 7 WAPHPTDGFQVGNIVDI-GPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 65
Query: 180 YLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVP-LYGNYYIEAYKSKSIES--PH 236
YLNE ++L+N+ RY +D IYT +L+A+NP+ +P +Y + I++Y+ KS+ + PH
Sbjct: 66 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 125
Query: 237 VYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLA-ALGGGSGIEYEILKTN 295
V+AI D A R+M +++QSII+SGESGAGKTE K ++YL + G G I+ I++ N
Sbjct: 126 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 185
Query: 296 PILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYH 355
P+LEAFGNAKT RN+NSSRFGK +EIHF+E + G + +LLEKSR+ + ER YH
Sbjct: 186 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 245
Query: 356 IFYQLCVGAPPALREKLNLMSAKEYKYL--------------------RQSSCYSING-- 393
IFY+LC GA +RE+L+L S ++YL R+S Y G
Sbjct: 246 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 305
Query: 394 ----VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEP 446
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++
Sbjct: 306 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 365
Query: 447 VADEGLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKS 501
+ + L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK+
Sbjct: 366 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 425
Query: 502 IYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHF 561
+Y+ LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 426 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 483
Query: 562 NRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKPL-GLLSLLDEESTFPNGTDLTFA 620
N + K EQE Y ++G+ +V + DN+DC++L E L G+L +LDEE+ P +D F
Sbjct: 484 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 543
Query: 621 N----KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 668
+ K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 544 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS 603
Query: 669 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 728
L S C F + S KAG +SV KFK QL L+ +L
Sbjct: 604 ----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKL 657
Query: 729 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 788
ST FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y
Sbjct: 658 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 717
Query: 789 GFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLE 837
+ + +A DP A+ + Y+ G TK+FFR G+ +
Sbjct: 718 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 282/766 (36%), Positives = 421/766 (54%), Gaps = 63/766 (8%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLP---EGKVLKVKSENLVSANPDILDGVDDLMQLS 179
W P +++G I+ I G +S+ P +GK + A D V+D L
Sbjct: 17 WAPHPTDGFQVGNIVDI-GPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 75
Query: 180 YLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVP-LYGNYYIEAYKSKSIES--PH 236
YLNE ++L+N+ RY +D IYT +L+A+NP+ +P +Y + I++Y+ KS+ + PH
Sbjct: 76 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 135
Query: 237 VYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLA-ALGGGSGIEYEILKTN 295
V+AI D A R+M +++QSII+SGESGAGKTE K ++YL + G G I+ I++ N
Sbjct: 136 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 195
Query: 296 PILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYH 355
P+LEAFGNAKT RN+NSSRFGK +EIHF+E + G + +LLEKSR+ + ER YH
Sbjct: 196 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 255
Query: 356 IFYQLCVGAPPALREKLNLMSAKEYKYL--------------------RQSSCYSING-- 393
IFY+LC GA +RE+L+L S ++YL R+S Y G
Sbjct: 256 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 315
Query: 394 ----VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEP 446
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++
Sbjct: 316 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 375
Query: 447 VADEGLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKS 501
+ + L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK+
Sbjct: 376 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 435
Query: 502 IYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHF 561
+Y+ LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 436 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 493
Query: 562 NRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKPL-GLLSLLDEESTFPNGTDLTFA 620
N + K EQE Y ++G+ +V + DN+DC++L E L G+L +LDEE+ P +D F
Sbjct: 494 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 553
Query: 621 N----KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 668
+ K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 554 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS 613
Query: 669 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 728
L S C F + S KAG +SV KFK QL L+ +L
Sbjct: 614 ----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKL 667
Query: 729 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 788
ST FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y
Sbjct: 668 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 727
Query: 789 GFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 834
+ + +A DP A+ + Y+ G TK+FFR G+
Sbjct: 728 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 773
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 282/769 (36%), Positives = 422/769 (54%), Gaps = 63/769 (8%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLP---EGKVLKVKSENLVSANPDILDGVDDLMQLS 179
W P +++G I+ I G +S+ P +GK + A D V+D L
Sbjct: 8 WAPHPTDGFQVGNIVDI-GPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 66
Query: 180 YLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVP-LYGNYYIEAYKSKSIES--PH 236
YLNE ++L+N+ RY +D IYT +L+A+NP+ +P +Y + I++Y+ KS+ + PH
Sbjct: 67 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 126
Query: 237 VYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLA-ALGGGSGIEYEILKTN 295
V+AI D A R+M +++QSII+SGESGAGKTE K ++YL + G G I+ I++ N
Sbjct: 127 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 186
Query: 296 PILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYH 355
P+LEAFGNAKT RN+NSSRFGK +EIHF+E + G + +LLEKSR+ + ER YH
Sbjct: 187 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 246
Query: 356 IFYQLCVGAPPALREKLNLMSAKEYKYL--------------------RQSSCYSING-- 393
IFY+LC GA +RE+L+L S ++YL R+S Y G
Sbjct: 247 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 306
Query: 394 ----VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEP 446
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++
Sbjct: 307 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 366
Query: 447 VADEGLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKS 501
+ + L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK+
Sbjct: 367 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 426
Query: 502 IYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHF 561
+Y+ LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 427 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 484
Query: 562 NRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKPL-GLLSLLDEESTFPNGTDLTFA 620
N + K EQE Y ++G+ +V + DN+DC++L E L G+L +LDEE+ P +D F
Sbjct: 485 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 544
Query: 621 N----KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 668
+ K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 545 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS 604
Query: 669 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 728
L S C F + S KAG +SV KFK QL L+ +L
Sbjct: 605 ----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKL 658
Query: 729 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 788
ST FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y
Sbjct: 659 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 718
Query: 789 GFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLE 837
+ + +A DP A+ + Y+ G TK+FFR G+ +
Sbjct: 719 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 767
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 282/766 (36%), Positives = 420/766 (54%), Gaps = 63/766 (8%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLP---EGKVLKVKSENLVSANPDILDGVDDLMQLS 179
W P +++G I+ I G +S+ P +GK + A D V+D L
Sbjct: 7 WAPHPTDGFQVGNIVDI-GPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 65
Query: 180 YLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVP-LYGNYYIEAYKSKSIES--PH 236
YLNE ++L+N+ RY +D IYT +L+A+NP+ +P +Y + I++Y+ KS+ + PH
Sbjct: 66 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 125
Query: 237 VYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLA-ALGGGSGIEYEILKTN 295
V+AI D A R+M +++QSII+SGESGAGKTE K ++YL + G G I I++ N
Sbjct: 126 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIYDRIVEAN 185
Query: 296 PILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYH 355
P+LEAFGNAKT RN+NSSRFGK +EIHF+E + G + +LLEKSR+ + ER YH
Sbjct: 186 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 245
Query: 356 IFYQLCVGAPPALREKLNLMSAKEYKYL--------------------RQSSCYSING-- 393
IFY+LC GA +RE+L+L S ++YL R+S Y G
Sbjct: 246 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 305
Query: 394 ----VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEP 446
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++
Sbjct: 306 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 365
Query: 447 VADEGLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKS 501
+ + L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK+
Sbjct: 366 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 425
Query: 502 IYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHF 561
+Y+ LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 426 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 483
Query: 562 NRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKPL-GLLSLLDEESTFPNGTDLTFA 620
N + K EQE Y ++G+ +V + DN+DC++L E L G+L +LDEE+ P +D F
Sbjct: 484 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 543
Query: 621 N----KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 668
+ K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 544 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS 603
Query: 669 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 728
L S C F + S KAG +SV KFK QL L+ +L
Sbjct: 604 ----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKL 657
Query: 729 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 788
ST FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y
Sbjct: 658 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 717
Query: 789 GFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 834
+ + +A DP A+ + Y+ G TK+FFR G+
Sbjct: 718 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 763
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 282/766 (36%), Positives = 420/766 (54%), Gaps = 63/766 (8%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLP---EGKVLKVKSENLVSANPDILDGVDDLMQLS 179
W P +++G I+ I G +S+ P +GK + A D V+D L
Sbjct: 5 WAPHPTDGFQVGNIVDI-GPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 63
Query: 180 YLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVP-LYGNYYIEAYKSKSIES--PH 236
YLNE ++L+N+ RY +D IYT +L+A+NP+ +P +Y + I++Y+ KS+ + PH
Sbjct: 64 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 123
Query: 237 VYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLA-ALGGGSGIEYEILKTN 295
V+AI D A R+M +++QSII+SGESGAGKTE K ++YL + G G I I++ N
Sbjct: 124 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIYDRIVEAN 183
Query: 296 PILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYH 355
P+LEAFGNAKT RN+NSSRFGK +EIHF+E + G + +LLEKSR+ + ER YH
Sbjct: 184 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 243
Query: 356 IFYQLCVGAPPALREKLNLMSAKEYKYL--------------------RQSSCYSING-- 393
IFY+LC GA +RE+L+L S ++YL R+S Y G
Sbjct: 244 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 303
Query: 394 ----VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEP 446
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++
Sbjct: 304 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 363
Query: 447 VADEGLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKS 501
+ + L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK+
Sbjct: 364 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 423
Query: 502 IYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHF 561
+Y+ LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 424 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 481
Query: 562 NRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKPL-GLLSLLDEESTFPNGTDLTFA 620
N + K EQE Y ++G+ +V + DN+DC++L E L G+L +LDEE+ P +D F
Sbjct: 482 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 541
Query: 621 N----KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 668
+ K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 542 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS 601
Query: 669 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 728
L S C F + S KAG +SV KFK QL L+ +L
Sbjct: 602 ----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKL 655
Query: 729 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 788
ST FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y
Sbjct: 656 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 715
Query: 789 GFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 834
+ + +A DP A+ + Y+ G TK+FFR G+
Sbjct: 716 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 761
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 276/766 (36%), Positives = 417/766 (54%), Gaps = 63/766 (8%)
Query: 123 WFQLPNGNWELGKILSISGTESVISLP---EGKVLKVKSENLVSANPDILDGVDDLMQLS 179
W P +++G I+ G +S+ P +GK + A D V+D L
Sbjct: 17 WAPHPTDGFQVGNIVR-RGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 75
Query: 180 YLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVP-LYGNYYIEAYKSKSIES--PH 236
YLNE ++L+N+ RY +D IYT +L+A+NP+ +P +Y + I++Y+ KS+ + PH
Sbjct: 76 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 135
Query: 237 VYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLA-ALGGGSGIEYEILKTN 295
V+AI D A R+M +++QSII+SGESGAGKTE K ++YL + G G I+ I++ N
Sbjct: 136 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 195
Query: 296 PILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCAEGERAYH 355
P+LEAFGNAKT RN+NSSRFGK +EIHF+E + G + +LLEKSR+ + ER YH
Sbjct: 196 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 255
Query: 356 IFYQLCVGAPPALREKLNLMSAKEYKYL--------------------RQSSCYSING-- 393
IFY+LC GA +RE+L+L S ++YL R+S Y G
Sbjct: 256 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 315
Query: 394 ----VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEP 446
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++
Sbjct: 316 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 375
Query: 447 VADEGLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKS 501
+ + L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK+
Sbjct: 376 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 435
Query: 502 IYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHF 561
+Y+ LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 436 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 493
Query: 562 NRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKPL-GLLSLLDEESTFPNGTDLTFA 620
N + K EQE Y ++G+ +V + DN+DC++L E L G+L +LDEE+ P +D F
Sbjct: 494 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 553
Query: 621 NKLKQHLNSNPCFRGER------------DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 668
+ + Q + R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 554 SAVHQKHKDHFRLSIPRKSKLAIHENIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS 613
Query: 669 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 728
L S C F + S KAG +SV KFK QL L+ +L
Sbjct: 614 ----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKL 667
Query: 729 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 788
ST FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y
Sbjct: 668 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 727
Query: 789 GFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 834
+ + +A DP A+ + Y+ G TK+FFR G+
Sbjct: 728 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 773
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/689 (38%), Positives = 393/689 (57%), Gaps = 45/689 (6%)
Query: 170 DGVDDLMQLSYLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAY-- 227
+GV D + L+ + E + + NL R+K D IYT G V+++ NPFK + +Y I+AY
Sbjct: 8 EGVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYKESDIKAYNG 67
Query: 228 KSKSIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALG----- 282
+ K PH+YA+ + A R M + + NQ +IISGESGAGKTE +K MQ+L +
Sbjct: 68 RYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSP 127
Query: 283 GGSGIEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKS 342
G I +L +NP+LEAFGNAKT RNDNSSRFGK +E+ F+ G G I +LLEKS
Sbjct: 128 NGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKS 187
Query: 343 RVVQCAEGERAYHIFYQLCVGAPPALREKLNLM-SAKEYKYLRQSSCYSINGVDDAEQFR 401
RVV +GER++HIFYQ+ G + ++L L +A Y+YL++S C+ ++ +DD+ +F+
Sbjct: 188 RVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFK 247
Query: 402 IVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNE----NHVEPVADEGLITVAK 457
I+V+A++ + + + DQ S++ +LAA+L +GN++F + V+ + L A
Sbjct: 248 IIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAAS 307
Query: 458 LIGCDIGELKLALSTRKMRVG----NDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQ 513
+ D L +AL R + G + I + +QA +RDALAK++Y LF WLV +
Sbjct: 308 CLKTDQQSLSIALCYRSISTGVGKRCEVISVPMDCNQAAYSRDALAKALYERLFNWLVSK 367
Query: 514 INKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEY 573
IN + + G I ILDIYGFE F NSFEQ IN+ NE+LQQ F K EQEEY
Sbjct: 368 INTIINCTTEK-GPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEY 426
Query: 574 IQDGIDWAKVDFEDNKDCLNLFE-KPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPC 632
+++GI+W +++ +NK L E KP+GL+SLLDE TD TF + + + NP
Sbjct: 427 VREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPH 486
Query: 633 F--------RGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIF 684
R D F + HYAG+V YD GFL+KN+D L D I
Sbjct: 487 LQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLI-------------- 532
Query: 685 ASNMLSQSNKPVVGPLYKAGGADSQKL--SVATKFKGQLFQLMQRLESTTPHFIRCIKPN 742
S+M S S+ V G DS+K + ++F+ + L+ L + +PH++RCIK N
Sbjct: 533 -SSMQSSSDPLVQGLFPPTRPEDSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSN 591
Query: 743 NFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPL 802
+ + G+ ++ V Q+R G+LE VR+ R+GF R+ + +F RY L ++ S +
Sbjct: 592 DNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGT 651
Query: 803 S--VSVAILHQFNILPEMYQVGYTKLFFR 829
+ + IL Q NI E ++G TK+F R
Sbjct: 652 AKQATELILQQHNIDKEEIRMGKTKVFIR 680
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/689 (38%), Positives = 392/689 (56%), Gaps = 45/689 (6%)
Query: 170 DGVDDLMQLSYLNEPSVLYNLHYRYKQDMIYTKAGPVLVAINPFKKVPLYGNYYIEAY-- 227
+GV D + L+ + E + + NL R+K D IYT G V+++ NPFK + +Y I+AY
Sbjct: 8 EGVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYKESDIKAYNG 67
Query: 228 KSKSIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALG----- 282
+ K PH+YA+ + A R M + + NQ +IISGESGAGKTE +K MQ+L +
Sbjct: 68 RYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSP 127
Query: 283 GGSGIEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKS 342
G I +L +NP+LEAFGNAKT RNDNSSRFGK +E+ F+ G G I +LLEKS
Sbjct: 128 NGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKS 187
Query: 343 RVVQCAEGERAYHIFYQLCVGAPPALREKLNLM-SAKEYKYLRQSSCYSINGVDDAEQFR 401
RVV +GER++HIFYQ+ G + ++L L +A Y+YL++S C+ ++ +DD+ +F+
Sbjct: 188 RVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFK 247
Query: 402 IVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNE----NHVEPVADEGLITVAK 457
I+V+A++ + + + DQ S++ +LAA+L +GN++F + V+ + L A
Sbjct: 248 IIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAAS 307
Query: 458 LIGCDIGELKLALSTRKMRVG----NDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQ 513
+ D L +AL R + G I + +QA +RDALAK++Y LF WLV +
Sbjct: 308 CLKTDQQSLSIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSK 367
Query: 514 INKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEY 573
IN + + G I ILDIYGFE F NSFEQ IN+ NE+LQQ F K EQEEY
Sbjct: 368 INTIINCTTEK-GPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEY 426
Query: 574 IQDGIDWAKVDFEDNKDCLNLFE-KPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPC 632
+++GI+W +++ +NK L E KP+GL+SLLDE TD TF + + + NP
Sbjct: 427 VREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPH 486
Query: 633 F--------RGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIF 684
R D F + HYAG+V YD GFL+KN+D L D I
Sbjct: 487 LQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLI-------------- 532
Query: 685 ASNMLSQSNKPVVGPLYKAGGADSQKL--SVATKFKGQLFQLMQRLESTTPHFIRCIKPN 742
S+M S S+ V G DS+K + ++F+ + L+ L + +PH++RCIK N
Sbjct: 533 -SSMQSSSDPLVQGLFPPTRPEDSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSN 591
Query: 743 NFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPL 802
+ + G+ ++ V Q+R G+LE VR+ R+GF R+ + +F RY L ++ S +
Sbjct: 592 DNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGT 651
Query: 803 S--VSVAILHQFNILPEMYQVGYTKLFFR 829
+ + IL Q NI E ++G TK+F R
Sbjct: 652 AKQATELILQQHNIDKEEIRMGKTKVFIR 680
>pdb|2XTL|A Chain A, Structure Of The Major Pilus Backbone Protein From
Streptococcus Agalactiae
pdb|2XTL|B Chain B, Structure Of The Major Pilus Backbone Protein From
Streptococcus Agalactiae
Length = 452
Score = 33.5 bits (75), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 265 AGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFS 324
A KT+ +I + Y A L G + +E +L+TN + +GN T N+ +I +
Sbjct: 108 AAKTKDVEIKITYSATLNGSAVVE--VLETNDVKLDYGNNPTIENEPKEGIPVDKKITVN 165
Query: 325 ETGKISG--ANIQTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALREKLNLMSAKEYKY 382
+T + G N ++ +Q +G++ ++ A NL +AK Y+
Sbjct: 166 KTWAVDGNEVNKADETVDAVFTLQVKDGDKWVNVDSAKATAATSFKHTFENLDNAKTYRV 225
Query: 383 LRQSSCYS------INGV 394
+ + S Y+ +NGV
Sbjct: 226 IERVSGYAPEYVSFVNGV 243
>pdb|2Q8Q|A Chain A, Crystal Structure Of S. Aureus Isde Complexed With Heme
Length = 260
Score = 33.1 bits (74), Expect = 0.96, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 26/37 (70%)
Query: 133 LGKILSISGTESVISLPEGKVLKVKSENLVSANPDIL 169
+G ++ I+G E+VI + + + + +ENL++ NPDI+
Sbjct: 159 IGDLVKIAGGENVIKVKDRQYISSNTENLLNINPDII 195
>pdb|2Q8P|A Chain A, Crystal Structure Of Selenomethionine Labelled S. Aureus
Isde Complexed With Heme
Length = 260
Score = 33.1 bits (74), Expect = 1.0, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 26/37 (70%)
Query: 133 LGKILSISGTESVISLPEGKVLKVKSENLVSANPDIL 169
+G ++ I+G E+VI + + + + +ENL++ NPDI+
Sbjct: 159 IGDLVKIAGGENVIKVKDRQYISSNTENLLNINPDII 195
>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1
pdb|3ODT|B Chain B, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1
Length = 313
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 856 GHQARLCLKELRRGIVALQSFIRGEKIRKEYALV--LQRHRAAV 897
GHQ +C + G+V S+ + K+ KE +LV LQ H A+V
Sbjct: 102 GHQGNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAHNASV 145
>pdb|1X6V|B Chain B, The Crystal Structure Of Human 3'-Phosphoadenosine-5'-
Phosphosulfate Synthetase 1
pdb|1X6V|A Chain A, The Crystal Structure Of Human 3'-Phosphoadenosine-5'-
Phosphosulfate Synthetase 1
pdb|1XJQ|B Chain B, Adp Complex Of Human Paps Synthetase 1
pdb|1XJQ|A Chain A, Adp Complex Of Human Paps Synthetase 1
pdb|1XNJ|B Chain B, Aps Complex Of Human Paps Synthetase 1
pdb|1XNJ|A Chain A, Aps Complex Of Human Paps Synthetase 1
Length = 630
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 256 SIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEA----FGNAKTSRNDN 311
++ ++G SGAGKT + +YL GI L + I + G + R +N
Sbjct: 54 TVWLTGLSGAGKTTVSMALEEYLVC----HGIPCYTLDGDNIRQGLNKNLGFSPEDREEN 109
Query: 312 SSRFGKLIEIHFSETGKISGAN-IQTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALRE 370
R ++ ++ F++ G + + I + +++ Q EG A F+++ V AP + E
Sbjct: 110 VRRIAEVAKL-FADAGLVCITSFISPYTQDRNNARQIHEG--ASLPFFEVFVDAPLHVCE 166
Query: 371 KLNLMSAKEYKYLRQSSCYSINGVD 395
+ ++ YK R G+D
Sbjct: 167 QRDVKGL--YKKARAGEIKGFTGID 189
>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 58
Score = 31.6 bits (70), Expect = 3.0, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 865 ELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIKSRVAR 909
+LR + +Q IRG +RK Y L RAA+ +QR ++ AR
Sbjct: 3 KLRAACIRIQKTIRGWLLRKRY---LCMQRAAITVQRYVRGYQAR 44
>pdb|2OFW|A Chain A, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|B Chain B, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|C Chain C, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|D Chain D, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|E Chain E, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|F Chain F, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|G Chain G, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
pdb|2OFW|H Chain H, Crystal Structure Of The Apsk Domain Of Human Papss1
Complexed With 2 Aps Molecules
Length = 208
Score = 30.4 bits (67), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 256 SIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEA----FGNAKTSRNDN 311
+I ++G SGAGKT + +YL GI L + I + G + R +N
Sbjct: 35 TIWLTGLSGAGKTTVSMALEEYLVC----HGIPCYTLDGDNIRQGLNKNLGFSPEDREEN 90
Query: 312 SSRFGKLIEIHFSETGKISGAN-IQTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALRE 370
R ++ ++ F++ G + + I + +++ Q EG A F+++ V AP + E
Sbjct: 91 VRRIAEVAKL-FADAGLVCITSFISPYTQDRNNARQIHEG--ASLPFFEVFVDAPLHVCE 147
Query: 371 KLNLMSAKEYKYLRQSSCYSINGVD 395
+ ++ YK R G+D
Sbjct: 148 QRDVKGL--YKKARAGEIKGFTGID 170
>pdb|2PEY|A Chain A, Crystal Strucutre Of Deletion Mutant Of Aps-Kinase Domain
Of Human Paps-Synthetase 1
pdb|2PEY|B Chain B, Crystal Strucutre Of Deletion Mutant Of Aps-Kinase Domain
Of Human Paps-Synthetase 1
pdb|2PEZ|A Chain A, Crystal Structrue Of Deletion Mutant Of Aps-Kinase Domain
Of Human Paps-Synthetase 1 In Complex With Cyclic Paps
And Dadp
pdb|2PEZ|B Chain B, Crystal Structrue Of Deletion Mutant Of Aps-Kinase Domain
Of Human Paps-Synthetase 1 In Complex With Cyclic Paps
And Dadp
Length = 179
Score = 30.0 bits (66), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 256 SIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEA----FGNAKTSRNDN 311
++ ++G SGAGKT + +YL GI L + I + G + R +N
Sbjct: 7 TVWLTGLSGAGKTTVSMALEEYLVC----HGIPCYTLDGDNIRQGLNKNLGFSPEDREEN 62
Query: 312 SSRFGKLIEIHFSETGKISGAN-IQTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALRE 370
R ++ ++ F++ G + + I + +++ Q EG A F+++ V AP + E
Sbjct: 63 VRRIAEVAKL-FADAGLVCITSFISPYTQDRNNARQIHEG--ASLPFFEVFVDAPLHVCE 119
Query: 371 KLNLMSAKEYKYLRQSSCYSINGVD 395
+ ++ YK R G+D
Sbjct: 120 QRDVKGL--YKKARAGEIKGFTGID 142
>pdb|2OFX|A Chain A, Crystal Structure Of The Apsk Domain Of Human Papss1 In
Complex With Adpmg And Paps
pdb|2OFX|B Chain B, Crystal Structure Of The Apsk Domain Of Human Papss1 In
Complex With Adpmg And Paps
Length = 207
Score = 29.6 bits (65), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 256 SIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEA----FGNAKTSRNDN 311
++ ++G SGAGKT + +YL GI L + I + G + R +N
Sbjct: 34 TVWLTGLSGAGKTTVSMALEEYLVC----HGIPCYTLDGDNIRQGLNKNLGFSPEDREEN 89
Query: 312 SSRFGKLIEIHFSETGKISGAN-IQTFLLEKSRVVQCAEGERAYHIFYQLCVGAPPALRE 370
R ++ ++ F++ G + + I + +++ Q EG A F+++ V AP + E
Sbjct: 90 VRRIAEVAKL-FADAGLVCITSFISPYTQDRNNARQIHEG--ASLPFFEVFVDAPLHVCE 146
Query: 371 KLNLMSAKEYKYLRQSSCYSINGVD 395
+ ++ YK R G+D
Sbjct: 147 QRDVKGL--YKKARAGEIKGFTGID 169
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,690,941
Number of Sequences: 62578
Number of extensions: 1269541
Number of successful extensions: 3863
Number of sequences better than 100.0: 77
Number of HSP's better than 100.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3292
Number of HSP's gapped (non-prelim): 99
length of query: 1166
length of database: 14,973,337
effective HSP length: 110
effective length of query: 1056
effective length of database: 8,089,757
effective search space: 8542783392
effective search space used: 8542783392
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)