BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001070
(1165 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LTT8|VCS_ARATH Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana GN=VCS
PE=1 SV=1
Length = 1344
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/1000 (53%), Positives = 667/1000 (66%), Gaps = 58/1000 (5%)
Query: 188 IKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEG 247
IKIW+D K PL++L+PH G PV+SA ++T+P + HIIL+T GPLNRE+K+W SA EEG
Sbjct: 381 IKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMKIWVSAGEEG 440
Query: 248 WSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307
W LP AESW+CTQTLDLKSS +PR EEAFFNQV+ LS+AGLLL ANAK+NA+Y+VHL Y
Sbjct: 441 WLLPADAESWRCTQTLDLKSSTEPRAEEAFFNQVIALSEAGLLLLANAKRNALYAVHLDY 500
Query: 308 GNNSAATRIDYIAEFTVTMPVLSFTGTIDPPSEHIIKLYCVQTQAIQQYSLNLFQCLPPP 367
G++ TR+DY++EFTVTMP+LSF GT DPP E I+K+YCVQT AIQQY+L+L CLPPP
Sbjct: 501 GSSPVGTRMDYLSEFTVTMPILSFIGTNDPPEEPIVKVYCVQTLAIQQYTLDLCLCLPPP 560
Query: 368 AESGGLERPDSSVSNDAN---------GSRLSEFLFPSSTSKPSF----SETTGAVRYPQ 414
E+ GLE+ DSSVS +AN G + ++ S KPS SE+ + +P
Sbjct: 561 IENMGLEKSDSSVSREANLVEGMSEPSGLKPTDLPSVDSVPKPSIIVNRSESANKLSFP- 619
Query: 415 LSTSHEATTSQENLTSKTESQPLSLARTTSDTNVVCVASPPLPLSPSFSRKHSGSINPPN 474
S EAT SQ + E + L TS P LPLSP S K SG P
Sbjct: 620 ---SAEAT-SQAIVPPNGEPKTSGLPSQTSGAGSAYATLPQLPLSPRLSSKLSGYHTPVE 675
Query: 475 SSELGSLLNEPGGSQPIIDSSFDGKTDTTQVLS-HVPSLDSDANNDKINIAPND-ISRAL 532
+ E +E GG P D S D + D + V S++ + + N+ P+D +S
Sbjct: 676 AIEPVIPHHELGGKTPSADYSVDRQMDAVGERNLDVSSVEEISRSKDSNVTPDDDVSGMR 735
Query: 533 NPS-MFKHPTHLITPSEILMSASSSETTNIIGGKNEEEV---VVNSDAGNAEVEVKVLDE 588
+PS FKHPTHL+TPSEILM SS+E + + + + VN+D + EVEVK + E
Sbjct: 736 SPSAFFKHPTHLVTPSEILMGVSSAEASITTEDRRDRDANIQDVNNDPRDTEVEVKEISE 795
Query: 589 TRFTHD-EFGSRGESQNLVSENREKYLRYQATDPRIGMAAKCAGTSAETCVAEEAQEVDG 647
R T + E E++N SENREK Q ++ MA C ++ T + E++
Sbjct: 796 ARSTQNGEINDHDETENCTSENREKVFCSQVSNLSTEMARDCYPSTEGTFIPGESK---- 851
Query: 648 AGIMETLAQP-PCNDEAEVEDSTQDLDGGVSDSTMTTTFAQTGASSAKGKKQKEKKYQAS 706
QP DE+ V D GG A KGKKQK K Q
Sbjct: 852 -----AYGQPIKAGDESGV-----DSRGG-------------PAKLLKGKKQKAKNSQGP 888
Query: 707 SQCSPSSTVLNLANLSNEPAGSSSLPSAPAAFSQVIAMQDMLNQLMTMQKELQKQMSNLV 766
S SS V NLA+ NE + S S P Q++AMQ+ +NQ+M QKE+Q+Q+SN
Sbjct: 889 GLSSTSSNVANLADSFNEQSQSLSHPMT-DLLPQLLAMQETMNQVMASQKEMQRQLSNAA 947
Query: 767 TLPVTKEGRRLEASLGRGIEKAVKASTDALWARFHEENARNEKLLRDRTQQITGLITNLI 826
T P+ KE +RLE +LGR IEK+ K++ DALWAR EE +NEK LRD QQI TN +
Sbjct: 948 TGPIGKESKRLEVALGRMIEKSSKSNADALWARIQEETVKNEKALRDHAQQIVNATTNFM 1007
Query: 827 NKDLTASLEKLVKKELAAVGPAIVRTISPSIEKTITSAIVESFQRGVGDKAVNQLERSVN 886
+K+L A EK +KKELAA+GPA+ R++ P IEKT++SAI ESFQRG+GDKAVNQL++SVN
Sbjct: 1008 SKELNAMFEKTIKKELAAIGPALARSVVPVIEKTVSSAITESFQRGIGDKAVNQLDKSVN 1067
Query: 887 SRLEATVGRQIQAQFQTSGKHALQDALKSSVEASVIPAFEKSCKAMFEQVDATFQKGMVE 946
+LEATV RQIQAQFQTSGK ALQ+ L+SSVE+SVIP+FEK+CKAMF+Q+D+ FQKG+ E
Sbjct: 1068 IKLEATVARQIQAQFQTSGKQALQEGLRSSVESSVIPSFEKACKAMFDQIDSAFQKGIAE 1127
Query: 947 HTTATLQHFESTHSPLALVLRESVNSVSSMAQTLSGEFVDGQRKLFDLAGVRNNTSAFNP 1006
HT A Q F+S HS LA L+ES+ S SS+AQ LS E + QR L LA N+ N
Sbjct: 1128 HTNAAQQRFDSGHSQLAHTLKESITSASSVAQALSRELAETQRNLLALAAAGANSGGSNS 1187
Query: 1007 SVP-LSNGPLLGLHEKVEATMDPTKELSRLVSDRKYEEAFTTALQRSDVSIVSWLCSQVD 1065
V LS GPL L EKVEA MDPT ELSRL+S+RKYEE+FT+ALQRSDVSIVSWLCSQVD
Sbjct: 1188 LVTQLSGGPLGALLEKVEAPMDPTTELSRLISERKYEESFTSALQRSDVSIVSWLCSQVD 1247
Query: 1066 MHGLLSMVPLPLSQGVLLSLLQQLACDINKDTARKLAWLTDVAAAINPADPMIAVHARPI 1125
+ GLL+M PLPLSQGVLLSLLQQLACDI+KDT+RKLAW+TDV AAINP+D MIAVHARPI
Sbjct: 1248 LRGLLAMNPLPLSQGVLLSLLQQLACDISKDTSRKLAWMTDVVAAINPSDQMIAVHARPI 1307
Query: 1126 FEQVYQRLHHQRSSPTISGAELSSIRLLIHVINSMLMTFK 1165
FEQVYQ LHH R++P G+++S+IRL++HVINSMLM K
Sbjct: 1308 FEQVYQILHHHRNAP---GSDVSAIRLIMHVINSMLMGCK 1344
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 89/158 (56%), Gaps = 37/158 (23%)
Query: 65 PHRLLPYTPLPTTTVVSP----NAGPQILALLNNNKS----------------------- 97
P R L Y P P + SP N G ILALLNN +
Sbjct: 83 PQRTLSY-PTPPLNLQSPRSNHNPGTHILALLNNTNNGAPVANQEPSHQLPVVNHNEIAR 141
Query: 98 KHVGSTAPIY--------GKRVFGDYVAYDVDAVEEGREPTQQLEVNPITKYGSDPELLI 149
G + PI G+R+ G++ YDVD +G E QLEV PITKYGSDP+L++
Sbjct: 142 SFPGGSGPIRVPSCKLPKGRRLIGEHAVYDVDVRLQG-EIQPQLEVTPITKYGSDPQLVV 200
Query: 150 GRQIAVNKHYVCYGLKGGNVRVLNLNTATRSLLRGHTK 187
GRQIAVNK Y+CYGLKGGN+RVLN+NTA RSL RGH++
Sbjct: 201 GRQIAVNKVYICYGLKGGNIRVLNINTALRSLFRGHSQ 238
>sp|Q9LTT9|VCR_ARATH Varicose-related protein OS=Arabidopsis thaliana GN=VCR PE=2 SV=1
Length = 1340
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/1002 (49%), Positives = 660/1002 (65%), Gaps = 50/1002 (4%)
Query: 188 IKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEG 247
+KIW+D K PL++L+PH G PVNSA ++T+P + HIIL+T GPLNRE+K+W SA EEG
Sbjct: 365 VKIWQDRKTQPLVVLRPHDGLPVNSAIFVTSPERPDHIILITGGPLNREIKIWVSAGEEG 424
Query: 248 WSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307
W LP ESW+CTQTLDLKSS +P+ E+AFFNQV+ LS+AGLLL ANA++NAIYSVHL Y
Sbjct: 425 WLLPADTESWRCTQTLDLKSSTEPQAEKAFFNQVIALSEAGLLLLANARRNAIYSVHLDY 484
Query: 308 GNNSAATRIDYIAEFTVTMPVLSFTGTIDPPSEHIIKLYCVQTQAIQQYSLNLFQCLPPP 367
G++ T +DY++EFTVTMP+LSF GT D P E +K+YCVQT AIQQY+L+LF C+PPP
Sbjct: 485 GSSPVETLMDYLSEFTVTMPILSFIGTNDHPEEPFVKVYCVQTLAIQQYTLDLFLCMPPP 544
Query: 368 AESGGLERPDSSVSNDANGSRLSEFLFPSSTSKPSFSETTGAVRYPQLSTSHEATTSQEN 427
E+ G E+ DS+VS +AN L E +S KP+ + G+V P + + + +
Sbjct: 545 RENVGFEKSDSTVSREAN---LVESTLETSGMKPTELPSVGSVPKPSILVNRSENANMLS 601
Query: 428 LTSKTESQPLS---------------LARTTSDTNVVCVASPPLPLSPSFSRKHSGSINP 472
+ S ++ + TSD + SP LPLSP S K SG P
Sbjct: 602 FPAGPASAGITPPAIVPPNGEPKTSGMPSETSDVDSAYAPSPQLPLSPRLSSKLSGYHTP 661
Query: 473 PNSSELGSLLNEPGGSQPIIDSSFDGKTDTTQVLS-HVPSLDSDANNDKINIAPND-ISR 530
+ E ++ GG D + +TD + V S++ + + N+ P+D +S
Sbjct: 662 VEAFEQVLPHHKLGGKTSSADYFYVRQTDDVGGRNLDVSSVEENCRSKDTNVTPDDDVSG 721
Query: 531 ALNPS-MFKHPTHLITPSEILMSASSSETTNIIGGKNEEEV---VVNSDAGNAEVEVKVL 586
+PS FK PTHL+TPSEILM SS+E + K + + VN+DA EVE+K +
Sbjct: 722 IRSPSAFFKQPTHLVTPSEILMGVSSTEASITTEDKRDRDANIEEVNNDARGLEVELKEV 781
Query: 587 DETRFTHD-EFGSRGESQNLVSENREKYLRYQATDPRIGMAAKCAGTSAETCVAEEAQEV 645
E + + + E ++N SE+RE QA++ MA + + + ++
Sbjct: 782 GEAQTSQNGEINYHETTENHTSESRENIFCSQASNLSTEMARDRHPITEGSAIPGDSM-- 839
Query: 646 DGAGIMETLAQP-PCNDEAEVEDSTQDLDGGVSDSTMTTTFAQTGASSAKGKKQKEKKYQ 704
QP DE ++ ++D+ + +S ++ A+++KGKKQK K Q
Sbjct: 840 -------AYGQPLQAGDERGLD--SRDVSAKLPESGSSSGLV---ATNSKGKKQKAKNSQ 887
Query: 705 ASSQCSPSSTVLNLANLSNEPAGSSSLPSAPAAFSQVIAMQDMLNQLMTMQKELQKQMSN 764
S SS V NLA+ NE + S + P A Q++A+Q+ + Q+M QKE+Q+Q+SN
Sbjct: 888 GPGLSSTSSNVANLADSFNEQSQSLNHPMA-DLLPQLLALQETMTQVMASQKEMQRQLSN 946
Query: 765 LVTLPVTKEGRRLEASLGRGIEKAVKASTDALWARFHEENARNEKLLRDRTQQITGLITN 824
VT P+ KEG++LE +LGR IEK+ K++ DALWA F EE +NEK LRD QQI TN
Sbjct: 947 AVTGPIVKEGKKLEVALGRMIEKSSKSNADALWAHFQEEAVKNEKALRDHGQQIMNETTN 1006
Query: 825 LINKDLTASLEKLVKKELAAVGPAIVRTISPSIEKTITSAIVESFQRGVGDKAVNQLERS 884
+K+L A EK +KKE A+VGP + R ++P IEKT++SAI ESFQRG+GDKAVNQLE+S
Sbjct: 1007 FTSKELNAMFEKTMKKEFASVGPTLARVVTPVIEKTVSSAITESFQRGIGDKAVNQLEKS 1066
Query: 885 VNSRLEATVGRQIQAQFQTSGKHALQDALKSSVEASVIPAFEKSCKAMFEQVDATFQKGM 944
VNS+LE TV RQIQAQFQTSG+ LQ+ L+SS+E+SVIP+FE+SCK MFEQVD+T QKG+
Sbjct: 1067 VNSKLETTVARQIQAQFQTSGRQVLQEGLRSSMESSVIPSFERSCKTMFEQVDSTLQKGI 1126
Query: 945 VEHTTATLQHFESTHSPLALVLRESVNSVSSMAQTLSGEFVDGQRKLFDLAGVRNNTSAF 1004
+HT+AT Q +S S LA LRE+++S SS+ Q L+ E + QR L +
Sbjct: 1127 GKHTSATQQRIDSGQSQLAHTLRETISSASSVTQALNRELAESQRNRLALTA-----AGS 1181
Query: 1005 NPSVP-LSNGPLLGLHEKVEATMDPTKELSRLVSDRKYEEAFTTALQRSDVSIVSWLCSQ 1063
NP V LSNGPL L EKVEA MDPT ELSRL+S+RKYEE+FT+ALQRSDVSIVSWLCSQ
Sbjct: 1182 NPLVTQLSNGPLGALLEKVEAPMDPTTELSRLISERKYEESFTSALQRSDVSIVSWLCSQ 1241
Query: 1064 VDMHGLLSMVPLPLSQGVLLSLLQQLACDINKDTARKLAWLTDVAAAINPADPMIAVHAR 1123
VD+ GLL+M PLPLSQGVLLSLLQQLACDI+ DT+RKL W+TDV AINP+D MIAVHAR
Sbjct: 1242 VDLRGLLAMNPLPLSQGVLLSLLQQLACDISTDTSRKLGWMTDVVTAINPSDQMIAVHAR 1301
Query: 1124 PIFEQVYQRLHHQRSSPTISGAELSSIRLLIHVINSMLMTFK 1165
PIFEQVYQ LHH R++P G+++S++RL++HVINS+LM+ K
Sbjct: 1302 PIFEQVYQILHHHRNAP---GSDVSAVRLIMHVINSLLMSCK 1340
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 109/208 (52%), Gaps = 38/208 (18%)
Query: 17 FDMRNWFPP----YPPPSSSAAGDNFFP--YPPPPPPPPPEPHANMHPHPYPHG------ 64
FD+ F P YPPP+ + + Y PP P P
Sbjct: 16 FDLGTIFKPSSNPYPPPTGPFLNNQYNQQLYAPPGIAAQPSPVNQTQQDVSSSSSATNLQ 75
Query: 65 PHRLLPYT--PL-PTTTVVSPNAGPQILALLNNNK-------SKHV-------GSTAPIY 107
P R L Y PL P + V+ N G ILALLNN S H G + PI+
Sbjct: 76 PQRTLSYPTPPLNPQSPRVNHNPGTHILALLNNGGAVANQEPSHHNEIARAFPGGSGPIH 135
Query: 108 --------GKRVFGDYVAYDVDAVEEGREPTQQLEVNPITKYGSDPELLIGRQIAVNKHY 159
G+R+ G++ YDVD +G E QLEV PITKYGSDP+L++GRQIAVNK Y
Sbjct: 136 VPSGKMPKGRRLVGEHAVYDVDVRLQG-EIQPQLEVTPITKYGSDPQLVLGRQIAVNKVY 194
Query: 160 VCYGLKGGNVRVLNLNTATRSLLRGHTK 187
+CYGLKGG++RVLN+NTA RSL RGH++
Sbjct: 195 ICYGLKGGSIRVLNINTALRSLFRGHSQ 222
>sp|Q7ZXT3|EDC4_XENLA Enhancer of mRNA-decapping protein 4 OS=Xenopus laevis GN=edc4 PE=2
SV=1
Length = 1391
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 204/457 (44%), Gaps = 61/457 (13%)
Query: 745 QDMLNQLMTMQKELQKQMSNLVTL--PVTKEGRRLEASLGRGIEKAVKASTDALWARFHE 802
+++L L + QKEL N + L +T +++S+ +E+ + + +
Sbjct: 938 EELLCMLRSQQKELSDLRQNQLELMKKLTDHMDAVQSSIMGHVERVIDTQQE-------Q 990
Query: 803 ENARNEKLLRD---RTQQITGLITNLINKDLTAS----LEKLVKKELA-AVGPAIVRTIS 854
E R E++L D R Q+ ++ ++ L+ S ++K++++E+ V I +T+
Sbjct: 991 EQRRVERILSDGHERNGQLQEYLSQQLSHSLSGSLSNRVDKIIREEMKKTVSQCISKTLD 1050
Query: 855 PSIEKTITSAIVESFQ--RGVGDKAVNQLERSVNSRLEATVGRQIQAQFQTSGKHALQDA 912
P + +TS++ GV + V ++ +S N + +GR QT + A
Sbjct: 1051 P-VAAQLTSSVAAKVTAVEGVLKENVTKMVKSKN--VTDAIGRVAADSLQT----VIHSA 1103
Query: 913 LKSSVEASVIPAFEKSCKAMFEQVDATFQKGMVEHTTATLQHFES-------THSPLALV 965
+ + ++ V+PAFE+SC++MF+QV+ +F++G ++ H S T P+
Sbjct: 1104 YREAFQSIVLPAFERSCQSMFQQVNNSFKQGTQDYMQQLEAHLRSIKMNEQETRDPVVTQ 1163
Query: 966 LRESVNSVSSMAQTLSGEFVDG-----QRKLFDLAG-------------VRNNTS-AFNP 1006
L++ V+S+ ++ L+ Q +L G ++ S A
Sbjct: 1164 LQQMVDSLQTVTDQLASNITSNVRSEVQHQLHIAVGNMQDSILSQVQRIIKEEVSHAMKE 1223
Query: 1007 SVPLSNGPLLGLHEKVEATMDPTKELS---------RLVSDRKYEEAFTTALQRSDVSIV 1057
++ T P+ + +L+ + +AF AL SD++++
Sbjct: 1224 QQAAVTSSIMQAMRSAAGTPIPSSHMDFHSQQTHILQLMQQGQINQAFQQALTASDLNLI 1283
Query: 1058 SWLCSQVDMHGLLSMVPLPLSQGVLLSLLQQLACDINKDTARKLAWLTDVAAAINPADPM 1117
++C VD + P PL+Q VLLSL+QQL+ D T KL +L + ++ +DP+
Sbjct: 1284 LYVCETVDPQQVFGQHPCPLTQPVLLSLIQQLSFDFGSRTEIKLNYLEEAVMNLDHSDPV 1343
Query: 1118 IAVHARPIFEQVYQRLHHQRSSPTISGAELSSIRLLI 1154
H + QV Q+L+ + + + + RLLI
Sbjct: 1344 TRDHMGTVLNQVRQKLYQFLQAEPQNALQKPARRLLI 1380
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 83 NAGPQILALLNNNKSKHVGSTAPIYGKRVFGDYVA-YDVDAVEEGREPTQQLEVNPITKY 141
N+ Q++ L ++ S S I GK V + VA +D + + R + ++++ P+ KY
Sbjct: 71 NSERQVICLSGDDSS----SCIKITGKDV--EIVASHDSNICSKAR-GSNKVKIQPVAKY 123
Query: 142 GSDPELLIGRQIAVNKHYVCYGLKGGN----VRVLNLNTATRSLLRGHT 186
+ + G IAV+ Y+ Y +G N VRVL+L TA R LL+G T
Sbjct: 124 DWEQKYYCGNLIAVSNDYIAYATRGANGSAMVRVLSLTTAERILLKGIT 172
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 72/198 (36%), Gaps = 60/198 (30%)
Query: 203 KPHGGQPVNSAQYLT-----APNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESW 257
KPH G+P++ + P L+T NRE+K+W + S W
Sbjct: 338 KPHNGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKVWCTVS------------W 385
Query: 258 KCTQTLDLK-----SSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSA 312
QT+ S P ++ + LS A L+ + ++ +Y + L +
Sbjct: 386 TSLQTIQFSPDPFSSGVLPGLKASLD-----LS-AEFLILTDVQRKVLYVMELNQNQDEG 439
Query: 313 ATRIDYIAEFTVTMPVLSF--------------------------------TGTIDPPSE 340
I+EF +T PVLSF +++ +
Sbjct: 440 KATFTSISEFLLTHPVLSFGIQDVNHCRLRNTEVLPAEEDNNSINQEEILECESVEAAAG 499
Query: 341 HIIKLYCVQTQAIQQYSL 358
+IKL+CV T+A+Q +
Sbjct: 500 VLIKLFCVHTKALQDVQI 517
>sp|Q6P2E9|EDC4_HUMAN Enhancer of mRNA-decapping protein 4 OS=Homo sapiens GN=EDC4 PE=1
SV=1
Length = 1401
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 180/405 (44%), Gaps = 71/405 (17%)
Query: 784 GIEKAVKASTD-ALWARFHEENARNEKLLRDRTQQITGLITNLINKDLTASLEKLVKKEL 842
G++ V + AL R +E R E+ L + QQ G + + + L+ +L
Sbjct: 981 GLQSTVTGHVERALETRHEQEQRRLERALAE-GQQRGGQLQEQLTQQLSQALS------- 1032
Query: 843 AAVGPAIVRTISPSIEKTITSAIVESFQRGVGDKAVNQLERSVNSRLEATVG-------R 895
+AV + R+I I+KT+ + S + G QL SV ++L A G +
Sbjct: 1033 SAVAGRLERSIRDEIKKTVPPCVSRSLEPMAG-----QLSNSVATKLTAVEGSMKENISK 1087
Query: 896 QIQAQFQTSG---------KHALQDALKSSVEASVIPAFEKSCKAMFEQVDATFQKGMVE 946
++++ T + +Q A + + ++ V+PAFEKSC+AMF+Q++ +F+ G E
Sbjct: 1088 LLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQE 1147
Query: 947 HTTATLQHFES-------THSPLALVLRESVNSVSS----MAQTLSGEF-VDGQRKLFDL 994
+ H +S P+ LR V+++ S MA T++G + Q +L
Sbjct: 1148 YLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVAGSVRAEVQHQLHVA 1207
Query: 995 AG---------------------VRNNTSAFNPSV-----PLSNGPLLGLHEKVEATMDP 1028
G ++ +A S+ + P+ H +A
Sbjct: 1208 VGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLDCQAQQ-- 1265
Query: 1029 TKELSRLVSDRKYEEAFTTALQRSDVSIVSWLCSQVDMHGLLSMVPLPLSQGVLLSLLQQ 1088
+ +L+ +AF AL +D+++V ++C VD + P PLSQ VLLSL+QQ
Sbjct: 1266 -AHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLSLIQQ 1324
Query: 1089 LACDINKDTARKLAWLTDVAAAINPADPMIAVHARPIFEQVYQRL 1133
LA D+ T KL++L + ++ +DP+ H + QV Q+L
Sbjct: 1325 LASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKL 1369
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 90/248 (36%), Gaps = 55/248 (22%)
Query: 153 IAVNKHYVCYGLKGGNVRVLNLNTATRSLLRGHTKI-KIWEDSKVAPLII--LKPHGGQP 209
I V H C + L TA+ G+ K +I+ + + P + KPH G+P
Sbjct: 291 IVVKGHSTCLSEGALSPDGTVLATASHD---GYVKFWQIYIEGQDEPRCLHEWKPHDGRP 347
Query: 210 VNSAQYL-----TAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLD 264
++ + P+ L+T NRE+K+W + S W C QT+
Sbjct: 348 LSCLLFCDNHKKQDPDVPFWRFLITGADQNRELKMWCTVS------------WTCLQTIR 395
Query: 265 LKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTV 324
V +V + A L+ ++ ++ +Y + L I+EF +
Sbjct: 396 FSPDIFSSVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQEEGHACFSSISEFLL 455
Query: 325 TMPVLSF--------------------------------TGTIDPPSEHIIKLYCVQTQA 352
T PVLSF G ++ + +IKL+CV T+A
Sbjct: 456 THPVLSFGIQVVSRCRLRHTEVLPAEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKA 515
Query: 353 IQQYSLNL 360
+Q +
Sbjct: 516 LQDVQIRF 523
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 87 QILALLNNNKSKHVGSTAPIYGKRVFGDYVAYDVDAVEEGREPTQQLEVNPITKYGSDPE 146
Q++ L ++ S +G I K V + VA ++ + ++++ P+ KY + +
Sbjct: 78 QVICLSGDDSSTCIG----ILAKEV--EIVASSDSSISSKARGSNKVKIQPVAKYDWEQK 131
Query: 147 LLIGRQIAVNKHYVCYGLKGGN-----VRVLNLNTATRSLLRGHT 186
G IAV+ ++ Y ++ N VRV++++T+ R+LL+G T
Sbjct: 132 YYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFT 176
>sp|Q1LUT1|EDC4_DANRE Enhancer of mRNA-decapping protein 4 OS=Danio rerio GN=edc4 PE=2 SV=1
Length = 1384
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 192/437 (43%), Gaps = 65/437 (14%)
Query: 746 DMLNQLMTMQKELQKQMSNLVTL--PVTKEGRRLEASLGRGIEKAVKASTDALWARFHEE 803
++L L + Q+E+ + N + L VT +++S+ IE A + A+ +E
Sbjct: 935 ELLQMLRSQQREIAELRQNQLDLLQRVTSHMDAVQSSMMAHIEHA-------MLAQQEQE 987
Query: 804 NARNEKLLRD-------RTQQITGLITNLINKDLTASLEKLVKKELAAVGPAIVRTISPS 856
R E++L + Q+ + +N L LEK++++E+ P +TIS S
Sbjct: 988 QRRMERILVEGQSRNQQLQDQLVQQLVQTLNNSLCNRLEKVLREEMKKTVP---QTISKS 1044
Query: 857 IEKT---ITSAIVESFQ--RGVGDKAVNQLERSVNSRLEATVGRQIQAQFQTSGKHALQD 911
+E + S I G + V ++ +S N+ +GR Q +Q
Sbjct: 1045 LEPVTGQMNSTIAAKLTAVEGALKENVTKVVKSKNT--TDAIGRAAAEAMQG----PIQA 1098
Query: 912 ALKSSVEASVIPAFEKSCKAMFEQVDATFQKGMVE-------HTTATLQHFESTHSPLAL 964
A K + ++ V+P FE+ C++MF+Q++ +F++G E H Q + T P+
Sbjct: 1099 AYKETFQSIVLPVFERGCQSMFQQINDSFKQGTNEYIQQLETHIKNRKQRDQDTRDPVIG 1158
Query: 965 VLRESVNSVSS----MAQTLSGEFV-DGQRKLFDLAGVRNNTSAFNPSVPLSNGPLLGLH 1019
L++ ++S+ S +A T++ D Q +L + G ++ + L +
Sbjct: 1159 QLQQMIDSLQSSQDQLASTVTASVSSDVQHQLHMIVGNLQDSILTQVQRIVKGEVSLAMK 1218
Query: 1020 EKVEATMDPTKELSRLVSDR-------KYE----------------EAFTTALQRSDVSI 1056
E+ A + R + Y+ EAF AL +D+++
Sbjct: 1219 EQQAAVTSSIMQAMRSAAGTPVPSAHLDYQAQQASILQLLQQGQLNEAFQQALSAADLNL 1278
Query: 1057 VSWLCSQVDMHGLLSMVPLPLSQGVLLSLLQQLACDINKDTARKLAWLTDVAAAINPADP 1116
V ++C +D + P PL Q VLLSL+QQL+ +++ T K+++L D ++ DP
Sbjct: 1279 VLYVCETIDSQQVFGQQPCPLHQAVLLSLIQQLSTNLSTRTELKISYLEDAVMNLDHGDP 1338
Query: 1117 MIAVHARPIFEQVYQRL 1133
+ H + QV Q+L
Sbjct: 1339 VTRDHMSAVLTQVRQKL 1355
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 83/219 (37%), Gaps = 67/219 (30%)
Query: 203 KPHGGQPVNSAQYLT-----APNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESW 257
+PH GQP++ + P+ L+T N+E+K+W + S W
Sbjct: 338 QPHNGQPLSCLLFCDNHKKQDPDVPFWRFLITGADQNQELKMWCTVS------------W 385
Query: 258 KCTQTLDLKSSAKPRVEEAFFNQVVVLS-------QAGLLLFANAKKNAIYSVHLGYGNN 310
C QT+ + S P FN V+ S A L+ ++ ++ +Y + L
Sbjct: 386 TCLQTI--RFSPDP------FNCGVLPSLKASLDLSAEFLILSDVQRKVLYVMELLQDQE 437
Query: 311 SAATRIDYIAEFTVTMPVLSFTGTID------------PPSEHI---------------- 342
++EF +T PVLSF G D PP E
Sbjct: 438 KGRASFTAVSEFLLTHPVLSF-GVQDVSRARLRHTEVLPPEEESESMTAEGNQGTSESRS 496
Query: 343 ---IKLYCVQTQAIQQYSLNLFQCLPPPAESGGLERPDS 378
IKLYCV T+++Q + FQ P +S L P S
Sbjct: 497 GIQIKLYCVHTKSLQDVQI-WFQ--PNQGDSSSLFMPQS 532
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 130 TQQLEVNPITKYGSDPELLIGRQIAVNKHYVCYGLKGGN----VRVLNLNTATRSLLRGH 185
+ ++++ P+ KY + + G IAV+ Y+ Y ++G N +RVL+L++ RSLL+G
Sbjct: 113 SNKVKIQPVAKYDWEHKYYYGNLIAVSNTYLAYAIRGANNHSMIRVLHLSSTERSLLKGF 172
Query: 186 T 186
T
Sbjct: 173 T 173
>sp|Q3ZAV8|EDC4_RAT Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus GN=Edc4
PE=2 SV=1
Length = 1407
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 179/411 (43%), Gaps = 66/411 (16%)
Query: 775 RRLEASLGRGIEKAVKASTD-ALWARFHEENARNEKLLRDRTQQITGLITNLINKDLTAS 833
+RL A L G++ V + AL R +E R E+ L + QQ G + + + L+ +
Sbjct: 979 QRLCAQL-EGLQSTVTDHVERALETRHEQEQRRLERALAE-GQQRGGQLQEQLTQQLSQA 1036
Query: 834 LEKLVKKELAAVGPAIVRTISPSIEKTITSAIVESFQRGVGDKAVNQLERSVNSRLEATV 893
L +AV + R+I I+KT+ + S + G QL SV ++L A
Sbjct: 1037 LS-------SAVAGRLERSIRDEIKKTVPPCVSRSLEPVAG-----QLSNSVATKLTAVE 1084
Query: 894 G-------RQIQAQFQTSG---------KHALQDALKSSVEASVIPAFEKSCKAMFEQVD 937
G + ++++ T + +Q A + + ++ V+PAFEKSC+AMF+Q++
Sbjct: 1085 GSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQIN 1144
Query: 938 ATFQKGMVEHTTATLQHFES-------THSPLALVLRESV----NSVSSMAQTLSGEF-V 985
+F+ G E+ H +S P+ LR V N+ MA T+S
Sbjct: 1145 DSFRLGTQEYLQQLDSHMKSRKAREQEAREPVLAQLRGLVSTLQNATEQMAATVSSSVRA 1204
Query: 986 DGQRKLFDLAG-------------VRNNTS-AFNPSVPLSNGPLLGLHEKVEATMDPTKE 1031
+ Q +L G V+ S A ++ T P+
Sbjct: 1205 EVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQATVTSSIMQAMRSAAGTPVPSAH 1264
Query: 1032 LS---------RLVSDRKYEEAFTTALQRSDVSIVSWLCSQVDMHGLLSMVPLPLSQGVL 1082
L +L+ +AF AL +D+++V ++C VD + P PLSQ VL
Sbjct: 1265 LDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVL 1324
Query: 1083 LSLLQQLACDINKDTARKLAWLTDVAAAINPADPMIAVHARPIFEQVYQRL 1133
LSL+QQLA D+ + KL++L + ++ +DP+ H + QV Q+L
Sbjct: 1325 LSLIQQLASDLGTRSDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKL 1375
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 72/195 (36%), Gaps = 49/195 (25%)
Query: 203 KPHGGQPVNSAQYL-----TAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESW 257
KPH G+P++ + P L+T NRE+K+W + S W
Sbjct: 341 KPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVS------------W 388
Query: 258 KCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRID 317
C QT+ V +V + A L+ ++ ++ +Y + L +
Sbjct: 389 TCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQDEGRACFS 448
Query: 318 YIAEFTVTMPVLSF--------------------------------TGTIDPPSEHIIKL 345
I+EF +T PVLSF GT++ + +IKL
Sbjct: 449 SISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEEESDSLGTESSHGAGTLESAAGVLIKL 508
Query: 346 YCVQTQAIQQYSLNL 360
+CV T+A+Q +
Sbjct: 509 FCVHTKALQDVQIRF 523
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 87 QILALLNNNKSKHVGSTAPIYGKRVFGDYVAYDVDAVEEGREPTQQLEVNPITKYGSDPE 146
Q++ L ++ S +G I K V + VA ++ + ++++ P+ KY + +
Sbjct: 78 QVICLSGDDSSTCIG----ILAKEV--EIVASSDSSISSKARGSNKVKIQPVAKYDWEQK 131
Query: 147 LLIGRQIAVNKHYVCYGLKGGN-----VRVLNLNTATRSLLRGHT 186
G IAV+ ++ Y ++ N VRV++++T+ R+LL+G T
Sbjct: 132 YYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFT 176
>sp|Q3UJB9|EDC4_MOUSE Enhancer of mRNA-decapping protein 4 OS=Mus musculus GN=Edc4 PE=1
SV=2
Length = 1406
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 181/411 (44%), Gaps = 66/411 (16%)
Query: 775 RRLEASLGRGIEKAVKASTD-ALWARFHEENARNEKLLRDRTQQITGLITNLINKDLTAS 833
+RL A L G++ V + AL R +E R E+ L + QQ G + + + L+ +
Sbjct: 978 QRLCAQL-EGLQSTVTDHVERALETRHEQEQRRLERALAE-GQQRGGQLQEQLTQQLSQA 1035
Query: 834 LEKLVKKELAAVGPAIVRTISPSIEKTITSAIVESFQRGVGDKAVNQLERSVNSRLEATV 893
L +AV + R++ I+KT+ + S + G QL SV ++L A
Sbjct: 1036 LS-------SAVAGRLERSVRDEIKKTVPPCVSRSLEPVAG-----QLSNSVATKLTAVE 1083
Query: 894 G-------RQIQAQFQTSG---------KHALQDALKSSVEASVIPAFEKSCKAMFEQVD 937
G + ++++ T + +Q A + + ++ V+PAFEKSC+AMF+Q++
Sbjct: 1084 GSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQIN 1143
Query: 938 ATFQKGMVEHTTATLQHFES-------THSPLALVLRESVNSVSS----MAQTLSGEF-V 985
+F+ G E+ H +S P+ LR V+++ S MA T+S
Sbjct: 1144 DSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVSSSVRA 1203
Query: 986 DGQRKLFDLAG-------------VRNNTS-AFNPSVPLSNGPLLGLHEKVEATMDPTKE 1031
+ Q +L G V+ S A ++ T P+
Sbjct: 1204 EVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQATVTSSIMQAMRSAAGTPVPSAH 1263
Query: 1032 LS---------RLVSDRKYEEAFTTALQRSDVSIVSWLCSQVDMHGLLSMVPLPLSQGVL 1082
L +L+ +AF AL +D+++V ++C VD + P PLSQ VL
Sbjct: 1264 LDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVL 1323
Query: 1083 LSLLQQLACDINKDTARKLAWLTDVAAAINPADPMIAVHARPIFEQVYQRL 1133
LSL+QQLA D+ + KL++L + ++ +DP+ H + QV Q+L
Sbjct: 1324 LSLIQQLASDLGTRSDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKL 1374
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 71/195 (36%), Gaps = 49/195 (25%)
Query: 203 KPHGGQPVNSAQYL-----TAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESW 257
KPH G+P++ + P L+T NRE+K+W + S W
Sbjct: 341 KPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVS------------W 388
Query: 258 KCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRID 317
C QT+ V +V + A L+ ++ ++ +Y + L +
Sbjct: 389 TCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQDEGRACFS 448
Query: 318 YIAEFTVTMPVLSF--------------------------------TGTIDPPSEHIIKL 345
I+EF +T PVLSF G ++ + +IKL
Sbjct: 449 SISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEEENDSLGTESSHGAGALESAAGVLIKL 508
Query: 346 YCVQTQAIQQYSLNL 360
+CV T+A+Q +
Sbjct: 509 FCVHTKALQDVQIRF 523
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 87 QILALLNNNKSKHVGSTAPIYGKRVFGDYVAYDVDAVEEGREPTQQLEVNPITKYGSDPE 146
Q++ L ++ S +G I K V + VA ++ + ++++ P+ KY + +
Sbjct: 78 QVICLSGDDSSTCIG----ILAKEV--EIVASSDSSISSKARGSNKVKIQPVAKYDWEQK 131
Query: 147 LLIGRQIAVNKHYVCYGLKGGN-----VRVLNLNTATRSLLRGHT 186
G IAV+ ++ Y ++ N VRV++++T+ R+LL+G T
Sbjct: 132 YYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFT 176
>sp|Q9VKK1|EDC4_DROME Enhancer of mRNA-decapping protein 4 homolog OS=Drosophila
melanogaster GN=Ge-1 PE=1 SV=2
Length = 1354
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 187/432 (43%), Gaps = 62/432 (14%)
Query: 760 KQMSNLVTLPVTKEGRRLEASLGRGIEKAVKASTDALWARFHEENARNEKLLRDRTQQIT 819
K +S L + + +E L R + K T+ L AR + + +L+ Q +
Sbjct: 943 KNLSQLAYKIEMQLSKLMEQYLKRYENEHKKKLTEFLAARESQNRELRDSVLQVLNQYVM 1002
Query: 820 GLITNLINKDLTASLEKLVKKELAAVGPAIVRTISPSIEKTITSAIVESFQR-GVGDKAV 878
T++I L L++ ++ ++ ++++ VE Q+ V DK V
Sbjct: 1003 NHFTDIIGNVLNMELQR-----------QLLPRVNANMDQLQAQMQVEIVQKLSVFDKTV 1051
Query: 879 --NQLERSVNSRLEATVGRQIQAQFQTSGKHALQDALKSSVEASVIPAFEKSCKAMFEQV 936
N + + + T G+ + QTS LQ A S+ +++IPA+EKS + MF+Q+
Sbjct: 1052 KENIAQVCKSKQFLDTFGKSVLIGVQTS----LQTAFIESMSSTLIPAYEKSSQNMFKQL 1107
Query: 937 DATFQKG----MVEHTTATLQHF----------ESTHSPLALVLRESVNSVSSMAQTLSG 982
F G MV+ T LQH E ++ L+++ + +S+ L+
Sbjct: 1108 HDAFSVGIKDFMVQFNT-YLQHMPQPQAGSGNTEEINNKLSMLKQLVESSLHKHRTELTD 1166
Query: 983 EFVDGQRKLFDL-------------AGVRNNTSAFNPSV---PLSNGPLLGLHEKVEATM 1026
++ QR++ L A +R + A N ++ + P L + ++
Sbjct: 1167 AMLETQREVKSLEILLARQVQETIRAELRKHMEAQNVAMRSQAATPAPPYDLRDSIK--- 1223
Query: 1027 DPTKELSRLVSDRKYEEAFTTALQRSDVSIVSWLCSQVDMHGLLSMVPLPLSQGVLLSLL 1086
+L+ + +AF AL +D+ +V + D + + L Q VLLSL+
Sbjct: 1224 -------QLLMAGQINKAFHQALLANDLGLVEFTLRHTDSNQAFAPEGCRLEQKVLLSLI 1276
Query: 1087 QQLACDINKDTARKLAWLTDVAAAINPADPMIAVHARPIFEQVYQRLHH-QRSSPTISGA 1145
QQ++ D+ K +L + AIN ADP+ HA + ++Y+ ++SP +
Sbjct: 1277 QQISADMTNHNELKQRYLNEALLAINMADPITREHAPKVLTELYRNCQQFIKNSP--KNS 1334
Query: 1146 ELSSIRLLIHVI 1157
+ S++RLL+ I
Sbjct: 1335 QFSNVRLLMKAI 1346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.127 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 428,523,157
Number of Sequences: 539616
Number of extensions: 19023214
Number of successful extensions: 107748
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 701
Number of HSP's that attempted gapping in prelim test: 80590
Number of HSP's gapped (non-prelim): 13953
length of query: 1165
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1036
effective length of database: 121,958,995
effective search space: 126349518820
effective search space used: 126349518820
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)