Your job contains 1 sequence.
>001070
MSSQSQSQSPNQNQKQFDMRNWFPPYPPPSSSAAGDNFFPYPPPPPPPPPEPHANMHPHP
YPHGPHRLLPYTPLPTTTVVSPNAGPQILALLNNNKSKHVGSTAPIYGKRVFGDYVAYDV
DAVEEGREPTQQLEVNPITKYGSDPELLIGRQIAVNKHYVCYGLKGGNVRVLNLNTATRS
LLRGHTKIKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLW
ASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAI
YSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDPPSEHIIKLYCVQTQAIQQYSLNL
FQCLPPPAESGGLERPDSSVSNDANGSRLSEFLFPSSTSKPSFSETTGAVRYPQLSTSHE
ATTSQENLTSKTESQPLSLARTTSDTNVVCVASPPLPLSPSFSRKHSGSINPPNSSELGS
LLNEPGGSQPIIDSSFDGKTDTTQVLSHVPSLDSDANNDKINIAPNDISRALNPSMFKHP
THLITPSEILMSASSSETTNIIGGKNEEEVVVNSDAGNAEVEVKVLDETRFTHDEFGSRG
ESQNLVSENREKYLRYQATDPRIGMAAKCAGTSAETCVAEEAQEVDGAGIMETLAQPPCN
DEAEVEDSTQDLDGGVSDSTMTTTFAQTGASSAKGKKQKEKKYQASSQCSPSSTVLNLAN
LSNEPAGSSSLPSAPAAFSQVIAMQDMLNQLMTMQKELQKQMSNLVTLPVTKEGRRLEAS
LGRGIEKAVKASTDALWARFHEENARNEKLLRDRTQQITGLITNLINKDLTASLEKLVKK
ELAAVGPAIVRTISPSIEKTITSAIVESFQRGVGDKAVNQLERSVNSRLEATVGRQIQAQ
FQTSGKHALQDALKSSVEASVIPAFEKSCKAMFEQVDATFQKGMVEHTTATLQHFESTHS
PLALVLRESVNSVSSMAQTLSGEFVDGQRKLFDLAGVRNNTSAFNPSVPLSNGPLLGLHE
KVEATMDPTKELSRLVSDRKYEEAFTTALQRSDVSIVSWLCSQVDMHGLLSMVPLPLSQG
VLLSLLQQLACDINKDTARKLAWLTDVAAAINPADPMIAVHARPIFEQVYQRLHHQRSSP
TISGAELSSIRLLIHVINSMLMTFK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001070
(1165 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088165 - symbol:VCS "AT3G13300" species:3702 ... 1345 3.5e-268 4
UNIPROTKB|E1BJH1 - symbol:EDC4 "Uncharacterized protein" ... 151 7.6e-19 4
RGD|1562009 - symbol:Edc4 "enhancer of mRNA decapping 4" ... 148 2.5e-18 4
MGI|MGI:2446249 - symbol:Edc4 "enhancer of mRNA decapping... 150 6.3e-18 4
DICTYBASE|DDB_G0288241 - symbol:DDB_G0288241 "Enhancer of... 174 7.7e-18 4
UNIPROTKB|F1NKX2 - symbol:EDC4 "Uncharacterized protein" ... 150 1.4e-17 5
UNIPROTKB|E2RKN5 - symbol:EDC4 "Uncharacterized protein" ... 150 6.6e-16 5
ZFIN|ZDB-GENE-030131-5032 - symbol:edc4 "enhancer of mRNA... 124 3.2e-14 4
UNIPROTKB|Q6P2E9 - symbol:EDC4 "Enhancer of mRNA-decappin... 152 4.2e-13 3
CGD|CAL0003874 - symbol:PGA55 species:5476 "Candida albic... 147 6.0e-06 1
UNIPROTKB|Q59SG9 - symbol:PGA55 "Flocculin-like protein" ... 147 6.0e-06 1
FB|FBgn0032340 - symbol:Ge-1 species:7227 "Drosophila mel... 111 0.00022 3
>TAIR|locus:2088165 [details] [associations]
symbol:VCS "AT3G13300" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010071 "root meristem
specification" evidence=IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=IMP] [GO:0071365 "cellular
response to auxin stimulus" evidence=IMP] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031087 "deadenylation-independent decapping of
nuclear-transcribed mRNA" evidence=IDA] [GO:0006402 "mRNA catabolic
process" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002686 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397 GO:GO:0010072
GO:GO:0009965 GO:GO:0071365 GO:GO:0000932 PROSITE:PS50954
EMBL:AB024034 GO:GO:0010071 GO:GO:0031087 eggNOG:NOG270061
KO:K12616 EMBL:AY128341 EMBL:AK230280 EMBL:AK221240 IPI:IPI00527488
IPI:IPI00531059 RefSeq:NP_187938.2 RefSeq:NP_850576.1
UniGene:At.8098 ProteinModelPortal:Q9LTT8 SMR:Q9LTT8 STRING:Q9LTT8
PRIDE:Q9LTT8 ProMEX:Q9LTT8 EnsemblPlants:AT3G13300.1 GeneID:820530
KEGG:ath:AT3G13300 GeneFarm:2985 TAIR:At3g13300
HOGENOM:HOG000029311 InParanoid:Q9LTT8 OMA:DTFQSIV PhylomeDB:Q9LTT8
ProtClustDB:CLSN2684765 Genevestigator:Q9LTT8 Uniprot:Q9LTT8
Length = 1344
Score = 1345 (478.5 bits), Expect = 3.5e-268, Sum P(4) = 3.5e-268
Identities = 274/457 (59%), Positives = 337/457 (73%)
Query: 710 SPSSTVLNLANLSNEXXXXXXXXXXXXXFSQVIAMQDMLNQLMTMQKELQKQMSNLVTLP 769
S SS V NLA+ NE Q++AMQ+ +NQ+M QKE+Q+Q+SN T P
Sbjct: 892 STSSNVANLADSFNEQSQSLSHPMTDL-LPQLLAMQETMNQVMASQKEMQRQLSNAATGP 950
Query: 770 VTKEGRRLEASLGRGIEKAVKASTDALWARFHEENARNEKLLRDRTQQITGLITNLINKD 829
+ KE +RLE +LGR IEK+ K++ DALWAR EE +NEK LRD QQI TN ++K+
Sbjct: 951 IGKESKRLEVALGRMIEKSSKSNADALWARIQEETVKNEKALRDHAQQIVNATTNFMSKE 1010
Query: 830 LTASLEKLVKKELAAVGPAIVRTISPSIEKTITSAIVESFQRGVGDKAVNQLERSVNSRL 889
L A EK +KKELAA+GPA+ R++ P IEKT++SAI ESFQRG+GDKAVNQL++SVN +L
Sbjct: 1011 LNAMFEKTIKKELAAIGPALARSVVPVIEKTVSSAITESFQRGIGDKAVNQLDKSVNIKL 1070
Query: 890 EATVGRQIQAQFQTSGKHALQDALKSSVEASVIPAFEKSCKAMFEQVDATFQKGMVEHTT 949
EATV RQIQAQFQTSGK ALQ+ L+SSVE+SVIP+FEK+CKAMF+Q+D+ FQKG+ EHT
Sbjct: 1071 EATVARQIQAQFQTSGKQALQEGLRSSVESSVIPSFEKACKAMFDQIDSAFQKGIAEHTN 1130
Query: 950 ATLQHFESTHSPLALVLRESVNSVSSMAQTLSGEFVDGQRKLFDLAGVRNNTSAFNPSVP 1009
A Q F+S HS LA L+ES+ S SS+AQ LS E + QR L LA N+ N V
Sbjct: 1131 AAQQRFDSGHSQLAHTLKESITSASSVAQALSRELAETQRNLLALAAAGANSGGSNSLVT 1190
Query: 1010 -LSNGPLLGLHEKVEATMDPTKELSRLVSDRKYEEAFTTALQRSDVSIVSWLCSQVDMHG 1068
LS GPL L EKVEA MDPT ELSRL+S+RKYEE+FT+ALQRSDVSIVSWLCSQVD+ G
Sbjct: 1191 QLSGGPLGALLEKVEAPMDPTTELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRG 1250
Query: 1069 LLSMXXXXXXXXXXXXXXXXXACDINKDTARKLAWLTDVAAAINPADPMIAVHARPIFEQ 1128
LL+M ACDI+KDT+RKLAW+TDV AAINP+D MIAVHARPIFEQ
Sbjct: 1251 LLAMNPLPLSQGVLLSLLQQLACDISKDTSRKLAWMTDVVAAINPSDQMIAVHARPIFEQ 1310
Query: 1129 VYQRLHHQRSSPTISGAELSSIRLLIHVINSMLMTFK 1165
VYQ LHH R++P G+++S+IRL++HVINSMLM K
Sbjct: 1311 VYQILHHHRNAP---GSDVSAIRLIMHVINSMLMGCK 1344
Score = 957 (341.9 bits), Expect = 3.5e-268, Sum P(4) = 3.5e-268
Identities = 218/476 (45%), Positives = 286/476 (60%)
Query: 188 IKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEG 247
IKIW+D K PL++L+PH G PV+SA ++T+P + HIIL+T GPLNRE+K+W SA EEG
Sbjct: 381 IKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMKIWVSAGEEG 440
Query: 248 WSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307
W LP AESW+CTQTLDLKSS +PR EEAFFNQV+ LS+AGLLL ANAK+NA+Y+VHL Y
Sbjct: 441 WLLPADAESWRCTQTLDLKSSTEPRAEEAFFNQVIALSEAGLLLLANAKRNALYAVHLDY 500
Query: 308 GNNSAATRIDYIAEFTVTMPVLSFTGTIDPPSEHIIKLYCVQTQAIQQYSLNLFQCLPPP 367
G++ TR+DY++EFTVTMP+LSF GT DPP E I+K+YCVQT AIQQY+L+L CLPPP
Sbjct: 501 GSSPVGTRMDYLSEFTVTMPILSFIGTNDPPEEPIVKVYCVQTLAIQQYTLDLCLCLPPP 560
Query: 368 AESGGLERPDSSVSNDAN---G----SRLSEFLFPS--STSKPSF----SETTGAVRYPQ 414
E+ GLE+ DSSVS +AN G S L PS S KPS SE+ + +P
Sbjct: 561 IENMGLEKSDSSVSREANLVEGMSEPSGLKPTDLPSVDSVPKPSIIVNRSESANKLSFP- 619
Query: 415 LSTSHEATTSQENLTSKTESQPLSLARTTSDTNVVCVAXXXXXXXXXXXRKHSGSINPPN 474
S EAT SQ + E + L TS K SG P
Sbjct: 620 ---SAEAT-SQAIVPPNGEPKTSGLPSQTSGAGSAYATLPQLPLSPRLSSKLSGYHTPVE 675
Query: 475 SSELGSLLNEPGGSQPIIDSSFDGKTDTTQVLS-HVPSLDSDANNDKINIAPND-ISRAL 532
+ E +E GG P D S D + D + V S++ + + N+ P+D +S
Sbjct: 676 AIEPVIPHHELGGKTPSADYSVDRQMDAVGERNLDVSSVEEISRSKDSNVTPDDDVSGMR 735
Query: 533 NPS-MFKHPTHLITPSEILMSASSSETTNIIGGKNEEEVV---VNSDAGNAEVEVKVLDE 588
+PS FKHPTHL+TPSEILM SS+E + + + + VN+D + EVEVK + E
Sbjct: 736 SPSAFFKHPTHLVTPSEILMGVSSAEASITTEDRRDRDANIQDVNNDPRDTEVEVKEISE 795
Query: 589 TRFTHD-EFGSRGESQNLVSENREKYLRYQATDPRIGMAAKCAGTSAETCVAEEAQ 643
R T + E E++N SENREK Q ++ MA C ++ T + E++
Sbjct: 796 ARSTQNGEINDHDETENCTSENREKVFCSQVSNLSTEMARDCYPSTEGTFIPGESK 851
Score = 286 (105.7 bits), Expect = 3.5e-268, Sum P(4) = 3.5e-268
Identities = 53/80 (66%), Positives = 66/80 (82%)
Query: 108 GKRVFGDYVAYDVDAVEEGREPTQQLEVNPITKYGSDPELLIGRQIAVNKHYVCYGLKGG 167
G+R+ G++ YDVD +G E QLEV PITKYGSDP+L++GRQIAVNK Y+CYGLKGG
Sbjct: 160 GRRLIGEHAVYDVDVRLQG-EIQPQLEVTPITKYGSDPQLVVGRQIAVNKVYICYGLKGG 218
Query: 168 NVRVLNLNTATRSLLRGHTK 187
N+RVLN+NTA RSL RGH++
Sbjct: 219 NIRVLNINTALRSLFRGHSQ 238
Score = 46 (21.3 bits), Expect = 3.5e-268, Sum P(4) = 3.5e-268
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 83 NAGPQILALLNN-NKSKHVGSTAP 105
N G ILALLNN N V + P
Sbjct: 104 NPGTHILALLNNTNNGAPVANQEP 127
Score = 38 (18.4 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 265 LKSSAKPRVEEA---FFNQVVVLSQAGLLLFANAKKNAIYSVH 304
++SS P E+A F+Q+ Q G+ NA + S H
Sbjct: 1098 VESSVIPSFEKACKAMFDQIDSAFQKGIAEHTNAAQQRFDSGH 1140
>UNIPROTKB|E1BJH1 [details] [associations]
symbol:EDC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0000932 GeneTree:ENSGT00510000047791
OMA:ESPRNGL EMBL:DAAA02046689 IPI:IPI00706403
Ensembl:ENSBTAT00000008416 Uniprot:E1BJH1
Length = 1404
Score = 151 (58.2 bits), Expect = 7.6e-19, Sum P(4) = 7.6e-19
Identities = 64/251 (25%), Positives = 113/251 (45%)
Query: 745 QDMLNQLMTMQKEL-QKQMSNLVTLPVTKEGRRLEASLGRGIEKAVKASTDALWARFHEE 803
Q L QL Q+EL Q+ + L L T G +E +L E+ ++ L E
Sbjct: 957 QRELAQLRHSQEELLQRLCAQLEGLQSTVTGH-VERALESRHEQERNSTERRLERALAEG 1015
Query: 804 NARNEKLLRDRTQQITGLITNLINKDLTASLEKLVKKELAAVGPAIVRTISPSIEKTITS 863
R +L TQQ++ +++ + L S+ +KK V P + R++ P + +++
Sbjct: 1016 QQRGGQLQEQLTQQLSQALSSAVAGRLERSVRDEIKK---TVPPCVSRSLEP-VAGQLSN 1071
Query: 864 AIVESFQRGVGDKAVNQLERSVNSR-LEATVGRQIQAQFQTSGKHALQDALKSSVEASVI 922
++ V + + + S+ L + R Q G +Q A + + ++ V+
Sbjct: 1072 SVATKLT-AVESSMKENISKLLKSKNLTDAIARAAADTLQ--GP--MQAAYREAFQSVVL 1126
Query: 923 PAFEKSCKAMFEQVDATFQKGMVEHTTATLQHFES-------THSPLALVLRESVNSVSS 975
PAFEKSC+AMF+Q++ +F+ G E+ H +S P+ LR V ++
Sbjct: 1127 PAFEKSCQAMFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVGTLQG 1186
Query: 976 ----MAQTLSG 982
MA T+SG
Sbjct: 1187 ATEQMAATVSG 1197
Score = 116 (45.9 bits), Expect = 3.6e-15, Sum P(4) = 3.6e-15
Identities = 80/396 (20%), Positives = 161/396 (40%)
Query: 772 KEGRRLEASLGRGIEKAVKASTDALWAR-FHEENARNEKLLRDRT-QQITGLITNLINKD 829
+ G +L+ L + + +A+ ++ R +E + R+ + + G ++N +
Sbjct: 1017 QRGGQLQEQLTQQLSQALSSAVAGRLERSVRDEIKKTVPPCVSRSLEPVAGQLSNSVATK 1076
Query: 830 LTA---SLEKLVKKELAA--VGPAIVRTISPSIEKTITSAIVESFQRGVGDKAVNQLERS 884
LTA S+++ + K L + + AI R + +++ + +A E+FQ V + E+S
Sbjct: 1077 LTAVESSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVV----LPAFEKS 1132
Query: 885 VNSRLEATVGRQIQAQFQTSGKHALQDALKSSVEASVIPAFE--KSCKAMFEQVDATFQK 942
+ + QI F+ + LQ L+S +++ E + A + T Q
Sbjct: 1133 CQAMFQ-----QINDSFRLGTQEYLQQ-LESHMKSRKAREQEAREPVLAQLRGLVGTLQ- 1185
Query: 943 GMVEHTTATLQHFESTHSPLALVLRESVNSVSSMAQTLSGEFVDGQRKLFDLAGVRNNTS 1002
G E AT+ S + + L +V S+ V G+ + TS
Sbjct: 1186 GATEQMAATVSG--SVRAEVQHQLHVAVGSLQEAILAQVQRIVKGEVSVALKEQQAAVTS 1243
Query: 1003 AFNPSVPLSNG-PLLGLHEKVEATMDPTKELSRLVSDRKYEEAFTTALQRSDVSIVSWLC 1061
+ ++ + G P+ H +A + +L+ +AF AL +D+++V ++C
Sbjct: 1244 SIMQAMRSAAGTPVPAAHLDCQAQQ---AHILQLLQQGHLNQAFQQALTAADLNLVLYVC 1300
Query: 1062 SQVDMHGLLSMXXXXXXXXXXXXXXXXXACDINKDTARKLAWLTDVAAAINPADPMIAVH 1121
VD + A D+ T KL++L + ++ +DP+ H
Sbjct: 1301 ETVDPGQVFGQPPCPLSQPVLLSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDH 1360
Query: 1122 ARPIFEQVYQRLHH-QRSSPTIS-GAELSSIRLLIH 1155
+ QV Q+L ++ P S G + L++H
Sbjct: 1361 MGSVMAQVRQKLFQFLQAEPHNSLGKAARRLSLMLH 1396
Score = 112 (44.5 bits), Expect = 7.6e-19, Sum P(4) = 7.6e-19
Identities = 28/105 (26%), Positives = 56/105 (53%)
Query: 87 QILALLNNNKSKHVGSTAPIYGKRVFGDYVAYDVDAVEEGREPTQQLEVNPITKYGSDPE 146
Q++ LL ++ S +G I K V + VA ++ + ++++ P+ KY + +
Sbjct: 79 QVICLLGDDSSTGIG----ILAKEV--EIVASSDSSISSKARGSNKVKIQPVAKYDWEQK 132
Query: 147 LLIGRQIAVNKHYVCYGLKGGN-----VRVLNLNTATRSLLRGHT 186
G IAV+ ++ Y ++ N VRV++++T+ R+LL+G T
Sbjct: 133 YYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFT 177
Score = 96 (38.9 bits), Expect = 7.6e-19, Sum P(4) = 7.6e-19
Identities = 33/134 (24%), Positives = 54/134 (40%)
Query: 203 KPHGGQPVNSAQYL-TAPNQAGHI----ILVTAGPLNREVKLWASASEEGWSLPTHAESW 257
KPH G+P++ + Q + L+T NRE+K+W + S W
Sbjct: 342 KPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVS------------W 389
Query: 258 KCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRID 317
C QT+ V +V + A L+ ++ ++ +Y + L
Sbjct: 390 TCLQTIRFSPDIFSPVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQEEGRACFS 449
Query: 318 YIAEFTVTMPVLSF 331
I+EF +T PVLSF
Sbjct: 450 SISEFLLTHPVLSF 463
Score = 63 (27.2 bits), Expect = 7.6e-19, Sum P(4) = 7.6e-19
Identities = 35/150 (23%), Positives = 56/150 (37%)
Query: 333 GTIDPPSEHIIKLYCVQTQAIQQYSLNLFQCLPPPAESGGLERPDSSVSNDANGSRLSEF 392
G ++ + +IKL+CV T+A+Q + L P + P S D
Sbjct: 497 GAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVA---PLPSHSTHED--------- 544
Query: 393 LFPSSTSKPSF-SETTGAVRY---PQLSTSHEATTSQENLTSKTESQPLSLARTTSDTNV 448
FP S+P SE G+ + P L E + L+ +E++P + T D +
Sbjct: 545 -FPFGESRPELGSEGLGSATHGSQPDLRRIVELPAPADFLSLSSETKPKLM---TPDAFM 600
Query: 449 VCVAXXXXXXXXXXXRKHSGSINPPNSSEL 478
A S S + +SS L
Sbjct: 601 TPSASLQQIAASPSSSSSSSSSSSSSSSSL 630
Score = 47 (21.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 366 PPAESGGLERPDSSVSNDANGSRLSEFLFP---SSTSKPSF 403
P AE+ +RP ++ + D NG + + L +ST+KP F
Sbjct: 30 PSAEN---QRPSNAYNGDLNGLLVPDPLCSGDSASTNKPGF 67
Score = 44 (20.5 bits), Expect = 5.2e-08, Sum P(4) = 5.2e-08
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 847 PAIVRTISPSIEKTITSAIVESFQRGVGDKAVNQLE 882
P ++ + S ++ + I E+ RG G A LE
Sbjct: 729 PDVISSASTALSQDIPEIASEALSRGFGASAPEGLE 764
Score = 40 (19.1 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 834 LEKLVKKELAAVGPAIVRTISPSIEKTITSAIVESFQRGVGDK 876
LE + +E A + T +P I + S++ ES + G+ +K
Sbjct: 810 LEAALTQEATAPDSQVWPT-APDITRETCSSLAESPRNGLQEK 851
Score = 38 (18.4 bits), Expect = 2.5e-16, Sum P(4) = 2.5e-16
Identities = 15/66 (22%), Positives = 29/66 (43%)
Query: 373 LERPDSSVSNDANGSRLSEFLFPSSTSKPSFSETTGAVRYPQLSTSHEATTSQENLTSKT 432
L PD+ ++ A+ +++ PSS+S S S ++ + +S + +L
Sbjct: 593 LMTPDAFMTPSASLQQIAAS--PSSSSSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPP 650
Query: 433 ESQPLS 438
E LS
Sbjct: 651 EELTLS 656
Score = 38 (18.4 bits), Expect = 5.1e-13, Sum P(4) = 5.1e-13
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 223 GHIILVTAGPLNREVKLWASASEEGW 248
GH ++ G L+ + + A+AS +G+
Sbjct: 296 GHSTCLSEGALSPDGTVLATASHDGF 321
Score = 38 (18.4 bits), Expect = 2.0e-07, Sum P(4) = 2.0e-07
Identities = 14/76 (18%), Positives = 31/76 (40%)
Query: 503 TQVLSHVPS--LDSDANNDKINIAPNDISRALNPSMFKHPTHLITPSEILMSASSSETTN 560
+Q LS + L+ ++ P +SR+L P + + T + S+ +
Sbjct: 1031 SQALSSAVAGRLERSVRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVESSMKENISK 1090
Query: 561 IIGGKNEEEVVVNSDA 576
++ KN + + + A
Sbjct: 1091 LLKSKNLTDAIARAAA 1106
>RGD|1562009 [details] [associations]
symbol:Edc4 "enhancer of mRNA decapping 4" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:1562009
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0000932 CTD:23644 eggNOG:NOG270061 HOGENOM:HOG000013082
HOVERGEN:HBG053855 KO:K12616 GeneTree:ENSGT00510000047791
EMBL:BC103628 IPI:IPI00421424 RefSeq:NP_001028240.3
UniGene:Rn.145173 ProteinModelPortal:Q3ZAV8 STRING:Q3ZAV8
PhosphoSite:Q3ZAV8 PRIDE:Q3ZAV8 Ensembl:ENSRNOT00000030967
GeneID:361399 KEGG:rno:361399 UCSC:RGD:1562009 NextBio:676162
ArrayExpress:Q3ZAV8 Genevestigator:Q3ZAV8 Uniprot:Q3ZAV8
Length = 1407
Score = 148 (57.2 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 60/228 (26%), Positives = 106/228 (46%)
Query: 775 RRLEASLGRGIEKAVKASTD-ALWARFHEENARNEKLLRDRTQ-------QITGLITNLI 826
+RL A L G++ V + AL R +E R E+ L + Q Q+T ++ +
Sbjct: 979 QRLCAQL-EGLQSTVTDHVERALETRHEQEQRRLERALAEGQQRGGQLQEQLTQQLSQAL 1037
Query: 827 NKDLTASLEKLVKKELA-AVGPAIVRTISPSIEKTITSAIVE-SFQRGVGDKAVNQLERS 884
+ + LE+ ++ E+ V P + R++ P + S + + G + +++L +S
Sbjct: 1038 SSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEGSMKENISKLLKS 1097
Query: 885 VNSRLEATVGRQIQAQFQTSGKHALQDALKSSVEASVIPAFEKSCKAMFEQVDATFQKGM 944
N L + R Q G +Q A + + ++ V+PAFEKSC+AMF+Q++ +F+ G
Sbjct: 1098 KN--LTDAIARAAADTLQ--GP--MQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGT 1151
Query: 945 VEHTTATLQHFES-------THSPLALVLRESV----NSVSSMAQTLS 981
E+ H +S P+ LR V N+ MA T+S
Sbjct: 1152 QEYLQQLDSHMKSRKAREQEAREPVLAQLRGLVSTLQNATEQMAATVS 1199
Score = 105 (42.0 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 27/105 (25%), Positives = 55/105 (52%)
Query: 87 QILALLNNNKSKHVGSTAPIYGKRVFGDYVAYDVDAVEEGREPTQQLEVNPITKYGSDPE 146
Q++ L ++ S +G I K V + VA ++ + ++++ P+ KY + +
Sbjct: 78 QVICLSGDDSSTCIG----ILAKEV--EIVASSDSSISSKARGSNKVKIQPVAKYDWEQK 131
Query: 147 LLIGRQIAVNKHYVCYGLKGGN-----VRVLNLNTATRSLLRGHT 186
G IAV+ ++ Y ++ N VRV++++T+ R+LL+G T
Sbjct: 132 YYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFT 176
Score = 98 (39.6 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 33/134 (24%), Positives = 55/134 (41%)
Query: 203 KPHGGQPVNSAQYL-TAPNQAGHI----ILVTAGPLNREVKLWASASEEGWSLPTHAESW 257
KPH G+P++ + Q + L+T NRE+K+W + S W
Sbjct: 341 KPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVS------------W 388
Query: 258 KCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRID 317
C QT+ V +V + A L+ ++ ++ +Y + L +
Sbjct: 389 TCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQDEGRACFS 448
Query: 318 YIAEFTVTMPVLSF 331
I+EF +T PVLSF
Sbjct: 449 SISEFLLTHPVLSF 462
Score = 66 (28.3 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 46/221 (20%), Positives = 82/221 (37%)
Query: 333 GTIDPPSEHIIKLYCVQTQAIQQYSLNLFQCLPPPAESGGLERPDSSVSNDANGSRLSEF 392
GT++ + +IKL+CV T+A+Q + FQ P + + P S+ + A+ +F
Sbjct: 496 GTLESAAGVLIKLFCVHTKALQDVQIR-FQ----PQLNPDVVAPLST--HTAH----EDF 544
Query: 393 LFPSSTSKPSF-SETTGAVRY---PQLSTSHEATTSQENLTSKTESQPLSLARTTSDTNV 448
F S+P SE + + P L E + L+ +E++P + T
Sbjct: 545 TF--GESRPELGSEGLASAPHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMTPT 602
Query: 449 VCVAXXXXXXXXXXXRKHSGSINPPNSSELGSLLNEPGGSQPIIDSSFDGKTDTTQVLSH 508
+ S S + +SS S +D S + LS
Sbjct: 603 ASLQQISASPSSSSSSSSSSSSSSSSSSSSSLTAVSAVSSSSAMDPSLPSRPPEELTLSP 662
Query: 509 VPSLDSD---ANNDKINIAPNDISRALNPSMFKHPTHLITP 546
LD +++ + +P R+L P + P + P
Sbjct: 663 KLQLDGSLTISSSSSLQASP----RSLLPGLLPGPADKLIP 699
Score = 47 (21.6 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 364 LPPPAESGGLE--RPDSSVSNDANGSRLSEFLFP---SSTSKP 401
L PA +E RP S+ + D NG + + L +STSKP
Sbjct: 22 LDRPAGGSNVESQRPSSAYNGDLNGLLVPDPLSSGDGNSTSKP 64
Score = 44 (20.5 bits), Expect = 8.8e-08, Sum P(4) = 8.8e-08
Identities = 14/71 (19%), Positives = 37/71 (52%)
Query: 811 LRDRTQQITGLITNLINKDLTASLE----KLVKKELAAVGPAIVRTISPSIEK---TITS 863
L++ T+Q+ +++ + ++ L L + LA V + +S ++++ T+TS
Sbjct: 1187 LQNATEQMAATVSSSVRAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQATVTS 1246
Query: 864 AIVESFQRGVG 874
+I+++ + G
Sbjct: 1247 SIMQAMRSAAG 1257
Score = 42 (19.8 bits), Expect = 1.4e-07, Sum P(4) = 1.4e-07
Identities = 25/126 (19%), Positives = 55/126 (43%)
Query: 743 AMQDMLNQLMTM--QKELQKQMSNLVTLPVTKEGRRLEASLG--RGIEKAVKASTDALWA 798
AM +N + Q+ LQ+ S++ + ++ R E L RG+ ++ +T+ + A
Sbjct: 1138 AMFQQINDSFRLGTQEYLQQLDSHMKSRKAREQEAR-EPVLAQLRGLVSTLQNATEQMAA 1196
Query: 799 RFHEENARNEKLLRDRTQQITGLITNLINKDLTASLEKLVKKELAAVGPAIVRTISPSIE 858
+R Q + + + + A ++++VK E++ T++ SI
Sbjct: 1197 TVSSS-------VRAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQATVTSSIM 1249
Query: 859 KTITSA 864
+ + SA
Sbjct: 1250 QAMRSA 1255
Score = 41 (19.5 bits), Expect = 1.7e-07, Sum P(4) = 1.7e-07
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 834 LEKLVKKELAAVGPAIVRTISPSIEKTITSAIVESFQRGVGDK 876
LE + +E+A + T +P I + S + ES + G+ +K
Sbjct: 817 LEAALTQEVATSDSQVWPT-APDITRETCSTLTESPRNGLQEK 858
Score = 38 (18.4 bits), Expect = 1.7e-15, Sum P(4) = 1.7e-15
Identities = 22/86 (25%), Positives = 38/86 (44%)
Query: 477 ELGS--LLNEPGGSQPIIDSSFDGKTDTTQVLSHVPSLDSDANNDKINIAPNDISRALNP 534
ELGS L + P GSQP D +++ +P A D ++++ + + P
Sbjct: 552 ELGSEGLASAPHGSQP----------DLRRIVE-LP-----APADFLSLSSETKPKLMTP 595
Query: 535 SMFKHPTHLITPSEILMSASSSETTN 560
F PT + S+SSS +++
Sbjct: 596 DAFMTPTASLQQISASPSSSSSSSSS 621
Score = 38 (18.4 bits), Expect = 2.6e-12, Sum P(4) = 2.6e-12
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 223 GHIILVTAGPLNREVKLWASASEEGW 248
GH ++ G L+ + + A+AS +G+
Sbjct: 295 GHSTCLSEGALSPDGTVLATASHDGF 320
Score = 38 (18.4 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 971 NSVSSMAQTLSGEFVDGQRKLFDLAGVRNNTSAFNPSVPLSNGPLLGLHEKVE 1023
+S SS + + S L ++ V +++SA +PS+P L L K++
Sbjct: 614 SSSSSSSSSSSSSSSSSSSSLTAVSAV-SSSSAMDPSLPSRPPEELTLSPKLQ 665
Score = 37 (18.1 bits), Expect = 4.2e-07, Sum P(4) = 4.2e-07
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 847 PAIVRTISPSIEKTITSAIVESFQRGVG 874
P ++ + S ++ + I E+ RG G
Sbjct: 735 PDVISSASTALSQDIPEIASEALSRGFG 762
Score = 37 (18.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 619 TDPRIGMAAK---C-AGTSAETCVAEEAQEVD 646
T P I + K C +G + TC+ A+EV+
Sbjct: 68 TMPPINLQEKQVICLSGDDSSTCIGILAKEVE 99
>MGI|MGI:2446249 [details] [associations]
symbol:Edc4 "enhancer of mRNA decapping 4" species:10090
"Mus musculus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2446249
GO:GO:0005634 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0000932
CTD:23644 eggNOG:NOG270061 HOGENOM:HOG000013082 HOVERGEN:HBG053855
KO:K12616 OrthoDB:EOG42JNQK GeneTree:ENSGT00510000047791
EMBL:AK146527 EMBL:AK152963 EMBL:BC022641 EMBL:BC053081
IPI:IPI00330066 IPI:IPI00831141 RefSeq:NP_853625.1 UniGene:Mm.28979
ProteinModelPortal:Q3UJB9 SMR:Q3UJB9 IntAct:Q3UJB9 STRING:Q3UJB9
PhosphoSite:Q3UJB9 PaxDb:Q3UJB9 PRIDE:Q3UJB9
Ensembl:ENSMUST00000119261 GeneID:234699 KEGG:mmu:234699
UCSC:uc009nek.1 UCSC:uc009nel.1 InParanoid:Q3UJB9 ChiTaRS:EDC4
NextBio:382293 Bgee:Q3UJB9 CleanEx:MM_EDC4 Genevestigator:Q3UJB9
Uniprot:Q3UJB9
Length = 1406
Score = 150 (57.9 bits), Expect = 6.3e-18, Sum P(4) = 6.3e-18
Identities = 57/224 (25%), Positives = 106/224 (47%)
Query: 775 RRLEASLGRGIEKAVKASTD-ALWARFHEENARNEKLLRDRTQ-------QITGLITNLI 826
+RL A L G++ V + AL R +E R E+ L + Q Q+T ++ +
Sbjct: 978 QRLCAQL-EGLQSTVTDHVERALETRHEQEQRRLERALAEGQQRGGQLQEQLTQQLSQAL 1036
Query: 827 NKDLTASLEKLVKKELA-AVGPAIVRTISPSIEKTITSAIVE-SFQRGVGDKAVNQLERS 884
+ + LE+ V+ E+ V P + R++ P + S + + G + +++L +S
Sbjct: 1037 SSAVAGRLERSVRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEGSMKENISKLLKS 1096
Query: 885 VNSRLEATVGRQIQAQFQTSGKHALQDALKSSVEASVIPAFEKSCKAMFEQVDATFQKGM 944
N L + R Q G +Q A + + ++ V+PAFEKSC+AMF+Q++ +F+ G
Sbjct: 1097 KN--LTDAIARAAADTLQ--GP--MQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGT 1150
Query: 945 VEHTTATLQHFES-------THSPLALVLRESVNSVSSMAQTLS 981
E+ H +S P+ LR V+++ S + ++
Sbjct: 1151 QEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMA 1194
Score = 105 (42.0 bits), Expect = 6.3e-18, Sum P(4) = 6.3e-18
Identities = 27/105 (25%), Positives = 55/105 (52%)
Query: 87 QILALLNNNKSKHVGSTAPIYGKRVFGDYVAYDVDAVEEGREPTQQLEVNPITKYGSDPE 146
Q++ L ++ S +G I K V + VA ++ + ++++ P+ KY + +
Sbjct: 78 QVICLSGDDSSTCIG----ILAKEV--EIVASSDSSISSKARGSNKVKIQPVAKYDWEQK 131
Query: 147 LLIGRQIAVNKHYVCYGLKGGN-----VRVLNLNTATRSLLRGHT 186
G IAV+ ++ Y ++ N VRV++++T+ R+LL+G T
Sbjct: 132 YYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFT 176
Score = 98 (39.6 bits), Expect = 6.3e-18, Sum P(4) = 6.3e-18
Identities = 33/134 (24%), Positives = 55/134 (41%)
Query: 203 KPHGGQPVNSAQYL-TAPNQAGHI----ILVTAGPLNREVKLWASASEEGWSLPTHAESW 257
KPH G+P++ + Q + L+T NRE+K+W + S W
Sbjct: 341 KPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVS------------W 388
Query: 258 KCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRID 317
C QT+ V +V + A L+ ++ ++ +Y + L +
Sbjct: 389 TCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQDEGRACFS 448
Query: 318 YIAEFTVTMPVLSF 331
I+EF +T PVLSF
Sbjct: 449 SISEFLLTHPVLSF 462
Score = 60 (26.2 bits), Expect = 6.3e-18, Sum P(4) = 6.3e-18
Identities = 52/232 (22%), Positives = 90/232 (38%)
Query: 333 GTIDPPSEHIIKLYCVQTQAIQQYSLNLFQCLPPPAESGGLERPDSSVSNDANGSRLSEF 392
G ++ + +IKL+CV T+A+Q + FQ P + + P S+ + A+ +F
Sbjct: 496 GALESAAGVLIKLFCVHTKALQDVQIR-FQ----PQLNPDVVAPLST--HTAH----EDF 544
Query: 393 LFPSSTSKPSF-SETTGAVRY---PQLSTSHEATTSQENLTSKTESQPLSLARTTSDTNV 448
F S+P SE + + P L E + L+ +E++P + T D +
Sbjct: 545 TF--GESRPELGSEGLASAAHGSQPDLRRIVELPAPADFLSLSSETKPELM---TPDAFM 599
Query: 449 VCVAXXXXXXXXXXXRKHSGSINPPNSSELGSLLNEPGG--SQPIIDSSFDGKTDTTQVL 506
A S S + +SS S L S +D S + L
Sbjct: 600 TPTASLQQISASPSSSSSSSSSSSSSSSSSSSSLTAVSAVSSSSAMDPSLPRPPEEL-TL 658
Query: 507 SHVPSLDSDANNDKINIAPNDISRALNPSMFKHPTH-LIT--PSEILMSASS 555
S LD + + + R+L P + P LI+ P ++ +AS+
Sbjct: 659 SPKLQLDGSLTLNSSSSSLQASPRSLLPGLLPGPADKLISKGPGQVSTAASA 710
Score = 46 (21.3 bits), Expect = 2.1e-07, Sum P(4) = 2.1e-07
Identities = 25/126 (19%), Positives = 56/126 (44%)
Query: 743 AMQDMLNQLMTM--QKELQKQMSNLVTLPVTKEGRRLEASLG--RGIEKAVKASTDALWA 798
AM +N + Q+ LQ+ S++ + ++ R E L RG+ ++++T+ + A
Sbjct: 1137 AMFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAR-EPVLAQLRGLVSTLQSATEQMAA 1195
Query: 799 RFHEENARNEKLLRDRTQQITGLITNLINKDLTASLEKLVKKELAAVGPAIVRTISPSIE 858
+R Q + + + + A ++++VK E++ T++ SI
Sbjct: 1196 TVSSS-------VRAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQATVTSSIM 1248
Query: 859 KTITSA 864
+ + SA
Sbjct: 1249 QAMRSA 1254
Score = 43 (20.2 bits), Expect = 4.2e-07, Sum P(4) = 4.2e-07
Identities = 14/71 (19%), Positives = 36/71 (50%)
Query: 811 LRDRTQQITGLITNLINKDLTASLE----KLVKKELAAVGPAIVRTISPSIEK---TITS 863
L+ T+Q+ +++ + ++ L L + LA V + +S ++++ T+TS
Sbjct: 1186 LQSATEQMAATVSSSVRAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQATVTS 1245
Query: 864 AIVESFQRGVG 874
+I+++ + G
Sbjct: 1246 SIMQAMRSAAG 1256
Score = 42 (19.8 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 365 PPPAESGGLERPDSSVSNDANGSRLSEFLFP---SSTSKP 401
P + +RP S+ + D NG + + L +ST+KP
Sbjct: 25 PAGGSNAESQRPSSAYNGDLNGLLVPDPLSSGDGNSTNKP 64
Score = 41 (19.5 bits), Expect = 6.6e-07, Sum P(4) = 6.6e-07
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 834 LEKLVKKELAAVGPAIVRTISPSIEKTITSAIVESFQRGVGDK 876
LE + +E+A + T +P I + S + ES + G+ +K
Sbjct: 816 LEAALTQEVATPDSQVWPT-APDITRETCSTLTESPRNGLQEK 857
Score = 38 (18.4 bits), Expect = 6.4e-12, Sum P(4) = 6.4e-12
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 223 GHIILVTAGPLNREVKLWASASEEGW 248
GH ++ G L+ + + A+AS +G+
Sbjct: 295 GHSTCLSEGALSPDGTVLATASHDGF 320
Score = 38 (18.4 bits), Expect = 9.7e-10, Sum P(4) = 9.7e-10
Identities = 50/233 (21%), Positives = 84/233 (36%)
Query: 263 LDLKSSAKPRV--EEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIA 320
L L S KP + +AF L Q +++ ++ S ++S+ T + ++
Sbjct: 582 LSLSSETKPELMTPDAFMTPTASLQQISASPSSSSSSSSSSSSSSS-SSSSSLTAVSAVS 640
Query: 321 EFTVTMPVLSFTG---TIDPPSEHIIKLYC-VQTQAIQQYSLNLFQ-CLPPPAESGGLER 375
+ P L T+ P + L + ++Q +L LP PA+ + +
Sbjct: 641 SSSAMDPSLPRPPEELTLSPKLQLDGSLTLNSSSSSLQASPRSLLPGLLPGPADKL-ISK 699
Query: 376 PDSSVSNDANGSRLS-EFLFPSSTSKPSFSETTGAVRYPQLSTSHEATTSQENLTSKTES 434
VS A+ L + + P + S S T R P + +S SQ+ + S
Sbjct: 700 GPGQVSTAASALSLDLQEVEPLGLPQASPSRT----RSPDVISSASTALSQD--IPEIAS 753
Query: 435 QPLSLARTTSDTNVVCVAXXXXXXXXXXXRKHSGSINPPNSSELGSLLNEPGG 487
+ LS +S + H S P ELGS L GG
Sbjct: 754 EALSRGFGSSVPEGLIEPNSMASAASAL---HLLSPRPRQGPELGSQLGLDGG 803
Score = 37 (18.1 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 847 PAIVRTISPSIEKTITSAIVESFQRGVG 874
P ++ + S ++ + I E+ RG G
Sbjct: 734 PDVISSASTALSQDIPEIASEALSRGFG 761
Score = 37 (18.1 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 619 TDPRIGMAAK---C-AGTSAETCVAEEAQEVD 646
T P I + K C +G + TC+ A+EV+
Sbjct: 68 TMPPINLQEKQVICLSGDDSSTCIGILAKEVE 99
>DICTYBASE|DDB_G0288241 [details] [associations]
symbol:DDB_G0288241 "Enhancer of mRNA-decapping
protein 4" species:44689 "Dictyostelium discoideum" [GO:0005813
"centrosome" evidence=TAS] InterPro:IPR001680 SMART:SM00320
dictyBase:DDB_G0288241 GO:GO:0005813 EMBL:AAFI02000109
eggNOG:NOG270061 RefSeq:XP_636840.1 EnsemblProtists:DDB0219320
GeneID:8626509 KEGG:ddi:DDB_G0288241 InParanoid:Q54J96 OMA:AYIIHIN
Uniprot:Q54J96
Length = 1476
Score = 174 (66.3 bits), Expect = 7.7e-18, Sum P(4) = 7.7e-18
Identities = 58/235 (24%), Positives = 119/235 (50%)
Query: 761 QMSNLVTLPVTKEGRRLEASLGRGIEKAVKASTDALWARFHEENARNEKLLRDRTQQITG 820
Q SN + + + +E +L +E+++ +A+ +E E + ++R +++
Sbjct: 1005 QQSNYTSNNIQQLFMEMENNLFNRLERSMANQ----FAQHEKERIEREAMEKERHEKLLT 1060
Query: 821 LITNLINKDLTASLEKLVKKELAAVGPAIVRTISPSIEKTITSAIVESFQRGVGDKAVNQ 880
++ I + ++LEK+VKKE+AA + +T+ ++E+TI I + + + K +
Sbjct: 1061 IVHQSITTMMKSNLEKIVKKEIAATFVNLEKTLPTTVEQTI-GKIAQDQLKKLSVKT-DT 1118
Query: 881 LERSVNSRLEATVGRQIQAQ-FQTSGKHALQDALKSSVEASVIPAFEKSCKAMFEQVDAT 939
L +S + + + V + I + F+ K+ ++ S ++ +IP FEKSC++MF+ + T
Sbjct: 1119 LLKSSSEAIVSNVKQLICSDIFEGLLKNQMETIFISYFQSILIPGFEKSCQSMFKHLSYT 1178
Query: 940 FQKGM---VEHTTATLQHFESTHSPLALVLRESVNSVSSMAQTLSGEFVDGQRKL 991
F+ G ++H T + Q H L +L E N+V T + V+ Q +L
Sbjct: 1179 FENGFNQAIQHQTLSSQ---GQHLALEKILNEG-NTVIKQCTT---QLVEQQDQL 1226
Score = 91 (37.1 bits), Expect = 7.7e-18, Sum P(4) = 7.7e-18
Identities = 29/96 (30%), Positives = 54/96 (56%)
Query: 92 LNNNKSK--HVGSTAPIYGKRVFGDYVAYDVDAVEEGREPTQQLEVNPITKYGSD-PEL- 147
LNN S H+G +YGK + ++++ ++ ++E +T+ + P
Sbjct: 116 LNNKNSAGLHLGLN--LYGKNI-------NINS-KKSLGSKLEVESQTVTRVQPNRPSSN 165
Query: 148 LIGRQIAVNKHYVCYGLKGGNVRVLNLNTATRSLLR 183
LIG I+VNK+++ Y +KG VR+L+ ++AT+ LL+
Sbjct: 166 LIGNLISVNKYFISYIIKGEKVRILDKSSATKILLK 201
Score = 82 (33.9 bits), Expect = 7.7e-18, Sum P(4) = 7.7e-18
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 1031 ELSRLVSDRKYEEAFTTALQRSDVSIVSWLCSQVDMHGLLSMXXXXXXXXXXXXXXXXXA 1090
+L LV + Y +AF AL S++ +V LCS +D + + S +
Sbjct: 1355 QLKALV-ETSYIDAFNFALNASNLQMVVSLCSCLDPYTVFS--SNKFPQTIILSLIQQLS 1411
Query: 1091 CDINKDTARKLAWLTDVAAAINPADPMIAVHARPIFEQVYQRL-HHQRSSPTISGAELSS 1149
++ DT KL W+ + ++ + + + I + +L HQ S+P + L S
Sbjct: 1412 INLYTDTELKLKWIKECLFVVDNSKADVT---KKILNVLKNKLDEHQNSNPNSNSHLLQS 1468
Query: 1150 IRLLI 1154
I+ +I
Sbjct: 1469 IKYII 1473
Score = 65 (27.9 bits), Expect = 7.7e-18, Sum P(4) = 7.7e-18
Identities = 46/225 (20%), Positives = 82/225 (36%)
Query: 283 VLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDPPSEHI 342
V+ Q+GL L + N + + NN+ ++ + V P S TI + I
Sbjct: 593 VVEQSGLYLDSLNSINGNNNNNNNNNNNNNSSNVGGNKNNGVLSPTSSTNATIGSEDDDI 652
Query: 343 IKLYCVQTQAIQQYSLNLFQCLPPPAESGGLERPDSSVSNDANGSRLSEFLFPSSTSKPS 402
K+ + ++ S LP P S D N +G + ++TS+
Sbjct: 653 NKIILLTPKSFTPSSPPPLS-LPEPDLSSSPTSDDPIFGNVVSGKGVVNNNTTTTTSEKP 711
Query: 403 FSETTGAVRYPQLSTSHEATTSQENLTSKTESQPLSLARTTSDTNVVCVAXXXXXXXXXX 462
E + A + T S+EN ++ T + + A TS N +
Sbjct: 712 KKEPSAA------RNLKKKTKSKENESNSTTTA--AAATNTSGNNSTPSSSSSSPNGTNS 763
Query: 463 XRKHSGSINPPNSSELGSLLNEPGGSQPIIDSSFDGKTDTTQVLS 507
+ ++PP + + ++ G + P KT TT+V S
Sbjct: 764 TTPSTTVLSPPLL--VNTTDDQSGSTSPASIKKVKPKTSTTKVTS 806
Score = 54 (24.1 bits), Expect = 9.9e-17, Sum P(4) = 9.9e-17
Identities = 22/86 (25%), Positives = 34/86 (39%)
Query: 370 SGGLERPDSSVSNDANGSRLSEFLF-PSSTSKPSFSETTGAVRYP---------QLSTSH 419
S L P ++ S + S F F P+ T++ + P Q TS
Sbjct: 927 SPSLSPPTTANSTSTTSNIPSSFFFSPTETNQDHINTNAPLPVLPPPPLSPPQQQQQTSS 986
Query: 420 EATTSQENLTSKTESQPLSLARTTSD 445
TT+ TS + SQP+ + TS+
Sbjct: 987 PTTTTAATTTSNSNSQPIQQSNYTSN 1012
Score = 52 (23.4 bits), Expect = 1.6e-16, Sum P(4) = 1.6e-16
Identities = 40/194 (20%), Positives = 73/194 (37%)
Query: 367 PAESGGLERPDSSVSNDANGSRLSEFLFPSSTSKPSFSETTGAVRYPQLSTSHEATTSQE 426
P+ + L++ S N++N S+T+ + + T+G P S+S T+
Sbjct: 715 PSAARNLKKKTKSKENESN----------STTTAAAATNTSGNNSTPSSSSSSPNGTNST 764
Query: 427 NLTSKTESQPLSLARTTSD----TNVVCVAXXXXXXXXXXXRKHSG--SINPPNSSELGS 480
++ S PL L TT D T+ + S S+N ++ E
Sbjct: 765 TPSTTVLSPPL-LVNTTDDQSGSTSPASIKKVKPKTSTTKVTSSSSNESLNTLDTKEKEK 823
Query: 481 LLNEPGGSQPIIDSSFDGKTDTTQVLSHVPSLDSDANNDKINIAPNDISRALNPSMFKHP 540
+ +I S+ T TT + PS + P+ ++ L + +P
Sbjct: 824 EKEKEKTPTKLIKSTTT--TTTTTSTTTTPSATTPTTTTPTKKTPSFVAPQLVIPL-TNP 880
Query: 541 THLITPSEILMSAS 554
+TPS+ L S +
Sbjct: 881 ASKLTPSKSLSSTN 894
Score = 45 (20.9 bits), Expect = 9.5e-05, Sum P(4) = 9.5e-05
Identities = 26/127 (20%), Positives = 54/127 (42%)
Query: 855 PSIEKTITSAIVESFQRGVGDKAVNQLERSVNSRLEATVGRQIQAQFQTSGKHALQDALK 914
P + TS ++ + + N+LERS+ ++ +I+ + +H + L
Sbjct: 1003 PIQQSNYTSNNIQQLFMEMENNLFNRLERSMANQFAQHEKERIEREAMEKERH---EKLL 1059
Query: 915 SSVEASVIPAFEKSC-KAMFEQVDATFQKGMVEHTTATLQHFESTHSPLALVLRESVNSV 973
+ V S+ + + K + +++ ATF +E T T E T +A ++ + +
Sbjct: 1060 TIVHQSITTMMKSNLEKIVKKEIAATFVN--LEKTLPTT--VEQTIGKIA---QDQLKKL 1112
Query: 974 SSMAQTL 980
S TL
Sbjct: 1113 SVKTDTL 1119
Score = 39 (18.8 bits), Expect = 1.3e-14, Sum P(5) = 1.3e-14
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 470 INPPNSSELGSLLNEPGGSQPIIDSSFDGKTDTTQVLSHVPSLDSDANNDKINIAPND 527
I+ NSS+ + G D DG D + SLD D NN+ IN N+
Sbjct: 439 ISDSNSSKAYIIHINSGKKDKSNDIIGDGSDDKDAI----NSLDGD-NNNNINSNNNN 491
Score = 37 (18.1 bits), Expect = 5.0e-15, Sum P(4) = 5.0e-15
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 395 PSSTSKPSFS-ETTGAVRYPQLSTSHEATTSQENLTSKTESQPLSLARTTSDTN 447
P+S PS S +T P STS ++T T P++ T+ TN
Sbjct: 880 PASKLTPSKSLSSTNVNSVPTSSTSQSSST--------TAPAPITTTTMTTATN 925
Score = 37 (18.1 bits), Expect = 1.3e-14, Sum P(5) = 1.3e-14
Identities = 21/101 (20%), Positives = 35/101 (34%)
Query: 677 SDSTMTTTFAQTGXXXXXXXXXXXXXXXXXXXCSPSSTVLN---LANLSNEXXXXXXXXX 733
S+ST T A +PS+TVL+ L N +++
Sbjct: 732 SNSTTTAAAATNTSGNNSTPSSSSSSPNGTNSTTPSTTVLSPPLLVNTTDDQSGSTSPAS 791
Query: 734 XX-----XXFSQVIAMQ--DMLNQLMTMQKELQKQMSNLVT 767
++V + + LN L T +KE +K+ T
Sbjct: 792 IKKVKPKTSTTKVTSSSSNESLNTLDTKEKEKEKEKEKTPT 832
>UNIPROTKB|F1NKX2 [details] [associations]
symbol:EDC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0000932
GeneTree:ENSGT00510000047791 EMBL:AADN02051667 EMBL:AADN02051668
EMBL:AADN02051669 IPI:IPI00591430 Ensembl:ENSGALT00000002498
OMA:SLMGHME Uniprot:F1NKX2
Length = 1398
Score = 150 (57.9 bits), Expect = 1.4e-17, Sum P(5) = 1.4e-17
Identities = 60/254 (23%), Positives = 123/254 (48%)
Query: 745 QDMLNQLMTMQKELQKQMSNLVTL--PVTKEGRRLEASLGRGIEKAVKASTDALWARFH- 801
++++ L + Q+EL + N + L +T +++SL +E+ + + + R
Sbjct: 945 EELMCVLRSQQRELSELRQNQMELLQRLTDHLDAVQSSLMGHMERVIDSQQEQEQRRLDR 1004
Query: 802 ---EENARNEKLLRDRTQQITGLITNLI-NKDLTASLEKLVKKELAAVGP-AIVRTISPS 856
E RN +L +QQ++ +++ + N+ LE+ V++E+ P I +++ P
Sbjct: 1005 ALTEGQQRNGQLQEHLSQQLSQTLSSAVCNR-----LERTVREEMKKTVPQCISKSVDP- 1058
Query: 857 IEKTITSAIVESFQ--RGVGDKAVNQLERSVNSRLEATVGRQIQAQFQTSGKHALQDALK 914
+ ++S I G + + +L +S N L +V R Q G +Q A +
Sbjct: 1059 VAGQLSSTIATKLTAVEGTLKENITKLVKSKN--LTDSVVRATADTLQ--GP--IQSAYR 1112
Query: 915 SSVEASVIPAFEKSCKAMFEQVDATFQKGMVEHTTATLQHFES-------THSPLALVLR 967
+ ++ V+PAFEKSC++MF+Q++ TF++G E+ H ++ PL LR
Sbjct: 1113 EAFQSVVLPAFEKSCQSMFQQINDTFKQGTQEYIQQLETHMKNKKAREQEARDPLLNQLR 1172
Query: 968 ESVNSVSSMAQTLS 981
+ +++ S + L+
Sbjct: 1173 QLISTFQSSTEQLA 1186
Score = 133 (51.9 bits), Expect = 8.2e-16, Sum P(5) = 8.2e-16
Identities = 82/407 (20%), Positives = 171/407 (42%)
Query: 744 MQDMLNQLMTMQKELQKQMSNLVTLPVTKEGRRLEASLGRGIEKAVKAST-DALWARFHE 802
M M + + Q++ Q+++ +T + G+ L+ L + + + + ++ + L E
Sbjct: 984 MGHMERVIDSQQEQEQRRLDRALTEGQQRNGQ-LQEHLSQQLSQTLSSAVCNRLERTVRE 1042
Query: 803 ENARN-EKLLRDRTQQITGLITNLINKDLTA-------SLEKLVKKELAAVGPAIVRTIS 854
E + + + + G +++ I LTA ++ KLVK + + ++VR +
Sbjct: 1043 EMKKTVPQCISKSVDPVAGQLSSTIATKLTAVEGTLKENITKLVKSK--NLTDSVVRATA 1100
Query: 855 PSIEKTITSAIVESFQRGV---GDKAVNQLERSVNSRLEATVGRQIQAQFQTSGKHALQD 911
+++ I SA E+FQ V +K+ + + +N + IQ Q +T K+
Sbjct: 1101 DTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINDTFKQGTQEYIQ-QLETHMKNK--- 1156
Query: 912 ALKSSVEASVIPAFEKSCKAMFEQVDATFQKG--MVEHTTATLQHFESTHSPLALV--LR 967
K+ + + P + Q+ +TFQ + T A H E H +V L+
Sbjct: 1157 --KAREQEARDPLLNQ-----LRQLISTFQSSTEQLASTIAANIHAEVQHQLHIIVGNLQ 1209
Query: 968 ESVNSVSSMAQTLSGEFVDGQRKLFDLAGVRNNTSAFNPSVPLSNG-PLLGLHEKVEATM 1026
ES+ ++ + + + GE ++ A V TS+ ++ + G P+ H ++
Sbjct: 1210 ESI--LTQVQRVIKGEVSLAMKE--QQAAV---TSSIVQAMRSAAGTPIPSTHLDFQSQQ 1262
Query: 1027 DPTKELSRLVSDRKYEEAFTTALQRSDVSIVSWLCSQVDMHGLLSMXXXXXXXXXXXXXX 1086
+ +L+ +AF AL +D+++V ++C VD +
Sbjct: 1263 T---HILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQQPCPLSQPVLLSLI 1319
Query: 1087 XXXACDINKDTARKLAWLTDVAAAINPADPMIAVHARPIFEQVYQRL 1133
+ D+ T KL +L + ++ +DP+ H + QV Q+L
Sbjct: 1320 QQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMSQVRQKL 1366
Score = 96 (38.9 bits), Expect = 1.4e-17, Sum P(5) = 1.4e-17
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 114 DYVAYDVDAVEEGREPTQQLEVNPITKYGSDPELLIGRQIAVNKHYVCYGLKGGN----- 168
+ VA ++ + ++++ P+ +Y + + G IAV+ Y+ Y ++ +
Sbjct: 91 EIVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAM 150
Query: 169 VRVLNLNTATRSLLRGHT 186
VRVL+++TA R+LL+G T
Sbjct: 151 VRVLSVSTAERTLLKGFT 168
Score = 94 (38.1 bits), Expect = 1.4e-17, Sum P(5) = 1.4e-17
Identities = 35/138 (25%), Positives = 58/138 (42%)
Query: 203 KPHGGQPVNSAQYL-TAPNQAGHI----ILVTAGPLNREVKLWASASEEGWSLPTHAESW 257
KPH G+P++ + Q + L+T NRE+K+W + S W
Sbjct: 333 KPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVS------------W 380
Query: 258 KCTQTLDLKSSAKPRVEEAFF---NQVVVLS-QAGLLLFANAKKNAIYSVHLGYGNNSAA 313
C QT+ +S P + + + V L A L+ ++ ++ +Y + L
Sbjct: 381 TCLQTV--RSRFSPDIFSSMSILPSLKVCLDLSAEYLILSDVQRKVLYVMELMQNQEKGK 438
Query: 314 TRIDYIAEFTVTMPVLSF 331
I+EF +T PVLSF
Sbjct: 439 AYFSSISEFLLTHPVLSF 456
Score = 72 (30.4 bits), Expect = 1.4e-17, Sum P(5) = 1.4e-17
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 333 GTIDPPSEHIIKLYCVQTQAIQQYSLNLFQCLPPPAESGGLERPDSSVSNDANGSRLSEF 392
G ++ + +IKL+CV T+A+Q + FQ P S PD S ++GS EF
Sbjct: 490 GAVESAAGVLIKLFCVHTKALQDVQIR-FQ----PLHS-----PDMGASVPSHGSH-EEF 538
Query: 393 LFP 395
FP
Sbjct: 539 AFP 541
Score = 45 (20.9 bits), Expect = 3.6e-07, Sum P(4) = 3.6e-07
Identities = 20/81 (24%), Positives = 36/81 (44%)
Query: 841 ELAAVGPAIVRTISPSIEKT--ITSAIVESFQRGVGDKAVNQLERSVNSRLEATVGRQIQ 898
EL V P +V SP+ E++ + S+ + + + + A L+RS A +
Sbjct: 697 ELQEVEPLVVPQASPTRERSPDVISSASTAMSQDIPEIASETLQRSF-----AAAPPALS 751
Query: 899 AQFQTSGKHALQDALKSSVEA 919
A+ HA D++ S+ A
Sbjct: 752 AEVLEPSHHA--DSMASAASA 770
Score = 45 (20.9 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 26/117 (22%), Positives = 51/117 (43%)
Query: 514 SDANNDKIN--IAPNDISRALNPSMFKHPTH------LITPSEIL-MSASSSETTNIIGG 564
S + N +N + P+ + P++ K P H + +++ +S S T +I
Sbjct: 29 SSSYNGDLNGLLVPDPLVAGDGPALAK-PVHRSISLGAVQEKQVICLSGDDSSTCIVISA 87
Query: 565 KNEEEVVVNSDAG-----NAEVEVKVLDETRFTHDEFGSRGESQNLVSENREKYLRY 616
K + E+V +SD+ +VK+ R+ ++ G NL++ + YL Y
Sbjct: 88 K-DVEIVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYG---NLIAVSNS-YLAY 139
Score = 44 (20.5 bits), Expect = 4.5e-07, Sum P(4) = 4.5e-07
Identities = 9/46 (19%), Positives = 23/46 (50%)
Query: 812 RDRTQQITGLITNLINKDLTASLEKLVKKELAAVGPAI-VRTISPS 856
R+R+ + + +++D+ + +++ AA PA+ + PS
Sbjct: 713 RERSPDVISSASTAMSQDIPEIASETLQRSFAAAPPALSAEVLEPS 758
Score = 42 (19.8 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 374 ERPDSSVSNDANGSRLSEFLFPS---STSKPSF-SETTGAVRYPQL 415
+RP SS + D NG + + L + +KP S + GAV+ Q+
Sbjct: 26 QRPSSSYNGDLNGLLVPDPLVAGDGPALAKPVHRSISLGAVQEKQV 71
Score = 41 (19.5 bits), Expect = 1.4e-17, Sum P(5) = 1.4e-17
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 632 TSAETCVAEEAQEVDGAGIMETLAQPPCNDEAEVEDSTQDLDGGVS 677
+SA T ++++ E+ + + A P AEV + + D S
Sbjct: 721 SSASTAMSQDIPEIASETLQRSFAAAPPALSAEVLEPSHHADSMAS 766
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 12/65 (18%), Positives = 26/65 (40%)
Query: 512 LDSDANNDKINIAPNDISRALNPSMFKHPTHLITPSEILMSASSSETTNIIGGKNEEEVV 571
L+ + P IS++++P + + + T + T ++ KN + V
Sbjct: 1036 LERTVREEMKKTVPQCISKSVDPVAGQLSSTIATKLTAVEGTLKENITKLVKSKNLTDSV 1095
Query: 572 VNSDA 576
V + A
Sbjct: 1096 VRATA 1100
Score = 38 (18.4 bits), Expect = 4.4e-12, Sum P(5) = 4.4e-12
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 223 GHIILVTAGPLNREVKLWASASEEGW 248
GH ++ G L+ + + A+AS +G+
Sbjct: 287 GHSTYLSEGALSPDGTVLATASHDGF 312
>UNIPROTKB|E2RKN5 [details] [associations]
symbol:EDC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0000932 CTD:23644 KO:K12616
GeneTree:ENSGT00510000047791 OMA:ESPRNGL EMBL:AAEX03004122
RefSeq:XP_546871.3 Ensembl:ENSCAFT00000032394 GeneID:489751
KEGG:cfa:489751 Uniprot:E2RKN5
Length = 1400
Score = 150 (57.9 bits), Expect = 6.6e-16, Sum P(5) = 6.6e-16
Identities = 55/244 (22%), Positives = 112/244 (45%)
Query: 745 QDMLNQLMTMQKELQK----QMSNLVTLPVTKEGRRLEASLGRGIEKAVKASTDALWARF 800
+D L + Q+EL + Q L L EG L++++ +E+A+++ + R
Sbjct: 947 EDWLALIWQQQRELAELRHSQEELLQRLCTQLEG--LQSTVTGHVERALESRHEQEQRRL 1004
Query: 801 HEENARNEKLLRDRTQQITGLITNLINKDLTASLEKLVKKELA-AVGPAIVRTISPSIEK 859
A ++ +Q+T ++ ++ + LE+ ++ E+ V P + R++ P +
Sbjct: 1005 ERALAEGQQRGGQLQEQLTQQLSQALSSAIAGRLERSIRDEIKKTVPPCVSRSLEPVAGQ 1064
Query: 860 TITSAIVE-SFQRGVGDKAVNQLERSVNSRLEATVGRQIQAQFQTSGKHALQDALKSSVE 918
S + + G + +++L +S N L + R Q G +Q A + + +
Sbjct: 1065 LSNSVATKLTAVEGSMKENISKLLKSKN--LTDAIARAAADTLQ--GP--MQAAYREAFQ 1118
Query: 919 ASVIPAFEKSCKAMFEQVDATFQKGMVEHTTATLQHFESTHSPLALVLRESVNSVSSMAQ 978
+ V+PAFEKSC+AMF+Q++ +F+ G E+ H +S + + + +
Sbjct: 1119 SVVLPAFEKSCQAMFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVS 1178
Query: 979 TLSG 982
TL G
Sbjct: 1179 TLQG 1182
Score = 127 (49.8 bits), Expect = 1.6e-13, Sum P(5) = 1.6e-13
Identities = 91/438 (20%), Positives = 170/438 (38%)
Query: 739 SQVIAMQDMLNQLMTMQKELQKQMSNLVTLPVTKEGRRLEASLGRGIEKAVKAS---TDA 795
SQ +Q + QL +Q + + + +E RRLE +L G ++ + T
Sbjct: 966 SQEELLQRLCTQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQEQLTQQ 1025
Query: 796 LWARFHEENA-RNEKLLRDRTQQITGLITNLINKDLTASLEKLVKKELAAVGPAIVRTIS 854
L A R E+ +RD ++ + + + L V +L AV ++ IS
Sbjct: 1026 LSQALSSAIAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEGSMKENIS 1085
Query: 855 PSIE-KTITSAIVESFQRGVGDKAVNQLERSVNSRLEATV----GRQIQAQFQT---SGK 906
++ K +T AI R D ++ + ++ V + QA FQ S +
Sbjct: 1086 KLLKSKNLTDAIA----RAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFR 1141
Query: 907 HALQDALKSSVEASVIP--AFEKSCK----AMFEQVDATFQKGMVEHTTATLQHFESTHS 960
Q+ L+ +E+ + A E+ + A + +T Q G E AT+ S +
Sbjct: 1142 LGTQEYLQQ-LESHMKSRKAREQEAREPVLAQLRGLVSTLQ-GATEQMAATVS--SSVRA 1197
Query: 961 PLALVLRESVNSVSSMAQTLSGEFVDGQRKLFDLAGVRNNTSAFNPSVPLSNG-PLLGLH 1019
+ L +V S+ V G+ + TS+ ++ + G P+ H
Sbjct: 1198 EVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPAAH 1257
Query: 1020 EKVEATMDPTKELSRLVSDRKYEEAFTTALQRSDVSIVSWLCSQVDMHGLLSMXXXXXXX 1079
+A + +L+ +AF AL +D+++V ++C VD +
Sbjct: 1258 LDCQAQQ---AHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQ 1314
Query: 1080 XXXXXXXXXXACDINKDTARKLAWLTDVAAAINPADPMIAVHARPIFEQVYQRLHH-QRS 1138
A D+ T KL++L + ++ +DP+ H + QV Q+L ++
Sbjct: 1315 PVLLSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQA 1374
Query: 1139 SPTIS-GAELSSIRLLIH 1155
P S G + L++H
Sbjct: 1375 EPHNSLGKVARRLSLMLH 1392
Score = 106 (42.4 bits), Expect = 6.6e-16, Sum P(5) = 6.6e-16
Identities = 27/105 (25%), Positives = 55/105 (52%)
Query: 87 QILALLNNNKSKHVGSTAPIYGKRVFGDYVAYDVDAVEEGREPTQQLEVNPITKYGSDPE 146
Q++ L ++ S +G I K V + VA ++ + ++++ P+ KY + +
Sbjct: 79 QVICLTGDDSSTCIG----ILAKEV--EIVASSDSSISSKARGSNKVKIQPVAKYDWEQK 132
Query: 147 LLIGRQIAVNKHYVCYGLKGGN-----VRVLNLNTATRSLLRGHT 186
G IAV+ ++ Y ++ N VRV++++T+ R+LL+G T
Sbjct: 133 YYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFT 177
Score = 89 (36.4 bits), Expect = 6.6e-16, Sum P(5) = 6.6e-16
Identities = 32/134 (23%), Positives = 53/134 (39%)
Query: 203 KPHGGQPVNSAQYL-TAPNQAGHI----ILVTAGPLNREVKLWASASEEGWSLPTHAESW 257
KPH G+ ++ + Q + L+T NRE+K+W + S W
Sbjct: 342 KPHDGRSLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVS------------W 389
Query: 258 KCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRID 317
C QT+ V +V + A L+ ++ ++ +Y + L
Sbjct: 390 TCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQEEGRACFS 449
Query: 318 YIAEFTVTMPVLSF 331
I+EF +T PVLSF
Sbjct: 450 SISEFLLTHPVLSF 463
Score = 54 (24.1 bits), Expect = 6.6e-16, Sum P(5) = 6.6e-16
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 333 GTIDPPSEHIIKLYCVQTQAIQQYSLNLFQ 362
G ++ + +IKL+CV T+A+Q + FQ
Sbjct: 497 GAMESAAGVLIKLFCVHTKALQDVQIR-FQ 525
Score = 39 (18.8 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 834 LEKLVKKELAAVGPAIVRTISPSIEKTITSAIVESFQRGVGDK 876
LE + +E A + T +P I + S++ ES + G+ +K
Sbjct: 810 LEAALTQEATAPDNQVWPT-APDITRETCSSLAESPRNGLQEK 851
Score = 38 (18.4 bits), Expect = 6.8e-11, Sum P(5) = 6.8e-11
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 223 GHIILVTAGPLNREVKLWASASEEGW 248
GH ++ G L+ + + A+AS +G+
Sbjct: 296 GHSTCLSEGALSPDGTVLATASHDGF 321
Score = 37 (18.1 bits), Expect = 6.6e-16, Sum P(5) = 6.6e-16
Identities = 20/76 (26%), Positives = 32/76 (42%)
Query: 466 HSGSINPPNSSELGSLLNEPGGSQPIIDSSFDG-KTDTTQVLSHVPSLDSDANNDKINIA 524
H S P ELGS L GG DG + T +L + ++ A ++++
Sbjct: 776 HLLSPRPRPGPELGSQLGLDGGPG-------DGDRHSTPSLLEAALTQEATAPDNQVWPT 828
Query: 525 PNDISRALNPSMFKHP 540
DI+R S+ + P
Sbjct: 829 APDITRETCSSLAESP 844
Score = 37 (18.1 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 847 PAIVRTISPSIEKTITSAIVESFQRGVGDKAVNQLE 882
P ++ + S ++ + I E+ RG A LE
Sbjct: 729 PDVISSASTALSQDIPEIASEALSRGFVSSAPEGLE 764
>ZFIN|ZDB-GENE-030131-5032 [details] [associations]
symbol:edc4 "enhancer of mRNA decapping 4"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5032
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0000932 EMBL:BX927240 IPI:IPI00490539 RefSeq:NP_001038550.1
UniGene:Dr.106523 ProteinModelPortal:Q1LUT1 STRING:Q1LUT1
GeneID:565659 KEGG:dre:565659 CTD:23644 eggNOG:NOG270061
HOGENOM:HOG000013082 HOVERGEN:HBG053855 InParanoid:Q1LUT1 KO:K12616
OrthoDB:EOG42JNQK NextBio:20885989 ArrayExpress:Q1LUT1
Uniprot:Q1LUT1
Length = 1384
Score = 124 (48.7 bits), Expect = 3.2e-14, Sum P(4) = 3.2e-14
Identities = 78/414 (18%), Positives = 160/414 (38%)
Query: 739 SQVIAMQDMLNQLMTMQKELQKQMSNLVTLPVTKEGRRLEASLGRGIEKAVKASTDALWA 798
+Q+ +Q + + + +Q + + + + +E RR+E L G + + D L
Sbjct: 953 NQLDLLQRVTSHMDAVQSSMMAHIEHAMLAQQEQEQRRMERILVEGQSRNQQLQ-DQLVQ 1011
Query: 799 RFHE--ENA---RNEKLLRDRTQQITGLITNLINKDLTASLEKLVKKELAAVGPAIVRTI 853
+ + N+ R EK+LR+ ++ + + +T + + +L AV A+ +
Sbjct: 1012 QLVQTLNNSLCNRLEKVLREEMKKTVPQTISKSLEPVTGQMNSTIAAKLTAVEGALKENV 1071
Query: 854 SPSIE-KTITSAIVESFQRGVGDKAVNQLERSVNSRLEATVGRQIQAQFQTSGKHALQDA 912
+ ++ K T AI + + + + S + R Q+ FQ + D+
Sbjct: 1072 TKVVKSKNTTDAIGRAAAEAMQGPIQAAYKETFQSIVLPVFERGCQSMFQQ-----INDS 1126
Query: 913 LKSSVEASVIPAFEKSCKAMFEQVDATFQKGMVEHTTATLQHFESTHSPLALVLRESVNS 972
K I E K +Q D + ++ + +S+ LA + SV+S
Sbjct: 1127 FKQGTN-EYIQQLETHIKNR-KQRDQDTRDPVIGQLQQMIDSLQSSQDQLASTVTASVSS 1184
Query: 973 -VSSMAQTLSGEFVDG-----QRKL---FDLAGVRNN---TSAFNPSVPLSNG-PLLGLH 1019
V + G D QR + LA TS+ ++ + G P+ H
Sbjct: 1185 DVQHQLHMIVGNLQDSILTQVQRIVKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPVPSAH 1244
Query: 1020 EKVEATMDPTKELSRLVSDRKYEEAFTTALQRSDVSIVSWLCSQVDMHGLLSMXXXXXXX 1079
+A + +L+ + EAF AL +D+++V ++C +D +
Sbjct: 1245 LDYQAQQ---ASILQLLQQGQLNEAFQQALSAADLNLVLYVCETIDSQQVFGQQPCPLHQ 1301
Query: 1080 XXXXXXXXXXACDINKDTARKLAWLTDVAAAINPADPMIAVHARPIFEQVYQRL 1133
+ +++ T K+++L D ++ DP+ H + QV Q+L
Sbjct: 1302 AVLLSLIQQLSTNLSTRTELKISYLEDAVMNLDHGDPVTRDHMSAVLTQVRQKL 1355
Score = 106 (42.4 bits), Expect = 3.2e-14, Sum P(4) = 3.2e-14
Identities = 21/69 (30%), Positives = 41/69 (59%)
Query: 122 AVEEGREPTQQLEVNPITKYGSDPELLIGRQIAVNKHYVCYGLKGGN----VRVLNLNTA 177
+++ + ++++ P+ KY + + G IAV+ Y+ Y ++G N +RVL+L++
Sbjct: 105 SIDSKARGSNKVKIQPVAKYDWEHKYYYGNLIAVSNTYLAYAIRGANNHSMIRVLHLSST 164
Query: 178 TRSLLRGHT 186
RSLL+G T
Sbjct: 165 ERSLLKGFT 173
Score = 84 (34.6 bits), Expect = 3.2e-14, Sum P(4) = 3.2e-14
Identities = 32/135 (23%), Positives = 55/135 (40%)
Query: 203 KPHGGQPVNSAQYLTA-----PNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESW 257
+PH GQP++ + P+ L+T N+E+K+W + S W
Sbjct: 338 QPHNGQPLSCLLFCDNHKKQDPDVPFWRFLITGADQNQELKMWCTVS------------W 385
Query: 258 KCTQTLDLKSSAKPRVEEAFFNQVVVLS-QAGLLLFANAKKNAIYSVHLGYGNNSAATRI 316
C QT+ + S P + L A L+ ++ ++ +Y + L
Sbjct: 386 TCLQTI--RFSPDPFNCGVLPSLKASLDLSAEFLILSDVQRKVLYVMELLQDQEKGRASF 443
Query: 317 DYIAEFTVTMPVLSF 331
++EF +T PVLSF
Sbjct: 444 TAVSEFLLTHPVLSF 458
Score = 63 (27.2 bits), Expect = 3.2e-14, Sum P(4) = 3.2e-14
Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 333 GTIDPPSEHIIKLYCVQTQAIQQYSLNLFQCLPPPAESGGLERPDSSVSND 383
GT + S IKLYCV T+++Q + FQ P +S L P S S D
Sbjct: 490 GTSESRSGIQIKLYCVHTKSLQDVQI-WFQ--PNQGDSSSLFMPQSG-SQD 536
Score = 57 (25.1 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 21/88 (23%), Positives = 40/88 (45%)
Query: 841 ELAAVGPAIVRTISPSIEKT--ITSAIVESFQRGVGDKAVNQLERSVNSRLEATVGRQIQ 898
+L A+ P +V SP+ ++ + S+ + + + + A L+R + S A G +
Sbjct: 680 DLQAIDPMVVPQASPTRARSPDVISSASTAMSQDIPEIASETLQRGL-SGANADSGPILH 738
Query: 899 AQFQTSGK---HALQDALKSSVEASVIP 923
+ S H L +SS E S++P
Sbjct: 739 SDSMASAASILHLLSPRARSSAEHSLLP 766
Score = 44 (20.5 bits), Expect = 2.9e-06, Sum P(4) = 2.9e-06
Identities = 26/112 (23%), Positives = 44/112 (39%)
Query: 890 EATVGRQIQAQFQTSGKHALQDALKSSV-EASVIPAFEKSC-KAMFEQVDATFQKGM--V 945
E++ RQI++Q T + L L+S E + + + + + +DA M +
Sbjct: 917 ESSQSRQIESQMSTEVQDELLQMLRSQQREIAELRQNQLDLLQRVTSHMDAVQSSMMAHI 976
Query: 946 EHTTATLQHFESTHSPLALVLRESVNS------VSSMAQTLSGEFVDGQRKL 991
EH Q E LV +S N V + QTL+ + K+
Sbjct: 977 EHAMLAQQEQEQRRMERILVEGQSRNQQLQDQLVQQLVQTLNNSLCNRLEKV 1028
Score = 42 (19.8 bits), Expect = 4.7e-10, Sum P(4) = 4.7e-10
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 192 ED-SKVAPLIILKPHGGQ-PVNSAQYLTA-PNQAGHIILVTAGPLNREVKLWASASEEGW 248
ED ++V L IL+ + PV++ + GH ++ G L+ + + A+AS +G+
Sbjct: 258 EDRAEVWDLDILRSNNSSWPVDATELKEGFITIRGHAARISEGALSPDGTVLATASHDGY 317
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 9/47 (19%), Positives = 19/47 (40%)
Query: 525 PNDISRALNPSMFKHPTHLITPSEILMSASSSETTNIIGGKNEEEVV 571
P IS++L P + + + + A T ++ KN + +
Sbjct: 1038 PQTISKSLEPVTGQMNSTIAAKLTAVEGALKENVTKVVKSKNTTDAI 1084
>UNIPROTKB|Q6P2E9 [details] [associations]
symbol:EDC4 "Enhancer of mRNA-decapping protein 4"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0043928 "exonucleolytic
nuclear-transcribed mRNA catabolic process involved in
deadenylation-dependent decay" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 GO:GO:0010467 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0000932 EMBL:CH471092
GO:GO:0043928 EMBL:AC040162 CTD:23644 eggNOG:NOG270061
HOVERGEN:HBG053855 KO:K12616 OrthoDB:EOG42JNQK OMA:ESPRNGL
EMBL:L26339 EMBL:AK128582 EMBL:AK291049 EMBL:BC043616 EMBL:BC053598
EMBL:BC064567 EMBL:U17474 IPI:IPI00376317 IPI:IPI00641449
PIR:I52882 RefSeq:NP_055144.3 UniGene:Hs.75682
ProteinModelPortal:Q6P2E9 SMR:Q6P2E9 DIP:DIP-31192N IntAct:Q6P2E9
STRING:Q6P2E9 PhosphoSite:Q6P2E9 DMDM:74758241 PaxDb:Q6P2E9
PRIDE:Q6P2E9 Ensembl:ENST00000358933 GeneID:23644 KEGG:hsa:23644
UCSC:uc002eur.3 GeneCards:GC16P067906 HGNC:HGNC:17157 HPA:HPA041164
MIM:606030 neXtProt:NX_Q6P2E9 PharmGKB:PA145148958
InParanoid:Q6P2E9 PhylomeDB:Q6P2E9 GenomeRNAi:23644 NextBio:46453
PMAP-CutDB:Q6P2E9 ArrayExpress:Q6P2E9 Bgee:Q6P2E9 CleanEx:HS_EDC4
Genevestigator:Q6P2E9 Uniprot:Q6P2E9
Length = 1401
Score = 152 (58.6 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 63/246 (25%), Positives = 115/246 (46%)
Query: 760 KQMSNLVTLPVTKEG--RRLEASLGRGIEKAVKASTD-ALWARFHEENARNEKLLRDRTQ 816
+Q L L ++E +RL L G++ V + AL R +E R E+ L + Q
Sbjct: 956 QQQRELAELRHSQEELLQRLCTQL-EGLQSTVTGHVERALETRHEQEQRRLERALAEGQQ 1014
Query: 817 -------QITGLITNLINKDLTASLEKLVKKELA-AVGPAIVRTISPSIEKTITSAIVE- 867
Q+T ++ ++ + LE+ ++ E+ V P + R++ P + S +
Sbjct: 1015 RGGQLQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPMAGQLSNSVATKL 1074
Query: 868 SFQRGVGDKAVNQLERSVNSRLEATVGRQIQAQFQTSGKHALQDALKSSVEASVIPAFEK 927
+ G + +++L +S N L + R Q G +Q A + + ++ V+PAFEK
Sbjct: 1075 TAVEGSMKENISKLLKSKN--LTDAIARAAADTLQ--GP--MQAAYREAFQSVVLPAFEK 1128
Query: 928 SCKAMFEQVDATFQKGMVEHTTATLQHFES-------THSPLALVLRESVNSVSS----M 976
SC+AMF+Q++ +F+ G E+ H +S P+ LR V+++ S M
Sbjct: 1129 SCQAMFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQM 1188
Query: 977 AQTLSG 982
A T++G
Sbjct: 1189 AATVAG 1194
Score = 126 (49.4 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 90/437 (20%), Positives = 174/437 (39%)
Query: 739 SQVIAMQDMLNQLMTMQKELQKQMSNLVTLPVTKEGRRLEASLGRGIEKAVKAS---TDA 795
SQ +Q + QL +Q + + + +E RRLE +L G ++ + T
Sbjct: 967 SQEELLQRLCTQLEGLQSTVTGHVERALETRHEQEQRRLERALAEGQQRGGQLQEQLTQQ 1026
Query: 796 LWARFHEENA-RNEKLLRDRTQQITGLITNLINKDLTASLEKLVKKELAAVGPAIVRTIS 854
L A R E+ +RD ++ + + + L V +L AV ++ IS
Sbjct: 1027 LSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPMAGQLSNSVATKLTAVEGSMKENIS 1086
Query: 855 PSIE-KTITSAIVESFQRGVGDKAVNQLERSVNSRLEATV----GRQIQAQFQT---SGK 906
++ K +T AI R D ++ + ++ V + QA FQ S +
Sbjct: 1087 KLLKSKNLTDAIA----RAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFR 1142
Query: 907 HALQDALKSSVEASVIPAFEKSCKAMFEQVDATFQKGMVEHTTATLQHFEST--HSPLAL 964
Q+ L+ +E+ + + +A E V A +G+V + + +T S A
Sbjct: 1143 LGTQEYLQQ-LESHMKSRKAREQEAR-EPVLAQL-RGLVSTLQSATEQMAATVAGSVRAE 1199
Query: 965 VLRESVNSVSSMAQTLSGE---FVDGQRKLFDLAGVRNNTSAFNPSVPLSNG-PLLGLHE 1020
V + +V S+ +++ + V G+ + TS+ ++ + G P+ H
Sbjct: 1200 VQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHL 1259
Query: 1021 KVEATMDPTKELSRLVSDRKYEEAFTTALQRSDVSIVSWLCSQVDMHGLLSMXXXXXXXX 1080
+A + +L+ +AF AL +D+++V ++C VD +
Sbjct: 1260 DCQAQQ---AHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQP 1316
Query: 1081 XXXXXXXXXACDINKDTARKLAWLTDVAAAINPADPMIAVHARPIFEQVYQRLHH-QRSS 1139
A D+ T KL++L + ++ +DP+ H + QV Q+L ++
Sbjct: 1317 VLLSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAE 1376
Query: 1140 PTIS-GAELSSIRLLIH 1155
P S G + L++H
Sbjct: 1377 PHNSLGKAARRLSLMLH 1393
Score = 105 (42.0 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 27/105 (25%), Positives = 55/105 (52%)
Query: 87 QILALLNNNKSKHVGSTAPIYGKRVFGDYVAYDVDAVEEGREPTQQLEVNPITKYGSDPE 146
Q++ L ++ S +G I K V + VA ++ + ++++ P+ KY + +
Sbjct: 78 QVICLSGDDSSTCIG----ILAKEV--EIVASSDSSISSKARGSNKVKIQPVAKYDWEQK 131
Query: 147 LLIGRQIAVNKHYVCYGLKGGN-----VRVLNLNTATRSLLRGHT 186
G IAV+ ++ Y ++ N VRV++++T+ R+LL+G T
Sbjct: 132 YYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFT 176
Score = 99 (39.9 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 46/187 (24%), Positives = 74/187 (39%)
Query: 153 IAVNKHYVCYGLKGGNVRVLNLNTATRSLLRGHTKI-KIWEDSKVAPLII--LKPHGGQP 209
I V H C L G + AT S G+ K +I+ + + P + KPH G+P
Sbjct: 291 IVVKGHSTC--LSEGALSPDGTVLATASH-DGYVKFWQIYIEGQDEPRCLHEWKPHDGRP 347
Query: 210 VNSAQYLTA-----PNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLD 264
++ + P+ L+T NRE+K+W + S W C QT+
Sbjct: 348 LSCLLFCDNHKKQDPDVPFWRFLITGADQNRELKMWCTVS------------WTCLQTIR 395
Query: 265 LKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTV 324
V +V + A L+ ++ ++ +Y + L I+EF +
Sbjct: 396 FSPDIFSSVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQEEGHACFSSISEFLL 455
Query: 325 TMPVLSF 331
T PVLSF
Sbjct: 456 THPVLSF 462
Score = 62 (26.9 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 49/219 (22%), Positives = 78/219 (35%)
Query: 333 GTIDPPSEHIIKLYCVQTQAIQQYSLNLFQCLPPPAESGGLERPDSSVSNDANGSRLSEF 392
G ++ + +IKL+CV T+A+Q + L P + P + D F
Sbjct: 496 GAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVA---PLPTHTAHED--------F 544
Query: 393 LFPSSTSKPSF-SETTGAVRY---PQLSTSHEATTSQENLTSKTESQPLSLARTTSDTNV 448
F S+P SE G+ + P L E + L+ +E++P + T D +
Sbjct: 545 TF--GESRPELGSEGLGSAAHGSQPDLRRIVELPAPADFLSLSSETKPKLM---TPDAFM 599
Query: 449 VCVAXXXXXXXXXXXRKHSGSINPPNSSELGSLLNEPGGSQPIIDSSFDGKTDTTQVLSH 508
A SGS + +SS S +D S T + L+
Sbjct: 600 TPSASLQQITASPSSSS-SGSSSSSSSSSSSLTAVSAMSSTSAVDPSL---TRPPEELTL 655
Query: 509 VPSLDSDANNDKINIAPNDIS-RALNPSMFKHPTHLITP 546
P L D + + S R L P + P +TP
Sbjct: 656 SPKLQLDGSLTMSSSGSLQASPRGLLPGLLPAPADKLTP 694
Score = 40 (19.1 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 366 PPAESGGLERPDSSVSNDANGSRLSEFLFPSSTSKPSFSETTGAVRYPQLS 416
P AES RP S+ + D NG + + P + + + TG P ++
Sbjct: 29 PSAES---PRPSSAYNGDLNGLLVPD---PLCSGDSTSANKTGLRTMPPIN 73
Score = 37 (18.1 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 619 TDPRIGMAAK---C-AGTSAETCVAEEAQEVD 646
T P I + K C +G + TC+ A+EV+
Sbjct: 68 TMPPINLQEKQVICLSGDDSSTCIGILAKEVE 99
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 147 (56.8 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 123/714 (17%), Positives = 278/714 (38%)
Query: 363 CLPPPAESGGLERPDSSVSNDANGSRLSEFLFPSSTSKPSFSETTGAVRYPQLSTSHEAT 422
C P + G + D D + L + SS+S S S T + +S+S E
Sbjct: 61 CYPQCFDHRGQPKKDKCCF-DKHNKVLYPYPCTSSSSSSSSSSTVSSSSSEVISSSSEEA 119
Query: 423 TSQENLTSKTESQPLSLARTTSDT-NVVCVAXXXXXXXXXXXRKHSGSINPPNSSELGSL 481
+S E +TS +E S ++S+ + + + S S +SSE+ S
Sbjct: 120 SSSE-ITSSSEISSSSEVSSSSEVLSSSEIISSSSEVVSSSSKVSSSSEATSSSSEIISS 178
Query: 482 LNEPGGSQPIIDSSFDGKTDTTQVLSHVPSLDSDANNDKINIAPNDISRALNPSMFKHPT 541
+E S + SS + + +++V+S + S + + + S + S +
Sbjct: 179 SSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSS 238
Query: 542 HLITPSEILMSAS--SSETTNIIGGKNEEEVVVNSDAGNAEVEVKVLDETRFTHDEFGSR 599
+ + SEI+ S+S SS ++ ++ +E V +S+ ++ EV E + E S
Sbjct: 239 QVTSSSEIVSSSSEVSSSSSEVVSSSSE--VSSSSEVVSSSSEVSSSSEVS-SSSEVSSS 295
Query: 600 GE--SQNLVSENREKYLRYQATDPRIGMAAKCAGTSAETCVAEEAQEVDGAGIMETLAQP 657
E S + VS + + + + + + S+ + V+ ++ V + E +
Sbjct: 296 SEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVVSSSS--EVSSSS 353
Query: 658 PCNDEAEVEDSTQDLDGGVSDSTMTTTFAQTGXXXXXXXXXXXXXXXXXXXCSPSSTVLN 717
+ +EV S+Q S S + ++ ++ S SS V +
Sbjct: 354 EVSSSSEVSSSSQV----TSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSS 409
Query: 718 LANLSNEXXXXXXXXXXXXXFSQVIAMQDMLNQLMTMQKELQKQMSNLVTLPVTKEGRRL 777
+ +S+ S+V + +++ + + S+ V ++
Sbjct: 410 SSEVSSSSEVSSSSEVSSS--SEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSS 467
Query: 778 EASLGRGIEKAVKA-STDALWARFHEENARNEKLLRDRTQQITGLITNLINKDLTASLEK 836
E S + + + S+ + + E ++ + +++ ++ + + ++++S E
Sbjct: 468 EVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEV 527
Query: 837 LVKKELAAVGPAIVRT--ISPSIEKTITSAIVESFQRGVGDKA-VNQLERSVNSRLEATV 893
E+++ I + +S S E + +S+ V S V + V V+S E +
Sbjct: 528 SSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSS 587
Query: 894 GRQIQAQFQT-SGKHALQ---DALKSSVEASVIPAFEKSCK-AMFEQVDATFQKGMVEHT 948
++ + Q S + + + SS E S S + + +V ++ +
Sbjct: 588 SSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQV 647
Query: 949 TATLQHFESTHSPLALVLRESVNSVSSMAQTLSGEFVDGQRKLFDLAGVRNNTSAFNPSV 1008
T++ + S+ S ++ E V+S S ++ S E V ++ + V +++ + S
Sbjct: 648 TSSSE-IVSSSSEVSSSSSEVVSSSSEVSS--SSEVVSSSSEVSSSSEVSSSSEVSSSSQ 704
Query: 1009 PLSNGPLLGLHEKVEATMDPTKELSRLVSDRKYEEAFTTALQRSDVSIVSWLCS 1062
+S+ ++ +V ++ S + S + + + S+VS S + S
Sbjct: 705 VISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVS-SSSEVSSSSEVTS 757
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 147 (56.8 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 123/714 (17%), Positives = 278/714 (38%)
Query: 363 CLPPPAESGGLERPDSSVSNDANGSRLSEFLFPSSTSKPSFSETTGAVRYPQLSTSHEAT 422
C P + G + D D + L + SS+S S S T + +S+S E
Sbjct: 61 CYPQCFDHRGQPKKDKCCF-DKHNKVLYPYPCTSSSSSSSSSSTVSSSSSEVISSSSEEA 119
Query: 423 TSQENLTSKTESQPLSLARTTSDT-NVVCVAXXXXXXXXXXXRKHSGSINPPNSSELGSL 481
+S E +TS +E S ++S+ + + + S S +SSE+ S
Sbjct: 120 SSSE-ITSSSEISSSSEVSSSSEVLSSSEIISSSSEVVSSSSKVSSSSEATSSSSEIISS 178
Query: 482 LNEPGGSQPIIDSSFDGKTDTTQVLSHVPSLDSDANNDKINIAPNDISRALNPSMFKHPT 541
+E S + SS + + +++V+S + S + + + S + S +
Sbjct: 179 SSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSS 238
Query: 542 HLITPSEILMSAS--SSETTNIIGGKNEEEVVVNSDAGNAEVEVKVLDETRFTHDEFGSR 599
+ + SEI+ S+S SS ++ ++ +E V +S+ ++ EV E + E S
Sbjct: 239 QVTSSSEIVSSSSEVSSSSSEVVSSSSE--VSSSSEVVSSSSEVSSSSEVS-SSSEVSSS 295
Query: 600 GE--SQNLVSENREKYLRYQATDPRIGMAAKCAGTSAETCVAEEAQEVDGAGIMETLAQP 657
E S + VS + + + + + + S+ + V+ ++ V + E +
Sbjct: 296 SEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVVSSSS--EVSSSS 353
Query: 658 PCNDEAEVEDSTQDLDGGVSDSTMTTTFAQTGXXXXXXXXXXXXXXXXXXXCSPSSTVLN 717
+ +EV S+Q S S + ++ ++ S SS V +
Sbjct: 354 EVSSSSEVSSSSQV----TSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSS 409
Query: 718 LANLSNEXXXXXXXXXXXXXFSQVIAMQDMLNQLMTMQKELQKQMSNLVTLPVTKEGRRL 777
+ +S+ S+V + +++ + + S+ V ++
Sbjct: 410 SSEVSSSSEVSSSSEVSSS--SEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSS 467
Query: 778 EASLGRGIEKAVKA-STDALWARFHEENARNEKLLRDRTQQITGLITNLINKDLTASLEK 836
E S + + + S+ + + E ++ + +++ ++ + + ++++S E
Sbjct: 468 EVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEV 527
Query: 837 LVKKELAAVGPAIVRT--ISPSIEKTITSAIVESFQRGVGDKA-VNQLERSVNSRLEATV 893
E+++ I + +S S E + +S+ V S V + V V+S E +
Sbjct: 528 SSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSS 587
Query: 894 GRQIQAQFQT-SGKHALQ---DALKSSVEASVIPAFEKSCK-AMFEQVDATFQKGMVEHT 948
++ + Q S + + + SS E S S + + +V ++ +
Sbjct: 588 SSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQV 647
Query: 949 TATLQHFESTHSPLALVLRESVNSVSSMAQTLSGEFVDGQRKLFDLAGVRNNTSAFNPSV 1008
T++ + S+ S ++ E V+S S ++ S E V ++ + V +++ + S
Sbjct: 648 TSSSE-IVSSSSEVSSSSSEVVSSSSEVSS--SSEVVSSSSEVSSSSEVSSSSEVSSSSQ 704
Query: 1009 PLSNGPLLGLHEKVEATMDPTKELSRLVSDRKYEEAFTTALQRSDVSIVSWLCS 1062
+S+ ++ +V ++ S + S + + + S+VS S + S
Sbjct: 705 VISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVS-SSSEVSSSSEVTS 757
>FB|FBgn0032340 [details] [associations]
symbol:Ge-1 species:7227 "Drosophila melanogaster"
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IDA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045451 "pole plasm oskar mRNA localization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0000932
GO:GO:0006402 GO:GO:0033962 GO:GO:0045451 eggNOG:NOG270061
KO:K12616 EMBL:BT004479 EMBL:AY113369 RefSeq:NP_609486.2
RefSeq:NP_723654.1 UniGene:Dm.12439 PDB:2VXG PDBsum:2VXG
ProteinModelPortal:Q9VKK1 SMR:Q9VKK1 IntAct:Q9VKK1 MINT:MINT-965853
STRING:Q9VKK1 PaxDb:Q9VKK1 EnsemblMetazoa:FBtr0080231
EnsemblMetazoa:FBtr0080232 GeneID:34541 KEGG:dme:Dmel_CG6181
UCSC:CG6181-RA CTD:34541 FlyBase:FBgn0032340
GeneTree:ENSGT00510000047791 InParanoid:Q9VKK1 OMA:ESPRNGL
OrthoDB:EOG4N02VW PhylomeDB:Q9VKK1 EvolutionaryTrace:Q9VKK1
GenomeRNAi:34541 NextBio:788972 Bgee:Q9VKK1 Uniprot:Q9VKK1
Length = 1354
Score = 111 (44.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 155/847 (18%), Positives = 306/847 (36%)
Query: 342 IIKLYCVQTQAIQQYSLNLFQCLPPPAESGGLERPDSSVSNDANGSRLSEFLFPSSTSKP 401
II CV + ++ SLN + P E P+S S +L + LF S +
Sbjct: 541 IIYQPCV-AEKTERSSLNSKRSQTPEDNLLIKEEPESPNSGTVGAVQL-DALFAKSAKRA 598
Query: 402 SFSETTGAVRYPQLSTSHEATTSQENL--TSKTESQPLSLARTTSDTNVVCVAXXXXXXX 459
S ++ V + + + Q+ +K+ES LS A T N++
Sbjct: 599 STGSSSAMVAVAAAAAAAPSAILQDATKEAAKSESPQLSSAYT-QQVNLMTPDAFSASGT 657
Query: 460 XXXXRKHSGSINPPNSSELGSLLNEPGGSQPIIDSSFDGKT-DTTQVLSHVPSLDSDANN 518
++ ++ +G+ + Q D S D T ++L+ V S S+ N
Sbjct: 658 AAAAAVF---VSTSTTTSIGTDSSTTTSGQ---DRSIDSAVLQTIRMLATVTSKTSENPN 711
Query: 519 DKINIAPNDISRALNPSMFKHPTHLITPSEILMSASSSETTNIIGGKNEEEVVVNSDAGN 578
++ + +N ++ + + L + I +N E V + A
Sbjct: 712 AEV------LLNLMNNTLIED-----REQQKLKEKLDARKKFIAIDRNPERNVAENLASG 760
Query: 579 AEVEVKVLDETRFTHDEFGS-RGESQNLVSENREKYLRYQATDPRIGMAAKCAGTSAETC 637
+ + + E T D+ + E +NL ++ ++ + P + GT
Sbjct: 761 SSSPSREVQEIMATQDDADAYEAELENLDDDDDDEEEELANSSP---LPEAVDGTWPIVK 817
Query: 638 VAEEAQEVDGAG-IMETLAQPPCNDEAEVEDSTQDLDGGVSDSTMTTTFAQTGXXXXXXX 696
++ + E+ A IM Q N L GG +++T + +
Sbjct: 818 LSSHSAELQNAAQIMSQAVQNTNNGNVP-----PTLGGGHNNNTSVGSNSNNNTATTLST 872
Query: 697 XXXXXXXXXXXXCSPSSTVLNLANLSNEXXXXXXXXXXXXX------FSQVIAMQDMLNQ 750
C SS L N E +++ Q+
Sbjct: 873 SNTSSSNNAGGTCVDSSGTGEL-NAKMELLIDLVKAQSKQINKLENEVNKLQKQQEAAAA 931
Query: 751 LMTMQK-ELQ-KQMSNLVTLPVTKEGRRLEASLGRGIEKAVKASTDALWARFHEENARNE 808
L + Q L+ K +S L + + +E L R + K T+ L AR + +
Sbjct: 932 LHSKQDTSLEPKNLSQLAYKIEMQLSKLMEQYLKRYENEHKKKLTEFLAARESQNRELRD 991
Query: 809 KLLRDRTQQITGLITNLINKDLTASLEKLVKKELAAVGPAIVRTISPSIEKTITSAIVES 868
+L+ Q + T++I L L++ + L V A + + ++ I +
Sbjct: 992 SVLQVLNQYVMNHFTDIIGNVLNMELQRQL---LPRVN-ANMDQLQAQMQVEIVQKL-SV 1046
Query: 869 FQRGVGDKAVNQLERSVNSRLEATVGRQIQAQFQTSGKHALQDALKSSVEASVIPAFEKS 928
F + V + + Q+ +S L+ T G+ + QTS + A +++ S++ + + +
Sbjct: 1047 FDKTVKEN-IAQVCKS-KQFLD-TFGKSVLIGVQTSLQTAFIESMSSTLIPAYEKSSQNM 1103
Query: 929 CKAMFEQVDATFQKGMVEHTTATLQHF----------ESTHSPLALVLRESVNSVSSMAQ 978
K + + + MV+ T LQH E ++ L++ L++ V S +
Sbjct: 1104 FKQLHDAFSVGIKDFMVQFNTY-LQHMPQPQAGSGNTEEINNKLSM-LKQLVESSLHKHR 1161
Query: 979 T-LSGEFVDGQRKLFDLA-----GVRNNTSA-FNPSVPLSNGPLLGLHEKVEATMDPTKE 1031
T L+ ++ QR++ L V+ A + N + D
Sbjct: 1162 TELTDAMLETQREVKSLEILLARQVQETIRAELRKHMEAQNVAMRSQAATPAPPYDLRDS 1221
Query: 1032 LSRLVSDRKYEEAFTTALQRSDVSIVSWLCSQVDMHGLLSMXXXXXXXXXXXXXXXXXAC 1091
+ +L+ + +AF AL +D+ +V + D + + +
Sbjct: 1222 IKQLLMAGQINKAFHQALLANDLGLVEFTLRHTDSNQAFAPEGCRLEQKVLLSLIQQISA 1281
Query: 1092 DINKDTARKLAWLTDVAAAINPADPMIAVHARPIFEQVYQRLHHQ-RSSPTISGAELSSI 1150
D+ K +L + AIN ADP+ HA + ++Y+ ++SP ++ S++
Sbjct: 1282 DMTNHNELKQRYLNEALLAINMADPITREHAPKVLTELYRNCQQFIKNSP--KNSQFSNV 1339
Query: 1151 RLLIHVI 1157
RLL+ I
Sbjct: 1340 RLLMKAI 1346
Score = 69 (29.3 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 39/151 (25%), Positives = 62/151 (41%)
Query: 203 KPHGGQPVNSAQYLTAPNQA------GHIILVTAGPLNREVKLWASASEEGWSLPTHAES 256
KPH G+ V S +L N+ H+I T N E+KLW +
Sbjct: 355 KPHDGKKVCSLFFLDNINKPVEESYWQHVI--TTSDANTEIKLW------------NCSL 400
Query: 257 WKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY-G-----NN 310
WKC QT+++ +S F + A L+ + A+Y + +G G N
Sbjct: 401 WKCLQTINVVASPSSLQPRNFIAGID--RSANYLVLSCLDSLAVYVMQIGSTGGADSENR 458
Query: 311 SA---------ATRIDYIAEFTVTMPVLSFT 332
S+ + RI +AEF ++ +LSF+
Sbjct: 459 SSDSEGEGCDTSKRIQNVAEFKLSSGILSFS 489
Score = 53 (23.7 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 154 AVNKHYVCYGLKGGNVRVLNLNTATRSLLRG 184
A+N + G++G VRV N+ T+ R+L++G
Sbjct: 156 AINVNNKATGMEG-MVRVCNIATSMRALIKG 185
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.128 0.360 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1165 1051 0.00083 123 3 11 23 0.45 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 623 (66 KB)
Total size of DFA: 436 KB (2209 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 99.24u 0.12s 99.36t Elapsed: 00:00:06
Total cpu time: 99.25u 0.12s 99.37t Elapsed: 00:00:06
Start: Fri May 10 03:56:18 2013 End: Fri May 10 03:56:24 2013