Query 001070
Match_columns 1165
No_of_seqs 226 out of 259
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 09:31:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001070.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001070hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vxg_A LD41624, GE-1, CG6181-P 100.0 3.1E-36 1.1E-40 299.4 12.4 137 1027-1165 2-139 (139)
2 2ynn_A Coatomer subunit beta'; 99.4 9E-13 3.1E-17 139.7 15.4 128 153-306 21-171 (304)
3 4gqb_B Methylosome protein 50; 99.4 4E-13 1.4E-17 147.3 12.0 129 152-305 132-287 (344)
4 3ow8_A WD repeat-containing pr 99.4 1.6E-12 5.6E-17 139.9 12.8 116 155-297 174-312 (321)
5 3frx_A Guanine nucleotide-bind 99.4 6.6E-12 2.2E-16 134.2 15.3 161 156-350 118-317 (319)
6 1vyh_C Platelet-activating fac 99.3 2.8E-12 9.5E-17 142.4 12.4 122 156-305 119-263 (410)
7 2aq5_A Coronin-1A; WD40 repeat 99.3 2E-11 6.9E-16 133.2 18.7 173 156-356 142-348 (402)
8 2xzm_R RACK1; ribosome, transl 99.3 2E-11 6.7E-16 131.3 17.1 173 156-351 38-286 (343)
9 1got_B GT-beta; complex (GTP-b 99.3 1.7E-11 5.7E-16 132.0 16.3 126 153-306 105-256 (340)
10 4g56_B MGC81050 protein; prote 99.3 1E-11 3.5E-16 135.6 13.7 167 155-354 149-347 (357)
11 2ynn_A Coatomer subunit beta'; 99.3 1.1E-11 3.7E-16 131.4 13.4 129 152-305 102-257 (304)
12 4gqb_B Methylosome protein 50; 99.3 6.8E-12 2.3E-16 137.5 11.9 124 156-306 180-330 (344)
13 1vyh_C Platelet-activating fac 99.3 1.2E-11 4.1E-16 137.3 13.5 126 156-306 203-368 (410)
14 1erj_A Transcriptional repress 99.3 1.2E-11 4E-16 136.1 13.3 135 156-306 134-340 (393)
15 3frx_A Guanine nucleotide-bind 99.3 3E-11 1E-15 129.2 15.8 165 153-351 73-268 (319)
16 3dwl_C Actin-related protein 2 99.3 1.5E-11 5.1E-16 131.5 12.6 175 153-351 19-237 (377)
17 3iz6_a 40S ribosomal protein R 99.3 4.4E-11 1.5E-15 130.9 16.6 129 157-306 170-328 (380)
18 4aez_A CDC20, WD repeat-contai 99.3 1.4E-10 4.8E-15 127.1 20.0 169 151-352 180-382 (401)
19 3fm0_A Protein CIAO1; WDR39,SG 99.3 5.2E-11 1.8E-15 128.7 16.1 141 156-311 116-287 (345)
20 2hes_X YDR267CP; beta-propelle 99.3 5.7E-11 1.9E-15 127.6 16.3 170 156-350 69-280 (330)
21 4ery_A WD repeat-containing pr 99.3 3.7E-11 1.3E-15 126.1 14.2 125 155-307 33-180 (312)
22 3ow8_A WD repeat-containing pr 99.3 3E-11 1E-15 130.0 13.5 126 153-306 130-278 (321)
23 1nr0_A Actin interacting prote 99.2 3.3E-11 1.1E-15 140.8 14.8 169 153-350 67-270 (611)
24 3fm0_A Protein CIAO1; WDR39,SG 99.2 2.1E-11 7.1E-16 131.8 12.1 127 155-306 26-180 (345)
25 3bg1_A Protein SEC13 homolog; 99.2 7.5E-11 2.6E-15 125.9 15.6 178 155-348 23-291 (316)
26 3dm0_A Maltose-binding peripla 99.2 7.6E-11 2.6E-15 139.2 15.5 167 154-353 439-635 (694)
27 4ery_A WD repeat-containing pr 99.2 1.3E-10 4.6E-15 121.8 15.7 125 155-306 75-222 (312)
28 2pm7_B Protein transport prote 99.2 3.1E-10 1.1E-14 119.8 17.5 131 157-307 67-238 (297)
29 2aq5_A Coronin-1A; WD40 repeat 99.2 2.5E-10 8.6E-15 124.6 16.9 166 156-352 93-301 (402)
30 4e54_B DNA damage-binding prot 99.2 9.1E-11 3.1E-15 130.5 13.5 163 156-350 131-327 (435)
31 3iz6_a 40S ribosomal protein R 99.2 8.6E-11 2.9E-15 128.6 13.1 127 156-305 217-373 (380)
32 1got_B GT-beta; complex (GTP-b 99.2 1.1E-10 3.7E-15 125.7 13.2 116 156-297 195-334 (340)
33 2w18_A PALB2, fancn, partner a 99.2 1.7E-10 5.9E-15 130.3 15.2 119 156-304 192-354 (356)
34 3vl1_A 26S proteasome regulato 99.2 4.5E-10 1.5E-14 121.6 17.4 167 156-350 150-365 (420)
35 3ei3_B DNA damage-binding prot 99.2 4.5E-10 1.5E-14 121.0 17.0 164 156-351 84-283 (383)
36 2hes_X YDR267CP; beta-propelle 99.2 1.4E-10 5E-15 124.4 13.2 130 152-305 19-182 (330)
37 4gga_A P55CDC, cell division c 99.2 5.8E-10 2E-14 123.2 18.3 160 156-348 158-393 (420)
38 4aez_A CDC20, WD repeat-contai 99.2 3.6E-10 1.2E-14 123.8 16.5 161 156-351 145-337 (401)
39 2pbi_B Guanine nucleotide-bind 99.2 3.4E-10 1.2E-14 123.3 16.1 128 153-306 114-270 (354)
40 3lrv_A PRE-mRNA-splicing facto 99.2 1.4E-10 4.7E-15 124.5 12.7 129 156-309 138-294 (343)
41 3vl1_A 26S proteasome regulato 99.2 1.5E-10 5.1E-15 125.3 12.9 126 153-306 64-211 (420)
42 2pbi_B Guanine nucleotide-bind 99.1 1.5E-10 5.3E-15 125.9 12.8 116 156-297 209-348 (354)
43 1gxr_A ESG1, transducin-like e 99.1 1.7E-09 5.7E-14 112.0 19.9 160 155-351 107-297 (337)
44 3jrp_A Fusion protein of prote 99.1 8E-10 2.7E-14 116.4 17.6 172 157-351 69-288 (379)
45 2xyi_A Probable histone-bindin 99.1 1.1E-09 3.6E-14 122.0 19.5 134 150-308 184-354 (430)
46 4g56_B MGC81050 protein; prote 99.1 1.2E-10 4.2E-15 127.1 11.5 127 152-306 186-342 (357)
47 1nr0_A Actin interacting prote 99.1 1.8E-10 6.1E-15 134.6 13.6 131 156-306 158-354 (611)
48 4aow_A Guanine nucleotide-bind 99.1 2.5E-10 8.7E-15 119.0 13.3 121 156-306 139-285 (340)
49 3jrp_A Fusion protein of prote 99.1 7.3E-10 2.5E-14 116.7 16.8 168 155-350 21-240 (379)
50 4a11_B DNA excision repair pro 99.1 1.9E-09 6.4E-14 114.7 19.8 136 156-309 111-278 (408)
51 3v7d_B Cell division control p 99.1 2.6E-10 8.9E-15 126.0 13.6 142 152-307 127-341 (464)
52 2pm9_A Protein WEB1, protein t 99.1 4.5E-10 1.5E-14 120.8 15.0 169 155-350 77-294 (416)
53 3dw8_B Serine/threonine-protei 99.1 6.5E-10 2.2E-14 121.0 16.1 134 158-307 108-315 (447)
54 2ovr_B FBW7, F-BOX/WD repeat p 99.1 7E-10 2.4E-14 122.7 16.4 136 152-310 284-443 (445)
55 2ymu_A WD-40 repeat protein; u 99.1 2.7E-10 9.1E-15 128.9 13.2 114 155-297 436-571 (577)
56 3i2n_A WD repeat-containing pr 99.1 6.5E-10 2.2E-14 116.4 15.2 139 155-307 178-353 (357)
57 3i2n_A WD repeat-containing pr 99.1 1E-09 3.6E-14 114.8 16.7 169 157-351 80-292 (357)
58 1erj_A Transcriptional repress 99.1 6.5E-10 2.2E-14 122.2 15.6 167 153-351 72-288 (393)
59 3f3f_A Nucleoporin SEH1; struc 99.1 1.8E-09 6.3E-14 110.8 17.8 87 155-246 21-145 (351)
60 2vdu_B TRNA (guanine-N(7)-)-me 99.1 1.2E-09 4.1E-14 121.8 16.6 172 156-350 160-391 (450)
61 2xyi_A Probable histone-bindin 99.1 8.6E-10 2.9E-14 122.7 15.4 138 156-307 243-410 (430)
62 3gre_A Serine/threonine-protei 99.1 5E-10 1.7E-14 122.7 13.3 183 107-308 122-360 (437)
63 3zwl_B Eukaryotic translation 99.1 2E-09 6.9E-14 112.6 16.7 154 156-334 43-268 (369)
64 3dw8_B Serine/threonine-protei 99.1 1.2E-09 4E-14 119.0 15.3 173 153-350 36-315 (447)
65 2pm7_B Protein transport prote 99.1 1.1E-09 3.9E-14 115.5 14.6 129 155-307 19-189 (297)
66 3dwl_C Actin-related protein 2 99.1 1.9E-10 6.5E-15 123.0 8.7 118 156-297 111-273 (377)
67 4h5i_A Guanine nucleotide-exch 99.1 6.6E-10 2.3E-14 121.9 13.2 74 208-307 270-343 (365)
68 2xzm_R RACK1; ribosome, transl 99.1 3E-09 1E-13 114.3 17.7 123 156-308 129-286 (343)
69 4e54_B DNA damage-binding prot 99.1 2E-10 6.9E-15 127.7 8.7 128 156-308 176-328 (435)
70 3ei3_B DNA damage-binding prot 99.0 1.2E-09 4.2E-14 117.5 14.2 129 156-309 130-284 (383)
71 4a11_B DNA excision repair pro 99.0 2.6E-09 8.8E-14 113.7 16.3 129 156-309 55-220 (408)
72 2vdu_B TRNA (guanine-N(7)-)-me 99.0 1.9E-09 6.6E-14 120.1 15.9 134 153-307 203-391 (450)
73 3k26_A Polycomb protein EED; W 99.0 8.4E-10 2.9E-14 115.6 12.0 173 156-350 127-366 (366)
74 1l0q_A Surface layer protein; 99.0 3.4E-09 1.2E-13 113.9 17.0 123 157-307 2-147 (391)
75 3dm0_A Maltose-binding peripla 99.0 9.3E-10 3.2E-14 129.9 13.7 121 156-306 483-631 (694)
76 1k8k_C P40, ARP2/3 complex 41 99.0 1.6E-09 5.5E-14 114.4 14.0 123 156-307 107-274 (372)
77 3mkq_A Coatomer beta'-subunit; 99.0 2E-09 6.7E-14 127.1 16.0 127 154-307 22-172 (814)
78 4gq1_A NUP37; propeller, trans 99.0 7.9E-10 2.7E-14 122.0 11.8 149 155-310 99-289 (393)
79 4ggc_A P55CDC, cell division c 99.0 7.5E-09 2.6E-13 106.9 18.2 159 156-347 78-312 (318)
80 2j04_B YDR362CP, TAU91; beta p 99.0 3.9E-10 1.3E-14 132.0 9.7 126 157-305 225-384 (524)
81 3zwl_B Eukaryotic translation 99.0 4.4E-09 1.5E-13 110.0 16.5 126 154-307 184-346 (369)
82 2pm9_A Protein WEB1, protein t 99.0 3.2E-09 1.1E-13 114.1 15.7 134 151-310 169-340 (416)
83 3sfz_A APAF-1, apoptotic pepti 99.0 1.3E-09 4.5E-14 135.7 14.4 129 153-307 623-774 (1249)
84 2ymu_A WD-40 repeat protein; u 99.0 1.2E-09 4E-14 123.7 12.7 120 155-304 395-536 (577)
85 2oaj_A Protein SNI1; WD40 repe 99.0 2.2E-09 7.5E-14 132.9 16.0 128 155-306 445-660 (902)
86 1r5m_A SIR4-interacting protei 99.0 1.8E-09 6.1E-14 115.2 13.2 134 156-305 258-423 (425)
87 3vu4_A KMHSV2; beta-propeller 99.0 9.3E-09 3.2E-13 112.0 19.1 130 152-308 105-272 (355)
88 1k8k_C P40, ARP2/3 complex 41 99.0 4.8E-09 1.6E-13 110.8 16.1 127 156-306 19-172 (372)
89 3odt_A Protein DOA1; ubiquitin 99.0 2.4E-09 8.4E-14 109.9 13.3 123 156-308 154-297 (313)
90 3v7d_B Cell division control p 99.0 2.4E-09 8.3E-14 118.2 14.1 125 152-308 275-422 (464)
91 3f3f_A Nucleoporin SEH1; struc 99.0 9.3E-09 3.2E-13 105.5 17.5 184 107-308 70-338 (351)
92 1gxr_A ESG1, transducin-like e 99.0 7E-09 2.4E-13 107.4 16.4 160 155-351 61-256 (337)
93 1l0q_A Surface layer protein; 99.0 7.8E-09 2.7E-13 111.1 17.1 163 152-350 78-275 (391)
94 2j04_B YDR362CP, TAU91; beta p 99.0 5E-10 1.7E-14 131.1 8.4 119 153-297 272-419 (524)
95 1r5m_A SIR4-interacting protei 99.0 4.5E-09 1.5E-13 112.1 14.6 160 156-352 160-363 (425)
96 1sq9_A Antiviral protein SKI8; 99.0 8.4E-09 2.9E-13 110.5 16.3 134 155-307 135-322 (397)
97 2ovr_B FBW7, F-BOX/WD repeat p 99.0 4.2E-09 1.4E-13 116.5 14.3 124 152-307 124-268 (445)
98 3bg1_A Protein SEC13 homolog; 99.0 1.9E-09 6.5E-14 115.1 11.1 128 157-305 117-291 (316)
99 3mmy_A MRNA export factor; mRN 99.0 1.7E-09 5.8E-14 113.1 10.5 115 155-295 139-335 (368)
100 4aow_A Guanine nucleotide-bind 99.0 4.7E-09 1.6E-13 109.4 13.7 130 157-308 185-338 (340)
101 3lrv_A PRE-mRNA-splicing facto 98.9 1.9E-08 6.4E-13 108.0 18.5 123 160-309 88-246 (343)
102 1sq9_A Antiviral protein SKI8; 98.9 7.3E-09 2.5E-13 111.0 15.3 137 151-308 190-396 (397)
103 4ggc_A P55CDC, cell division c 98.9 5.1E-09 1.8E-13 108.1 13.0 116 155-296 160-305 (318)
104 1pgu_A Actin interacting prote 98.9 7E-09 2.4E-13 117.2 15.2 157 156-350 77-283 (615)
105 2oaj_A Protein SNI1; WD40 repe 98.9 1.6E-09 5.6E-14 134.0 10.9 116 153-282 496-687 (902)
106 1p22_A F-BOX/WD-repeat protein 98.9 5.3E-09 1.8E-13 115.8 13.4 126 152-306 138-284 (435)
107 3odt_A Protein DOA1; ubiquitin 98.9 1.4E-08 4.9E-13 104.3 15.6 161 151-351 108-297 (313)
108 3vu4_A KMHSV2; beta-propeller 98.9 1.1E-08 3.6E-13 111.5 15.4 143 153-309 143-338 (355)
109 1p22_A F-BOX/WD-repeat protein 98.9 1.2E-08 4.2E-13 113.0 15.8 167 152-352 218-416 (435)
110 3bws_A Protein LP49; two-domai 98.9 1.8E-08 6.1E-13 109.8 16.4 125 156-307 133-292 (433)
111 4gq1_A NUP37; propeller, trans 98.9 1.9E-09 6.6E-14 118.9 8.5 57 227-305 331-387 (393)
112 3sfz_A APAF-1, apoptotic pepti 98.9 5.9E-09 2E-13 129.9 13.8 128 153-308 1011-1159(1249)
113 4gga_A P55CDC, cell division c 98.9 8.5E-09 2.9E-13 113.9 13.1 126 153-305 238-393 (420)
114 1pgu_A Actin interacting prote 98.9 8.5E-09 2.9E-13 116.5 12.9 130 152-306 451-613 (615)
115 3k26_A Polycomb protein EED; W 98.9 1.5E-08 5E-13 106.2 13.8 127 157-307 34-192 (366)
116 3gre_A Serine/threonine-protei 98.9 7.7E-09 2.6E-13 113.3 11.7 163 107-306 75-291 (437)
117 2w18_A PALB2, fancn, partner a 98.9 1.1E-08 3.6E-13 115.9 12.9 141 131-294 88-245 (356)
118 3jro_A Fusion protein of prote 98.8 2E-08 6.8E-13 121.1 15.3 167 156-350 20-238 (753)
119 4h5i_A Guanine nucleotide-exch 98.8 4.7E-08 1.6E-12 107.2 17.0 134 188-352 159-302 (365)
120 3jro_A Fusion protein of prote 98.8 2.8E-08 9.5E-13 119.8 15.4 170 157-349 67-284 (753)
121 3mmy_A MRNA export factor; mRN 98.8 1.5E-08 5.1E-13 106.0 10.9 121 157-307 54-199 (368)
122 1yfq_A Cell cycle arrest prote 98.8 3.7E-08 1.3E-12 103.0 12.9 125 154-308 65-226 (342)
123 3mkq_A Coatomer beta'-subunit; 98.8 4.2E-08 1.4E-12 115.8 14.6 128 155-307 107-259 (814)
124 2oit_A Nucleoporin 214KDA; NH2 98.8 3.1E-08 1.1E-12 112.4 12.6 132 156-308 103-279 (434)
125 3bws_A Protein LP49; two-domai 98.7 6.6E-08 2.3E-12 105.3 12.7 126 153-306 175-333 (433)
126 2j04_A TAU60, YPL007P, hypothe 98.7 5.2E-08 1.8E-12 116.4 12.7 121 153-303 137-295 (588)
127 1ri6_A Putative isomerase YBHE 98.7 1E-06 3.6E-11 91.6 19.9 180 151-349 87-307 (343)
128 1yfq_A Cell cycle arrest prote 98.6 3.5E-07 1.2E-11 95.6 12.8 119 151-297 154-314 (342)
129 2j04_A TAU60, YPL007P, hypothe 98.5 2.7E-07 9.2E-12 110.3 12.4 128 150-307 90-254 (588)
130 2hqs_A Protein TOLB; TOLB, PAL 98.4 1.4E-06 4.8E-11 97.6 14.5 127 153-307 186-344 (415)
131 3vgz_A Uncharacterized protein 98.4 4.8E-06 1.7E-10 87.4 17.7 132 153-307 96-262 (353)
132 2hqs_A Protein TOLB; TOLB, PAL 98.4 1.3E-06 4.3E-11 97.9 12.9 124 157-308 143-301 (415)
133 1nir_A Nitrite reductase; hemo 98.4 1E-06 3.4E-11 103.3 11.9 128 153-306 186-354 (543)
134 3u4y_A Uncharacterized protein 98.4 9.3E-06 3.2E-10 85.2 17.8 120 160-306 13-159 (331)
135 3hfq_A Uncharacterized protein 98.4 1.6E-05 5.5E-10 84.5 19.2 140 153-307 93-271 (347)
136 1nir_A Nitrite reductase; hemo 98.3 4.6E-06 1.6E-10 97.8 15.5 140 153-308 145-312 (543)
137 3scy_A Hypothetical bacterial 98.3 2.5E-05 8.6E-10 83.7 19.5 136 152-307 104-291 (361)
138 3u4y_A Uncharacterized protein 98.3 3.2E-06 1.1E-10 88.6 12.2 126 153-306 91-251 (331)
139 3vgz_A Uncharacterized protein 98.3 7.7E-06 2.6E-10 85.9 14.5 115 153-296 192-334 (353)
140 2oit_A Nucleoporin 214KDA; NH2 98.3 2.2E-06 7.6E-11 97.3 10.7 129 149-305 38-221 (434)
141 1ri6_A Putative isomerase YBHE 98.3 5.8E-06 2E-10 86.0 12.7 132 153-307 45-209 (343)
142 1jmx_B Amine dehydrogenase; ox 98.2 3.5E-06 1.2E-10 88.1 9.7 127 153-306 7-174 (349)
143 1xfd_A DIP, dipeptidyl aminope 98.2 8.1E-06 2.8E-10 95.7 13.5 93 188-304 230-341 (723)
144 2z3z_A Dipeptidyl aminopeptida 98.2 1.3E-05 4.6E-10 94.0 15.3 120 165-307 233-391 (706)
145 1pby_B Quinohemoprotein amine 98.2 1E-05 3.4E-10 84.0 12.7 122 153-307 142-310 (337)
146 3scy_A Hypothetical bacterial 98.2 2.4E-05 8.1E-10 83.9 15.3 135 151-307 158-337 (361)
147 1pby_B Quinohemoprotein amine 98.2 9E-06 3.1E-10 84.4 11.5 122 157-307 1-163 (337)
148 3hfq_A Uncharacterized protein 98.1 1.6E-05 5.4E-10 84.6 13.6 133 153-307 146-317 (347)
149 3pe7_A Oligogalacturonate lyas 98.1 3.9E-05 1.3E-09 82.2 15.7 130 152-306 42-224 (388)
150 2ojh_A Uncharacterized protein 98.1 5.6E-05 1.9E-09 76.0 15.6 130 153-307 92-258 (297)
151 2ojh_A Uncharacterized protein 98.1 3E-05 1E-09 78.0 13.3 126 153-306 49-205 (297)
152 2ecf_A Dipeptidyl peptidase IV 98.1 5.4E-06 1.9E-10 97.6 9.1 124 153-296 44-229 (741)
153 1jmx_B Amine dehydrogenase; ox 98.0 3.5E-05 1.2E-09 80.5 12.7 59 223-306 266-324 (349)
154 1xfd_A DIP, dipeptidyl aminope 98.0 3.4E-05 1.2E-09 90.4 13.0 136 153-307 68-289 (723)
155 1k32_A Tricorn protease; prote 97.9 4.4E-05 1.5E-09 95.2 12.8 112 156-295 347-491 (1045)
156 2ecf_A Dipeptidyl peptidase IV 97.9 3.9E-05 1.3E-09 90.4 10.9 129 153-307 116-321 (741)
157 1z68_A Fibroblast activation p 97.8 2.6E-05 8.8E-10 91.9 8.4 135 153-305 67-285 (719)
158 3o4h_A Acylamino-acid-releasin 97.8 2.6E-05 8.7E-10 89.9 8.1 118 153-305 157-313 (582)
159 4a5s_A Dipeptidyl peptidase 4 97.8 3.3E-05 1.1E-09 92.6 9.2 82 153-245 24-142 (740)
160 3o4h_A Acylamino-acid-releasin 97.8 7.7E-05 2.6E-09 86.0 11.4 125 153-308 29-185 (582)
161 1k32_A Tricorn protease; prote 97.7 8.2E-05 2.8E-09 92.8 11.8 125 153-307 303-461 (1045)
162 2z3z_A Dipeptidyl aminopeptida 97.7 0.00011 3.9E-09 86.1 11.5 127 156-308 92-294 (706)
163 1jof_A Carboxy-CIS,CIS-muconat 97.7 0.00053 1.8E-08 74.6 15.5 103 188-306 169-290 (365)
164 3fvz_A Peptidyl-glycine alpha- 97.6 0.00044 1.5E-08 74.4 13.8 134 150-307 145-322 (329)
165 1jof_A Carboxy-CIS,CIS-muconat 97.6 0.00056 1.9E-08 74.4 14.1 133 153-307 45-224 (365)
166 4a5s_A Dipeptidyl peptidase 4 97.5 0.00021 7.3E-09 85.6 9.9 48 152-199 68-145 (740)
167 3pe7_A Oligogalacturonate lyas 97.4 0.00056 1.9E-08 73.3 11.0 132 152-309 87-275 (388)
168 3azo_A Aminopeptidase; POP fam 97.3 0.00062 2.1E-08 79.3 10.5 135 153-306 137-324 (662)
169 1z68_A Fibroblast activation p 97.3 0.0014 4.7E-08 77.3 12.9 129 153-307 176-393 (719)
170 1q7f_A NHL, brain tumor CG1071 97.2 0.0075 2.5E-07 62.4 15.8 127 151-306 124-279 (286)
171 3fvz_A Peptidyl-glycine alpha- 97.1 0.0092 3.2E-07 64.1 16.3 154 135-306 8-226 (329)
172 1xip_A Nucleoporin NUP159; bet 97.0 0.0019 6.5E-08 73.8 10.4 116 151-292 91-230 (388)
173 1q7f_A NHL, brain tumor CG1071 97.0 0.0082 2.8E-07 62.1 14.3 127 152-305 34-192 (286)
174 3c5m_A Oligogalacturonate lyas 97.0 0.0019 6.5E-08 68.9 9.4 132 152-307 87-273 (396)
175 3dsm_A Uncharacterized protein 97.0 0.01 3.4E-07 64.2 15.1 130 149-307 85-253 (328)
176 3c5m_A Oligogalacturonate lyas 97.0 0.0018 6.1E-08 69.1 9.1 130 152-306 42-224 (396)
177 2dg1_A DRP35, lactonase; beta 96.9 0.01 3.6E-07 62.5 14.5 132 151-306 48-212 (333)
178 3dsm_A Uncharacterized protein 96.9 0.0079 2.7E-07 65.0 13.2 129 150-306 46-211 (328)
179 3no2_A Uncharacterized protein 96.8 0.006 2E-07 65.2 11.6 128 157-306 5-154 (276)
180 2gop_A Trilobed protease; beta 96.8 0.0044 1.5E-07 65.5 10.3 117 156-304 23-206 (347)
181 2xdw_A Prolyl endopeptidase; a 96.8 0.02 6.9E-07 68.2 16.8 134 149-308 236-415 (710)
182 3e5z_A Putative gluconolactona 96.7 0.013 4.3E-07 61.3 12.9 132 148-306 28-201 (296)
183 3azo_A Aminopeptidase; POP fam 96.6 0.0075 2.6E-07 70.2 11.4 127 152-306 194-368 (662)
184 2oiz_A Aromatic amine dehydrog 96.6 0.0089 3E-07 65.9 11.1 72 188-289 288-361 (361)
185 2xdw_A Prolyl endopeptidase; a 96.4 0.0078 2.7E-07 71.8 10.3 117 152-307 131-268 (710)
186 1qks_A Cytochrome CD1 nitrite 96.0 0.035 1.2E-06 66.1 12.9 133 158-306 168-372 (567)
187 2bkl_A Prolyl endopeptidase; m 95.9 0.028 9.7E-07 66.9 11.6 93 188-303 149-257 (695)
188 2oiz_A Aromatic amine dehydrog 95.9 0.019 6.4E-07 63.3 8.9 98 188-307 33-140 (361)
189 1rwi_B Serine/threonine-protei 95.8 0.079 2.7E-06 53.8 12.5 129 151-307 111-264 (270)
190 1pjx_A Dfpase, DIISOPROPYLFLUO 95.7 0.14 4.8E-06 53.0 14.5 31 276-306 172-206 (314)
191 3hrp_A Uncharacterized protein 95.7 0.071 2.4E-06 60.2 13.2 134 153-306 136-297 (409)
192 2bkl_A Prolyl endopeptidase; m 95.7 0.031 1.1E-06 66.5 10.7 135 148-307 229-397 (695)
193 1yr2_A Prolyl oligopeptidase; 95.7 0.047 1.6E-06 65.6 12.2 130 152-306 274-440 (741)
194 3iuj_A Prolyl endopeptidase; h 95.4 0.064 2.2E-06 64.2 11.9 132 152-308 135-315 (693)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 95.3 0.16 5.5E-06 52.6 13.1 94 188-307 200-299 (314)
196 3g4e_A Regucalcin; six bladed 95.2 0.2 7E-06 52.9 13.8 134 148-306 13-179 (297)
197 2ece_A 462AA long hypothetical 95.0 0.3 1E-05 57.3 15.5 130 155-307 93-289 (462)
198 1yr2_A Prolyl oligopeptidase; 95.0 0.087 3E-06 63.4 11.3 118 152-308 169-304 (741)
199 2qe8_A Uncharacterized protein 94.9 0.36 1.2E-05 52.2 15.1 133 165-307 76-226 (343)
200 3e5z_A Putative gluconolactona 94.9 0.15 5.1E-06 53.2 11.6 124 152-305 73-244 (296)
201 2ghs_A AGR_C_1268P; regucalcin 94.8 0.42 1.4E-05 51.5 15.0 122 158-306 62-209 (326)
202 2iwa_A Glutamine cyclotransfer 94.8 0.31 1E-05 53.1 13.9 144 147-309 65-239 (266)
203 2ece_A 462AA long hypothetical 94.3 0.21 7E-06 58.7 11.9 106 188-306 230-351 (462)
204 2hz6_A Endoplasmic reticulum t 94.1 0.011 3.8E-07 65.5 0.8 86 153-245 5-112 (369)
205 3hrp_A Uncharacterized protein 94.0 0.85 2.9E-05 51.4 15.7 78 209-306 324-409 (409)
206 3nol_A Glutamine cyclotransfer 94.0 0.84 2.9E-05 49.9 15.1 142 147-307 86-256 (262)
207 1rwi_B Serine/threonine-protei 93.9 0.45 1.5E-05 48.2 12.1 126 151-306 70-221 (270)
208 3no2_A Uncharacterized protein 93.7 0.4 1.4E-05 51.1 11.9 89 188-304 17-105 (276)
209 3mbr_X Glutamine cyclotransfer 93.6 1.5 5E-05 47.5 16.1 145 147-310 64-238 (243)
210 2hz6_A Endoplasmic reticulum t 93.3 0.066 2.2E-06 59.3 5.2 81 154-245 46-150 (369)
211 2dg1_A DRP35, lactonase; beta 93.1 0.29 9.8E-06 51.5 9.5 94 187-305 67-169 (333)
212 3dr2_A Exported gluconolactona 93.0 1.1 3.6E-05 47.5 13.6 32 276-307 188-224 (305)
213 1qks_A Cytochrome CD1 nitrite 92.6 0.58 2E-05 55.7 12.2 92 186-304 177-272 (567)
214 2qe8_A Uncharacterized protein 92.5 0.5 1.7E-05 51.1 10.5 82 208-308 67-155 (343)
215 3iuj_A Prolyl endopeptidase; h 92.0 1.2 4.1E-05 53.4 13.9 126 153-306 241-404 (693)
216 3nok_A Glutaminyl cyclase; bet 91.9 1.4 4.6E-05 48.5 13.0 140 148-306 96-265 (268)
217 2z2n_A Virginiamycin B lyase; 91.6 2.7 9.3E-05 42.6 14.2 127 151-305 102-253 (299)
218 2gop_A Trilobed protease; beta 91.1 0.84 2.9E-05 48.0 10.0 76 186-294 43-122 (347)
219 1npe_A Nidogen, entactin; glyc 90.9 1.7 5.9E-05 44.8 12.1 74 208-306 79-154 (267)
220 2xe4_A Oligopeptidase B; hydro 90.6 2 6.9E-05 52.3 14.2 137 152-307 180-354 (751)
221 3sjl_D Methylamine dehydrogena 90.5 1.2 4.2E-05 50.9 11.4 93 188-300 111-212 (386)
222 2z2n_A Virginiamycin B lyase; 90.4 4.6 0.00016 40.9 14.5 127 151-305 60-211 (299)
223 2mad_H Methylamine dehydrogena 90.0 2 7E-05 47.9 12.5 96 188-304 49-154 (373)
224 1npe_A Nidogen, entactin; glyc 89.3 5.2 0.00018 41.2 14.1 31 276-306 167-197 (267)
225 1ijq_A LDL receptor, low-densi 89.1 4.4 0.00015 43.7 13.9 73 209-306 78-151 (316)
226 2qc5_A Streptogramin B lactona 88.2 7.9 0.00027 39.2 14.3 89 188-305 85-174 (300)
227 1xip_A Nucleoporin NUP159; bet 88.1 3.4 0.00012 47.2 12.8 104 150-287 40-174 (388)
228 2qc5_A Streptogramin B lactona 87.8 8.2 0.00028 39.1 14.2 127 151-305 107-258 (300)
229 3v65_B Low-density lipoprotein 87.1 5.3 0.00018 44.6 13.4 31 276-306 202-233 (386)
230 3v64_C Agrin; beta propeller, 86.9 6 0.00021 43.5 13.5 30 277-306 160-190 (349)
231 3tc9_A Hypothetical hydrolase; 86.9 3.9 0.00013 46.5 12.3 31 277-307 271-301 (430)
232 3nok_A Glutaminyl cyclase; bet 86.8 3.7 0.00013 45.1 11.5 141 138-307 46-210 (268)
233 2fp8_A Strictosidine synthase; 86.4 6.2 0.00021 41.9 12.8 30 277-306 186-215 (322)
234 4gq2_M Nucleoporin NUP120; bet 86.1 12 0.00041 47.3 17.2 95 150-266 174-276 (950)
235 4fhn_B Nucleoporin NUP120; pro 85.4 3.8 0.00013 52.6 12.4 42 1032-1073 945-994 (1139)
236 3sjl_D Methylamine dehydrogena 85.1 2.9 9.7E-05 47.9 10.0 98 188-307 61-169 (386)
237 3g4e_A Regucalcin; six bladed 85.0 6.5 0.00022 41.3 12.1 79 209-306 150-228 (297)
238 3s84_A Apolipoprotein A-IV; fo 81.6 67 0.0023 35.2 23.0 34 783-816 58-91 (273)
239 3sre_A PON1, serum paraoxonase 81.4 14 0.00049 41.6 13.7 122 165-307 123-252 (355)
240 1mda_H Methylamine dehydrogena 80.9 4.4 0.00015 45.7 9.3 98 187-306 47-155 (368)
241 2mad_H Methylamine dehydrogena 80.4 26 0.0009 38.9 15.3 53 234-307 297-350 (373)
242 3mbr_X Glutamine cyclotransfer 80.4 20 0.00069 38.6 13.7 148 131-307 5-179 (243)
243 3q7m_A Lipoprotein YFGL, BAMB; 80.0 19 0.00066 38.6 13.7 92 150-245 96-208 (376)
244 1kb0_A Quinohemoprotein alcoho 79.7 17 0.00058 43.9 14.4 26 154-179 321-350 (677)
245 3v64_C Agrin; beta propeller, 79.3 17 0.00059 39.8 13.2 31 276-306 203-233 (349)
246 3q7m_A Lipoprotein YFGL, BAMB; 79.0 18 0.00062 38.9 13.0 82 156-245 238-338 (376)
247 3v65_B Low-density lipoprotein 78.6 20 0.00069 39.9 13.6 30 277-306 247-276 (386)
248 3amr_A 3-phytase; beta-propell 77.7 62 0.0021 36.9 17.2 107 185-309 98-212 (355)
249 3m0c_C LDL receptor, low-densi 77.3 16 0.00056 45.3 13.5 134 151-310 474-635 (791)
250 3s84_A Apolipoprotein A-IV; fo 76.9 92 0.0031 34.1 24.9 21 939-959 202-222 (273)
251 3nol_A Glutamine cyclotransfer 76.4 30 0.001 37.8 13.7 141 138-307 34-201 (262)
252 1ijq_A LDL receptor, low-densi 75.4 37 0.0013 36.4 14.2 31 276-306 164-194 (316)
253 1fwx_A Nitrous oxide reductase 75.3 2.1 7.1E-05 51.9 4.7 138 140-297 271-409 (595)
254 2p4o_A Hypothetical protein; p 73.9 66 0.0023 33.9 15.5 24 284-307 175-198 (306)
255 2iwa_A Glutamine cyclotransfer 73.2 35 0.0012 37.0 13.3 132 152-309 25-183 (266)
256 4hw6_A Hypothetical protein, I 72.9 41 0.0014 38.3 14.5 27 280-306 277-303 (433)
257 1deq_A Fibrinogen (alpha chain 70.7 75 0.0026 36.6 15.4 6 744-749 54-59 (390)
258 3p5b_L Low density lipoprotein 70.4 37 0.0013 38.1 13.1 29 278-306 204-233 (400)
259 1yiq_A Quinohemoprotein alcoho 70.3 17 0.00058 43.9 11.1 23 154-176 313-338 (689)
260 2ghs_A AGR_C_1268P; regucalcin 69.5 33 0.0011 36.7 12.0 104 165-304 59-167 (326)
261 3c75_H MADH, methylamine dehyd 69.4 8.7 0.0003 44.4 7.9 98 188-306 101-208 (426)
262 3f7f_A Nucleoporin NUP120; nuc 69.2 10 0.00035 47.0 8.7 91 149-265 163-259 (729)
263 3sov_A LRP-6, low-density lipo 68.6 23 0.00079 38.6 10.7 30 277-306 123-153 (318)
264 3p5b_L Low density lipoprotein 68.5 58 0.002 36.5 14.2 31 276-306 246-276 (400)
265 3m0c_C LDL receptor, low-densi 68.2 53 0.0018 40.9 14.9 31 276-306 558-588 (791)
266 2a01_A Apolipoprotein A-I; fou 66.4 32 0.0011 36.8 11.1 11 757-767 37-47 (243)
267 1n7d_A LDL receptor, low-densi 65.4 16 0.00054 44.5 9.4 31 276-306 540-570 (699)
268 3tc9_A Hypothetical hydrolase; 64.9 27 0.00094 39.6 10.8 138 132-306 106-256 (430)
269 3ghg_A Fibrinogen alpha chain; 64.8 1.2E+02 0.0039 36.5 15.8 11 888-898 149-159 (562)
270 1yiq_A Quinohemoprotein alcoho 64.4 35 0.0012 41.3 12.1 56 188-245 133-193 (689)
271 1n7d_A LDL receptor, low-densi 62.7 7.2 0.00025 47.4 5.8 28 279-306 499-527 (699)
272 1fwx_A Nitrous oxide reductase 61.8 42 0.0014 40.7 11.9 131 156-307 205-361 (595)
273 1kv9_A Type II quinohemoprotei 60.7 37 0.0013 40.8 11.4 27 153-179 307-337 (668)
274 3q6k_A 43.2 kDa salivary prote 57.9 86 0.0029 35.9 13.1 99 258-358 136-261 (381)
275 3f7f_A Nucleoporin NUP120; nuc 57.7 1E+02 0.0035 38.3 14.4 21 156-176 230-250 (729)
276 1kv9_A Type II quinohemoprotei 56.2 86 0.0029 37.7 13.4 19 277-295 231-249 (668)
277 3sov_A LRP-6, low-density lipo 52.6 1.5E+02 0.0053 32.1 13.6 31 276-306 166-196 (318)
278 4hw6_A Hypothetical protein, I 51.0 1.3E+02 0.0043 34.3 13.1 112 158-306 142-258 (433)
279 3kya_A Putative phosphatase; s 50.9 1.1E+02 0.0038 36.2 12.9 29 279-307 313-341 (496)
280 1mda_H Methylamine dehydrogena 49.8 20 0.00069 40.4 6.3 51 236-307 295-346 (368)
281 3hxj_A Pyrrolo-quinoline quino 47.6 1.2E+02 0.0042 31.1 11.4 25 277-303 216-240 (330)
282 2ad6_A Methanol dehydrogenase 45.6 67 0.0023 37.9 10.0 21 156-176 312-335 (571)
283 3c75_H MADH, methylamine dehyd 45.3 53 0.0018 37.9 8.9 53 234-307 349-402 (426)
284 3hxj_A Pyrrolo-quinoline quino 44.6 1.4E+02 0.0048 30.7 11.2 83 188-304 119-201 (330)
285 3l1n_A MP1P, cell WALL antigen 43.9 1.8E+02 0.006 30.5 11.7 40 908-947 155-194 (194)
286 3dr2_A Exported gluconolactona 43.4 97 0.0033 32.3 9.9 79 198-305 36-114 (305)
287 2cly_A ATP synthase B chain, m 40.1 1.7E+02 0.0059 31.2 11.1 41 760-804 72-112 (214)
288 1kb0_A Quinohemoprotein alcoho 38.6 1.4E+02 0.0046 36.1 11.4 53 188-245 140-200 (677)
289 2xe4_A Oligopeptidase B; hydro 38.5 66 0.0022 39.1 8.7 113 165-308 184-305 (751)
290 4a0p_A LRP6, LRP-6, low-densit 38.3 2.8E+02 0.0097 33.2 14.0 29 278-306 125-154 (628)
291 3sbq_A Nitrous-oxide reductase 35.1 1.8E+02 0.0062 35.6 11.4 137 136-295 313-454 (638)
292 4a0p_A LRP6, LRP-6, low-densit 33.9 4.1E+02 0.014 31.8 14.5 31 276-306 166-196 (628)
293 2xzh_A Clathrin heavy chain 1; 33.4 5.6E+02 0.019 29.4 14.4 116 166-307 179-332 (365)
294 2p4o_A Hypothetical protein; p 32.3 4.5E+02 0.016 27.4 14.5 31 276-307 117-147 (306)
295 1k3i_A Galactose oxidase precu 32.3 78 0.0027 37.6 7.8 82 188-294 221-305 (656)
296 3s94_A LRP-6, low-density lipo 31.8 5.3E+02 0.018 30.8 14.9 31 276-306 479-509 (619)
297 1k3i_A Galactose oxidase precu 30.7 88 0.003 37.1 7.9 85 156-245 197-324 (656)
298 3s94_A LRP-6, low-density lipo 30.5 2.6E+02 0.0088 33.5 11.9 74 208-306 84-158 (619)
299 3vkg_A Dynein heavy chain, cyt 28.5 1.6E+03 0.056 32.7 28.7 16 735-750 1862-1877(3245)
300 2l7b_A Apolipoprotein E, APO-E 28.2 2.1E+02 0.0071 31.9 9.8 31 756-786 84-117 (307)
301 3sre_A PON1, serum paraoxonase 27.9 2.1E+02 0.0072 32.2 9.9 55 224-293 128-182 (355)
302 3oja_B Anopheles plasmodium-re 27.1 7.9E+02 0.027 28.5 15.1 7 169-175 77-83 (597)
303 1w6s_A Methanol dehydrogenase 26.6 3.7E+02 0.013 32.2 12.3 57 116-176 279-342 (599)
304 1u2m_A Histone-like protein HL 26.2 29 0.00099 33.8 2.3 31 791-821 67-97 (143)
305 1bpo_A Protein (clathrin); cla 26.1 6E+02 0.021 30.3 13.4 125 166-321 178-340 (494)
306 1flg_A Protein (quinoprotein e 25.5 2.2E+02 0.0076 33.7 10.0 19 158-176 337-355 (582)
307 4gq2_M Nucleoporin NUP120; bet 25.1 4.7E+02 0.016 33.1 13.3 21 156-176 246-266 (950)
308 3mq9_A Bone marrow stromal ant 24.2 4.2E+02 0.014 30.2 11.7 93 903-997 351-465 (471)
309 3ghg_A Fibrinogen alpha chain; 21.2 4.3E+02 0.015 31.8 10.9 6 743-748 50-55 (562)
310 3s25_A Hypothetical 7-bladed b 21.2 6.3E+02 0.021 27.3 11.9 36 150-185 108-147 (302)
311 2l7b_A Apolipoprotein E, APO-E 21.2 7E+02 0.024 27.7 12.3 32 743-777 40-71 (307)
312 3kya_A Putative phosphatase; s 21.1 3.4E+02 0.012 32.0 10.4 28 279-306 250-277 (496)
313 3iv1_A Tumor susceptibility ge 20.8 3.5E+02 0.012 24.8 7.9 59 936-994 8-72 (78)
314 4ani_A Protein GRPE; chaperone 20.8 3E+02 0.01 29.4 8.8 44 788-839 84-127 (213)
315 1deq_A Fibrinogen (alpha chain 20.2 4.6E+02 0.016 30.3 10.6 6 921-926 217-222 (390)
No 1
>2vxg_A LD41624, GE-1, CG6181-PA, isoform A; decapping, EDC4, hedls, mRNA decay, P-BODY, gene regulation; 1.9A {Drosophila melanogaster}
Probab=100.00 E-value=3.1e-36 Score=299.40 Aligned_cols=137 Identities=27% Similarity=0.415 Sum_probs=121.7
Q ss_pred CcHHHHHHhhccCcHHHHHHHHHhcCCHHHHHHHhhccCcccccccCCCCcchhHHHHHHHHHhhhcccChHHHHHHHHH
Q 001070 1027 DPTKELSRLVSDRKYEEAFTTALQRSDVSIVSWLCSQVDMHGLLSMVPLPLSQGVLLSLLQQLACDINKDTARKLAWLTD 1106 (1165)
Q Consensus 1027 Dp~~eI~qLI~eGqyEEAF~kALqSsDlsLV~~LcsrvDP~~Lfsl~PlpLSQgVLLSLIQQLSsDL~tdt~lKL~WLEe 1106 (1165)
|+.++|.+||++|+|||||++||+++|+++|+|+|+++||++||+..|++|||+|||||+||||+||++++++||+|||+
T Consensus 2 ~~~~~I~~Ll~~g~~eeAf~~aL~ssd~~lv~~lc~~~dp~~~~~~~~~~Lsq~vLLSLiqqls~dL~~~~~~Kl~WLe~ 81 (139)
T 2vxg_A 2 AMGDSIKQLLMAGQINKAFHQALLANDLGLVEFTLRHTDSNQAFAPEGCRLEQKVLLSLIQQISADMTNHNELKQRYLNE 81 (139)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHSCHHHHTC----CCCHHHHHHHHHHHHHCCTTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHCCCHHHHHHHHHHhCcHHHHHHHHHcCCHHHhcCCCCCCccHHHHHHHHHHHHHHhccCcHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred HHHHcCCCCchhHHhHHHHHHHHHHHHHhhh-cCCCCccccchhHHHHHHHHHHHhhhcC
Q 001070 1107 VAAAINPADPMIAVHARPIFEQVYQRLHHQR-SSPTISGAELSSIRLLIHVINSMLMTFK 1165 (1165)
Q Consensus 1107 al~aLDpsDP~IrehvPkIL~~L~qrL~~~~-slp~~s~~d~~~lRLl~hvinslL~s~k 1165 (1165)
|+++||++||+||+|+|+||++|++||++++ +.|. ....++||+|+|+||+|++..|
T Consensus 82 vl~aid~~dp~i~~~~p~Il~~l~~~L~~~~~~~p~--~~~~~~i~~l~~~~~~l~~~~~ 139 (139)
T 2vxg_A 82 ALLAINMADPITREHAPKVLTELYRNCQQFIKNSPK--NSQFSNVRLLMKAIITYRDQLK 139 (139)
T ss_dssp HHHHCCTTSHHHHHHHHHHHHHHHHHHHHHHHHCTT--STTHHHHHHHHHHHHHHC----
T ss_pred HHHHcCCCCchHHHHHHHHHHHHHHHHHHHHhcCCC--ChHHhHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999854 4443 3666999999999999998765
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.44 E-value=9e-13 Score=139.68 Aligned_cols=128 Identities=18% Similarity=0.276 Sum_probs=100.4
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCC
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQP 209 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~s 209 (1165)
+..||+||++|..||.|||||+.+ .....|.+|+. |||||..+|.++..+++|. ..
T Consensus 21 fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~-~~ 99 (304)
T 2ynn_A 21 FHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP-DY 99 (304)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCS-SC
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCC-Cc
Confidence 344799999999999999999998 44557788876 9999999999999999985 48
Q ss_pred cceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcE
Q 001070 210 VNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGL 289 (1165)
Q Consensus 210 V~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ 289 (1165)
|++++| .|++ .+|+ +|+.|++|||||+..+ +.|.+++. +|...+..++++|..+.
T Consensus 100 v~~~~~--~~~~---~~l~-sgs~D~~v~lWd~~~~-----------~~~~~~~~--------~h~~~v~~v~~~p~~~~ 154 (304)
T 2ynn_A 100 IRSIAV--HPTK---PYVL-SGSDDLTVKLWNWENN-----------WALEQTFE--------GHEHFVMCVAFNPKDPS 154 (304)
T ss_dssp EEEEEE--CSSS---SEEE-EEETTSCEEEEEGGGT-----------TEEEEEEC--------CCCSCEEEEEECTTCTT
T ss_pred EEEEEE--cCCC---CEEE-EECCCCeEEEEECCCC-----------cchhhhhc--------ccCCcEEEEEECCCCCC
Confidence 999999 4554 4355 6899999999998543 47888888 47888999999996544
Q ss_pred EEEeccCCCcEEEEEee
Q 001070 290 LLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 290 ilLan~~r~aIYalhl~ 306 (1165)
+|++-..-..|+...+.
T Consensus 155 ~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 155 TFASGCLDRTVKVWSLG 171 (304)
T ss_dssp EEEEEETTSEEEEEETT
T ss_pred EEEEEeCCCeEEEEECC
Confidence 44444444566666554
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.43 E-value=4e-13 Score=147.27 Aligned_cols=129 Identities=18% Similarity=0.222 Sum_probs=101.7
Q ss_pred Eeee--cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc-----------------------EEEeecCCCceeEEecCC
Q 001070 152 QIAV--NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK-----------------------IKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 152 ~IAV--n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q-----------------------VriWD~~~g~pl~~leph 205 (1165)
.++. ||+||++|..||.|||||+.+ .....|+||+. |||||.+++.++..+..+
T Consensus 132 ~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 211 (344)
T 4gqb_B 132 TVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS 211 (344)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC--
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecc
Confidence 3444 799999999999999999998 66678999988 999999999998888644
Q ss_pred -CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEee
Q 001070 206 -GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVL 284 (1165)
Q Consensus 206 -dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~ 284 (1165)
.|..|.+++| .|++.. ++++|+.|++|+|||+.. ++|+++|.+ |..-++.|+++
T Consensus 212 ~~~~~~~~~~~--~p~~~~---~l~sg~~dg~v~~wd~~~------------~~~~~~~~~--------h~~~v~~v~fs 266 (344)
T 4gqb_B 212 APGYLPTSLAW--HPQQSE---VFVFGDENGTVSLVDTKS------------TSCVLSSAV--------HSQCVTGLVFS 266 (344)
T ss_dssp --CCCEEEEEE--CSSCTT---EEEEEETTSEEEEEESCC--------------CCEEEEC--------CSSCEEEEEEC
T ss_pred eeeccceeeee--cCCCCc---ceEEeccCCcEEEEECCC------------CcEEEEEcC--------CCCCEEEEEEc
Confidence 4668999999 465544 566799999999999844 489999985 67788899999
Q ss_pred cCCcEEEEeccCCCcEEEEEe
Q 001070 285 SQAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 285 p~a~~ilLan~~r~aIYalhl 305 (1165)
|++..+|++-..-..|+...+
T Consensus 267 p~g~~~lasgs~D~~i~vwd~ 287 (344)
T 4gqb_B 267 PHSVPFLASLSEDCSLAVLDS 287 (344)
T ss_dssp SSSSCCEEEEETTSCEEEECT
T ss_pred cCCCeEEEEEeCCCeEEEEEC
Confidence 999765555555566776644
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.38 E-value=1.6e-12 Score=139.86 Aligned_cols=116 Identities=18% Similarity=0.303 Sum_probs=97.8
Q ss_pred ecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCCcc
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQPVN 211 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~sV~ 211 (1165)
.||+||++|..||.|||||+.+ .....|+||.. |||||.+++.++.++.+|. ..|.
T Consensus 174 pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~-~~v~ 252 (321)
T 3ow8_A 174 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA-SWVL 252 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCS-SCEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCC-CceE
Confidence 3799999999999999999998 66668899987 9999999999999999885 4899
Q ss_pred eeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEE
Q 001070 212 SAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLL 291 (1165)
Q Consensus 212 SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~il 291 (1165)
+++| .|++ .+|+ +|+.|++|||||+.. ++|+++|.. |...+..|+++|++.+|+
T Consensus 253 ~~~~--sp~~---~~l~-s~s~D~~v~iwd~~~------------~~~~~~~~~--------h~~~v~~v~~s~~g~~l~ 306 (321)
T 3ow8_A 253 NVAF--CPDD---THFV-SSSSDKSVKVWDVGT------------RTCVHTFFD--------HQDQVWGVKYNGNGSKIV 306 (321)
T ss_dssp EEEE--CTTS---SEEE-EEETTSCEEEEETTT------------TEEEEEECC--------CSSCEEEEEECTTSSEEE
T ss_pred EEEE--CCCC---CEEE-EEeCCCcEEEEeCCC------------CEEEEEEcC--------CCCcEEEEEECCCCCEEE
Confidence 9999 4554 4455 688999999999844 499999984 677888999999999887
Q ss_pred EeccCC
Q 001070 292 FANAKK 297 (1165)
Q Consensus 292 Lan~~r 297 (1165)
-+...+
T Consensus 307 s~~~d~ 312 (321)
T 3ow8_A 307 SVGDDQ 312 (321)
T ss_dssp EEETTC
T ss_pred EEeCCC
Confidence 766543
No 5
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.35 E-value=6.6e-12 Score=134.24 Aligned_cols=161 Identities=19% Similarity=0.247 Sum_probs=113.9
Q ss_pred cCceEEEeecCCcEEEEeCcchhhHhhcCCcc----------------------------EEEeecCCCceeEEecCCCC
Q 001070 156 NKHYVCYGLKGGNVRVLNLNTATRSLLRGHTK----------------------------IKIWEDSKVAPLIILKPHGG 207 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t~ir~llrGH~q----------------------------VriWD~~~g~pl~~lephdG 207 (1165)
++++|++|..||.|||||+.......+.||.. ||+||.+++..+..+.+|.
T Consensus 118 ~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~- 196 (319)
T 3frx_A 118 KASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHN- 196 (319)
T ss_dssp TSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCC-
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCC-
Confidence 68999999999999999998755556777764 9999999998899999985
Q ss_pred CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCC
Q 001070 208 QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQA 287 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a 287 (1165)
..|++++| .|++ .+|+ +|+.|++|+|||+..+ +|+.++.. + .-+..++++|++
T Consensus 197 ~~v~~~~~--sp~g---~~l~-s~~~dg~i~iwd~~~~------------~~~~~~~~--------~-~~v~~~~~sp~~ 249 (319)
T 3frx_A 197 SNINTLTA--SPDG---TLIA-SAGKDGEIMLWNLAAK------------KAMYTLSA--------Q-DEVFSLAFSPNR 249 (319)
T ss_dssp SCEEEEEE--CTTS---SEEE-EEETTCEEEEEETTTT------------EEEEEEEC--------C-SCEEEEEECSSS
T ss_pred CcEEEEEE--cCCC---CEEE-EEeCCCeEEEEECCCC------------cEEEEecC--------C-CcEEEEEEcCCC
Confidence 48999999 4544 5355 6889999999998544 89999984 2 346699999999
Q ss_pred cEEEEeccCCCcEEEEEeecCCCcccccccccccc-----ccccceeeeeeccCC------CCcceEEEEEeeh
Q 001070 288 GLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEF-----TVTMPVLSFTGTIDP------PSEHIIKLYCVQT 350 (1165)
Q Consensus 288 ~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF-----~v~~PILSft~~~d~------~ge~~vq~yCvQt 350 (1165)
.+|..+.... |++..+..+.- ..++-.+| .....++++.-..|+ ...+.|++|-+.|
T Consensus 250 ~~la~~~~~~--i~v~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 250 YWLAAATATG--IKVFSLDPQYL----VDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp SEEEEEETTE--EEEEEETTEEE----EEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred CEEEEEcCCC--cEEEEeCcCee----eeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 9998887654 55544432110 00000111 112345555554444 2345799998876
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.35 E-value=2.8e-12 Score=142.35 Aligned_cols=122 Identities=17% Similarity=0.315 Sum_probs=100.9
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCCcce
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQPVNS 212 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~sV~S 212 (1165)
++++|++|..||.|||||+.+ .....|+||+. |||||..++.++.++.+|+ +.|++
T Consensus 119 ~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~-~~V~~ 197 (410)
T 1vyh_C 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSS 197 (410)
T ss_dssp SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCS-SCEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC-CCEEE
Confidence 689999999999999999998 77778999987 9999999999999999985 48999
Q ss_pred eEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEE
Q 001070 213 AQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLF 292 (1165)
Q Consensus 213 VaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilL 292 (1165)
|+|. |++ .+|+ +|+.|++|+|||+..+ .|+.+|.+ |...+..+.++|++.+|+.
T Consensus 198 v~~~--p~~---~~l~-s~s~D~~i~~wd~~~~------------~~~~~~~~--------h~~~v~~~~~~~~g~~l~s 251 (410)
T 1vyh_C 198 VSIM--PNG---DHIV-SASRDKTIKMWEVQTG------------YCVKTFTG--------HREWVRMVRPNQDGTLIAS 251 (410)
T ss_dssp EEEC--SSS---SEEE-EEETTSEEEEEETTTC------------CEEEEEEC--------CSSCEEEEEECTTSSEEEE
T ss_pred EEEe--CCC---CEEE-EEeCCCeEEEEECCCC------------cEEEEEeC--------CCccEEEEEECCCCCEEEE
Confidence 9994 544 4455 6889999999998544 89999984 6788889999999998877
Q ss_pred eccCCCcEEEEEe
Q 001070 293 ANAKKNAIYSVHL 305 (1165)
Q Consensus 293 an~~r~aIYalhl 305 (1165)
+... ..|+...+
T Consensus 252 ~s~D-~~v~vwd~ 263 (410)
T 1vyh_C 252 CSND-QTVRVWVV 263 (410)
T ss_dssp EETT-SCEEEEET
T ss_pred EcCC-CeEEEEEC
Confidence 6654 34444443
No 7
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.34 E-value=2e-11 Score=133.21 Aligned_cols=173 Identities=15% Similarity=0.166 Sum_probs=131.5
Q ss_pred cC-ceEEEeecCCcEEEEeCcc-hhhHhh--cCCcc----------------------EEEeecCCCceeEEe-cCCCCC
Q 001070 156 NK-HYVCYGLKGGNVRVLNLNT-ATRSLL--RGHTK----------------------IKIWEDSKVAPLIIL-KPHGGQ 208 (1165)
Q Consensus 156 n~-~yIayG~kdg~IRVwdi~t-~ir~ll--rGH~q----------------------VriWD~~~g~pl~~l-ephdG~ 208 (1165)
+| ++|++|..||.|+|||+.+ .....+ .+|.. |+|||.+++.++..+ .+|.|.
T Consensus 142 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 221 (402)
T 2aq5_A 142 TAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGT 221 (402)
T ss_dssp SBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSS
T ss_pred CCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCC
Confidence 45 6999999999999999998 555566 78887 999999999999999 788887
Q ss_pred CcceeEeecCCCCCCceEEEeec---CCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeec
Q 001070 209 PVNSAQYLTAPNQAGHIILVTAG---PLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS 285 (1165)
Q Consensus 209 sV~SVaFl~aP~~~d~~~lvtsG---slnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p 285 (1165)
.+.+++|. | ++.+|++ | +.|++|+|||+...+ .++.++.+ .+..-+..++++|
T Consensus 222 ~~~~~~~~--~---~~~~l~~-g~~~~~d~~i~iwd~~~~~-----------~~~~~~~~-------~~~~~v~~~~~s~ 277 (402)
T 2aq5_A 222 RPVHAVFV--S---EGKILTT-GFSRMSERQVALWDTKHLE-----------EPLSLQEL-------DTSSGVLLPFFDP 277 (402)
T ss_dssp SCCEEEEC--S---TTEEEEE-EECTTCCEEEEEEETTBCS-----------SCSEEEEC-------CCCSSCEEEEEET
T ss_pred cceEEEEc--C---CCcEEEE-eccCCCCceEEEEcCcccc-----------CCceEEec-------cCCCceeEEEEcC
Confidence 89999994 4 4565554 5 799999999985542 12333333 1334566889999
Q ss_pred CCcEEEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC----CCcceEEEEEeehhhhhhh
Q 001070 286 QAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP----PSEHIIKLYCVQTQAIQQY 356 (1165)
Q Consensus 286 ~a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~----~ge~~vq~yCvQtqAIQqy 356 (1165)
++++|+++......|+...+..+.. .+..+..|.-..+|.++....+. .+.+.+++|.+.+..++..
T Consensus 278 ~~~~l~~~g~~dg~i~i~d~~~~~~----~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~~~~~~i 348 (402)
T 2aq5_A 278 DTNIVYLCGKGDSSIRYFEITSEAP----FLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERKCEPI 348 (402)
T ss_dssp TTTEEEEEETTCSCEEEEEECSSTT----CEEEEEEECCSSCCSEEEECCGGGSCGGGTEEEEEEEEETTEEEEE
T ss_pred CCCEEEEEEcCCCeEEEEEecCCCc----ceEeecccccCCcccceEEecccccceecceeEEEEEcCCCcEEEE
Confidence 9999999887788999998875432 36677777777888888776655 2444899999998766544
No 8
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.33 E-value=2e-11 Score=131.32 Aligned_cols=173 Identities=16% Similarity=0.267 Sum_probs=113.1
Q ss_pred cCceEEEeecCCcEEEEeCcch--------hhHhhcCCcc----------------------EEEeecCCCceeEEecCC
Q 001070 156 NKHYVCYGLKGGNVRVLNLNTA--------TRSLLRGHTK----------------------IKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t~--------ir~llrGH~q----------------------VriWD~~~g~pl~~leph 205 (1165)
|+++|++|..||.|||||+.+. ....|+||.. |||||.+++.++.++.+|
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 7889999999999999999751 2346889987 999999999999999999
Q ss_pred CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCC---CCCC---------------------------
Q 001070 206 GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLP---THAE--------------------------- 255 (1165)
Q Consensus 206 dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~---~~~~--------------------------- 255 (1165)
. ..|++|+| .|++ .+|+ +|+.|++|+|||+......... ....
T Consensus 118 ~-~~v~~v~~--sp~~---~~l~-s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~ 190 (343)
T 2xzm_R 118 Q-SEVYSVAF--SPDN---RQIL-SAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASV 190 (343)
T ss_dssp C-SCEEEEEE--CSST---TEEE-EEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEE
T ss_pred C-CcEEEEEE--CCCC---CEEE-EEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEE
Confidence 5 48999999 4554 4455 5779999999998532110000 0000
Q ss_pred -----------CcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeecCCCcccccccccccccc
Q 001070 256 -----------SWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTV 324 (1165)
Q Consensus 256 -----------~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v 324 (1165)
.+.|..++. +|...++.++++|++.+|+.+... ..|+...+...... +..|..
T Consensus 191 ~~d~~i~iwd~~~~~~~~~~--------~h~~~v~~~~~s~~g~~l~sgs~d-g~v~iwd~~~~~~~-------~~~~~~ 254 (343)
T 2xzm_R 191 GWDGRLKVWNTNFQIRYTFK--------AHESNVNHLSISPNGKYIATGGKD-KKLLIWDILNLTYP-------QREFDA 254 (343)
T ss_dssp ETTSEEEEEETTTEEEEEEE--------CCSSCEEEEEECTTSSEEEEEETT-CEEEEEESSCCSSC-------SEEEEC
T ss_pred cCCCEEEEEcCCCceeEEEc--------CccccceEEEECCCCCEEEEEcCC-CeEEEEECCCCccc-------ceeecC
Confidence 011222332 467778899999999988777654 45666665321111 122333
Q ss_pred ccceeeeeeccCC-----CCcceEEEEEeehh
Q 001070 325 TMPVLSFTGTIDP-----PSEHIIKLYCVQTQ 351 (1165)
Q Consensus 325 ~~PILSft~~~d~-----~ge~~vq~yCvQtq 351 (1165)
..+|.++....+. ...+.|++|.+.+.
T Consensus 255 ~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~ 286 (343)
T 2xzm_R 255 GSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQ 286 (343)
T ss_dssp SSCEEEEEECSSSCEEEEEESSCEEEEESSSC
T ss_pred CCcEEEEEECCCCCEEEEECCCCEEEEEeCCC
Confidence 4455555443333 12235888887664
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.32 E-value=1.7e-11 Score=132.01 Aligned_cols=126 Identities=23% Similarity=0.331 Sum_probs=100.7
Q ss_pred eeecCceEEEeecCCcEEEEeCcch-----hhHhhcCCcc---------------------EEEeecCCCceeEEecCCC
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNTA-----TRSLLRGHTK---------------------IKIWEDSKVAPLIILKPHG 206 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t~-----ir~llrGH~q---------------------VriWD~~~g~pl~~lephd 206 (1165)
+.-||+||++|..||.|||||+.+. +...+.||.. |+|||.+++.++..+++|.
T Consensus 105 ~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~ 184 (340)
T 1got_B 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT 184 (340)
T ss_dssp ECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred ECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCC
Confidence 4447999999999999999999862 3346788875 9999999999999999986
Q ss_pred CCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecC
Q 001070 207 GQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQ 286 (1165)
Q Consensus 207 G~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~ 286 (1165)
| .|++++| .|++ .+++ +|+.|++|||||+.. +.|.++|.. |...++.++++|+
T Consensus 185 ~-~v~~~~~--~~~~---~~l~-sg~~d~~v~~wd~~~------------~~~~~~~~~--------h~~~v~~v~~~p~ 237 (340)
T 1got_B 185 G-DVMSLSL--APDT---RLFV-SGACDASAKLWDVRE------------GMCRQTFTG--------HESDINAICFFPN 237 (340)
T ss_dssp S-CEEEEEE--CTTS---SEEE-EEETTSCEEEEETTT------------CSEEEEECC--------CSSCEEEEEECTT
T ss_pred C-ceEEEEE--CCCC---CEEE-EEeCCCcEEEEECCC------------CeeEEEEcC--------CcCCEEEEEEcCC
Confidence 5 8999999 4544 4344 688999999999844 489999984 6777889999999
Q ss_pred CcEEEEeccCCCcEEEEEee
Q 001070 287 AGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 287 a~~ilLan~~r~aIYalhl~ 306 (1165)
+.+|+.+... ..|+...+.
T Consensus 238 ~~~l~s~s~d-~~v~iwd~~ 256 (340)
T 1got_B 238 GNAFATGSDD-ATCRLFDLR 256 (340)
T ss_dssp SSEEEEEETT-SCEEEEETT
T ss_pred CCEEEEEcCC-CcEEEEECC
Confidence 9988877654 445555443
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.31 E-value=1e-11 Score=135.60 Aligned_cols=167 Identities=13% Similarity=0.138 Sum_probs=116.6
Q ss_pred ecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc-----------------------EEEeecCCCceeEEecCCC-CCC
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK-----------------------IKIWEDSKVAPLIILKPHG-GQP 209 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q-----------------------VriWD~~~g~pl~~lephd-G~s 209 (1165)
-||+||++|..||.|||||+.+ .....|+||+. |||||.+++.++..+..+. ...
T Consensus 149 pdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 228 (357)
T 4g56_B 149 SDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTI 228 (357)
T ss_dssp SSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecccccc
Confidence 3799999999999999999998 66778899987 9999999998877766543 238
Q ss_pred cceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcE
Q 001070 210 VNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGL 289 (1165)
Q Consensus 210 V~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ 289 (1165)
|++|+| .|++.. ++++|+.|.+|+|||+.. ++|+++|.+ |..-+..++++|+++.
T Consensus 229 v~~v~~--sp~~~~---~la~g~~d~~i~~wd~~~------------~~~~~~~~~--------~~~~v~~l~~sp~~~~ 283 (357)
T 4g56_B 229 PTSVTW--HPEKDD---TFACGDETGNVSLVNIKN------------PDSAQTSAV--------HSQNITGLAYSYHSSP 283 (357)
T ss_dssp EEEEEE--CTTSTT---EEEEEESSSCEEEEESSC------------GGGCEEECC--------CSSCEEEEEECSSSSC
T ss_pred ccchhh--hhcccc---eEEEeecccceeEEECCC------------CcEeEEEec--------cceeEEEEEEcCCCCC
Confidence 999999 576654 677799999999999844 489999985 5677889999999876
Q ss_pred EEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeecc-CC------CCcceEEEEEeehhhhh
Q 001070 290 LLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTI-DP------PSEHIIKLYCVQTQAIQ 354 (1165)
Q Consensus 290 ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~-d~------~ge~~vq~yCvQtqAIQ 354 (1165)
+|++-..-..||...+..+. .+..+.-.-+|.++.-.. |+ ...+.|++|-+.+.+-+
T Consensus 284 ~lasgs~D~~i~iwd~~~~~--------~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 284 FLASISEDCTVAVLDADFSE--------VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp CEEEEETTSCEEEECTTSCE--------EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred EEEEEeCCCEEEEEECCCCc--------EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 55555555667776543221 111122234555554331 33 12356888888765433
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.31 E-value=1.1e-11 Score=131.42 Aligned_cols=129 Identities=20% Similarity=0.347 Sum_probs=100.0
Q ss_pred Eeee--cCceEEEeecCCcEEEEeCcc--hhhHhhcCCcc-----------------------EEEeecCCCceeEEecC
Q 001070 152 QIAV--NKHYVCYGLKGGNVRVLNLNT--ATRSLLRGHTK-----------------------IKIWEDSKVAPLIILKP 204 (1165)
Q Consensus 152 ~IAV--n~~yIayG~kdg~IRVwdi~t--~ir~llrGH~q-----------------------VriWD~~~g~pl~~lep 204 (1165)
.|++ +++||++|..||.|||||+.+ .+...|.||+. |||||.+++.+...+..
T Consensus 102 ~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 181 (304)
T 2ynn_A 102 SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT 181 (304)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred EEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceecc
Confidence 3444 689999999999999999987 45568999987 99999998887777765
Q ss_pred CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEee
Q 001070 205 HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVL 284 (1165)
Q Consensus 205 hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~ 284 (1165)
+....|..+.|...|++ .+|+ +|+.|++|||||+.. ++|+.+|++ |..-+..++++
T Consensus 182 ~~~~~v~~~~~~~~~~~---~~l~-s~s~D~~i~iWd~~~------------~~~~~~~~~--------h~~~v~~~~~~ 237 (304)
T 2ynn_A 182 GQERGVNYVDYYPLPDK---PYMI-TASDDLTIKIWDYQT------------KSCVATLEG--------HMSNVSFAVFH 237 (304)
T ss_dssp CCTTCEEEEEECCSTTC---CEEE-EEETTSEEEEEETTT------------TEEEEEEEC--------CSSCEEEEEEC
T ss_pred CCcCcEEEEEEEEcCCC---CEEE-EEcCCCeEEEEeCCC------------CccceeeCC--------CCCCEEEEEEC
Confidence 54568999999533333 4355 688999999999844 489999995 66778899999
Q ss_pred cCCcEEEEeccCCCcEEEEEe
Q 001070 285 SQAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 285 p~a~~ilLan~~r~aIYalhl 305 (1165)
|++.+|+-+... ..|+.--+
T Consensus 238 p~~~~l~s~s~D-g~i~iWd~ 257 (304)
T 2ynn_A 238 PTLPIIISGSED-GTLKIWNS 257 (304)
T ss_dssp SSSSEEEEEETT-SCEEEEET
T ss_pred CCCCEEEEEcCC-CeEEEEEC
Confidence 999977766554 44555443
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.30 E-value=6.8e-12 Score=137.51 Aligned_cols=124 Identities=8% Similarity=0.065 Sum_probs=91.7
Q ss_pred cC-ceEEEeecCCcEEEEeCcc-hhhHhh--cCCcc-----------------------EEEeecCCCceeEEecCCCCC
Q 001070 156 NK-HYVCYGLKGGNVRVLNLNT-ATRSLL--RGHTK-----------------------IKIWEDSKVAPLIILKPHGGQ 208 (1165)
Q Consensus 156 n~-~yIayG~kdg~IRVwdi~t-~ir~ll--rGH~q-----------------------VriWD~~~g~pl~~lephdG~ 208 (1165)
++ .+|++|..||.|||||+.+ .....| .+|.. |||||.+++.++..+++|. .
T Consensus 180 ~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~-~ 258 (344)
T 4gqb_B 180 HKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHS-Q 258 (344)
T ss_dssp SCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCS-S
T ss_pred CCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCC-C
Confidence 34 5789999999999999987 332222 22221 9999999999999999995 5
Q ss_pred CcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCc
Q 001070 209 PVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAG 288 (1165)
Q Consensus 209 sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~ 288 (1165)
.|++|+| +|++.. +|++|+.|++|+|||+..+ +|.. +. +|.+.++.|+++|+++
T Consensus 259 ~v~~v~f--sp~g~~---~lasgs~D~~i~vwd~~~~------------~~~~-~~--------~H~~~V~~v~~sp~~~ 312 (344)
T 4gqb_B 259 CVTGLVF--SPHSVP---FLASLSEDCSLAVLDSSLS------------ELFR-SQ--------AHRDFVRDATWSPLNH 312 (344)
T ss_dssp CEEEEEE--CSSSSC---CEEEEETTSCEEEECTTCC------------EEEE-EC--------CCSSCEEEEEECSSST
T ss_pred CEEEEEE--ccCCCe---EEEEEeCCCeEEEEECCCC------------cEEE-Ec--------CCCCCEEEEEEeCCCC
Confidence 9999999 566543 5667999999999998543 5653 33 5889999999999999
Q ss_pred EEEEeccCCCcEEEEEee
Q 001070 289 LLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 289 ~ilLan~~r~aIYalhl~ 306 (1165)
.||.+...-..|+.-.+.
T Consensus 313 ~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 313 SLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp TEEEEEETTSCEEEEECC
T ss_pred eEEEEEcCCCeEEEEECC
Confidence 888776555666655544
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.29 E-value=1.2e-11 Score=137.32 Aligned_cols=126 Identities=16% Similarity=0.323 Sum_probs=102.7
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCCcce
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQPVNS 212 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~sV~S 212 (1165)
||+||++|..||.|||||+.+ .....|.||.. |||||.+++.++..+.+|. ..|++
T Consensus 203 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~-~~v~~ 281 (410)
T 1vyh_C 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHR-HVVEC 281 (410)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCC-ceEEE
Confidence 789999999999999999998 54557889976 9999999999999999885 59999
Q ss_pred eEeecCCCCC-----------------CceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcccc
Q 001070 213 AQYLTAPNQA-----------------GHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEE 275 (1165)
Q Consensus 213 VaFl~aP~~~-----------------d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~ 275 (1165)
++| .|++. .+.+|+ +|+.|++|+|||+..+ .|+.+|.+ |.
T Consensus 282 ~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~l~-sgs~D~~i~iwd~~~~------------~~~~~~~~--------h~ 338 (410)
T 1vyh_C 282 ISW--APESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDVSTG------------MCLMTLVG--------HD 338 (410)
T ss_dssp EEE--CCSCGGGGGGGCCSCC-------CCEEE-EEETTSEEEEEETTTT------------EEEEEEEC--------CS
T ss_pred EEE--cCcccccchhhhccccccccCCCCCEEE-EEeCCCeEEEEECCCC------------ceEEEEEC--------CC
Confidence 999 45432 145455 6889999999998543 89999984 77
Q ss_pred ccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 276 AFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
..+..|+++|++.+|+-+.. -..|++..+.
T Consensus 339 ~~v~~v~~~~~g~~l~s~s~-D~~i~vwd~~ 368 (410)
T 1vyh_C 339 NWVRGVLFHSGGKFILSCAD-DKTLRVWDYK 368 (410)
T ss_dssp SCEEEEEECSSSSCEEEEET-TTEEEEECCT
T ss_pred CcEEEEEEcCCCCEEEEEeC-CCeEEEEECC
Confidence 88999999999999886654 4567776654
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.29 E-value=1.2e-11 Score=136.06 Aligned_cols=135 Identities=19% Similarity=0.311 Sum_probs=88.7
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCC----------------
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKV---------------- 196 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g---------------- 196 (1165)
||+||++|..||.|||||+.+ .....|+||.. |||||.+++
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~ 213 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVA 213 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEE
Confidence 688889999999999999887 66667888887 666665544
Q ss_pred --------------------------ceeEEe-------cCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEcc
Q 001070 197 --------------------------APLIIL-------KPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASA 243 (1165)
Q Consensus 197 --------------------------~pl~~l-------ephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a 243 (1165)
..+.++ .+| ...|++|+| .|+ +.+|+ +|+.|++|+|||+.
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~--~~~---g~~l~-s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGH-KDSVYSVVF--TRD---GQSVV-SGSLDRSVKLWNLQ 286 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCC-SSCEEEEEE--CTT---SSEEE-EEETTSEEEEEEC-
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCC-CCCEEEEEE--CCC---CCEEE-EEeCCCEEEEEECC
Confidence 333333 223 137888999 344 45455 68899999999997
Q ss_pred CcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 244 SEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 244 ~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
.............+.|..++.+ |.+++..++.+|++.+|+-+... ..||...+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~--------h~~~v~~~~~~~~~~~l~sgs~D-~~v~iwd~~ 340 (393)
T 1erj_A 287 NANNKSDSKTPNSGTCEVTYIG--------HKDFVLSVATTQNDEYILSGSKD-RGVLFWDKK 340 (393)
T ss_dssp --------------CEEEEEEC--------CSSCEEEEEECGGGCEEEEEETT-SEEEEEETT
T ss_pred CCCCcccccCCCCCcceEEEec--------ccCcEEEEEECCCCCEEEEEeCC-CeEEEEECC
Confidence 6532111111234789999984 78899999999999988766544 456666554
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.29 E-value=3e-11 Score=129.18 Aligned_cols=165 Identities=17% Similarity=0.241 Sum_probs=117.9
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCC
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQP 209 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~s 209 (1165)
+..||+||++|..||.|||||+.+ .....|.||.. |||||.+ +.++.++.+|. ..
T Consensus 73 ~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~-~~ 150 (319)
T 3frx_A 73 LTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHN-DW 150 (319)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCS-SC
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccC-Cc
Confidence 444799999999999999999998 55668899987 9999997 55688998885 48
Q ss_pred cceeEeecCCCCC---CceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecC
Q 001070 210 VNSAQYLTAPNQA---GHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQ 286 (1165)
Q Consensus 210 V~SVaFl~aP~~~---d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~ 286 (1165)
|.+++|. |+.. +.. ++.+|+.|++|++||+.. +.|..++.+ |...++.++++|+
T Consensus 151 v~~~~~~--~~~~~~~~~~-~l~s~~~d~~i~~wd~~~------------~~~~~~~~~--------h~~~v~~~~~sp~ 207 (319)
T 3frx_A 151 VSQVRVV--PNEKADDDSV-TIISAGNDKMVKAWNLNQ------------FQIEADFIG--------HNSNINTLTASPD 207 (319)
T ss_dssp EEEEEEC--CC------CC-EEEEEETTSCEEEEETTT------------TEEEEEECC--------CCSCEEEEEECTT
T ss_pred EEEEEEc--cCCCCCCCcc-EEEEEeCCCEEEEEECCc------------chhheeecC--------CCCcEEEEEEcCC
Confidence 9999995 5432 344 444688999999999843 478888874 7788899999999
Q ss_pred CcEEEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC-----CCcceEEEEEeehh
Q 001070 287 AGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP-----PSEHIIKLYCVQTQ 351 (1165)
Q Consensus 287 a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~-----~ge~~vq~yCvQtq 351 (1165)
+.+|+.+... ..|+...+..+ ..+..|....+|.++....+. .+...+++|-+.++
T Consensus 208 g~~l~s~~~d-g~i~iwd~~~~--------~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~ 268 (319)
T 3frx_A 208 GTLIASAGKD-GEIMLWNLAAK--------KAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQ 268 (319)
T ss_dssp SSEEEEEETT-CEEEEEETTTT--------EEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTE
T ss_pred CCEEEEEeCC-CeEEEEECCCC--------cEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcC
Confidence 9988877654 45666554421 123334445566666555444 11234777766554
No 16
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.28 E-value=1.5e-11 Score=131.53 Aligned_cols=175 Identities=11% Similarity=0.080 Sum_probs=115.9
Q ss_pred eeecCceEEEeecCCcEEEEeCcc---hhhHhhcCCcc----------------------EEEeecCCCc---eeEEecC
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT---ATRSLLRGHTK----------------------IKIWEDSKVA---PLIILKP 204 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t---~ir~llrGH~q----------------------VriWD~~~g~---pl~~lep 204 (1165)
+.-||+||++|..||.|||||+.+ .....|+||+. |+|||..++. ++..+..
T Consensus 19 ~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~ 98 (377)
T 3dwl_C 19 FNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLR 98 (377)
T ss_dssp ECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCC
T ss_pred ECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecc
Confidence 334699999999999999999997 45668999988 9999999887 7888888
Q ss_pred CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEee
Q 001070 205 HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVL 284 (1165)
Q Consensus 205 hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~ 284 (1165)
|. ..|++++| .|++ .+|+ +|+.|++|+||++..+. .|.|.+++.. .|...+..++++
T Consensus 99 ~~-~~v~~~~~--~~~~---~~l~-~~~~d~~i~iwd~~~~~---------~~~~~~~~~~-------~h~~~v~~~~~~ 155 (377)
T 3dwl_C 99 LN-RAATFVRW--SPNE---DKFA-VGSGARVISVCYFEQEN---------DWWVSKHLKR-------PLRSTILSLDWH 155 (377)
T ss_dssp CS-SCEEEEEC--CTTS---SCCE-EEESSSCEEECCC--------------CCCCEEECS-------SCCSCEEEEEEC
T ss_pred cC-CceEEEEE--CCCC---CEEE-EEecCCeEEEEEECCcc---------cceeeeEeec-------ccCCCeEEEEEc
Confidence 85 48999999 4554 4355 57789999999997663 4578888884 267888899999
Q ss_pred cCCcEEEEeccCCCcEEEEEeecCCCccc----------cccccccccccccceeeeeeccCC------CCcceEEEEEe
Q 001070 285 SQAGLLLFANAKKNAIYSVHLGYGNNSAA----------TRIDYIAEFTVTMPVLSFTGTIDP------PSEHIIKLYCV 348 (1165)
Q Consensus 285 p~a~~ilLan~~r~aIYalhl~~g~~~~~----------~r~dyiaeF~v~~PILSft~~~d~------~ge~~vq~yCv 348 (1165)
|++.+|+.+... ..|+...+..+..... ..-..+.+|.-..+|.++....++ ...+.|++|-+
T Consensus 156 ~~~~~l~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~ 234 (377)
T 3dwl_C 156 PNNVLLAAGCAD-RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYP 234 (377)
T ss_dssp TTSSEEEEEESS-SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEE
T ss_pred CCCCEEEEEeCC-CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 999988877665 5677777643221110 112334444444456665554444 23356777777
Q ss_pred ehh
Q 001070 349 QTQ 351 (1165)
Q Consensus 349 Qtq 351 (1165)
.+.
T Consensus 235 ~~~ 237 (377)
T 3dwl_C 235 SAP 237 (377)
T ss_dssp CST
T ss_pred CCC
Confidence 654
No 17
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.28 E-value=4.4e-11 Score=130.92 Aligned_cols=129 Identities=16% Similarity=0.242 Sum_probs=98.2
Q ss_pred CceEEEeecCCcEEEEeCcc-hhhHhh-----cCCcc-----------------------EEEeecC-CCceeEEecCCC
Q 001070 157 KHYVCYGLKGGNVRVLNLNT-ATRSLL-----RGHTK-----------------------IKIWEDS-KVAPLIILKPHG 206 (1165)
Q Consensus 157 ~~yIayG~kdg~IRVwdi~t-~ir~ll-----rGH~q-----------------------VriWD~~-~g~pl~~lephd 206 (1165)
+.+|++|..||.|||||+.+ .....+ .||.. |||||.+ .+.++..+.+|.
T Consensus 170 ~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~ 249 (380)
T 3iz6_a 170 ETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE 249 (380)
T ss_dssp SSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS
T ss_pred CCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC
Confidence 56799999999999999998 332233 67765 9999998 457899999996
Q ss_pred CCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecC
Q 001070 207 GQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQ 286 (1165)
Q Consensus 207 G~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~ 286 (1165)
| .|++|+| .|++ .+|+ +|+.|++|||||+..+ .|++++..+.... ..+..++..++++|+
T Consensus 250 ~-~v~~v~~--~p~~---~~l~-s~s~D~~i~lwd~~~~------------~~~~~~~~~~~~~-~~~~~~v~~~~~s~~ 309 (380)
T 3iz6_a 250 G-DINSVKF--FPDG---QRFG-TGSDDGTCRLFDMRTG------------HQLQVYNREPDRN-DNELPIVTSVAFSIS 309 (380)
T ss_dssp S-CCCEEEE--CTTS---SEEE-EECSSSCEEEEETTTT------------EEEEEECCCCSSS-CCSSCSCSEEEECSS
T ss_pred C-CeEEEEE--ecCC---CeEE-EEcCCCeEEEEECCCC------------cEEEEeccccccc-ccccCceEEEEECCC
Confidence 4 8999999 4554 4355 6889999999998544 8999998754322 123456789999999
Q ss_pred CcEEEEeccCCCcEEEEEee
Q 001070 287 AGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 287 a~~ilLan~~r~aIYalhl~ 306 (1165)
+.+|+.+.. ...||...+.
T Consensus 310 g~~l~~g~~-dg~i~vwd~~ 328 (380)
T 3iz6_a 310 GRLLFAGYS-NGDCYVWDTL 328 (380)
T ss_dssp SSEEEEECT-TSCEEEEETT
T ss_pred CCEEEEEEC-CCCEEEEECC
Confidence 999887765 4567776543
No 18
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.27 E-value=1.4e-10 Score=127.10 Aligned_cols=169 Identities=16% Similarity=0.295 Sum_probs=124.8
Q ss_pred cEeeecCceEEEeecCCcEEEEeCcc--hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCC
Q 001070 151 RQIAVNKHYVCYGLKGGNVRVLNLNT--ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHG 206 (1165)
Q Consensus 151 R~IAVn~~yIayG~kdg~IRVwdi~t--~ir~llrGH~q----------------------VriWD~~~g~pl~~lephd 206 (1165)
..++.|+++|++|..||.|+|||+.+ .....+.+|.. |+|||.+++.++..+.+|.
T Consensus 180 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~ 259 (401)
T 4aez_A 180 GCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHN 259 (401)
T ss_dssp EEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCS
T ss_pred EEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCc
Confidence 34777999999999999999999984 55567889987 9999999999999999884
Q ss_pred CCCcceeEeecCCCCCCceEEEee--cCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEee
Q 001070 207 GQPVNSAQYLTAPNQAGHIILVTA--GPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVL 284 (1165)
Q Consensus 207 G~sV~SVaFl~aP~~~d~~~lvts--GslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~ 284 (1165)
..|.+++| .|++.. ++++ |+.|++|++||+.. ++|+.++.. ..-+..++++
T Consensus 260 -~~v~~~~~--~p~~~~---ll~~~~gs~d~~i~i~d~~~------------~~~~~~~~~---------~~~v~~~~~s 312 (401)
T 4aez_A 260 -AAVKAVAW--CPWQSN---LLATGGGTMDKQIHFWNAAT------------GARVNTVDA---------GSQVTSLIWS 312 (401)
T ss_dssp -SCCCEEEE--CTTSTT---EEEEECCTTTCEEEEEETTT------------CCEEEEEEC---------SSCEEEEEEC
T ss_pred -ceEEEEEE--CCCCCC---EEEEecCCCCCEEEEEECCC------------CCEEEEEeC---------CCcEEEEEEC
Confidence 59999999 576655 4444 55999999999854 389999873 2446799999
Q ss_pred cCCcEEEEec-cCCCcEEEEEeecCCCccccccccccccc-cccceeeeeeccCC------CCcceEEEEEeehhh
Q 001070 285 SQAGLLLFAN-AKKNAIYSVHLGYGNNSAATRIDYIAEFT-VTMPVLSFTGTIDP------PSEHIIKLYCVQTQA 352 (1165)
Q Consensus 285 p~a~~ilLan-~~r~aIYalhl~~g~~~~~~r~dyiaeF~-v~~PILSft~~~d~------~ge~~vq~yCvQtqA 352 (1165)
|++.+|+.+. .....|+..++..+.- ..+.++. -..+|.++....|+ ...+.|++|-+.+.-
T Consensus 313 ~~~~~l~~~~g~~dg~i~v~~~~~~~~------~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 313 PHSKEIMSTHGFPDNNLSIWSYSSSGL------TKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp SSSSEEEEEECTTTCEEEEEEEETTEE------EEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred CCCCeEEEEeecCCCcEEEEecCCccc------eeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 9999999874 3677899988875321 1111211 12456666555444 345678888877654
No 19
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.26 E-value=5.2e-11 Score=128.68 Aligned_cols=141 Identities=19% Similarity=0.264 Sum_probs=106.0
Q ss_pred cCceEEEeecCCcEEEEeCcch----hhHhhcCCcc----------------------EEEeecCCCc--eeEEecCCCC
Q 001070 156 NKHYVCYGLKGGNVRVLNLNTA----TRSLLRGHTK----------------------IKIWEDSKVA--PLIILKPHGG 207 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t~----ir~llrGH~q----------------------VriWD~~~g~--pl~~lephdG 207 (1165)
||+||++|..||.|||||+.+. ....+.+|.. |||||.+++. ++.++++|.
T Consensus 116 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~- 194 (345)
T 3fm0_A 116 SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHE- 194 (345)
T ss_dssp TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCS-
T ss_pred CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCC-
Confidence 6999999999999999999862 2346788876 9999998874 578899885
Q ss_pred CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCC---CCCCCCCCCcceEEEEeccCCCCCccccccEEEEEee
Q 001070 208 QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEG---WSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVL 284 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~---~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~ 284 (1165)
..|++|+| .|++ .+|+ +|+.|++|+||+...+.. .........|+|+.++.+ .|...+..++.+
T Consensus 195 ~~v~~l~~--sp~g---~~l~-s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~h~~~v~~v~~~ 261 (345)
T 3fm0_A 195 STVWSLAF--DPSG---QRLA-SCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSG-------FHSRTIYDIAWC 261 (345)
T ss_dssp SCEEEEEE--CTTS---SEEE-EEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECS-------SCSSCEEEEEEC
T ss_pred CceEEEEE--CCCC---CEEE-EEeCCCeEEEeccccCCCCccceeeccCCccceeEEecC-------CCCCcEEEEEEe
Confidence 48999999 4554 5455 688999999999744321 111122346999999985 366778899999
Q ss_pred cCCcEEEEeccCCCcEEEEEeecCCCc
Q 001070 285 SQAGLLLFANAKKNAIYSVHLGYGNNS 311 (1165)
Q Consensus 285 p~a~~ilLan~~r~aIYalhl~~g~~~ 311 (1165)
|++++|+.+.. ...|+...+..+..+
T Consensus 262 ~~~~~l~s~~~-d~~i~vw~~~~~~~~ 287 (345)
T 3fm0_A 262 QLTGALATACG-DDAIRVFQEDPNSDP 287 (345)
T ss_dssp TTTCCEEEEET-TSCEEEEEECTTSCT
T ss_pred cCCCEEEEEeC-CCeEEEEEeCCCCCc
Confidence 99998877765 467888887765543
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.26 E-value=5.7e-11 Score=127.61 Aligned_cols=170 Identities=14% Similarity=0.254 Sum_probs=110.1
Q ss_pred cCceEEEeecCCcEEEEeCcc--------hhhHhhcCCcc----------------------EEEeecCC-C---ceeEE
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT--------ATRSLLRGHTK----------------------IKIWEDSK-V---APLII 201 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t--------~ir~llrGH~q----------------------VriWD~~~-g---~pl~~ 201 (1165)
||++|++|..||.|||||+.. .....|+||+. |||||.+. + .++.+
T Consensus 69 ~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~ 148 (330)
T 2hes_X 69 HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISV 148 (330)
T ss_dssp TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEE
T ss_pred CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEE
Confidence 689999999999999999953 23446889987 99999953 2 46888
Q ss_pred ecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEE
Q 001070 202 LKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQV 281 (1165)
Q Consensus 202 lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV 281 (1165)
+.+|. ..|++|+| .|++ .+|+ +|+.|++||||+...+ .|+|+.+|.+ |...+..+
T Consensus 149 ~~~h~-~~v~~v~~--~p~~---~~l~-s~s~D~~i~iW~~~~~----------~~~~~~~~~~--------h~~~v~~~ 203 (330)
T 2hes_X 149 LQEHS-QDVKHVIW--HPSE---ALLA-SSSYDDTVRIWKDYDD----------DWECVAVLNG--------HEGTVWSS 203 (330)
T ss_dssp ECCCS-SCEEEEEE--CSSS---SEEE-EEETTSCEEEEEEETT----------EEEEEEEECC--------CSSCEEEE
T ss_pred eccCC-CceEEEEE--CCCC---CEEE-EEcCCCeEEEEECCCC----------CeeEEEEccC--------CCCcEEEE
Confidence 98885 48999999 4554 4355 6889999999997432 4689999984 77788899
Q ss_pred EeecCC-cEEEEeccCCCcEEEEEeecCCCccccccccccccc--cccceeeeeeccCC-----CCcceEEEEEeeh
Q 001070 282 VVLSQA-GLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFT--VTMPVLSFTGTIDP-----PSEHIIKLYCVQT 350 (1165)
Q Consensus 282 ~~~p~a-~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~--v~~PILSft~~~d~-----~ge~~vq~yCvQt 350 (1165)
+++|+. +..|++-..-..|+...+..+.......+..+..|. -..+|.++.-..+. ...+.|++|-+.+
T Consensus 204 ~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 204 DFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVD 280 (330)
T ss_dssp EECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEET
T ss_pred EecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCC
Confidence 999984 344555555566777766644322111111122221 23355555443222 2345788887654
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.26 E-value=3.7e-11 Score=126.06 Aligned_cols=125 Identities=18% Similarity=0.298 Sum_probs=102.3
Q ss_pred ecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCCcc
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQPVN 211 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~sV~ 211 (1165)
-||+||++|..||.|||||+.+ .....+.||.. |+|||..++.++..+++|. ..|+
T Consensus 33 ~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~ 111 (312)
T 4ery_A 33 PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS-NYVF 111 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEE
T ss_pred CCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCC-CCEE
Confidence 3689999999999999999987 66778899987 9999999999999999985 4899
Q ss_pred eeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEE
Q 001070 212 SAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLL 291 (1165)
Q Consensus 212 SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~il 291 (1165)
+++| .|+ +.+|+ +|+.|++|+|||+.. ++|++++.. |..-+..++++|++.+|+
T Consensus 112 ~~~~--~~~---~~~l~-s~~~d~~i~iwd~~~------------~~~~~~~~~--------~~~~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 112 CCNF--NPQ---SNLIV-SGSFDESVRIWDVKT------------GKCLKTLPA--------HSDPVSAVHFNRDGSLIV 165 (312)
T ss_dssp EEEE--CSS---SSEEE-EEETTSCEEEEETTT------------CCEEEEECC--------CSSCEEEEEECTTSSEEE
T ss_pred EEEE--cCC---CCEEE-EEeCCCcEEEEECCC------------CEEEEEecC--------CCCcEEEEEEcCCCCEEE
Confidence 9999 354 34455 688999999999844 389999874 566678899999999887
Q ss_pred EeccCCCcEEEEEeec
Q 001070 292 FANAKKNAIYSVHLGY 307 (1165)
Q Consensus 292 Lan~~r~aIYalhl~~ 307 (1165)
.+... ..|+...+..
T Consensus 166 ~~~~d-~~i~~wd~~~ 180 (312)
T 4ery_A 166 SSSYD-GLCRIWDTAS 180 (312)
T ss_dssp EEETT-SCEEEEETTT
T ss_pred EEeCC-CcEEEEECCC
Confidence 77654 4677766653
No 22
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.25 E-value=3e-11 Score=130.00 Aligned_cols=126 Identities=17% Similarity=0.296 Sum_probs=100.8
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCC
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQP 209 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~s 209 (1165)
+..||+||++|..||.|+|||+.+ .....+.+|.. |+|||.+++.++.++++|. .+
T Consensus 130 ~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~-~~ 208 (321)
T 3ow8_A 130 FSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA-MP 208 (321)
T ss_dssp ECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-SC
T ss_pred ECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccC-Cc
Confidence 344799999999999999999998 44446667754 9999999999999999885 48
Q ss_pred cceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcE
Q 001070 210 VNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGL 289 (1165)
Q Consensus 210 V~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ 289 (1165)
|++++| .|++ .+|+ +|+.|++|+|||+.. +.|..+|.+ |...+..++++|++.+
T Consensus 209 v~~l~~--spd~---~~l~-s~s~dg~i~iwd~~~------------~~~~~~~~~--------h~~~v~~~~~sp~~~~ 262 (321)
T 3ow8_A 209 IRSLTF--SPDS---QLLV-TASDDGYIKIYDVQH------------ANLAGTLSG--------HASWVLNVAFCPDDTH 262 (321)
T ss_dssp CCEEEE--CTTS---CEEE-EECTTSCEEEEETTT------------CCEEEEECC--------CSSCEEEEEECTTSSE
T ss_pred eeEEEE--cCCC---CEEE-EEcCCCeEEEEECCC------------cceeEEEcC--------CCCceEEEEECCCCCE
Confidence 999999 4554 4455 688999999999844 378888884 7788899999999998
Q ss_pred EEEeccCCCcEEEEEee
Q 001070 290 LLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 290 ilLan~~r~aIYalhl~ 306 (1165)
|+.+... ..|+...+.
T Consensus 263 l~s~s~D-~~v~iwd~~ 278 (321)
T 3ow8_A 263 FVSSSSD-KSVKVWDVG 278 (321)
T ss_dssp EEEEETT-SCEEEEETT
T ss_pred EEEEeCC-CcEEEEeCC
Confidence 8777654 456655543
No 23
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.25 E-value=3.3e-11 Score=140.82 Aligned_cols=169 Identities=16% Similarity=0.224 Sum_probs=114.6
Q ss_pred eeecCceEEEeecCCcEEEEeCcc---hhhHhhcCCcc--------------------------EEEeecCCCceeEEec
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT---ATRSLLRGHTK--------------------------IKIWEDSKVAPLIILK 203 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t---~ir~llrGH~q--------------------------VriWD~~~g~pl~~le 203 (1165)
++.||+|||+|..||.|||||+.+ ..+..|.||+. |++|| .|.++..++
T Consensus 67 ~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~ 144 (611)
T 1nr0_A 67 TSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLT 144 (611)
T ss_dssp ECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCC
T ss_pred ECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceec
Confidence 344899999999999999999975 23446778864 66776 466788888
Q ss_pred CCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEe
Q 001070 204 PHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVV 283 (1165)
Q Consensus 204 phdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~ 283 (1165)
+|. ..|++|+| .|+++. ++++|+.|++|||||.. .++|..+|. +|.+.++.|++
T Consensus 145 gh~-~~v~~v~f--~p~~~~---~l~s~s~D~~v~lwd~~------------~~~~~~~l~--------~H~~~V~~v~f 198 (611)
T 1nr0_A 145 GQA-RAMNSVDF--KPSRPF---RIISGSDDNTVAIFEGP------------PFKFKSTFG--------EHTKFVHSVRY 198 (611)
T ss_dssp CCS-SCEEEEEE--CSSSSC---EEEEEETTSCEEEEETT------------TBEEEEEEC--------CCSSCEEEEEE
T ss_pred CCC-CCceEEEE--CCCCCe---EEEEEeCCCeEEEEECC------------CCeEeeeec--------cccCceEEEEE
Confidence 885 49999999 566543 56679999999999963 358999998 47889999999
Q ss_pred ecCCcEEEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC------CCcceEEEEEeeh
Q 001070 284 LSQAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP------PSEHIIKLYCVQT 350 (1165)
Q Consensus 284 ~p~a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~------~ge~~vq~yCvQt 350 (1165)
+|++.+|+-+... ..|+...+..+..-.......+..+.-..+|.++.-..|+ ...+.|+++-+.+
T Consensus 199 spdg~~las~s~D-~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 199 NPDGSLFASTGGD-GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp CTTSSEEEEEETT-SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCCCEEEEEECC-CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 9999987766554 4566555443221000000011111234466666554444 1235688887655
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.25 E-value=2.1e-11 Score=131.76 Aligned_cols=127 Identities=18% Similarity=0.281 Sum_probs=99.5
Q ss_pred ecCceEEEeecCCcEEEEeCcch----hhHhhcCCcc----------------------EEEeecCCC--ceeEEecCCC
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNTA----TRSLLRGHTK----------------------IKIWEDSKV--APLIILKPHG 206 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t~----ir~llrGH~q----------------------VriWD~~~g--~pl~~lephd 206 (1165)
-||++||+|..||.|||||+.+. ...++.||.. |+|||..++ .++.++++|.
T Consensus 26 p~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~ 105 (345)
T 3fm0_A 26 PAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHE 105 (345)
T ss_dssp TTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCS
T ss_pred CCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCC
Confidence 37999999999999999999873 2235689987 999998876 4688999885
Q ss_pred CCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecC
Q 001070 207 GQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQ 286 (1165)
Q Consensus 207 G~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~ 286 (1165)
..|++|+| .|++ .+|+ +|+.|++|+|||+..+ ..+.|+.++.. |...+..++.+|+
T Consensus 106 -~~v~~v~~--sp~~---~~l~-s~s~D~~v~iwd~~~~---------~~~~~~~~~~~--------h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 106 -NEVKSVAW--APSG---NLLA-TCSRDKSVWVWEVDEE---------DEYECVSVLNS--------HTQDVKHVVWHPS 161 (345)
T ss_dssp -SCEEEEEE--CTTS---SEEE-EEETTSCEEEEEECTT---------SCEEEEEEECC--------CCSCEEEEEECSS
T ss_pred -CCceEEEE--eCCC---CEEE-EEECCCeEEEEECCCC---------CCeEEEEEecC--------cCCCeEEEEECCC
Confidence 48999999 4544 5455 6889999999998665 34589999884 6777889999999
Q ss_pred CcEEEEeccCCCcEEEEEee
Q 001070 287 AGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 287 a~~ilLan~~r~aIYalhl~ 306 (1165)
+.+|+.+...+ .|+...+.
T Consensus 162 ~~~l~s~s~d~-~i~~w~~~ 180 (345)
T 3fm0_A 162 QELLASASYDD-TVKLYREE 180 (345)
T ss_dssp SSCEEEEETTS-CEEEEEEE
T ss_pred CCEEEEEeCCC-cEEEEEec
Confidence 99888776554 45555444
No 25
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.24 E-value=7.5e-11 Score=125.91 Aligned_cols=178 Identities=16% Similarity=0.281 Sum_probs=107.8
Q ss_pred ecCceEEEeecCCcEEEEeCcch---hhHhhcCCcc------------------------EEEeecCCC--ceeEEecCC
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNTA---TRSLLRGHTK------------------------IKIWEDSKV--APLIILKPH 205 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t~---ir~llrGH~q------------------------VriWD~~~g--~pl~~leph 205 (1165)
.||+|||+|..||.|||||+.+. ....|+||+. |||||.+++ .++..+.+|
T Consensus 23 ~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h 102 (316)
T 3bg1_A 23 YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGH 102 (316)
T ss_dssp GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCC
T ss_pred CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCC
Confidence 36888889999999999998762 2346788865 889998877 356777777
Q ss_pred CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCC------------------------------------
Q 001070 206 GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWS------------------------------------ 249 (1165)
Q Consensus 206 dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~------------------------------------ 249 (1165)
. ..|++|+| .|+..+ . ++++|+.|++|+||++..+..|.
T Consensus 103 ~-~~V~~v~~--~p~~~g-~-~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 177 (316)
T 3bg1_A 103 D-SSVNSVCW--APHDYG-L-ILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPN 177 (316)
T ss_dssp S-SCCCEEEE--CCTTTC-S-CEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCC
T ss_pred C-CceEEEEE--CCCCCC-c-EEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCcc
Confidence 5 38999999 465322 3 24467788888888876542220
Q ss_pred -----CCC--CC----------CCcceEEEEeccCCCCCccccccEEEEEeecCCc---EEEEeccCCCcEEEEEeecCC
Q 001070 250 -----LPT--HA----------ESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAG---LLLFANAKKNAIYSVHLGYGN 309 (1165)
Q Consensus 250 -----~~~--~~----------~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~---~ilLan~~r~aIYalhl~~g~ 309 (1165)
+-+ |+ ..|+|+++|. +|.+.++.|+.+|+++ -+|++-..-..|+...+..+.
T Consensus 178 ~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~--------~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~ 249 (316)
T 3bg1_A 178 YIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE--------AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDAS 249 (316)
T ss_dssp CCCBEECCBTTSBCCEEEECTTSCEEEEECCB--------CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTT
T ss_pred ccceEEEecCCCeEEEEEeCCCCccceeeecc--------cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcc
Confidence 000 00 1134555554 5788899999999972 344444555677777765422
Q ss_pred CccccccccccccccccceeeeeeccCC------CCcceEEEEEe
Q 001070 310 NSAATRIDYIAEFTVTMPVLSFTGTIDP------PSEHIIKLYCV 348 (1165)
Q Consensus 310 ~~~~~r~dyiaeF~v~~PILSft~~~d~------~ge~~vq~yCv 348 (1165)
... .....+..| ..+|.++.-..++ .+.+.|++|-.
T Consensus 250 ~~~-~~~~~~~~~--~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 250 SNT-WSPKLLHKF--NDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp CCC-CBCCEEEEC--SSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred ccc-hhhhhhhcC--CCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 110 011112222 4566665544443 23456888854
No 26
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.21 E-value=7.6e-11 Score=139.17 Aligned_cols=167 Identities=19% Similarity=0.331 Sum_probs=118.7
Q ss_pred eecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCC--
Q 001070 154 AVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQ-- 208 (1165)
Q Consensus 154 AVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~-- 208 (1165)
+.||+||++|..||.|||||+.+ .....|.||+. |||||....+.....+...||
T Consensus 439 s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~ 518 (694)
T 3dm0_A 439 SSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRD 518 (694)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSS
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCC
Confidence 34799999999999999999998 55567899988 999998877655555544444
Q ss_pred CcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCc
Q 001070 209 PVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAG 288 (1165)
Q Consensus 209 sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~ 288 (1165)
.|.+++| .|++.. . ++.+|+.|++|+|||+.. ++|..+|.+ |...+..|+++|++.
T Consensus 519 ~v~~~~~--~~~~~~-~-~l~s~s~d~~v~vwd~~~------------~~~~~~~~~--------h~~~v~~v~~spdg~ 574 (694)
T 3dm0_A 519 WVSCVRF--SPNTLQ-P-TIVSASWDKTVKVWNLSN------------CKLRSTLAG--------HTGYVSTVAVSPDGS 574 (694)
T ss_dssp CEEEEEE--CSCSSS-C-EEEEEETTSCEEEEETTT------------CCEEEEECC--------CSSCEEEEEECTTSS
T ss_pred cEEEEEE--eCCCCc-c-eEEEEeCCCeEEEEECCC------------CcEEEEEcC--------CCCCEEEEEEeCCCC
Confidence 7999999 466533 2 355789999999999844 389999884 778899999999999
Q ss_pred EEEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC-----CCcceEEEEEeehhhh
Q 001070 289 LLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP-----PSEHIIKLYCVQTQAI 353 (1165)
Q Consensus 289 ~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~-----~ge~~vq~yCvQtqAI 353 (1165)
+|+.+... ..|+...+..+. .+..+....+|.++....+. .+++.|++|-+.+..+
T Consensus 575 ~l~sg~~D-g~i~iwd~~~~~--------~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 575 LCASGGKD-GVVLLWDLAEGK--------KLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSI 635 (694)
T ss_dssp EEEEEETT-SBCEEEETTTTE--------EEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEE
T ss_pred EEEEEeCC-CeEEEEECCCCc--------eEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCC
Confidence 88776654 456666554322 12233334455555444443 1234588888776543
No 27
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.21 E-value=1.3e-10 Score=121.82 Aligned_cols=125 Identities=17% Similarity=0.343 Sum_probs=99.3
Q ss_pred ecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCCcc
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQPVN 211 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~sV~ 211 (1165)
-||++|++|..||.|||||+.+ .....|+||.. |+|||.+++.++..+..|. .+|.
T Consensus 75 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~ 153 (312)
T 4ery_A 75 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVS 153 (312)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEE
T ss_pred CCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCC-CcEE
Confidence 3689999999999999999998 66668899987 9999999999999999885 5899
Q ss_pred eeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEE
Q 001070 212 SAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLL 291 (1165)
Q Consensus 212 SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~il 291 (1165)
+++| .|++ .+|+ +|+.|++|++||+..+ +|+.++.. .+...+..++++|++.+|+
T Consensus 154 ~~~~--~~~~---~~l~-~~~~d~~i~~wd~~~~------------~~~~~~~~-------~~~~~~~~~~~~~~~~~l~ 208 (312)
T 4ery_A 154 AVHF--NRDG---SLIV-SSSYDGLCRIWDTASG------------QCLKTLID-------DDNPPVSFVKFSPNGKYIL 208 (312)
T ss_dssp EEEE--CTTS---SEEE-EEETTSCEEEEETTTC------------CEEEEECC-------SSCCCEEEEEECTTSSEEE
T ss_pred EEEE--cCCC---CEEE-EEeCCCcEEEEECCCC------------ceeeEEec-------cCCCceEEEEECCCCCEEE
Confidence 9999 4544 4455 5889999999998443 78887753 2345567889999999988
Q ss_pred EeccCCCcEEEEEee
Q 001070 292 FANAKKNAIYSVHLG 306 (1165)
Q Consensus 292 Lan~~r~aIYalhl~ 306 (1165)
.+... ..|+...+.
T Consensus 209 ~~~~d-~~i~iwd~~ 222 (312)
T 4ery_A 209 AATLD-NTLKLWDYS 222 (312)
T ss_dssp EEETT-TEEEEEETT
T ss_pred EEcCC-CeEEEEECC
Confidence 87655 456655543
No 28
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.20 E-value=3.1e-10 Score=119.81 Aligned_cols=131 Identities=17% Similarity=0.208 Sum_probs=96.5
Q ss_pred CceEEEeecCCcEEEEeCcch---hhHhhcCCcc------------------------EEEeecCCCc--eeEEecCCCC
Q 001070 157 KHYVCYGLKGGNVRVLNLNTA---TRSLLRGHTK------------------------IKIWEDSKVA--PLIILKPHGG 207 (1165)
Q Consensus 157 ~~yIayG~kdg~IRVwdi~t~---ir~llrGH~q------------------------VriWD~~~g~--pl~~lephdG 207 (1165)
|++|++|..||.|||||+.+. ....+.+|.. |||||.+++. ....+++|.
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~- 145 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHA- 145 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCS-
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeeccc-
Confidence 789999999999999999873 2335677754 9999998763 256778884
Q ss_pred CCcceeEeecCCCCC----------CceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcccccc
Q 001070 208 QPVNSAQYLTAPNQA----------GHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAF 277 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~~----------d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~af 277 (1165)
..|++++| .|++. +.++|+ +|+.|++|||||+..+. ..+.|..+|. +|.+.
T Consensus 146 ~~v~~~~~--~p~~~~~~~~~~~~~~~~~l~-sgs~D~~v~lwd~~~~~--------~~~~~~~~l~--------~H~~~ 206 (297)
T 2pm7_B 146 IGVNSASW--APATIEEDGEHNGTKESRKFV-TGGADNLVKIWKYNSDA--------QTYVLESTLE--------GHSDW 206 (297)
T ss_dssp SCEEEEEE--CCCC------------CCEEE-EEETTSCEEEEEEETTT--------TEEEEEEEEC--------CCSSC
T ss_pred CccceEee--cCCcccccccCCCCCCcceEE-EEcCCCcEEEEEEcCCC--------ceEEEEEEec--------CCCCc
Confidence 48999999 46531 234344 68899999999986542 3467888887 47889
Q ss_pred EEEEEeecCC--cEEEEeccCCCcEEEEEeec
Q 001070 278 FNQVVVLSQA--GLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 278 f~sV~~~p~a--~~ilLan~~r~aIYalhl~~ 307 (1165)
+..|+.+|++ +-+|++-..-..|+...+..
T Consensus 207 V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 207 VRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred eEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 9999999996 44455555556677776654
No 29
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.19 E-value=2.5e-10 Score=124.56 Aligned_cols=166 Identities=16% Similarity=0.198 Sum_probs=118.4
Q ss_pred cCceEEEeecCCcEEEEeCcch--------hhHhhcCCcc-----------------------EEEeecCCCceeEEe--
Q 001070 156 NKHYVCYGLKGGNVRVLNLNTA--------TRSLLRGHTK-----------------------IKIWEDSKVAPLIIL-- 202 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t~--------ir~llrGH~q-----------------------VriWD~~~g~pl~~l-- 202 (1165)
|+++|++|..||.|||||+.+. ....|.||.. |+|||.+++.++..+
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 172 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP 172 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec
Confidence 7899999999999999999973 2447889987 999999999999999
Q ss_pred cCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccc-cEEEE
Q 001070 203 KPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEA-FFNQV 281 (1165)
Q Consensus 203 ephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~a-ff~sV 281 (1165)
..|. ..|++++| .|++ .+|+ +|+.|++|+|||+.. ++|+.++.. +|.. .+..+
T Consensus 173 ~~~~-~~v~~~~~--~~~~---~~l~-~~~~d~~i~iwd~~~------------~~~~~~~~~-------~~~~~~~~~~ 226 (402)
T 2aq5_A 173 DVHP-DTIYSVDW--SRDG---ALIC-TSCRDKRVRVIEPRK------------GTVVAEKDR-------PHEGTRPVHA 226 (402)
T ss_dssp TTCC-SCEEEEEE--CTTS---SCEE-EEETTSEEEEEETTT------------TEEEEEEEC-------SSCSSSCCEE
T ss_pred CCCC-CceEEEEE--CCCC---CEEE-EEecCCcEEEEeCCC------------Cceeeeecc-------CCCCCcceEE
Confidence 7774 59999999 4554 4356 577999999999844 388888842 1222 35678
Q ss_pred EeecCCcEEEEec--cCCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC-------CCcceEEEEEeehhh
Q 001070 282 VVLSQAGLLLFAN--AKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP-------PSEHIIKLYCVQTQA 352 (1165)
Q Consensus 282 ~~~p~a~~ilLan--~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~-------~ge~~vq~yCvQtqA 352 (1165)
+.+|++.+|+.+. .....|+...+..+..+. .+..+....+|+++....|. .+.+.|++|-+.+..
T Consensus 227 ~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 227 VFVSEGKILTTGFSRMSERQVALWDTKHLEEPL-----SLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EECSTTEEEEEEECTTCCEEEEEEETTBCSSCS-----EEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred EEcCCCcEEEEeccCCCCceEEEEcCccccCCc-----eEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 8999988887763 456677777776543311 11122233455555554443 245689999887654
No 30
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.19 E-value=9.1e-11 Score=130.50 Aligned_cols=163 Identities=14% Similarity=0.114 Sum_probs=109.6
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhH--hhcCCcc-----------------------EEEeecCCCceeEEecCCCCC-
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRS--LLRGHTK-----------------------IKIWEDSKVAPLIILKPHGGQ- 208 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~--llrGH~q-----------------------VriWD~~~g~pl~~lephdG~- 208 (1165)
++++||+|.+||.|||||+.+ .... .+.||+. |||||.+++. +..+..+++.
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~~ 209 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI-LRVFASSDTIN 209 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE-EEEEECCSSCS
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc-eeEEeccCCCC
Confidence 467999999999999999987 3222 4678987 9999998765 4555555443
Q ss_pred -CcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCC
Q 001070 209 -PVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQA 287 (1165)
Q Consensus 209 -sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a 287 (1165)
.|++++|. |+ +.+|+ +|+.|++|+|||+.+ +|+.+|. +|..-++.|+++|++
T Consensus 210 ~~~~~~~~~--~~---~~~l~-~g~~dg~i~~wd~~~-------------~~~~~~~--------~h~~~v~~v~~~p~~ 262 (435)
T 4e54_B 210 IWFCSLDVS--AS---SRMVV-TGDNVGNVILLNMDG-------------KELWNLR--------MHKKKVTHVALNPCC 262 (435)
T ss_dssp CCCCCEEEE--TT---TTEEE-EECSSSBEEEEESSS-------------CBCCCSB--------CCSSCEEEEEECTTC
T ss_pred ccEEEEEEC--CC---CCEEE-EEeCCCcEeeeccCc-------------ceeEEEe--------cccceEEeeeecCCC
Confidence 78999994 44 45355 688999999999732 4556665 477888999999999
Q ss_pred cEEEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC------CCcceEEEEEeeh
Q 001070 288 GLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP------PSEHIIKLYCVQT 350 (1165)
Q Consensus 288 ~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~------~ge~~vq~yCvQt 350 (1165)
.++|++......|+...+..+... ..++..+.-..+|.++....|+ ...+.|++|-+.+
T Consensus 263 ~~~~~s~s~d~~v~iwd~~~~~~~----~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 263 DWFLATASVDQTVKIWDLRQVRGK----ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp SSEEEEEETTSBCCEEETTTCCSS----SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSS
T ss_pred ceEEEEecCcceeeEEeccccccc----ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCC
Confidence 977776666666766665543321 1112222234566665544433 1235688886654
No 31
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.19 E-value=8.6e-11 Score=128.65 Aligned_cols=127 Identities=16% Similarity=0.179 Sum_probs=98.2
Q ss_pred cCceEEEeecCCcEEEEeCcc--hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCC---
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT--ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQ--- 208 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t--~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~--- 208 (1165)
|+.+|++|..||.|||||+.. .....|.||+. |||||.++|.++..+..+.+.
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 296 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDN 296 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccccc
Confidence 689999999999999999974 45557899987 999999999999998776332
Q ss_pred ---CcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeec
Q 001070 209 ---PVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS 285 (1165)
Q Consensus 209 ---sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p 285 (1165)
.|.+++| +|++ .+|+ +|+.|++|+|||+..+ +|..++... ..+|...+..++++|
T Consensus 297 ~~~~v~~~~~--s~~g---~~l~-~g~~dg~i~vwd~~~~------------~~~~~~~~~----~~~h~~~v~~l~~s~ 354 (380)
T 3iz6_a 297 ELPIVTSVAF--SISG---RLLF-AGYSNGDCYVWDTLLA------------EMVLNLGTL----QNSHEGRISCLGLSS 354 (380)
T ss_dssp SSCSCSEEEE--CSSS---SEEE-EECTTSCEEEEETTTC------------CEEEEECCS----CSSCCCCCCEEEECS
T ss_pred ccCceEEEEE--CCCC---CEEE-EEECCCCEEEEECCCC------------ceEEEEecc----cCCCCCceEEEEECC
Confidence 5999999 4544 5455 5888999999998544 777777421 125788899999999
Q ss_pred CCcEEEEeccCCCcEEEEEe
Q 001070 286 QAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 286 ~a~~ilLan~~r~aIYalhl 305 (1165)
++.+|+-+...+ .|+.-.+
T Consensus 355 dg~~l~sgs~D~-~i~iW~~ 373 (380)
T 3iz6_a 355 DGSALCTGSWDK-NLKIWAF 373 (380)
T ss_dssp SSSEEEEECTTS-CEEEEEC
T ss_pred CCCEEEEeeCCC-CEEEEec
Confidence 999987776554 4444433
No 32
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.18 E-value=1.1e-10 Score=125.69 Aligned_cols=116 Identities=10% Similarity=0.152 Sum_probs=94.8
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCC-CCcc
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGG-QPVN 211 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG-~sV~ 211 (1165)
|++||++|..||.|||||+.+ .....|.||.. |||||.+++.++..+..+.. ..|.
T Consensus 195 ~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~ 274 (340)
T 1got_B 195 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGIT 274 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceE
Confidence 689999999999999999998 66678899987 99999999988888763321 3799
Q ss_pred eeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEE
Q 001070 212 SAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLL 291 (1165)
Q Consensus 212 SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~il 291 (1165)
+++| .|++ .+|+ +|+.|++|+|||... +.|+.+|.+ |...+..++++|++.+|+
T Consensus 275 ~~~~--s~~g---~~l~-~g~~d~~i~vwd~~~------------~~~~~~~~~--------h~~~v~~~~~s~dg~~l~ 328 (340)
T 1got_B 275 SVSF--SKSG---RLLL-AGYDDFNCNVWDALK------------ADRAGVLAG--------HDNRVSCLGVTDDGMAVA 328 (340)
T ss_dssp EEEE--CTTS---SEEE-EEETTSEEEEEETTT------------CCEEEEEEC--------CSSCEEEEEECTTSSCEE
T ss_pred EEEE--CCCC---CEEE-EECCCCeEEEEEccc------------CcEeeEeec--------CCCcEEEEEEcCCCCEEE
Confidence 9999 4544 5455 588999999999743 488999984 778889999999999888
Q ss_pred EeccCC
Q 001070 292 FANAKK 297 (1165)
Q Consensus 292 Lan~~r 297 (1165)
-+...+
T Consensus 329 s~s~D~ 334 (340)
T 1got_B 329 TGSWDS 334 (340)
T ss_dssp EEETTS
T ss_pred EEcCCc
Confidence 776543
No 33
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.18 E-value=1.7e-10 Score=130.34 Aligned_cols=119 Identities=13% Similarity=0.128 Sum_probs=81.3
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc-------------------------------------EEEeecCCCc
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK-------------------------------------IKIWEDSKVA 197 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q-------------------------------------VriWD~~~g~ 197 (1165)
|+.+|++|..||+|||||++| .....|.||.. ||+||..+|.
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 679999999999999999998 55556665431 5667766666
Q ss_pred eeEEe-----cCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCc
Q 001070 198 PLIIL-----KPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPR 272 (1165)
Q Consensus 198 pl~~l-----ephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~ 272 (1165)
.+.++ .+|.|. +.+..|. +. ++++|+.|++|||||+.++ +|++||++
T Consensus 272 ~l~v~~~~~p~Gh~~~-~lsg~~s-------g~-~lASgS~DgTIkIWDl~tG------------k~l~tL~g------- 323 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGR-FLEGDVK-------DH-CAAAILTSGTIAIWDLLLG------------QCTALLPP------- 323 (356)
T ss_dssp EEEEEEECCCTTCCCC-EEEEEEE-------TT-EEEEEETTSCEEEEETTTC------------SEEEEECC-------
T ss_pred EEEEEEeeccCCCcce-eEccccC-------CC-EEEEEcCCCcEEEEECCCC------------cEEEEecC-------
Confidence 55444 122221 2233331 12 4668999999999999655 99999985
Q ss_pred cccc-cEEEEEeecCCcEEEEeccCCCcEEEEE
Q 001070 273 VEEA-FFNQVVVLSQAGLLLFANAKKNAIYSVH 304 (1165)
Q Consensus 273 ~~~a-ff~sV~~~p~a~~ilLan~~r~aIYalh 304 (1165)
|.+ .+..|+++|++.+|+-+. .-+.||.-+
T Consensus 324 -H~~~vvs~vafSPDG~~LaSGS-~D~TIklWd 354 (356)
T 2w18_A 324 -VSDQHWSFVKWSGTDSHLLAGQ-KDGNIFVYH 354 (356)
T ss_dssp -C--CCCCEEEECSSSSEEEEEC-TTSCEEEEE
T ss_pred -CCCCeEEEEEECCCCCEEEEEE-CCCcEEEec
Confidence 444 444689999999977665 446676654
No 34
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.17 E-value=4.5e-10 Score=121.58 Aligned_cols=167 Identities=14% Similarity=0.162 Sum_probs=117.4
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCC--Cc
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQ--PV 210 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~--sV 210 (1165)
||+||++|..||.|||||+.+ .....|+||.. |+|||.+++.++..++.|.++ .|
T Consensus 150 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v 229 (420)
T 3vl1_A 150 SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGV 229 (420)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCc
Confidence 689999999999999999998 55667899988 999999999999999876543 67
Q ss_pred ceeEeecCCC----------------CCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccc
Q 001070 211 NSAQYLTAPN----------------QAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVE 274 (1165)
Q Consensus 211 ~SVaFl~aP~----------------~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~ 274 (1165)
.+++|..... .+++.+|+ +|+.|++|+|||+..+ ++..++.. +|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~i~d~~~~------------~~~~~~~~-------~~ 289 (420)
T 3vl1_A 230 NSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVI-AGHVSGVITVHNVFSK------------EQTIQLPS-------KF 289 (420)
T ss_dssp EEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEE-EEETTSCEEEEETTTC------------CEEEEECC-------TT
T ss_pred cEEEEecCCcceeeecccCcccceEEcCCCCEEE-EEcCCCeEEEEECCCC------------ceeEEccc-------cc
Confidence 7777742110 24556565 5889999999998544 66666653 45
Q ss_pred cccEEEEEeecCCcEEEEeccCCCcEEEEEeecCCCccccccccccccc--cccceeeeeeccCC------CCcceEEEE
Q 001070 275 EAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFT--VTMPVLSFTGTIDP------PSEHIIKLY 346 (1165)
Q Consensus 275 ~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~--v~~PILSft~~~d~------~ge~~vq~y 346 (1165)
..-+..++++|++..+|++......||...+..+..+ +..|. -..+|-++... ++ ...+.|++|
T Consensus 290 ~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~-------~~~~~~~~~~~v~~~~~~-~~~~l~s~~~d~~v~iw 361 (420)
T 3vl1_A 290 TCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP-------VGEFLINEGTPINNVYFA-AGALFVSSGFDTSIKLD 361 (420)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC-------SEEEEESTTSCEEEEEEE-TTEEEEEETTTEEEEEE
T ss_pred CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc-------hhhhhccCCCCceEEEeC-CCCEEEEecCCccEEEE
Confidence 6778899999999944445555678888877654321 12222 13344444222 22 234679999
Q ss_pred Eeeh
Q 001070 347 CVQT 350 (1165)
Q Consensus 347 CvQt 350 (1165)
.+.+
T Consensus 362 ~~~~ 365 (420)
T 3vl1_A 362 IISD 365 (420)
T ss_dssp EECC
T ss_pred eccC
Confidence 8876
No 35
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.16 E-value=4.5e-10 Score=120.96 Aligned_cols=164 Identities=15% Similarity=0.146 Sum_probs=119.9
Q ss_pred cC-ceEEEeecCCcEEEEeCcc-hhhHhhc--CCcc-----------------------EEEeecCCCceeEEecCCCC-
Q 001070 156 NK-HYVCYGLKGGNVRVLNLNT-ATRSLLR--GHTK-----------------------IKIWEDSKVAPLIILKPHGG- 207 (1165)
Q Consensus 156 n~-~yIayG~kdg~IRVwdi~t-~ir~llr--GH~q-----------------------VriWD~~~g~pl~~lephdG- 207 (1165)
|| +||++|..||.|||||+.+ .....++ ||.. |+|||.++ ..+..+..|.+
T Consensus 84 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~ 162 (383)
T 3ei3_B 84 THPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSW 162 (383)
T ss_dssp SCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCS
T ss_pred CCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCC
Confidence 46 8999999999999999997 4444444 7876 99999985 55788887765
Q ss_pred -CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecC
Q 001070 208 -QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQ 286 (1165)
Q Consensus 208 -~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~ 286 (1165)
..|++++|. |++ .+|+ +|+.|++|++||+. .+|+.++.. |...+..++++|+
T Consensus 163 ~~~v~~~~~~--~~~---~~l~-~~~~d~~i~i~d~~-------------~~~~~~~~~--------h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 163 DYWYCCVDVS--VSR---QMLA-TGDSTGRLLLLGLD-------------GHEIFKEKL--------HKAKVTHAEFNPR 215 (383)
T ss_dssp SCCEEEEEEE--TTT---TEEE-EEETTSEEEEEETT-------------SCEEEEEEC--------SSSCEEEEEECSS
T ss_pred CCCeEEEEEC--CCC---CEEE-EECCCCCEEEEECC-------------CCEEEEecc--------CCCcEEEEEECCC
Confidence 479999994 544 4455 58899999999972 268889884 6778889999999
Q ss_pred CcEEEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeecc-CC------CCcceEEEEEeehh
Q 001070 287 AGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTI-DP------PSEHIIKLYCVQTQ 351 (1165)
Q Consensus 287 a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~-d~------~ge~~vq~yCvQtq 351 (1165)
+.++|++......|+...+..+.... ..+..|.-..+|.++.... ++ ...+.|++|-+.+.
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRNIKDKN----SYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGGCCSTT----CEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred CCCEEEEEeCCCEEEEEeCCCCCccc----ceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 99666666677788888887644321 2233334556777776655 44 23457888866543
No 36
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.16 E-value=1.4e-10 Score=124.44 Aligned_cols=130 Identities=15% Similarity=0.315 Sum_probs=93.7
Q ss_pred EeeecCceEEEeecCCcEEEEeCcc---hhhHhh-cC-Ccc----------------------EEEeecCC-------Cc
Q 001070 152 QIAVNKHYVCYGLKGGNVRVLNLNT---ATRSLL-RG-HTK----------------------IKIWEDSK-------VA 197 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg~IRVwdi~t---~ir~ll-rG-H~q----------------------VriWD~~~-------g~ 197 (1165)
-++.++.+|++|..||.|||||+.+ .....| .+ |.. |||||... +.
T Consensus 19 ~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~ 98 (330)
T 2hes_X 19 SFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMD 98 (330)
T ss_dssp EEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCE
T ss_pred eeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccce
Confidence 3566677999999999999999986 223334 44 877 99999853 34
Q ss_pred eeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcccccc
Q 001070 198 PLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAF 277 (1165)
Q Consensus 198 pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~af 277 (1165)
++.++++|. ..|++|+| +|++ .+|+ +|+.|++|+|||+... ...++|+.+|.. |...
T Consensus 99 ~~~~~~~h~-~~V~~v~~--sp~g---~~la-s~s~D~~v~iwd~~~~--------~~~~~~~~~~~~--------h~~~ 155 (330)
T 2hes_X 99 LLAIIEGHE-NEVKGVAW--SNDG---YYLA-TCSRDKSVWIWETDES--------GEEYECISVLQE--------HSQD 155 (330)
T ss_dssp EEEEEC-----CEEEEEE--CTTS---CEEE-EEETTSCEEEEECCTT--------CCCCEEEEEECC--------CSSC
T ss_pred eEEEEcCCC-CcEEEEEE--CCCC---CEEE-EEeCCCEEEEEeccCC--------CCCeEEEEEecc--------CCCc
Confidence 688899885 48999999 4554 5455 6889999999998432 135689999984 7778
Q ss_pred EEEEEeecCCcEEEEeccCCCcEEEEEe
Q 001070 278 FNQVVVLSQAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 278 f~sV~~~p~a~~ilLan~~r~aIYalhl 305 (1165)
+..|+.+|++.+|+-+...+ .|+...+
T Consensus 156 v~~v~~~p~~~~l~s~s~D~-~i~iW~~ 182 (330)
T 2hes_X 156 VKHVIWHPSEALLASSSYDD-TVRIWKD 182 (330)
T ss_dssp EEEEEECSSSSEEEEEETTS-CEEEEEE
T ss_pred eEEEEECCCCCEEEEEcCCC-eEEEEEC
Confidence 89999999999887776554 4444433
No 37
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.16 E-value=5.8e-10 Score=123.24 Aligned_cols=160 Identities=18% Similarity=0.350 Sum_probs=107.0
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc-----------------------------------------------
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------------------------------- 187 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------------------------------- 187 (1165)
||+||++|..||.|||||+.+ .....++||+.
T Consensus 158 dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~ 237 (420)
T 4gga_A 158 EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLR 237 (420)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEE
T ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeee
Confidence 678888888888888888877 44445666665
Q ss_pred ----------------EEEeecCCCc----eeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCC
Q 001070 188 ----------------IKIWEDSKVA----PLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEG 247 (1165)
Q Consensus 188 ----------------VriWD~~~g~----pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~ 247 (1165)
|+|||..++. ++..+..|. ..|.+++| .|++.. .+.+.+|+.|++|||||+.++
T Consensus 238 ~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~-~~V~~~~~--~p~~~~-~la~~~gs~D~~I~iwd~~t~-- 311 (420)
T 4gga_A 238 WAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ-GAVKAVAW--CPWQSN-VLATGGGTSDRHIRIWNVCSG-- 311 (420)
T ss_dssp ECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCS-SCEEEEEE--CTTCTT-EEEEEECTTTCEEEEEETTTT--
T ss_pred ecCCCCeeeeeeccccceEEeeccccccceeeeeecccC-Cceeeeee--CCCccc-EEEEEeecCCCEEEEEeCCcc--
Confidence 6666665542 355565554 37899999 577666 324456899999999998544
Q ss_pred CCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEecc-CCCcEEEEEeecCCCcccccccccccccc-c
Q 001070 248 WSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANA-KKNAIYSVHLGYGNNSAATRIDYIAEFTV-T 325 (1165)
Q Consensus 248 ~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~-~r~aIYalhl~~g~~~~~~r~dyiaeF~v-~ 325 (1165)
.|..++.. ...+..++..|+++.|+++.. ..+.||...+..+ .-+.+|.- .
T Consensus 312 ----------~~~~~~~~---------~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~--------~~v~~l~gH~ 364 (420)
T 4gga_A 312 ----------ACLSAVDA---------HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM--------AKVAELKGHT 364 (420)
T ss_dssp ----------EEEEEEEC---------SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC--------CEEEEECCCS
T ss_pred ----------ccceeecc---------ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC--------cEEEEEcCCC
Confidence 89999884 244568889999999988754 5677887765421 22334432 3
Q ss_pred cceeeeeeccCC------CCcceEEEEEe
Q 001070 326 MPVLSFTGTIDP------PSEHIIKLYCV 348 (1165)
Q Consensus 326 ~PILSft~~~d~------~ge~~vq~yCv 348 (1165)
.+|+++....|+ .+.+.|+++=+
T Consensus 365 ~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 365 SRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 467777665544 12346777744
No 38
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.16 E-value=3.6e-10 Score=123.80 Aligned_cols=161 Identities=15% Similarity=0.185 Sum_probs=122.0
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc--------------------EEEeecC-CCceeEEecCCCCCCccee
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK--------------------IKIWEDS-KVAPLIILKPHGGQPVNSA 213 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q--------------------VriWD~~-~g~pl~~lephdG~sV~SV 213 (1165)
||+||++|..||.|+|||+.+ .....+.||.. |+|||.+ .+.++..+..|.| .|.++
T Consensus 145 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~v~~~ 223 (401)
T 4aez_A 145 DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSS-EVCGL 223 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS-CEEEE
T ss_pred CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCC-CeeEE
Confidence 799999999999999999998 66667889986 9999999 5677999999864 89999
Q ss_pred EeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEe
Q 001070 214 QYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFA 293 (1165)
Q Consensus 214 aFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLa 293 (1165)
+|. |+ +.+|+ +|+.|++|++||+.. +.|+.++.. |...+..++++|++..++++
T Consensus 224 ~~~--~~---~~~l~-s~~~d~~v~iwd~~~------------~~~~~~~~~--------~~~~v~~~~~~p~~~~ll~~ 277 (401)
T 4aez_A 224 AWR--SD---GLQLA-SGGNDNVVQIWDARS------------SIPKFTKTN--------HNAAVKAVAWCPWQSNLLAT 277 (401)
T ss_dssp EEC--TT---SSEEE-EEETTSCEEEEETTC------------SSEEEEECC--------CSSCCCEEEECTTSTTEEEE
T ss_pred EEc--CC---CCEEE-EEeCCCeEEEccCCC------------CCccEEecC--------CcceEEEEEECCCCCCEEEE
Confidence 994 54 34455 588999999999854 378888873 56777899999998877776
Q ss_pred cc--CCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC------CC--cceEEEEEeehh
Q 001070 294 NA--KKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP------PS--EHIIKLYCVQTQ 351 (1165)
Q Consensus 294 n~--~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~------~g--e~~vq~yCvQtq 351 (1165)
.. ....|+...+..+. .+..|....+|.++....++ .| .+.|++|-+.+.
T Consensus 278 ~~gs~d~~i~i~d~~~~~--------~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 278 GGGTMDKQIHFWNAATGA--------RVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp ECCTTTCEEEEEETTTCC--------EEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred ecCCCCCEEEEEECCCCC--------EEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 43 67778888776432 23344455667666655544 13 567899987764
No 39
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.16 E-value=3.4e-10 Score=123.26 Aligned_cols=128 Identities=17% Similarity=0.234 Sum_probs=99.8
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-------hhhHhhcCCcc----------------------EEEeecCCCceeEEec
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-------ATRSLLRGHTK----------------------IKIWEDSKVAPLIILK 203 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-------~ir~llrGH~q----------------------VriWD~~~g~pl~~le 203 (1165)
++.+|++|++|..||.|+||++.. .....+.+|+. |||||++++.++.+|.
T Consensus 114 ~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~ 193 (354)
T 2pbi_B 114 YAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH 193 (354)
T ss_dssp ECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc
Confidence 455899999999999999999864 23345667765 9999999999999999
Q ss_pred CCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEe
Q 001070 204 PHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVV 283 (1165)
Q Consensus 204 phdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~ 283 (1165)
+|. ..|.+++|. |+.. +. ++.+|+.|++|++||+..+ +|+++|+. |...++.|++
T Consensus 194 ~h~-~~v~~~~~~--~~~~-g~-~l~sgs~Dg~v~~wd~~~~------------~~~~~~~~--------h~~~v~~v~~ 248 (354)
T 2pbi_B 194 GHG-ADVLCLDLA--PSET-GN-TFVSGGCDKKAMVWDMRSG------------QCVQAFET--------HESDVNSVRY 248 (354)
T ss_dssp CCS-SCEEEEEEC--CCSS-CC-EEEEEETTSCEEEEETTTC------------CEEEEECC--------CSSCEEEEEE
T ss_pred CCC-CCeEEEEEE--eCCC-CC-EEEEEeCCCeEEEEECCCC------------cEEEEecC--------CCCCeEEEEE
Confidence 985 589999994 4422 23 3446889999999998543 89999984 6778899999
Q ss_pred ecCCcEEEEeccCCCcEEEEEee
Q 001070 284 LSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 284 ~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
+|++.+|+.+... ..|+...+.
T Consensus 249 ~p~~~~l~s~s~D-~~v~lwd~~ 270 (354)
T 2pbi_B 249 YPSGDAFASGSDD-ATCRLYDLR 270 (354)
T ss_dssp CTTSSEEEEEETT-SCEEEEETT
T ss_pred eCCCCEEEEEeCC-CeEEEEECC
Confidence 9999988777654 455555543
No 40
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.16 E-value=1.4e-10 Score=124.47 Aligned_cols=129 Identities=9% Similarity=0.063 Sum_probs=90.4
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc-----------------------EEEeecCCCcee-EEecC-CCCCC
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK-----------------------IKIWEDSKVAPL-IILKP-HGGQP 209 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q-----------------------VriWD~~~g~pl-~~lep-hdG~s 209 (1165)
+|+||++|..||.|||||+.+ ....++.+|.. |||||.+++..+ .+|+. |. .+
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~-~~ 216 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEE-AK 216 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTT-SC
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCC-CC
Confidence 789999999999999999998 44334434433 999999999877 88988 75 49
Q ss_pred cceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccE--EEEEeecCC
Q 001070 210 VNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFF--NQVVVLSQA 287 (1165)
Q Consensus 210 V~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff--~sV~~~p~a 287 (1165)
|++|+| .|++ .+|++++ .| +|+|||+... +|++++..... +..-+ ..++++|++
T Consensus 217 v~~l~f--s~~g---~~l~s~~-~~-~v~iwd~~~~------------~~~~~~~~~~~-----~~~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 217 IKEVKF--ADNG---YWMVVEC-DQ-TVVCFDLRKD------------VGTLAYPTYTI-----PEFKTGTVTYDIDDSG 272 (343)
T ss_dssp EEEEEE--CTTS---SEEEEEE-SS-BEEEEETTSS------------TTCBSSCCCBC----------CCEEEEECTTS
T ss_pred EEEEEE--eCCC---CEEEEEe-CC-eEEEEEcCCC------------Ccceeeccccc-----ccccccceEEEECCCC
Confidence 999999 4544 5577655 44 9999998554 44444331100 11111 358999999
Q ss_pred cEEEEeccCCCcEEEEEeecCC
Q 001070 288 GLLLFANAKKNAIYSVHLGYGN 309 (1165)
Q Consensus 288 ~~ilLan~~r~aIYalhl~~g~ 309 (1165)
.+|+.+....+.|+...++.+.
T Consensus 273 ~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 273 KNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTT
T ss_pred CEEEEecCCCCcEEEEEEcccc
Confidence 9999977655667777776543
No 41
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.15 E-value=1.5e-10 Score=125.32 Aligned_cols=126 Identities=14% Similarity=0.170 Sum_probs=101.8
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc---------------------EEEeecCCCceeEEecCCCCCCc
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK---------------------IKIWEDSKVAPLIILKPHGGQPV 210 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q---------------------VriWD~~~g~pl~~lephdG~sV 210 (1165)
+.-||+||++|..||.|||||+.+ .....+.+|.- |+|||..++.++..+.+|. ..|
T Consensus 64 ~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-~~v 142 (420)
T 3vl1_A 64 FEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV-SEI 142 (420)
T ss_dssp EEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSS-SCE
T ss_pred eeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccccc-Ccc
Confidence 555799999999999999999998 66667777754 9999999999899998885 499
Q ss_pred ceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEE
Q 001070 211 NSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLL 290 (1165)
Q Consensus 211 ~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~i 290 (1165)
++++| .|++ .+|+ +|+.|++|+|||+..+ +|+++|.. |...+..++++|++.+|
T Consensus 143 ~~~~~--~~~~---~~l~-s~s~d~~i~iwd~~~~------------~~~~~~~~--------h~~~v~~~~~~~~~~~l 196 (420)
T 3vl1_A 143 TKLKF--FPSG---EALI-SSSQDMQLKIWSVKDG------------SNPRTLIG--------HRATVTDIAIIDRGRNV 196 (420)
T ss_dssp EEEEE--CTTS---SEEE-EEETTSEEEEEETTTC------------CCCEEEEC--------CSSCEEEEEEETTTTEE
T ss_pred EEEEE--CCCC---CEEE-EEeCCCeEEEEeCCCC------------cCceEEcC--------CCCcEEEEEEcCCCCEE
Confidence 99999 4554 4455 6889999999998544 78888874 67888899999999988
Q ss_pred EEeccCCCcEEEEEee
Q 001070 291 LFANAKKNAIYSVHLG 306 (1165)
Q Consensus 291 lLan~~r~aIYalhl~ 306 (1165)
+.+... ..|+...+.
T Consensus 197 ~s~~~d-~~v~iwd~~ 211 (420)
T 3vl1_A 197 LSASLD-GTIRLWECG 211 (420)
T ss_dssp EEEETT-SCEEEEETT
T ss_pred EEEcCC-CcEEEeECC
Confidence 876654 456555544
No 42
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.15 E-value=1.5e-10 Score=125.93 Aligned_cols=116 Identities=10% Similarity=0.093 Sum_probs=94.7
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCC-CCcc
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGG-QPVN 211 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG-~sV~ 211 (1165)
+|++|++|..||.|||||+.+ .....|.+|+. |||||.+++..+..+..+.. ..|.
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~ 288 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGAS 288 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCccccee
Confidence 478999999999999999998 55567899987 99999999988888876532 3789
Q ss_pred eeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEE
Q 001070 212 SAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLL 291 (1165)
Q Consensus 212 SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~il 291 (1165)
+++| +|++ .+|+ +|+.|++|+|||+..+ .|+.+|. +|...+..++++|++.+|+
T Consensus 289 ~~~~--s~~g---~~l~-~g~~d~~i~vwd~~~~------------~~~~~l~--------~h~~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 289 SVDF--SLSG---RLLF-AGYNDYTINVWDVLKG------------SRVSILF--------GHENRVSTLRVSPDGTAFC 342 (354)
T ss_dssp EEEE--CTTS---SEEE-EEETTSCEEEEETTTC------------SEEEEEC--------CCSSCEEEEEECTTSSCEE
T ss_pred EEEE--eCCC---CEEE-EEECCCcEEEEECCCC------------ceEEEEE--------CCCCcEEEEEECCCCCEEE
Confidence 9999 4544 5455 5889999999998443 7888887 4778889999999999988
Q ss_pred EeccCC
Q 001070 292 FANAKK 297 (1165)
Q Consensus 292 Lan~~r 297 (1165)
.+...+
T Consensus 343 sgs~D~ 348 (354)
T 2pbi_B 343 SGSWDH 348 (354)
T ss_dssp EEETTS
T ss_pred EEcCCC
Confidence 877654
No 43
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.15 E-value=1.7e-09 Score=112.03 Aligned_cols=160 Identities=11% Similarity=0.146 Sum_probs=115.6
Q ss_pred ecCceEEEeecCCcEEEEeCcc-h--hhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCC
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNT-A--TRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQP 209 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t-~--ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~s 209 (1165)
-||+||++|..||.|+|||+.+ . ....+.+|.. |+|||.+++.++.+++.|. ..
T Consensus 107 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~-~~ 185 (337)
T 1gxr_A 107 PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-DG 185 (337)
T ss_dssp TTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-SC
T ss_pred CCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeeccc-Cc
Confidence 3699999999999999999998 3 4557788876 9999999999999999885 48
Q ss_pred cceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcE
Q 001070 210 VNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGL 289 (1165)
Q Consensus 210 V~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ 289 (1165)
|.+++| .|++ .+|+ +|+.|++|++||+..+ +|+.++.+ ..-+..++++|++.+
T Consensus 186 i~~~~~--~~~~---~~l~-~~~~dg~i~~~d~~~~------------~~~~~~~~---------~~~v~~~~~s~~~~~ 238 (337)
T 1gxr_A 186 ASCIDI--SNDG---TKLW-TGGLDNTVRSWDLREG------------RQLQQHDF---------TSQIFSLGYCPTGEW 238 (337)
T ss_dssp EEEEEE--CTTS---SEEE-EEETTSEEEEEETTTT------------EEEEEEEC---------SSCEEEEEECTTSSE
T ss_pred eEEEEE--CCCC---CEEE-EEecCCcEEEEECCCC------------ceEeeecC---------CCceEEEEECCCCCE
Confidence 999999 4544 4455 5779999999998543 78888763 344668999999999
Q ss_pred EEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC------CCcceEEEEEeehh
Q 001070 290 LLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP------PSEHIIKLYCVQTQ 351 (1165)
Q Consensus 290 ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~------~ge~~vq~yCvQtq 351 (1165)
|+.+... ..||...+..+.- + .-..-..+|.++....++ ...+.|++|-+.+.
T Consensus 239 l~~~~~~-~~i~~~~~~~~~~-----~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 239 LAVGMES-SNVEVLHVNKPDK-----Y---QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp EEEEETT-SCEEEEETTSSCE-----E---EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEcCC-CcEEEEECCCCCe-----E---EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence 8888654 5688877764321 1 112234456555554444 23456777766543
No 44
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.15 E-value=8e-10 Score=116.38 Aligned_cols=172 Identities=14% Similarity=0.162 Sum_probs=120.1
Q ss_pred CceEEEeecCCcEEEEeCcch---hhHhhcCCcc------------------------EEEeecCCC--ceeEEecCCCC
Q 001070 157 KHYVCYGLKGGNVRVLNLNTA---TRSLLRGHTK------------------------IKIWEDSKV--APLIILKPHGG 207 (1165)
Q Consensus 157 ~~yIayG~kdg~IRVwdi~t~---ir~llrGH~q------------------------VriWD~~~g--~pl~~lephdG 207 (1165)
++||++|..||.|||||+.+. ....+.+|.. |+|||.+++ .....+..|.
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~- 147 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA- 147 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCT-
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCC-
Confidence 899999999999999999983 5557777765 999999887 3455677774
Q ss_pred CCcceeEeecCCCC----------CCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcccccc
Q 001070 208 QPVNSAQYLTAPNQ----------AGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAF 277 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~----------~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~af 277 (1165)
..|++++|. |.. +++.+++ +|+.|++|+|||+..+. ..|.|..++.. |...
T Consensus 148 ~~v~~~~~~--~~~~~~~~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~--------~~~~~~~~~~~--------h~~~ 208 (379)
T 3jrp_A 148 IGVNSASWA--PATIEEDGEHNGTKESRKFV-TGGADNLVKIWKYNSDA--------QTYVLESTLEG--------HSDW 208 (379)
T ss_dssp TCEEEEEEC--CCC----------CTTCEEE-EEETTSCEEEEEEETTT--------TEEEEEEEECC--------CSSC
T ss_pred CceEEEEEc--CccccccccccCCCCCCEEE-EEeCCCeEEEEEecCCC--------cceeeEEEEec--------ccCc
Confidence 489999994 531 1345455 58899999999986542 35788888884 6778
Q ss_pred EEEEEeecC---CcEEEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC------CCcceEEEEEe
Q 001070 278 FNQVVVLSQ---AGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP------PSEHIIKLYCV 348 (1165)
Q Consensus 278 f~sV~~~p~---a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~------~ge~~vq~yCv 348 (1165)
+..++++|+ +.+|+.+. ....|+...+..+.... ....+.......+|.++....|+ ...+.|++|-+
T Consensus 209 v~~~~~sp~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 209 VRDVAWSPTVLLRSYLASVS-QDRTCIIWTQDNEQGPW--KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp EEEEEECCCCSSSEEEEEEE-TTSCEEEEEESSTTSCC--EEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred EeEEEECCCCCCCCeEEEEe-CCCEEEEEeCCCCCccc--eeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 889999999 66666655 44568888777654321 22223333345566666655544 23456888887
Q ss_pred ehh
Q 001070 349 QTQ 351 (1165)
Q Consensus 349 Qtq 351 (1165)
.+.
T Consensus 286 ~~~ 288 (379)
T 3jrp_A 286 NLE 288 (379)
T ss_dssp EET
T ss_pred CCC
Confidence 753
No 45
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.14 E-value=1.1e-09 Score=122.02 Aligned_cols=134 Identities=16% Similarity=0.286 Sum_probs=106.5
Q ss_pred ccEeee--cCc-eEEEeecCCcEEEEeCcc-hh-------hHhhcCCcc-----------------------EEEeecCC
Q 001070 150 GRQIAV--NKH-YVCYGLKGGNVRVLNLNT-AT-------RSLLRGHTK-----------------------IKIWEDSK 195 (1165)
Q Consensus 150 GR~IAV--n~~-yIayG~kdg~IRVwdi~t-~i-------r~llrGH~q-----------------------VriWD~~~ 195 (1165)
+..|+. +++ +|++|..||.|+|||+.+ .. ...+.+|.. |+|||.++
T Consensus 184 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp CCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred eEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 344555 456 999999999999999987 11 345678875 99999998
Q ss_pred C---ceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCc
Q 001070 196 V---APLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPR 272 (1165)
Q Consensus 196 g---~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~ 272 (1165)
+ .++..+..|+ ..|++++| .|++.. ++++|+.|++|+|||+... ..|+.+|..
T Consensus 264 ~~~~~~~~~~~~~~-~~v~~i~~--~p~~~~---~l~tg~~dg~v~vwd~~~~-----------~~~~~~~~~------- 319 (430)
T 2xyi_A 264 NNTSKPSHTVDAHT-AEVNCLSF--NPYSEF---ILATGSADKTVALWDLRNL-----------KLKLHSFES------- 319 (430)
T ss_dssp SCSSSCSEEEECCS-SCEEEEEE--CSSCTT---EEEEEETTSEEEEEETTCT-----------TSCSEEEEC-------
T ss_pred CCCCcceeEeecCC-CCeEEEEe--CCCCCC---EEEEEeCCCeEEEEeCCCC-----------CCCeEEeec-------
Confidence 7 5788998885 58999999 566544 6667899999999998542 257788884
Q ss_pred cccccEEEEEeecCCcEEEEeccCCCcEEEEEeecC
Q 001070 273 VEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYG 308 (1165)
Q Consensus 273 ~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~g 308 (1165)
|..-+..+.++|++.++|++....+.|+...+...
T Consensus 320 -h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 320 -HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp -CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred -CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 56778899999999988888888888999888763
No 46
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.14 E-value=1.2e-10 Score=127.05 Aligned_cols=127 Identities=9% Similarity=0.086 Sum_probs=94.8
Q ss_pred Eeee--cC-ceEEEeecCCcEEEEeCcc-hhhHh--hcCCcc-----------------------EEEeecCCCceeEEe
Q 001070 152 QIAV--NK-HYVCYGLKGGNVRVLNLNT-ATRSL--LRGHTK-----------------------IKIWEDSKVAPLIIL 202 (1165)
Q Consensus 152 ~IAV--n~-~yIayG~kdg~IRVwdi~t-~ir~l--lrGH~q-----------------------VriWD~~~g~pl~~l 202 (1165)
.|++ ++ .++++|..||.|||||+.+ ..... +..|.. |||||.+++.++..+
T Consensus 186 ~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~ 265 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTS 265 (357)
T ss_dssp EEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEE
T ss_pred EEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEE
Confidence 3554 33 5889999999999999987 32222 233332 999999999999999
Q ss_pred cCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEE
Q 001070 203 KPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVV 282 (1165)
Q Consensus 203 ephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~ 282 (1165)
+.|. ..|++++| +|++.. +|++|+.|++|+|||+.++ +|++++. |.+.++.|+
T Consensus 266 ~~~~-~~v~~l~~--sp~~~~---~lasgs~D~~i~iwd~~~~------------~~~~~~~---------H~~~V~~va 318 (357)
T 4g56_B 266 AVHS-QNITGLAY--SYHSSP---FLASISEDCTVAVLDADFS------------EVFRDLS---------HRDFVTGVA 318 (357)
T ss_dssp CCCS-SCEEEEEE--CSSSSC---CEEEEETTSCEEEECTTSC------------EEEEECC---------CSSCEEEEE
T ss_pred eccc-eeEEEEEE--cCCCCC---EEEEEeCCCEEEEEECCCC------------cEeEECC---------CCCCEEEEE
Confidence 9885 48999999 566543 5667899999999998543 7887653 788999999
Q ss_pred eec-CCcEEEEeccCCCcEEEEEee
Q 001070 283 VLS-QAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 283 ~~p-~a~~ilLan~~r~aIYalhl~ 306 (1165)
.+| ++.+|+-+ ..-..|+.-++.
T Consensus 319 fsP~d~~~l~s~-s~Dg~v~iW~~~ 342 (357)
T 4g56_B 319 WSPLDHSKFTTV-GWDHKVLHHHLP 342 (357)
T ss_dssp ECSSSTTEEEEE-ETTSCEEEEECC
T ss_pred EeCCCCCEEEEE-cCCCeEEEEECC
Confidence 999 55555544 445667777764
No 47
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.14 E-value=1.8e-10 Score=134.64 Aligned_cols=131 Identities=16% Similarity=0.261 Sum_probs=98.1
Q ss_pred cCc-eEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEec-------C
Q 001070 156 NKH-YVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILK-------P 204 (1165)
Q Consensus 156 n~~-yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~le-------p 204 (1165)
|+. +|++|..||.|||||..+ .....|.||+. |||||..+|.++..++ +
T Consensus 158 ~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~ 237 (611)
T 1nr0_A 158 SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVA 237 (611)
T ss_dssp SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCS
T ss_pred CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccc
Confidence 355 599999999999999987 66678999987 9999999999888885 6
Q ss_pred CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCC---------------
Q 001070 205 HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSA--------------- 269 (1165)
Q Consensus 205 hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~--------------- 269 (1165)
|.| .|++|+| .|++ ++|+ +|+.|++|||||+..+ +|++++......
T Consensus 238 h~~-~V~~v~~--spdg---~~l~-s~s~D~~v~lWd~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (611)
T 1nr0_A 238 HSG-SVFGLTW--SPDG---TKIA-SASADKTIKIWNVATL------------KVEKTIPVGTRIEDQQLGIIWTKQALV 298 (611)
T ss_dssp SSS-CEEEEEE--CTTS---SEEE-EEETTSEEEEEETTTT------------EEEEEEECCSSGGGCEEEEEECSSCEE
T ss_pred cCC-CEEEEEE--CCCC---CEEE-EEeCCCeEEEEeCCCC------------ceeeeecCCCCccceeEEEEEcCCEEE
Confidence 754 9999999 4554 5455 6889999999998654 455554421100
Q ss_pred --------------------CCccccccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 270 --------------------KPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 270 --------------------~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
...+|..-+..++++|++.+|+.+...+ .|+...+.
T Consensus 299 s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~-~v~~Wd~~ 354 (611)
T 1nr0_A 299 SISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG-HINSWDIS 354 (611)
T ss_dssp EEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-CEEEEETT
T ss_pred EEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC-cEEEEECC
Confidence 0125777888999999999888776654 56665554
No 48
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.14 E-value=2.5e-10 Score=119.00 Aligned_cols=121 Identities=17% Similarity=0.207 Sum_probs=94.6
Q ss_pred cCceEEEeecCCcEEEEeCcc--hhhHhhcCCcc------------------------EEEeecCCCceeEEecCCCCCC
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT--ATRSLLRGHTK------------------------IKIWEDSKVAPLIILKPHGGQP 209 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t--~ir~llrGH~q------------------------VriWD~~~g~pl~~lephdG~s 209 (1165)
++.+|++|.+||.|+|||+.. .....+.+|.. |||||.+++.++..+.+|.+ .
T Consensus 139 ~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~-~ 217 (340)
T 4aow_A 139 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG-Y 217 (340)
T ss_dssp TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSS-C
T ss_pred cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCC-c
Confidence 578999999999999999987 44446778876 99999999999999999864 8
Q ss_pred cceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcE
Q 001070 210 VNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGL 289 (1165)
Q Consensus 210 V~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ 289 (1165)
|++|+| .|++ .+|+ +|+.|++|+|||+.. ++|+.++.. ...+..+..+|++.+
T Consensus 218 v~~~~~--s~~~---~~l~-s~s~Dg~i~iwd~~~------------~~~~~~~~~---------~~~v~~~~~~~~~~~ 270 (340)
T 4aow_A 218 LNTVTV--SPDG---SLCA-SGGKDGQAMLWDLNE------------GKHLYTLDG---------GDIINALCFSPNRYW 270 (340)
T ss_dssp EEEEEE--CTTS---SEEE-EEETTCEEEEEETTT------------TEEEEEEEC---------SSCEEEEEECSSSSE
T ss_pred EEEEEE--CCCC---CEEE-EEeCCCeEEEEEecc------------CceeeeecC---------CceEEeeecCCCCce
Confidence 999999 4554 5455 588999999999843 488888884 345678888998877
Q ss_pred EEEeccCCCcEEEEEee
Q 001070 290 LLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 290 ilLan~~r~aIYalhl~ 306 (1165)
+..+. ...|+...+.
T Consensus 271 ~~~~~--d~~i~iwd~~ 285 (340)
T 4aow_A 271 LCAAT--GPSIKIWDLE 285 (340)
T ss_dssp EEEEE--TTEEEEEETT
T ss_pred eeccC--CCEEEEEECC
Confidence 66554 4556665543
No 49
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.14 E-value=7.3e-10 Score=116.67 Aligned_cols=168 Identities=12% Similarity=0.145 Sum_probs=114.9
Q ss_pred ecCceEEEeecCCcEEEEeCc--c-hhhHhhcCCcc------------------------EEEeecCCCc--eeEEecCC
Q 001070 155 VNKHYVCYGLKGGNVRVLNLN--T-ATRSLLRGHTK------------------------IKIWEDSKVA--PLIILKPH 205 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~--t-~ir~llrGH~q------------------------VriWD~~~g~--pl~~leph 205 (1165)
-||+||++|..||.|+|||+. + .....|+||.. |+|||..++. ++..+..|
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 100 (379)
T 3jrp_A 21 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH 100 (379)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCC
Confidence 368999999999999999998 4 55567889987 9999999986 68888887
Q ss_pred CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeec
Q 001070 206 GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS 285 (1165)
Q Consensus 206 dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p 285 (1165)
. ..|++++| .|+.. +.+|+ +|+.|++|++||+..... .+..++. +|...+..++.+|
T Consensus 101 ~-~~v~~~~~--~~~~~-~~~l~-~~~~d~~i~v~d~~~~~~----------~~~~~~~--------~~~~~v~~~~~~~ 157 (379)
T 3jrp_A 101 S-ASVNSVQW--APHEY-GPLLL-VASSDGKVSVVEFKENGT----------TSPIIID--------AHAIGVNSASWAP 157 (379)
T ss_dssp S-SCEEEEEE--CCGGG-CSEEE-EEETTSEEEEEECCTTSC----------CCEEEEE--------CCTTCEEEEEECC
T ss_pred C-cceEEEEe--CCCCC-CCEEE-EecCCCcEEEEecCCCCc----------eeeEEec--------CCCCceEEEEEcC
Confidence 4 58999999 45521 23344 588999999999865421 3334444 3566788899999
Q ss_pred -------------CCcEEEEeccCCCcEEEEEeecCCCcccccccccccccc-ccceeeeeeccC---C------CCcce
Q 001070 286 -------------QAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTV-TMPVLSFTGTID---P------PSEHI 342 (1165)
Q Consensus 286 -------------~a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v-~~PILSft~~~d---~------~ge~~ 342 (1165)
++.+|+.+... ..||...+..+... +..+..|.- ..+|.++....+ + ...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~----~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRKFVTGGAD-NLVKIWKYNSDAQT----YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp CC----------CTTCEEEEEETT-SCEEEEEEETTTTE----EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred ccccccccccCCCCCCEEEEEeCC-CeEEEEEecCCCcc----eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE
Confidence 57776666554 56888777654331 122222221 345666655544 3 23456
Q ss_pred EEEEEeeh
Q 001070 343 IKLYCVQT 350 (1165)
Q Consensus 343 vq~yCvQt 350 (1165)
|++|-+.+
T Consensus 233 i~iwd~~~ 240 (379)
T 3jrp_A 233 CIIWTQDN 240 (379)
T ss_dssp EEEEEESS
T ss_pred EEEEeCCC
Confidence 88887765
No 50
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.13 E-value=1.9e-09 Score=114.71 Aligned_cols=136 Identities=16% Similarity=0.207 Sum_probs=99.7
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc------------------------EEEeecCCCceeEEecCCCCCCc
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK------------------------IKIWEDSKVAPLIILKPHGGQPV 210 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q------------------------VriWD~~~g~pl~~lephdG~sV 210 (1165)
++.+|++|..||.|+|||+.+ .....+..+.. |+|||.+++.++..+..|.+ .|
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~v 189 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQ-EI 189 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCS-CE
T ss_pred CCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCC-cE
Confidence 578999999999999999987 33333332111 99999999999999998854 89
Q ss_pred ceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCC-------CCccccccEEEEEe
Q 001070 211 NSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSA-------KPRVEEAFFNQVVV 283 (1165)
Q Consensus 211 ~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~-------~~~~~~aff~sV~~ 283 (1165)
.+++| .|++.. ++++|+.|++|++||+.... .|..++...... ...+|...+..+++
T Consensus 190 ~~~~~--~~~~~~---ll~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 190 LAVSW--SPRYDY---ILATASADSRVKLWDVRRAS-----------GCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp EEEEE--CSSCTT---EEEEEETTSCEEEEETTCSS-----------CCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred EEEEE--CCCCCc---EEEEEcCCCcEEEEECCCCC-----------cccccccccccccceeeccccccccCceeEEEE
Confidence 99999 466543 66678999999999986553 355555432211 11357788889999
Q ss_pred ecCCcEEEEeccCCCcEEEEEeecCC
Q 001070 284 LSQAGLLLFANAKKNAIYSVHLGYGN 309 (1165)
Q Consensus 284 ~p~a~~ilLan~~r~aIYalhl~~g~ 309 (1165)
+|++.+|+.+... ..|+...+..+.
T Consensus 254 ~~~~~~l~~~~~d-g~i~vwd~~~~~ 278 (408)
T 4a11_B 254 TSDGLHLLTVGTD-NRMRLWNSSNGE 278 (408)
T ss_dssp CTTSSEEEEEETT-SCEEEEETTTCC
T ss_pred cCCCCEEEEecCC-CeEEEEECCCCc
Confidence 9999998877655 457777766443
No 51
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.13 E-value=2.6e-10 Score=125.98 Aligned_cols=142 Identities=16% Similarity=0.215 Sum_probs=104.7
Q ss_pred EeeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc---------------------EEEeecCCCceeEEecCCCCCC
Q 001070 152 QIAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK---------------------IKIWEDSKVAPLIILKPHGGQP 209 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q---------------------VriWD~~~g~pl~~lephdG~s 209 (1165)
-++.+++||++|..||.|||||+.+ .....|.||+. |+|||.+++.++.++.+|. ..
T Consensus 127 ~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~-~~ 205 (464)
T 3v7d_B 127 CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHN-ST 205 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCS-SC
T ss_pred EEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCC-Cc
Confidence 4777999999999999999999998 66668889987 9999999999999999885 49
Q ss_pred cceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCC---------------------------------------
Q 001070 210 VNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSL--------------------------------------- 250 (1165)
Q Consensus 210 V~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~--------------------------------------- 250 (1165)
|.+++|...+++ .+++ +|+.|++|++||+........
T Consensus 206 v~~l~~~~~~~~---~~l~-s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 281 (464)
T 3v7d_B 206 VRCLDIVEYKNI---KYIV-TGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGN 281 (464)
T ss_dssp EEEEEEEESSSC---EEEE-EEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETT
T ss_pred cEEEEEecCCCC---CEEE-EEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCC
Confidence 999999644433 4355 588999999999876532100
Q ss_pred ---C--CCC-------CCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 251 ---P--THA-------ESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 251 ---~--~~~-------~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
- .++ ..++|+.++. +|...+..++++|++.+|+.+... ..||...+..
T Consensus 282 ~l~~~~~d~~i~vwd~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~sg~~d-g~i~vwd~~~ 341 (464)
T 3v7d_B 282 IVVSGSYDNTLIVWDVAQMKCLYILS--------GHTDRIYSTIYDHERKRCISASMD-TTIRIWDLEN 341 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEEC--------CCSSCEEEEEEETTTTEEEEEETT-SCEEEEETTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEec--------CCCCCEEEEEEcCCCCEEEEEeCC-CcEEEEECCC
Confidence 0 000 1234555544 466778889999999888776654 4566666543
No 52
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.13 E-value=4.5e-10 Score=120.76 Aligned_cols=169 Identities=15% Similarity=0.165 Sum_probs=116.2
Q ss_pred ecCceEEEeecCCcEEEEeCcc-----hhhHhhcCCcc-----------------------EEEeecCCCc------ee-
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNT-----ATRSLLRGHTK-----------------------IKIWEDSKVA------PL- 199 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t-----~ir~llrGH~q-----------------------VriWD~~~g~------pl- 199 (1165)
-||+||++|..||.|||||+.+ .....|.||.. |+|||..++. ..
T Consensus 77 ~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 156 (416)
T 2pm9_A 77 HNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPL 156 (416)
T ss_dssp SSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCB
T ss_pred CCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccc
Confidence 4799999999999999999997 35567889987 9999999875 22
Q ss_pred --EEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcccccc
Q 001070 200 --IILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAF 277 (1165)
Q Consensus 200 --~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~af 277 (1165)
..+..|. ..|++++| .|++.. ++++|+.|++|+|||+..+ +|+.++.++.... +|...
T Consensus 157 ~~~~~~~~~-~~v~~~~~--~~~~~~---~l~~~~~dg~v~iwd~~~~------------~~~~~~~~~~~~~--~~~~~ 216 (416)
T 2pm9_A 157 TPGQSMSSV-DEVISLAW--NQSLAH---VFASAGSSNFASIWDLKAK------------KEVIHLSYTSPNS--GIKQQ 216 (416)
T ss_dssp CCCCSCCSS-CCCCEEEE--CSSCTT---EEEEESSSSCEEEEETTTT------------EEEEEECCCCCSS--CCCCC
T ss_pred ccccccCCC-CCeeEEEe--CCCCCc---EEEEEcCCCCEEEEECCCC------------CcceEEecccccc--ccCCc
Confidence 2335553 48999999 466433 4556889999999998544 8999998754322 34678
Q ss_pred EEEEEeecCCc-EEEEeccCC--CcEEEEEeecCCCccccccccccccc--cccceeeeeecc-CC------CCcceEEE
Q 001070 278 FNQVVVLSQAG-LLLFANAKK--NAIYSVHLGYGNNSAATRIDYIAEFT--VTMPVLSFTGTI-DP------PSEHIIKL 345 (1165)
Q Consensus 278 f~sV~~~p~a~-~ilLan~~r--~aIYalhl~~g~~~~~~r~dyiaeF~--v~~PILSft~~~-d~------~ge~~vq~ 345 (1165)
+..++++|++. +|+.+.... ..||...+..+... +..|. -..+|.++.-.. ++ ...+.|++
T Consensus 217 v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~ 289 (416)
T 2pm9_A 217 LSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP-------LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLL 289 (416)
T ss_dssp EEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-------SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEE
T ss_pred eEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-------cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEE
Confidence 88999999986 455444432 17887777654321 12222 345666665543 33 23456888
Q ss_pred EEeeh
Q 001070 346 YCVQT 350 (1165)
Q Consensus 346 yCvQt 350 (1165)
|-+.+
T Consensus 290 wd~~~ 294 (416)
T 2pm9_A 290 WNPES 294 (416)
T ss_dssp ECSSS
T ss_pred eeCCC
Confidence 87654
No 53
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.12 E-value=6.5e-10 Score=121.00 Aligned_cols=134 Identities=9% Similarity=0.128 Sum_probs=93.7
Q ss_pred ceEEEeecCCcEEEEeCcc-hh----------------------------------------hHhhcCCcc---------
Q 001070 158 HYVCYGLKGGNVRVLNLNT-AT----------------------------------------RSLLRGHTK--------- 187 (1165)
Q Consensus 158 ~yIayG~kdg~IRVwdi~t-~i----------------------------------------r~llrGH~q--------- 187 (1165)
.+|++|..||.|||||+.+ .. +.++.||+.
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 7899999999999999987 21 133578877
Q ss_pred ------------EEEeecCC-CceeEE-------ecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCC
Q 001070 188 ------------IKIWEDSK-VAPLII-------LKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEG 247 (1165)
Q Consensus 188 ------------VriWD~~~-g~pl~~-------lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~ 247 (1165)
|+|||.++ +.++.. +..|. ..|++++| .|+++. ++++|+.|++|+|||+..++-
T Consensus 188 ~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--~p~~~~---~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 188 DYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELT-EVITAAEF--HPNSCN---TFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp TSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCC-CCEEEEEE--CSSCTT---EEEEEETTSCEEEEETTTCSS
T ss_pred CCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccC-cceEEEEE--CCCCCc---EEEEEeCCCeEEEEECcCCcc
Confidence 99999984 555553 55663 48999999 566544 455788999999999865521
Q ss_pred CCCCCCCCCcceEEEEeccCCCC----CccccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 248 WSLPTHAESWKCTQTLDLKSSAK----PRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 248 ~~~~~~~~~w~C~QTLe~~~s~~----~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
......+|..+.... ..+|..-+..++++|++.+|+.+.. ..|+...+..
T Consensus 262 --------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~ 315 (447)
T 3dw8_B 262 --------CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNM 315 (447)
T ss_dssp --------SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTC
T ss_pred --------ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCC
Confidence 011156776532110 0122237889999999999988776 8888887764
No 54
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.12 E-value=7e-10 Score=122.74 Aligned_cols=136 Identities=16% Similarity=0.200 Sum_probs=102.9
Q ss_pred EeeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc--------------------EEEeecCCCceeEEecCCCC--C
Q 001070 152 QIAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK--------------------IKIWEDSKVAPLIILKPHGG--Q 208 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q--------------------VriWD~~~g~pl~~lephdG--~ 208 (1165)
.++.||+||++|..||.|||||+.+ .....+.||.. |+|||.+++.++..+..+.+ .
T Consensus 284 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 363 (445)
T 2ovr_B 284 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS 363 (445)
T ss_dssp EEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSS
T ss_pred EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCC
Confidence 3666889999999999999999987 55567778876 99999999999999987543 3
Q ss_pred CcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCc
Q 001070 209 PVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAG 288 (1165)
Q Consensus 209 sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~ 288 (1165)
.|++++|- + .+|+ +|+.|++|+|||+..+ +++.++..... .++...+..++++|++.
T Consensus 364 ~v~~~~~~-----~--~~l~-s~~~dg~v~iwd~~~~------------~~~~~~~~~~~---~~~~~~v~~~~~s~~~~ 420 (445)
T 2ovr_B 364 AVTCLQFN-----K--NFVI-TSSDDGTVKLWDLKTG------------EFIRNLVTLES---GGSGGVVWRIRASNTKL 420 (445)
T ss_dssp CEEEEEEC-----S--SEEE-EEETTSEEEEEETTTC------------CEEEEEEECTT---GGGTCEEEEEEECSSEE
T ss_pred CEEEEEEC-----C--CEEE-EEeCCCeEEEEECCCC------------ceeeeeecccc---CCCCceEEEEEecCCEE
Confidence 89999992 2 3344 6889999999998554 78888853211 24678889999999999
Q ss_pred EEEEeccCCC-cEEEEEeecCCC
Q 001070 289 LLLFANAKKN-AIYSVHLGYGNN 310 (1165)
Q Consensus 289 ~ilLan~~r~-aIYalhl~~g~~ 310 (1165)
++..+...+. -.|..-++++.+
T Consensus 421 ~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 421 VCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEECSSSSSCCEEEEEECCCC
T ss_pred EEEEcccCCCCccEEEEEECCCC
Confidence 9999887775 445444554433
No 55
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.11 E-value=2.7e-10 Score=128.89 Aligned_cols=114 Identities=20% Similarity=0.303 Sum_probs=94.8
Q ss_pred ecCceEEEeecCCcEEEEeCcchhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCCcce
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNTATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQPVNS 212 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~sV~S 212 (1165)
-|++||++|..||.|+|||+.......|.||.. ||||| .+|.++.++++|+ ..|++
T Consensus 436 ~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~-~~~~~~~~~~~h~-~~v~~ 513 (577)
T 2ymu_A 436 PDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHS-SSVRG 513 (577)
T ss_dssp TTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEE-TTSCEEEEEECCS-SCEEE
T ss_pred CCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEc-CCCCEEEEEeCCC-CCEEE
Confidence 379999999999999999998777778889987 99999 4688899999995 48999
Q ss_pred eEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEE
Q 001070 213 AQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLF 292 (1165)
Q Consensus 213 VaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilL 292 (1165)
|+| +|++ ++|+ +|+.|++|+|||.. ++|+++|.+ |..-+..|+++|++.+|+-
T Consensus 514 l~~--s~dg---~~l~-s~~~dg~v~lwd~~-------------~~~~~~~~~--------h~~~v~~~~fs~dg~~l~s 566 (577)
T 2ymu_A 514 VAF--SPDG---QTIA-SASDDKTVKLWNRN-------------GQLLQTLTG--------HSSSVWGVAFSPDGQTIAS 566 (577)
T ss_dssp EEE--CTTS---SCEE-EEETTSEEEEECTT-------------SCEEEEEEC--------CSSCEEEEEECTTSSCEEE
T ss_pred EEE--cCCC---CEEE-EEECcCEEEEEeCC-------------CCEEEEEcC--------CCCCEEEEEEcCCCCEEEE
Confidence 999 4554 5466 57799999999952 279999985 6777889999999999887
Q ss_pred eccCC
Q 001070 293 ANAKK 297 (1165)
Q Consensus 293 an~~r 297 (1165)
+...+
T Consensus 567 ~~~D~ 571 (577)
T 2ymu_A 567 ASSDK 571 (577)
T ss_dssp EETTS
T ss_pred EeCCC
Confidence 66543
No 56
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.11 E-value=6.5e-10 Score=116.40 Aligned_cols=139 Identities=14% Similarity=0.135 Sum_probs=101.7
Q ss_pred ecCceEEEeecCCcEEEEeCcchhhHhhcCCcc-------------------------EEEeecCCCceeEEec-----C
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNTATRSLLRGHTK-------------------------IKIWEDSKVAPLIILK-----P 204 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t~ir~llrGH~q-------------------------VriWD~~~g~pl~~le-----p 204 (1165)
.|++||++|..||.|+|||+.+.....+.+|.. |+|||.+++.++..+. +
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 257 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKA 257 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCC
Confidence 589999999999999999998733233344432 9999999887655554 7
Q ss_pred CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCC-------CCCCCCcceEEEEeccCCCCCcccccc
Q 001070 205 HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSL-------PTHAESWKCTQTLDLKSSAKPRVEEAF 277 (1165)
Q Consensus 205 hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~-------~~~~~~w~C~QTLe~~~s~~~~~~~af 277 (1165)
|. ..|++++|. | ++..++++|+.|++|+||++..+..-.. ......++|+.++.. |...
T Consensus 258 ~~-~~v~~~~~~--~---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------~~~~ 323 (357)
T 3i2n_A 258 HK-STVWQVRHL--P---QNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL--------STQP 323 (357)
T ss_dssp CS-SCEEEEEEE--T---TEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC--------CSSC
T ss_pred Cc-CCEEEEEEC--C---CCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc--------CCCC
Confidence 74 599999995 4 4453555788999999999976532111 011124689999984 6778
Q ss_pred EEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 278 FNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 278 f~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
+..++.+|++.+|+++......|+...+..
T Consensus 324 v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 324 ISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred eeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 889999999999997666777888877764
No 57
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.11 E-value=1e-09 Score=114.84 Aligned_cols=169 Identities=14% Similarity=0.204 Sum_probs=114.1
Q ss_pred CceEEEeecCCcEEEEeCcc-h-hhHhhcCCcc----------------------------EEEeecCCCc-eeEEecCC
Q 001070 157 KHYVCYGLKGGNVRVLNLNT-A-TRSLLRGHTK----------------------------IKIWEDSKVA-PLIILKPH 205 (1165)
Q Consensus 157 ~~yIayG~kdg~IRVwdi~t-~-ir~llrGH~q----------------------------VriWD~~~g~-pl~~leph 205 (1165)
|++|++|..||.|+|||+.+ . ....|+||.. |+|||.+++. ++..+++|
T Consensus 80 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 80 QRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp TCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC
T ss_pred CceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc
Confidence 69999999999999999998 4 5667888875 9999999886 89999998
Q ss_pred CCC---CcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEE
Q 001070 206 GGQ---PVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVV 282 (1165)
Q Consensus 206 dG~---sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~ 282 (1165)
.|+ .|++++|.-+ -.+++.+++ +|+.|++|++||+..+ +|..... +..-+..++
T Consensus 160 ~~~~~~~v~~~~~~~~-~~~~~~~l~-~~~~d~~i~i~d~~~~------------~~~~~~~---------~~~~v~~~~ 216 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNA-YNQEERVVC-AGYDNGDIKLFDLRNM------------ALRWETN---------IKNGVCSLE 216 (357)
T ss_dssp TTSCCCCEEEEEEECC-CC-CCCEEE-EEETTSEEEEEETTTT------------EEEEEEE---------CSSCEEEEE
T ss_pred CCCCCCceEEEEEEec-cCCCCCEEE-EEccCCeEEEEECccC------------ceeeecC---------CCCceEEEE
Confidence 775 8999996210 123445455 5788999999998544 6655443 456678999
Q ss_pred eec---CCcEEEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC-------CCcceEEEEEeehh
Q 001070 283 VLS---QAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP-------PSEHIIKLYCVQTQ 351 (1165)
Q Consensus 283 ~~p---~a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~-------~ge~~vq~yCvQtq 351 (1165)
++| ++++|+.+.. ...||...+..+..- ..+.....-.-..+|.++....+. ...+.|++|-+.+.
T Consensus 217 ~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 217 FDRKDISMNKLVATSL-EGKFHVFDMRTQHPT--KGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp ESCSSSSCCEEEEEES-TTEEEEEEEEEEETT--TEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred cCCCCCCCCEEEEECC-CCeEEEEeCcCCCcc--cceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 999 8888887754 456777777653221 111110000123445554443332 23457888887654
No 58
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.11 E-value=6.5e-10 Score=122.22 Aligned_cols=167 Identities=23% Similarity=0.331 Sum_probs=107.4
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCc----------------------c------------------EEEe
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHT----------------------K------------------IKIW 191 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~----------------------q------------------VriW 191 (1165)
++-||+|||+|. ++.|+|||+.+ .....|.+|. . ||||
T Consensus 72 fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iw 150 (393)
T 1erj_A 72 FSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIW 150 (393)
T ss_dssp ECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEE
Confidence 445899999987 78999999987 4434444442 0 9999
Q ss_pred ecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCC
Q 001070 192 EDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKP 271 (1165)
Q Consensus 192 D~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~ 271 (1165)
|..++.++.++++|. ..|++++|. |++ .+|+ +|+.|++|+|||+..+ +|..++..
T Consensus 151 d~~~~~~~~~~~~h~-~~v~~~~~~--p~~---~~l~-s~s~d~~v~iwd~~~~------------~~~~~~~~------ 205 (393)
T 1erj_A 151 DIENRKIVMILQGHE-QDIYSLDYF--PSG---DKLV-SGSGDRTVRIWDLRTG------------QCSLTLSI------ 205 (393)
T ss_dssp ETTTTEEEEEECCCS-SCEEEEEEC--TTS---SEEE-EEETTSEEEEEETTTT------------EEEEEEEC------
T ss_pred ECCCCcEEEEEccCC-CCEEEEEEc--CCC---CEEE-EecCCCcEEEEECCCC------------eeEEEEEc------
Confidence 999999999999995 489999994 554 4455 6889999999998543 89988874
Q ss_pred ccccccEEEEEeec-CCcEEEEeccCCCcEEEEEeecCCCccccccccccc--cccccceeeeeeccCC------CCcce
Q 001070 272 RVEEAFFNQVVVLS-QAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAE--FTVTMPVLSFTGTIDP------PSEHI 342 (1165)
Q Consensus 272 ~~~~aff~sV~~~p-~a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiae--F~v~~PILSft~~~d~------~ge~~ 342 (1165)
..-+..++++| ++.+|+.+... ..|+...+..+.- ..+++...+ ..-..+|.++....|+ ...+.
T Consensus 206 ---~~~v~~~~~~~~~~~~l~~~s~d-~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 206 ---EDGVTTVAVSPGDGKYIAAGSLD-RAVRVWDSETGFL--VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp ---SSCEEEEEECSTTCCEEEEEETT-SCEEEEETTTCCE--EEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ---CCCcEEEEEECCCCCEEEEEcCC-CcEEEEECCCCcE--EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 23466888999 66676666544 4566555432211 111111100 1123455555554444 12457
Q ss_pred EEEEEeehh
Q 001070 343 IKLYCVQTQ 351 (1165)
Q Consensus 343 vq~yCvQtq 351 (1165)
|++|-+++.
T Consensus 280 v~~wd~~~~ 288 (393)
T 1erj_A 280 VKLWNLQNA 288 (393)
T ss_dssp EEEEEC---
T ss_pred EEEEECCCC
Confidence 899988753
No 59
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.11 E-value=1.8e-09 Score=110.76 Aligned_cols=87 Identities=16% Similarity=0.273 Sum_probs=68.7
Q ss_pred ecCceEEEeecCCcEEEEeCcch-----hhHhhcCCcc------------------------EEEeecCCC---------
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNTA-----TRSLLRGHTK------------------------IKIWEDSKV--------- 196 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t~-----ir~llrGH~q------------------------VriWD~~~g--------- 196 (1165)
-||+||++|..||.|||||+.+. ....|+||.. |+|||..++
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 100 (351)
T 3f3f_A 21 FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRW 100 (351)
T ss_dssp SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSE
T ss_pred CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCc
Confidence 36899999999999999999862 4456778876 999999887
Q ss_pred ceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcC
Q 001070 197 APLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEE 246 (1165)
Q Consensus 197 ~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~ 246 (1165)
.++..+..|. ..|++++|. |+.. +.+++ +|+.|++|+|||+..++
T Consensus 101 ~~~~~~~~~~-~~v~~~~~~--~~~~-~~~l~-~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 101 NKLCTLNDSK-GSLYSVKFA--PAHL-GLKLA-CLGNDGILRLYDALEPS 145 (351)
T ss_dssp EEEEEECCCS-SCEEEEEEC--CGGG-CSEEE-EEETTCEEEEEECSSTT
T ss_pred ceeeeecccC-CceeEEEEc--CCCC-CcEEE-EecCCCcEEEecCCChH
Confidence 5688888885 489999994 5521 34355 57899999999986653
No 60
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.09 E-value=1.2e-09 Score=121.84 Aligned_cols=172 Identities=16% Similarity=0.158 Sum_probs=121.6
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhH----hhcCCcc-------------------------EEEeecCCCceeEE-ecC
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRS----LLRGHTK-------------------------IKIWEDSKVAPLII-LKP 204 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~----llrGH~q-------------------------VriWD~~~g~pl~~-lep 204 (1165)
||+||++|.++|.|++||+.+ .... .+.||.. |||||.+++.++.. +.+
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 239 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG 239 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC
Confidence 799999999999999999987 3332 7778763 99999999988887 557
Q ss_pred CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCC----------------
Q 001070 205 HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSS---------------- 268 (1165)
Q Consensus 205 hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s---------------- 268 (1165)
|. ..|++++|. ++.+|+ +|+.|++|+|||+..+ +|++++.+...
T Consensus 240 h~-~~v~~~~~s------d~~~l~-s~~~d~~v~vwd~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (450)
T 2vdu_B 240 HK-HFVSSICCG------KDYLLL-SAGGDDKIFAWDWKTG------------KNLSTFDYNSLIKPYLNDQHLAPPRFQ 299 (450)
T ss_dssp CS-SCEEEEEEC------STTEEE-EEESSSEEEEEETTTC------------CEEEEEECHHHHGGGCCTTSBC-----
T ss_pred CC-CceEEEEEC------CCCEEE-EEeCCCeEEEEECCCC------------cEeeeecchhhhhhhhhhccccccccc
Confidence 74 489999992 344455 5779999999998544 89999985320
Q ss_pred -CCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC----------
Q 001070 269 -AKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP---------- 337 (1165)
Q Consensus 269 -~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~---------- 337 (1165)
......+.-+..++..|++.+|+++....+.||...+... ....+..+..+....+|.+|....+.
T Consensus 300 ~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~---~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~ 376 (450)
T 2vdu_B 300 NENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEK---QKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKES 376 (450)
T ss_dssp -----CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSS---STTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTC
T ss_pred ccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccC---CCCceeeccEeccCCceEEEEecCCcEEEEEecccC
Confidence 0000123456788999999999999978899999999211 11234555555555677776554321
Q ss_pred C--CcceEEEEEeeh
Q 001070 338 P--SEHIIKLYCVQT 350 (1165)
Q Consensus 338 ~--ge~~vq~yCvQt 350 (1165)
. +...|++|-+..
T Consensus 377 ~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 377 SGVQKNFAKFIEYNL 391 (450)
T ss_dssp CSSCCCSEEEEEEET
T ss_pred CCCCCcceEEEEEEc
Confidence 1 244578887654
No 61
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.08 E-value=8.6e-10 Score=122.74 Aligned_cols=138 Identities=8% Similarity=0.131 Sum_probs=106.5
Q ss_pred cCceEEEeecCCcEEEEeCcch----hhHhhcCCcc-----------------------EEEeecCC-CceeEEecCCCC
Q 001070 156 NKHYVCYGLKGGNVRVLNLNTA----TRSLLRGHTK-----------------------IKIWEDSK-VAPLIILKPHGG 207 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t~----ir~llrGH~q-----------------------VriWD~~~-g~pl~~lephdG 207 (1165)
++.+|++|..||.|||||+.+. ....+++|.. |+|||.++ +.++..+..|.
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~- 321 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK- 321 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS-
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC-
Confidence 5789999999999999999973 3446678876 99999998 67899999885
Q ss_pred CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCC--CCCcceEEEEeccCCCCCccccccEEEEEeec
Q 001070 208 QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTH--AESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS 285 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~--~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p 285 (1165)
..|.+++| .|++.. ++++|+.|++|+|||+........+.+ .....++.++. +|...+..++.+|
T Consensus 322 ~~v~~i~~--sp~~~~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--------~h~~~v~~~~~~p 388 (430)
T 2xyi_A 322 DEIFQVQW--SPHNET---ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG--------GHTAKISDFSWNP 388 (430)
T ss_dssp SCEEEEEE--CSSCTT---EEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECC--------CCSSCEEEEEECS
T ss_pred CCEEEEEE--CCCCCC---EEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcC--------CCCCCceEEEECC
Confidence 59999999 566544 666788999999999976321100000 01135666665 4778889999999
Q ss_pred CCcEEEEeccCCCcEEEEEeec
Q 001070 286 QAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 286 ~a~~ilLan~~r~aIYalhl~~ 307 (1165)
++.|+|++....+.|++..+..
T Consensus 389 ~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 389 NEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp SSTTEEEEEETTSEEEEEEECH
T ss_pred CCCCEEEEEECCCCEEEeEccc
Confidence 9999999999999999988864
No 62
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.08 E-value=5e-10 Score=122.74 Aligned_cols=183 Identities=13% Similarity=0.131 Sum_probs=122.0
Q ss_pred Cceee-cC----CceEEecccCCCCCCCCCCcccccccccCCCcccccccEee------ecCceEEEeecCCcEEEEeCc
Q 001070 107 YGKRV-FG----DYVAYDVDAVEEGREPTQQLEVNPITKYGSDPELLIGRQIA------VNKHYVCYGLKGGNVRVLNLN 175 (1165)
Q Consensus 107 ~Gr~l-~g----~~~~~dVd~~~~ge~~~pqlev~pIt~Y~sd~~~~~GR~IA------Vn~~yIayG~kdg~IRVwdi~ 175 (1165)
.|++| .| .-.+||++....|+.. ..+...+|..+...+.-..+.-+. -|+++|++|..||.|||||+.
T Consensus 122 ~~~~l~s~s~dg~i~vwd~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 200 (437)
T 3gre_A 122 NFDAFAVSSKDGQIIVLKVNHYQQESEV-KFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR 200 (437)
T ss_dssp TSSEEEEEETTSEEEEEEEEEEEETTEE-EEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEeCCCEEEEEEeccccCCcee-eccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 56666 43 3356888755455444 333334554444332111122222 359999999999999999999
Q ss_pred c-hhhHhhcC--Ccc----------------------EEEeecCCCceeEEec-CCCCCCcceeEeecCCC-CCCceEEE
Q 001070 176 T-ATRSLLRG--HTK----------------------IKIWEDSKVAPLIILK-PHGGQPVNSAQYLTAPN-QAGHIILV 228 (1165)
Q Consensus 176 t-~ir~llrG--H~q----------------------VriWD~~~g~pl~~le-phdG~sV~SVaFl~aP~-~~d~~~lv 228 (1165)
+ .....|++ |.. |+|||.+++.++..|+ +|. .+|++++|. |. .+++.+|+
T Consensus 201 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~~--~~~s~~~~~l~ 277 (437)
T 3gre_A 201 TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH-APITHVEVC--QFYGKNSVIVV 277 (437)
T ss_dssp TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC-EEEEEEEEC--TTTCTTEEEEE
T ss_pred CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC-CceEEEEec--cccCCCccEEE
Confidence 8 66667888 655 9999999999999997 554 499999884 43 34556455
Q ss_pred eecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCC------C----------cc--ccccEEEEEeecCCcEE
Q 001070 229 TAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAK------P----------RV--EEAFFNQVVVLSQAGLL 290 (1165)
Q Consensus 229 tsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~------~----------~~--~~aff~sV~~~p~a~~i 290 (1165)
+|+.|++|+|||+..+ +|+++|..+.... + .+ |..-+..++++ ++.+|
T Consensus 278 -s~~~dg~i~iwd~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l 343 (437)
T 3gre_A 278 -GGSSKTFLTIWNFVKG------------HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKIL 343 (437)
T ss_dssp -EESTTEEEEEEETTTT------------EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEE
T ss_pred -EEcCCCcEEEEEcCCC------------cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEE
Confidence 6899999999998544 8999998653211 0 11 56667788888 66666
Q ss_pred EEeccCCCcEEEEEeecC
Q 001070 291 LFANAKKNAIYSVHLGYG 308 (1165)
Q Consensus 291 lLan~~r~aIYalhl~~g 308 (1165)
+.+. .-..|+...+..+
T Consensus 344 ~s~~-~d~~i~~wd~~~~ 360 (437)
T 3gre_A 344 LTDE-ATSSIVMFSLNEL 360 (437)
T ss_dssp EEEG-GGTEEEEEETTCG
T ss_pred EecC-CCCeEEEEECCCc
Confidence 5554 4457777776543
No 63
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.07 E-value=2e-09 Score=112.58 Aligned_cols=154 Identities=14% Similarity=0.201 Sum_probs=88.0
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCCcce
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQPVNS 212 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~sV~S 212 (1165)
||+||++|..||.|+|||+.+ .....|.+|.. |+|||..++.++..+. | +..|.+
T Consensus 43 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~-~~~v~~ 120 (369)
T 3zwl_B 43 EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-S-PVPVKR 120 (369)
T ss_dssp TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-C-SSCEEE
T ss_pred CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-c-CCCeEE
Confidence 566777777777777777776 55556677766 7777777776666666 3 346677
Q ss_pred eEeecCCCCCCceEEEeecCCC-----ceEEEeEccCcCCC----------------------------------CCCC-
Q 001070 213 AQYLTAPNQAGHIILVTAGPLN-----REVKLWASASEEGW----------------------------------SLPT- 252 (1165)
Q Consensus 213 VaFl~aP~~~d~~~lvtsGsln-----rtIKLW~~a~~~~~----------------------------------~~~~- 252 (1165)
++|. |++ .++++ |..+ ++|++|++...... ++-+
T Consensus 121 ~~~~--~~~---~~l~~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 121 VEFS--PCG---NYFLA-ILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH 194 (369)
T ss_dssp EEEC--TTS---SEEEE-EECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE
T ss_pred EEEc--cCC---CEEEE-ecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc
Confidence 7762 332 22333 3333 55555555433210 0000
Q ss_pred -CC-------CC-cceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeecCCCccccccccccccc
Q 001070 253 -HA-------ES-WKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFT 323 (1165)
Q Consensus 253 -~~-------~~-w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~ 323 (1165)
++ .. +.++.++.. |..-+..++++|++.+|+.+... ..|+...+..+ ..+..|.
T Consensus 195 ~dg~i~i~d~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d-~~i~v~d~~~~--------~~~~~~~ 257 (369)
T 3zwl_B 195 KDGKISKYDVSNNYEYVDSIDL--------HEKSISDMQFSPDLTYFITSSRD-TNSFLVDVSTL--------QVLKKYE 257 (369)
T ss_dssp TTSEEEEEETTTTTEEEEEEEC--------CSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTC--------CEEEEEE
T ss_pred CCCEEEEEECCCCcEeEEEEec--------CCCceeEEEECCCCCEEEEecCC-ceEEEEECCCC--------ceeeeec
Confidence 00 11 355556553 56677899999999998877654 45776665432 2233444
Q ss_pred cccceeeeeec
Q 001070 324 VTMPVLSFTGT 334 (1165)
Q Consensus 324 v~~PILSft~~ 334 (1165)
...++.++...
T Consensus 258 ~~~~~~~~~~~ 268 (369)
T 3zwl_B 258 TDCPLNTAVIT 268 (369)
T ss_dssp CSSCEEEEEEC
T ss_pred CCCCceeEEec
Confidence 55555555443
No 64
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.07 E-value=1.2e-09 Score=118.99 Aligned_cols=173 Identities=13% Similarity=0.167 Sum_probs=114.6
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-h-----------hhHhhcCCc------------c---------------------
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-A-----------TRSLLRGHT------------K--------------------- 187 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-~-----------ir~llrGH~------------q--------------------- 187 (1165)
+.-||+|||+|..||.|||||+.+ . +...|+||+ .
T Consensus 36 ~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~ 115 (447)
T 3dw8_B 36 FNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTN 115 (447)
T ss_dssp ECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEEC
T ss_pred ECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCC
Confidence 334799999999999999999997 3 356888997 2
Q ss_pred ---EEEeecCCCce---------------------------------------eEEe-cCCCCCCcceeEeecCCCCCCc
Q 001070 188 ---IKIWEDSKVAP---------------------------------------LIIL-KPHGGQPVNSAQYLTAPNQAGH 224 (1165)
Q Consensus 188 ---VriWD~~~g~p---------------------------------------l~~l-ephdG~sV~SVaFl~aP~~~d~ 224 (1165)
|||||..++.. ..++ .+|. ..|++++|. |+ +
T Consensus 116 d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~--~~---~ 189 (447)
T 3dw8_B 116 DKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT-YHINSISIN--SD---Y 189 (447)
T ss_dssp SSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS-SCCCEEEEC--TT---S
T ss_pred CCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC-cceEEEEEc--CC---C
Confidence 99999876332 1233 5563 489999994 54 4
Q ss_pred eEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCC-cEEEEeccCCCcEEEE
Q 001070 225 IILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQA-GLLLFANAKKNAIYSV 303 (1165)
Q Consensus 225 ~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a-~~ilLan~~r~aIYal 303 (1165)
.+|++ | .|++|+|||+... ..|.+++..... ...+|...+..++++|++ .+|+.+.. ...|+..
T Consensus 190 ~~l~s-~-~d~~i~iwd~~~~-----------~~~~~~~~~~~~-~~~~~~~~v~~~~~~p~~~~~l~s~~~-dg~i~iw 254 (447)
T 3dw8_B 190 ETYLS-A-DDLRINLWHLEIT-----------DRSFNIVDIKPA-NMEELTEVITAAEFHPNSCNTFVYSSS-KGTIRLC 254 (447)
T ss_dssp SEEEE-E-CSSEEEEEETTEE-----------EEEEEEEECCCS-SGGGCCCCEEEEEECSSCTTEEEEEET-TSCEEEE
T ss_pred CEEEE-e-CCCeEEEEECCCC-----------Cceeeeeecccc-cccccCcceEEEEECCCCCcEEEEEeC-CCeEEEE
Confidence 55665 5 5999999998532 378887765432 223678889999999999 66665554 4567777
Q ss_pred EeecCCCcccccccccccccccc-------------ceeeeeeccCC-----CCcceEEEEEeeh
Q 001070 304 HLGYGNNSAATRIDYIAEFTVTM-------------PVLSFTGTIDP-----PSEHIIKLYCVQT 350 (1165)
Q Consensus 304 hl~~g~~~~~~r~dyiaeF~v~~-------------PILSft~~~d~-----~ge~~vq~yCvQt 350 (1165)
.+..+.. ....+..|.... +|.++.-..++ .+.+.|++|-+.+
T Consensus 255 d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~ 315 (447)
T 3dw8_B 255 DMRASAL----CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNM 315 (447)
T ss_dssp ETTTCSS----SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTC
T ss_pred ECcCCcc----ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCC
Confidence 6654332 111122333222 66666665554 1227788887754
No 65
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.06 E-value=1.1e-09 Score=115.53 Aligned_cols=129 Identities=12% Similarity=0.166 Sum_probs=92.3
Q ss_pred ecCceEEEeecCCcEEEEeCcc---hhhHhhcCCcc------------------------EEEeecCCCc--eeEEecCC
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNT---ATRSLLRGHTK------------------------IKIWEDSKVA--PLIILKPH 205 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t---~ir~llrGH~q------------------------VriWD~~~g~--pl~~leph 205 (1165)
-||+||++|..||.|||||+.+ .....|+||+. |||||.+++. .+.++..|
T Consensus 19 ~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h 98 (297)
T 2pm7_B 19 YYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVH 98 (297)
T ss_dssp TTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCC
T ss_pred CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecC
Confidence 3699999999999999999974 44567899986 9999999873 67788877
Q ss_pred CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeec
Q 001070 206 GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS 285 (1165)
Q Consensus 206 dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p 285 (1165)
. ..|++|+| .|+.. +. ++++|+.|++|+|||+..+.. + ...++. +|..-++.++.+|
T Consensus 99 ~-~~v~~v~~--~p~~~-g~-~l~s~s~d~~v~~wd~~~~~~---------~-~~~~~~--------~h~~~v~~~~~~p 155 (297)
T 2pm7_B 99 S-ASVNSVQW--APHEY-GP-MLLVASSDGKVSVVEFKENGT---------T-SPIIID--------AHAIGVNSASWAP 155 (297)
T ss_dssp S-SCEEEEEE--CCGGG-CS-EEEEEETTSEEEEEEBCSSSC---------B-CCEEEE--------CCSSCEEEEEECC
T ss_pred C-CceeEEEe--CcCCC-Cc-EEEEEECCCcEEEEEecCCCc---------e-eeeeee--------cccCccceEeecC
Confidence 4 48999999 45521 23 344688999999999865421 1 124454 3666777888888
Q ss_pred CC-------------cEEEEeccCCCcEEEEEeec
Q 001070 286 QA-------------GLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 286 ~a-------------~~ilLan~~r~aIYalhl~~ 307 (1165)
++ .+|+.+. .-..|+...+..
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs-~D~~v~lwd~~~ 189 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGG-ADNLVKIWKYNS 189 (297)
T ss_dssp CC------------CCEEEEEE-TTSCEEEEEEET
T ss_pred CcccccccCCCCCCcceEEEEc-CCCcEEEEEEcC
Confidence 73 4555444 345566666654
No 66
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.06 E-value=1.9e-10 Score=122.98 Aligned_cols=118 Identities=11% Similarity=0.100 Sum_probs=87.3
Q ss_pred cCceEEEeecCCcEEEEeCcch----hhHhhcC-Ccc----------------------EEEeecC--------------
Q 001070 156 NKHYVCYGLKGGNVRVLNLNTA----TRSLLRG-HTK----------------------IKIWEDS-------------- 194 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t~----ir~llrG-H~q----------------------VriWD~~-------------- 194 (1165)
||++|++|..||.|||||+.+. +...|.+ |.. |+|||.+
T Consensus 111 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 190 (377)
T 3dwl_C 111 NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWG 190 (377)
T ss_dssp TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSC
T ss_pred CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccc
Confidence 6899999999999999999983 3456666 877 9999985
Q ss_pred ----CCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCC
Q 001070 195 ----KVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAK 270 (1165)
Q Consensus 195 ----~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~ 270 (1165)
.+.++..+ +|. ..|++++| .|++ ++|+ +|+.|++|+|||+..+. ....|++++..
T Consensus 191 ~~~~~~~~~~~~-~~~-~~v~~~~~--sp~~---~~l~-~~~~d~~i~iwd~~~~~--------~~~~~~~~~~~----- 249 (377)
T 3dwl_C 191 SRLPFNTVCAEY-PSG-GWVHAVGF--SPSG---NALA-YAGHDSSVTIAYPSAPE--------QPPRALITVKL----- 249 (377)
T ss_dssp SCCCEEEEEECC-CCS-SSEEEEEE--CTTS---SCEE-EEETTTEEC-CEECSTT--------SCEEECCCEEC-----
T ss_pred cccchhhhhhcc-cCC-ceEEEEEE--CCCC---CEEE-EEeCCCcEEEEECCCCC--------CcceeeEeecC-----
Confidence 35567777 664 48999999 4655 4355 57899999999986551 12334778874
Q ss_pred CccccccEEEEEeecCCcEEEEeccCC
Q 001070 271 PRVEEAFFNQVVVLSQAGLLLFANAKK 297 (1165)
Q Consensus 271 ~~~~~aff~sV~~~p~a~~ilLan~~r 297 (1165)
|...+..++++|++.+|+.+...+
T Consensus 250 ---~~~~v~~~~~s~~~~~l~~~~~~~ 273 (377)
T 3dwl_C 250 ---SQLPLRSLLWANESAIVAAGYNYS 273 (377)
T ss_dssp ---SSSCEEEEEEEETTEEEEEESSSS
T ss_pred ---CCCceEEEEEcCCCCEEEEEcCCc
Confidence 667788999999999887775443
No 67
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.06 E-value=6.6e-10 Score=121.90 Aligned_cols=74 Identities=8% Similarity=0.092 Sum_probs=56.4
Q ss_pred CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCC
Q 001070 208 QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQA 287 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a 287 (1165)
..|++|+| +|+ +++| ++|+.|++|+|||+.+ ++|++++. .+|...+..|+++|++
T Consensus 270 ~~V~~~~~--Spd---g~~l-asgs~D~~V~iwd~~~------------~~~~~~~~-------~gH~~~V~~v~fSpdg 324 (365)
T 4h5i_A 270 KGITSMDV--DMK---GELA-VLASNDNSIALVKLKD------------LSMSKIFK-------QAHSFAITEVTISPDS 324 (365)
T ss_dssp SCEEEEEE--CTT---SCEE-EEEETTSCEEEEETTT------------TEEEEEET-------TSSSSCEEEEEECTTS
T ss_pred CCeEeEEE--CCC---CCce-EEEcCCCEEEEEECCC------------CcEEEEec-------CcccCCEEEEEECCCC
Confidence 36888888 344 4544 4688999999999844 48999863 1588999999999999
Q ss_pred cEEEEeccCCCcEEEEEeec
Q 001070 288 GLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 288 ~~ilLan~~r~aIYalhl~~ 307 (1165)
.+|+-+. .-+.|.+..|..
T Consensus 325 ~~laS~S-~D~tvrvw~ip~ 343 (365)
T 4h5i_A 325 TYVASVS-AANTIHIIKLPL 343 (365)
T ss_dssp CEEEEEE-TTSEEEEEECCT
T ss_pred CEEEEEe-CCCeEEEEEcCC
Confidence 9876554 456788888753
No 68
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.06 E-value=3e-09 Score=114.32 Aligned_cols=123 Identities=13% Similarity=0.224 Sum_probs=86.9
Q ss_pred cCceEEEeecCCcEEEEeCcchhhH---hhcCCcc--------------------------------EEEeecCCCceeE
Q 001070 156 NKHYVCYGLKGGNVRVLNLNTATRS---LLRGHTK--------------------------------IKIWEDSKVAPLI 200 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t~ir~---llrGH~q--------------------------------VriWD~~~g~pl~ 200 (1165)
||++|++|..||.|||||+...... ...+|.. ||||| .++..+.
T Consensus 129 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~ 207 (343)
T 2xzm_R 129 DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRY 207 (343)
T ss_dssp STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEE
T ss_pred CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeE
Confidence 6999999999999999999752111 1224431 99999 4566788
Q ss_pred EecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEE
Q 001070 201 ILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQ 280 (1165)
Q Consensus 201 ~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~s 280 (1165)
.+++|. ..|++++| .|++ ++|+ +|+.|++|+|||+... ..+..++.. ...++.
T Consensus 208 ~~~~h~-~~v~~~~~--s~~g---~~l~-sgs~dg~v~iwd~~~~-----------~~~~~~~~~---------~~~v~~ 260 (343)
T 2xzm_R 208 TFKAHE-SNVNHLSI--SPNG---KYIA-TGGKDKKLLIWDILNL-----------TYPQREFDA---------GSTINQ 260 (343)
T ss_dssp EEECCS-SCEEEEEE--CTTS---SEEE-EEETTCEEEEEESSCC-----------SSCSEEEEC---------SSCEEE
T ss_pred EEcCcc-ccceEEEE--CCCC---CEEE-EEcCCCeEEEEECCCC-----------cccceeecC---------CCcEEE
Confidence 899885 48999999 4554 5455 5889999999998322 134445542 234789
Q ss_pred EEeecCCcEEEEeccCCCcEEEEEeecC
Q 001070 281 VVVLSQAGLLLFANAKKNAIYSVHLGYG 308 (1165)
Q Consensus 281 V~~~p~a~~ilLan~~r~aIYalhl~~g 308 (1165)
|+++|++.+|..+. ...|+...+..+
T Consensus 261 v~~sp~~~~la~~~--d~~v~iw~~~~~ 286 (343)
T 2xzm_R 261 IAFNPKLQWVAVGT--DQGVKIFNLMTQ 286 (343)
T ss_dssp EEECSSSCEEEEEE--SSCEEEEESSSC
T ss_pred EEECCCCCEEEEEC--CCCEEEEEeCCC
Confidence 99999998877654 345777776543
No 69
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.05 E-value=2e-10 Score=127.69 Aligned_cols=128 Identities=14% Similarity=0.143 Sum_probs=94.3
Q ss_pred cCceEEEeecCCcEEEEeCcch-hhHhhcCCcc------------------------EEEeecCCCceeEEecCCCCCCc
Q 001070 156 NKHYVCYGLKGGNVRVLNLNTA-TRSLLRGHTK------------------------IKIWEDSKVAPLIILKPHGGQPV 210 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t~-ir~llrGH~q------------------------VriWD~~~g~pl~~lephdG~sV 210 (1165)
|+++|++|..||.|||||+.+. ++.+..+|.. |+|||.+ +..+..+++|. ..|
T Consensus 176 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~-~~v 253 (435)
T 4e54_B 176 NTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHK-KKV 253 (435)
T ss_dssp CTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCS-SCE
T ss_pred CCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEeccc-ceE
Confidence 6899999999999999999883 4444444432 9999986 55688899885 489
Q ss_pred ceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEE
Q 001070 211 NSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLL 290 (1165)
Q Consensus 211 ~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~i 290 (1165)
++|+| .|++.. ++++|+.|++|+|||+...+ |..++.. ..+|..-++.|+++|++.+|
T Consensus 254 ~~v~~--~p~~~~---~~~s~s~d~~v~iwd~~~~~------------~~~~~~~-----~~~h~~~v~~~~~spdg~~l 311 (435)
T 4e54_B 254 THVAL--NPCCDW---FLATASVDQTVKIWDLRQVR------------GKASFLY-----SLPHRHPVNAACFSPDGARL 311 (435)
T ss_dssp EEEEE--CTTCSS---EEEEEETTSBCCEEETTTCC------------SSSCCSB-----CCBCSSCEEECCBCTTSSEE
T ss_pred Eeeee--cCCCce---EEEEecCcceeeEEeccccc------------ccceEEE-----eeeccccccceeECCCCCee
Confidence 99999 566654 67779999999999986542 2222211 12577888899999999998
Q ss_pred EEeccCCCcEEEEEeecC
Q 001070 291 LFANAKKNAIYSVHLGYG 308 (1165)
Q Consensus 291 lLan~~r~aIYalhl~~g 308 (1165)
+.+... ..|+...+..+
T Consensus 312 ~s~~~D-~~i~iwd~~~~ 328 (435)
T 4e54_B 312 LTTDQK-SEIRVYSASQW 328 (435)
T ss_dssp EEEESS-SCEEEEESSSS
T ss_pred EEEcCC-CEEEEEECCCC
Confidence 776654 55666665543
No 70
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.05 E-value=1.2e-09 Score=117.51 Aligned_cols=129 Identities=14% Similarity=0.137 Sum_probs=99.8
Q ss_pred cCceEEEeecCCcEEEEeCcchhhHhhcCCc---c----------------------EEEeecCCCceeEEecCCCCCCc
Q 001070 156 NKHYVCYGLKGGNVRVLNLNTATRSLLRGHT---K----------------------IKIWEDSKVAPLIILKPHGGQPV 210 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t~ir~llrGH~---q----------------------VriWD~~~g~pl~~lephdG~sV 210 (1165)
|+++|++|..||.|||||+.+.....+.+|. . |+|||. ++.++..+..|. ..|
T Consensus 130 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~-~~v 207 (383)
T 3ei3_B 130 NTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHK-AKV 207 (383)
T ss_dssp EEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSS-SCE
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCC-CcE
Confidence 5799999999999999999984444555544 1 999999 577899999885 499
Q ss_pred ceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeec-CCcE
Q 001070 211 NSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS-QAGL 289 (1165)
Q Consensus 211 ~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p-~a~~ 289 (1165)
++++| .|++.. ++++|+.|++|+|||+.... ....|+.++. |...+..++++| ++.+
T Consensus 208 ~~~~~--~~~~~~---~l~s~~~d~~i~iwd~~~~~--------~~~~~~~~~~---------~~~~v~~~~~s~~~~~~ 265 (383)
T 3ei3_B 208 THAEF--NPRCDW---LMATSSVDATVKLWDLRNIK--------DKNSYIAEMP---------HEKPVNAAYFNPTDSTK 265 (383)
T ss_dssp EEEEE--CSSCTT---EEEEEETTSEEEEEEGGGCC--------STTCEEEEEE---------CSSCEEEEEECTTTSCE
T ss_pred EEEEE--CCCCCC---EEEEEeCCCEEEEEeCCCCC--------cccceEEEec---------CCCceEEEEEcCCCCCE
Confidence 99999 466643 45578899999999996642 2357888885 467788999999 8888
Q ss_pred EEEeccCCCcEEEEEeecCC
Q 001070 290 LLFANAKKNAIYSVHLGYGN 309 (1165)
Q Consensus 290 ilLan~~r~aIYalhl~~g~ 309 (1165)
|+.+.. ...|+...+..+.
T Consensus 266 l~~~~~-d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 266 LLTTDQ-RNEIRVYSSYDWS 284 (383)
T ss_dssp EEEEES-SSEEEEEETTBTT
T ss_pred EEEEcC-CCcEEEEECCCCc
Confidence 876654 4677777766543
No 71
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.04 E-value=2.6e-09 Score=113.68 Aligned_cols=129 Identities=16% Similarity=0.261 Sum_probs=102.2
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhh-------------cCCcc-----------------------EEEeecCCCce
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLL-------------RGHTK-----------------------IKIWEDSKVAP 198 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~ll-------------rGH~q-----------------------VriWD~~~g~p 198 (1165)
||+||++|..||.|||||+.+ .....+ .||.. |+|||..++.+
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 134 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT 134 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc
Confidence 789999999999999999997 333333 25765 99999999998
Q ss_pred eEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccE
Q 001070 199 LIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFF 278 (1165)
Q Consensus 199 l~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff 278 (1165)
+..+. + ...+++++| .|.++++.+++ +|..|++|++||+..+ .|+.++.. |...+
T Consensus 135 ~~~~~-~-~~~~~~~~~--~~~~~~~~~~~-~~~~~~~v~~~d~~~~------------~~~~~~~~--------~~~~v 189 (408)
T 4a11_B 135 ADVFN-F-EETVYSHHM--SPVSTKHCLVA-VGTRGPKVQLCDLKSG------------SCSHILQG--------HRQEI 189 (408)
T ss_dssp EEEEE-C-SSCEEEEEE--CSSCSSCCEEE-EEESSSSEEEEESSSS------------CCCEEECC--------CCSCE
T ss_pred ceecc-C-CCceeeeEe--ecCCCCCcEEE-EEcCCCeEEEEeCCCc------------ceeeeecC--------CCCcE
Confidence 88887 3 358999999 57766666555 5789999999998544 77788873 66778
Q ss_pred EEEEeecCCcEEEEeccCCCcEEEEEeecCC
Q 001070 279 NQVVVLSQAGLLLFANAKKNAIYSVHLGYGN 309 (1165)
Q Consensus 279 ~sV~~~p~a~~ilLan~~r~aIYalhl~~g~ 309 (1165)
..++++|++.++|++......|+...+..+.
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 8999999999877777777788888776543
No 72
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.04 E-value=1.9e-09 Score=120.14 Aligned_cols=134 Identities=8% Similarity=0.067 Sum_probs=96.0
Q ss_pred eeec---CceEEEeecCCcEEEEeCcc--hhhHhhcCCcc---------------------EEEeecCCCceeEEecCCC
Q 001070 153 IAVN---KHYVCYGLKGGNVRVLNLNT--ATRSLLRGHTK---------------------IKIWEDSKVAPLIILKPHG 206 (1165)
Q Consensus 153 IAVn---~~yIayG~kdg~IRVwdi~t--~ir~llrGH~q---------------------VriWD~~~g~pl~~lephd 206 (1165)
+.-| ++||++|..||.|||||+.+ .++.++.||.. |+|||.++|.++..+..++
T Consensus 203 ~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~ 282 (450)
T 2vdu_B 203 LIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNS 282 (450)
T ss_dssp EEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHH
T ss_pred EcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchh
Confidence 4457 88999999999999999997 34445778875 9999999998888886331
Q ss_pred ------------------------CCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEE
Q 001070 207 ------------------------GQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQT 262 (1165)
Q Consensus 207 ------------------------G~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QT 262 (1165)
...|.+++|. | ++.+|++++..+++|+||++....+ ..+.|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~--~---~~~~l~~~~~~d~~i~iw~~~~~~~-------~~l~~~~~ 350 (450)
T 2vdu_B 283 LIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS--K---NLPFVAFFVEATKCIIILEMSEKQK-------GDLALKQI 350 (450)
T ss_dssp HHGGGCCTTSBC----------CBCCCEEEEEEC--S---SSSEEEEEETTCSEEEEEEECSSST-------TCEEEEEE
T ss_pred hhhhhhhhcccccccccccccccceEEEEEEEEe--C---CCCEEEEEECCCCeEEEEEeccCCC-------CceeeccE
Confidence 2378899994 4 4456887776899999999822211 34689999
Q ss_pred EeccCCCCCccccccEEEEEeecCCcEEEEeccC-----CCcEEEEEeec
Q 001070 263 LDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAK-----KNAIYSVHLGY 307 (1165)
Q Consensus 263 Le~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~-----r~aIYalhl~~ 307 (1165)
+.+ + ..+..++++|++-|+.+++.. .+.|.+..+..
T Consensus 351 ~~~--------~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 351 ITF--------P-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp EEC--------S-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred ecc--------C-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 996 3 557789999954444444544 33344444443
No 73
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.04 E-value=8.4e-10 Score=115.64 Aligned_cols=173 Identities=13% Similarity=0.154 Sum_probs=115.6
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhh---cCCcc----------------------EEEeecCCCceeEEecC-----
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLL---RGHTK----------------------IKIWEDSKVAPLIILKP----- 204 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~ll---rGH~q----------------------VriWD~~~g~pl~~lep----- 204 (1165)
|+++|++|..||.|||||+.+ .....+ .+|.. |+|||.+++..+..++.
T Consensus 127 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 206 (366)
T 3k26_A 127 DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYN 206 (366)
T ss_dssp CTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCC
T ss_pred CCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEec
Confidence 789999999999999999997 444444 78877 99999998754443332
Q ss_pred -----------------------CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCC--CCCCCCcce
Q 001070 205 -----------------------HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSL--PTHAESWKC 259 (1165)
Q Consensus 205 -----------------------hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~--~~~~~~w~C 259 (1165)
|. ..|.+++|. + .+++ +|+.|++|++||+......+. ........|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~-----~--~~l~-~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 277 (366)
T 3k26_A 207 PNKTNRPFISQKIHFPDFSTRDIHR-NYVDCVRWL-----G--DLIL-SKSCENAIVCWKPGKMEDDIDKIKPSESNVTI 277 (366)
T ss_dssp GGGCSSCCCCEEECCCSEEECSSCS-SCCCEEEEE-----T--TEEE-EECSSSEEEEEEESSTTCCGGGCCTTCCCEEE
T ss_pred CCCCcccccceeeccCccccccCCc-ceEEEEEEc-----C--CEEE-EEecCCEEEEEeCCCccccccccccCCcchhe
Confidence 53 489999994 2 2344 578899999999976643211 122234578
Q ss_pred EEEEeccCCCCCccccccEEEEEeecC--CcEEEEeccCCCcEEEEEeecCCCcccccccccccccc---ccceeeeeec
Q 001070 260 TQTLDLKSSAKPRVEEAFFNQVVVLSQ--AGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTV---TMPVLSFTGT 334 (1165)
Q Consensus 260 ~QTLe~~~s~~~~~~~aff~sV~~~p~--a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v---~~PILSft~~ 334 (1165)
+.++.+ |..-+..++++|+ +.+|+.+.. ...||...+..+.. ....+..|.- ..+|.++.-.
T Consensus 278 ~~~~~~--------~~~~v~~~~~s~~~~~~~l~~~~~-dg~i~vwd~~~~~~----~~~~~~~~~~~~~~~~v~~~~~s 344 (366)
T 3k26_A 278 LGRFDY--------SQCDIWYMRFSMDFWQKMLALGNQ-VGKLYVWDLEVEDP----HKAKCTTLTHHKCGAAIRQTSFS 344 (366)
T ss_dssp EEEEEC--------SSCCSSCCCCEECTTSSEEEEECT-TSCEEEEECCSSSG----GGCEEEEECCTTCCSCEEEEEEC
T ss_pred eccccc--------cCCcEEEEEEcCCCCCcEEEEEec-CCcEEEEECCCCCC----ccccceEEcccccCCceEEEEeC
Confidence 888885 4455567788888 888887754 46788888775432 1111222332 4677777665
Q ss_pred cCC------CCcceEEEEEeeh
Q 001070 335 IDP------PSEHIIKLYCVQT 350 (1165)
Q Consensus 335 ~d~------~ge~~vq~yCvQt 350 (1165)
.++ ...+.|++|-++|
T Consensus 345 ~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 345 RDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp TTSSEEEEEETTSEEEEEEC--
T ss_pred CCCCeEEEEeCCCEEEEEEecC
Confidence 555 2346788887765
No 74
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.04 E-value=3.4e-09 Score=113.88 Aligned_cols=123 Identities=7% Similarity=0.073 Sum_probs=100.5
Q ss_pred CceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCCccee
Q 001070 157 KHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQPVNSA 213 (1165)
Q Consensus 157 ~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~sV~SV 213 (1165)
+..+++|..||.|+|||+.+ .+...+.+|.. |+|||..+|..+..+..+ +.|+++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~--~~v~~~ 79 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG--SSPQGV 79 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS--SSEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC--CCccce
Confidence 34567899999999999998 66668888876 999999999988888765 389999
Q ss_pred EeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEe
Q 001070 214 QYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFA 293 (1165)
Q Consensus 214 aFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLa 293 (1165)
+| .|++ ++|+++|+.+++|++||+.++ +|+.++.. + .-+..++++|++++|+++
T Consensus 80 ~~--spdg---~~l~~~~~~~~~v~v~d~~~~------------~~~~~~~~--------~-~~~~~~~~s~dg~~l~~~ 133 (391)
T 1l0q_A 80 AV--SPDG---KQVYVTNMASSTLSVIDTTSN------------TVAGTVKT--------G-KSPLGLALSPDGKKLYVT 133 (391)
T ss_dssp EE--CTTS---SEEEEEETTTTEEEEEETTTT------------EEEEEEEC--------S-SSEEEEEECTTSSEEEEE
T ss_pred EE--CCCC---CEEEEEECCCCEEEEEECCCC------------eEEEEEeC--------C-CCcceEEECCCCCEEEEE
Confidence 99 4544 557778989999999998554 78888874 2 235689999999999999
Q ss_pred ccCCCcEEEEEeec
Q 001070 294 NAKKNAIYSVHLGY 307 (1165)
Q Consensus 294 n~~r~aIYalhl~~ 307 (1165)
+...+.||.+.+..
T Consensus 134 ~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 134 NNGDKTVSVINTVT 147 (391)
T ss_dssp ETTTTEEEEEETTT
T ss_pred eCCCCEEEEEECCC
Confidence 88889999987653
No 75
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.03 E-value=9.3e-10 Score=129.90 Aligned_cols=121 Identities=18% Similarity=0.245 Sum_probs=92.5
Q ss_pred cCceEEEeecCCcEEEEeCcchhh----HhhcCCcc------------------------EEEeecCCCceeEEecCCCC
Q 001070 156 NKHYVCYGLKGGNVRVLNLNTATR----SLLRGHTK------------------------IKIWEDSKVAPLIILKPHGG 207 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t~ir----~llrGH~q------------------------VriWD~~~g~pl~~lephdG 207 (1165)
||++|++|..||.|||||+....+ ....||.. |||||.+++.++..+.+|.|
T Consensus 483 ~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~ 562 (694)
T 3dm0_A 483 DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG 562 (694)
T ss_dssp TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCC
Confidence 689999999999999999865221 12345643 99999999999999999964
Q ss_pred CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCC
Q 001070 208 QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQA 287 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a 287 (1165)
.|++++| +|++ .+|+ +|+.|++|+|||+..+ +|+.+++. ...+..++++|++
T Consensus 563 -~v~~v~~--spdg---~~l~-sg~~Dg~i~iwd~~~~------------~~~~~~~~---------~~~v~~~~~sp~~ 614 (694)
T 3dm0_A 563 -YVSTVAV--SPDG---SLCA-SGGKDGVVLLWDLAEG------------KKLYSLEA---------NSVIHALCFSPNR 614 (694)
T ss_dssp -CEEEEEE--CTTS---SEEE-EEETTSBCEEEETTTT------------EEEECCBC---------SSCEEEEEECSSS
T ss_pred -CEEEEEE--eCCC---CEEE-EEeCCCeEEEEECCCC------------ceEEEecC---------CCcEEEEEEcCCC
Confidence 8999999 4544 5355 6889999999998544 78877763 3457789999998
Q ss_pred cEEEEeccCCCcEEEEEee
Q 001070 288 GLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 288 ~~ilLan~~r~aIYalhl~ 306 (1165)
.+|..+.-. .|+...+.
T Consensus 615 ~~l~~~~~~--~i~iwd~~ 631 (694)
T 3dm0_A 615 YWLCAATEH--GIKIWDLE 631 (694)
T ss_dssp SEEEEEETT--EEEEEETT
T ss_pred cEEEEEcCC--CEEEEECC
Confidence 888776543 36665554
No 76
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.03 E-value=1.6e-09 Score=114.38 Aligned_cols=123 Identities=10% Similarity=0.020 Sum_probs=98.1
Q ss_pred cCceEEEeecCCcEEEEeCcc-h----hhHhhcCCcc----------------------EEEeecC--------------
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-A----TRSLLRGHTK----------------------IKIWEDS-------------- 194 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~----ir~llrGH~q----------------------VriWD~~-------------- 194 (1165)
||+||++|..||.|+|||+.+ . .+.+..+|.. |+|||.+
T Consensus 107 ~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~ 186 (372)
T 1k8k_C 107 NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 186 (372)
T ss_dssp TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTB
T ss_pred CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccc
Confidence 689999999999999999998 3 3456677776 9999953
Q ss_pred ----CCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCC
Q 001070 195 ----KVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAK 270 (1165)
Q Consensus 195 ----~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~ 270 (1165)
.+.++..+..|. ..|.+++|. |++ .+|+ +|+.|++|+|||+..+ +|+.++..
T Consensus 187 ~~~~~~~~~~~~~~~~-~~v~~~~~~--~~~---~~l~-~~~~d~~i~i~d~~~~------------~~~~~~~~----- 242 (372)
T 1k8k_C 187 SKMPFGELMFESSSSC-GWVHGVCFS--ANG---SRVA-WVSHDSTVCLADADKK------------MAVATLAS----- 242 (372)
T ss_dssp SCCCTTCEEEECCCCS-SCEEEEEEC--SSS---SEEE-EEETTTEEEEEEGGGT------------TEEEEEEC-----
T ss_pred cccchhhheEecCCCC-CeEEEEEEC--CCC---CEEE-EEeCCCEEEEEECCCC------------ceeEEEcc-----
Confidence 678899999885 489999994 544 4455 5779999999998544 89999984
Q ss_pred CccccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 271 PRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 271 ~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
|..-+..++++|++.+|+.+ ....||...+..
T Consensus 243 ---~~~~v~~~~~~~~~~~l~~~--~d~~i~i~~~~~ 274 (372)
T 1k8k_C 243 ---ETLPLLAVTFITESSLVAAG--HDCFPVLFTYDS 274 (372)
T ss_dssp ---SSCCEEEEEEEETTEEEEEE--TTSSCEEEEEET
T ss_pred ---CCCCeEEEEEecCCCEEEEE--eCCeEEEEEccC
Confidence 55667899999999988777 566777777765
No 77
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.03 E-value=2e-09 Score=127.08 Aligned_cols=127 Identities=18% Similarity=0.271 Sum_probs=101.8
Q ss_pred eecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCCc
Q 001070 154 AVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQPV 210 (1165)
Q Consensus 154 AVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~sV 210 (1165)
.-||+||++|..||.|+|||..+ .....|.||.. |+|||..+|..+.++.+|. ..|
T Consensus 22 sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~v 100 (814)
T 3mkq_A 22 HPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP-DYI 100 (814)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCS-SCE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCC-CCE
Confidence 33699999999999999999988 56668889987 9999999999999999885 489
Q ss_pred ceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeec-CCcE
Q 001070 211 NSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS-QAGL 289 (1165)
Q Consensus 211 ~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p-~a~~ 289 (1165)
.+++| .|++ .+|+ +|+.|++|++|++..+ |.|.+++.. |...+..++.+| ++.+
T Consensus 101 ~~~~~--s~~~---~~l~-~~~~dg~i~vw~~~~~-----------~~~~~~~~~--------~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 101 RSIAV--HPTK---PYVL-SGSDDLTVKLWNWENN-----------WALEQTFEG--------HEHFVMCVAFNPKDPST 155 (814)
T ss_dssp EEEEE--CSSS---SEEE-EEETTSEEEEEEGGGT-----------SEEEEEEEC--------CSSCEEEEEEETTEEEE
T ss_pred EEEEE--eCCC---CEEE-EEcCCCEEEEEECCCC-----------ceEEEEEcC--------CCCcEEEEEEEcCCCCE
Confidence 99999 4554 4355 5889999999998442 588899884 667788999999 6666
Q ss_pred EEEeccCCCcEEEEEeec
Q 001070 290 LLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 290 ilLan~~r~aIYalhl~~ 307 (1165)
|+.+... ..|+...+..
T Consensus 156 l~~~~~d-g~v~vwd~~~ 172 (814)
T 3mkq_A 156 FASGCLD-RTVKVWSLGQ 172 (814)
T ss_dssp EEEEETT-SEEEEEETTC
T ss_pred EEEEeCC-CeEEEEECCC
Confidence 6666554 5677776643
No 78
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.02 E-value=7.9e-10 Score=122.02 Aligned_cols=149 Identities=16% Similarity=0.168 Sum_probs=93.0
Q ss_pred ecCceEEEeecCCcEEEEeCcch------hhHhhcCCcc------------------------------EEEeecCCCce
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNTA------TRSLLRGHTK------------------------------IKIWEDSKVAP 198 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t~------ir~llrGH~q------------------------------VriWD~~~g~p 198 (1165)
.+++||++|..|+.|||||.++. ....|+||+. |||||++++.+
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 45789999999999999999872 2346899987 99999999888
Q ss_pred eEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCC--CCcceEEEEeccC---CCCCcc
Q 001070 199 LIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHA--ESWKCTQTLDLKS---SAKPRV 273 (1165)
Q Consensus 199 l~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~--~~w~C~QTLe~~~---s~~~~~ 273 (1165)
+..+.+|. .+|++|+|. |++ ..++++|+.|++|+|||+..+......... ..-.+.-++.+.. .....+
T Consensus 179 ~~~~~~~~-~~v~~v~~~--p~~---~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 252 (393)
T 4gq1_A 179 ILAGYPLS-SPGISVQFR--PSN---PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG 252 (393)
T ss_dssp EEEEEECS-SCEEEEEEE--TTE---EEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------C
T ss_pred eeeecCCC-CCcEEEEEC--CCC---CceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc
Confidence 88888885 489999994 544 335667999999999999765321111000 0111111222211 112235
Q ss_pred ccccEEEEEee-cCCcEEEEeccCCCcEEEEEeecCCC
Q 001070 274 EEAFFNQVVVL-SQAGLLLFANAKKNAIYSVHLGYGNN 310 (1165)
Q Consensus 274 ~~aff~sV~~~-p~a~~ilLan~~r~aIYalhl~~g~~ 310 (1165)
|...+..|... +++..|+-+ ..-+.|+...+..++.
T Consensus 253 ~~~~v~~v~~~~~dg~~l~s~-s~d~~i~vwd~~~~~~ 289 (393)
T 4gq1_A 253 IASSLANVRWIGSDGSGILAM-CKSGAWLRWNLFANND 289 (393)
T ss_dssp CSSSCSEEEEETTTTCEEEEE-CTTSEEEEEEC-----
T ss_pred ccccceeeeeecCCCCEEEEE-eCCCCEEEEECccCCC
Confidence 66667778765 677766544 4455666666655443
No 79
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.02 E-value=7.5e-09 Score=106.85 Aligned_cols=159 Identities=18% Similarity=0.347 Sum_probs=107.4
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc-----------------------------------------------
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------------------------------- 187 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------------------------------- 187 (1165)
||+||++|..||.|||||+.+ .....+.||+.
T Consensus 78 ~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (318)
T 4ggc_A 78 EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLR 157 (318)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEE
T ss_pred CCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEE
Confidence 689999999999999999998 55556777765
Q ss_pred ----------------EEEeecCCCc----eeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCC
Q 001070 188 ----------------IKIWEDSKVA----PLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEG 247 (1165)
Q Consensus 188 ----------------VriWD~~~g~----pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~ 247 (1165)
|+|||.+++. .+.....|. ..|.+++| .|++.. .+.+.+|+.+++|+||+....
T Consensus 158 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~v~~~~~--~~~~~~-~~~~~~~~~~~~i~lwd~~~~-- 231 (318)
T 4ggc_A 158 WAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ-GAVKAVAW--CPWQSN-VLATGGGTSDRHIRIWNVCSG-- 231 (318)
T ss_dssp ECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCC-SCEEEEEE--CTTSTT-EEEEEECTTTCEEEEEETTTC--
T ss_pred EcCCCCEEEEEecCcceeEEECCCCcccccceeeecccC-CceEEEEe--cCCCCc-EEEEEecCCCCEEEEEecccc--
Confidence 8888888764 244454443 38899999 476666 335668999999999997444
Q ss_pred CCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEec-cCCCcEEEEEeecCCCcccccccccccccc-c
Q 001070 248 WSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFAN-AKKNAIYSVHLGYGNNSAATRIDYIAEFTV-T 325 (1165)
Q Consensus 248 ~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan-~~r~aIYalhl~~g~~~~~~r~dyiaeF~v-~ 325 (1165)
.+...+.. ..-+..+...|.+++++++. .....||...+..+. .+.+|.- .
T Consensus 232 ----------~~~~~~~~---------~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~--------~~~~l~gH~ 284 (318)
T 4ggc_A 232 ----------ACLSAVDA---------HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--------KVAELKGHT 284 (318)
T ss_dssp ----------CEEEEEEC---------SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--------EEEEECCCS
T ss_pred ----------cccccccc---------eeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc--------EEEEEcCCC
Confidence 56655552 33455778899999888765 456778877664321 2233321 3
Q ss_pred cceeeeeeccCC------CCcceEEEEE
Q 001070 326 MPVLSFTGTIDP------PSEHIIKLYC 347 (1165)
Q Consensus 326 ~PILSft~~~d~------~ge~~vq~yC 347 (1165)
-+|.++....|+ ...+.|+|+=
T Consensus 285 ~~V~~l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 285 SRVLSLTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 466666555444 1224566653
No 80
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.02 E-value=3.9e-10 Score=131.99 Aligned_cols=126 Identities=10% Similarity=0.087 Sum_probs=91.6
Q ss_pred CceEEEeecCCcEEEEeCcchhh------------HhhcCCcc---------------------EEEeecCCC-ceeEEe
Q 001070 157 KHYVCYGLKGGNVRVLNLNTATR------------SLLRGHTK---------------------IKIWEDSKV-APLIIL 202 (1165)
Q Consensus 157 ~~yIayG~kdg~IRVwdi~t~ir------------~llrGH~q---------------------VriWD~~~g-~pl~~l 202 (1165)
+.+||+|..||.|||||+.+... ..|+||+. |+|||++++ .|+..+
T Consensus 225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~ 304 (524)
T 2j04_B 225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYD 304 (524)
T ss_dssp SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEE
T ss_pred CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEe
Confidence 57999999999999999986311 25788876 999999976 678889
Q ss_pred cCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEE
Q 001070 203 KPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVV 282 (1165)
Q Consensus 203 ephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~ 282 (1165)
..|+ ..|++|+|...|++. . ++++|+.|++|||||+..+ +|.+++..+... .-++.|+
T Consensus 305 ~~H~-~~V~sv~~~~s~~g~--~-~laS~S~D~tvklWD~~~~------------~~~~~~~~~~~~------~~v~~v~ 362 (524)
T 2j04_B 305 QVHD-SYILSVSTAYSDFED--T-VVSTVAVDGYFYIFNPKDI------------ATTKTTVSRFRG------SNLVPVV 362 (524)
T ss_dssp ECSS-SCEEEEEEECCTTSC--C-EEEEEETTSEEEEECGGGH------------HHHCEEEEECSC------CSCCCEE
T ss_pred eccc-ccEEEEEEEcCCCCC--e-EEEEeccCCeEEEEECCCC------------Cccccccccccc------CcccceE
Confidence 9886 489999432244432 2 5667999999999998544 888888753211 1245789
Q ss_pred eecCCcEEEEeccCCCcEEEEEe
Q 001070 283 VLSQAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 283 ~~p~a~~ilLan~~r~aIYalhl 305 (1165)
.+|++..++.+... ..|+..-+
T Consensus 363 fsp~~~~l~s~~~d-~tv~lwd~ 384 (524)
T 2j04_B 363 YCPQIYSYIYSDGA-SSLRAVPS 384 (524)
T ss_dssp EETTTTEEEEECSS-SEEEEEET
T ss_pred eCCCcCeEEEeCCC-CcEEEEEC
Confidence 99999886665544 34555543
No 81
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.02 E-value=4.4e-09 Score=109.99 Aligned_cols=126 Identities=16% Similarity=0.172 Sum_probs=99.1
Q ss_pred eecCceEEEeecCCcEEEEeCcc--hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCC
Q 001070 154 AVNKHYVCYGLKGGNVRVLNLNT--ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQP 209 (1165)
Q Consensus 154 AVn~~yIayG~kdg~IRVwdi~t--~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~s 209 (1165)
..||++|++|..||.|+|||+.+ .....+.+|.. |+|||.+++.++..+.. +..
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--~~~ 261 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET--DCP 261 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--SSC
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecC--CCC
Confidence 34799999999999999999997 55557888877 99999999999998883 458
Q ss_pred cceeEeecCCCCCCceEEEeecCCCc-------------eEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccc
Q 001070 210 VNSAQYLTAPNQAGHIILVTAGPLNR-------------EVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEA 276 (1165)
Q Consensus 210 V~SVaFl~aP~~~d~~~lvtsGslnr-------------tIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~a 276 (1165)
+.+++|. |++ .++++++..+. +|++|+...+ +++.++.. |..
T Consensus 262 ~~~~~~~--~~~---~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~------------~~~~~~~~--------~~~ 316 (369)
T 3zwl_B 262 LNTAVIT--PLK---EFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE------------EEIGRVQG--------HFG 316 (369)
T ss_dssp EEEEEEC--SSS---SEEEEEECCC-------------CEEEEEETTTC------------CEEEEEEC--------CSS
T ss_pred ceeEEec--CCC---ceEEEeecCCCceEEEEecCCCcceeEEEecCCC------------cchhheec--------ccC
Confidence 9999994 444 55776554433 8999997443 88888884 667
Q ss_pred cEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 277 FFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 277 ff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
-+..++++|++.+|+.+... ..|+...+..
T Consensus 317 ~v~~~~~s~~~~~l~s~~~d-g~v~iw~~~~ 346 (369)
T 3zwl_B 317 PLNTVAISPQGTSYASGGED-GFIRLHHFEK 346 (369)
T ss_dssp CEEEEEECTTSSEEEEEETT-SEEEEEEECH
T ss_pred cEEEEEECCCCCEEEEEcCC-CeEEEEECcc
Confidence 78899999999988877654 5677777764
No 82
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.01 E-value=3.2e-09 Score=114.11 Aligned_cols=134 Identities=18% Similarity=0.185 Sum_probs=100.7
Q ss_pred cEeeec---CceEEEeecCCcEEEEeCcc-hhhHhhcCC------c--------------------------cEEEeecC
Q 001070 151 RQIAVN---KHYVCYGLKGGNVRVLNLNT-ATRSLLRGH------T--------------------------KIKIWEDS 194 (1165)
Q Consensus 151 R~IAVn---~~yIayG~kdg~IRVwdi~t-~ir~llrGH------~--------------------------qVriWD~~ 194 (1165)
+.++.+ +.+|++|..||.|+|||+.+ .....+..| . .|+|||.+
T Consensus 169 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~ 248 (416)
T 2pm9_A 169 ISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLR 248 (416)
T ss_dssp CEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETT
T ss_pred eEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCC
Confidence 345553 68999999999999999987 444455554 2 28999999
Q ss_pred CC-ceeEEec-CCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCc
Q 001070 195 KV-APLIILK-PHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPR 272 (1165)
Q Consensus 195 ~g-~pl~~le-phdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~ 272 (1165)
++ .++..+. +|. ..|++++| .|+ ++.+|+ +|+.|++|+|||+.. ++|+.++..
T Consensus 249 ~~~~~~~~~~~~~~-~~v~~~~~--s~~--~~~~l~-s~~~dg~v~~wd~~~------------~~~~~~~~~------- 303 (416)
T 2pm9_A 249 NANTPLQTLNQGHQ-KGILSLDW--CHQ--DEHLLL-SSGRDNTVLLWNPES------------AEQLSQFPA------- 303 (416)
T ss_dssp STTSCSBCCCSCCS-SCEEEEEE--CSS--CSSCEE-EEESSSEEEEECSSS------------CCEEEEEEC-------
T ss_pred CCCCCcEEeecCcc-CceeEEEe--CCC--CCCeEE-EEeCCCCEEEeeCCC------------CccceeecC-------
Confidence 86 7888888 784 48999999 452 234355 577899999999844 389999984
Q ss_pred cccccEEEEEeecCCcEEEEeccCCCcEEEEEeecCCC
Q 001070 273 VEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNN 310 (1165)
Q Consensus 273 ~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~g~~ 310 (1165)
|...+..++++|++..+|++......|+...+..+..
T Consensus 304 -~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 304 -RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp -SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred -CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 5667778999999955555556667788888876554
No 83
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.01 E-value=1.3e-09 Score=135.69 Aligned_cols=129 Identities=16% Similarity=0.250 Sum_probs=104.7
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCC
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQP 209 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~s 209 (1165)
++-||+||++|..||.|+|||+.+ .....|+||+. |+|||..+|.++.++.+|. ..
T Consensus 623 ~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-~~ 701 (1249)
T 3sfz_A 623 FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHS-EQ 701 (1249)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS-SC
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCC-Cc
Confidence 334799999999999999999998 65667889987 9999999999999999985 59
Q ss_pred cceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcE
Q 001070 210 VNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGL 289 (1165)
Q Consensus 210 V~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ 289 (1165)
|.+++|. |++.. . ++++|+.|++|++||+..+ +|+.++.+ |...+..++++|++.+
T Consensus 702 v~~~~~~--~~~~~-~-~l~sg~~d~~v~vwd~~~~------------~~~~~~~~--------h~~~v~~~~~sp~~~~ 757 (1249)
T 3sfz_A 702 VNCCHFT--NKSNH-L-LLATGSNDFFLKLWDLNQK------------ECRNTMFG--------HTNSVNHCRFSPDDEL 757 (1249)
T ss_dssp EEEEEEC--SSSSC-C-EEEEEETTSCEEEEETTSS------------SEEEEECC--------CSSCEEEEEECSSTTE
T ss_pred EEEEEEe--cCCCc-e-EEEEEeCCCeEEEEECCCc------------chhheecC--------CCCCEEEEEEecCCCE
Confidence 9999994 54332 3 4557899999999998544 89999984 6778889999999998
Q ss_pred EEEeccCCCcEEEEEeec
Q 001070 290 LLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 290 ilLan~~r~aIYalhl~~ 307 (1165)
|+.+... ..|+...+..
T Consensus 758 l~s~s~d-g~v~vwd~~~ 774 (1249)
T 3sfz_A 758 LASCSAD-GTLRLWDVRS 774 (1249)
T ss_dssp EEEEESS-SEEEEEEGGG
T ss_pred EEEEECC-CeEEEEeCCC
Confidence 7776554 4566666544
No 84
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.01 E-value=1.2e-09 Score=123.68 Aligned_cols=120 Identities=19% Similarity=0.287 Sum_probs=97.7
Q ss_pred ecCceEEEeecCCcEEEEeCcchhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCCcce
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNTATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQPVNS 212 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~sV~S 212 (1165)
-||+||++|..||.|||||++......+.||+. |+|||. ++..+..+.+|. ..|.+
T Consensus 395 ~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~-~~v~~ 472 (577)
T 2ymu_A 395 PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHS-SSVRG 472 (577)
T ss_dssp TTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCS-SCEEE
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCC-CCEEE
Confidence 379999999999999999988776677889987 999995 567799999985 48999
Q ss_pred eEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEE
Q 001070 213 AQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLF 292 (1165)
Q Consensus 213 VaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilL 292 (1165)
++| +|+ +++|+ +|+.|++|+||+. .++|+++|.+ |..-++.|+++|++.+|+.
T Consensus 473 ~~~--spd---~~~la-s~~~d~~i~iw~~-------------~~~~~~~~~~--------h~~~v~~l~~s~dg~~l~s 525 (577)
T 2ymu_A 473 VAF--SPD---GQTIA-SASDDKTVKLWNR-------------NGQLLQTLTG--------HSSSVRGVAFSPDGQTIAS 525 (577)
T ss_dssp EEE--CTT---SCEEE-EEETTSEEEEEET-------------TSCEEEEEEC--------CSSCEEEEEECTTSSCEEE
T ss_pred EEE--cCC---CCEEE-EEeCCCEEEEEcC-------------CCCEEEEEeC--------CCCCEEEEEEcCCCCEEEE
Confidence 999 454 45455 5889999999995 2389999985 5667889999999999988
Q ss_pred eccCCCcEEEEE
Q 001070 293 ANAKKNAIYSVH 304 (1165)
Q Consensus 293 an~~r~aIYalh 304 (1165)
+...+ .|+...
T Consensus 526 ~~~dg-~v~lwd 536 (577)
T 2ymu_A 526 ASDDK-TVKLWN 536 (577)
T ss_dssp EETTS-EEEEEC
T ss_pred EECcC-EEEEEe
Confidence 87654 465553
No 85
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.01 E-value=2.2e-09 Score=132.90 Aligned_cols=128 Identities=9% Similarity=0.111 Sum_probs=93.0
Q ss_pred ecCceEEEeecCCcEEEEeCcc-hhhH-----------hhcCCcc----------------------EEEeecCCC----
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNT-ATRS-----------LLRGHTK----------------------IKIWEDSKV---- 196 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t-~ir~-----------llrGH~q----------------------VriWD~~~g---- 196 (1165)
.||++|++|..||.||+||+.+ .++. +-+||.. |||||..++
T Consensus 445 pdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~ 524 (902)
T 2oaj_A 445 EYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYS 524 (902)
T ss_dssp SEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--
T ss_pred ccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccC
Confidence 4799999999999999999987 3332 1238876 999998765
Q ss_pred -----------------------------------------ceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCc
Q 001070 197 -----------------------------------------APLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNR 235 (1165)
Q Consensus 197 -----------------------------------------~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnr 235 (1165)
.|+.+++.|.| +|++|+| +|+| +|++|+.|+
T Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~-~V~svaf--SpdG-----~lAsgs~D~ 596 (902)
T 2oaj_A 525 VENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKG-KTSAINN--SNIG-----FVGIAYAAG 596 (902)
T ss_dssp -------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSC-SEEEEEE--CBTS-----EEEEEETTS
T ss_pred ccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCC-cEEEEEe--cCCc-----EEEEEeCCC
Confidence 35788988864 8999999 4555 355699999
Q ss_pred eEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCC-ccccccEEEEEee-----cCC---cEEEEeccCCCcEEEEEee
Q 001070 236 EVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKP-RVEEAFFNQVVVL-----SQA---GLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 236 tIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~-~~~~aff~sV~~~-----p~a---~~ilLan~~r~aIYalhl~ 306 (1165)
+|+|||+.+. .++.+-.+. .. .+|.+.+.+|+++ ||+ .||+.+ ..-..|+...+.
T Consensus 597 tv~lwd~~~~------------~~~~~~~~~---~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sg-s~D~tv~~wd~~ 660 (902)
T 2oaj_A 597 SLMLIDRRGP------------AIIYMENIR---EISGAQSACVTCIEFVIMEYGDDGYSSILMVCG-TDMGEVITYKIL 660 (902)
T ss_dssp EEEEEETTTT------------EEEEEEEGG---GTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEE-ETTSEEEEEEEE
T ss_pred cEEEEECCCC------------eEEEEeehh---HhccccccceEEEEEEEEecCCCCCcceEEEEE-ecCCcEEEEEEe
Confidence 9999997443 333322210 11 1588999999999 886 555444 555788888883
No 86
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.01 E-value=1.8e-09 Score=115.23 Aligned_cols=134 Identities=9% Similarity=0.149 Sum_probs=101.0
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc---------------------EEEeecCCCceeEEecCCCCCCccee
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK---------------------IKIWEDSKVAPLIILKPHGGQPVNSA 213 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q---------------------VriWD~~~g~pl~~lephdG~sV~SV 213 (1165)
|++||++|..||.|+|||+.+ .....+.+|.. |+|||.+++.++..+..|+ ..|.++
T Consensus 258 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~i~~~ 336 (425)
T 1r5m_A 258 TNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDG-VPIFAG 336 (425)
T ss_dssp TTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTT-CCEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCC-ccEEEE
Confidence 689999999999999999998 66677888876 9999999999999999885 499999
Q ss_pred EeecCCCCCCceEEEeecCCCceEEEeEccCcCCCC---CCCC-----CCCcceEEEEeccCCCCCccccc--cEEEEEe
Q 001070 214 QYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWS---LPTH-----AESWKCTQTLDLKSSAKPRVEEA--FFNQVVV 283 (1165)
Q Consensus 214 aFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~---~~~~-----~~~w~C~QTLe~~~s~~~~~~~a--ff~sV~~ 283 (1165)
+| .|++ .+|+ +|+.|++|+||++....... .... ...+.|+.++.. |.. .+..+++
T Consensus 337 ~~--s~~~---~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~v~~~~~ 402 (425)
T 1r5m_A 337 RI--SQDG---QKYA-VAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS--------SQDNDYIFDLSW 402 (425)
T ss_dssp EE--CTTS---SEEE-EEETTSCEEEEECHHHHC--------------CEECCEEEEECC--------TTCCCCEEEEEE
T ss_pred EE--cCCC---CEEE-EEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcC--------cccCCceEEEEc
Confidence 99 4544 5455 57789999999997653100 0000 012348888885 433 7889999
Q ss_pred ecCCcEEEEeccCCCcEEEEEe
Q 001070 284 LSQAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 284 ~p~a~~ilLan~~r~aIYalhl 305 (1165)
+|++.+|+.+... ..||...+
T Consensus 403 s~~~~~l~~~~~d-g~i~iw~~ 423 (425)
T 1r5m_A 403 NCAGNKISVAYSL-QEGSVVAI 423 (425)
T ss_dssp CTTSSEEEEEESS-SCCEEEEC
T ss_pred cCCCceEEEEecC-ceEEEEee
Confidence 9999988877654 45666554
No 87
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.01 E-value=9.3e-09 Score=111.97 Aligned_cols=130 Identities=8% Similarity=0.114 Sum_probs=91.8
Q ss_pred EeeecCceEEEeecCCcEEEEeCcch--hhHhhc-----------------CCcc--EEEeecCCCc-------------
Q 001070 152 QIAVNKHYVCYGLKGGNVRVLNLNTA--TRSLLR-----------------GHTK--IKIWEDSKVA------------- 197 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg~IRVwdi~t~--ir~llr-----------------GH~q--VriWD~~~g~------------- 197 (1165)
.++.++.+++.+ -|+.|||||+.+. ....+. |... |+|||..++.
T Consensus 105 ~v~~~~~~~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~ 183 (355)
T 3vu4_A 105 DLFLSREFIVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKA 183 (355)
T ss_dssp EEEECSSEEEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC---------------
T ss_pred EEEEcCCEEEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccc
Confidence 355566666554 3778899988864 111111 4444 9999999865
Q ss_pred --e-eEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCce-EEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcc
Q 001070 198 --P-LIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNRE-VKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRV 273 (1165)
Q Consensus 198 --p-l~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrt-IKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~ 273 (1165)
| +..+++|. ..|++++| .|++ .+|+ +|+.|++ |||||+.. ++|+.+|... .
T Consensus 184 ~~p~~~~~~~h~-~~v~~~~~--s~~g---~~l~-s~s~d~~~v~iwd~~~------------~~~~~~~~~g------~ 238 (355)
T 3vu4_A 184 ILGKGVLIKAHT-NPIKMVRL--NRKS---DMVA-TCSQDGTIIRVFKTED------------GVLVREFRRG------L 238 (355)
T ss_dssp ---CCEEECCCS-SCEEEEEE--CTTS---SEEE-EEETTCSEEEEEETTT------------CCEEEEEECT------T
T ss_pred cCcccEEEEccC-CceEEEEE--CCCC---CEEE-EEeCCCCEEEEEECCC------------CcEEEEEEcC------C
Confidence 4 88999985 48999999 4544 5355 6889999 99999854 4899999820 1
Q ss_pred ccccEEEEEeecCCcEEEEeccCCCcEEEEEeecC
Q 001070 274 EEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYG 308 (1165)
Q Consensus 274 ~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~g 308 (1165)
|..-++.++++|++.+|+.+... ..|+...+..+
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d-~~v~iw~~~~~ 272 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDK-WTLHVFEIFND 272 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETT-CEEEEEESSCC
T ss_pred CCCcEEEEEECCCCCEEEEEECC-CEEEEEEccCC
Confidence 66788899999999988777554 56777766544
No 88
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.00 E-value=4.8e-09 Score=110.76 Aligned_cols=127 Identities=9% Similarity=0.082 Sum_probs=98.0
Q ss_pred cCceEEEeecCCcEEEEeCcch---hhHhhcCCcc----------------------EEEeecCCCceeEE--ecCCCCC
Q 001070 156 NKHYVCYGLKGGNVRVLNLNTA---TRSLLRGHTK----------------------IKIWEDSKVAPLII--LKPHGGQ 208 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t~---ir~llrGH~q----------------------VriWD~~~g~pl~~--lephdG~ 208 (1165)
||+||++|..||.|+|||+.+. ....|.||.. |+|||..++..... +..| +.
T Consensus 19 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~ 97 (372)
T 1k8k_C 19 DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRI-NR 97 (372)
T ss_dssp TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCC-SS
T ss_pred CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecC-CC
Confidence 6899999999999999999984 6778899987 99999998865444 3556 45
Q ss_pred CcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCc
Q 001070 209 PVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAG 288 (1165)
Q Consensus 209 sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~ 288 (1165)
.|++++|. |++ .+|+ +|+.|++|++|++..+. .|.+..++.. +|...+..++++|++.
T Consensus 98 ~v~~~~~~--~~~---~~l~-~~~~d~~v~i~d~~~~~---------~~~~~~~~~~-------~~~~~i~~~~~~~~~~ 155 (372)
T 1k8k_C 98 AARCVRWA--PNE---KKFA-VGSGSRVISICYFEQEN---------DWWVCKHIKK-------PIRSTVLSLDWHPNSV 155 (372)
T ss_dssp CEEEEEEC--TTS---SEEE-EEETTSSEEEEEEETTT---------TEEEEEEECT-------TCCSCEEEEEECTTSS
T ss_pred ceeEEEEC--CCC---CEEE-EEeCCCEEEEEEecCCC---------cceeeeeeec-------ccCCCeeEEEEcCCCC
Confidence 89999994 544 4455 57789999999997763 3456666643 4667788999999999
Q ss_pred EEEEeccCCCcEEEEEee
Q 001070 289 LLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 289 ~ilLan~~r~aIYalhl~ 306 (1165)
+|+.+.. ...||...+.
T Consensus 156 ~l~~~~~-dg~i~~~d~~ 172 (372)
T 1k8k_C 156 LLAAGSC-DFKCRIFSAY 172 (372)
T ss_dssp EEEEEET-TSCEEEEECC
T ss_pred EEEEEcC-CCCEEEEEcc
Confidence 8887765 4567776654
No 89
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.00 E-value=2.4e-09 Score=109.94 Aligned_cols=123 Identities=14% Similarity=0.180 Sum_probs=96.6
Q ss_pred cCceEEEeecCCcEEEEeCcchhhHhhcCCcc---------------------EEEeecCCCceeEEecCCCCCCcceeE
Q 001070 156 NKHYVCYGLKGGNVRVLNLNTATRSLLRGHTK---------------------IKIWEDSKVAPLIILKPHGGQPVNSAQ 214 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t~ir~llrGH~q---------------------VriWD~~~g~pl~~lephdG~sV~SVa 214 (1165)
++++|++|..||.|+|||....++.+...|.. |+|||.+++.++..+++|. ..|++++
T Consensus 154 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~~~ 232 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHE-SFVYCIK 232 (313)
T ss_dssp TTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEE
T ss_pred CCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCC-ceEEEEE
Confidence 79999999999999999965544433332655 9999999999999999985 4899999
Q ss_pred eecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEec
Q 001070 215 YLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFAN 294 (1165)
Q Consensus 215 Fl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan 294 (1165)
| .|++ + ++ +|+.|++|+|||+..+ +|.+++.. +..-+..++++|++.++ +-
T Consensus 233 ~--~~~~---~-l~-~~~~dg~v~iwd~~~~------------~~~~~~~~--------~~~~i~~~~~~~~~~~~--~~ 283 (313)
T 3odt_A 233 L--LPNG---D-IV-SCGEDRTVRIWSKENG------------SLKQVITL--------PAISIWSVDCMSNGDII--VG 283 (313)
T ss_dssp E--CTTS---C-EE-EEETTSEEEEECTTTC------------CEEEEEEC--------SSSCEEEEEECTTSCEE--EE
T ss_pred E--ecCC---C-EE-EEecCCEEEEEECCCC------------ceeEEEec--------cCceEEEEEEccCCCEE--EE
Confidence 9 4655 3 55 5778999999998544 89999985 45567899999999944 34
Q ss_pred cCCCcEEEEEeecC
Q 001070 295 AKKNAIYSVHLGYG 308 (1165)
Q Consensus 295 ~~r~aIYalhl~~g 308 (1165)
.....||...+..+
T Consensus 284 ~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 284 SSDNLVRIFSQEKS 297 (313)
T ss_dssp ETTSCEEEEESCGG
T ss_pred eCCCcEEEEeCCCC
Confidence 45677888887754
No 90
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.99 E-value=2.4e-09 Score=118.24 Aligned_cols=125 Identities=16% Similarity=0.240 Sum_probs=99.6
Q ss_pred EeeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCC
Q 001070 152 QIAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQ 208 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~ 208 (1165)
.++.+++||++|..||.|||||+.+ .....|.||.. |+|||.++|.++.++++|. .
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~ 353 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHT-A 353 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCS-S
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCC-C
Confidence 3567899999999999999999998 66667889987 9999999999999999985 4
Q ss_pred CcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCc
Q 001070 209 PVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAG 288 (1165)
Q Consensus 209 sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~ 288 (1165)
.|.+++|. + .+|+ +|+.|++|++||+... .+..++. +......+++.+++.
T Consensus 354 ~v~~~~~~-----~--~~l~-s~s~dg~v~vwd~~~~------------~~~~~~~---------~~~~~~~~~~~~~~~ 404 (464)
T 3v7d_B 354 LVGLLRLS-----D--KFLV-SAAADGSIRGWDANDY------------SRKFSYH---------HTNLSAITTFYVSDN 404 (464)
T ss_dssp CEEEEEEC-----S--SEEE-EEETTSEEEEEETTTC------------CEEEEEE---------CTTCCCEEEEEECSS
T ss_pred cEEEEEEc-----C--CEEE-EEeCCCcEEEEECCCC------------ceeeeec---------CCCCccEEEEEeCCC
Confidence 89999992 1 3345 6889999999998543 4555544 234455678899999
Q ss_pred EEEEeccCCCcEEEEEeecC
Q 001070 289 LLLFANAKKNAIYSVHLGYG 308 (1165)
Q Consensus 289 ~ilLan~~r~aIYalhl~~g 308 (1165)
+|+.+. ...|+...+..|
T Consensus 405 ~l~~~~--dg~i~iwd~~~g 422 (464)
T 3v7d_B 405 ILVSGS--ENQFNIYNLRSG 422 (464)
T ss_dssp EEEEEE--TTEEEEEETTTC
T ss_pred EEEEec--CCeEEEEECCCC
Confidence 988887 467888887654
No 91
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.99 E-value=9.3e-09 Score=105.52 Aligned_cols=184 Identities=11% Similarity=0.046 Sum_probs=114.3
Q ss_pred Cceee-cC----CceEEecccCCCCCCCCCCcccccccccCCCcccccccEeee--c--CceEEEeecCCcEEEEeCcc-
Q 001070 107 YGKRV-FG----DYVAYDVDAVEEGREPTQQLEVNPITKYGSDPELLIGRQIAV--N--KHYVCYGLKGGNVRVLNLNT- 176 (1165)
Q Consensus 107 ~Gr~l-~g----~~~~~dVd~~~~ge~~~pqlev~pIt~Y~sd~~~~~GR~IAV--n--~~yIayG~kdg~IRVwdi~t- 176 (1165)
+|++| .| .-.+||++....... .-...++..+...... -..|+. + ++||++|..||.|||||+.+
T Consensus 70 d~~~l~s~~~dg~v~vwd~~~~~~~~~---~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 70 YGRIIASASYDKTVKLWEEDPDQEECS---GRRWNKLCTLNDSKGS--LYSVKFAPAHLGLKLACLGNDGILRLYDALEP 144 (351)
T ss_dssp GCSEEEEEETTSCEEEEEECTTSCTTS---SCSEEEEEEECCCSSC--EEEEEECCGGGCSEEEEEETTCEEEEEECSST
T ss_pred CCCEEEEEcCCCeEEEEecCCCccccc---ccCcceeeeecccCCc--eeEEEEcCCCCCcEEEEecCCCcEEEecCCCh
Confidence 37777 43 345788877543211 1112233333322211 223444 4 88999999999999999987
Q ss_pred hhhHhhc-------------CCcc-------------------------EEEeecCCCce--eEEecCCCCCCcceeEee
Q 001070 177 ATRSLLR-------------GHTK-------------------------IKIWEDSKVAP--LIILKPHGGQPVNSAQYL 216 (1165)
Q Consensus 177 ~ir~llr-------------GH~q-------------------------VriWD~~~g~p--l~~lephdG~sV~SVaFl 216 (1165)
.....+. +|.. +.+|+...+.. +..+..|. ..|++++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~~~~- 222 (351)
T 3f3f_A 145 SDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHK-SLIRSISW- 222 (351)
T ss_dssp TCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCC-SCEEEEEE-
T ss_pred HHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCC-cceeEEEE-
Confidence 3222222 2221 76777776654 77888775 49999999
Q ss_pred cCCCCCC-ceEEEeecCCCceEEEeEccCcCCCCC----------------------------------CCCCCCcceEE
Q 001070 217 TAPNQAG-HIILVTAGPLNREVKLWASASEEGWSL----------------------------------PTHAESWKCTQ 261 (1165)
Q Consensus 217 ~aP~~~d-~~~lvtsGslnrtIKLW~~a~~~~~~~----------------------------------~~~~~~w~C~Q 261 (1165)
.|+++. .. ++++|+.|++|+|||+..+..-.. ..+...++|+.
T Consensus 223 -~p~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (351)
T 3f3f_A 223 -APSIGRWYQ-LIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLS 300 (351)
T ss_dssp -CCCSSCSSE-EEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEE
T ss_pred -CCCCCCcce-EEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEE
Confidence 566532 14 455688999999999976421000 00111246777
Q ss_pred EEeccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeecC
Q 001070 262 TLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYG 308 (1165)
Q Consensus 262 TLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~g 308 (1165)
++. +|..-+..++++|++.+|+.+... ..|+...+..+
T Consensus 301 ~~~--------~h~~~v~~~~~s~~~~~l~s~~~d-g~v~iw~~~~~ 338 (351)
T 3f3f_A 301 EHD--------DHNGEVWSVSWNLTGTILSSAGDD-GKVRLWKATYS 338 (351)
T ss_dssp EEC--------TTSSCEEEEEECSSSCCEEEEETT-SCEEEEEECTT
T ss_pred EEe--------cccccEEEEEEcCCCCEEEEecCC-CcEEEEecCcC
Confidence 776 477788999999999988877654 56777777754
No 92
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.99 E-value=7e-09 Score=107.37 Aligned_cols=160 Identities=13% Similarity=0.151 Sum_probs=111.3
Q ss_pred ecCceEEEeecCCcEEEEeCcc-hhhH---hhc--CCcc----------------------EEEeecCCCc--eeEEecC
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNT-ATRS---LLR--GHTK----------------------IKIWEDSKVA--PLIILKP 204 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t-~ir~---llr--GH~q----------------------VriWD~~~g~--pl~~lep 204 (1165)
-||+||++|. ||.|+|||+.+ .... .+. +|.. |+|||..++. .+..+..
T Consensus 61 ~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 139 (337)
T 1gxr_A 61 NPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTS 139 (337)
T ss_dssp SSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEEC
T ss_pred cCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeeccc
Confidence 3699999999 99999999987 2222 222 6665 9999999886 5777777
Q ss_pred CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEee
Q 001070 205 HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVL 284 (1165)
Q Consensus 205 hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~ 284 (1165)
|. ..|++++|. |+ +.+++ +|+.|++|++||+..+ +++.++.. |..-+..++++
T Consensus 140 ~~-~~i~~~~~~--~~---~~~l~-~~~~dg~v~~~d~~~~------------~~~~~~~~--------~~~~i~~~~~~ 192 (337)
T 1gxr_A 140 SA-PACYALAIS--PD---SKVCF-SCCSDGNIAVWDLHNQ------------TLVRQFQG--------HTDGASCIDIS 192 (337)
T ss_dssp SS-SCEEEEEEC--TT---SSEEE-EEETTSCEEEEETTTT------------EEEEEECC--------CSSCEEEEEEC
T ss_pred CC-CceEEEEEC--CC---CCEEE-EEeCCCcEEEEeCCCC------------ceeeeeec--------ccCceEEEEEC
Confidence 74 489999994 44 34455 5778999999998443 78888874 56678899999
Q ss_pred cCCcEEEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC------CCcceEEEEEeehh
Q 001070 285 SQAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP------PSEHIIKLYCVQTQ 351 (1165)
Q Consensus 285 p~a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~------~ge~~vq~yCvQtq 351 (1165)
|++.+|+.+.. ...||...+..+ ..+..|....+|.++....++ ...+.|++|-+.+.
T Consensus 193 ~~~~~l~~~~~-dg~i~~~d~~~~--------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~ 256 (337)
T 1gxr_A 193 NDGTKLWTGGL-DNTVRSWDLREG--------RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP 256 (337)
T ss_dssp TTSSEEEEEET-TSEEEEEETTTT--------EEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS
T ss_pred CCCCEEEEEec-CCcEEEEECCCC--------ceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 99998887764 456777666532 223345556677766655444 12345677665543
No 93
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.98 E-value=7.8e-09 Score=111.07 Aligned_cols=163 Identities=12% Similarity=0.111 Sum_probs=115.5
Q ss_pred Eeee--cCceEEE-eecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCC
Q 001070 152 QIAV--NKHYVCY-GLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 152 ~IAV--n~~yIay-G~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~leph 205 (1165)
.+++ ||++|++ |..++.|+|||+.+ .....+.+|.. |++||..++..+..+..|
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 157 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG 157 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC
Confidence 3444 6888865 55779999999998 55566666655 999999999988888764
Q ss_pred CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeec
Q 001070 206 GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS 285 (1165)
Q Consensus 206 dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p 285 (1165)
..+++++| .|++ ++|++++..+++|++||+.. ++|+.++.. ......++++|
T Consensus 158 --~~~~~~~~--~~dg---~~l~~~~~~~~~v~~~d~~~------------~~~~~~~~~---------~~~~~~~~~~~ 209 (391)
T 1l0q_A 158 --RSPKGIAV--TPDG---TKVYVANFDSMSISVIDTVT------------NSVIDTVKV---------EAAPSGIAVNP 209 (391)
T ss_dssp --SSEEEEEE--CTTS---SEEEEEETTTTEEEEEETTT------------TEEEEEEEC---------SSEEEEEEECT
T ss_pred --CCcceEEE--CCCC---CEEEEEeCCCCEEEEEECCC------------CeEEEEEec---------CCCccceEECC
Confidence 46899999 4554 44766788999999999844 388888874 34567889999
Q ss_pred CCcEEEEecc--CCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC-------CCcceEEEEEeeh
Q 001070 286 QAGLLLFANA--KKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP-------PSEHIIKLYCVQT 350 (1165)
Q Consensus 286 ~a~~ilLan~--~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~-------~ge~~vq~yCvQt 350 (1165)
++++|++++. ....||.+.+..+. -+..+.....+.++....|+ .+.+.|++|.+.+
T Consensus 210 ~g~~l~~~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 210 EGTKAYVTNVDKYFNTVSMIDTGTNK--------ITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp TSSEEEEEEECSSCCEEEEEETTTTE--------EEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCCEEEEEecCcCCCcEEEEECCCCe--------EEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 9999999987 67889988775321 12233333334444433333 2235677777665
No 94
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.98 E-value=5e-10 Score=131.10 Aligned_cols=119 Identities=14% Similarity=0.106 Sum_probs=92.7
Q ss_pred eee-cCceEEEeecCCcEEEEeCcch--hhHhhcCCcc-------------------------EEEeecCCCceeEEecC
Q 001070 153 IAV-NKHYVCYGLKGGNVRVLNLNTA--TRSLLRGHTK-------------------------IKIWEDSKVAPLIILKP 204 (1165)
Q Consensus 153 IAV-n~~yIayG~kdg~IRVwdi~t~--ir~llrGH~q-------------------------VriWD~~~g~pl~~lep 204 (1165)
++. ++.+|++|..||.|||||+.+. ....|+||+. |||||++++.++.++.+
T Consensus 272 v~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~ 351 (524)
T 2j04_B 272 FDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVS 351 (524)
T ss_dssp EEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEE
T ss_pred EEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccc
Confidence 444 3568999999999999999872 3345788865 99999999888778877
Q ss_pred CCC-CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEe
Q 001070 205 HGG-QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVV 283 (1165)
Q Consensus 205 hdG-~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~ 283 (1165)
|.. ..|++|+|. |++ ..++ +|+.|++|||||+.. +.|+.+|.+ |..-++.|+.
T Consensus 352 ~~~~~~v~~v~fs--p~~---~~l~-s~~~d~tv~lwd~~~------------~~~~~~l~g--------H~~~V~sva~ 405 (524)
T 2j04_B 352 RFRGSNLVPVVYC--PQI---YSYI-YSDGASSLRAVPSRA------------AFAVHPLVS--------RETTITAIGV 405 (524)
T ss_dssp ECSCCSCCCEEEE--TTT---TEEE-EECSSSEEEEEETTC------------TTCCEEEEE--------CSSCEEEEEC
T ss_pred ccccCcccceEeC--CCc---CeEE-EeCCCCcEEEEECcc------------cccceeeec--------CCCceEEEEe
Confidence 742 369999994 654 3355 577899999999844 389889884 7788999999
Q ss_pred ecCCcEEEEeccCC
Q 001070 284 LSQAGLLLFANAKK 297 (1165)
Q Consensus 284 ~p~a~~ilLan~~r 297 (1165)
+|++.+|+-+...+
T Consensus 406 Sp~g~~l~Sgs~Dg 419 (524)
T 2j04_B 406 SRLHPMVLAGSADG 419 (524)
T ss_dssp CSSCCBCEEEETTT
T ss_pred CCCCCeEEEEECCC
Confidence 99999877665443
No 95
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.97 E-value=4.5e-09 Score=112.12 Aligned_cols=160 Identities=9% Similarity=0.095 Sum_probs=114.1
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCc------------------------------------cEEEeecCCCce
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHT------------------------------------KIKIWEDSKVAP 198 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~------------------------------------qVriWD~~~g~p 198 (1165)
|++||++|..||.|+|||+.+ .....+..|. .|+|||.+++.+
T Consensus 160 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~ 239 (425)
T 1r5m_A 160 DGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTP 239 (425)
T ss_dssp TSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSC
T ss_pred CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCce
Confidence 699999999999999999987 4333444332 199999999999
Q ss_pred eEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccE
Q 001070 199 LIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFF 278 (1165)
Q Consensus 199 l~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff 278 (1165)
+..+..|. ..|++++|. |++ .+|+ +|+.|++|++|++..+ +|+.++.. |...+
T Consensus 240 ~~~~~~~~-~~i~~~~~~--~~~---~~l~-~~~~d~~i~i~d~~~~------------~~~~~~~~--------~~~~i 292 (425)
T 1r5m_A 240 TGKLIGHH-GPISVLEFN--DTN---KLLL-SASDDGTLRIWHGGNG------------NSQNCFYG--------HSQSI 292 (425)
T ss_dssp SEEECCCS-SCEEEEEEE--TTT---TEEE-EEETTSCEEEECSSSB------------SCSEEECC--------CSSCE
T ss_pred eeeeccCC-CceEEEEEC--CCC---CEEE-EEcCCCEEEEEECCCC------------ccceEecC--------CCccE
Confidence 99999885 489999994 544 4455 5779999999998544 77788863 56677
Q ss_pred EEEEeecCCcEEEEeccCCCcEEEEEeecCCCcccccccccccccc-ccceeeeeeccCC------CCcceEEEEEeehh
Q 001070 279 NQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTV-TMPVLSFTGTIDP------PSEHIIKLYCVQTQ 351 (1165)
Q Consensus 279 ~sV~~~p~a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v-~~PILSft~~~d~------~ge~~vq~yCvQtq 351 (1165)
..++++|++ +|++......||...+..+. .+..|.. ..+|.++....++ ...+.|++|-+.+.
T Consensus 293 ~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~--------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 293 VSASWVGDD--KVISCSMDGSVRLWSLKQNT--------LLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp EEEEEETTT--EEEEEETTSEEEEEETTTTE--------EEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHH
T ss_pred EEEEECCCC--EEEEEeCCCcEEEEECCCCc--------EeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 899999999 44455556678887765321 2233332 4466666555444 23457889988765
Q ss_pred h
Q 001070 352 A 352 (1165)
Q Consensus 352 A 352 (1165)
.
T Consensus 363 ~ 363 (425)
T 1r5m_A 363 N 363 (425)
T ss_dssp H
T ss_pred c
Confidence 4
No 96
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.96 E-value=8.4e-09 Score=110.49 Aligned_cols=134 Identities=12% Similarity=0.125 Sum_probs=95.1
Q ss_pred ecCce-EEEeecCCcEEEEeCcc------h-hhH-----hhcC-------Ccc---------------------EEEeec
Q 001070 155 VNKHY-VCYGLKGGNVRVLNLNT------A-TRS-----LLRG-------HTK---------------------IKIWED 193 (1165)
Q Consensus 155 Vn~~y-IayG~kdg~IRVwdi~t------~-ir~-----llrG-------H~q---------------------VriWD~ 193 (1165)
-++++ |++|..||.|+|||+.+ . ... .|.| |.. |+|||.
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~ 214 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISEL 214 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEET
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEEC
Confidence 45999 99999999999999987 2 222 4433 443 999999
Q ss_pred CCCceeEEecC---C--CCCCcceeEeecCCCCCCceEEEeecCCC---ceEEEeEccCcCCCCCCCCCCCcceEEEEec
Q 001070 194 SKVAPLIILKP---H--GGQPVNSAQYLTAPNQAGHIILVTAGPLN---REVKLWASASEEGWSLPTHAESWKCTQTLDL 265 (1165)
Q Consensus 194 ~~g~pl~~lep---h--dG~sV~SVaFl~aP~~~d~~~lvtsGsln---rtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~ 265 (1165)
+++.++..++. | .+..|++++| .|+ +.+|+ +|+.| ++|+|||+.. ++|+.++..
T Consensus 215 ~~~~~~~~~~~~~~h~~~~~~i~~i~~--~~~---~~~l~-~~~~d~~~g~i~i~d~~~------------~~~~~~~~~ 276 (397)
T 1sq9_A 215 STLRPLYNFESQHSMINNSNSIRSVKF--SPQ---GSLLA-IAHDSNSFGCITLYETEF------------GERIGSLSV 276 (397)
T ss_dssp TTTEEEEEEECCC---CCCCCEEEEEE--CSS---TTEEE-EEEEETTEEEEEEEETTT------------CCEEEEECB
T ss_pred CCCceeEEEeccccccccCCccceEEE--CCC---CCEEE-EEecCCCCceEEEEECCC------------Ccccceecc
Confidence 99999999998 7 1348999999 454 34455 57788 9999999844 388888875
Q ss_pred cCCCC-----CccccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 266 KSSAK-----PRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 266 ~~s~~-----~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
..... ...|...+..++++|++.+|+.+. ....|+...+..
T Consensus 277 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~ 322 (397)
T 1sq9_A 277 PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-WDGKLRFWDVKT 322 (397)
T ss_dssp C--------CCBSBSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTT
T ss_pred CcccccccccccccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCC
Confidence 21100 001677888999999999887776 445777777653
No 97
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.96 E-value=4.2e-09 Score=116.48 Aligned_cols=124 Identities=15% Similarity=0.186 Sum_probs=98.0
Q ss_pred EeeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc--------------------EEEeecCCCceeEEecCCCCCCc
Q 001070 152 QIAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK--------------------IKIWEDSKVAPLIILKPHGGQPV 210 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q--------------------VriWD~~~g~pl~~lephdG~sV 210 (1165)
-++.||+||++|..||.|||||+.+ .....|+||.. |+|||..++.++..+.+|. ..|
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~-~~v 202 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHT-STV 202 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCE
T ss_pred EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCC-CcE
Confidence 4777899999999999999999998 66668889987 9999999999999999885 489
Q ss_pred ceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEE
Q 001070 211 NSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLL 290 (1165)
Q Consensus 211 ~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~i 290 (1165)
.+++|- +. .+.+|+.|++|++||+..+ +|+.++.. |...+..+.. ++.+|
T Consensus 203 ~~~~~~-----~~---~l~s~s~dg~i~~wd~~~~------------~~~~~~~~--------~~~~v~~~~~--~~~~l 252 (445)
T 2ovr_B 203 RCMHLH-----EK---RVVSGSRDATLRVWDIETG------------QCLHVLMG--------HVAAVRCVQY--DGRRV 252 (445)
T ss_dssp EEEEEE-----TT---EEEEEETTSEEEEEESSSC------------CEEEEEEC--------CSSCEEEEEE--CSSCE
T ss_pred EEEEec-----CC---EEEEEeCCCEEEEEECCCC------------cEEEEEcC--------CcccEEEEEE--CCCEE
Confidence 999992 22 2446889999999998544 89999884 5566666665 66776
Q ss_pred EEeccCCCcEEEEEeec
Q 001070 291 LFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 291 lLan~~r~aIYalhl~~ 307 (1165)
+.+.. ...|+...+..
T Consensus 253 ~~~~~-dg~i~iwd~~~ 268 (445)
T 2ovr_B 253 VSGAY-DFMVKVWDPET 268 (445)
T ss_dssp EEEET-TSCEEEEEGGG
T ss_pred EEEcC-CCEEEEEECCC
Confidence 66654 45677766543
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.96 E-value=1.9e-09 Score=115.09 Aligned_cols=128 Identities=16% Similarity=0.281 Sum_probs=90.4
Q ss_pred CceEEEeecCCcEEEEeCcch----hhHhhcCCc-------------------------------------c--EEEeec
Q 001070 157 KHYVCYGLKGGNVRVLNLNTA----TRSLLRGHT-------------------------------------K--IKIWED 193 (1165)
Q Consensus 157 ~~yIayG~kdg~IRVwdi~t~----ir~llrGH~-------------------------------------q--VriWD~ 193 (1165)
|.||++|..||.|||||+.+. .+..+.||. . |||||.
T Consensus 117 g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~ 196 (316)
T 3bg1_A 117 GLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKE 196 (316)
T ss_dssp CSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEE
T ss_pred CcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEe
Confidence 789999999999999998762 134455553 1 999999
Q ss_pred CCC---ceeEEecCCCCCCcceeEeecCCCCC-CceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCC
Q 001070 194 SKV---APLIILKPHGGQPVNSAQYLTAPNQA-GHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSA 269 (1165)
Q Consensus 194 ~~g---~pl~~lephdG~sV~SVaFl~aP~~~-d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~ 269 (1165)
+++ .++..+++|. .+|++|+| +|++. +.. +|++|+.|++|+||++..... ..| +.+.+.
T Consensus 197 ~~~~~~~~~~~l~~h~-~~V~~v~~--sp~~~~~~~-~las~s~D~~v~iw~~~~~~~-------~~~-~~~~~~----- 259 (316)
T 3bg1_A 197 EEDGQWKEEQKLEAHS-DWVRDVAW--APSIGLPTS-TIASCSQDGRVFIWTCDDASS-------NTW-SPKLLH----- 259 (316)
T ss_dssp CTTSCEEEEECCBCCS-SCEEEEEC--CCCSSCSCC-EEEEEETTCEEEEEECSSTTC-------CCC-BCCEEE-----
T ss_pred CCCCccceeeecccCC-CceEEEEe--cCCCCCCCc-eEEEEcCCCeEEEEEccCccc-------cch-hhhhhh-----
Confidence 865 4678888885 48999999 57652 223 455799999999999865311 111 122333
Q ss_pred CCccccccEEEEEeecCCcEEEEeccCCCcEEEEEe
Q 001070 270 KPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 270 ~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl 305 (1165)
+|...+..|+.+|++.+|+.+...+ .|+...+
T Consensus 260 ---~~~~~v~~v~~sp~g~~las~~~D~-~v~lw~~ 291 (316)
T 3bg1_A 260 ---KFNDVVWHVSWSITANILAVSGGDN-KVTLWKE 291 (316)
T ss_dssp ---ECSSCEEEEEECTTTCCEEEEESSS-CEEEEEE
T ss_pred ---cCCCcEEEEEEcCCCCEEEEEcCCC-eEEEEEE
Confidence 3567788999999999988776554 4554444
No 99
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.96 E-value=1.7e-09 Score=113.08 Aligned_cols=115 Identities=12% Similarity=0.135 Sum_probs=88.8
Q ss_pred ecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------------------------------
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK---------------------------------------------- 187 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q---------------------------------------------- 187 (1165)
.|+++|++|..||.|||||+.+ .....+.+|..
T Consensus 139 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (368)
T 3mmy_A 139 PNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCV 218 (368)
T ss_dssp SSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEE
T ss_pred CCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceE
Confidence 3689999999999999999987 44344444431
Q ss_pred ---------------------EEEeecCCC---ceeEEecCCCCC-----------CcceeEeecCCCCCCceEEEeecC
Q 001070 188 ---------------------IKIWEDSKV---APLIILKPHGGQ-----------PVNSAQYLTAPNQAGHIILVTAGP 232 (1165)
Q Consensus 188 ---------------------VriWD~~~g---~pl~~lephdG~-----------sV~SVaFl~aP~~~d~~~lvtsGs 232 (1165)
|+|||.+.+ .++..++.|.+. +|.+++| .|++ .+|+ +|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--sp~~---~~l~-s~~ 292 (368)
T 3mmy_A 219 AIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAF--HPVH---GTLA-TVG 292 (368)
T ss_dssp EEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEE--CTTT---CCEE-EEE
T ss_pred EEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEE--ecCC---CEEE-EEc
Confidence 778887776 457778777543 6999999 4554 4466 577
Q ss_pred CCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEecc
Q 001070 233 LNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANA 295 (1165)
Q Consensus 233 lnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~ 295 (1165)
.|++|+|||+.. ++|+++|.. |...+..++++|++.+|+.+..
T Consensus 293 ~dg~i~iwd~~~------------~~~~~~~~~--------~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 293 SDGRFSFWDKDA------------RTKLKTSEQ--------LDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp TTSCEEEEETTT------------TEEEEECCC--------CSSCEEEEEECTTSSCEEEEEC
T ss_pred cCCeEEEEECCC------------CcEEEEecC--------CCCCceEEEECCCCCeEEEEec
Confidence 999999999844 489999884 6677889999999999998865
No 100
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.95 E-value=4.7e-09 Score=109.42 Aligned_cols=130 Identities=15% Similarity=0.208 Sum_probs=98.8
Q ss_pred CceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCCccee
Q 001070 157 KHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQPVNSA 213 (1165)
Q Consensus 157 ~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~sV~SV 213 (1165)
..++++|..|+.|||||+.+ .....+.||+. |+|||.+++.++..+..+ ..|.++
T Consensus 185 ~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~ 262 (340)
T 4aow_A 185 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINAL 262 (340)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS--SCEEEE
T ss_pred CcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC--ceEEee
Confidence 46789999999999999998 77778899987 999999999999999865 479999
Q ss_pred EeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCC-CCCccccccEEEEEeecCCcEEEE
Q 001070 214 QYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSS-AKPRVEEAFFNQVVVLSQAGLLLF 292 (1165)
Q Consensus 214 aFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s-~~~~~~~aff~sV~~~p~a~~ilL 292 (1165)
+|. |++ . +++ |+.|++|+|||+... .|+.++..... ....+|...++.++++|++++|+-
T Consensus 263 ~~~--~~~---~-~~~-~~~d~~i~iwd~~~~------------~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 323 (340)
T 4aow_A 263 CFS--PNR---Y-WLC-AATGPSIKIWDLEGK------------IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA 323 (340)
T ss_dssp EEC--SSS---S-EEE-EEETTEEEEEETTTT------------EEEEEECCC-------CCCCCEEEEEECTTSSEEEE
T ss_pred ecC--CCC---c-eee-ccCCCEEEEEECCCC------------eEEEeccccceeeeccCCCCCEEEEEECCCCCEEEE
Confidence 994 443 3 454 446999999998544 77777765332 122357788999999999999887
Q ss_pred eccCCCcEEEEEeecC
Q 001070 293 ANAKKNAIYSVHLGYG 308 (1165)
Q Consensus 293 an~~r~aIYalhl~~g 308 (1165)
+... ..||.-.+.-|
T Consensus 324 gs~D-g~v~iW~~~tG 338 (340)
T 4aow_A 324 GYTD-NLVRVWQVTIG 338 (340)
T ss_dssp EETT-SCEEEEEEEC-
T ss_pred EeCC-CEEEEEeCCCc
Confidence 7655 45777666644
No 101
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.95 E-value=1.9e-08 Score=107.96 Aligned_cols=123 Identities=10% Similarity=0.068 Sum_probs=93.5
Q ss_pred EEEeecCCcEEEEeCcch-----------hhHhhcCCcc------------------------EEEeecCCCceeEEecC
Q 001070 160 VCYGLKGGNVRVLNLNTA-----------TRSLLRGHTK------------------------IKIWEDSKVAPLIILKP 204 (1165)
Q Consensus 160 IayG~kdg~IRVwdi~t~-----------ir~llrGH~q------------------------VriWD~~~g~pl~~lep 204 (1165)
|++|..||.|||||.... ++....+|.. |+|||.+++.++..+..
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence 889999999999977631 2233334432 99999999998888877
Q ss_pred CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceE-EEEeccCCCCCccccccEEEEEe
Q 001070 205 HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCT-QTLDLKSSAKPRVEEAFFNQVVV 283 (1165)
Q Consensus 205 hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~-QTLe~~~s~~~~~~~aff~sV~~ 283 (1165)
+.+..|.+++| .|+ +. ++++|+.|++|+|||+..+ +|. .+|+. +|..-+..+++
T Consensus 168 ~~~~~i~~~~~--~pd---g~-~lasg~~dg~i~iwd~~~~------------~~~~~~~~~-------~h~~~v~~l~f 222 (343)
T 3lrv_A 168 KSDVEYSSGVL--HKD---SL-LLALYSPDGILDVYNLSSP------------DQASSRFPV-------DEEAKIKEVKF 222 (343)
T ss_dssp CSSCCCCEEEE--CTT---SC-EEEEECTTSCEEEEESSCT------------TSCCEECCC-------CTTSCEEEEEE
T ss_pred CCCCceEEEEE--CCC---CC-EEEEEcCCCEEEEEECCCC------------CCCccEEec-------cCCCCEEEEEE
Confidence 66668999999 454 45 3446889999999998554 565 66764 36778889999
Q ss_pred ecCCcEEEEeccCCCcEEEEEeecCC
Q 001070 284 LSQAGLLLFANAKKNAIYSVHLGYGN 309 (1165)
Q Consensus 284 ~p~a~~ilLan~~r~aIYalhl~~g~ 309 (1165)
+|++.+|+.+. .. .|+...+..+.
T Consensus 223 s~~g~~l~s~~-~~-~v~iwd~~~~~ 246 (343)
T 3lrv_A 223 ADNGYWMVVEC-DQ-TVVCFDLRKDV 246 (343)
T ss_dssp CTTSSEEEEEE-SS-BEEEEETTSST
T ss_pred eCCCCEEEEEe-CC-eEEEEEcCCCC
Confidence 99999999888 33 88888776543
No 102
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.95 E-value=7.3e-09 Score=110.96 Aligned_cols=137 Identities=15% Similarity=0.194 Sum_probs=100.2
Q ss_pred cEeee--cCceEEEeecCCcEEEEeCcc-hhhHhhcC---C---cc-------------------------EEEeecCCC
Q 001070 151 RQIAV--NKHYVCYGLKGGNVRVLNLNT-ATRSLLRG---H---TK-------------------------IKIWEDSKV 196 (1165)
Q Consensus 151 R~IAV--n~~yIayG~kdg~IRVwdi~t-~ir~llrG---H---~q-------------------------VriWD~~~g 196 (1165)
+.+++ || +|++|..||.|+|||+.+ .....+.+ | .. |+|||.+++
T Consensus 190 ~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 190 TSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp CEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC
T ss_pred eEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 34555 57 999999999999999997 55567777 8 44 899999999
Q ss_pred ceeEEecC-------------CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEE
Q 001070 197 APLIILKP-------------HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTL 263 (1165)
Q Consensus 197 ~pl~~lep-------------hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTL 263 (1165)
.++..+.. |+ ..|++++| .|++ .+|+ +|+.|++|+|||+.. ++|+.++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--~~~~---~~l~-~~~~dg~i~iwd~~~------------~~~~~~~ 329 (397)
T 1sq9_A 269 ERIGSLSVPTHSSQASLGEFAHS-SWVMSLSF--NDSG---ETLC-SAGWDGKLRFWDVKT------------KERITTL 329 (397)
T ss_dssp CEEEEECBC--------CCBSBS-SCEEEEEE--CSSS---SEEE-EEETTSEEEEEETTT------------TEEEEEE
T ss_pred cccceeccCcccccccccccccC-CcEEEEEE--CCCC---CEEE-EEeCCCeEEEEEcCC------------CceeEEE
Confidence 99999998 74 59999999 3544 5455 577999999999843 4899999
Q ss_pred eccCCC--------CC-----ccccccEEEEEeecCC----------cEEEEeccCCCcEEEEEeecC
Q 001070 264 DLKSSA--------KP-----RVEEAFFNQVVVLSQA----------GLLLFANAKKNAIYSVHLGYG 308 (1165)
Q Consensus 264 e~~~s~--------~~-----~~~~aff~sV~~~p~a----------~~ilLan~~r~aIYalhl~~g 308 (1165)
...... .. +.|...+..++++|++ .+|+.+. .-..|++..+.-|
T Consensus 330 ~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~-~dg~i~iw~~~~g 396 (397)
T 1sq9_A 330 NMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVC-LDRSIRWFREAGG 396 (397)
T ss_dssp ECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEE-TTTEEEEEEEEC-
T ss_pred ecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEec-CCCcEEEEEcCCC
Confidence 832110 00 1127788999999998 4555554 4466777666543
No 103
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.94 E-value=5.1e-09 Score=108.10 Aligned_cols=116 Identities=15% Similarity=0.161 Sum_probs=87.4
Q ss_pred ecCceEEEeecCCcEEEEeCcchh-----hHhhcCCcc-------------------------EEEeecCCCceeEEecC
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNTAT-----RSLLRGHTK-------------------------IKIWEDSKVAPLIILKP 204 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t~i-----r~llrGH~q-------------------------VriWD~~~g~pl~~lep 204 (1165)
.+|+||++|..||.|||||+.+.. .....+|.. |||||.+.+........
T Consensus 160 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~ 239 (318)
T 4ggc_A 160 PDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA 239 (318)
T ss_dssp TTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEEC
T ss_pred CCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccc
Confidence 368999999999999999998621 112223322 99999998876666543
Q ss_pred CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEee
Q 001070 205 HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVL 284 (1165)
Q Consensus 205 hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~ 284 (1165)
...|..++|. |++.. +++++|+.|++|+|||+.. ++|+++|.+ |.+.+..|+++
T Consensus 240 --~~~v~~~~~~--~~~~~--~~~~sg~~d~~i~iwd~~~------------~~~~~~l~g--------H~~~V~~l~~s 293 (318)
T 4ggc_A 240 --HSQVCSILWS--PHYKE--LISGHGFAQNQLVIWKYPT------------MAKVAELKG--------HTSRVLSLTMS 293 (318)
T ss_dssp --SSCEEEEEEE--TTTTE--EEEEECTTTCCEEEEETTT------------CCEEEEECC--------CSSCEEEEEEC
T ss_pred --eeeeeeeeec--ccccc--eEEEEEcCCCEEEEEECCC------------CcEEEEEcC--------CCCCEEEEEEc
Confidence 3579999994 55433 3455688999999999844 489999984 78889999999
Q ss_pred cCCcEEEEeccC
Q 001070 285 SQAGLLLFANAK 296 (1165)
Q Consensus 285 p~a~~ilLan~~ 296 (1165)
|++.+|+-+...
T Consensus 294 pdg~~l~S~s~D 305 (318)
T 4ggc_A 294 PDGATVASAAAD 305 (318)
T ss_dssp TTSSCEEEEETT
T ss_pred CCCCEEEEEecC
Confidence 999988766544
No 104
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.93 E-value=7e-09 Score=117.16 Aligned_cols=157 Identities=15% Similarity=0.230 Sum_probs=113.5
Q ss_pred cCceEEEeecCCcEEEEeCcc---------hhhHhhcCCcc--------------------------EEEeecCCCceeE
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT---------ATRSLLRGHTK--------------------------IKIWEDSKVAPLI 200 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t---------~ir~llrGH~q--------------------------VriWD~~~g~pl~ 200 (1165)
||+||++|..||.|||||+.+ .....+.+|.. |++|| .+.++.
T Consensus 77 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~ 154 (615)
T 1pgu_A 77 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLG 154 (615)
T ss_dssp TCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEE
T ss_pred CCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcce
Confidence 789999999999999999963 44456666654 77887 567899
Q ss_pred EecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccc---c
Q 001070 201 ILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEA---F 277 (1165)
Q Consensus 201 ~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~a---f 277 (1165)
.+.+|. ..|++++| .|++.. ++.+|+.|++|++||+. .++|+.+|.. |.. .
T Consensus 155 ~~~~~~-~~v~~~~~--~~~~~~---~l~~~~~d~~v~vwd~~------------~~~~~~~~~~--------~~~~~~~ 208 (615)
T 1pgu_A 155 EVSGHS-QRINACHL--KQSRPM---RSMTVGDDGSVVFYQGP------------PFKFSASDRT--------HHKQGSF 208 (615)
T ss_dssp ECCSCS-SCEEEEEE--CSSSSC---EEEEEETTTEEEEEETT------------TBEEEEEECS--------SSCTTCC
T ss_pred eeecCC-ccEEEEEE--CCCCCc---EEEEEeCCCcEEEEeCC------------Ccceeeeecc--------cCCCCce
Confidence 999885 48999999 466543 55578899999999973 3489999884 455 7
Q ss_pred EEEEEeecC-CcEEEEeccCCCcEEEEEeecCCCcccccccccccc-----ccccceeeeeeccCC------CCcceEEE
Q 001070 278 FNQVVVLSQ-AGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEF-----TVTMPVLSFTGTIDP------PSEHIIKL 345 (1165)
Q Consensus 278 f~sV~~~p~-a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF-----~v~~PILSft~~~d~------~ge~~vq~ 345 (1165)
+..++++|+ +.+|+.+... ..||...+..+. .+..| .-..+|.++... ++ ...+.|++
T Consensus 209 v~~~~~~~~~~~~l~~~~~d-g~i~vwd~~~~~--------~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~ 278 (615)
T 1pgu_A 209 VRDVEFSPDSGEFVITVGSD-RKISCFDGKSGE--------FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRV 278 (615)
T ss_dssp EEEEEECSTTCCEEEEEETT-CCEEEEETTTCC--------EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEE
T ss_pred EEEEEECCCCCCEEEEEeCC-CeEEEEECCCCC--------EeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEE
Confidence 889999999 8888777654 567777765332 22333 344566666555 44 23456777
Q ss_pred EEeeh
Q 001070 346 YCVQT 350 (1165)
Q Consensus 346 yCvQt 350 (1165)
|-+.+
T Consensus 279 wd~~~ 283 (615)
T 1pgu_A 279 WDVTT 283 (615)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 77654
No 105
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.93 E-value=1.6e-09 Score=133.98 Aligned_cols=116 Identities=10% Similarity=0.147 Sum_probs=82.9
Q ss_pred eeecCceEEEeecCCcEEEEeCcchh----------------------------------------------hHhhcCCc
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNTAT----------------------------------------------RSLLRGHT 186 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t~i----------------------------------------------r~llrGH~ 186 (1165)
++-||+|||+|..||+|||||+.+.. ..+|+||.
T Consensus 496 fspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~ 575 (902)
T 2oaj_A 496 FAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANK 575 (902)
T ss_dssp EETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCS
T ss_pred ecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCC
Confidence 44479999999999999999998731 34688898
Q ss_pred c---------------------EEEeecCCCceeE-----Eec-CCCCCCcceeEeec---CCCCCCceEEEeecCCCce
Q 001070 187 K---------------------IKIWEDSKVAPLI-----ILK-PHGGQPVNSAQYLT---APNQAGHIILVTAGPLNRE 236 (1165)
Q Consensus 187 q---------------------VriWD~~~g~pl~-----~le-phdG~sV~SVaFl~---aP~~~d~~~lvtsGslnrt 236 (1165)
. |||||++++..+. .|. +|. ..|+||+|.- .|||++++.|+ +|+.|++
T Consensus 576 ~~V~svafSpdG~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~-~~V~sv~Fs~~~~~~Dg~~~~~l~-sgs~D~t 653 (902)
T 2oaj_A 576 GKTSAINNSNIGFVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQS-ACVTCIEFVIMEYGDDGYSSILMV-CGTDMGE 653 (902)
T ss_dssp CSEEEEEECBTSEEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCC-CCEEEEEEEEEECTTSSSEEEEEE-EEETTSE
T ss_pred CcEEEEEecCCcEEEEEeCCCcEEEEECCCCeEEEEeehhHhccccc-cceEEEEEEEEecCCCCCcceEEE-EEecCCc
Confidence 7 9999998765443 332 553 3899999931 27777778555 6999999
Q ss_pred EEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEE
Q 001070 237 VKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVV 282 (1165)
Q Consensus 237 IKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~ 282 (1165)
|++|++... ..++|+.+|.++.... |++-+.+++
T Consensus 654 v~~wd~~p~---------~~g~~~~~~~~~~~~~---~~~~v~~i~ 687 (902)
T 2oaj_A 654 VITYKILPA---------SGGKFDVQLMDITNVT---SKGPIHKID 687 (902)
T ss_dssp EEEEEEEEC---------GGGCEEEEEEEEEECC---SSCCCCEEE
T ss_pred EEEEEEecC---------CCCcEEEEecCceecC---CCCceEEEE
Confidence 999998221 2347999998754321 234444554
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.92 E-value=5.3e-09 Score=115.85 Aligned_cols=126 Identities=19% Similarity=0.326 Sum_probs=95.5
Q ss_pred EeeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc--------------------EEEeecCCCceeEEecCCCCCCc
Q 001070 152 QIAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK--------------------IKIWEDSKVAPLIILKPHGGQPV 210 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q--------------------VriWD~~~g~pl~~lephdG~sV 210 (1165)
-++.||+||++|..||.|||||+.+ .....|.||.. |+|||..+|.++.++..|. ..|
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v 216 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHC-EAV 216 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCC-SCE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCC-CcE
Confidence 3566899999999999999999998 67778999987 9999999999999999885 589
Q ss_pred ceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEE
Q 001070 211 NSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLL 290 (1165)
Q Consensus 211 ~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~i 290 (1165)
.+++|. ++ ++.+|+.|++|++||+..+.. ..+..++. +|...+..+.. ++++|
T Consensus 217 ~~l~~~-----~~---~l~s~s~dg~i~vwd~~~~~~---------~~~~~~~~--------~~~~~v~~~~~--~~~~l 269 (435)
T 1p22_A 217 LHLRFN-----NG---MMVTCSKDRSIAVWDMASPTD---------ITLRRVLV--------GHRAAVNVVDF--DDKYI 269 (435)
T ss_dssp EEEECC-----TT---EEEEEETTSCEEEEECSSSSC---------CEEEEEEC--------CCSSCEEEEEE--ETTEE
T ss_pred EEEEEc-----CC---EEEEeeCCCcEEEEeCCCCCC---------ceeeeEec--------CCCCcEEEEEe--CCCEE
Confidence 999993 22 344688999999999866522 23445555 35566666655 66777
Q ss_pred EEeccCCCcEEEEEee
Q 001070 291 LFANAKKNAIYSVHLG 306 (1165)
Q Consensus 291 lLan~~r~aIYalhl~ 306 (1165)
+.+... ..|+...+.
T Consensus 270 ~s~~~d-g~i~vwd~~ 284 (435)
T 1p22_A 270 VSASGD-RTIKVWNTS 284 (435)
T ss_dssp EEEETT-SEEEEEETT
T ss_pred EEEeCC-CeEEEEECC
Confidence 766553 456665554
No 107
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.92 E-value=1.4e-08 Score=104.26 Aligned_cols=161 Identities=12% Similarity=0.182 Sum_probs=113.6
Q ss_pred cEeeecCceEEEeecCCcEEEEeCcchhhHhhcCCcc-----------------------EEEeecCCCceeEEecCCCC
Q 001070 151 RQIAVNKHYVCYGLKGGNVRVLNLNTATRSLLRGHTK-----------------------IKIWEDSKVAPLIILKPHGG 207 (1165)
Q Consensus 151 R~IAVn~~yIayG~kdg~IRVwdi~t~ir~llrGH~q-----------------------VriWD~~~g~pl~~lephdG 207 (1165)
..++.++++|++|..||.|+||| .......+++|.. |+||| .+.++..++.+..
T Consensus 108 ~~~~~~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~ 184 (313)
T 3odt_A 108 CSLSFQDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHN 184 (313)
T ss_dssp EEEEEETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCS
T ss_pred EEEEecCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCc
Confidence 45777999999999999999999 3344456677776 99999 4567888888445
Q ss_pred CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCC
Q 001070 208 QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQA 287 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a 287 (1165)
..|.+++|. |+ +. ++ +|+.|++|++||+.. ++|+.++.. |...+..++++|++
T Consensus 185 ~~i~~~~~~--~~---~~-~~-~~~~dg~i~i~d~~~------------~~~~~~~~~--------~~~~i~~~~~~~~~ 237 (313)
T 3odt_A 185 DVVRHLAVV--DD---GH-FI-SCSNDGLIKLVDMHT------------GDVLRTYEG--------HESFVYCIKLLPNG 237 (313)
T ss_dssp SCEEEEEEE--ET---TE-EE-EEETTSEEEEEETTT------------CCEEEEEEC--------CSSCEEEEEECTTS
T ss_pred ccEEEEEEc--CC---Ce-EE-EccCCCeEEEEECCc------------hhhhhhhhc--------CCceEEEEEEecCC
Confidence 699999995 44 34 44 578999999999844 489999984 66778899999999
Q ss_pred cEEEEeccCCCcEEEEEeecCCCccccccccccccccc-cceeeeeeccCC-----CCcceEEEEEeehh
Q 001070 288 GLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVT-MPVLSFTGTIDP-----PSEHIIKLYCVQTQ 351 (1165)
Q Consensus 288 ~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~-~PILSft~~~d~-----~ge~~vq~yCvQtq 351 (1165)
. |++-.....||...+..+. .+..|... .+|.++....+. ...+.|++|-+.+.
T Consensus 238 ~--l~~~~~dg~v~iwd~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 238 D--IVSCGEDRTVRIWSKENGS--------LKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp C--EEEEETTSEEEEECTTTCC--------EEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGG
T ss_pred C--EEEEecCCEEEEEECCCCc--------eeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCC
Confidence 4 4444556778887765432 12223222 256665554444 23456888877654
No 108
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.92 E-value=1.1e-08 Score=111.53 Aligned_cols=143 Identities=10% Similarity=0.239 Sum_probs=94.9
Q ss_pred eeecCceEEE--eecCCcEEEEeCcchh-----------------hHhhcCCcc-----------------------EEE
Q 001070 153 IAVNKHYVCY--GLKGGNVRVLNLNTAT-----------------RSLLRGHTK-----------------------IKI 190 (1165)
Q Consensus 153 IAVn~~yIay--G~kdg~IRVwdi~t~i-----------------r~llrGH~q-----------------------Vri 190 (1165)
.++...||++ |..||.|||||+.+.. ...|+||+. |||
T Consensus 143 ~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~i 222 (355)
T 3vu4_A 143 CEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRV 222 (355)
T ss_dssp EEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEE
T ss_pred EEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEE
Confidence 3444478888 7999999999999732 457899987 999
Q ss_pred eecCCCceeEEec-C-CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCC--------CCCCCCC-CCcce
Q 001070 191 WEDSKVAPLIILK-P-HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEG--------WSLPTHA-ESWKC 259 (1165)
Q Consensus 191 WD~~~g~pl~~le-p-hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~--------~~~~~~~-~~w~C 259 (1165)
||.++|.++..|+ + | ...|++++| +|++ .+|+ +|+.|++|+|||+..+.. +++|... ..|.
T Consensus 223 wd~~~~~~~~~~~~g~h-~~~v~~~~~--s~~~---~~l~-s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~- 294 (355)
T 3vu4_A 223 FKTEDGVLVREFRRGLD-RADVVDMKW--STDG---SKLA-VVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWS- 294 (355)
T ss_dssp EETTTCCEEEEEECTTC-CSCEEEEEE--CTTS---CEEE-EEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSC-
T ss_pred EECCCCcEEEEEEcCCC-CCcEEEEEE--CCCC---CEEE-EEECCCEEEEEEccCCCCcccccccceeeccccccccc-
Confidence 9999999999998 5 6 459999999 4554 5455 588999999999966521 0111111 1232
Q ss_pred EEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeecCC
Q 001070 260 TQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGN 309 (1165)
Q Consensus 260 ~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~g~ 309 (1165)
...+.+..... ... ..++..+++++|++.... ..+|...+..+.
T Consensus 295 ~~~~~~~~~~~---~~~--~~~a~~~d~~~l~~~~~d-g~~~~~~~~~~~ 338 (355)
T 3vu4_A 295 LCNFKLSVDKH---VRG--CKIAWISESSLVVVWPHT-RMIETFKVVFDD 338 (355)
T ss_dssp SEEEECCCCTT---CCC--CEEEESSSSEEEEEETTT-TEEEEEEEEEET
T ss_pred eeEEEeccCCC---CCc--eEEEEeCCCCEEEEEeCC-CeEEEEEEEcCC
Confidence 12233322111 111 357889999999998764 455555555433
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.91 E-value=1.2e-08 Score=112.96 Aligned_cols=167 Identities=17% Similarity=0.268 Sum_probs=112.8
Q ss_pred EeeecCceEEEeecCCcEEEEeCcc-hh---hHhhcCCcc--------------------EEEeecCCCceeEEecCCCC
Q 001070 152 QIAVNKHYVCYGLKGGNVRVLNLNT-AT---RSLLRGHTK--------------------IKIWEDSKVAPLIILKPHGG 207 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg~IRVwdi~t-~i---r~llrGH~q--------------------VriWD~~~g~pl~~lephdG 207 (1165)
.++.++.+|++|..||.|+|||+.+ .. +..+.||.. |+|||.+++.++..+.+|.
T Consensus 218 ~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~- 296 (435)
T 1p22_A 218 HLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK- 296 (435)
T ss_dssp EEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCS-
T ss_pred EEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCC-
Confidence 4666888999999999999999987 22 267888876 9999999999999999885
Q ss_pred CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCC
Q 001070 208 QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQA 287 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a 287 (1165)
..|++++|- + . ++.+|+.|++|+|||+.. ++|+.++.. |...+..+.+ ++
T Consensus 297 ~~v~~~~~~-----~--~-~l~~g~~dg~i~iwd~~~------------~~~~~~~~~--------h~~~v~~~~~--~~ 346 (435)
T 1p22_A 297 RGIACLQYR-----D--R-LVVSGSSDNTIRLWDIEC------------GACLRVLEG--------HEELVRCIRF--DN 346 (435)
T ss_dssp SCEEEEEEE-----T--T-EEEEEETTSCEEEEETTT------------CCEEEEECC--------CSSCEEEEEC--CS
T ss_pred CcEEEEEeC-----C--C-EEEEEeCCCeEEEEECCC------------CCEEEEEeC--------CcCcEEEEEe--cC
Confidence 489999992 1 3 344688999999999854 389999984 5666767766 66
Q ss_pred cEEEEeccCCCcEEEEEeecCCCccccc-ccccccc-ccccceeeeeeccCC------CCcceEEEEEeehhh
Q 001070 288 GLLLFANAKKNAIYSVHLGYGNNSAATR-IDYIAEF-TVTMPVLSFTGTIDP------PSEHIIKLYCVQTQA 352 (1165)
Q Consensus 288 ~~ilLan~~r~aIYalhl~~g~~~~~~r-~dyiaeF-~v~~PILSft~~~d~------~ge~~vq~yCvQtqA 352 (1165)
.+|+.+. ....|++..+..+..+.... ...+..| .-..+|.++.- |+ ...+.|++|-+.+..
T Consensus 347 ~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 347 KRIVSGA-YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp SEEEEEE-TTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred CEEEEEe-CCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 7766665 45678888887655332110 0011111 12234555544 22 235678999887643
No 110
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.90 E-value=1.8e-08 Score=109.82 Aligned_cols=125 Identities=10% Similarity=0.095 Sum_probs=98.1
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhH-----hhcCCcc----------------------EEEeecCCCceeEEecCCCC
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRS-----LLRGHTK----------------------IKIWEDSKVAPLIILKPHGG 207 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~-----llrGH~q----------------------VriWD~~~g~pl~~lephdG 207 (1165)
+++++++|..+|.|+|||+.+ .... .+.||.. |++||..++.++.++..| +
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~-~ 211 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLT-G 211 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECS-S
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCC-C
Confidence 578888999999999999997 3333 5667766 999999999999999877 5
Q ss_pred CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCC
Q 001070 208 QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQA 287 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a 287 (1165)
..|.+++|. |++ .++++++..|++|++||+..+ +|+.++.. ..-+..++++|++
T Consensus 212 ~~~~~~~~~--~~~---~~l~~~~~~~~~i~~~d~~~~------------~~~~~~~~---------~~~~~~~~~~~~g 265 (433)
T 3bws_A 212 KWSKILLYD--PIR---DLVYCSNWISEDISVIDRKTK------------LEIRKTDK---------IGLPRGLLLSKDG 265 (433)
T ss_dssp SSEEEEEEE--TTT---TEEEEEETTTTEEEEEETTTT------------EEEEECCC---------CSEEEEEEECTTS
T ss_pred CCeeEEEEc--CCC---CEEEEEecCCCcEEEEECCCC------------cEEEEecC---------CCCceEEEEcCCC
Confidence 689999994 554 447677888999999998543 78887774 1236788999999
Q ss_pred cEEEEeccC-------CCcEEEEEeec
Q 001070 288 GLLLFANAK-------KNAIYSVHLGY 307 (1165)
Q Consensus 288 ~~ilLan~~-------r~aIYalhl~~ 307 (1165)
++|++++.. ...||.+.+..
T Consensus 266 ~~l~~~~~~~~~~~~~dg~i~~~d~~~ 292 (433)
T 3bws_A 266 KELYIAQFSASNQESGGGRLGIYSMDK 292 (433)
T ss_dssp SEEEEEEEESCTTCSCCEEEEEEETTT
T ss_pred CEEEEEECCCCccccCCCeEEEEECCC
Confidence 999999863 45677776653
No 111
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.89 E-value=1.9e-09 Score=118.94 Aligned_cols=57 Identities=11% Similarity=0.012 Sum_probs=43.3
Q ss_pred EEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEe
Q 001070 227 LVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 227 lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl 305 (1165)
++++|+.|++|+|||+..+ .|+.++.. |..-+.+|+.+|++++|..|.-. -|..+.|
T Consensus 331 ~~~sgs~Dg~V~lwd~~~~------------~~~~~~~~--------~~~~V~svafspdG~~LA~as~~--Gv~lvrL 387 (393)
T 4gq1_A 331 FATAHSQHGLIQLINTYEK------------DSNSIPIQ--------LGMPIVDFCWHQDGSHLAIATEG--SVLLTRL 387 (393)
T ss_dssp EEEEETTTTEEEEEETTCT------------TCCEEEEE--------CSSCEEEEEECTTSSEEEEEESS--EEEEEEE
T ss_pred EEEEECCCCEEEEEECCCC------------cEEEEecC--------CCCcEEEEEEcCCCCEEEEEeCC--CeEEEEE
Confidence 5678999999999998554 77777764 45668899999999998887543 4544444
No 112
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.89 E-value=5.9e-09 Score=129.86 Aligned_cols=128 Identities=14% Similarity=0.160 Sum_probs=102.2
Q ss_pred eeecCceEEEeecCCcEEEEeCcchhhHhhcCCcc---------------------EEEeecCCCceeEEecCCCCCCcc
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNTATRSLLRGHTK---------------------IKIWEDSKVAPLIILKPHGGQPVN 211 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t~ir~llrGH~q---------------------VriWD~~~g~pl~~lephdG~sV~ 211 (1165)
+.-||+||++|..||.|+|||+.+.....+.+|.. |+|||..+|.++..+.+|.| .|.
T Consensus 1011 ~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~-~v~ 1089 (1249)
T 3sfz_A 1011 FTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQG-TVL 1089 (1249)
T ss_dssp ECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSS-CCC
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCC-cEE
Confidence 34479999999999999999999844445667765 99999999999999999854 899
Q ss_pred eeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEE
Q 001070 212 SAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLL 291 (1165)
Q Consensus 212 SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~il 291 (1165)
+++| +|++ .+++ +|+.|++|++|++..+ .|+.++.+ |..-+..++++|++.+|+
T Consensus 1090 ~~~~--s~d~---~~l~-s~s~d~~v~iwd~~~~------------~~~~~l~~--------h~~~v~~~~~s~dg~~la 1143 (1249)
T 3sfz_A 1090 SCAI--SSDA---TKFS-STSADKTAKIWSFDLL------------SPLHELKG--------HNGCVRCSAFSLDGILLA 1143 (1249)
T ss_dssp CEEE--CSSS---SSCE-EECCSSCCCEECSSSS------------SCSBCCCC--------CSSCEEEEEECSSSSEEE
T ss_pred EEEE--CCCC---CEEE-EEcCCCcEEEEECCCc------------ceeeeecc--------CCCcEEEEEECCCCCEEE
Confidence 9999 4555 4355 5888999999998544 67777764 667788999999999998
Q ss_pred EeccCCCcEEEEEeecC
Q 001070 292 FANAKKNAIYSVHLGYG 308 (1165)
Q Consensus 292 Lan~~r~aIYalhl~~g 308 (1165)
.+.... .|+...+..+
T Consensus 1144 t~~~dg-~i~vwd~~~~ 1159 (1249)
T 3sfz_A 1144 TGDDNG-EIRIWNVSDG 1159 (1249)
T ss_dssp EEETTS-CCCEEESSSS
T ss_pred EEeCCC-EEEEEECCCC
Confidence 887654 4777776644
No 113
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.88 E-value=8.5e-09 Score=113.93 Aligned_cols=126 Identities=15% Similarity=0.162 Sum_probs=95.9
Q ss_pred eeecCceEEEeecCCcEEEEeCcchh-----hHhhcCCcc-------------------------EEEeecCCCceeEEe
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNTAT-----RSLLRGHTK-------------------------IKIWEDSKVAPLIIL 202 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t~i-----r~llrGH~q-------------------------VriWD~~~g~pl~~l 202 (1165)
+..+|+||++|..||.|+|||..+.. ...+.+|.. |||||.++|.++..+
T Consensus 238 ~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~ 317 (420)
T 4gga_A 238 WAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV 317 (420)
T ss_dssp ECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEE
T ss_pred ecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceee
Confidence 33478999999999999999998621 123444543 999999999999988
Q ss_pred cCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEE
Q 001070 203 KPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVV 282 (1165)
Q Consensus 203 ephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~ 282 (1165)
..| ..|.+++|. |++.. +++++|..|++|+|||+. .++|+.+|.+ |...++.|+
T Consensus 318 ~~~--~~v~~~~~~--~~~~~--lv~~sg~~d~~I~iwd~~------------~~~~v~~l~g--------H~~~V~~l~ 371 (420)
T 4gga_A 318 DAH--SQVCSILWS--PHYKE--LISGHGFAQNQLVIWKYP------------TMAKVAELKG--------HTSRVLSLT 371 (420)
T ss_dssp ECS--SCEEEEEEE--TTTTE--EEEEECTTTCCEEEEETT------------TCCEEEEECC--------CSSCEEEEE
T ss_pred ccc--cceeeeeec--CCCCe--EEEEEecCCCEEEEEECC------------CCcEEEEEcC--------CCCCEEEEE
Confidence 865 479999994 55433 244567899999999974 3489999984 778899999
Q ss_pred eecCCcEEEEeccCCCcEEEEEe
Q 001070 283 VLSQAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 283 ~~p~a~~ilLan~~r~aIYalhl 305 (1165)
++|++.+|+-+... ..|+.-.+
T Consensus 372 ~spdg~~l~S~s~D-~tvriWdv 393 (420)
T 4gga_A 372 MSPDGATVASAAAD-ETLRLWRC 393 (420)
T ss_dssp ECTTSSCEEEEETT-TEEEEECC
T ss_pred EcCCCCEEEEEecC-CeEEEEEC
Confidence 99999988776554 44555444
No 114
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.87 E-value=8.5e-09 Score=116.48 Aligned_cols=130 Identities=14% Similarity=0.247 Sum_probs=99.7
Q ss_pred EeeecCceEEEeec-CCcEEEEeCcc-hhh-HhhcCCcc----------------------EEEeecCCCceeEEecC-C
Q 001070 152 QIAVNKHYVCYGLK-GGNVRVLNLNT-ATR-SLLRGHTK----------------------IKIWEDSKVAPLIILKP-H 205 (1165)
Q Consensus 152 ~IAVn~~yIayG~k-dg~IRVwdi~t-~ir-~llrGH~q----------------------VriWD~~~g~pl~~lep-h 205 (1165)
.++++|++|++|.. ||.|+|||+.+ .+. ..+.+|.. |+|||..++.++..+.. |
T Consensus 451 ~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h 530 (615)
T 1pgu_A 451 AVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFR 530 (615)
T ss_dssp EEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCC
T ss_pred EEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCC
Confidence 45666999999999 99999999998 333 67788876 99999999999999987 6
Q ss_pred CCCCcceeEeecCCC-------CCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccE
Q 001070 206 GGQPVNSAQYLTAPN-------QAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFF 278 (1165)
Q Consensus 206 dG~sV~SVaFl~aP~-------~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff 278 (1165)
...|.+++|. |. +.++.+|+ +|+.|++|+||++..+ .+|++++.+ |..-+
T Consensus 531 -~~~v~~~~~s--p~~~~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~-----------~~~~~~~~~--------h~~~v 587 (615)
T 1pgu_A 531 -TSKINAISWK--PAEKGANEEEIEEDLVA-TGSLDTNIFIYSVKRP-----------MKIIKALNA--------HKDGV 587 (615)
T ss_dssp -SSCEEEEEEC--CCC------CCSCCEEE-EEETTSCEEEEESSCT-----------TCCEEETTS--------STTCE
T ss_pred -CCceeEEEEc--CccccccccccCCCEEE-EEcCCCcEEEEECCCC-----------ceechhhhc--------Cccce
Confidence 4599999994 51 11445455 6889999999998443 278888774 67778
Q ss_pred EEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 279 NQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 279 ~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
..++.+|++. |+.+. ....|+...+.
T Consensus 588 ~~l~~s~~~~-l~s~~-~d~~v~iw~~~ 613 (615)
T 1pgu_A 588 NNLLWETPST-LVSSG-ADACIKRWNVV 613 (615)
T ss_dssp EEEEEEETTE-EEEEE-TTSCEEEEEEC
T ss_pred EEEEEcCCCC-eEEec-CCceEEEEeee
Confidence 8999999999 55444 44556655543
No 115
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.87 E-value=1.5e-08 Score=106.23 Aligned_cols=127 Identities=10% Similarity=0.136 Sum_probs=94.1
Q ss_pred CceEEEeecCCcEEEEeCcc-hhhHhhcCCc-----c--------------------------EEEeecCCCceeEEecC
Q 001070 157 KHYVCYGLKGGNVRVLNLNT-ATRSLLRGHT-----K--------------------------IKIWEDSKVAPLIILKP 204 (1165)
Q Consensus 157 ~~yIayG~kdg~IRVwdi~t-~ir~llrGH~-----q--------------------------VriWD~~~g~pl~~lep 204 (1165)
..+++.+..+|.|+|||+.+ .....+.+|. . |+|||..++.++..+.+
T Consensus 34 ~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 113 (366)
T 3k26_A 34 DPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG 113 (366)
T ss_dssp SCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES
T ss_pred CceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC
Confidence 45566777788999999997 4434455443 1 99999999999999998
Q ss_pred CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEee
Q 001070 205 HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVL 284 (1165)
Q Consensus 205 hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~ 284 (1165)
|. ..|++++| .|+ ++.+|+ +|+.|++|+|||+..+ +|+.++.. ..+|...+..++++
T Consensus 114 ~~-~~i~~~~~--~~~--~~~~l~-s~~~dg~i~iwd~~~~------------~~~~~~~~-----~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 114 HG-NAINELKF--HPR--DPNLLL-SVSKDHALRLWNIQTD------------TLVAIFGG-----VEGHRDEVLSADYD 170 (366)
T ss_dssp CC-SCEEEEEE--CSS--CTTEEE-EEETTSCEEEEETTTT------------EEEEEECS-----TTSCSSCEEEEEEC
T ss_pred CC-CcEEEEEE--CCC--CCCEEE-EEeCCCeEEEEEeecC------------eEEEEecc-----cccccCceeEEEEC
Confidence 85 59999999 452 233344 6888999999998544 78887731 11467888899999
Q ss_pred cCCcEEEEeccCCCcEEEEEeec
Q 001070 285 SQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 285 p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
|++.+|+.+... ..|+...+..
T Consensus 171 ~~~~~l~~~~~d-g~i~i~d~~~ 192 (366)
T 3k26_A 171 LLGEKIMSCGMD-HSLKLWRINS 192 (366)
T ss_dssp TTSSEEEEEETT-SCEEEEESCS
T ss_pred CCCCEEEEecCC-CCEEEEECCC
Confidence 999988877654 5677776653
No 116
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.86 E-value=7.7e-09 Score=113.35 Aligned_cols=163 Identities=15% Similarity=0.174 Sum_probs=105.7
Q ss_pred Cceee-cC----CceEEecccCCCCCCCCCCcccccccccC-CCcccccccEeee--cCceEEEeecCCcEEEEeCc---
Q 001070 107 YGKRV-FG----DYVAYDVDAVEEGREPTQQLEVNPITKYG-SDPELLIGRQIAV--NKHYVCYGLKGGNVRVLNLN--- 175 (1165)
Q Consensus 107 ~Gr~l-~g----~~~~~dVd~~~~ge~~~pqlev~pIt~Y~-sd~~~~~GR~IAV--n~~yIayG~kdg~IRVwdi~--- 175 (1165)
+|++| .| .-.+||++....|+.. . ++..|+ ..+ -+.++. |+++|++|..||.|||||+.
T Consensus 75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~--~----~~~~~~h~~~----v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~ 144 (437)
T 3gre_A 75 ETPYLITGSDQGVIKIWNLKEIIVGEVY--S----SSLTYDCSST----VTQITMIPNFDAFAVSSKDGQIIVLKVNHYQ 144 (437)
T ss_dssp SSCEEEEEETTSEEEEEEHHHHHTTCCC--S----CSEEEECSSC----EEEEEECTTSSEEEEEETTSEEEEEEEEEEE
T ss_pred CCCEEEEecCCceEEEeECcccccCccc--c----eeeeccCCCC----EEEEEEeCCCCEEEEEeCCCEEEEEEecccc
Confidence 57777 44 3357898875544422 1 111121 111 233444 68999999999999999995
Q ss_pred c-hhhHhhcCC----------------------------------cc--EEEeecCCCceeEEecC--CCCCCcceeEee
Q 001070 176 T-ATRSLLRGH----------------------------------TK--IKIWEDSKVAPLIILKP--HGGQPVNSAQYL 216 (1165)
Q Consensus 176 t-~ir~llrGH----------------------------------~q--VriWD~~~g~pl~~lep--hdG~sV~SVaFl 216 (1165)
+ .....+++| .. |+|||.+++.++.+++. |. ..|++++|
T Consensus 145 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~-~~v~~~~~- 222 (437)
T 3gre_A 145 QESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRH-GAVSSICI- 222 (437)
T ss_dssp ETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGG-CCEEEEEE-
T ss_pred CCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCC-CceEEEEE-
Confidence 2 222222221 11 99999999999999998 54 49999999
Q ss_pred cCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeec----CCcEEEE
Q 001070 217 TAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS----QAGLLLF 292 (1165)
Q Consensus 217 ~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p----~a~~ilL 292 (1165)
.|+ +.+|+ +|+.|++|+|||+.. ++|++++.+ .|..-+..++..| ++.+|+.
T Consensus 223 -s~~---~~~l~-s~~~dg~i~iwd~~~------------~~~~~~~~~-------~~~~~v~~~~~~~~~s~~~~~l~s 278 (437)
T 3gre_A 223 -DEE---CCVLI-LGTTRGIIDIWDIRF------------NVLIRSWSF-------GDHAPITHVEVCQFYGKNSVIVVG 278 (437)
T ss_dssp -CTT---SCEEE-EEETTSCEEEEETTT------------TEEEEEEBC-------TTCEEEEEEEECTTTCTTEEEEEE
T ss_pred -CCC---CCEEE-EEcCCCeEEEEEcCC------------ccEEEEEec-------CCCCceEEEEeccccCCCccEEEE
Confidence 455 45355 688999999999854 489999986 2445566775554 4545554
Q ss_pred eccCCCcEEEEEee
Q 001070 293 ANAKKNAIYSVHLG 306 (1165)
Q Consensus 293 an~~r~aIYalhl~ 306 (1165)
+. ....|+...+.
T Consensus 279 ~~-~dg~i~iwd~~ 291 (437)
T 3gre_A 279 GS-SKTFLTIWNFV 291 (437)
T ss_dssp ES-TTEEEEEEETT
T ss_pred Ec-CCCcEEEEEcC
Confidence 44 44466666654
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.86 E-value=1.1e-08 Score=115.88 Aligned_cols=141 Identities=9% Similarity=0.031 Sum_probs=97.5
Q ss_pred CCcccccccccCCCcccccccE-------eee--c----CceEEEeecCCcEEEEeCcc--hhhHhhcCCcc-EEEeecC
Q 001070 131 QQLEVNPITKYGSDPELLIGRQ-------IAV--N----KHYVCYGLKGGNVRVLNLNT--ATRSLLRGHTK-IKIWEDS 194 (1165)
Q Consensus 131 pqlev~pIt~Y~sd~~~~~GR~-------IAV--n----~~yIayG~kdg~IRVwdi~t--~ir~llrGH~q-VriWD~~ 194 (1165)
|=++|-|+..---..--.+|++ ||. | +.++++|..+ |+||++.+ -+...+.||.+ ||+|+..
T Consensus 88 ~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~~V~~~~~s 165 (356)
T 2w18_A 88 PVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQQVEVMTFA 165 (356)
T ss_dssp CEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTCEEEEEEEC
T ss_pred eeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCCcEEEEEEC
Confidence 4566666653333333444543 443 7 8899997755 99999987 23334788999 9999995
Q ss_pred C-CceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcc
Q 001070 195 K-VAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRV 273 (1165)
Q Consensus 195 ~-g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~ 273 (1165)
. |..+..+..| +..|+.++|...+.... +|+||+.|++|||||+.++ +|+.||+.+..
T Consensus 166 ~dG~~~~s~~~~-~~~v~~l~fs~~~g~~~---~LaSgS~D~TIkIWDl~TG------------k~l~tL~g~~~----- 224 (356)
T 2w18_A 166 EDGGGKENQFLM-PPEETILTFAEVQGMQE---ALLGTTIMNNIVIWNLKTG------------QLLKKMHIDDS----- 224 (356)
T ss_dssp TTSCEEEEEEEC-CCSSCEEEEEEEETSTT---EEEEEETTSEEEEEETTTC------------CEEEEEECCC------
T ss_pred CCCceeeeeccC-CCceeeEEeeccCCCCc---eEEEecCCCcEEEEECCCC------------cEEEEEcCCCc-----
Confidence 4 8888888877 56899999942222223 5668999999999999555 99999985321
Q ss_pred ccccEEEEEeecCCcEEEEec
Q 001070 274 EEAFFNQVVVLSQAGLLLFAN 294 (1165)
Q Consensus 274 ~~aff~sV~~~p~a~~ilLan 294 (1165)
+-..+..++++|++.+++...
T Consensus 225 ~v~~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 225 YQASVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp --CCCEEEEEEETTEEEEEEC
T ss_pred ceeeeEEEEECCCCCEEEEec
Confidence 124566778999988776533
No 118
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.84 E-value=2e-08 Score=121.07 Aligned_cols=167 Identities=12% Similarity=0.145 Sum_probs=114.3
Q ss_pred cCceEEEeecCCcEEEEeCc--c-hhhHhhcCCcc------------------------EEEeecCCCc--eeEEecCCC
Q 001070 156 NKHYVCYGLKGGNVRVLNLN--T-ATRSLLRGHTK------------------------IKIWEDSKVA--PLIILKPHG 206 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~--t-~ir~llrGH~q------------------------VriWD~~~g~--pl~~lephd 206 (1165)
||+||++|..||.|+|||+. + .....|+||.. |+|||..++. ++..+.+|.
T Consensus 20 dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~ 99 (753)
T 3jro_A 20 YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS 99 (753)
T ss_dssp SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS
T ss_pred CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCC
Confidence 68999999999999999998 4 55567889976 9999999986 688888884
Q ss_pred CCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecC
Q 001070 207 GQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQ 286 (1165)
Q Consensus 207 G~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~ 286 (1165)
..|++++| .|+.. +.+++ +|+.|++|++||+..+.. .+..++. +|..-+..+..+|.
T Consensus 100 -~~V~~v~~--sp~~~-~~~l~-sgs~dg~I~vwdl~~~~~----------~~~~~~~--------~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 100 -ASVNSVQW--APHEY-GPLLL-VASSDGKVSVVEFKENGT----------TSPIIID--------AHAIGVNSASWAPA 156 (753)
T ss_dssp -SCEEEEEE--CCGGG-CSEEE-EEETTSEEEEEECCSSSC----------CCCEEEE--------CCSSCEEEEEECCC
T ss_pred -CCeEEEEE--CCCCC-CCEEE-EEeCCCcEEEEEeecCCC----------cceeEee--------cCCCceEEEEecCc
Confidence 49999999 45521 23345 588999999999865421 2333444 35667788888884
Q ss_pred -------------CcEEEEeccCCCcEEEEEeecCCCcccccccccccccc-ccceeeeeeccC---C------CCcceE
Q 001070 287 -------------AGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTV-TMPVLSFTGTID---P------PSEHII 343 (1165)
Q Consensus 287 -------------a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v-~~PILSft~~~d---~------~ge~~v 343 (1165)
+.+|+.+.. ...|+...+..+... +..+..|.- ..+|.++....+ + ...+.|
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs~-dg~I~iwd~~~~~~~----~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I 231 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSDAQT----YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 231 (753)
T ss_dssp C---------CGGGCCEEEEET-TSCEEEEEEETTTTE----EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCE
T ss_pred ccccccccccCCCCCEEEEEEC-CCeEEEEeccCCccc----ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEE
Confidence 666665554 566888887765431 112222221 345666655554 3 234568
Q ss_pred EEEEeeh
Q 001070 344 KLYCVQT 350 (1165)
Q Consensus 344 q~yCvQt 350 (1165)
++|-+.+
T Consensus 232 ~iwd~~~ 238 (753)
T 3jro_A 232 IIWTQDN 238 (753)
T ss_dssp EEEEESS
T ss_pred EEecCCC
Confidence 8887765
No 119
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.84 E-value=4.7e-08 Score=107.23 Aligned_cols=134 Identities=10% Similarity=0.150 Sum_probs=82.2
Q ss_pred EEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccC
Q 001070 188 IKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKS 267 (1165)
Q Consensus 188 VriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~ 267 (1165)
|||||..++.++..++ |. ..|++|+| +|+| ++|+ +|+.| ++++|+...+ .|+.+..+
T Consensus 159 i~iwd~~~~~~~~~~~-~~-~~V~~v~f--spdg---~~l~-s~s~~-~~~~~~~~~~------------~~~~~~~~-- 215 (365)
T 4h5i_A 159 MRIIDPSDLTEKFEIE-TR-GEVKDLHF--STDG---KVVA-YITGS-SLEVISTVTG------------SCIARKTD-- 215 (365)
T ss_dssp EEEEETTTTEEEEEEE-CS-SCCCEEEE--CTTS---SEEE-EECSS-CEEEEETTTC------------CEEEEECC--
T ss_pred EEEeECCCCcEEEEeC-CC-CceEEEEE--ccCC---ceEE-eccce-eEEEEEeccC------------cceeeeec--
Confidence 9999999999988887 43 47999999 4544 5455 46544 5666665433 45544332
Q ss_pred CCCCccccccEEEEEeecCCcEEEEeccCCC---cEEEEEeecCCCcccccccccccc-ccccceeeeeeccCC------
Q 001070 268 SAKPRVEEAFFNQVVVLSQAGLLLFANAKKN---AIYSVHLGYGNNSAATRIDYIAEF-TVTMPVLSFTGTIDP------ 337 (1165)
Q Consensus 268 s~~~~~~~aff~sV~~~p~a~~ilLan~~r~---aIYalhl~~g~~~~~~r~dyiaeF-~v~~PILSft~~~d~------ 337 (1165)
.+|...+..|+++|++.+++.+..... .|+...+..+.. .+.....+ .-..+|.++....|+
T Consensus 216 ----~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~V~~~~~Spdg~~lasg 287 (365)
T 4h5i_A 216 ----FDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT----SVLRSKQVTNRFKGITSMDVDMKGELAVLA 287 (365)
T ss_dssp ----CCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE----EEEEEEEEESSCSCEEEEEECTTSCEEEEE
T ss_pred ----CCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccccee----cceeeeeecCCCCCeEeEEECCCCCceEEE
Confidence 146778899999999999998876654 333333332111 00000111 123467676665555
Q ss_pred CCcceEEEEEeehhh
Q 001070 338 PSEHIIKLYCVQTQA 352 (1165)
Q Consensus 338 ~ge~~vq~yCvQtqA 352 (1165)
...+.|+||-+++..
T Consensus 288 s~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 288 SNDNSIALVKLKDLS 302 (365)
T ss_dssp ETTSCEEEEETTTTE
T ss_pred cCCCEEEEEECCCCc
Confidence 123568999887643
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.81 E-value=2.8e-08 Score=119.78 Aligned_cols=170 Identities=15% Similarity=0.167 Sum_probs=115.1
Q ss_pred CceEEEeecCCcEEEEeCcch---hhHhhcCCcc------------------------EEEeecCCC--ceeEEecCCCC
Q 001070 157 KHYVCYGLKGGNVRVLNLNTA---TRSLLRGHTK------------------------IKIWEDSKV--APLIILKPHGG 207 (1165)
Q Consensus 157 ~~yIayG~kdg~IRVwdi~t~---ir~llrGH~q------------------------VriWD~~~g--~pl~~lephdG 207 (1165)
|+||++|..||.|||||+.+. ....+.+|.. |+|||.+++ .....+.+|.
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~- 145 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA- 145 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCS-
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCC-
Confidence 899999999999999999983 4456777765 999999887 3466677774
Q ss_pred CCcceeEeecCCCC----------CCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcccccc
Q 001070 208 QPVNSAQYLTAPNQ----------AGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAF 277 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~----------~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~af 277 (1165)
..|++++|. |.. +++.+++ +|+.|++|+|||+..+ ...+.|..++.. |...
T Consensus 146 ~~v~~l~~~--p~~~~~~~~~~~~~d~~~l~-sgs~dg~I~iwd~~~~--------~~~~~~~~~~~~--------h~~~ 206 (753)
T 3jro_A 146 IGVNSASWA--PATIEEDGEHNGTKESRKFV-TGGADNLVKIWKYNSD--------AQTYVLESTLEG--------HSDW 206 (753)
T ss_dssp SCEEEEEEC--CCC---------CGGGCCEE-EEETTSCEEEEEEETT--------TTEEEEEEEECC--------CSSC
T ss_pred CceEEEEec--CcccccccccccCCCCCEEE-EEECCCeEEEEeccCC--------cccceeeeeecC--------CCCc
Confidence 489999994 421 1345455 5778999999998654 235788888884 6777
Q ss_pred EEEEEeecC---CcEEEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC------CCcceEEEEEe
Q 001070 278 FNQVVVLSQ---AGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP------PSEHIIKLYCV 348 (1165)
Q Consensus 278 f~sV~~~p~---a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~------~ge~~vq~yCv 348 (1165)
+..++++|+ +.+|+.+. ....|+...+..+.... ............+|.++....++ .+.+.|++|-+
T Consensus 207 V~~l~~sp~~~~~~~l~s~s-~Dg~I~iwd~~~~~~~~--~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~ 283 (753)
T 3jro_A 207 VRDVAWSPTVLLRSYLASVS-QDRTCIIWTQDNEQGPW--KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (753)
T ss_dssp EEEEEECCCCSSSEEEEEEE-SSSCEEEEEESSSSSCC--BCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred EEEEEeccCCCCCCEEEEEe-cCCEEEEecCCCCCCcc--eeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence 889999999 56655554 45678888777654321 11112222334455555544443 23445777754
Q ss_pred e
Q 001070 349 Q 349 (1165)
Q Consensus 349 Q 349 (1165)
.
T Consensus 284 ~ 284 (753)
T 3jro_A 284 N 284 (753)
T ss_dssp C
T ss_pred C
Confidence 4
No 121
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.80 E-value=1.5e-08 Score=105.98 Aligned_cols=121 Identities=19% Similarity=0.323 Sum_probs=85.9
Q ss_pred CceEEEeecCCcEEEEeCcc---hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCCcc
Q 001070 157 KHYVCYGLKGGNVRVLNLNT---ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQPVN 211 (1165)
Q Consensus 157 ~~yIayG~kdg~IRVwdi~t---~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~sV~ 211 (1165)
|+||++|..||.|||||+.+ .+...+.||.. |+|||..++..+. +..|. ..|.
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~-~~v~ 131 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHD-APVK 131 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECS-SCEE
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-ecccc-CceE
Confidence 58999999999999999986 34468899988 9999999988665 44564 5899
Q ss_pred eeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEE
Q 001070 212 SAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLL 291 (1165)
Q Consensus 212 SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~il 291 (1165)
+++|...|++ .+|+ +|+.|++|++||+..+ +|++++.++. -+..+ +....+++
T Consensus 132 ~~~~~~~~~~---~~l~-~~~~dg~i~vwd~~~~------------~~~~~~~~~~---------~~~~~--~~~~~~~~ 184 (368)
T 3mmy_A 132 TIHWIKAPNY---SCVM-TGSWDKTLKFWDTRSS------------NPMMVLQLPE---------RCYCA--DVIYPMAV 184 (368)
T ss_dssp EEEEEECSSC---EEEE-EEETTSEEEEECSSCS------------SCSEEEECSS---------CEEEE--EEETTEEE
T ss_pred EEEEEeCCCC---CEEE-EccCCCcEEEEECCCC------------cEEEEEecCC---------CceEE--EecCCeeE
Confidence 9999644444 4455 5889999999998543 7888888632 12223 33344555
Q ss_pred EeccCCCcEEEEEeec
Q 001070 292 FANAKKNAIYSVHLGY 307 (1165)
Q Consensus 292 Lan~~r~aIYalhl~~ 307 (1165)
++.. ...|+...+..
T Consensus 185 ~~~~-~~~i~~~~~~~ 199 (368)
T 3mmy_A 185 VATA-ERGLIVYQLEN 199 (368)
T ss_dssp EEEG-GGCEEEEECSS
T ss_pred EEeC-CCcEEEEEecc
Confidence 5444 34566665553
No 122
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.77 E-value=3.7e-08 Score=103.04 Aligned_cols=125 Identities=11% Similarity=0.063 Sum_probs=93.4
Q ss_pred eecCc-eEEEeecCCcEEEEeC-cchhhHhhcC--Ccc---------------------EEEeecCC---------Ccee
Q 001070 154 AVNKH-YVCYGLKGGNVRVLNL-NTATRSLLRG--HTK---------------------IKIWEDSK---------VAPL 199 (1165)
Q Consensus 154 AVn~~-yIayG~kdg~IRVwdi-~t~ir~llrG--H~q---------------------VriWD~~~---------g~pl 199 (1165)
.-||+ +|++|..||.|+|||+ .+.....+.+ |.. |+|||.++ +.++
T Consensus 65 ~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 144 (342)
T 1yfq_A 65 IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS 144 (342)
T ss_dssp EESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCS
T ss_pred CCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCee
Confidence 33799 9999999999999999 8755567788 876 99999998 8888
Q ss_pred EEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccC-cCCCCCCCCCCCcce-EEEEeccCCCCCcccccc
Q 001070 200 IILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASAS-EEGWSLPTHAESWKC-TQTLDLKSSAKPRVEEAF 277 (1165)
Q Consensus 200 ~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~-~~~~~~~~~~~~w~C-~QTLe~~~s~~~~~~~af 277 (1165)
.++. |. ..|++++|. |++ ++ +|+.|++|++||+.. . .+ ...... .++..
T Consensus 145 ~~~~-~~-~~v~~~~~~--~~~-----l~-~~~~d~~i~i~d~~~~~------------~~~~~~~~~-------~~~~~ 195 (342)
T 1yfq_A 145 NNTK-VK-NKIFTMDTN--SSR-----LI-VGMNNSQVQWFRLPLCE------------DDNGTIEES-------GLKYQ 195 (342)
T ss_dssp SSSS-SC-CCEEEEEEC--SSE-----EE-EEESTTEEEEEESSCCT------------TCCCEEEEC-------SCSSC
T ss_pred eEEe-eC-CceEEEEec--CCc-----EE-EEeCCCeEEEEECCccc------------cccceeeec-------CCCCc
Confidence 8887 53 589999994 333 44 478899999999865 3 22 122221 24566
Q ss_pred EEEEEeec-CCcEEEEeccCCCcEEEEEeecC
Q 001070 278 FNQVVVLS-QAGLLLFANAKKNAIYSVHLGYG 308 (1165)
Q Consensus 278 f~sV~~~p-~a~~ilLan~~r~aIYalhl~~g 308 (1165)
+..++++| ++.+|+.+.. ...|+...+..+
T Consensus 196 i~~i~~~~~~~~~l~~~~~-dg~i~i~~~~~~ 226 (342)
T 1yfq_A 196 IRDVALLPKEQEGYACSSI-DGRVAVEFFDDQ 226 (342)
T ss_dssp EEEEEECSGGGCEEEEEET-TSEEEEEECCTT
T ss_pred eeEEEECCCCCCEEEEEec-CCcEEEEEEcCC
Confidence 78999999 9998888776 456777666554
No 123
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.76 E-value=4.2e-08 Score=115.78 Aligned_cols=128 Identities=18% Similarity=0.315 Sum_probs=101.6
Q ss_pred ecCceEEEeecCCcEEEEeCcc--hhhHhhcCCcc-----------------------EEEeecCCCceeEEecCCCCCC
Q 001070 155 VNKHYVCYGLKGGNVRVLNLNT--ATRSLLRGHTK-----------------------IKIWEDSKVAPLIILKPHGGQP 209 (1165)
Q Consensus 155 Vn~~yIayG~kdg~IRVwdi~t--~ir~llrGH~q-----------------------VriWD~~~g~pl~~lephdG~s 209 (1165)
-||++|++|..||.|+|||+.+ .....+.||.. |+|||..++.+..++..+.+..
T Consensus 107 ~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~ 186 (814)
T 3mkq_A 107 PTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERG 186 (814)
T ss_dssp SSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCC
Confidence 3689999999999999999997 45568888886 9999999998888888877679
Q ss_pred cceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcE
Q 001070 210 VNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGL 289 (1165)
Q Consensus 210 V~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ 289 (1165)
|.+++|...|++ .+|+ +|+.|++|++||+.. +.|++++.. |..-+..++++|++.+
T Consensus 187 v~~~~~~~~~~~---~~l~-~~~~dg~i~~~d~~~------------~~~~~~~~~--------~~~~v~~~~~~~~~~~ 242 (814)
T 3mkq_A 187 VNYVDYYPLPDK---PYMI-TASDDLTIKIWDYQT------------KSCVATLEG--------HMSNVSFAVFHPTLPI 242 (814)
T ss_dssp CCEEEECCSTTC---CEEE-EECTTSEEEEEETTT------------TEEEEEEEC--------CSSCEEEEEECSSSSE
T ss_pred EEEEEEEECCCC---CEEE-EEeCCCEEEEEECCC------------CcEEEEEcC--------CCCCEEEEEEcCCCCE
Confidence 999999522243 4355 577899999999844 489999984 5666789999999998
Q ss_pred EEEeccCCCcEEEEEeec
Q 001070 290 LLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 290 ilLan~~r~aIYalhl~~ 307 (1165)
|+.+... ..|+...+..
T Consensus 243 l~~~~~d-g~v~vwd~~~ 259 (814)
T 3mkq_A 243 IISGSED-GTLKIWNSST 259 (814)
T ss_dssp EEEEETT-SCEEEEETTT
T ss_pred EEEEeCC-CeEEEEECCC
Confidence 7777653 5677766543
No 124
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.76 E-value=3.1e-08 Score=112.40 Aligned_cols=132 Identities=12% Similarity=0.102 Sum_probs=92.2
Q ss_pred cCceEE----EeecCCcEEEEeCcch------h------hHhhcCCcc-----------------------EEEeecCCC
Q 001070 156 NKHYVC----YGLKGGNVRVLNLNTA------T------RSLLRGHTK-----------------------IKIWEDSKV 196 (1165)
Q Consensus 156 n~~yIa----yG~kdg~IRVwdi~t~------i------r~llrGH~q-----------------------VriWD~~~g 196 (1165)
||+||+ +|..||.|||||+.+. . ..+++||.. |||||.+++
T Consensus 103 dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~ 182 (434)
T 2oit_A 103 DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET 182 (434)
T ss_dssp TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS
T ss_pred CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC
Confidence 589999 8999999999999864 1 246788877 999999998
Q ss_pred ceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccc
Q 001070 197 APLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEA 276 (1165)
Q Consensus 197 ~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~a 276 (1165)
..+....+| +..|++++| +|+| .+|+ +|+.|++|++||.. + .+..++..+...+. .|..
T Consensus 183 ~~~~~~~~~-~~~v~~v~w--spdg---~~la-sgs~dg~v~iwd~~-~------------~~~~~~~~~~~~~~-~~~~ 241 (434)
T 2oit_A 183 VKVCATLPS-TVAVTSVCW--SPKG---KQLA-VGKQNGTVVQYLPT-L------------QEKKVIPCPPFYES-DHPV 241 (434)
T ss_dssp EEEEEEECG-GGCEEEEEE--CTTS---SCEE-EEETTSCEEEECTT-C------------CEEEEECCCTTCCT-TSCE
T ss_pred cceeeccCC-CCceeEEEE--cCCC---CEEE-EEcCCCcEEEEccC-C------------cccccccCCcccCC-CCce
Confidence 777667766 458999999 5664 4466 57799999999974 2 45666665332211 1334
Q ss_pred cEEEEEeecCCcEEEEeccC------CCcEEEEEeecC
Q 001070 277 FFNQVVVLSQAGLLLFANAK------KNAIYSVHLGYG 308 (1165)
Q Consensus 277 ff~sV~~~p~a~~ilLan~~------r~aIYalhl~~g 308 (1165)
.+.++..+++..|++..... ...+|...+...
T Consensus 242 ~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 242 RVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred eEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 66677788877776554422 244666666543
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.70 E-value=6.6e-08 Score=105.31 Aligned_cols=126 Identities=13% Similarity=0.080 Sum_probs=99.3
Q ss_pred eee--cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc-----------------------EEEeecCCCceeEEecCCC
Q 001070 153 IAV--NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK-----------------------IKIWEDSKVAPLIILKPHG 206 (1165)
Q Consensus 153 IAV--n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q-----------------------VriWD~~~g~pl~~lephd 206 (1165)
+++ +|+++++|..||.|+|||+.+ .....+.+|.. |++||.+++..+..+..+
T Consensus 175 ~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~- 253 (433)
T 3bws_A 175 ISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI- 253 (433)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-
T ss_pred EEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-
Confidence 455 789999999999999999998 55566777765 999999999888888764
Q ss_pred CCCcceeEeecCCCCCCceEEEeecC-------CCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEE
Q 001070 207 GQPVNSAQYLTAPNQAGHIILVTAGP-------LNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFN 279 (1165)
Q Consensus 207 G~sV~SVaFl~aP~~~d~~~lvtsGs-------lnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~ 279 (1165)
..+.+++| .|++ .+|++++. .|++|++||+..+ +++.++.. .....
T Consensus 254 -~~~~~~~~--~~~g---~~l~~~~~~~~~~~~~dg~i~~~d~~~~------------~~~~~~~~---------~~~~~ 306 (433)
T 3bws_A 254 -GLPRGLLL--SKDG---KELYIAQFSASNQESGGGRLGIYSMDKE------------KLIDTIGP---------PGNKR 306 (433)
T ss_dssp -SEEEEEEE--CTTS---SEEEEEEEESCTTCSCCEEEEEEETTTT------------EEEEEEEE---------EECEE
T ss_pred -CCceEEEE--cCCC---CEEEEEECCCCccccCCCeEEEEECCCC------------cEEeeccC---------CCCcc
Confidence 35999999 4554 44665443 5889999998544 67777652 34566
Q ss_pred EEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 280 QVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 280 sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
.++++|++++|++++...+.||.+.+.
T Consensus 307 ~~~~~~~g~~l~~~~~~~~~v~v~d~~ 333 (433)
T 3bws_A 307 HIVSGNTENKIYVSDMCCSKIEVYDLK 333 (433)
T ss_dssp EEEECSSTTEEEEEETTTTEEEEEETT
T ss_pred eEEECCCCCEEEEEecCCCEEEEEECC
Confidence 889999999999999889999998876
No 126
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.70 E-value=5.2e-08 Score=116.42 Aligned_cols=121 Identities=10% Similarity=0.102 Sum_probs=88.9
Q ss_pred eeecCceEEEeecCCcEEEEeCcch-h-------hHhh----cCCcc--------------------EEEeecCCCc---
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNTA-T-------RSLL----RGHTK--------------------IKIWEDSKVA--- 197 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t~-i-------r~ll----rGH~q--------------------VriWD~~~g~--- 197 (1165)
++.||+|||+|..||+|||||+.+. + -..| .||.. ||+||..++.
T Consensus 137 fSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~ 216 (588)
T 2j04_A 137 WNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQP 216 (588)
T ss_dssp ECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCC
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCcccc
Confidence 3468999999999999999999984 2 1345 66666 9999998876
Q ss_pred eeEEec-CCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccc
Q 001070 198 PLIILK-PHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEA 276 (1165)
Q Consensus 198 pl~~le-phdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~a 276 (1165)
.+++++ +|. ..|.+|+|. + ..|++++ +++||||++.++ ...++.+ +|.+
T Consensus 217 ~~~tL~~~h~-~~V~svaFs------g-~~LASa~--~~tIkLWd~~~~-------------~~~~~~~-------gh~~ 266 (588)
T 2j04_A 217 VSRMIQNASR-RKITDLKIV------D-YKVVLTC--PGYVHKIDLKNY-------------SISSLKT-------GSLE 266 (588)
T ss_dssp CEEEEECCCS-SCCCCEEEE------T-TEEEEEC--SSEEEEEETTTT-------------EEEEEEC-------SCCS
T ss_pred ceeeeccccc-CcEEEEEEE------C-CEEEEEe--CCeEEEEECCCC-------------eEEEEEc-------CCCc
Confidence 346775 553 589999995 2 3356544 689999998554 2334443 4678
Q ss_pred cEEEEEe--ecCCcEEEEeccCCCcEEEE
Q 001070 277 FFNQVVV--LSQAGLLLFANAKKNAIYSV 303 (1165)
Q Consensus 277 ff~sV~~--~p~a~~ilLan~~r~aIYal 303 (1165)
.+..|++ .|++..|++|+-..--||-+
T Consensus 267 ~V~~va~~~s~d~~~La~a~edG~klw~~ 295 (588)
T 2j04_A 267 NFHIIPLNHEKESTILLMSNKTSYKVLLE 295 (588)
T ss_dssp CCCEEEETTCSSCEEEEECSSCEEEEEES
T ss_pred eEEEEEeeeCCCCCEEEEEcCCCCEEEee
Confidence 8889999 99999999998554344443
No 127
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.67 E-value=1e-06 Score=91.61 Aligned_cols=180 Identities=17% Similarity=0.223 Sum_probs=114.7
Q ss_pred cEeee--cCceEEEee-cCCcEEEEeC---cc-hhhHhhcCCcc----------------------EEEeecCC-Ccee-
Q 001070 151 RQIAV--NKHYVCYGL-KGGNVRVLNL---NT-ATRSLLRGHTK----------------------IKIWEDSK-VAPL- 199 (1165)
Q Consensus 151 R~IAV--n~~yIayG~-kdg~IRVwdi---~t-~ir~llrGH~q----------------------VriWD~~~-g~pl- 199 (1165)
+.|++ ||+||+.+. .++.|+|||+ .+ .....+.+|.. |++||..+ |...
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred cEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 34454 688886655 4899999999 44 34444555544 99999987 6532
Q ss_pred -E--EecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccc
Q 001070 200 -I--ILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEA 276 (1165)
Q Consensus 200 -~--~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~a 276 (1165)
. .+..+.|..+.+++| .|++ ++|++++..+.+|++|++....| .+.+.+.+....... ....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~--~pdg---~~l~~~~~~~~~i~~~~~~~~~g--------~~~~~~~~~~~~~~~--~~~~ 231 (343)
T 1ri6_A 167 QDPAEVTTVEGAGPRHMVF--HPNE---QYAYCVNELNSSVDVWELKDPHG--------NIECVQTLDMMPENF--SDTR 231 (343)
T ss_dssp EEEEEEECSTTCCEEEEEE--CTTS---SEEEEEETTTTEEEEEESSCTTS--------CCEEEEEEECSCTTC--CSCC
T ss_pred ecccccccCCCCCcceEEE--CCCC---CEEEEEeCCCCEEEEEEecCCCC--------cEEEEeeccccCccc--cccC
Confidence 2 455555778999999 4554 44766778899999999854322 234555554211110 1234
Q ss_pred cEEEEEeecCCcEEEEeccCCCcEEEEEeecCCCccccccccccccccccceeeeeeccCC------C-CcceEEEEEee
Q 001070 277 FFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAEFTVTMPVLSFTGTIDP------P-SEHIIKLYCVQ 349 (1165)
Q Consensus 277 ff~sV~~~p~a~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiaeF~v~~PILSft~~~d~------~-ge~~vq~yCvQ 349 (1165)
....++++|++++|++++...+.|+.+.+..... .+..+..+.....+..+....|+ + +.+.|.+|-+-
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~----~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGS----VLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC----CEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCC----ceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 5667899999999999998889999999874222 22333334333334455544444 2 34678888665
No 128
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.56 E-value=3.5e-07 Score=95.63 Aligned_cols=119 Identities=14% Similarity=0.177 Sum_probs=88.8
Q ss_pred cEeeecCceEEEeecCCcEEEEeCcc-hh---hHhhcCCcc-----------------------EEEeecCCC------c
Q 001070 151 RQIAVNKHYVCYGLKGGNVRVLNLNT-AT---RSLLRGHTK-----------------------IKIWEDSKV------A 197 (1165)
Q Consensus 151 R~IAVn~~yIayG~kdg~IRVwdi~t-~i---r~llrGH~q-----------------------VriWD~~~g------~ 197 (1165)
+.++.++..|++|..||.|+|||+.+ .. +....+|.. |+|||...+ .
T Consensus 154 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~ 233 (342)
T 1yfq_A 154 FTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS 233 (342)
T ss_dssp EEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCT
T ss_pred EEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccc
Confidence 45777777899999999999999987 22 112223221 999999876 7
Q ss_pred eeEEecCCCC--------CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCC
Q 001070 198 PLIILKPHGG--------QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSA 269 (1165)
Q Consensus 198 pl~~lephdG--------~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~ 269 (1165)
++..++.|.. .+|++++| .|++ .+|+ +|+.|++|++||+.. ++|+.+|..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~~~--s~~~---~~l~-~~~~dg~i~vwd~~~------------~~~~~~~~~---- 291 (342)
T 1yfq_A 234 KRFAFRCHRLNLKDTNLAYPVNSIEF--SPRH---KFLY-TAGSDGIISCWNLQT------------RKKIKNFAK---- 291 (342)
T ss_dssp TCEEEECCCCCTTCCSSCCCEEEEEE--CTTT---CCEE-EEETTSCEEEEETTT------------TEEEEECCC----
T ss_pred cceeeecccccccccccceeEEEEEE--cCCC---CEEE-EecCCceEEEEcCcc------------HhHhhhhhc----
Confidence 8899998853 28999999 4554 4466 577899999999844 488888874
Q ss_pred CCccc-cccEEEEEeecCCcEEEEeccCC
Q 001070 270 KPRVE-EAFFNQVVVLSQAGLLLFANAKK 297 (1165)
Q Consensus 270 ~~~~~-~aff~sV~~~p~a~~ilLan~~r 297 (1165)
| ..-+..++ |++.+|+.+....
T Consensus 292 ----~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 292 ----FNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp ----CSSSEEEEEE--ECSSEEEEEEECT
T ss_pred ----ccCCCceEec--CCCCeEEEEecCC
Confidence 4 66677777 9999988876553
No 129
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.54 E-value=2.7e-07 Score=110.35 Aligned_cols=128 Identities=11% Similarity=0.065 Sum_probs=90.4
Q ss_pred ccEeeecCceEEEeecCCcEEEEeCcchhhHhhcCCcc---------------------------EEEeecCCCc-----
Q 001070 150 GRQIAVNKHYVCYGLKGGNVRVLNLNTATRSLLRGHTK---------------------------IKIWEDSKVA----- 197 (1165)
Q Consensus 150 GR~IAVn~~yIayG~kdg~IRVwdi~t~ir~llrGH~q---------------------------VriWD~~~g~----- 197 (1165)
+=..+.||++||.|..||.|||||.++.+. ++. |.. |||||..++.
T Consensus 90 ~vawSPdG~~LAs~s~dg~V~iwd~~~~l~-~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 90 VCKPSPIDDWMAVLSNNGNVSVFKDNKMLT-NLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEETTEEEE-ECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCceee-ecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccc
Confidence 334666899999999999999999877222 345 441 9999999874
Q ss_pred --eeEEecCCC---CCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCc
Q 001070 198 --PLIILKPHG---GQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPR 272 (1165)
Q Consensus 198 --pl~~lephd---G~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~ 272 (1165)
.+.+++.|. ..+|++|+|. |+| ++ +|+.|++||||++..+. .-.+.+||.-
T Consensus 168 ~i~l~ti~~~~~gh~~~V~sVawS--Pdg-----La-ass~D~tVrlWd~~~~~---------~~~~~~tL~~------- 223 (588)
T 2j04_A 168 FYFESSIRLSDAGSKDWVTHIVWY--EDV-----LV-AALSNNSVFSMTVSASS---------HQPVSRMIQN------- 223 (588)
T ss_dssp CEEEEEEECSCTTCCCCEEEEEEE--TTE-----EE-EEETTCCEEEECCCSSS---------SCCCEEEEEC-------
T ss_pred ceeeeeeecccccccccEEEEEEc--CCc-----EE-EEeCCCeEEEEECCCCc---------cccceeeecc-------
Confidence 378884332 2499999995 544 45 46679999999986652 1135577841
Q ss_pred cccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 273 VEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 273 ~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
+|.+.+.+|+.+ +++|+.+.. ..|+..++.-
T Consensus 224 ~h~~~V~svaFs--g~~LASa~~--~tIkLWd~~~ 254 (588)
T 2j04_A 224 ASRRKITDLKIV--DYKVVLTCP--GYVHKIDLKN 254 (588)
T ss_dssp CCSSCCCCEEEE--TTEEEEECS--SEEEEEETTT
T ss_pred cccCcEEEEEEE--CCEEEEEeC--CeEEEEECCC
Confidence 356777788877 577777753 5777777653
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.45 E-value=1.4e-06 Score=97.57 Aligned_cols=127 Identities=9% Similarity=0.054 Sum_probs=89.9
Q ss_pred eeecCceEEEeecCC---cEEEEeCcchhhHhhcCCcc-------------------------EEEeecCCCceeEEecC
Q 001070 153 IAVNKHYVCYGLKGG---NVRVLNLNTATRSLLRGHTK-------------------------IKIWEDSKVAPLIILKP 204 (1165)
Q Consensus 153 IAVn~~yIayG~kdg---~IRVwdi~t~ir~llrGH~q-------------------------VriWD~~~g~pl~~lep 204 (1165)
++-||++|+|+..++ .|+|||+.+..+..+.+|.. |++||..++. +.++..
T Consensus 186 ~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~-~~~l~~ 264 (415)
T 2hqs_A 186 WSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-IRQVTD 264 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-EEECCC
T ss_pred EcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC-EEeCcC
Confidence 445899999999885 99999999833345666664 8899999887 467777
Q ss_pred CCCCCcceeEeecCCCCCCceEEEeecCCCc--eEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEE
Q 001070 205 HGGQPVNSAQYLTAPNQAGHIILVTAGPLNR--EVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVV 282 (1165)
Q Consensus 205 hdG~sV~SVaFl~aP~~~d~~~lvtsGslnr--tIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~ 282 (1165)
|. ..+.+++| +|++ ++|+.++..+. .|.+|++.++ ++ .++.+ +...+..++
T Consensus 265 ~~-~~~~~~~~--spdg---~~l~~~s~~~g~~~i~~~d~~~~------------~~-~~l~~--------~~~~~~~~~ 317 (415)
T 2hqs_A 265 GR-SNNTEPTW--FPDS---QNLAFTSDQAGRPQVYKVNINGG------------AP-QRITW--------EGSQNQDAD 317 (415)
T ss_dssp CS-SCEEEEEE--CTTS---SEEEEEECTTSSCEEEEEETTSS------------CC-EECCC--------SSSEEEEEE
T ss_pred CC-CcccceEE--CCCC---CEEEEEECCCCCcEEEEEECCCC------------CE-EEEec--------CCCcccCeE
Confidence 74 48999999 4555 44665554444 5666676443 33 23332 335667889
Q ss_pred eecCCcEEEEeccC--CCcEEEEEeec
Q 001070 283 VLSQAGLLLFANAK--KNAIYSVHLGY 307 (1165)
Q Consensus 283 ~~p~a~~ilLan~~--r~aIYalhl~~ 307 (1165)
++|++.+|+.+... ...||.+.+.-
T Consensus 318 ~spdG~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 318 VSSDGKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp ECTTSSEEEEEEECSSCEEEEEEETTT
T ss_pred ECCCCCEEEEEECcCCceEEEEEECCC
Confidence 99999999888765 46788887764
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.45 E-value=4.8e-06 Score=87.43 Aligned_cols=132 Identities=13% Similarity=0.134 Sum_probs=96.4
Q ss_pred eeecCceEEE-eecCCcEEEEeCcc-hhhHhhcCCc------------c---------------------EEEeecCCCc
Q 001070 153 IAVNKHYVCY-GLKGGNVRVLNLNT-ATRSLLRGHT------------K---------------------IKIWEDSKVA 197 (1165)
Q Consensus 153 IAVn~~yIay-G~kdg~IRVwdi~t-~ir~llrGH~------------q---------------------VriWD~~~g~ 197 (1165)
+.-||++|.. +..++.|++||.++ .+...+..|. . |++||..++.
T Consensus 96 ~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~ 175 (353)
T 3vgz_A 96 INNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIK 175 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE
T ss_pred ECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc
Confidence 4446786654 45579999999987 4433333322 0 8999999998
Q ss_pred eeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcccccc
Q 001070 198 PLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAF 277 (1165)
Q Consensus 198 pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~af 277 (1165)
.+..+..+ |..+++++|. |++ ++|+++. .+.+|.+||+.++ +++.++.+... ++..+
T Consensus 176 ~~~~~~~~-~~~~~~~~~s--~dg---~~l~~~~-~~~~i~~~d~~~~------------~~~~~~~~~~~----~~~~~ 232 (353)
T 3vgz_A 176 LKTAIQNT-GKMSTGLALD--SEG---KRLYTTN-ADGELITIDTADN------------KILSRKKLLDD----GKEHF 232 (353)
T ss_dssp EEEEECCC-CTTCCCCEEE--TTT---TEEEEEC-TTSEEEEEETTTT------------EEEEEEECCCS----SSCCC
T ss_pred eEEEecCC-CCccceEEEC--CCC---CEEEEEc-CCCeEEEEECCCC------------eEEEEEEcCCC----CCCcc
Confidence 88887644 6679999994 555 4466544 4889999998544 77778775322 23567
Q ss_pred EEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 278 FNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 278 f~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
+..++++|++++|++++...+.||++.+..
T Consensus 233 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 233 FINISLDTARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp EEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 888999999999999999999999998754
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.41 E-value=1.3e-06 Score=97.95 Aligned_cols=124 Identities=12% Similarity=0.130 Sum_probs=88.1
Q ss_pred CceEEEeecC------CcEEEEeCcchhhHhhcCCcc-------------------------EEEeecCCCceeEEecCC
Q 001070 157 KHYVCYGLKG------GNVRVLNLNTATRSLLRGHTK-------------------------IKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 157 ~~yIayG~kd------g~IRVwdi~t~ir~llrGH~q-------------------------VriWD~~~g~pl~~leph 205 (1165)
+..|+|+.++ +.|+|||+++.....|.+|.. |++||..+|.+. ++..|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~ 221 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASF 221 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecC
Confidence 6677787775 799999999844456667765 899999998854 56666
Q ss_pred CCCCcceeEeecCCCCCCceEEEeecCC--CceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEe
Q 001070 206 GGQPVNSAQYLTAPNQAGHIILVTAGPL--NREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVV 283 (1165)
Q Consensus 206 dG~sV~SVaFl~aP~~~d~~~lvtsGsl--nrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~ 283 (1165)
.| .|++++| +|+| +.|+.+++. +.+|++||+.++ +| .+|.. +...+..++.
T Consensus 222 ~~-~~~~~~~--spdg---~~la~~~~~~g~~~i~~~d~~~~------------~~-~~l~~--------~~~~~~~~~~ 274 (415)
T 2hqs_A 222 PR-HNGAPAF--SPDG---SKLAFALSKTGSLNLYVMDLASG------------QI-RQVTD--------GRSNNTEPTW 274 (415)
T ss_dssp SS-CEEEEEE--CTTS---SEEEEEECTTSSCEEEEEETTTC------------CE-EECCC--------CSSCEEEEEE
T ss_pred CC-cccCEEE--cCCC---CEEEEEEecCCCceEEEEECCCC------------CE-EeCcC--------CCCcccceEE
Confidence 54 8999999 4655 435544544 456999998554 45 34442 4456778999
Q ss_pred ecCCcEEEEecc--CCCcEEEEEeecC
Q 001070 284 LSQAGLLLFANA--KKNAIYSVHLGYG 308 (1165)
Q Consensus 284 ~p~a~~ilLan~--~r~aIYalhl~~g 308 (1165)
+|++++|+.+.. .+..||.+.+.-+
T Consensus 275 spdg~~l~~~s~~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 275 FPDSQNLAFTSDQAGRPQVYKVNINGG 301 (415)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred CCCCCEEEEEECCCCCcEEEEEECCCC
Confidence 999998877654 3447998887644
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.39 E-value=1e-06 Score=103.32 Aligned_cols=128 Identities=9% Similarity=0.099 Sum_probs=94.3
Q ss_pred eeecCceEEEeecCCcEEEEeC--cc-hhhHhhcCC--------------cc------------EEEeecCCCceeEEec
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNL--NT-ATRSLLRGH--------------TK------------IKIWEDSKVAPLIILK 203 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi--~t-~ir~llrGH--------------~q------------VriWD~~~g~pl~~le 203 (1165)
++-||+||+.+.+|+.|+|||+ .+ .+...+..+ .. |+|||..++.++.++.
T Consensus 186 ~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 186 MSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec
Confidence 4447999999999999999999 55 222222211 12 9999999999998887
Q ss_pred CC----------CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEE--EEeccCCCCC
Q 001070 204 PH----------GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQ--TLDLKSSAKP 271 (1165)
Q Consensus 204 ph----------dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~Q--TLe~~~s~~~ 271 (1165)
.+ .+..|.+++| +|+++ ++++++..+.+|.+||.+.. +|+. ++.
T Consensus 266 ~~g~~~~~~~~~~~~~v~~i~~--s~~~~---~~~vs~~~~g~i~vvd~~~~------------~~l~~~~i~------- 321 (543)
T 1nir_A 266 TRGMTVDTQTYHPEPRVAAIIA--SHEHP---EFIVNVKETGKVLLVNYKDI------------DNLTVTSIG------- 321 (543)
T ss_dssp CCEECSSSCCEESCCCEEEEEE--CSSSS---EEEEEETTTTEEEEEECTTS------------SSCEEEEEE-------
T ss_pred ccCcccCccccccCCceEEEEE--CCCCC---EEEEEECCCCeEEEEEecCC------------CcceeEEec-------
Confidence 53 1236889999 45554 36667889999999998654 3333 443
Q ss_pred ccccccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 272 RVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 272 ~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
+..|...++++|+++|+++++...+.|.++.+.
T Consensus 322 --~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~ 354 (543)
T 1nir_A 322 --AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK 354 (543)
T ss_dssp --CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred --cCcCccCceECCCCCEEEEEecCCCeEEEEECC
Confidence 235666789999999999999999999997654
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.38 E-value=9.3e-06 Score=85.17 Aligned_cols=120 Identities=9% Similarity=0.132 Sum_probs=87.1
Q ss_pred EEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCce-eEEecCCCCCCcceeEe
Q 001070 160 VCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAP-LIILKPHGGQPVNSAQY 215 (1165)
Q Consensus 160 IayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~p-l~~lephdG~sV~SVaF 215 (1165)
++++..++.|+|||..+ .+..++..|.. |++||..++.. +..+..+ +.+.++++|
T Consensus 13 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~ 91 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG-QSSMADVDI 91 (331)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC-SSCCCCEEE
T ss_pred EEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC-CCCccceEE
Confidence 45778899999999987 44444443332 99999998887 7777655 346666999
Q ss_pred ecCCCCCCceEEEeecCCCc--eEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEe
Q 001070 216 LTAPNQAGHIILVTAGPLNR--EVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFA 293 (1165)
Q Consensus 216 l~aP~~~d~~~lvtsGslnr--tIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLa 293 (1165)
+|++ ++|+++...+. +|++||+..+ ++++++... .-.+.++++|++++|+++
T Consensus 92 --s~dg---~~l~~~~~~~~~~~i~v~d~~~~------------~~~~~~~~~---------~~~~~~~~spdg~~l~~~ 145 (331)
T 3u4y_A 92 --TPDD---QFAVTVTGLNHPFNMQSYSFLKN------------KFISTIPIP---------YDAVGIAISPNGNGLILI 145 (331)
T ss_dssp --CTTS---SEEEECCCSSSSCEEEEEETTTT------------EEEEEEECC---------TTEEEEEECTTSSCEEEE
T ss_pred --CCCC---CEEEEecCCCCcccEEEEECCCC------------CeEEEEECC---------CCccceEECCCCCEEEEE
Confidence 4554 44665444445 9999998544 788888741 223689999999999999
Q ss_pred ccCCCc-EEEEEee
Q 001070 294 NAKKNA-IYSVHLG 306 (1165)
Q Consensus 294 n~~r~a-IYalhl~ 306 (1165)
+...+. |+...+.
T Consensus 146 ~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 146 DRSSANTVRRFKID 159 (331)
T ss_dssp EETTTTEEEEEEEC
T ss_pred ecCCCceEEEEEEC
Confidence 988788 8877776
No 135
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.35 E-value=1.6e-05 Score=84.53 Aligned_cols=140 Identities=13% Similarity=0.170 Sum_probs=95.2
Q ss_pred eeecCceEEEee-cCCcEEEEeCcc--hhh---Hh-hcCCc-----------------------------cEEEeecC-C
Q 001070 153 IAVNKHYVCYGL-KGGNVRVLNLNT--ATR---SL-LRGHT-----------------------------KIKIWEDS-K 195 (1165)
Q Consensus 153 IAVn~~yIayG~-kdg~IRVwdi~t--~ir---~l-lrGH~-----------------------------qVriWD~~-~ 195 (1165)
+.-||+||+++. .+|.|+|||+.. ..+ .+ ..|.. .|++||.. +
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC
Confidence 344689888877 689999999962 111 11 11110 19999988 5
Q ss_pred Cce--eEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcc
Q 001070 196 VAP--LIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRV 273 (1165)
Q Consensus 196 g~p--l~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~ 273 (1165)
|.. +..+..+.|..+.+++| +|+| ++|++++..+.+|++|++....| .+.+++++....... .
T Consensus 173 g~~~~~~~~~~~~g~~p~~~~~--spdg---~~l~v~~~~~~~v~v~~~~~~~g--------~~~~~~~~~~~~~~~--~ 237 (347)
T 3hfq_A 173 GQLSEQSVLTMEAGFGPRHLVF--SPDG---QYAFLAGELSSQIASLKYDTQTG--------AFTQLGIVKTIPADY--T 237 (347)
T ss_dssp SCEEEEEEEECCTTCCEEEEEE--CTTS---SEEEEEETTTTEEEEEEEETTTT--------EEEEEEEEESSCTTC--C
T ss_pred CcEEEeeeEEcCCCCCCceEEE--CCCC---CEEEEEeCCCCEEEEEEecCCCC--------ceEEeeeeeecCCCC--C
Confidence 642 34445556778889999 4554 55777788999999999865322 345666665432211 1
Q ss_pred ccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 274 EEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 274 ~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
.......++++|++++|++++...+.|+++.+..
T Consensus 238 ~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 238 AHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp SCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred CCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 1245678999999999999999899999998863
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.32 E-value=4.6e-06 Score=97.76 Aligned_cols=140 Identities=6% Similarity=0.061 Sum_probs=104.4
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-hhhHhhc-CCcc--------------------EEEeec--CCCceeEEecCCCCC
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLR-GHTK--------------------IKIWED--SKVAPLIILKPHGGQ 208 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-~ir~llr-GH~q--------------------VriWD~--~~g~pl~~lephdG~ 208 (1165)
+..++++++++..|+.|+|||..+ .+...+. ||.- |++||. .++..+.++.. |.
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~--g~ 222 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI--GI 222 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC--CS
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec--CC
Confidence 344677888999999999999998 5555565 6552 999999 88888888873 56
Q ss_pred CcceeEeecCCC-CCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCC--ccc-cccEEEEEee
Q 001070 209 PVNSAQYLTAPN-QAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKP--RVE-EAFFNQVVVL 284 (1165)
Q Consensus 209 sV~SVaFl~aP~-~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~--~~~-~aff~sV~~~ 284 (1165)
.+.+|+| +|. +.|+++|++++..+.+|++||..+ ++|++++........ ..| +..+..++++
T Consensus 223 ~p~~va~--sp~~~~dg~~l~v~~~~~~~v~v~D~~t------------~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s 288 (543)
T 1nir_A 223 EARSVES--SKFKGYEDRYTIAGAYWPPQFAIMDGET------------LEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS 288 (543)
T ss_dssp EEEEEEE--CCSTTCTTTEEEEEEEESSEEEEEETTT------------CCEEEEEECCEECSSSCCEESCCCEEEEEEC
T ss_pred CcceEEe--CCCcCCCCCEEEEEEccCCeEEEEeccc------------cccceeecccCcccCccccccCCceEEEEEC
Confidence 7899999 451 115566888777899999999743 499999986321100 001 2256688999
Q ss_pred cCCcEEEEeccCCCcEEEEEeecC
Q 001070 285 SQAGLLLFANAKKNAIYSVHLGYG 308 (1165)
Q Consensus 285 p~a~~ilLan~~r~aIYalhl~~g 308 (1165)
|+++.+++++...+.|+.+.+.-+
T Consensus 289 ~~~~~~~vs~~~~g~i~vvd~~~~ 312 (543)
T 1nir_A 289 HEHPEFIVNVKETGKVLLVNYKDI 312 (543)
T ss_dssp SSSSEEEEEETTTTEEEEEECTTS
T ss_pred CCCCEEEEEECCCCeEEEEEecCC
Confidence 999999999999999999887643
No 137
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.31 E-value=2.5e-05 Score=83.74 Aligned_cols=136 Identities=13% Similarity=0.118 Sum_probs=91.0
Q ss_pred EeeecCceEEEee-cCCcEEEEeCcc--hhhHhh-----cC-------------Ccc------------------EEEee
Q 001070 152 QIAVNKHYVCYGL-KGGNVRVLNLNT--ATRSLL-----RG-------------HTK------------------IKIWE 192 (1165)
Q Consensus 152 ~IAVn~~yIayG~-kdg~IRVwdi~t--~ir~ll-----rG-------------H~q------------------VriWD 192 (1165)
.+++||+||+.+. .+|.|+|||+.+ .++.+. .| |.- |+|||
T Consensus 104 ~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~ 183 (361)
T 3scy_A 104 YLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFN 183 (361)
T ss_dssp EEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 4677999887765 578999999975 222211 11 111 89998
Q ss_pred cCCCce------e------EEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceE
Q 001070 193 DSKVAP------L------IILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCT 260 (1165)
Q Consensus 193 ~~~g~p------l------~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~ 260 (1165)
.....- + ..+....|..+.+++| +|++ ++|++++..+.+|.+|++..+ .+..+
T Consensus 184 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--spdg---~~l~v~~~~~~~v~v~~~~~g----------~~~~~ 248 (361)
T 3scy_A 184 INPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIF--NSDG---KFAYLINEIGGTVIAFRYADG----------MLDEI 248 (361)
T ss_dssp ECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEE--CTTS---SEEEEEETTTCEEEEEEEETT----------EEEEE
T ss_pred EcCCCCcccccceeecccccceecCCCCCCeEEEE--cCCC---CEEEEEcCCCCeEEEEEecCC----------ceEEe
Confidence 764321 1 2333344667899999 4554 557777888999999998633 23445
Q ss_pred EEEeccCCCCCccccccEEEEEeecCCcEEEEeccC-CCcEEEEEeec
Q 001070 261 QTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAK-KNAIYSVHLGY 307 (1165)
Q Consensus 261 QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~-r~aIYalhl~~ 307 (1165)
+++..... +......++++|++++|++++.. .+.|+++.+..
T Consensus 249 ~~~~~~~~-----~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~ 291 (361)
T 3scy_A 249 QTVAADTV-----NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDE 291 (361)
T ss_dssp EEEESCSS-----CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECT
T ss_pred EEEecCCC-----CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcC
Confidence 55553221 12334688999999999999988 88888888863
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.30 E-value=3.2e-06 Score=88.62 Aligned_cols=126 Identities=8% Similarity=0.114 Sum_probs=88.4
Q ss_pred eeecCceEEEeecCC---cEEEEeCcc-hhhHhhcCCcc-----------------------EEEeecCCCcee-----E
Q 001070 153 IAVNKHYVCYGLKGG---NVRVLNLNT-ATRSLLRGHTK-----------------------IKIWEDSKVAPL-----I 200 (1165)
Q Consensus 153 IAVn~~yIayG~kdg---~IRVwdi~t-~ir~llrGH~q-----------------------VriWD~~~g~pl-----~ 200 (1165)
++-||+||+.+..++ .|+|||+.+ .+...+..+.. |++||......+ .
T Consensus 91 ~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 91 ITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp ECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred ECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc
Confidence 444688988665553 899999987 44444444433 788887653222 2
Q ss_pred EecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcce---EEEEeccCCCCCcccccc
Q 001070 201 ILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKC---TQTLDLKSSAKPRVEEAF 277 (1165)
Q Consensus 201 ~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C---~QTLe~~~s~~~~~~~af 277 (1165)
.+ + .|..+.+++| +|++ ++|++++..+.+|.+||+..+ ++ +.++... ..
T Consensus 171 ~~-~-~~~~~~~~~~--spdg---~~l~v~~~~~~~v~v~d~~~~------------~~~~~~~~~~~~---------~~ 222 (331)
T 3u4y_A 171 FI-S-GGTRPFNITF--TPDG---NFAFVANLIGNSIGILETQNP------------ENITLLNAVGTN---------NL 222 (331)
T ss_dssp EE-C-SSSSEEEEEE--CTTS---SEEEEEETTTTEEEEEECSST------------TSCEEEEEEECS---------SC
T ss_pred cc-c-CCCCccceEE--CCCC---CEEEEEeCCCCeEEEEECCCC------------cccceeeeccCC---------CC
Confidence 22 2 2567899999 4554 557777888999999998544 55 6777631 33
Q ss_pred EEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 278 FNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 278 f~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
...++++|++++|++++...+.||++.+.
T Consensus 223 ~~~~~~spdg~~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 223 PGTIVVSRDGSTVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp CCCEEECTTSSEEEEECSSEEEEEEEETT
T ss_pred CceEEECCCCCEEEEEEcCCCEEEEEECC
Confidence 34788999999999999999999997664
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.28 E-value=7.7e-06 Score=85.89 Aligned_cols=115 Identities=10% Similarity=0.096 Sum_probs=85.8
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-hhhHhhc----CCcc-----------------------EEEeecCCCceeEEecC
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLR----GHTK-----------------------IKIWEDSKVAPLIILKP 204 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-~ir~llr----GH~q-----------------------VriWD~~~g~pl~~lep 204 (1165)
+..||++|+.+..++.|++||..+ .+...+. ||.. |++||..++..+..+..
T Consensus 192 ~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 271 (353)
T 3vgz_A 192 LDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA 271 (353)
T ss_dssp EETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 445799999999999999999987 4333332 2222 99999999988887775
Q ss_pred CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEee
Q 001070 205 HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVL 284 (1165)
Q Consensus 205 hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~ 284 (1165)
+ + ...++| .|++ +++++++..+.+|.+||..++ ++++++.. ......++++
T Consensus 272 ~--~-~~~~~~--s~dg---~~l~v~~~~~~~v~~~d~~~~------------~~~~~~~~---------~~~~~~~~~s 322 (353)
T 3vgz_A 272 P--E-SLAVLF--NPAR---NEAYVTHRQAGKVSVIDAKSY------------KVVKTFDT---------PTHPNSLALS 322 (353)
T ss_dssp S--S-CCCEEE--ETTT---TEEEEEETTTTEEEEEETTTT------------EEEEEEEC---------CSEEEEEEEC
T ss_pred C--C-CceEEE--CCCC---CEEEEEECCCCeEEEEECCCC------------eEEEEEec---------CCCCCeEEEc
Confidence 3 2 367999 4555 446667888999999997443 78888874 2345688999
Q ss_pred cCCcEEEEeccC
Q 001070 285 SQAGLLLFANAK 296 (1165)
Q Consensus 285 p~a~~ilLan~~ 296 (1165)
|++++|++++..
T Consensus 323 ~dg~~l~v~~~~ 334 (353)
T 3vgz_A 323 ADGKTLYVSVKQ 334 (353)
T ss_dssp TTSCEEEEEEEC
T ss_pred CCCCEEEEEEcc
Confidence 999999999876
No 140
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.26 E-value=2.2e-06 Score=97.27 Aligned_cols=129 Identities=12% Similarity=0.116 Sum_probs=90.2
Q ss_pred cccEeeec--CceEEEeecCCcEEEEeCcch---------------------------h---------hHhh----cCCc
Q 001070 149 IGRQIAVN--KHYVCYGLKGGNVRVLNLNTA---------------------------T---------RSLL----RGHT 186 (1165)
Q Consensus 149 ~GR~IAVn--~~yIayG~kdg~IRVwdi~t~---------------------------i---------r~ll----rGH~ 186 (1165)
.+..||+. +.+|+.|..|| |+||+.... + +.|+ .|..
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence 36778885 78899998888 999876431 1 1122 2333
Q ss_pred c--EEEeecCCC--------ce---eEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCC
Q 001070 187 K--IKIWEDSKV--------AP---LIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTH 253 (1165)
Q Consensus 187 q--VriWD~~~g--------~p---l~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~ 253 (1165)
. |+|||+.++ .+ +..+.+| +..|.+|+| .|+.+. ++++|+.|++|+|||+..+
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~--~p~~~~---~las~s~Dg~v~iwD~~~~-------- 182 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA-GGMVIDMKW--NPTVPS---MVAVCLADGSIAVLQVTET-------- 182 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG-GGSEEEEEE--CSSCTT---EEEEEETTSCEEEEEESSS--------
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCC-CCceEEEEE--CCCCCC---EEEEEECCCeEEEEEcCCC--------
Confidence 3 899998765 33 4555556 348999999 566444 5667889999999998543
Q ss_pred CCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEe
Q 001070 254 AESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 254 ~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl 305 (1165)
.|+.++. +|..-+..++.+|++.+|+.+... ..|+...+
T Consensus 183 ----~~~~~~~--------~~~~~v~~v~wspdg~~lasgs~d-g~v~iwd~ 221 (434)
T 2oit_A 183 ----VKVCATL--------PSTVAVTSVCWSPKGKQLAVGKQN-GTVVQYLP 221 (434)
T ss_dssp ----EEEEEEE--------CGGGCEEEEEECTTSSCEEEEETT-SCEEEECT
T ss_pred ----cceeecc--------CCCCceeEEEEcCCCCEEEEEcCC-CcEEEEcc
Confidence 6665555 366778899999999999988855 45665544
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.25 E-value=5.8e-06 Score=85.97 Aligned_cols=132 Identities=12% Similarity=0.099 Sum_probs=89.5
Q ss_pred eeecCceEEEeecC-CcEEEEeCc--c-hhh--HhhcCCcc----------------------EEEeecC---CCceeEE
Q 001070 153 IAVNKHYVCYGLKG-GNVRVLNLN--T-ATR--SLLRGHTK----------------------IKIWEDS---KVAPLII 201 (1165)
Q Consensus 153 IAVn~~yIayG~kd-g~IRVwdi~--t-~ir--~llrGH~q----------------------VriWD~~---~g~pl~~ 201 (1165)
+..||+||+++..+ +.|+|||+. + ..+ ..+..+.. |+|||.. ++..+..
T Consensus 45 ~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 124 (343)
T 1ri6_A 45 VSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV 124 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEE
T ss_pred ECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccc
Confidence 33479999998886 999999997 3 222 12222222 9999984 3445666
Q ss_pred ecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEE--EEeccCCCCCccccccEE
Q 001070 202 LKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQ--TLDLKSSAKPRVEEAFFN 279 (1165)
Q Consensus 202 lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~Q--TLe~~~s~~~~~~~aff~ 279 (1165)
+..+ ..+++++| .|++ +++++++..+.+|++|++... ....+.. .+.+. ......
T Consensus 125 ~~~~--~~~~~~~~--s~dg---~~l~~~~~~~~~v~~~d~~~~---------~~~~~~~~~~~~~~-------~~~~~~ 181 (343)
T 1ri6_A 125 VEGL--DGCHSANI--SPDN---RTLWVPALKQDRICLFTVSDD---------GHLVAQDPAEVTTV-------EGAGPR 181 (343)
T ss_dssp ECCC--TTBCCCEE--CTTS---SEEEEEEGGGTEEEEEEECTT---------SCEEEEEEEEEECS-------TTCCEE
T ss_pred ccCC--CCceEEEE--CCCC---CEEEEecCCCCEEEEEEecCC---------CceeeecccccccC-------CCCCcc
Confidence 6543 46999999 4554 447777768899999998652 1123333 33331 123455
Q ss_pred EEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 280 QVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 280 sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
.++++|++++|++++...+.|+.+.+..
T Consensus 182 ~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 182 HMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 7899999999999998889999988853
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.20 E-value=3.5e-06 Score=88.07 Aligned_cols=127 Identities=11% Similarity=0.082 Sum_probs=85.7
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCc--c----------------------EEEeecCCCceeEEecC-CC
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHT--K----------------------IKIWEDSKVAPLIILKP-HG 206 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~--q----------------------VriWD~~~g~pl~~lep-hd 206 (1165)
++.++++++++..++.|+|||..+ .+...+..+. . |++||..++..+.++.- +.
T Consensus 7 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~ 86 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV 86 (349)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCS
T ss_pred ccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc
Confidence 555788888999999999999998 5544555444 2 99999999887777763 32
Q ss_pred ----CCCcceeEeecCCCCCCceEEEeecCC-----------CceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCC
Q 001070 207 ----GQPVNSAQYLTAPNQAGHIILVTAGPL-----------NREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKP 271 (1165)
Q Consensus 207 ----G~sV~SVaFl~aP~~~d~~~lvtsGsl-----------nrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~ 271 (1165)
|..+++++| +|++ ++|++++.. +.+|.+||+++++ ..+++.++..+
T Consensus 87 ~~~~~~~~~~~~~--spdg---~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---------~~~~~~~~~~~----- 147 (349)
T 1jmx_B 87 PGEVGRSMYSFAI--SPDG---KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL---------EAKPVRTFPMP----- 147 (349)
T ss_dssp TTEEEECSSCEEE--CTTS---SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG---------GBCCSEEEECC-----
T ss_pred cccccccccceEE--CCCC---CEEEEEcccccccccccccCCCeEEEEECCCcc---------ccceeeeccCC-----
Confidence 456999999 4554 446665533 4899999997642 12444555431
Q ss_pred ccccccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 272 RVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 272 ~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
..+..++++|++. |++++. .||++.+.
T Consensus 148 ----~~~~~~~~s~dg~-l~~~~~---~i~~~d~~ 174 (349)
T 1jmx_B 148 ----RQVYLMRAADDGS-LYVAGP---DIYKMDVK 174 (349)
T ss_dssp ----SSCCCEEECTTSC-EEEESS---SEEEECTT
T ss_pred ----CcccceeECCCCc-EEEccC---cEEEEeCC
Confidence 1244677899999 555432 37776544
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.19 E-value=8.1e-06 Score=95.67 Aligned_cols=93 Identities=14% Similarity=0.154 Sum_probs=60.8
Q ss_pred EEEeecCCCceeEEecCCC-----CCCcceeEeecCCCCCCceEEEee---cCCCceEEEeEccCcCCCCCCCCCCCcce
Q 001070 188 IKIWEDSKVAPLIILKPHG-----GQPVNSAQYLTAPNQAGHIILVTA---GPLNREVKLWASASEEGWSLPTHAESWKC 259 (1165)
Q Consensus 188 VriWD~~~g~pl~~lephd-----G~sV~SVaFl~aP~~~d~~~lvts---GslnrtIKLW~~a~~~~~~~~~~~~~w~C 259 (1165)
|++||..++....++.+++ +..|.+++| +||| ++|++. +..+.+|.+||++++ +|
T Consensus 230 l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~--SpDg---~~l~~~~~~~~~~~~i~~~d~~~g------------~~ 292 (723)
T 1xfd_A 230 LHVIGLNGPTHDLEMMPPDDPRMREYYITMVKW--ATST---KVAVTWLNRAQNVSILTLCDATTG------------VC 292 (723)
T ss_dssp EEEEESSSSCCCEECCCCCCGGGSSEEEEEEEE--SSSS---EEEEEEEETTSCEEEEEEEETTTC------------CE
T ss_pred EEEEECCCCceeEEeeCCccCCCccceeEEEEE--eCCC---eEEEEEEcCCCCeEEEEEEeCCCC------------cc
Confidence 5678887776666676552 347899999 4655 545443 345679999998554 78
Q ss_pred EEEEeccCCCCCccccccE----EEEEeecCCcEEEEe-ccCC------CcEEEEE
Q 001070 260 TQTLDLKSSAKPRVEEAFF----NQVVVLSQAGLLLFA-NAKK------NAIYSVH 304 (1165)
Q Consensus 260 ~QTLe~~~s~~~~~~~aff----~sV~~~p~a~~ilLa-n~~r------~aIYalh 304 (1165)
.+.+.... ..++ ..++.+|++++|+++ ..+. ..||.+.
T Consensus 293 ~~~~~~~~-------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 293 TKKHEDES-------EAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp EEEEEEEC-------SSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred eEEEEecc-------CCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 88876422 2222 267889999977765 4332 2577776
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.19 E-value=1.3e-05 Score=93.95 Aligned_cols=120 Identities=12% Similarity=0.145 Sum_probs=77.3
Q ss_pred cCCcEEEEeCcc-hhhHhhc--CCcc---------------------------EEEeecCCC-ceeEEecCCCCC---Cc
Q 001070 165 KGGNVRVLNLNT-ATRSLLR--GHTK---------------------------IKIWEDSKV-APLIILKPHGGQ---PV 210 (1165)
Q Consensus 165 kdg~IRVwdi~t-~ir~llr--GH~q---------------------------VriWD~~~g-~pl~~lephdG~---sV 210 (1165)
.++.|+|||+++ ..+.+.. +|.. |++||..+| .....+..+++. .+
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 457899999998 4444443 3443 889999988 433333322222 35
Q ss_pred ceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEE-EEeecCCcE
Q 001070 211 NSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQ-VVVLSQAGL 289 (1165)
Q Consensus 211 ~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~s-V~~~p~a~~ 289 (1165)
.+++|. |. .|+++++ +++.|.+++||..... +.+..+|.. +..-+.. ++++|++++
T Consensus 313 ~~~~~s--p~-~dg~~l~-~~~~~g~~~l~~~~~~-----------~~~~~~l~~--------~~~~v~~~~~~spdg~~ 369 (706)
T 2z3z_A 313 HPLTFL--PG-SNNQFIW-QSRRDGWNHLYLYDTT-----------GRLIRQVTK--------GEWEVTNFAGFDPKGTR 369 (706)
T ss_dssp SCCEEC--TT-CSSEEEE-EECTTSSCEEEEEETT-----------SCEEEECCC--------SSSCEEEEEEECTTSSE
T ss_pred CCceee--cC-CCCEEEE-EEccCCccEEEEEECC-----------CCEEEecCC--------CCeEEEeeeEEcCCCCE
Confidence 789994 50 0445565 4667889999998532 256677753 2222334 689999999
Q ss_pred EEEeccCCC----cEEEEEeec
Q 001070 290 LLFANAKKN----AIYSVHLGY 307 (1165)
Q Consensus 290 ilLan~~r~----aIYalhl~~ 307 (1165)
|+++..... .||.+.+.-
T Consensus 370 l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 370 LYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp EEEEESSSCTTCBEEEEEETTC
T ss_pred EEEEecCCCCceEEEEEEEcCC
Confidence 888776654 888887654
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.19 E-value=1e-05 Score=83.99 Aligned_cols=122 Identities=8% Similarity=-0.033 Sum_probs=85.7
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCc---------------------------------------------
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHT--------------------------------------------- 186 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~--------------------------------------------- 186 (1165)
++-||+||+++ ++.|+|||+.+ .+...+..+.
T Consensus 142 ~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (337)
T 1pby_B 142 WARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRT 219 (337)
T ss_dssp ECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEE
T ss_pred ECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccccccccccccccc
Confidence 44579998888 79999999987 4333333222
Q ss_pred cEEEeecCCCcee-EEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEec
Q 001070 187 KIKIWEDSKVAPL-IILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDL 265 (1165)
Q Consensus 187 qVriWD~~~g~pl-~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~ 265 (1165)
.|.+||..++... ..+.++ +..+++++| +|++ ++|+++ |.+|.+||+.+ ++++.++..
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~--s~dg---~~l~~~---~~~v~~~d~~~------------~~~~~~~~~ 278 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIM-DVFYFSTAV--NPAK---TRAFGA---YNVLESFDLEK------------NASIKRVPL 278 (337)
T ss_dssp EEEEEETTTCCEEEEEEEEC-SSCEEEEEE--CTTS---SEEEEE---ESEEEEEETTT------------TEEEEEEEC
T ss_pred ceEEEeCCCCCceEeecCCC-CCceeeEEE--CCCC---CEEEEe---CCeEEEEECCC------------CcCcceecC
Confidence 3589999988753 223344 347889999 4554 446665 79999999844 378888875
Q ss_pred cCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 266 KSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 266 ~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
. .....++++|++++|+++.. .+.|+++.+.-
T Consensus 279 ~---------~~~~~~~~s~dg~~l~~~~~-~~~i~v~d~~~ 310 (337)
T 1pby_B 279 P---------HSYYSVNVSTDGSTVWLGGA-LGDLAAYDAET 310 (337)
T ss_dssp S---------SCCCEEEECTTSCEEEEESB-SSEEEEEETTT
T ss_pred C---------CceeeEEECCCCCEEEEEcC-CCcEEEEECcC
Confidence 2 23457899999999998854 67888887653
No 146
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.16 E-value=2.4e-05 Score=83.94 Aligned_cols=135 Identities=10% Similarity=0.122 Sum_probs=90.7
Q ss_pred cEeee--cCceEEE-eecCCcEEEEeCcchhh--------------H-hhcCCcc----------------------EEE
Q 001070 151 RQIAV--NKHYVCY-GLKGGNVRVLNLNTATR--------------S-LLRGHTK----------------------IKI 190 (1165)
Q Consensus 151 R~IAV--n~~yIay-G~kdg~IRVwdi~t~ir--------------~-llrGH~q----------------------Vri 190 (1165)
..+++ ||+||+. +..++.|+|||++..-. . .+..+.. |++
T Consensus 158 ~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 237 (361)
T 3scy_A 158 HCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIA 237 (361)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEE
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEE
Confidence 33555 6887765 45589999999885211 1 1111111 999
Q ss_pred eecCCCce--eEEecCC--CCCCcceeEeecCCCCCCceEEEeecCC-CceEEEeEccCcCCCCCCCCCCCcceEEEEec
Q 001070 191 WEDSKVAP--LIILKPH--GGQPVNSAQYLTAPNQAGHIILVTAGPL-NREVKLWASASEEGWSLPTHAESWKCTQTLDL 265 (1165)
Q Consensus 191 WD~~~g~p--l~~leph--dG~sV~SVaFl~aP~~~d~~~lvtsGsl-nrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~ 265 (1165)
||..+|.. +..+... .+..+.+++| +|+ +++|++++.. +.+|++|++.... ..++++.++..
T Consensus 238 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~~--spd---g~~l~v~~~~~~~~i~v~~~~~~~--------g~~~~~~~~~~ 304 (361)
T 3scy_A 238 FRYADGMLDEIQTVAADTVNAQGSGDIHL--SPD---GKYLYASNRLKADGVAIFKVDETN--------GTLTKVGYQLT 304 (361)
T ss_dssp EEEETTEEEEEEEEESCSSCCCCEEEEEE--CTT---SSEEEEEECSSSCEEEEEEECTTT--------CCEEEEEEEEC
T ss_pred EEecCCceEEeEEEecCCCCCCCcccEEE--CCC---CCEEEEECCCCCCEEEEEEEcCCC--------CcEEEeeEecC
Confidence 99987753 3333322 2356789999 455 4567777777 8999999986432 23456666663
Q ss_pred cCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 266 KSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 266 ~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
......++++|+++||++++...+.|++..++.
T Consensus 305 ---------g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 305 ---------GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp ---------SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred ---------CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 133447899999999999998888888877764
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.15 E-value=9e-06 Score=84.35 Aligned_cols=122 Identities=8% Similarity=0.056 Sum_probs=85.9
Q ss_pred CceEEEeecCCcEEEEeCcc-hhhHhh-cCCc---c---------------------EEEeecCCCceeEEecCCC----
Q 001070 157 KHYVCYGLKGGNVRVLNLNT-ATRSLL-RGHT---K---------------------IKIWEDSKVAPLIILKPHG---- 206 (1165)
Q Consensus 157 ~~yIayG~kdg~IRVwdi~t-~ir~ll-rGH~---q---------------------VriWD~~~g~pl~~lephd---- 206 (1165)
+.||+++..++.|++||..+ .....+ .+|. - |++||..++..+.++.-..
T Consensus 1 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred CcEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 35888999999999999987 443333 3441 1 9999999998877776321
Q ss_pred CCCcceeEeecCCCCCCceEEEeecC-----------CCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcccc
Q 001070 207 GQPVNSAQYLTAPNQAGHIILVTAGP-----------LNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEE 275 (1165)
Q Consensus 207 G~sV~SVaFl~aP~~~d~~~lvtsGs-----------lnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~ 275 (1165)
|..+.+++| +|++ ++|+++.. .+.+|.+||+.++ ++++++...
T Consensus 81 ~~~~~~~~~--s~dg---~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~------------~~~~~~~~~--------- 134 (337)
T 1pby_B 81 VKSLFGAAL--SPDG---KTLAIYESPVRLELTHFEVQPTRVALYDAETL------------SRRKAFEAP--------- 134 (337)
T ss_dssp EECTTCEEE--CTTS---SEEEEEEEEEEECSSCEEECCCEEEEEETTTT------------EEEEEEECC---------
T ss_pred cccccceEE--CCCC---CEEEEEecccccccccccccCceEEEEECCCC------------cEEEEEeCC---------
Confidence 237899999 4554 33554421 4799999998543 777777741
Q ss_pred ccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 276 AFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
.....++++|++.+|++++ +.||++.+.-
T Consensus 135 ~~~~~~~~s~dg~~l~~~~---~~i~~~d~~~ 163 (337)
T 1pby_B 135 RQITMLAWARDGSKLYGLG---RDLHVMDPEA 163 (337)
T ss_dssp SSCCCEEECTTSSCEEEES---SSEEEEETTT
T ss_pred CCcceeEECCCCCEEEEeC---CeEEEEECCC
Confidence 2234678899999999984 6688887653
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.15 E-value=1.6e-05 Score=84.59 Aligned_cols=133 Identities=12% Similarity=0.099 Sum_probs=90.9
Q ss_pred eee--cCceEEEeecCCcEEEEeCcc--hhhHh--hcCCcc------------------------EEEeecCC--Cc--e
Q 001070 153 IAV--NKHYVCYGLKGGNVRVLNLNT--ATRSL--LRGHTK------------------------IKIWEDSK--VA--P 198 (1165)
Q Consensus 153 IAV--n~~yIayG~kdg~IRVwdi~t--~ir~l--lrGH~q------------------------VriWD~~~--g~--p 198 (1165)
+++ ||++++++..++.|+|||+.. .+..+ +..+.. |+|||... |. .
T Consensus 146 ~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 146 TDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred EEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE
Confidence 555 688777788899999999982 22211 111110 88998764 43 2
Q ss_pred eEEecCCC-C----CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcc
Q 001070 199 LIILKPHG-G----QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRV 273 (1165)
Q Consensus 199 l~~lephd-G----~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~ 273 (1165)
+..+.... | ..+.+++| +|+ +++|++++..+.+|++|++... ..+++++++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~--spd---G~~l~v~~~~~~~v~v~~~~~~---------g~~~~~~~~~~-------- 283 (347)
T 3hfq_A 226 LGIVKTIPADYTAHNGAAAIRL--SHD---GHFLYVSNRGYNTLAVFAVTAD---------GHLTLIQQIST-------- 283 (347)
T ss_dssp EEEEESSCTTCCSCCEEEEEEE--CTT---SCEEEEEEETTTEEEEEEECGG---------GCEEEEEEEEC--------
T ss_pred eeeeeecCCCCCCCCcceeEEE--CCC---CCEEEEEeCCCCEEEEEEECCC---------CcEEEeEEEec--------
Confidence 33433322 1 46889999 455 4557677888999999998532 13577777774
Q ss_pred ccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 274 EEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 274 ~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
+......++++|++++|++++...+.|+.+.++.
T Consensus 284 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 284 EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 2344558899999999999999988888887764
No 149
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.11 E-value=3.9e-05 Score=82.24 Aligned_cols=130 Identities=12% Similarity=0.165 Sum_probs=90.3
Q ss_pred EeeecCceEEEeec-CC--cEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCC
Q 001070 152 QIAVNKHYVCYGLK-GG--NVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 152 ~IAVn~~yIayG~k-dg--~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~leph 205 (1165)
.++-||++|+|+.. +| +|++||+.+ ..+.+..||.. |++||..+|.....++.+
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~ 121 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVP 121 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeech
Confidence 36778999999887 67 599999998 77778888864 889999998876667655
Q ss_pred CCCCcceeEeecCCCCCCceEEEe---------------------ecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEe
Q 001070 206 GGQPVNSAQYLTAPNQAGHIILVT---------------------AGPLNREVKLWASASEEGWSLPTHAESWKCTQTLD 264 (1165)
Q Consensus 206 dG~sV~SVaFl~aP~~~d~~~lvt---------------------sGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe 264 (1165)
. ..+....|.-.|++. +++. .+..+..|.+||++++ +..+...
T Consensus 122 ~-~~~~~~~~~~~~dg~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g------------~~~~l~~ 185 (388)
T 3pe7_A 122 A-EWVGYGTWVANSDCT---KLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG------------ESTVILQ 185 (388)
T ss_dssp T-TEEEEEEEEECTTSS---EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC------------CEEEEEE
T ss_pred h-hcccccceeECCCCC---eeccccccCcccccccccchhhhhhccCCcceEEEEECCCC------------ceEEeec
Confidence 3 356556664455553 2431 1345678999998654 3333332
Q ss_pred ccCCCCCccccccEEEEEeec-CCcEEEEeccC-----CCcEEEEEee
Q 001070 265 LKSSAKPRVEEAFFNQVVVLS-QAGLLLFANAK-----KNAIYSVHLG 306 (1165)
Q Consensus 265 ~~~s~~~~~~~aff~sV~~~p-~a~~ilLan~~-----r~aIYalhl~ 306 (1165)
+...+..+.++| ++++|+.+... ...||.+.++
T Consensus 186 ---------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (388)
T 3pe7_A 186 ---------ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED 224 (388)
T ss_dssp ---------ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT
T ss_pred ---------CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC
Confidence 345677899999 99977665443 4589988765
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.09 E-value=5.6e-05 Score=75.99 Aligned_cols=130 Identities=8% Similarity=0.056 Sum_probs=85.0
Q ss_pred eeecCceEEEee--cCCcEEEEeC--cchhhHhhcCCcc----------------------EEEeecC-CCceeEEecCC
Q 001070 153 IAVNKHYVCYGL--KGGNVRVLNL--NTATRSLLRGHTK----------------------IKIWEDS-KVAPLIILKPH 205 (1165)
Q Consensus 153 IAVn~~yIayG~--kdg~IRVwdi--~t~ir~llrGH~q----------------------VriWD~~-~g~pl~~leph 205 (1165)
++-||++|+++. .++.++||++ .+.....+..|.. ++||+.. .+..+..+..|
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence 556899999998 4456666655 4433333444433 6888853 23335556555
Q ss_pred CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeec
Q 001070 206 GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS 285 (1165)
Q Consensus 206 dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p 285 (1165)
. ..+.+++| +|++ .+|+.++..+.+++||++... ..+..++.. +...+..++++|
T Consensus 172 ~-~~~~~~~~--s~dg---~~l~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~--------~~~~~~~~~~s~ 226 (297)
T 2ojh_A 172 E-GRNDGPDY--SPDG---RWIYFNSSRTGQMQIWRVRVD-----------GSSVERITD--------SAYGDWFPHPSP 226 (297)
T ss_dssp S-SCEEEEEE--CTTS---SEEEEEECTTSSCEEEEEETT-----------SSCEEECCC--------CSEEEEEEEECT
T ss_pred C-CccccceE--CCCC---CEEEEEecCCCCccEEEECCC-----------CCCcEEEec--------CCcccCCeEECC
Confidence 3 48899999 4554 447777777899999998543 134555542 345666789999
Q ss_pred CCcEEEEeccC----------CCcEEEEEeec
Q 001070 286 QAGLLLFANAK----------KNAIYSVHLGY 307 (1165)
Q Consensus 286 ~a~~ilLan~~----------r~aIYalhl~~ 307 (1165)
++.+|+.+... ...||.+.+.-
T Consensus 227 dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 227 SGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp TSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred CCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 99988877664 35688877654
No 151
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.08 E-value=3e-05 Score=78.03 Aligned_cols=126 Identities=12% Similarity=0.160 Sum_probs=83.2
Q ss_pred eeecCceEEEeecCCcEEEEeCcc--hhhHhhcCCcc-------------------------EEEeec--CCCceeEEec
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT--ATRSLLRGHTK-------------------------IKIWED--SKVAPLIILK 203 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t--~ir~llrGH~q-------------------------VriWD~--~~g~pl~~le 203 (1165)
++-||+||+++. ++.|+|||+.+ ..+.++.+|.. ++||+. .++. +..+.
T Consensus 49 ~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~ 126 (297)
T 2ojh_A 49 WSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT 126 (297)
T ss_dssp ECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC
T ss_pred ECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee
Confidence 445799999986 88999999987 45557777742 345544 4444 55555
Q ss_pred CCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEe
Q 001070 204 PHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVV 283 (1165)
Q Consensus 204 phdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~ 283 (1165)
.+ ..+++++| +|++ ++|+.++..+++++||++....+ . ...+. .+...+..++.
T Consensus 127 ~~--~~~~~~~~--spdg---~~l~~~~~~~~~~~l~~~~~~~~----------~-~~~~~--------~~~~~~~~~~~ 180 (297)
T 2ojh_A 127 KN--LPSYWHGW--SPDG---KSFTYCGIRDQVFDIYSMDIDSG----------V-ETRLT--------HGEGRNDGPDY 180 (297)
T ss_dssp SS--SSEEEEEE--CTTS---SEEEEEEEETTEEEEEEEETTTC----------C-EEECC--------CSSSCEEEEEE
T ss_pred cC--CCccceEE--CCCC---CEEEEEECCCCceEEEEEECCCC----------c-ceEcc--------cCCCccccceE
Confidence 44 35899999 4554 44665677889999999754321 2 22332 23456678899
Q ss_pred ecCCcEEEEecc--CCCcEEEEEee
Q 001070 284 LSQAGLLLFANA--KKNAIYSVHLG 306 (1165)
Q Consensus 284 ~p~a~~ilLan~--~r~aIYalhl~ 306 (1165)
+|++.+|+++.. ....||.+.+.
T Consensus 181 s~dg~~l~~~~~~~~~~~i~~~~~~ 205 (297)
T 2ojh_A 181 SPDGRWIYFNSSRTGQMQIWRVRVD 205 (297)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCCCCEEEEEecCCCCccEEEECCC
Confidence 999998887653 44556665543
No 152
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.08 E-value=5.4e-06 Score=97.62 Aligned_cols=124 Identities=11% Similarity=0.062 Sum_probs=80.9
Q ss_pred eeecCceEEEeec-CC-----cEEEEeCcc-hhhHhhcCC--c----------------------c--------------
Q 001070 153 IAVNKHYVCYGLK-GG-----NVRVLNLNT-ATRSLLRGH--T----------------------K-------------- 187 (1165)
Q Consensus 153 IAVn~~yIayG~k-dg-----~IRVwdi~t-~ir~llrGH--~----------------------q-------------- 187 (1165)
++-||+||+|+.. || .|++||+++ ..+.++.+| . .
T Consensus 44 ~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l 123 (741)
T 2ecf_A 44 VAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRL 123 (741)
T ss_dssp ECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEE
T ss_pred EecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEE
Confidence 4558999999998 88 999999998 555555443 1 1
Q ss_pred -------EEEeecCCCc--eeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcc
Q 001070 188 -------IKIWEDSKVA--PLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWK 258 (1165)
Q Consensus 188 -------VriWD~~~g~--pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~ 258 (1165)
|++||..++. .+..+..|+ ..|.+++| +||| +.|+.+ + +++|.+|++.++ +
T Consensus 124 ~~~~~~~i~~~d~~~~~~~~~~~l~~~~-~~~~~~~~--SPDG---~~la~~-~-~~~i~~~d~~~g------------~ 183 (741)
T 2ecf_A 124 LFPLGGELYLYDLKQEGKAAVRQLTHGE-GFATDAKL--SPKG---GFVSFI-R-GRNLWVIDLASG------------R 183 (741)
T ss_dssp EEEETTEEEEEESSSCSTTSCCBCCCSS-SCEEEEEE--CTTS---SEEEEE-E-TTEEEEEETTTT------------E
T ss_pred EEEeCCcEEEEECCCCCcceEEEcccCC-cccccccC--CCCC---CEEEEE-e-CCcEEEEecCCC------------C
Confidence 8999999882 356676663 47999999 4655 435543 3 469999998654 4
Q ss_pred eEEEEeccCCCCCccccc--------cEEEEEeecCCcEEEEeccC
Q 001070 259 CTQTLDLKSSAKPRVEEA--------FFNQVVVLSQAGLLLFANAK 296 (1165)
Q Consensus 259 C~QTLe~~~s~~~~~~~a--------ff~sV~~~p~a~~ilLan~~ 296 (1165)
|.+...........+..+ .+..++.+||+++|+.+...
T Consensus 184 ~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d 229 (741)
T 2ecf_A 184 QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARID 229 (741)
T ss_dssp EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEE
T ss_pred EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEc
Confidence 544333211000000001 13568899999998887543
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.01 E-value=3.5e-05 Score=80.54 Aligned_cols=59 Identities=8% Similarity=0.042 Sum_probs=42.7
Q ss_pred CceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEE
Q 001070 223 GHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYS 302 (1165)
Q Consensus 223 d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYa 302 (1165)
++++++++ +.+|.+||+.++ ++++++... .....++++|++++|++++.. +.|++
T Consensus 266 dg~~l~~~---~~~v~~~d~~~~------------~~~~~~~~~---------~~~~~~~~s~dg~~l~~~~~~-~~v~v 320 (349)
T 1jmx_B 266 DPNQIYGV---LNRLAKYDLKQR------------KLIKAANLD---------HTYYCVAFDKKGDKLYLGGTF-NDLAV 320 (349)
T ss_dssp CTTEEEEE---ESEEEEEETTTT------------EEEEEEECS---------SCCCEEEECSSSSCEEEESBS-SEEEE
T ss_pred CCCEEEEE---cCeEEEEECccC------------eEEEEEcCC---------CCccceEECCCCCEEEEecCC-CeEEE
Confidence 44556654 789999998543 788888742 123478999999999887544 88888
Q ss_pred EEee
Q 001070 303 VHLG 306 (1165)
Q Consensus 303 lhl~ 306 (1165)
+.+.
T Consensus 321 ~d~~ 324 (349)
T 1jmx_B 321 FNPD 324 (349)
T ss_dssp EETT
T ss_pred Eecc
Confidence 8765
No 154
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.97 E-value=3.4e-05 Score=90.41 Aligned_cols=136 Identities=10% Similarity=0.084 Sum_probs=84.9
Q ss_pred eeecCceEEEeecC---------CcEEEEeCcc-hhhHh--hcCCcc---------------------EEEeecCCCcee
Q 001070 153 IAVNKHYVCYGLKG---------GNVRVLNLNT-ATRSL--LRGHTK---------------------IKIWEDSKVAPL 199 (1165)
Q Consensus 153 IAVn~~yIayG~kd---------g~IRVwdi~t-~ir~l--lrGH~q---------------------VriWD~~~g~pl 199 (1165)
++-||+||+|+..+ +.|+|||+.+ ..+.+ ..+|.. |++||..+|...
T Consensus 68 ~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~ 147 (723)
T 1xfd_A 68 ISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAI 147 (723)
T ss_dssp ECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCE
T ss_pred ECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceE
Confidence 55589999999875 7888999998 43322 234432 999999998876
Q ss_pred EEecCCCCC-----------------CcceeEeecCCCCCCceEEEeecCCCc---------------------------
Q 001070 200 IILKPHGGQ-----------------PVNSAQYLTAPNQAGHIILVTAGPLNR--------------------------- 235 (1165)
Q Consensus 200 ~~lephdG~-----------------sV~SVaFl~aP~~~d~~~lvtsGslnr--------------------------- 235 (1165)
.....+.+. .+.+++| +||| +.|+.+...+.
T Consensus 148 ~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~--SpDg---~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 222 (723)
T 1xfd_A 148 RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWW--SPDG---TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAG 222 (723)
T ss_dssp EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEE--CTTS---SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTT
T ss_pred EEecCCCCCceECcccceeEEEEeccCcceEEE--CCCC---CEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCC
Confidence 666543211 2368999 4655 44665432222
Q ss_pred ------eEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccC---CCcEEEEEee
Q 001070 236 ------EVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAK---KNAIYSVHLG 306 (1165)
Q Consensus 236 ------tIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~---r~aIYalhl~ 306 (1165)
+|++||++++ +|..+|..+. ....+...+..++.+||+++|+.+..+ ...||.+.+.
T Consensus 223 ~~~~~~~l~~~d~~~~------------~~~~~l~~~~--~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 288 (723)
T 1xfd_A 223 SENPSISLHVIGLNGP------------THDLEMMPPD--DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT 288 (723)
T ss_dssp SCCCEEEEEEEESSSS------------CCCEECCCCC--CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETT
T ss_pred CCCCeeEEEEEECCCC------------ceeEEeeCCc--cCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCC
Confidence 6666666443 4555555321 111235677889999999988665433 3467776655
Q ss_pred c
Q 001070 307 Y 307 (1165)
Q Consensus 307 ~ 307 (1165)
-
T Consensus 289 ~ 289 (723)
T 1xfd_A 289 T 289 (723)
T ss_dssp T
T ss_pred C
Confidence 3
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.89 E-value=4.4e-05 Score=95.15 Aligned_cols=112 Identities=11% Similarity=0.115 Sum_probs=81.3
Q ss_pred cCceEEEeecCCcEE-EEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCCCCCCcc
Q 001070 156 NKHYVCYGLKGGNVR-VLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPHGGQPVN 211 (1165)
Q Consensus 156 n~~yIayG~kdg~IR-Vwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~lephdG~sV~ 211 (1165)
||++|+|+..++.|+ +||+.+ ..+.+. +|.. |++||..+|.....++.|.| .|+
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~-~v~ 424 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA-MIT 424 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS-CCC
T ss_pred CCCeEEEEECCCceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC-Ccc
Confidence 778899988888999 999988 555554 7754 99999999988777777754 799
Q ss_pred eeEeecCCCCCCceEEEeecC---------CCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEE
Q 001070 212 SAQYLTAPNQAGHIILVTAGP---------LNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVV 282 (1165)
Q Consensus 212 SVaFl~aP~~~d~~~lvtsGs---------lnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~ 282 (1165)
+++| +||| ++|++++. .+.+|++||++++ + ..+|.. +......++
T Consensus 425 ~~~~--SpDG---~~la~~~~~~~~~~~~~~~~~i~l~d~~~g------------~-~~~l~~--------~~~~~~~~~ 478 (1045)
T 1k32_A 425 DFTI--SDNS---RFIAYGFPLKHGETDGYVMQAIHVYDMEGR------------K-IFAATT--------ENSHDYAPA 478 (1045)
T ss_dssp CEEE--CTTS---CEEEEEEEECSSTTCSCCEEEEEEEETTTT------------E-EEECSC--------SSSBEEEEE
T ss_pred ceEE--CCCC---CeEEEEecCccccccCCCCCeEEEEECCCC------------c-EEEeeC--------CCcccCCce
Confidence 9999 4555 54665543 2469999998554 3 334432 334455788
Q ss_pred eecCCcEEEEecc
Q 001070 283 VLSQAGLLLFANA 295 (1165)
Q Consensus 283 ~~p~a~~ilLan~ 295 (1165)
.+|++++|+.+..
T Consensus 479 ~spdG~~l~~~s~ 491 (1045)
T 1k32_A 479 FDADSKNLYYLSY 491 (1045)
T ss_dssp ECTTSCEEEEEES
T ss_pred EcCCCCEEEEEec
Confidence 9999997766543
No 156
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.86 E-value=3.9e-05 Score=90.41 Aligned_cols=129 Identities=12% Similarity=0.141 Sum_probs=86.5
Q ss_pred eeecCceEEEeecCCcEEEEeCcch---hhHhhcCCcc---------------------EEEeecCCCceeEEecCCCCC
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNTA---TRSLLRGHTK---------------------IKIWEDSKVAPLIILKPHGGQ 208 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t~---ir~llrGH~q---------------------VriWD~~~g~pl~~lephdG~ 208 (1165)
++-||+||+++.. +.|+|||+.+. ....|.+|.. |++||..+|........+.+.
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~ 194 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTT 194 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCccc
Confidence 5568999999887 99999999985 5556677754 999999988765554433211
Q ss_pred ---------------CcceeEeecCCCCCCceEEEeecCCCc---------------------------------eEEEe
Q 001070 209 ---------------PVNSAQYLTAPNQAGHIILVTAGPLNR---------------------------------EVKLW 240 (1165)
Q Consensus 209 ---------------sV~SVaFl~aP~~~d~~~lvtsGslnr---------------------------------tIKLW 240 (1165)
.+.+++| +|||.. |+++. .|. +|.+|
T Consensus 195 ~~~g~~~~v~~~~~~~~~~~~~--SpDg~~---l~~~~-~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 195 IGNGIAEFVADEEMDRHTGYWW--APDDSA---IAYAR-IDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp EEESCCCHHHHHHSCCCCSEEE--CTTSSC---EEEEE-EECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred eeccccceeeeeccccccceEE--CCCCCE---EEEEE-EcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 1588999 566643 55432 222 67777
Q ss_pred EccC-cCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEecc----CCCcEEEEEeec
Q 001070 241 ASAS-EEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANA----KKNAIYSVHLGY 307 (1165)
Q Consensus 241 ~~a~-~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~----~r~aIYalhl~~ 307 (1165)
|+.+ + +|.+.... ..+...+..++. |++.+|+++.. ....||.+.+.-
T Consensus 269 d~~~~~------------~~~~~~~~------~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~ 321 (741)
T 2ecf_A 269 SPAEQA------------QTQWIDLG------KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS 321 (741)
T ss_dssp CSSTTC------------CCEEECCC------SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT
T ss_pred ECCCCC------------ceEEecCC------CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC
Confidence 7654 3 44443321 135678889999 99999988755 345677776654
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.81 E-value=2.6e-05 Score=91.94 Aligned_cols=135 Identities=11% Similarity=0.115 Sum_probs=79.0
Q ss_pred eeecCceEEEeec---------CCcEEEEeCcc-hh---hHhhcCCcc------------------EEEeecCCCceeEE
Q 001070 153 IAVNKHYVCYGLK---------GGNVRVLNLNT-AT---RSLLRGHTK------------------IKIWEDSKVAPLII 201 (1165)
Q Consensus 153 IAVn~~yIayG~k---------dg~IRVwdi~t-~i---r~llrGH~q------------------VriWD~~~g~pl~~ 201 (1165)
++-||+||+++.. ++.|+|||+++ .. +.+ .+.-. |+|||..+|.+...
T Consensus 67 ~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l 145 (719)
T 1z68_A 67 LSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQI 145 (719)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEEC
T ss_pred ECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEE
Confidence 5558999999876 79999999998 43 333 22111 99999998875443
Q ss_pred ec-CCC-----CC--Cc---------ceeEeecCCCCCCceEEEeecCCC------------------------------
Q 001070 202 LK-PHG-----GQ--PV---------NSAQYLTAPNQAGHIILVTAGPLN------------------------------ 234 (1165)
Q Consensus 202 le-phd-----G~--sV---------~SVaFl~aP~~~d~~~lvtsGsln------------------------------ 234 (1165)
.. ++. |+ +| .+++| +||| ++|+.+...+
T Consensus 146 ~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w--SPDG---~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~ 220 (719)
T 1z68_A 146 TFNGRENKIFNGIPDWVYEEEMLATKYALWW--SPNG---KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAK 220 (719)
T ss_dssp CCCCBTTTEEESSCCHHHHHHTTCSSCCEEE--CTTS---SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSC
T ss_pred ecCCCcCCeEcccccceeeeecccCcccEEE--CCCC---CEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCC
Confidence 21 211 11 22 48999 4555 4455433211
Q ss_pred ---ceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCC---CcEEEEEe
Q 001070 235 ---REVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKK---NAIYSVHL 305 (1165)
Q Consensus 235 ---rtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r---~aIYalhl 305 (1165)
.+|++||++++ +|+.++.+.......++..++..++.+||+.+++.+..+. ..||.+.+
T Consensus 221 ~~~~~l~~~d~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~ 285 (719)
T 1z68_A 221 NPVVRIFIIDTTYP------------AYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDF 285 (719)
T ss_dssp CCEEEEEEEESSCH------------HHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEE
T ss_pred CCeeEEEEEECCCC------------CccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcc
Confidence 27888887654 4432222211111114667888999999976555533222 34777773
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.81 E-value=2.6e-05 Score=89.95 Aligned_cols=118 Identities=11% Similarity=0.044 Sum_probs=84.6
Q ss_pred eeecCceEEEeecC----CcEEEEeCcc-hhhHhhcCCcc------------------------EEEeecCCCceeEEec
Q 001070 153 IAVNKHYVCYGLKG----GNVRVLNLNT-ATRSLLRGHTK------------------------IKIWEDSKVAPLIILK 203 (1165)
Q Consensus 153 IAVn~~yIayG~kd----g~IRVwdi~t-~ir~llrGH~q------------------------VriWD~~~g~pl~~le 203 (1165)
++.||++|+++..+ +.|++||+.+ ..+ .|.+|.. |++||..+|.+. .+.
T Consensus 157 ~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~ 234 (582)
T 3o4h_A 157 SDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE 234 (582)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC
T ss_pred ECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc
Confidence 56789999998887 8899999988 544 5677765 899999988876 777
Q ss_pred CCCCCCcceeE--------eecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcccc
Q 001070 204 PHGGQPVNSAQ--------YLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEE 275 (1165)
Q Consensus 204 phdG~sV~SVa--------Fl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~ 275 (1165)
.|++ .|.+++ | +||| + ++.+++.|.+++||++ + +|++++.
T Consensus 235 ~~~~-~~~~~~~~~~~~~~~--spdg---~-~~~~~~~~g~~~l~~~--g------------~~~~~~~----------- 282 (582)
T 3o4h_A 235 LPSK-DFSSYRPTAITWLGY--LPDG---R-LAVVARREGRSAVFID--G------------ERVEAPQ----------- 282 (582)
T ss_dssp CSCS-HHHHHCCSEEEEEEE--CTTS---C-EEEEEEETTEEEEEET--T------------EEECCCS-----------
T ss_pred CCCc-ChhhhhhccccceeE--cCCC---c-EEEEEEcCCcEEEEEE--C------------CeeccCC-----------
Confidence 7654 788888 8 5666 3 5556888999999997 2 4544222
Q ss_pred ccEEEEEeecCCcEEEEecc--CCCcEEEEEe
Q 001070 276 AFFNQVVVLSQAGLLLFANA--KKNAIYSVHL 305 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~--~r~aIYalhl 305 (1165)
..+..++++ ++.+++.+.. ....||.+.+
T Consensus 283 ~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 283 GNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp SEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred CceEEEEec-CCEEEEEEcCCCCCCeEEEEcC
Confidence 235577788 8887766433 2345676643
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.80 E-value=3.3e-05 Score=92.64 Aligned_cols=82 Identities=16% Similarity=0.160 Sum_probs=61.8
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc------------------------------------EEEeecCC
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK------------------------------------IKIWEDSK 195 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q------------------------------------VriWD~~~ 195 (1165)
..-||+||+++ ||.|++||+.+ ..+.+|.||.. +.|||..+
T Consensus 24 w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~ 101 (740)
T 4a5s_A 24 WISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK 101 (740)
T ss_dssp ECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCC
Confidence 44478999997 99999999998 65668888862 35999999
Q ss_pred CceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCc
Q 001070 196 VAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASE 245 (1165)
Q Consensus 196 g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~ 245 (1165)
|. +.++..|.| .+.+++| +|||.- |+ .+ .|++|.+|++.++
T Consensus 102 ~~-~~~l~~~~~-~~~~~~~--SPdG~~---la-~~-~~~~i~~~~~~~~ 142 (740)
T 4a5s_A 102 RQ-LITEERIPN-NTQWVTW--SPVGHK---LA-YV-WNNDIYVKIEPNL 142 (740)
T ss_dssp TE-ECCSSCCCT-TEEEEEE--CSSTTC---EE-EE-ETTEEEEESSTTS
T ss_pred Cc-EEEcccCCC-cceeeEE--CCCCCE---EE-EE-ECCeEEEEECCCC
Confidence 87 445666543 7999999 577654 44 33 4689999998665
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.78 E-value=7.7e-05 Score=85.99 Aligned_cols=125 Identities=13% Similarity=0.044 Sum_probs=80.4
Q ss_pred eeecCceEEEeec-CCcEEEEeCcc-hhhHhhcCCcc------------------------EEEeecCC---CceeEEec
Q 001070 153 IAVNKHYVCYGLK-GGNVRVLNLNT-ATRSLLRGHTK------------------------IKIWEDSK---VAPLIILK 203 (1165)
Q Consensus 153 IAVn~~yIayG~k-dg~IRVwdi~t-~ir~llrGH~q------------------------VriWD~~~---g~pl~~le 203 (1165)
++.||++|||+.. ||.++||++++ ..+.|..+|.. .+||++.. |... .+.
T Consensus 29 ~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~ 107 (582)
T 3o4h_A 29 GVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLE 107 (582)
T ss_dssp EEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCE-ECT
T ss_pred cCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccc-ccc
Confidence 5679999999887 99999999987 55556655532 24443322 2222 444
Q ss_pred CCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEe
Q 001070 204 PHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVV 283 (1165)
Q Consensus 204 phdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~ 283 (1165)
.+.|. ...+| +|++.. + ++++++.|+.+ ||+++++ +|.+.... + . .++++
T Consensus 108 ~~~~~--~~~~~--s~dg~~-~-~~~s~~~~~~~-l~d~~~g------------~~~~l~~~--------~-~--~~~~~ 157 (582)
T 3o4h_A 108 AVKPM--RILSG--VDTGEA-V-VFTGATEDRVA-LYALDGG------------GLRELARL--------P-G--FGFVS 157 (582)
T ss_dssp TSCSB--EEEEE--EECSSC-E-EEEEECSSCEE-EEEEETT------------EEEEEEEE--------S-S--CEEEE
T ss_pred CCCCc--eeeee--CCCCCe-E-EEEecCCCCce-EEEccCC------------cEEEeecC--------C-C--ceEEE
Confidence 44443 34466 455533 4 45567777666 9998654 67666653 1 2 58899
Q ss_pred ecCCcEEEEeccC---CCcEEEEEeecC
Q 001070 284 LSQAGLLLFANAK---KNAIYSVHLGYG 308 (1165)
Q Consensus 284 ~p~a~~ilLan~~---r~aIYalhl~~g 308 (1165)
+||+++|+.+... ...||.+.++-|
T Consensus 158 spDG~~la~~~~~~~~~~~i~~~d~~~g 185 (582)
T 3o4h_A 158 DIRGDLIAGLGFFGGGRVSLFTSNLSSG 185 (582)
T ss_dssp EEETTEEEEEEEEETTEEEEEEEETTTC
T ss_pred CCCCCEEEEEEEcCCCCeEEEEEcCCCC
Confidence 9999999855443 255888887643
No 161
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.75 E-value=8.2e-05 Score=92.77 Aligned_cols=125 Identities=10% Similarity=0.052 Sum_probs=90.4
Q ss_pred ee-ecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc----------------------EE-EeecCCCceeEEecCCCC
Q 001070 153 IA-VNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK----------------------IK-IWEDSKVAPLIILKPHGG 207 (1165)
Q Consensus 153 IA-Vn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q----------------------Vr-iWD~~~g~pl~~lephdG 207 (1165)
++ -||++|+++. ++.|++||..+ ..+. +.+|.. |. +||..++. +..+.+| +
T Consensus 303 ~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~-~~~l~~~-~ 378 (1045)
T 1k32_A 303 FSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK-AEKFEEN-L 378 (1045)
T ss_dssp EEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC-EEECCCC-C
T ss_pred ecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCC-ceEecCC-c
Confidence 56 7899999988 89999999987 4333 344432 55 66887766 4455555 4
Q ss_pred CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCC
Q 001070 208 QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQA 287 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a 287 (1165)
..|.+++| +|+| ++|+ .++.+++|++||++++ +|...++. |...+..++.+|++
T Consensus 379 ~~~~~~~~--SpDG---~~la-~~~~~~~v~~~d~~tg------------~~~~~~~~--------~~~~v~~~~~SpDG 432 (1045)
T 1k32_A 379 GNVFAMGV--DRNG---KFAV-VANDRFEIMTVDLETG------------KPTVIERS--------REAMITDFTISDNS 432 (1045)
T ss_dssp CSEEEEEE--CTTS---SEEE-EEETTSEEEEEETTTC------------CEEEEEEC--------SSSCCCCEEECTTS
T ss_pred cceeeeEE--CCCC---CEEE-EECCCCeEEEEECCCC------------ceEEeccC--------CCCCccceEECCCC
Confidence 58999999 4554 5455 4667889999998654 77777763 45566788999999
Q ss_pred cEEEEeccCC---------CcEEEEEeec
Q 001070 288 GLLLFANAKK---------NAIYSVHLGY 307 (1165)
Q Consensus 288 ~~ilLan~~r---------~aIYalhl~~ 307 (1165)
++|+.+.... +.||.+.+.-
T Consensus 433 ~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 433 RFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp CEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred CeEEEEecCccccccCCCCCeEEEEECCC
Confidence 9998876544 5788887653
No 162
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.70 E-value=0.00011 Score=86.10 Aligned_cols=127 Identities=12% Similarity=0.109 Sum_probs=83.9
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc---------------------EEEeecCC-----CceeEEecCCCCC
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK---------------------IKIWEDSK-----VAPLIILKPHGGQ 208 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q---------------------VriWD~~~-----g~pl~~lephdG~ 208 (1165)
| ++|+++. ++.|+|||+.+ ..+.+. +|.. |+|||..+ |........+.+.
T Consensus 92 d-~~~~~~~-~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~ 168 (706)
T 2z3z_A 92 R-GLVVLFT-QGGLVGFDMLARKVTYLF-DTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTET 168 (706)
T ss_dssp T-TEEEEEE-TTEEEEEETTTTEEEEEE-CCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTT
T ss_pred C-CeEEEEE-CCEEEEEECCCCceEEcc-CCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCC
Confidence 5 6777774 59999999998 444443 3332 99999998 8766555443221
Q ss_pred -------------CcceeEeecCCCCCCceEEEeec--------------------------------CCCceEEEeEcc
Q 001070 209 -------------PVNSAQYLTAPNQAGHIILVTAG--------------------------------PLNREVKLWASA 243 (1165)
Q Consensus 209 -------------sV~SVaFl~aP~~~d~~~lvtsG--------------------------------slnrtIKLW~~a 243 (1165)
.+.+++| +||| ++|+++. ..+.+|++||++
T Consensus 169 ~~~g~~~~~ee~~~~~~~~~--SpDg---~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~ 243 (706)
T 2z3z_A 169 LVYGQAVHQREFGIEKGTFW--SPKG---SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLA 243 (706)
T ss_dssp EEESSCCGGGCTTCCCSEEE--CTTS---SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETT
T ss_pred eEcccchhhhhcCCCceEEE--CCCC---CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECC
Confidence 1589999 4555 4466543 245789999986
Q ss_pred CcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCC----CcEEEEEeecC
Q 001070 244 SEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKK----NAIYSVHLGYG 308 (1165)
Q Consensus 244 ~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r----~aIYalhl~~g 308 (1165)
++ ++.+.... ..++.++..++.+|++++|+++...+ ..||.+.+.-|
T Consensus 244 ~~------------~~~~~~~~------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 244 TG------------KTVYLQTG------EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp TT------------EEEECCCC------SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred CC------------ceEeeccC------CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 54 44443321 13567788999999999988865544 46777766543
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.68 E-value=0.00053 Score=74.59 Aligned_cols=103 Identities=7% Similarity=0.001 Sum_probs=68.1
Q ss_pred EEEeecC-CCce--eEEecCC-CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceE---
Q 001070 188 IKIWEDS-KVAP--LIILKPH-GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCT--- 260 (1165)
Q Consensus 188 VriWD~~-~g~p--l~~leph-dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~--- 260 (1165)
|++||.. +|.. +..+... .|..+.+++| +|+| ++|++++..+.+|.+|+.....| ++.
T Consensus 169 v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~--spdg---~~l~v~~~~~~~v~v~~~~~~~g----------~~~~~~ 233 (365)
T 1jof_A 169 LWTHRKLASGEVELVGSVDAPDPGDHPRWVAM--HPTG---NYLYALMEAGNRICEYVIDPATH----------MPVYTH 233 (365)
T ss_dssp EEEEEECTTSCEEEEEEEECSSTTCCEEEEEE--CTTS---SEEEEEETTTTEEEEEEECTTTC----------CEEEEE
T ss_pred EEEEEECCCCCEEEeeeEecCCCCCCCCEeEE--CCCC---CEEEEEECCCCeEEEEEEeCCCC----------cEEEcc
Confidence 9999998 6753 3344322 2667999999 4554 55777788889999999754322 342
Q ss_pred EEEeccCCCCCccccc------cEEEEE-eecCCcEEEEeccCCC-----cEEEEEee
Q 001070 261 QTLDLKSSAKPRVEEA------FFNQVV-VLSQAGLLLFANAKKN-----AIYSVHLG 306 (1165)
Q Consensus 261 QTLe~~~s~~~~~~~a------ff~sV~-~~p~a~~ilLan~~r~-----aIYalhl~ 306 (1165)
+++..-+.. ..++.. ....++ ++|++++|+++|...+ .|+++.+.
T Consensus 234 ~~~~~~~~~-~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 234 HSFPLIPPG-IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEEESSCTT-CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred ceEEcCCCC-cCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 333321111 012222 567889 9999999999998776 78888776
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.63 E-value=0.00044 Score=74.42 Aligned_cols=134 Identities=10% Similarity=0.086 Sum_probs=94.1
Q ss_pred ccEeeec---CceEEEee-cCCcEEEEeCcchhhHhhcC----------Ccc-----------------------EEEee
Q 001070 150 GRQIAVN---KHYVCYGL-KGGNVRVLNLNTATRSLLRG----------HTK-----------------------IKIWE 192 (1165)
Q Consensus 150 GR~IAVn---~~yIayG~-kdg~IRVwdi~t~ir~llrG----------H~q-----------------------VriWD 192 (1165)
-+.||++ |..+++.. .++.|++||.+..+...+.+ +-. |++||
T Consensus 145 P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~ 224 (329)
T 3fvz_A 145 PTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFK 224 (329)
T ss_dssp EEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEE
Confidence 3458885 56666665 69999999976644443321 111 99999
Q ss_pred cCCCceeEEecCC-CCCCcceeEeecCCCCCCceEEEe------ecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEec
Q 001070 193 DSKVAPLIILKPH-GGQPVNSAQYLTAPNQAGHIILVT------AGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDL 265 (1165)
Q Consensus 193 ~~~g~pl~~leph-dG~sV~SVaFl~aP~~~d~~~lvt------sGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~ 265 (1165)
..+|..+.++... .|..+++++|. | +..+++ ++..+.+|++|+...+ +++.++..
T Consensus 225 ~~~G~~~~~~~~~~~~~~~~~~~~~--p----g~~~~~~g~~~v~~~~~~~v~~~~~~~g------------~~~~~~~~ 286 (329)
T 3fvz_A 225 TDTKEFVREIKHASFGRNVFAISYI--P----GFLFAVNGKPYFGDQEPVQGFVMNFSSG------------EIIDVFKP 286 (329)
T ss_dssp TTTCCEEEEECCTTTTTCEEEEEEE--T----TEEEEEECCCCTTCSCCCCEEEEETTTC------------CEEEEECC
T ss_pred CCCCcEEEEEeccccCCCcceeeec--C----CEEEEeCCCEEeccCCCcEEEEEEcCCC------------eEEEEEcC
Confidence 9888888888533 36689999994 5 122222 3456679999998544 78888752
Q ss_pred cCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 266 KSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 266 ~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
. .++-.....|+++|++ .|+++|...+.|+.+.+.-
T Consensus 287 ~-----~~~~~~p~~ia~~~dG-~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 287 V-----RKHFDMPHDIVASEDG-TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp S-----SSCCSSEEEEEECTTS-EEEEEESSSCCEEEEEEEE
T ss_pred C-----CCccCCeeEEEECCCC-CEEEEECCCCEEEEEeCCc
Confidence 1 1234566789999998 8999999999999998874
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.59 E-value=0.00056 Score=74.40 Aligned_cols=133 Identities=9% Similarity=0.029 Sum_probs=86.8
Q ss_pred eee--cCceEEEeecCCcEEEEeCc-c-hhhH-----------------------hhcC--------------Ccc-EEE
Q 001070 153 IAV--NKHYVCYGLKGGNVRVLNLN-T-ATRS-----------------------LLRG--------------HTK-IKI 190 (1165)
Q Consensus 153 IAV--n~~yIayG~kdg~IRVwdi~-t-~ir~-----------------------llrG--------------H~q-Vri 190 (1165)
+|+ ||+||+++.++ .|++||++ + .+.. ++.+ +.. |++
T Consensus 45 ~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 45 MTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence 554 68999888887 99999986 3 2211 1111 122 788
Q ss_pred eecC-CCceeEEecC--C-CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEcc-CcCCCCCCCCCCCcceEEEEec
Q 001070 191 WEDS-KVAPLIILKP--H-GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASA-SEEGWSLPTHAESWKCTQTLDL 265 (1165)
Q Consensus 191 WD~~-~g~pl~~lep--h-dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a-~~~~~~~~~~~~~w~C~QTLe~ 265 (1165)
|+.. +|.....+.. | .|..+.+++| +|+| ++|+++...+.+|++|+++ .+ ....+.++.+
T Consensus 124 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--spdG---~~l~~~~~~~~~v~~~~~~~~g----------~~~~~~~~~~ 188 (365)
T 1jof_A 124 FSVSETGKLEKNVQNYEYQENTGIHGMVF--DPTE---TYLYSADLTANKLWTHRKLASG----------EVELVGSVDA 188 (365)
T ss_dssp EEECTTCCEEEEEEEEECCTTCCEEEEEE--CTTS---SEEEEEETTTTEEEEEEECTTS----------CEEEEEEEEC
T ss_pred EccCCCCcCcceEeeEEeCCCCcceEEEE--CCCC---CEEEEEcCCCCEEEEEEECCCC----------CEEEeeeEec
Confidence 8886 4654333321 2 3568999999 4555 4566666667899999986 32 1133444543
Q ss_pred cCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 266 KSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 266 ~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
.. +......++++|++++|++++...+.|+++.+..
T Consensus 189 ~~------~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 224 (365)
T 1jof_A 189 PD------PGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP 224 (365)
T ss_dssp SS------TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CC------CCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeC
Confidence 11 1234568899999999999998888888887764
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.49 E-value=0.00021 Score=85.65 Aligned_cols=48 Identities=8% Similarity=0.115 Sum_probs=35.6
Q ss_pred EeeecCceEEEeecC---------CcEEEEeCcchhhHhhcCCcc---------------------EEEeecCCCcee
Q 001070 152 QIAVNKHYVCYGLKG---------GNVRVLNLNTATRSLLRGHTK---------------------IKIWEDSKVAPL 199 (1165)
Q Consensus 152 ~IAVn~~yIayG~kd---------g~IRVwdi~t~ir~llrGH~q---------------------VriWD~~~g~pl 199 (1165)
.++.||+||+++..+ |.|.|||+.+.....|.+|.. |+|||..+|...
T Consensus 68 ~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 68 SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSY 145 (740)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCE
T ss_pred EECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceE
Confidence 357789999999887 556699999943334566544 899999888743
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.41 E-value=0.00056 Score=73.30 Aligned_cols=132 Identities=11% Similarity=0.093 Sum_probs=80.6
Q ss_pred EeeecCceEEEeecCCcEEEEeCcc-hhhHhhcC----------------------------------------------
Q 001070 152 QIAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRG---------------------------------------------- 184 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrG---------------------------------------------- 184 (1165)
.++.||++|+|+..++.|++||+.+ ..+.++..
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (388)
T 3pe7_A 87 FLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKP 166 (388)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCC
Confidence 4788999999999999999999997 44333222
Q ss_pred CccEEEeecCCCceeEEecCCCCCCcceeEeecCC-CCCCceEEEeecCC-----CceEEEeEccCcCCCCCCCCCCCcc
Q 001070 185 HTKIKIWEDSKVAPLIILKPHGGQPVNSAQYLTAP-NQAGHIILVTAGPL-----NREVKLWASASEEGWSLPTHAESWK 258 (1165)
Q Consensus 185 H~qVriWD~~~g~pl~~lephdG~sV~SVaFl~aP-~~~d~~~lvtsGsl-----nrtIKLW~~a~~~~~~~~~~~~~w~ 258 (1165)
+..|++||..+|.. ..+..+ +..+..++|. | ++ +.|+..... +..|.+|+++++
T Consensus 167 ~~~l~~~d~~~g~~-~~l~~~-~~~~~~~~~s--p~dg---~~l~~~~~~~~~~~~~~l~~~d~~~~------------- 226 (388)
T 3pe7_A 167 CCRLMRVDLKTGES-TVILQE-NQWLGHPIYR--PYDD---STVAFCHEGPHDLVDARMWLINEDGT------------- 226 (388)
T ss_dssp CEEEEEEETTTCCE-EEEEEE-SSCEEEEEEE--TTEE---EEEEEEECSCTTTSSCSEEEEETTSC-------------
T ss_pred cceEEEEECCCCce-EEeecC-CccccccEEC--CCCC---CEEEEEEecCCCCCcceEEEEeCCCC-------------
Confidence 13388889888864 344333 3468899994 5 44 334332221 336666665432
Q ss_pred eEEEEeccCCCCCccccccEEEEEeecCCcEE-EEeccCCC---cEEEEEeecCC
Q 001070 259 CTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLL-LFANAKKN---AIYSVHLGYGN 309 (1165)
Q Consensus 259 C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~i-lLan~~r~---aIYalhl~~g~ 309 (1165)
+.+.|... .....+..++.+|++++| ++++.... .||.+.++-|.
T Consensus 227 ~~~~l~~~------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 227 NMRKVKTH------AEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp CCEESCCC------CTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC
T ss_pred ceEEeeeC------CCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCc
Confidence 22233210 011345578899999966 55654443 38888876543
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.31 E-value=0.00062 Score=79.29 Aligned_cols=135 Identities=12% Similarity=0.052 Sum_probs=80.2
Q ss_pred eeecCceEEEeecC----------CcEEEEeCcc------h-hhHhh-cCCcc---------------------------
Q 001070 153 IAVNKHYVCYGLKG----------GNVRVLNLNT------A-TRSLL-RGHTK--------------------------- 187 (1165)
Q Consensus 153 IAVn~~yIayG~kd----------g~IRVwdi~t------~-ir~ll-rGH~q--------------------------- 187 (1165)
++-||++|+|+.++ ..|++||+.+ . .+.|. .+|..
T Consensus 137 ~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~ 216 (662)
T 3azo_A 137 LLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEG 216 (662)
T ss_dssp EETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTC
T ss_pred ECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCC
Confidence 55689999999887 6899999987 3 33344 34432
Q ss_pred --EEEeecC-CC--ceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEE
Q 001070 188 --IKIWEDS-KV--APLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQT 262 (1165)
Q Consensus 188 --VriWD~~-~g--~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QT 262 (1165)
|++||.. +| ..+.++..+.+..+++++| +||| +++++ +..+.+.+||..... .+++.+.
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~--spdg---~l~~~-~~~~~~~~l~~~~~~----------~~~~~~l 280 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEW--APDG---SLIVA-TDRTGWWNLHRVDPA----------TGAATQL 280 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEE--CTTS---CEEEE-ECTTSSCEEEEECTT----------TCCEEES
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEE--CCCC---eEEEE-ECCCCCeEEEEEECC----------CCceeec
Confidence 7788888 56 1233443322358999999 4555 43443 456665555554332 1245444
Q ss_pred EeccCCCCCcccccc---EEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 263 LDLKSSAKPRVEEAF---FNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 263 Le~~~s~~~~~~~af---f~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
+.++.... .-.+ ...++++|++.+++.++.....||.+.+.
T Consensus 281 ~~~~~~~~---~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 324 (662)
T 3azo_A 281 CRREEEFA---GPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPE 324 (662)
T ss_dssp SCCSSBSS---CCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETT
T ss_pred cccccccc---CccccccCceEeEeCCCEEEEEEEcCccEEEEEECC
Confidence 43211110 0011 23577789999888887655567777654
No 169
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.26 E-value=0.0014 Score=77.33 Aligned_cols=129 Identities=8% Similarity=0.123 Sum_probs=79.0
Q ss_pred eeecCceEEEeecCC----------------------------------cEEEEeCcc-hhh--------HhhcCCcc--
Q 001070 153 IAVNKHYVCYGLKGG----------------------------------NVRVLNLNT-ATR--------SLLRGHTK-- 187 (1165)
Q Consensus 153 IAVn~~yIayG~kdg----------------------------------~IRVwdi~t-~ir--------~llrGH~q-- 187 (1165)
++-||++|+|+..|. .|+|||+++ ..+ ..|.+|..
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF 255 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE
Confidence 455899999988652 899999998 443 34566654
Q ss_pred ------------------------EEEee----cCCCceeEEe----cCCCCCCcc-----eeEeecCCCCCCceEEE-e
Q 001070 188 ------------------------IKIWE----DSKVAPLIIL----KPHGGQPVN-----SAQYLTAPNQAGHIILV-T 229 (1165)
Q Consensus 188 ------------------------VriWD----~~~g~pl~~l----ephdG~sV~-----SVaFl~aP~~~d~~~lv-t 229 (1165)
|++|| ..+|.+...+ +.|+| +|. +++| +|||.. .+++ .
T Consensus 256 ~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~--spdg~~-l~~~~~ 331 (719)
T 1z68_A 256 SWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTG-WAGGFFVSTPVF--SYDAIS-YYKIFS 331 (719)
T ss_dssp EEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSS-CSSSSSCCCCEE--CTTSSC-EEEEEE
T ss_pred EEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCc-eEccccCCccEE--CCCCCe-EEEEEE
Confidence 77889 7777766666 46654 566 8999 577754 2232 2
Q ss_pred ecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEecc------CCCcEEEE
Q 001070 230 AGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANA------KKNAIYSV 303 (1165)
Q Consensus 230 sGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~------~r~aIYal 303 (1165)
......+|.+|+++++ . ..+|.. +..+ +..+... ++++|+.+.. ....||.+
T Consensus 332 ~~~g~~~l~~~~~~~~------------~-~~~lt~-------~~~~-v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~ 389 (719)
T 1z68_A 332 DKDGYKHIHYIKDTVE------------N-AIQITS-------GKWE-AINIFRV-TQDSLFYSSNEFEEYPGRRNIYRI 389 (719)
T ss_dssp CTTSCEEEEEESSCST------------T-CEECSC-------SSSC-EEEEEEE-CSSEEEEEESCGGGCTTCBEEEEE
T ss_pred ccCCceEEEEEECCCC------------c-eEeccc-------CceE-EEEEEEE-eCCEEEEEEecCCCCCceEEEEEE
Confidence 2444567888886443 2 123331 1112 3345445 6776655543 34678888
Q ss_pred Eeec
Q 001070 304 HLGY 307 (1165)
Q Consensus 304 hl~~ 307 (1165)
.+.-
T Consensus 390 ~~~~ 393 (719)
T 1z68_A 390 SIGS 393 (719)
T ss_dssp ECSS
T ss_pred eCCC
Confidence 7743
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.17 E-value=0.0075 Score=62.38 Aligned_cols=127 Identities=15% Similarity=0.176 Sum_probs=83.1
Q ss_pred cEeeec--CceEEEeecCCcEEEEeCcchhhHhhc--CCcc----------------------EEEeecCCCceeEEecC
Q 001070 151 RQIAVN--KHYVCYGLKGGNVRVLNLNTATRSLLR--GHTK----------------------IKIWEDSKVAPLIILKP 204 (1165)
Q Consensus 151 R~IAVn--~~yIayG~kdg~IRVwdi~t~ir~llr--GH~q----------------------VriWD~~~g~pl~~lep 204 (1165)
+.|+++ |+++++...++.|++||.+......+. +|.. |++||. +|..+..+..
T Consensus 124 ~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~ 202 (286)
T 1q7f_A 124 RGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGG 202 (286)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESC
T ss_pred eEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEcc
Confidence 557774 777777788899999998763333332 2211 889986 4555777754
Q ss_pred CCC--CCcceeEeecCCCCCCceEEEeecCCC-ceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEE
Q 001070 205 HGG--QPVNSAQYLTAPNQAGHIILVTAGPLN-REVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQV 281 (1165)
Q Consensus 205 hdG--~sV~SVaFl~aP~~~d~~~lvtsGsln-rtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV 281 (1165)
+ | ..+++++| .|++ .++|+ +..+ +.|++|+.. ++++.++.... .......+
T Consensus 203 ~-g~~~~p~~i~~--d~~G---~l~v~-~~~~~~~i~~~~~~-------------g~~~~~~~~~~------~~~~~~~i 256 (286)
T 1q7f_A 203 E-GITNYPIGVGI--NSNG---EILIA-DNHNNFNLTIFTQD-------------GQLISALESKV------KHAQCFDV 256 (286)
T ss_dssp T-TTSCSEEEEEE--CTTC---CEEEE-ECSSSCEEEEECTT-------------SCEEEEEEESS------CCSCEEEE
T ss_pred C-CccCCCcEEEE--CCCC---CEEEE-eCCCCEEEEEECCC-------------CCEEEEEcccC------CCCcceeE
Confidence 4 3 47899999 4544 44554 5555 499999942 25677776521 12235588
Q ss_pred EeecCCcEEEEeccCCCcEEEEEee
Q 001070 282 VVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 282 ~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
+++|++. |++++. .+.|+++.+.
T Consensus 257 ~~~~~g~-l~vs~~-~~~v~v~~~~ 279 (286)
T 1q7f_A 257 ALMDDGS-VVLASK-DYRLYIYRYV 279 (286)
T ss_dssp EEETTTE-EEEEET-TTEEEEEECS
T ss_pred EECCCCc-EEEECC-CCeEEEEEcc
Confidence 9999987 555664 6788888654
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.10 E-value=0.0092 Score=64.13 Aligned_cols=154 Identities=13% Similarity=0.130 Sum_probs=94.8
Q ss_pred cccccccCCCcc-cccc--cEeeec--CceEEEeecC------------------------CcEEEEeCcc-hhhHhh-c
Q 001070 135 VNPITKYGSDPE-LLIG--RQIAVN--KHYVCYGLKG------------------------GNVRVLNLNT-ATRSLL-R 183 (1165)
Q Consensus 135 v~pIt~Y~sd~~-~~~G--R~IAVn--~~yIayG~kd------------------------g~IRVwdi~t-~ir~ll-r 183 (1165)
..+++++.|... ..+| ..||+| |++++.+..+ +.|.+||..+ .+...+ .
T Consensus 8 ~~~~~~~~wp~~~~~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~ 87 (329)
T 3fvz_A 8 FHVEEELDWPGVYLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK 87 (329)
T ss_dssp EEEEECTTCGGGGCCCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT
T ss_pred cccccccCCchhceecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC
Confidence 345566666332 1223 347775 7777777666 5799999986 443322 2
Q ss_pred CCcc----------------------EEEeecCCCc-eeEEecCC------CC--CCcceeEeecCCCCCCceEEEeecC
Q 001070 184 GHTK----------------------IKIWEDSKVA-PLIILKPH------GG--QPVNSAQYLTAPNQAGHIILVTAGP 232 (1165)
Q Consensus 184 GH~q----------------------VriWD~~~g~-pl~~leph------dG--~sV~SVaFl~aP~~~d~~~lvtsGs 232 (1165)
+|-. |++||..... .+..+... +| ..++.|+| .|+ ++.++| +.+
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~--~~~--~g~lyv-~d~ 162 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAV--EPS--TGAVFV-SDG 162 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEE--CTT--TCCEEE-EEC
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEE--eCC--CCeEEE-EeC
Confidence 3311 8888865432 45555311 11 26889999 342 334455 454
Q ss_pred -CCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCC--CccccccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 233 -LNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAK--PRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 233 -lnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~--~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
.+.+|++|+.. ++++.++....... ..++-.+...++++|+++.|+++|...+.|+.+-..
T Consensus 163 ~~~~~I~~~~~~-------------g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 163 YCNSRIVQFSPS-------------GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp SSCCEEEEECTT-------------SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCeEEEEcCC-------------CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 78999999942 25666665322210 012334577899999999999999999999988765
No 172
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.02 E-value=0.0019 Score=73.85 Aligned_cols=116 Identities=17% Similarity=0.117 Sum_probs=80.1
Q ss_pred cEeeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc--------------------EEEeecCCCceeEEecCCCCCC
Q 001070 151 RQIAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK--------------------IKIWEDSKVAPLIILKPHGGQP 209 (1165)
Q Consensus 151 R~IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q--------------------VriWD~~~g~pl~~lephdG~s 209 (1165)
+.++.||+||+.| ++|.|+|||+.+ .....+..|+. |.+||+.++.... + +..
T Consensus 91 ~~l~fd~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-~----~~~ 164 (388)
T 1xip_A 91 IFVCFHGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-L----AQN 164 (388)
T ss_dssp EEEEEETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-E----EES
T ss_pred eEEEECCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-c----cCC
Confidence 4566699999999 999999999876 32222333333 8899998877432 2 347
Q ss_pred cceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcce--EEEEeccCCC-CCccccccEEEEEeecC
Q 001070 210 VNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKC--TQTLDLKSSA-KPRVEEAFFNQVVVLSQ 286 (1165)
Q Consensus 210 V~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C--~QTLe~~~s~-~~~~~~aff~sV~~~p~ 286 (1165)
|.|++| +|.| + + .|..|.+|++|+.++. .| ..||.-+++- +..+|+-.+.+|...+.
T Consensus 165 Vs~v~W--SpkG---~--~-vg~~dg~i~~~~~~~~------------~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 165 VTSFDV--TNSQ---L--A-VLLKDRSFQSFAWRNG------------EMEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp EEEEEE--CSSE---E--E-EEETTSCEEEEEEETT------------EEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred ceEEEE--cCCc---e--E-EEEcCCcEEEEcCCCc------------cccccceecCCcccccccCCCeeEEEEEEecC
Confidence 999999 4666 2 3 3678899999987554 77 6677543221 11134566778889998
Q ss_pred CcEEEE
Q 001070 287 AGLLLF 292 (1165)
Q Consensus 287 a~~ilL 292 (1165)
..|++.
T Consensus 225 ~~flv~ 230 (388)
T 1xip_A 225 QDFLAV 230 (388)
T ss_dssp SEEEEE
T ss_pred CeEEEE
Confidence 888875
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.01 E-value=0.0082 Score=62.08 Aligned_cols=127 Identities=11% Similarity=0.119 Sum_probs=83.3
Q ss_pred Eeeec--CceEEEeecCCcEEEEeCcchhhHhhc------CCc------------------------cEEEeecCCCcee
Q 001070 152 QIAVN--KHYVCYGLKGGNVRVLNLNTATRSLLR------GHT------------------------KIKIWEDSKVAPL 199 (1165)
Q Consensus 152 ~IAVn--~~yIayG~kdg~IRVwdi~t~ir~llr------GH~------------------------qVriWD~~~g~pl 199 (1165)
.|+++ |++++++..++.|++||.+......+. +|. .|++|| .+|..+
T Consensus 34 ~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~ 112 (286)
T 1q7f_A 34 GVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFV 112 (286)
T ss_dssp EEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEE
T ss_pred eEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEE
Confidence 36663 677777778899999998763222221 111 177787 556667
Q ss_pred EEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEE
Q 001070 200 IILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFN 279 (1165)
Q Consensus 200 ~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~ 279 (1165)
..+.......+++++| .|++ +++| ++..+..|.+|+..+ +.+.++... ++-...+
T Consensus 113 ~~~~~~~~~~~~~i~~--~~~g---~l~v-~~~~~~~i~~~~~~g-------------~~~~~~~~~------~~~~~p~ 167 (286)
T 1q7f_A 113 RKFGATILQHPRGVTV--DNKG---RIIV-VECKVMRVIIFDQNG-------------NVLHKFGCS------KHLEFPN 167 (286)
T ss_dssp EEECTTTCSCEEEEEE--CTTS---CEEE-EETTTTEEEEECTTS-------------CEEEEEECT------TTCSSEE
T ss_pred EEecCccCCCceEEEE--eCCC---CEEE-EECCCCEEEEEcCCC-------------CEEEEeCCC------CccCCcE
Confidence 6675433457889999 3443 4344 566788999999532 455555431 1234567
Q ss_pred EEEeecCCcEEEEeccCCCcEEEEEe
Q 001070 280 QVVVLSQAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 280 sV~~~p~a~~ilLan~~r~aIYalhl 305 (1165)
.+++++++. |++++...+.||.+..
T Consensus 168 ~i~~~~~g~-l~v~~~~~~~i~~~~~ 192 (286)
T 1q7f_A 168 GVVVNDKQE-IFISDNRAHCVKVFNY 192 (286)
T ss_dssp EEEECSSSE-EEEEEGGGTEEEEEET
T ss_pred EEEECCCCC-EEEEECCCCEEEEEcC
Confidence 899999977 7788888899999864
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.98 E-value=0.0019 Score=68.88 Aligned_cols=132 Identities=9% Similarity=0.064 Sum_probs=78.9
Q ss_pred EeeecCceEEEeecCCcEEEEeCcc-hhhHhhcCC---------------------------------------------
Q 001070 152 QIAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGH--------------------------------------------- 185 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH--------------------------------------------- 185 (1165)
.++-||++|+|+..++.|++||+.+ ..+.++.+|
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 87 FISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred eECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 3577899999999999999999987 444444322
Q ss_pred -ccEEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCC----ceEEEeEccCcCCCCCCCCCCCcceE
Q 001070 186 -TKIKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLN----REVKLWASASEEGWSLPTHAESWKCT 260 (1165)
Q Consensus 186 -~qVriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGsln----rtIKLW~~a~~~~~~~~~~~~~w~C~ 260 (1165)
..|++||..+|....... + +..+..++|. |+... ++++++...+ .+|.+|+++++ . .
T Consensus 167 ~~~l~~~d~~~g~~~~~~~-~-~~~~~~~~~s--p~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~------------~-~ 228 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQ-D-TAWLGHPIYR--PFDDS-TVGFCHEGPHDLVDARMWLVNEDGS------------N-V 228 (396)
T ss_dssp CEEEEEEETTTCCEEEEEE-E-SSCEEEEEEE--TTEEE-EEEEEECSCSSSCSCCCEEEETTSC------------C-C
T ss_pred cceEEEEECCCCcEEeecc-C-CcccccceEC--CCCCC-EEEEEecCCCCCCCceEEEEECCCC------------c-e
Confidence 238889988887544442 2 3478899994 52112 2233332222 46777776432 1 1
Q ss_pred EEEeccCCCCCccccccEEEEEeecCCcEEEEeccC--C--CcEEEEEeec
Q 001070 261 QTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAK--K--NAIYSVHLGY 307 (1165)
Q Consensus 261 QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~--r--~aIYalhl~~ 307 (1165)
+.+.- . .....+..++++|++++|+.+... . ..||.+.+.-
T Consensus 229 ~~l~~---~---~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 229 RKIKE---H---AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET 273 (396)
T ss_dssp EESSC---C---CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT
T ss_pred eEeec---c---CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCC
Confidence 22211 0 012345678899999976665332 2 3388887654
No 175
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.97 E-value=0.01 Score=64.21 Aligned_cols=130 Identities=10% Similarity=0.044 Sum_probs=84.9
Q ss_pred cccEeee--cCceEEEeecCCcEEEEeCcc-hhhHhhc-CC------cc--------------------EEEeecCCCce
Q 001070 149 IGRQIAV--NKHYVCYGLKGGNVRVLNLNT-ATRSLLR-GH------TK--------------------IKIWEDSKVAP 198 (1165)
Q Consensus 149 ~GR~IAV--n~~yIayG~kdg~IRVwdi~t-~ir~llr-GH------~q--------------------VriWD~~~g~p 198 (1165)
..+.|++ ||+..++...++.|.+||..+ .+...+. |. .- |.+||..++..
T Consensus 85 ~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~ 164 (328)
T 3dsm_A 85 SPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKV 164 (328)
T ss_dssp SEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEE
T ss_pred CCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeE
Confidence 3567777 454333333689999999998 4433222 22 00 77888888776
Q ss_pred eEEecCCCCCCcceeEeecCCCCCCceEEEeecCC---------CceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCC
Q 001070 199 LIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPL---------NREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSA 269 (1165)
Q Consensus 199 l~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGsl---------nrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~ 269 (1165)
+.++.. |..+..++| .|+ +++++++... ..+|.+||.++. +.++++.+..
T Consensus 165 ~~~i~~--g~~p~~i~~--~~d---G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~------------~v~~~~~~~~-- 223 (328)
T 3dsm_A 165 VDELTI--GIQPTSLVM--DKY---NKMWTITDGGYEGSPYGYEAPSLYRIDAETF------------TVEKQFKFKL-- 223 (328)
T ss_dssp EEEEEC--SSCBCCCEE--CTT---SEEEEEBCCBCTTCSSCBCCCEEEEEETTTT------------EEEEEEECCT--
T ss_pred EEEEEc--CCCccceEE--cCC---CCEEEEECCCccCCccccCCceEEEEECCCC------------eEEEEEecCC--
Confidence 666653 456778888 344 4545543322 268999997443 6777777521
Q ss_pred CCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 270 KPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 270 ~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
....+.++++|++++|+++|. .||++-..-
T Consensus 224 -----g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t 253 (328)
T 3dsm_A 224 -----GDWPSEVQLNGTRDTLYWINN---DIWRMPVEA 253 (328)
T ss_dssp -----TCCCEEEEECTTSCEEEEESS---SEEEEETTC
T ss_pred -----CCCceeEEEecCCCEEEEEcc---EEEEEECCC
Confidence 124568999999999999997 899877653
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.96 E-value=0.0018 Score=69.06 Aligned_cols=130 Identities=9% Similarity=0.014 Sum_probs=79.6
Q ss_pred EeeecCceEEEeecC---CcEEEEeCcc-hhhHhhcCCcc----------------------EEEeecCCCceeEEecCC
Q 001070 152 QIAVNKHYVCYGLKG---GNVRVLNLNT-ATRSLLRGHTK----------------------IKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 152 ~IAVn~~yIayG~kd---g~IRVwdi~t-~ir~llrGH~q----------------------VriWD~~~g~pl~~leph 205 (1165)
.++.||++|+|.... ..|++||+.+ ..+.+..++.. |++||..+|.....+..+
T Consensus 42 ~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~ 121 (396)
T 3c5m_A 42 CFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVD 121 (396)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred cCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecc
Confidence 466788898887654 4789999988 55555555433 889998888766666544
Q ss_pred CCCCcce---eEeec--------------CCCCCCceEEEeec----CCCceEEEeEccCcCCCCCCCCCCCcceEEEEe
Q 001070 206 GGQPVNS---AQYLT--------------APNQAGHIILVTAG----PLNREVKLWASASEEGWSLPTHAESWKCTQTLD 264 (1165)
Q Consensus 206 dG~sV~S---VaFl~--------------aP~~~d~~~lvtsG----slnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe 264 (1165)
.+ .... ++|.. .|++. .++... ..+.+|.+||++++ ++.+.+.
T Consensus 122 ~~-~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~---~~~~~~~~~~~~~~~l~~~d~~~g------------~~~~~~~ 185 (396)
T 3c5m_A 122 EE-WKGYGTWVANSDCTKLVGIEILKRDWQPLTS---WEKFAEFYHTNPTCRLIKVDIETG------------ELEVIHQ 185 (396)
T ss_dssp TT-EEEEEEEEECTTSSEEEEEEEEGGGCCCCCS---HHHHHHHHHTCCCEEEEEEETTTC------------CEEEEEE
T ss_pred cc-cCCCCCEEEeccCCccccccccccccCCCCc---ceeeeeeccCCCcceEEEEECCCC------------cEEeecc
Confidence 33 2222 33321 34442 233222 56778999998554 4544443
Q ss_pred ccCCCCCccccccEEEEEeec-CCcEEE-EeccCC----CcEEEEEee
Q 001070 265 LKSSAKPRVEEAFFNQVVVLS-QAGLLL-FANAKK----NAIYSVHLG 306 (1165)
Q Consensus 265 ~~~s~~~~~~~aff~sV~~~p-~a~~il-Lan~~r----~aIYalhl~ 306 (1165)
+...+..+..+| ++++|+ +++... ..||.+.+.
T Consensus 186 ---------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (396)
T 3c5m_A 186 ---------DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED 224 (396)
T ss_dssp ---------ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT
T ss_pred ---------CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC
Confidence 234567888999 787554 444322 578888765
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.93 E-value=0.01 Score=62.54 Aligned_cols=132 Identities=11% Similarity=0.083 Sum_probs=79.0
Q ss_pred cEeee--cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc--------------------------EEEeecCCCceeEE
Q 001070 151 RQIAV--NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK--------------------------IKIWEDSKVAPLII 201 (1165)
Q Consensus 151 R~IAV--n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q--------------------------VriWD~~~g~pl~~ 201 (1165)
..+++ ||+.++.+..++.|++||.++ .++.++..|.. |.+||..++.....
T Consensus 48 ~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 48 EGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEE
T ss_pred cCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEE
Confidence 34555 467666788889999999876 44443322222 55666555543223
Q ss_pred ec-CCCCCCcceeEeecCCCCCCceEEEeecC---CCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcccccc
Q 001070 202 LK-PHGGQPVNSAQYLTAPNQAGHIILVTAGP---LNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAF 277 (1165)
Q Consensus 202 le-phdG~sV~SVaFl~aP~~~d~~~lvtsGs---lnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~af 277 (1165)
+. ...+..+++++| .|++ ++++++.. .+...+||.+.... .++..... ....
T Consensus 128 ~~~~~~~~~~~~i~~--d~~g---~l~v~~~~~~~~~~~~~l~~~~~~~----------~~~~~~~~---------~~~~ 183 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVF--DSKG---GFYFTDFRGYSTNPLGGVYYVSPDF----------RTVTPIIQ---------NISV 183 (333)
T ss_dssp ECSSSSCCCEEEEEE--CTTS---CEEEEECCCBTTBCCEEEEEECTTS----------CCEEEEEE---------EESS
T ss_pred EccCccCCcccceEE--CCCC---CEEEEeccccccCCCceEEEEeCCC----------CEEEEeec---------CCCc
Confidence 32 123457888898 4544 44554321 12345666654321 12322211 1234
Q ss_pred EEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 278 FNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 278 f~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
.+.++++|++++|++++...+.||.+.+.
T Consensus 184 ~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 184 ANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 67889999999999999888999999875
No 178
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.87 E-value=0.0079 Score=65.02 Aligned_cols=129 Identities=9% Similarity=0.075 Sum_probs=82.8
Q ss_pred ccEeeecCceEEE-eecCCcEEEEeCcc-hhhHhhcCCcc---------------------EEEeecCCCceeEEecCCC
Q 001070 150 GRQIAVNKHYVCY-GLKGGNVRVLNLNT-ATRSLLRGHTK---------------------IKIWEDSKVAPLIILKPHG 206 (1165)
Q Consensus 150 GR~IAVn~~yIay-G~kdg~IRVwdi~t-~ir~llrGH~q---------------------VriWD~~~g~pl~~lephd 206 (1165)
++.|++++.+|.- ...++.|.|||.+| .+...+.+... |.+||..++..+.++.-..
T Consensus 46 ~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~ 125 (328)
T 3dsm_A 46 AQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPD 125 (328)
T ss_dssp EEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTT
T ss_pred ceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCC
Confidence 3557776555433 33579999999998 55343443332 7788888877666665432
Q ss_pred CC----CcceeEeecCCCCCCceEEEeecC-CCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEE
Q 001070 207 GQ----PVNSAQYLTAPNQAGHIILVTAGP-LNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQV 281 (1165)
Q Consensus 207 G~----sV~SVaFl~aP~~~d~~~lvtsGs-lnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV 281 (1165)
+. .+..++| .+++.+|+ .. .+++|.+||+++. +.++++.... ..+.+
T Consensus 126 ~~~~~~~p~~i~~------~~~~lyv~-~~~~~~~v~viD~~t~------------~~~~~i~~g~---------~p~~i 177 (328)
T 3dsm_A 126 MDMESGSTEQMVQ------YGKYVYVN-CWSYQNRILKIDTETD------------KVVDELTIGI---------QPTSL 177 (328)
T ss_dssp CCTTTCBCCCEEE------ETTEEEEE-ECTTCCEEEEEETTTT------------EEEEEEECSS---------CBCCC
T ss_pred ccccCCCcceEEE------ECCEEEEE-cCCCCCEEEEEECCCC------------eEEEEEEcCC---------Cccce
Confidence 11 6777888 23343444 44 5889999998554 7777887521 22367
Q ss_pred EeecCCcEEEEeccC---------CCcEEEEEee
Q 001070 282 VVLSQAGLLLFANAK---------KNAIYSVHLG 306 (1165)
Q Consensus 282 ~~~p~a~~ilLan~~---------r~aIYalhl~ 306 (1165)
+++|++++++.++-. .+.||++...
T Consensus 178 ~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 178 VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred EEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 789999876666544 3778888654
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.81 E-value=0.006 Score=65.19 Aligned_cols=128 Identities=13% Similarity=0.077 Sum_probs=82.6
Q ss_pred CceEEEeecCCcEEEEeCcc-hhhHhhcCCc---c------------------EEEeecCCCceeEEecCCCCCCcceeE
Q 001070 157 KHYVCYGLKGGNVRVLNLNT-ATRSLLRGHT---K------------------IKIWEDSKVAPLIILKPHGGQPVNSAQ 214 (1165)
Q Consensus 157 ~~yIayG~kdg~IRVwdi~t-~ir~llrGH~---q------------------VriWD~~~g~pl~~lephdG~sV~SVa 214 (1165)
|++|+.|..|+.|.+||.+| .+...+..|. . |+.||- +|..+-+++.+++..++++.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~ 83 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAPAGCEMQTAR 83 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECCTTCEEEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCCCccccccE
Confidence 56777899999999999977 6666666553 1 788887 78878888876556899999
Q ss_pred eecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEec
Q 001070 215 YLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFAN 294 (1165)
Q Consensus 215 Fl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan 294 (1165)
|+ ++++++|+.+..+.+|..|+.. | +-+.++.+.... .++......+..++++++|+ ++
T Consensus 84 ~~-----~dG~~lv~~~~~~~~v~~vd~~---G----------k~l~~~~~~~~~--~~~~~~~~~v~~~~~G~~lv-~~ 142 (276)
T 3no2_A 84 IL-----PDGNALVAWCGHPSTILEVNMK---G----------EVLSKTEFETGI--ERPHAQFRQINKNKKGNYLV-PL 142 (276)
T ss_dssp EC-----TTSCEEEEEESTTEEEEEECTT---S----------CEEEEEEECCSC--SSGGGSCSCCEECTTSCEEE-EE
T ss_pred EC-----CCCCEEEEecCCCCEEEEEeCC---C----------CEEEEEeccCCC--CcccccccCceECCCCCEEE-Ee
Confidence 96 5556577543325555555531 1 333344432211 11223344567788888664 56
Q ss_pred cCCCcEEEEEee
Q 001070 295 AKKNAIYSVHLG 306 (1165)
Q Consensus 295 ~~r~aIYalhl~ 306 (1165)
...+.||++-..
T Consensus 143 ~~~~~v~~~d~~ 154 (276)
T 3no2_A 143 FATSEVREIAPN 154 (276)
T ss_dssp TTTTEEEEECTT
T ss_pred cCCCEEEEECCC
Confidence 667788888765
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.79 E-value=0.0044 Score=65.45 Aligned_cols=117 Identities=15% Similarity=0.207 Sum_probs=72.6
Q ss_pred cCceEEEee---------cCCcEEEEeCcc-hhhHhhcC-----------------------CccEEEeecCCCceeEEe
Q 001070 156 NKHYVCYGL---------KGGNVRVLNLNT-ATRSLLRG-----------------------HTKIKIWEDSKVAPLIIL 202 (1165)
Q Consensus 156 n~~yIayG~---------kdg~IRVwdi~t-~ir~llrG-----------------------H~qVriWD~~~g~pl~~l 202 (1165)
||++|+|.. .++.|++||+.+ ..+.| .. ..+|.+||..+|.+....
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~ 101 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKIL 101 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEE
Confidence 888888853 267899999887 33322 11 112677788777655444
Q ss_pred cCCCCCCcceeEeecCCCCCCceEEEeecC--------------------------CCceEEEeEccCcCCCCCCCCCCC
Q 001070 203 KPHGGQPVNSAQYLTAPNQAGHIILVTAGP--------------------------LNREVKLWASASEEGWSLPTHAES 256 (1165)
Q Consensus 203 ephdG~sV~SVaFl~aP~~~d~~~lvtsGs--------------------------lnrtIKLW~~a~~~~~~~~~~~~~ 256 (1165)
.. .+ |.+++| +|++.. |+.++. ....|.+|++.++
T Consensus 102 ~~-~~--~~~~~w--spdg~~---l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~----------- 162 (347)
T 2gop_A 102 EA-KN--IRSLEW--NEDSRK---LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE----------- 162 (347)
T ss_dssp EE-SE--EEEEEE--CTTSSE---EEEEEECCCC---------CCCC---------CEEEEEEEETTTT-----------
T ss_pred cC-CC--ccceeE--CCCCCE---EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC-----------
Confidence 33 23 999999 566532 443331 1467888987554
Q ss_pred cceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccC--------CCcEEEEE
Q 001070 257 WKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAK--------KNAIYSVH 304 (1165)
Q Consensus 257 w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~--------r~aIYalh 304 (1165)
.+++.|.. . .+..++.+|++ +++.++.. ...||.+.
T Consensus 163 -~~~~~l~~---------~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 163 -EVIEEFEK---------P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp -EEEEEEEE---------E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred -eEEeeecC---------C-CcccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence 56566653 1 34477889999 77777553 34677766
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.76 E-value=0.02 Score=68.23 Aligned_cols=134 Identities=11% Similarity=0.091 Sum_probs=84.6
Q ss_pred cccEeeecCceEEEeec-----CCcEEEEeCcc------h--hhHhhcCCcc-------------------------EEE
Q 001070 149 IGRQIAVNKHYVCYGLK-----GGNVRVLNLNT------A--TRSLLRGHTK-------------------------IKI 190 (1165)
Q Consensus 149 ~GR~IAVn~~yIayG~k-----dg~IRVwdi~t------~--ir~llrGH~q-------------------------Vri 190 (1165)
.+=.++-||+||+++.. +..|++||+++ . ....|.+|.. |.+
T Consensus 236 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~ 315 (710)
T 2xdw_A 236 GGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLIN 315 (710)
T ss_dssp EEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEE
T ss_pred EEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEE
Confidence 33346668999999876 67899999976 2 1223344433 778
Q ss_pred eecCCCce--eEEecCCCC-CCcceeEeecCCCCCCceEEEeecCCCce--EEEeEccCcCCCCCCCCCCCcceEEEEec
Q 001070 191 WEDSKVAP--LIILKPHGG-QPVNSAQYLTAPNQAGHIILVTAGPLNRE--VKLWASASEEGWSLPTHAESWKCTQTLDL 265 (1165)
Q Consensus 191 WD~~~g~p--l~~lephdG-~sV~SVaFl~aP~~~d~~~lvtsGslnrt--IKLW~~a~~~~~~~~~~~~~w~C~QTLe~ 265 (1165)
||..++.+ ...+.+|.. ..|.+++|. + +.. |+.++..|.. |.+|++.. ++++++|.+
T Consensus 316 ~d~~~~~~~~~~~l~~~~~~~~~~~~~~~--~---~~~-lv~~~~~~g~~~l~~~~~~~------------g~~~~~l~~ 377 (710)
T 2xdw_A 316 IDFTDPEESKWKVLVPEHEKDVLEWVACV--R---SNF-LVLCYLHDVKNTLQLHDLAT------------GALLKIFPL 377 (710)
T ss_dssp EETTSCCGGGCEEEECCCSSCEEEEEEEE--T---TTE-EEEEEEETTEEEEEEEETTT------------CCEEEEECC
T ss_pred EeCCCCCcccceeccCCCCCCeEEEEEEE--c---CCE-EEEEEEECCEEEEEEEECCC------------CCEEEecCC
Confidence 88877642 456666643 478889994 2 333 4445656665 45555422 267888886
Q ss_pred cCCCCCccccccEEEEEeecCCcEEEEe--cc-CCCcEEEEEeecC
Q 001070 266 KSSAKPRVEEAFFNQVVVLSQAGLLLFA--NA-KKNAIYSVHLGYG 308 (1165)
Q Consensus 266 ~~s~~~~~~~aff~sV~~~p~a~~ilLa--n~-~r~aIYalhl~~g 308 (1165)
+ ...+..+..+|++..|+++ +. .-..||.+.+.-+
T Consensus 378 ~--------~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 378 E--------VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp C--------SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred C--------CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 2 3456677888998866654 33 3456888776544
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.71 E-value=0.013 Score=61.25 Aligned_cols=132 Identities=12% Similarity=0.048 Sum_probs=82.8
Q ss_pred ccccEeeec--Cc-eEEEeecCCcEEEEeCcchhhHhhcCCcc----------------------EEEeecCCCceeEEe
Q 001070 148 LIGRQIAVN--KH-YVCYGLKGGNVRVLNLNTATRSLLRGHTK----------------------IKIWEDSKVAPLIIL 202 (1165)
Q Consensus 148 ~~GR~IAVn--~~-yIayG~kdg~IRVwdi~t~ir~llrGH~q----------------------VriWD~~~g~pl~~l 202 (1165)
..+..++.+ |+ .++.+..++.|++||.++. ...+..+.. |.+||..+|......
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 345556664 66 6778899999999999876 333333333 778887777643333
Q ss_pred cCCCC---CCcceeEeecCCCCCCceEEEee---cCCC-----------ceEEEeEccCcCCCCCCCCCCCcceEEEEec
Q 001070 203 KPHGG---QPVNSAQYLTAPNQAGHIILVTA---GPLN-----------REVKLWASASEEGWSLPTHAESWKCTQTLDL 265 (1165)
Q Consensus 203 ephdG---~sV~SVaFl~aP~~~d~~~lvts---Gsln-----------rtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~ 265 (1165)
..+.| ..++.++| .|+ ++++++. |..+ ..-+||.+... | +. ..+.
T Consensus 107 ~~~~~~~~~~~~~i~~--d~~---G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g----------~~-~~~~- 168 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCL--APD---GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G----------TL-SAPI- 168 (296)
T ss_dssp CEETTEECCCCCCEEE--CTT---SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S----------CE-EEEE-
T ss_pred eccCCCCCCCCCCEEE--CCC---CCEEEECCccccccccccccccccCCCcEEEEECCC-C----------CE-EEee-
Confidence 32222 36788999 344 4556642 2210 12356665332 1 22 2222
Q ss_pred cCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 266 KSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 266 ~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
.+..+.+.++++|++++| +++...+.||++.+.
T Consensus 169 -------~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 169 -------RDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLN 201 (296)
T ss_dssp -------CCCSSEEEEEECTTSCEE-EEETTTTEEEEEEEC
T ss_pred -------cCCCCCccEEECCCCCEE-EEeCCCCeEEEEEEC
Confidence 123566889999999999 999999999999886
No 183
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.61 E-value=0.0075 Score=70.24 Aligned_cols=127 Identities=10% Similarity=-0.010 Sum_probs=74.6
Q ss_pred EeeecCceEEEeecCC--------cEEEEeCc-c----hhhHhhcCCcc------------------------EEEeecC
Q 001070 152 QIAVNKHYVCYGLKGG--------NVRVLNLN-T----ATRSLLRGHTK------------------------IKIWEDS 194 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg--------~IRVwdi~-t----~ir~llrGH~q------------------------VriWD~~ 194 (1165)
.++-||++|+++..++ .|+|||++ + ..+.++.+|.. |.+||..
T Consensus 194 ~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~ 273 (662)
T 3azo_A 194 RLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPA 273 (662)
T ss_dssp EECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTT
T ss_pred eECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECC
Confidence 4677899999988653 89999998 3 45667777643 5556665
Q ss_pred CCceeEEecCCCCCC--------cceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEecc
Q 001070 195 KVAPLIILKPHGGQP--------VNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLK 266 (1165)
Q Consensus 195 ~g~pl~~lephdG~s--------V~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~ 266 (1165)
+|.. ..+.++++.. +.+++|. | +++++++ +.. .+++||.+.... .+.++|..
T Consensus 274 ~~~~-~~l~~~~~~~~~p~w~~~~~~~~~~--~---~~~~~~~-~~~-~~~~l~~~d~~~-----------~~~~~l~~- 333 (662)
T 3azo_A 274 TGAA-TQLCRREEEFAGPLWTPGMRWFAPL--A---NGLIAVV-HGK-GAAVLGILDPES-----------GELVDAAG- 333 (662)
T ss_dssp TCCE-EESSCCSSBSSCCCCSTTCCSEEEC--T---TSCEEEE-EBS-SSCEEEEEETTT-----------TEEEECCS-
T ss_pred CCce-eecccccccccCccccccCceEeEe--C---CCEEEEE-EEc-CccEEEEEECCC-----------CcEEEecC-
Confidence 6653 3444443321 5678884 3 4454555 444 899999664321 23566654
Q ss_pred CCCCCccccccEEEEEeecCCcEEEEeccCC---CcEEEEEee
Q 001070 267 SSAKPRVEEAFFNQVVVLSQAGLLLFANAKK---NAIYSVHLG 306 (1165)
Q Consensus 267 ~s~~~~~~~aff~sV~~~p~a~~ilLan~~r---~aIYalhl~ 306 (1165)
+...+..+. +++++.++++.... ..||.+-+.
T Consensus 334 -------~~~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~d~~ 368 (662)
T 3azo_A 334 -------PWTEWAATL-TVSGTRAVGVAASPRTAYEVVELDTV 368 (662)
T ss_dssp -------SCCEEEEEE-EEETTEEEEEEEETTEEEEEEEEETT
T ss_pred -------CCCeEEEEE-ecCCCEEEEEEcCCCCCCEEEEEECC
Confidence 223333441 55666555443332 367776544
No 184
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.57 E-value=0.0089 Score=65.87 Aligned_cols=72 Identities=13% Similarity=0.058 Sum_probs=54.6
Q ss_pred EEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCc--ceEEEEec
Q 001070 188 IKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESW--KCTQTLDL 265 (1165)
Q Consensus 188 VriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w--~C~QTLe~ 265 (1165)
|.|||.+++..+.++..+ . +++++|. |+| ++|.+++. .+|.+||. .++ ++++++.-
T Consensus 288 v~viD~~t~~~v~~i~~~--~-p~~ia~s--pdg---~~l~v~n~--~~v~v~D~------------~t~~l~~~~~i~~ 345 (361)
T 2oiz_A 288 IWVMDTKTKQRVARIPGR--D-ALSMTID--QQR---NLMLTLDG--GNVNVYDI------------SQPEPKLLRTIEG 345 (361)
T ss_dssp EEEEETTTTEEEEEEECT--T-CCEEEEE--TTT---TEEEEECS--SCEEEEEC------------SSSSCEEEEEETT
T ss_pred EEEEECCCCcEEEEEecC--C-eeEEEEC--CCC---CEEEEeCC--CeEEEEEC------------CCCcceeeEEecc
Confidence 889999999999999765 3 9999994 554 45776664 89999997 456 88888842
Q ss_pred cCCCCCccccccEEEEEeecCCcE
Q 001070 266 KSSAKPRVEEAFFNQVVVLSQAGL 289 (1165)
Q Consensus 266 ~~s~~~~~~~aff~sV~~~p~a~~ 289 (1165)
..+.-+.++++|+|++
T Consensus 346 --------~G~~P~~~~~~p~G~~ 361 (361)
T 2oiz_A 346 --------AAEASLQVQFHPVGGT 361 (361)
T ss_dssp --------SCSSEEEEEECCCSCC
T ss_pred --------CCCCcEEEEecCCCCC
Confidence 2244457889999874
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.44 E-value=0.0078 Score=71.76 Aligned_cols=117 Identities=13% Similarity=0.223 Sum_probs=68.4
Q ss_pred EeeecCceEEEeecCCcEEEEeCcchhhHhhcCCc--cEEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEe
Q 001070 152 QIAVNKHYVCYGLKGGNVRVLNLNTATRSLLRGHT--KIKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVT 229 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg~IRVwdi~t~ir~llrGH~--qVriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvt 229 (1165)
.++-||++|||++.++ |.+ +|+|||+.+|..+....+ +..+.+++| +|||.. |+.
T Consensus 131 ~~SPDg~~la~~~~~~----------------G~~~~~i~v~d~~tg~~~~~~~~--~~~~~~~~w--spDg~~---l~~ 187 (710)
T 2xdw_A 131 AFSEDGEYFAYGLSAS----------------GSDWVTIKFMKVDGAKELPDVLE--RVKFSCMAW--THDGKG---MFY 187 (710)
T ss_dssp EECTTSSEEEEEEEET----------------TCSCEEEEEEETTTTEEEEEEEE--EECSCCEEE--CTTSSE---EEE
T ss_pred EECCCCCEEEEEEcCC----------------CCceEEEEEEECCCCCCCccccc--CcccceEEE--EeCCCE---EEE
Confidence 3666899999987643 222 255555555554332111 113677888 455532 332
Q ss_pred ec-C--------------CCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEec
Q 001070 230 AG-P--------------LNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFAN 294 (1165)
Q Consensus 230 sG-s--------------lnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan 294 (1165)
+. . ....|++|++.++. ..++..++.. .+..++..+.++|++++|+++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~----------~~~~~v~~~~------~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 188 NAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ----------SEDILCAEFP------DEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp EECCCCSSCCSSSCCCCCCCCEEEEEETTSCG----------GGCEEEECCT------TCTTCEEEEEECTTSCEEEEEE
T ss_pred EEECCccccccccccccCCCCEEEEEECCCCc----------ccceEEeccC------CCCeEEEEEEEcCCCCEEEEEE
Confidence 22 1 13349999985541 1233333321 2456778999999999988875
Q ss_pred cC----CCcEEEEEeec
Q 001070 295 AK----KNAIYSVHLGY 307 (1165)
Q Consensus 295 ~~----r~aIYalhl~~ 307 (1165)
.+ .+.||.+-+.-
T Consensus 252 ~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp ECSSSSCCEEEEEEGGG
T ss_pred EccCCCccEEEEEECcc
Confidence 42 57899888764
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.03 E-value=0.035 Score=66.07 Aligned_cols=133 Identities=9% Similarity=0.097 Sum_probs=87.8
Q ss_pred ceEEEeecCCcEEEEeCcc-hhhH-hhcCCcc--------------------EEEeecC--CCceeEEecCCCCCCccee
Q 001070 158 HYVCYGLKGGNVRVLNLNT-ATRS-LLRGHTK--------------------IKIWEDS--KVAPLIILKPHGGQPVNSA 213 (1165)
Q Consensus 158 ~yIayG~kdg~IRVwdi~t-~ir~-llrGH~q--------------------VriWD~~--~g~pl~~lephdG~sV~SV 213 (1165)
.++++...++.|.|||.+| .+.. +-.|..- |.+||.. ++..+.++.. |.....+
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G~~P~~i 245 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GSEARSI 245 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--CSEEEEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--CCCCcee
Confidence 3445666789999999988 3433 3334221 8999985 7777777764 5567899
Q ss_pred EeecCC-CCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCC--------CCC-------------
Q 001070 214 QYLTAP-NQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSS--------AKP------------- 271 (1165)
Q Consensus 214 aFl~aP-~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s--------~~~------------- 271 (1165)
+| ++ .++|+++++++...+.+|.+||.++. +.++++..... .++
T Consensus 246 a~--s~~~~pDGk~l~v~n~~~~~v~ViD~~t~------------~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~ 311 (567)
T 1qks_A 246 ET--SKMEGWEDKYAIAGAYWPPQYVIMDGETL------------EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPE 311 (567)
T ss_dssp EE--CCSTTCTTTEEEEEEEETTEEEEEETTTC------------CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSE
T ss_pred EE--ccccCCCCCEEEEEEccCCeEEEEECCCC------------cEEEEEeccccccccccccCCCceEEEEEcCCCCE
Confidence 99 32 11355668888999999999996442 44444432100 000
Q ss_pred --------------------------ccccccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 272 --------------------------RVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 272 --------------------------~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
.....|...+.++|+++|+++|+...|.|+++-+.
T Consensus 312 ~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~ 372 (567)
T 1qks_A 312 FIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTK 372 (567)
T ss_dssp EEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred EEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECC
Confidence 01123555667899999999999999999997655
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.93 E-value=0.028 Score=66.91 Aligned_cols=93 Identities=13% Similarity=0.130 Sum_probs=54.5
Q ss_pred EEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCc-------------eEEEeEccCcCCCCCCCCC
Q 001070 188 IKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNR-------------EVKLWASASEEGWSLPTHA 254 (1165)
Q Consensus 188 VriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnr-------------tIKLW~~a~~~~~~~~~~~ 254 (1165)
|+|||..+|..+. .....+....+++| +|||.. |+. ++.++ .|++|++.++..
T Consensus 149 i~v~dl~tg~~~~-~~~~~~~~~~~~~w--spDg~~---l~~-~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~------- 214 (695)
T 2bkl_A 149 LHVIDVDSGEWSK-VDVIEGGKYATPKW--TPDSKG---FYY-EWLPTDPSIKVDERPGYTTIRYHTLGTEPS------- 214 (695)
T ss_dssp EEEEETTTCCBCS-SCCBSCCTTCCCEE--CTTSSE---EEE-EECCCCTTSCGGGGGGGCEEEEEETTSCGG-------
T ss_pred EEEEECCCCCCcC-CcccCcccccceEE--ecCCCE---EEE-EEecCCCCCccccCCCCCEEEEEECCCCch-------
Confidence 7777777776431 00111222378999 465533 443 33433 499999865521
Q ss_pred CCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccC---CCcEEEE
Q 001070 255 ESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAK---KNAIYSV 303 (1165)
Q Consensus 255 ~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~---r~aIYal 303 (1165)
.....++.+ ++..++..+..+|++++|+++... .+.||.+
T Consensus 215 ---~~~lv~~~~------~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~ 257 (695)
T 2bkl_A 215 ---KDTVVHERT------GDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWK 257 (695)
T ss_dssp ---GCEEEECCC------CCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEE
T ss_pred ---hceEEEecC------CCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEE
Confidence 222233321 245678899999999998876544 3578877
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=95.85 E-value=0.019 Score=63.27 Aligned_cols=98 Identities=10% Similarity=0.116 Sum_probs=63.6
Q ss_pred EEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeec---------CCCceEEEeEccCcCCCCCCCCCCCcc
Q 001070 188 IKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAG---------PLNREVKLWASASEEGWSLPTHAESWK 258 (1165)
Q Consensus 188 VriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsG---------slnrtIKLW~~a~~~~~~~~~~~~~w~ 258 (1165)
|++||..++..+.++..+ ... .++| +|++ ++|.++. ..+.+|.+||.+ .++
T Consensus 33 v~v~D~~t~~~~~~i~~g--~~p-~i~~--spdg---~~lyv~~~~~~~~~~g~~~~~v~v~d~~------------t~~ 92 (361)
T 2oiz_A 33 VHVYDYTNGKFLGMVPTA--FNG-HVQV--SNDG---KKIYTMTTYHERITRGKRSDVVEVWDAD------------KLT 92 (361)
T ss_dssp EEEEETTTCCEEEEEECC--EEE-EEEE--CTTS---SEEEEEEEEETTSSSSCEEEEEEEEETT------------TCC
T ss_pred EEEEECCCCeEEEEecCC--CCC-ceEE--CCCC---CEEEEEEecccccccCCCCCEEEEEECc------------CCc
Confidence 555555555555566543 223 8888 4554 4465543 457889999974 348
Q ss_pred eEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccC-CCcEEEEEeec
Q 001070 259 CTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAK-KNAIYSVHLGY 307 (1165)
Q Consensus 259 C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~-r~aIYalhl~~ 307 (1165)
+++++....... .+...-..++++|+++||+++|.. .+.|.++-+..
T Consensus 93 ~~~~i~~~~~~~--~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 93 FEKEISLPPKRV--QGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK 140 (361)
T ss_dssp EEEEEEECTTBC--CBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT
T ss_pred EEEEEEcCcccc--ccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCC
Confidence 899998642211 012333467899999999999986 68888886653
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.77 E-value=0.079 Score=53.75 Aligned_cols=129 Identities=13% Similarity=0.022 Sum_probs=78.7
Q ss_pred cEeeec--CceEEEeecCCcEEEEeCcchhhH-hh-cCCcc---------------------EEEeecCCCceeEEecCC
Q 001070 151 RQIAVN--KHYVCYGLKGGNVRVLNLNTATRS-LL-RGHTK---------------------IKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 151 R~IAVn--~~yIayG~kdg~IRVwdi~t~ir~-ll-rGH~q---------------------VriWD~~~g~pl~~leph 205 (1165)
+.|+++ |+.++....++.|++||..+..+. .. .+... |++||..++.... +...
T Consensus 111 ~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-~~~~ 189 (270)
T 1rwi_B 111 EGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-LPFT 189 (270)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-CCCS
T ss_pred cceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe-eccc
Confidence 457775 666666667889999987763222 11 12111 6677765543222 1111
Q ss_pred CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeec
Q 001070 206 GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS 285 (1165)
Q Consensus 206 dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p 285 (1165)
....+++++| .++| . |.++...++.|.+|+..+.. +.. +.. .+-.....+++++
T Consensus 190 ~~~~p~~i~~--d~~g---~-l~v~~~~~~~v~~~~~~~~~------------~~~-~~~-------~~~~~p~~i~~~~ 243 (270)
T 1rwi_B 190 DITAPWGIAV--DEAG---T-VYVTEHNTNQVVKLLAGSTT------------STV-LPF-------TGLNTPLAVAVDS 243 (270)
T ss_dssp SCCSEEEEEE--CTTC---C-EEEEETTTSCEEEECTTCSC------------CEE-CCC-------CSCSCEEEEEECT
T ss_pred CCCCceEEEE--CCCC---C-EEEEECCCCcEEEEcCCCCc------------cee-ecc-------CCCCCceeEEECC
Confidence 1246888888 4444 3 44456678899999975431 111 111 1124456889999
Q ss_pred CCcEEEEeccCCCcEEEEEeec
Q 001070 286 QAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 286 ~a~~ilLan~~r~aIYalhl~~ 307 (1165)
++. |++++...+.|+.+.+..
T Consensus 244 ~g~-l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 244 DRT-VYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp TCC-EEEEEGGGTEEEEECCCG
T ss_pred CCC-EEEEECCCCEEEEEcCCC
Confidence 986 888999999999987765
No 190
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.74 E-value=0.14 Score=53.03 Aligned_cols=31 Identities=19% Similarity=0.298 Sum_probs=26.3
Q ss_pred ccEEEEEee----cCCcEEEEeccCCCcEEEEEee
Q 001070 276 AFFNQVVVL----SQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 276 aff~sV~~~----p~a~~ilLan~~r~aIYalhl~ 306 (1165)
...+.++++ |++++|++++...+.||.+.+.
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 345677888 9999999999999999999876
No 191
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.74 E-value=0.071 Score=60.18 Aligned_cols=134 Identities=6% Similarity=0.092 Sum_probs=79.5
Q ss_pred eeec--CceEEEeecCCcEEEEeCcc-hhhHhhcCCc----------------------cEEEeecCCCceeEEe---cC
Q 001070 153 IAVN--KHYVCYGLKGGNVRVLNLNT-ATRSLLRGHT----------------------KIKIWEDSKVAPLIIL---KP 204 (1165)
Q Consensus 153 IAVn--~~yIayG~kdg~IRVwdi~t-~ir~llrGH~----------------------qVriWD~~~g~pl~~l---ep 204 (1165)
||+| |+.++....++.||+||.++ .++.++.+.. .|.+||...+..+.++ .+
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~ 215 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGS 215 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCT
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccc
Confidence 6774 67666666789999999986 5544433211 2555554444322333 23
Q ss_pred CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEee
Q 001070 205 HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVL 284 (1165)
Q Consensus 205 hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~ 284 (1165)
+.+..+.+++| .|+ ++.+++ ...+.+|..|+..++ .+ .++........ ....-++.++++
T Consensus 216 ~~~~~p~~iav--~p~--~g~lyv--~d~~~~I~~~d~~~~------------~~-~~~~~~~~~g~-~~~~P~~~ia~~ 275 (409)
T 3hrp_A 216 TFSGKIGAVAL--DET--EEWLYF--VDSNKNFGRFNVKTQ------------EV-TLIKQLELSGS-LGTNPGPYLIYY 275 (409)
T ss_dssp TSCSCCCBCEE--CTT--SSEEEE--ECTTCEEEEEETTTC------------CE-EEEEECCCCSC-CCCSSCCEEEEE
T ss_pred hhcCCcEEEEE--eCC--CCeEEE--EECCCcEEEEECCCC------------CE-EEEecccccCC-CCCCccccEEEe
Confidence 24567888999 443 234344 345889999998654 22 22211100000 001112388999
Q ss_pred cCCcEEEEeccCCCcEEEEEee
Q 001070 285 SQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 285 p~a~~ilLan~~r~aIYalhl~ 306 (1165)
|+.+.|+++|...+.||.+..+
T Consensus 276 p~~g~lyv~d~~~~~I~~~~~~ 297 (409)
T 3hrp_A 276 FVDSNFYMSDQNLSSVYKITPD 297 (409)
T ss_dssp TTTTEEEEEETTTTEEEEECTT
T ss_pred CCCCEEEEEeCCCCEEEEEecC
Confidence 9999999999999999998543
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.71 E-value=0.031 Score=66.54 Aligned_cols=135 Identities=13% Similarity=0.128 Sum_probs=85.5
Q ss_pred ccccEeeecCceEEEeecCC----cEEEEeCcc-hhhHhhcCCc-----------------------cEEEeecCCCce-
Q 001070 148 LIGRQIAVNKHYVCYGLKGG----NVRVLNLNT-ATRSLLRGHT-----------------------KIKIWEDSKVAP- 198 (1165)
Q Consensus 148 ~~GR~IAVn~~yIayG~kdg----~IRVwdi~t-~ir~llrGH~-----------------------qVriWD~~~g~p- 198 (1165)
..+=.++-||+||+++..++ .|++||..+ ..+.|..++. .|++||..++.+
T Consensus 229 ~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~ 308 (695)
T 2bkl_A 229 FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARA 308 (695)
T ss_dssp EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGG
T ss_pred EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCcc
Confidence 33334666899999988776 788888755 4443332221 178888877654
Q ss_pred -eEEecCCC-CCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccc
Q 001070 199 -LIILKPHG-GQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEA 276 (1165)
Q Consensus 199 -l~~lephd-G~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~a 276 (1165)
...+-+|+ +..|.+++|. +.. |+.++..|...+||..... +.+.++|.++ +..
T Consensus 309 ~~~~l~~~~~~~~l~~~~~~------~~~-lv~~~~~dg~~~l~~~~~~-----------g~~~~~l~~~-------~~~ 363 (695)
T 2bkl_A 309 SWKEIVPEDSSASLLSVSIV------GGH-LSLEYLKDATSEVRVATLK-----------GKPVRTVQLP-------GVG 363 (695)
T ss_dssp GCEEEECCCSSCEEEEEEEE------TTE-EEEEEEETTEEEEEEEETT-----------CCEEEECCCS-------SSS
T ss_pred CCeEEecCCCCCeEEEEEEE------CCE-EEEEEEECCEEEEEEEeCC-----------CCeeEEecCC-------CCe
Confidence 35555554 5678899994 223 5556788889999987532 2577777762 234
Q ss_pred cEEEEEeecCCcEEEEecc---CCCcEEEEEeec
Q 001070 277 FFNQVVVLSQAGLLLFANA---KKNAIYSVHLGY 307 (1165)
Q Consensus 277 ff~sV~~~p~a~~ilLan~---~r~aIYalhl~~ 307 (1165)
.+..+..+|++..|+++-. .-..||.+.+.-
T Consensus 364 ~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 364 AASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp EECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 4556677788876665432 234677776653
No 193
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.70 E-value=0.047 Score=65.62 Aligned_cols=130 Identities=11% Similarity=0.078 Sum_probs=83.1
Q ss_pred EeeecCceEEEeecCC-----cEEEEeCcch----hhHhhcCCcc------------------------EEEeecCCC-c
Q 001070 152 QIAVNKHYVCYGLKGG-----NVRVLNLNTA----TRSLLRGHTK------------------------IKIWEDSKV-A 197 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg-----~IRVwdi~t~----ir~llrGH~q------------------------VriWD~~~g-~ 197 (1165)
.++-||+||++...++ .|++||+++. .+.|..++.. |.+||..++ .
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 353 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTP 353 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSC
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCcc
Confidence 3556899999988765 8999999763 3444333221 777887764 2
Q ss_pred eeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcccccc
Q 001070 198 PLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAF 277 (1165)
Q Consensus 198 pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~af 277 (1165)
....+-++....+.+++|. +.. |+.++..|...+||..... +.+.++|.+. +...
T Consensus 354 ~~~~l~~~~~~~l~~~~~~------~~~-lv~~~~~dg~~~l~~~~~~-----------g~~~~~l~~~-------~~~~ 408 (741)
T 1yr2_A 354 RFDTVVPESKDNLESVGIA------GNR-LFASYIHDAKSQVLAFDLD-----------GKPAGAVSLP-------GIGS 408 (741)
T ss_dssp EEEEEECCCSSEEEEEEEE------BTE-EEEEEEETTEEEEEEEETT-----------SCEEEECBCS-------SSCE
T ss_pred ccEEEecCCCCeEEEEEEE------CCE-EEEEEEECCEEEEEEEeCC-----------CCceeeccCC-------CCeE
Confidence 3444546644467778883 223 5556777888888876432 2577777762 2345
Q ss_pred EEEEEeecCCcEEEEe---ccCCCcEEEEEee
Q 001070 278 FNQVVVLSQAGLLLFA---NAKKNAIYSVHLG 306 (1165)
Q Consensus 278 f~sV~~~p~a~~ilLa---n~~r~aIYalhl~ 306 (1165)
+..+..+|++..|+++ ...-..||.+.+.
T Consensus 409 v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 409 ASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp EEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred EEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 6677888998866654 2334568877664
No 194
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.39 E-value=0.064 Score=64.25 Aligned_cols=132 Identities=11% Similarity=0.149 Sum_probs=73.7
Q ss_pred EeeecCceEEEee-----cCCcEEEEeCcc-h-hhHhhcCC--------------------------------ccEEEee
Q 001070 152 QIAVNKHYVCYGL-----KGGNVRVLNLNT-A-TRSLLRGH--------------------------------TKIKIWE 192 (1165)
Q Consensus 152 ~IAVn~~yIayG~-----kdg~IRVwdi~t-~-ir~llrGH--------------------------------~qVriWD 192 (1165)
.++-||++|||+. ++..|||||+.| . ++..+.+. .+|++|+
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~ 214 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHR 214 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEETTTEEEEEESSCCC-------CCCCEEEEEE
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEeCCCEEEEEEecCcccccccccCCCcEEEEEE
Confidence 3666899999854 346899999997 3 22223222 1156666
Q ss_pred cCCCc--eeEEecCCC--CCCcceeEeecCCCCCCceEEE-ee--cCCCceEEEeEccCcCCCCCCCCCCCcceEEEEec
Q 001070 193 DSKVA--PLIILKPHG--GQPVNSAQYLTAPNQAGHIILV-TA--GPLNREVKLWASASEEGWSLPTHAESWKCTQTLDL 265 (1165)
Q Consensus 193 ~~~g~--pl~~lephd--G~sV~SVaFl~aP~~~d~~~lv-ts--GslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~ 265 (1165)
..++. ...+++..+ ...+.++.| +|||. +|+ ++ +..+.+|.+|+++.+. .+.++|..
T Consensus 215 lgt~~~~~~~v~~~~~~~~~~~~~~~~--SpDg~---~l~~~~~~~~~~~~i~~~d~~~~~-----------~~~~~l~~ 278 (693)
T 3iuj_A 215 LGTAQEDDRLVFGAIPAQHHRYVGATV--TEDDR---FLLISAANSTSGNRLYVKDLSQEN-----------APLLTVQG 278 (693)
T ss_dssp TTSCGGGCEEEESCSGGGCCSEEEEEE--CTTSC---EEEEEEESSSSCCEEEEEETTSTT-----------CCCEEEEC
T ss_pred CCCCcccceEEEecCCCCCeEEEEEEE--cCCCC---EEEEEEccCCCCcEEEEEECCCCC-----------CceEEEeC
Confidence 55432 234444322 124567888 56654 343 22 3344699999986652 13344442
Q ss_pred cCCCCCccccccEEEEEeecCCc-EEEEeccC--CCcEEEEEeecC
Q 001070 266 KSSAKPRVEEAFFNQVVVLSQAG-LLLFANAK--KNAIYSVHLGYG 308 (1165)
Q Consensus 266 ~~s~~~~~~~aff~sV~~~p~a~-~ilLan~~--r~aIYalhl~~g 308 (1165)
. .+..+ .+ ++++++ |++++|.. +..||.+.++.+
T Consensus 279 ~-------~~~~~-~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~ 315 (693)
T 3iuj_A 279 D-------LDADV-SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANP 315 (693)
T ss_dssp S-------SSSCE-EE-EEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred C-------CCceE-EE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 1 11222 22 345555 66677654 567999988753
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.31 E-value=0.16 Score=52.58 Aligned_cols=94 Identities=6% Similarity=0.050 Sum_probs=60.9
Q ss_pred EEEeecC-CCc-----eeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEE
Q 001070 188 IKIWEDS-KVA-----PLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQ 261 (1165)
Q Consensus 188 VriWD~~-~g~-----pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~Q 261 (1165)
|++||.. +|. .+..+..+....+..++| .++| .++| +...+..|..|+..++ +++.
T Consensus 200 i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~--d~~G---~l~v-~~~~~~~i~~~d~~~g------------~~~~ 261 (314)
T 1pjx_A 200 LWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF--DEDN---NLLV-ANWGSSHIEVFGPDGG------------QPKM 261 (314)
T ss_dssp EEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE--BTTC---CEEE-EEETTTEEEEECTTCB------------SCSE
T ss_pred EEEEECCCCCccccceEEEECCCCCCCCCCceEE--CCCC---CEEE-EEcCCCEEEEEcCCCC------------cEeE
Confidence 7777765 342 122232221034677888 3443 4345 4445778999996433 5556
Q ss_pred EEeccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 262 TLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 262 TLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
++.+ +..+...+++++++++|++++...+.||.+.+..
T Consensus 262 ~~~~--------~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 262 RIRC--------PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEC--------SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEeC--------CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 6664 2356678889999999999999889999998864
No 196
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.22 E-value=0.2 Score=52.85 Aligned_cols=134 Identities=7% Similarity=0.077 Sum_probs=79.1
Q ss_pred ccccEeeec---CceEEEeecCCcEEEEeCcc-hhhHh-hcCC-----------------ccEEEeecCCCceeEEecCC
Q 001070 148 LIGRQIAVN---KHYVCYGLKGGNVRVLNLNT-ATRSL-LRGH-----------------TKIKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 148 ~~GR~IAVn---~~yIayG~kdg~IRVwdi~t-~ir~l-lrGH-----------------~qVriWD~~~g~pl~~leph 205 (1165)
.+|...+.+ ++.++....++.|.+||.++ ..+.+ +.++ ..|.+||..+|.........
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~~~~~~ 92 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVATIGTKFCALNWKEQSAVVLATVD 92 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEEETTEEEEEETTTTEEEEEEECC
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEEECCeEEEEECCCCcEEEEEecC
Confidence 344454432 45556677788888888776 22211 1111 11788888777532222222
Q ss_pred CC---CCcceeEeecCCCCCCceEEEeecCC--------CceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccc
Q 001070 206 GG---QPVNSAQYLTAPNQAGHIILVTAGPL--------NREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVE 274 (1165)
Q Consensus 206 dG---~sV~SVaFl~aP~~~d~~~lvtsGsl--------nrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~ 274 (1165)
.+ ..++.++| .|+| ++++++... ..+-+||.++.. | +....+. .
T Consensus 93 ~~~~~~~~~di~~--d~dG---~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g----------~~~~~~~---------~ 147 (297)
T 3g4e_A 93 NDKKNNRFNDGKV--DPAG---RYFAGTMAEETAPAVLERHQGALYSLFPD-H----------HVKKYFD---------Q 147 (297)
T ss_dssp TTCSSEEEEEEEE--CTTS---CEEEEEEECCSBTTBCCTTCEEEEEECTT-S----------CEEEEEE---------E
T ss_pred CCCCCCCCCCEEE--CCCC---CEEEecCCcccccccccCCCcEEEEEECC-C----------CEEEEee---------c
Confidence 22 35788888 4544 445643221 245678877442 1 2222222 2
Q ss_pred cccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 275 EAFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 275 ~aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
-.+-|.++++|++++|++++...+.||++.+.
T Consensus 148 ~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 148 VDISNGLDWSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp ESBEEEEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred cccccceEEcCCCCEEEEecCCCCcEEEEecc
Confidence 34667899999999999999999999998875
No 197
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.02 E-value=0.3 Score=57.32 Aligned_cols=130 Identities=13% Similarity=0.233 Sum_probs=88.7
Q ss_pred ecCceE-EEeecCCcEEEEeCcch-----hhHhh------c--C----Cc----------------------cEEEeecC
Q 001070 155 VNKHYV-CYGLKGGNVRVLNLNTA-----TRSLL------R--G----HT----------------------KIKIWEDS 194 (1165)
Q Consensus 155 Vn~~yI-ayG~kdg~IRVwdi~t~-----ir~ll------r--G----H~----------------------qVriWD~~ 194 (1165)
.+++|| +.|++++.|.|+|.++. +...+ + | |+ .|-+.|..
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECC
Confidence 444444 56999999999999753 11111 1 2 21 17778888
Q ss_pred CCceeEEecCCCCC--CcceeEeecCCCCCCceEEEeec------------------CCCceEEEeEccCcCCCCCCCCC
Q 001070 195 KVAPLIILKPHGGQ--PVNSAQYLTAPNQAGHIILVTAG------------------PLNREVKLWASASEEGWSLPTHA 254 (1165)
Q Consensus 195 ~g~pl~~lephdG~--sV~SVaFl~aP~~~d~~~lvtsG------------------slnrtIKLW~~a~~~~~~~~~~~ 254 (1165)
++..+.+|+...|. --|.+.|. ++++.+++|- ..+.+|.+||++.+
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~-----p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~--------- 238 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWN-----LPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR--------- 238 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEE-----TTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT---------
T ss_pred CCeEEEEEccCCCCccccceEEEC-----CCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC---------
Confidence 88889999754232 24566663 5556688873 45799999998543
Q ss_pred CCcceEEEEeccCCCCCccccccEEEE--EeecCCcEEEEecc-----CCCcEEEEEeec
Q 001070 255 ESWKCTQTLDLKSSAKPRVEEAFFNQV--VVLSQAGLLLFANA-----KKNAIYSVHLGY 307 (1165)
Q Consensus 255 ~~w~C~QTLe~~~s~~~~~~~aff~sV--~~~p~a~~ilLan~-----~r~aIYalhl~~ 307 (1165)
+-++|+.... ....-.++ +++|++.++.+++. -.+.|++++.+.
T Consensus 239 ---k~~~tI~vg~------~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~ 289 (462)
T 2ece_A 239 ---KRIHSLTLGE------ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED 289 (462)
T ss_dssp ---EEEEEEESCT------TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET
T ss_pred ---cEeeEEecCC------CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC
Confidence 7788988621 11233344 55999999999999 999999998874
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=94.99 E-value=0.087 Score=63.36 Aligned_cols=118 Identities=13% Similarity=0.104 Sum_probs=65.8
Q ss_pred EeeecCceEEEeecCCcEEEEeCcchhhHhhcCC--ccEEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEe
Q 001070 152 QIAVNKHYVCYGLKGGNVRVLNLNTATRSLLRGH--TKIKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVT 229 (1165)
Q Consensus 152 ~IAVn~~yIayG~kdg~IRVwdi~t~ir~llrGH--~qVriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvt 229 (1165)
.++-||++|||++.++ |. .+|+|||..+|..+.. ..+ +-.+.+++| +|| .+. +.+
T Consensus 169 ~~SPDG~~la~~~~~~----------------G~e~~~i~v~dl~tg~~~~~-~~~-~~~~~~~~w--spD--~~l-~~~ 225 (741)
T 1yr2_A 169 AASDDGRLLAYSVQDG----------------GSDWRTVKFVGVADGKPLAD-ELK-WVKFSGLAW--LGN--DAL-LYS 225 (741)
T ss_dssp EECTTSSEEEEEEEET----------------TCSEEEEEEEETTTCCEEEE-EEE-EEESCCCEE--STT--SEE-EEE
T ss_pred EECCCCCEEEEEEcCC----------------CCceEEEEEEECCCCCCCCc-cCC-CceeccEEE--ECC--CEE-EEE
Confidence 3566899999987641 11 1255555555543322 111 113467788 455 222 232
Q ss_pred ecCC------------CceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccC-
Q 001070 230 AGPL------------NREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAK- 296 (1165)
Q Consensus 230 sGsl------------nrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~- 296 (1165)
+... +..|++|++.++. ......++.. ++..|+..+.++||+++|+++...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~v~~~~lgt~~----------~~~~lv~~~~------~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 226 RFAEPKEGQAFQALNYNQTVWLHRLGTPQ----------SADQPVFATP------ELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp ECCCC--------CCCCCEEEEEETTSCG----------GGCEEEECCT------TCTTCEEEEEECTTSCEEEEEEECT
T ss_pred EecCcccccccccCCCCCEEEEEECCCCc----------hhCEEEeccC------CCCeEEEEEEECCCCCEEEEEEEcc
Confidence 2211 4458899985431 1122223321 234578899999999988876543
Q ss_pred ---CCcEEEEEeecC
Q 001070 297 ---KNAIYSVHLGYG 308 (1165)
Q Consensus 297 ---r~aIYalhl~~g 308 (1165)
.+.||.+.+.-+
T Consensus 290 ~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 290 TDPVNTVHVARVTNG 304 (741)
T ss_dssp TCSCCEEEEEEEETT
T ss_pred CCCcceEEEEECCCC
Confidence 568999988754
No 199
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=94.94 E-value=0.36 Score=52.24 Aligned_cols=133 Identities=10% Similarity=0.089 Sum_probs=77.1
Q ss_pred cCCcEEEEeCcchhhHhhcCCccEEEeecCCCceeEEecCCC-----CCCcceeEeecCCCCCCceEEEeecC---CCce
Q 001070 165 KGGNVRVLNLNTATRSLLRGHTKIKIWEDSKVAPLIILKPHG-----GQPVNSAQYLTAPNQAGHIILVTAGP---LNRE 236 (1165)
Q Consensus 165 kdg~IRVwdi~t~ir~llrGH~qVriWD~~~g~pl~~lephd-----G~sV~SVaFl~aP~~~d~~~lvtsGs---lnrt 236 (1165)
.+|.+-|.|+...+ .+..+|.+||..+|..+.++.-+. +..++.++| .|++ +.++|+ .+ .+.+
T Consensus 76 ~~g~L~v~D~g~~~----~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~v--d~~~--g~~yvt-d~~~~~~~~ 146 (343)
T 2qe8_A 76 GNGIVWMLDNGNQS----KSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAV--DLIH--NFVYIS-DPAPDDKAA 146 (343)
T ss_dssp SSSEEEEEECHHHH----TSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEE--ETTT--TEEEEE-ECCSGGGCE
T ss_pred CCCcEEEEcCCCCc----CCCCeEEEEECCCCeEEEEEECChhhcccccccceEEE--ecCC--CEEEEE-cCccCCCCe
Confidence 46777777765311 233348889988887777775321 235788999 3433 243454 44 7899
Q ss_pred EEEeEccCcCCCCCCCCCCCcce---E-----EEEeccCCCCCcc--ccccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 237 VKLWASASEEGWSLPTHAESWKC---T-----QTLDLKSSAKPRV--EEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 237 IKLW~~a~~~~~~~~~~~~~w~C---~-----QTLe~~~s~~~~~--~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
|.+||+..++-|..-.......+ . +.|...+.. .+. -....+.++++|++++|.+++...+.||++...
T Consensus 147 i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~-g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~ 225 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPD-GTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSA 225 (343)
T ss_dssp EEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTT-SCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHH
T ss_pred EEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCC-CceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHH
Confidence 99999876543321111000000 0 000000000 000 012357899999999999999999999999875
Q ss_pred c
Q 001070 307 Y 307 (1165)
Q Consensus 307 ~ 307 (1165)
.
T Consensus 226 ~ 226 (343)
T 2qe8_A 226 D 226 (343)
T ss_dssp H
T ss_pred H
Confidence 4
No 200
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.92 E-value=0.15 Score=53.16 Aligned_cols=124 Identities=7% Similarity=0.025 Sum_probs=71.5
Q ss_pred Eeee--cCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc------------------E----------------------
Q 001070 152 QIAV--NKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK------------------I---------------------- 188 (1165)
Q Consensus 152 ~IAV--n~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q------------------V---------------------- 188 (1165)
.|++ ||++++....++.|.+||.++ .++.++.++.. |
T Consensus 73 ~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~ 152 (296)
T 3e5z_A 73 GHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPG 152 (296)
T ss_dssp EEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSS
T ss_pred eeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCC
Confidence 4665 577777666678999999965 54444332111 2
Q ss_pred -EEeecCC-CceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcce---EEEE
Q 001070 189 -KIWEDSK-VAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKC---TQTL 263 (1165)
Q Consensus 189 -riWD~~~-g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C---~QTL 263 (1165)
+||.... |. +..+..+ ...++.++| .|+ ++.| .++..+.+|.+|++... | .+ ..++
T Consensus 153 ~~l~~~~~~g~-~~~~~~~-~~~~~gi~~--s~d---g~~l-v~~~~~~~i~~~~~~~~-g----------~~~~~~~~~ 213 (296)
T 3e5z_A 153 RWVFRLAPDGT-LSAPIRD-RVKPNGLAF--LPS---GNLL-VSDTGDNATHRYCLNAR-G----------ETEYQGVHF 213 (296)
T ss_dssp CEEEEECTTSC-EEEEECC-CSSEEEEEE--CTT---SCEE-EEETTTTEEEEEEECSS-S----------CEEEEEEEE
T ss_pred cEEEEECCCCC-EEEeecC-CCCCccEEE--CCC---CCEE-EEeCCCCeEEEEEECCC-C----------cCcCCCeEe
Confidence 3333322 22 2233222 236788888 344 4556 56888999999998521 1 33 3333
Q ss_pred eccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEe
Q 001070 264 DLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 264 e~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl 305 (1165)
.+ +..+...+++++++.+++ ++ .+.||.+..
T Consensus 214 ~~--------~~~~p~~i~~d~~G~l~v-~~--~~~v~~~~~ 244 (296)
T 3e5z_A 214 TV--------EPGKTDGLRVDAGGLIWA-SA--GDGVHVLTP 244 (296)
T ss_dssp CC--------SSSCCCSEEEBTTSCEEE-EE--TTEEEEECT
T ss_pred eC--------CCCCCCeEEECCCCCEEE-Ec--CCeEEEECC
Confidence 11 123444688999998544 44 567777653
No 201
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.78 E-value=0.42 Score=51.47 Aligned_cols=122 Identities=13% Similarity=0.152 Sum_probs=71.5
Q ss_pred ceEEEeecCCcEEEEeCcc-hhhHh-hcCC-----------------ccEEEeecCCCceeEEecCC-C---CCCcceeE
Q 001070 158 HYVCYGLKGGNVRVLNLNT-ATRSL-LRGH-----------------TKIKIWEDSKVAPLIILKPH-G---GQPVNSAQ 214 (1165)
Q Consensus 158 ~yIayG~kdg~IRVwdi~t-~ir~l-lrGH-----------------~qVriWD~~~g~pl~~leph-d---G~sV~SVa 214 (1165)
..+.++..++.|.+||.++ .++.+ +.++ ..|.+||..+|.. ..+... . +..+++++
T Consensus 62 ~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~-~~~~~~~~~~~~~~~~~i~ 140 (326)
T 2ghs_A 62 TAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIASDDGLFLRDTATGVL-TLHAELESDLPGNRSNDGR 140 (326)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEETTEEEEEETTTCCE-EEEECSSTTCTTEEEEEEE
T ss_pred EEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEECCCEEEEECCCCcE-EEEeeCCCCCCCCCCCCEE
Confidence 4445566677777777765 22211 1010 0177888777763 333221 1 23678888
Q ss_pred eecCCCCCCceEEEeecCC---CceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEE
Q 001070 215 YLTAPNQAGHIILVTAGPL---NREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLL 291 (1165)
Q Consensus 215 Fl~aP~~~d~~~lvtsGsl---nrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~il 291 (1165)
| .|+| ++++++... ....+||.+. . | ++..... +..+.+.++++|++++|.
T Consensus 141 ~--d~~G---~l~v~~~~~~~~~~~~~l~~~~-~-g----------~~~~~~~---------~~~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 141 M--HPSG---ALWIGTMGRKAETGAGSIYHVA-K-G----------KVTKLFA---------DISIPNSICFSPDGTTGY 194 (326)
T ss_dssp E--CTTS---CEEEEEEETTCCTTCEEEEEEE-T-T----------EEEEEEE---------EESSEEEEEECTTSCEEE
T ss_pred E--CCCC---CEEEEeCCCcCCCCceEEEEEe-C-C----------cEEEeeC---------CCcccCCeEEcCCCCEEE
Confidence 8 4554 445543211 2356777764 2 1 2222111 224567889999999999
Q ss_pred EeccCCCcEEEEEee
Q 001070 292 FANAKKNAIYSVHLG 306 (1165)
Q Consensus 292 Lan~~r~aIYalhl~ 306 (1165)
+++...+.||++.++
T Consensus 195 v~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEETTTCEEEEEEBC
T ss_pred EEECCCCEEEEEEcc
Confidence 999999999999875
No 202
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.78 E-value=0.31 Score=53.13 Aligned_cols=144 Identities=6% Similarity=-0.016 Sum_probs=92.2
Q ss_pred cccccEeeecCceEEEee-cCCcEEEEeCcc-hhhHhh-cC-Ccc------------------EEEeecCCCceeEEecC
Q 001070 147 LLIGRQIAVNKHYVCYGL-KGGNVRVLNLNT-ATRSLL-RG-HTK------------------IKIWEDSKVAPLIILKP 204 (1165)
Q Consensus 147 ~~~GR~IAVn~~yIayG~-kdg~IRVwdi~t-~ir~ll-rG-H~q------------------VriWD~~~g~pl~~lep 204 (1165)
.+.|-.|+++|+.|..+. +++.|-|+|.+| .+...+ -| -+. |.++|..+...+.++.-
T Consensus 65 ~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 65 SYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp TCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 345566888887665544 479999999998 444434 34 112 66777766655555443
Q ss_pred C-CCCC---cceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCC-----CCCcccc
Q 001070 205 H-GGQP---VNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSS-----AKPRVEE 275 (1165)
Q Consensus 205 h-dG~s---V~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s-----~~~~~~~ 275 (1165)
. +|++ ++.+.|. +++..+ .--...+|-+-|. .+++++.++.+..- .......
T Consensus 145 g~~~~p~~~~nele~~------dg~lyv-n~~~~~~V~vID~------------~tg~V~~~I~~~g~~~~~~~~~~~~~ 205 (266)
T 2iwa_A 145 KYNGHRVIRLNELEYI------NGEVWA-NIWQTDCIARISA------------KDGTLLGWILLPNLRKKLIDEGFRDI 205 (266)
T ss_dssp EETTEECCCEEEEEEE------TTEEEE-EETTSSEEEEEET------------TTCCEEEEEECHHHHHHHHHTTCTTC
T ss_pred CCCCcccccceeEEEE------CCEEEE-ecCCCCeEEEEEC------------CCCcEEEEEECCCccccccccccccc
Confidence 2 2333 3455663 223233 3334456666665 44599999997421 0111224
Q ss_pred ccEEEEEeecCCcEEEEeccCCCcEEEEEeecCC
Q 001070 276 AFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGN 309 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r~aIYalhl~~g~ 309 (1165)
+..|-++++|+++.+++++..-+.||.|.+....
T Consensus 206 ~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 206 DVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp CCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred CceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 6788999999999999999999999999998753
No 203
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=94.30 E-value=0.21 Score=58.71 Aligned_cols=106 Identities=11% Similarity=0.235 Sum_probs=75.1
Q ss_pred EEEeecCCCceeEEecCC-CCCCcceeEeecCCCCCCceEEEeecC-----CCceEEEeEccCcCCCCCCCCCCCcceEE
Q 001070 188 IKIWEDSKVAPLIILKPH-GGQPVNSAQYLTAPNQAGHIILVTAGP-----LNREVKLWASASEEGWSLPTHAESWKCTQ 261 (1165)
Q Consensus 188 VriWD~~~g~pl~~leph-dG~sV~SVaFl~aP~~~d~~~lvtsGs-----lnrtIKLW~~a~~~~~~~~~~~~~w~C~Q 261 (1165)
|.|||..++..+.++.-. .|.-..-+.|+..|++. ++.++.. ++.+|-+|.... ..|.-.|
T Consensus 230 V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~---~aYV~~e~~~~~Lss~V~v~~~d~----------g~~~~~~ 296 (462)
T 2ece_A 230 IHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKL---MGFINMVVSLKDLSSSIWLWFYED----------GKWNAEK 296 (462)
T ss_dssp EEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCC---EEEEEEEEETTTCCEEEEEEEEET----------TEEEEEE
T ss_pred EEEEECCCCcEeeEEecCCCCCccceeEeeECCCCC---EEEEEEeeeccCCCceEEEEEecC----------CceeEEE
Confidence 889999888777777653 34455667776566664 4666677 999999988743 3478888
Q ss_pred EEeccCCC-C---C---c---cccccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 262 TLDLKSSA-K---P---R---VEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 262 TLe~~~s~-~---~---~---~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
++...... . + . +.......+.++||++||.+||.-.+.|-++.+.
T Consensus 297 vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 297 VIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred EEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 88753321 0 0 0 0013455678999999999999999999998886
No 204
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=94.15 E-value=0.011 Score=65.54 Aligned_cols=86 Identities=10% Similarity=0.057 Sum_probs=48.9
Q ss_pred eeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc---------------------EEEeecCCCceeEEecCCCCCCc
Q 001070 153 IAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK---------------------IKIWEDSKVAPLIILKPHGGQPV 210 (1165)
Q Consensus 153 IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q---------------------VriWD~~~g~pl~~lephdG~sV 210 (1165)
.+|++.+|+.|..||.|+.||..+ .++..+++ .. |+.||..+|..+.+|+-+.+..+
T Consensus 5 P~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 5 VTLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp ---CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred CeeeCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 467888999999999999999887 55443333 11 88999888887778865433333
Q ss_pred ceeEeecCCCCCCceEEEeecCCCceEEEeEccCc
Q 001070 211 NSAQYLTAPNQAGHIILVTAGPLNREVKLWASASE 245 (1165)
Q Consensus 211 ~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~ 245 (1165)
.+..++ . .+.. ++ .|+.|.+|..||..++
T Consensus 84 ~~sp~~---~-~~~~-v~-~g~~dg~v~a~D~~tG 112 (369)
T 2hz6_A 84 QASPCR---S-SDGI-LY-MGKKQDIWYVIDLLTG 112 (369)
T ss_dssp TTCSCC----------CC-CCEEEEEEEEECCC--
T ss_pred ccCceE---e-cCCE-EE-EEeCCCEEEEEECCCC
Confidence 222111 0 1223 33 4778999999998665
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.96 E-value=0.85 Score=51.39 Aligned_cols=78 Identities=9% Similarity=-0.017 Sum_probs=49.8
Q ss_pred CcceeEeecCCCCCCceEEEeecC-CCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCC----c---cccccEEE
Q 001070 209 PVNSAQYLTAPNQAGHIILVTAGP-LNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKP----R---VEEAFFNQ 280 (1165)
Q Consensus 209 sV~SVaFl~aP~~~d~~~lvtsGs-lnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~----~---~~~aff~s 280 (1165)
..+.++| .|+ +.++| +.. .|++|+.|++..+ . +.|+-+...... . ..-..-..
T Consensus 324 ~P~gia~--d~d---G~lyv-ad~~~~~~I~~~~~~~G------------~-v~~~~g~~~~~g~~~g~~~~~~~~~P~g 384 (409)
T 3hrp_A 324 QPNGMTV--DED---GNFYI-VDGFKGYCLRKLDILDG------------Y-VSTVAGQVDVASQIDGTPLEATFNYPYD 384 (409)
T ss_dssp SEEEEEE--CTT---CCEEE-EETTTTCEEEEEETTTT------------E-EEEEEECTTCBSCCCBSTTTCCBSSEEE
T ss_pred CCeEEEE--eCC---CCEEE-EeCCCCCEEEEEECCCC------------E-EEEEeCCCCCCCcCCCChhceEeCCceE
Confidence 4677888 344 45344 577 8999999996433 1 234443311100 0 01124567
Q ss_pred EEeecCCcEEEEeccCCCcEEEEEee
Q 001070 281 VVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 281 V~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
++++++ +.|++||...+.|..+.++
T Consensus 385 iavd~~-g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 385 ICYDGE-GGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEECSS-SEEEEEESTTCEEEEEEEC
T ss_pred EEEcCC-CCEEEEECCCCeEEEEEeC
Confidence 899999 8899999999999998764
No 206
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.95 E-value=0.84 Score=49.91 Aligned_cols=142 Identities=12% Similarity=0.108 Sum_probs=94.5
Q ss_pred cccccEeeecCceEEE-eecCCcEEEEeCcc-hhhHhhc-CCcc------------------EEEeecCCCceeEEecCC
Q 001070 147 LLIGRQIAVNKHYVCY-GLKGGNVRVLNLNT-ATRSLLR-GHTK------------------IKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 147 ~~~GR~IAVn~~yIay-G~kdg~IRVwdi~t-~ir~llr-GH~q------------------VriWD~~~g~pl~~leph 205 (1165)
-+.|-.|+++|..|-- .-+++.|.|||.+| .+...|. +-+. |.++|..+...+.+++-.
T Consensus 86 ~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~ 165 (262)
T 3nol_A 86 RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVT 165 (262)
T ss_dssp TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECE
T ss_pred ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEec
Confidence 4456668887665533 33589999999998 4443332 1121 888888887766666543
Q ss_pred -CCCCcc---eeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCC----Ccccccc
Q 001070 206 -GGQPVN---SAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAK----PRVEEAF 277 (1165)
Q Consensus 206 -dG~sV~---SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~----~~~~~af 277 (1165)
+|++|. -+.|. +++..+ .--...+|-.-|.+ +++++.++.+..-.. .....+.
T Consensus 166 ~~g~~~~~lNELe~~------~G~lya-n~w~~~~I~vIDp~------------tG~V~~~Id~~~L~~~~~~~~~~~~v 226 (262)
T 3nol_A 166 AHGEELPELNELEWV------DGEIFA-NVWQTNKIVRIDPE------------TGKVTGIIDLNGILAEAGPLPSPIDV 226 (262)
T ss_dssp ETTEECCCEEEEEEE------TTEEEE-EETTSSEEEEECTT------------TCBEEEEEECTTGGGGSCSCCSSCCC
T ss_pred cCCccccccceeEEE------CCEEEE-EEccCCeEEEEECC------------CCcEEEEEECCcCccccccccCcCCc
Confidence 355554 35663 234233 34455677777764 449999999853211 1123568
Q ss_pred EEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 278 FNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 278 f~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
-|-+|++|+++.|+++.-.=+.+|-|.|..
T Consensus 227 lNGIA~dp~~~~lfVTGK~Wp~~~ev~~~~ 256 (262)
T 3nol_A 227 LNGIAWDKEHHRLFVTGKLWPKVFEITLTQ 256 (262)
T ss_dssp EEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred eEEEEEcCCCCEEEEECCCCCceEEEEEec
Confidence 899999999999999999999999999975
No 207
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=93.89 E-value=0.45 Score=48.17 Aligned_cols=126 Identities=11% Similarity=0.106 Sum_probs=73.1
Q ss_pred cEeeec--CceEEEeecCCcEEEEeCcchhhHhhc-CC-cc---------------------EEEeecCCCceeEEecCC
Q 001070 151 RQIAVN--KHYVCYGLKGGNVRVLNLNTATRSLLR-GH-TK---------------------IKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 151 R~IAVn--~~yIayG~kdg~IRVwdi~t~ir~llr-GH-~q---------------------VriWD~~~g~pl~~leph 205 (1165)
+.|+++ |+.++... ++.|++||.++.....+. ++ .. |.+||..+... .+...
T Consensus 70 ~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~--~~~~~ 146 (270)
T 1rwi_B 70 QGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ--TVLPF 146 (270)
T ss_dssp CCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC--EECCC
T ss_pred ceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee--Eeecc
Confidence 447775 55444444 889999999873322222 11 22 55665443321 11122
Q ss_pred CC-CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEee
Q 001070 206 GG-QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVL 284 (1165)
Q Consensus 206 dG-~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~ 284 (1165)
.+ ..+++++| .|++ +++| +...+..|.+|+..+. ..... .+ .+-.....++++
T Consensus 147 ~~~~~p~~i~~--~~~g---~l~v-~~~~~~~i~~~~~~~~------------~~~~~-~~-------~~~~~p~~i~~d 200 (270)
T 1rwi_B 147 TGLNDPDGVAV--DNSG---NVYV-TDTDNNRVVKLEAESN------------NQVVL-PF-------TDITAPWGIAVD 200 (270)
T ss_dssp CSCCSCCCEEE--CTTC---CEEE-EEGGGTEEEEECTTTC------------CEEEC-CC-------SSCCSEEEEEEC
T ss_pred ccCCCceeEEE--eCCC---CEEE-EECCCCEEEEEecCCC------------ceEee-cc-------cCCCCceEEEEC
Confidence 22 36788888 3443 4344 4556789999997543 21111 11 111345678899
Q ss_pred cCCcEEEEeccCCCcEEEEEee
Q 001070 285 SQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 285 p~a~~ilLan~~r~aIYalhl~ 306 (1165)
+++ .|++++...+.||.+...
T Consensus 201 ~~g-~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 201 EAG-TVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp TTC-CEEEEETTTSCEEEECTT
T ss_pred CCC-CEEEEECCCCcEEEEcCC
Confidence 987 788888888899988653
No 208
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.74 E-value=0.4 Score=51.09 Aligned_cols=89 Identities=13% Similarity=0.094 Sum_probs=62.3
Q ss_pred EEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccC
Q 001070 188 IKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKS 267 (1165)
Q Consensus 188 VriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~ 267 (1165)
|++||..+|..+-++..+++..+.+++|+ |+ +++|+ + .++.|..||. .+ +-+-++...
T Consensus 17 v~~~d~~tG~~~w~~~~~~~~~~~~~~~~--pd---G~ilv-s--~~~~V~~~d~-~G------------~~~W~~~~~- 74 (276)
T 3no2_A 17 IAIINKDTKEIVWEYPLEKGWECNSVAAT--KA---GEILF-S--YSKGAKMITR-DG------------RELWNIAAP- 74 (276)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCCEEEEC--TT---SCEEE-E--CBSEEEEECT-TS------------CEEEEEECC-
T ss_pred EEEEECCCCeEEEEeCCCccCCCcCeEEC--CC---CCEEE-e--CCCCEEEECC-CC------------CEEEEEcCC-
Confidence 99999989999999988765679999995 54 45566 3 3788999996 22 334445531
Q ss_pred CCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEE
Q 001070 268 SAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVH 304 (1165)
Q Consensus 268 s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalh 304 (1165)
+......+...+++++|+........||++.
T Consensus 75 ------~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd 105 (276)
T 3no2_A 75 ------AGCEMQTARILPDGNALVAWCGHPSTILEVN 105 (276)
T ss_dssp ------TTCEEEEEEECTTSCEEEEEESTTEEEEEEC
T ss_pred ------CCccccccEECCCCCEEEEecCCCCEEEEEe
Confidence 1234567888999998877654355676664
No 209
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=93.63 E-value=1.5 Score=47.46 Aligned_cols=145 Identities=17% Similarity=0.212 Sum_probs=92.2
Q ss_pred cccccEeeecCceEEE-eecCCcEEEEeCcc-hhhHhhc-CCcc------------------EEEeecCCCceeEEecCC
Q 001070 147 LLIGRQIAVNKHYVCY-GLKGGNVRVLNLNT-ATRSLLR-GHTK------------------IKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 147 ~~~GR~IAVn~~yIay-G~kdg~IRVwdi~t-~ir~llr-GH~q------------------VriWD~~~g~pl~~leph 205 (1165)
-+.|-.|++++..|-- .-+++.|.|||.+| .+...|. +-+. |.++|..+...+.+++-.
T Consensus 64 ~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 64 PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEc
Confidence 4456667776544433 45689999999998 4444333 1111 778887777666666543
Q ss_pred -CCCCc---ceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCC---CCC--ccccc
Q 001070 206 -GGQPV---NSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSS---AKP--RVEEA 276 (1165)
Q Consensus 206 -dG~sV---~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s---~~~--~~~~a 276 (1165)
+|.+| +-+.|. +++..+. --...+|-.-|.+ +++++.++.+..- ... ....+
T Consensus 144 ~~g~~~~~lNeLe~~------~G~lyan-vw~s~~I~vIDp~------------tG~V~~~idl~~l~~~~~~~~~~~~~ 204 (243)
T 3mbr_X 144 AGGRPLDNLNELEWV------NGELLAN-VWLTSRIARIDPA------------SGKVVAWIDLQALVPDADALTDSTND 204 (243)
T ss_dssp ETTEECCCEEEEEEE------TTEEEEE-ETTTTEEEEECTT------------TCBEEEEEECGGGSTTTTSCCCTTSS
T ss_pred cCCcccccceeeEEe------CCEEEEE-ECCCCeEEEEECC------------CCCEEEEEECCcCccccccccCCcCC
Confidence 23333 233442 3332332 2234466666653 4589999997532 110 12357
Q ss_pred cEEEEEeecCCcEEEEeccCCCcEEEEEeecCCC
Q 001070 277 FFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGNN 310 (1165)
Q Consensus 277 ff~sV~~~p~a~~ilLan~~r~aIYalhl~~g~~ 310 (1165)
.-|-+|++|+++-|+++.-.=+.+|-|.|..-+.
T Consensus 205 vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~~~~~ 238 (243)
T 3mbr_X 205 VLNGIAFDAEHDRLFVTGKRWPMLYEIRLTPLPH 238 (243)
T ss_dssp CEEEEEEETTTTEEEEEETTCSEEEEEEECCCCC
T ss_pred ceEEEEEcCCCCEEEEECCCCCcEEEEEEecCCc
Confidence 8999999999999999999999999999976444
No 210
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=93.31 E-value=0.066 Score=59.32 Aligned_cols=81 Identities=10% Similarity=0.052 Sum_probs=34.5
Q ss_pred eecCceEEEeecCCcEEEEeCcc-hhhHhhcCCc-------------c----------EEEeecCCCceeEEecCCCCCC
Q 001070 154 AVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHT-------------K----------IKIWEDSKVAPLIILKPHGGQP 209 (1165)
Q Consensus 154 AVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~-------------q----------VriWD~~~g~pl~~lephdG~s 209 (1165)
..+|+.++.|..||.|+.||.++ ..+..++.|. . |+.||.++|..+-++..+. .
T Consensus 46 ~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~ 123 (369)
T 2hz6_A 46 HVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--A 123 (369)
T ss_dssp ----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC---------------
T ss_pred EcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--c
Confidence 34565666677899999999865 3322222111 0 8899999888766665442 1
Q ss_pred cceeEeecCCCCCCceEEEeecCCCceEEEeEccCc
Q 001070 210 VNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASE 245 (1165)
Q Consensus 210 V~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~ 245 (1165)
+.+ .|++ ..++ .|+.|.+|..||..++
T Consensus 124 ---~~~--~p~~---~~v~-~~~~dg~v~a~d~~tG 150 (369)
T 2hz6_A 124 ---DSL--SPST---SLLY-LGRTEYTITMYDTKTR 150 (369)
T ss_dssp -----------------EE-EEEEEEEEECCCSSSS
T ss_pred ---ccc--cccC---CEEE-EEecCCEEEEEECCCC
Confidence 233 3422 2244 4678899999998665
No 211
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=93.13 E-value=0.29 Score=51.54 Aligned_cols=94 Identities=9% Similarity=0.007 Sum_probs=57.5
Q ss_pred cEEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCC----ceEEEeEccCcCCCCCCCCCCCcceEEE
Q 001070 187 KIKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLN----REVKLWASASEEGWSLPTHAESWKCTQT 262 (1165)
Q Consensus 187 qVriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGsln----rtIKLW~~a~~~~~~~~~~~~~w~C~QT 262 (1165)
.|++||..++.....+..+ +..|++++| .|++ +++| ++..+ ..|.+|+..++ .+...
T Consensus 67 ~i~~~d~~~~~~~~~~~~~-~~~~~~i~~--~~dg---~l~v-~~~~~~~~~~~i~~~d~~~~------------~~~~~ 127 (333)
T 2dg1_A 67 NIFKINPETKEIKRPFVSH-KANPAAIKI--HKDG---RLFV-CYLGDFKSTGGIFAATENGD------------NLQDI 127 (333)
T ss_dssp EEEEECTTTCCEEEEEECS-SSSEEEEEE--CTTS---CEEE-EECTTSSSCCEEEEECTTSC------------SCEEE
T ss_pred EEEEEeCCCCcEEEEeeCC-CCCcceEEE--CCCC---cEEE-EeCCCCCCCceEEEEeCCCC------------EEEEE
Confidence 4999999888754444333 457999999 4554 4344 34444 68999987544 33323
Q ss_pred EeccCCCCCccccccEEEEEeecCCcEEEEecc-----CCCcEEEEEe
Q 001070 263 LDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANA-----KKNAIYSVHL 305 (1165)
Q Consensus 263 Le~~~s~~~~~~~aff~sV~~~p~a~~ilLan~-----~r~aIYalhl 305 (1165)
+... .+...++.++++|++.+++.... ....||.+..
T Consensus 128 ~~~~------~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~ 169 (333)
T 2dg1_A 128 IEDL------STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSP 169 (333)
T ss_dssp ECSS------SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECT
T ss_pred EccC------ccCCcccceEECCCCCEEEEeccccccCCCceEEEEeC
Confidence 3210 12356788999999876654432 1356777643
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=92.99 E-value=1.1 Score=47.47 Aligned_cols=32 Identities=9% Similarity=0.007 Sum_probs=26.5
Q ss_pred ccEEEEEeecCCcEEEEeccCC-----CcEEEEEeec
Q 001070 276 AFFNQVVVLSQAGLLLFANAKK-----NAIYSVHLGY 307 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r-----~aIYalhl~~ 307 (1165)
.+.+.++++|++++|.+++... +.||++.+..
T Consensus 188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 3457889999999999999874 7899998874
No 213
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=92.60 E-value=0.58 Score=55.68 Aligned_cols=92 Identities=9% Similarity=0.029 Sum_probs=68.6
Q ss_pred ccEEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEec
Q 001070 186 TKIKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDL 265 (1165)
Q Consensus 186 ~qVriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~ 265 (1165)
..|.|||..++..+.++. .|..+..++| +||| ++|.+++ .+.+|.+||+... ..+.+.++..
T Consensus 177 ~~V~viD~~t~~v~~~i~--~g~~p~~v~~--SpDG---r~lyv~~-~dg~V~viD~~~~----------t~~~v~~i~~ 238 (567)
T 1qks_A 177 GQIALIDGSTYEIKTVLD--TGYAVHISRL--SASG---RYLFVIG-RDGKVNMIDLWMK----------EPTTVAEIKI 238 (567)
T ss_dssp TEEEEEETTTCCEEEEEE--CSSCEEEEEE--CTTS---CEEEEEE-TTSEEEEEETTSS----------SCCEEEEEEC
T ss_pred CeEEEEECCCCeEEEEEe--CCCCccceEE--CCCC---CEEEEEc-CCCeEEEEECCCC----------CCcEeEEEec
Confidence 349999999998888886 3677889999 4544 5577654 5779999998421 2266677763
Q ss_pred cCCCCCccccccEEEEEee----cCCcEEEEeccCCCcEEEEE
Q 001070 266 KSSAKPRVEEAFFNQVVVL----SQAGLLLFANAKKNAIYSVH 304 (1165)
Q Consensus 266 ~~s~~~~~~~aff~sV~~~----p~a~~ilLan~~r~aIYalh 304 (1165)
+ ..-..++++ |+++|++++|...+.|.++-
T Consensus 239 -------G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 239 -------G--SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMD 272 (567)
T ss_dssp -------C--SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred -------C--CCCceeEEccccCCCCCEEEEEEccCCeEEEEE
Confidence 1 123478889 79999999999999998874
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=92.47 E-value=0.5 Score=51.14 Aligned_cols=82 Identities=17% Similarity=0.295 Sum_probs=58.9
Q ss_pred CCcceeEeecCCCCCCceEEE-eecC---CCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEe
Q 001070 208 QPVNSAQYLTAPNQAGHIILV-TAGP---LNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVV 283 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~~d~~~lv-tsGs---lnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~ 283 (1165)
..|++|+| .|+ ++.+| .+|. .+.+|.+||+.++ +.+.++.+..... .+..+++.+++
T Consensus 67 ~~p~gv~~--d~~---g~L~v~D~g~~~~~~~~i~~~d~~tg------------~~~~~~~~~~~~~--~~~~~~~~v~v 127 (343)
T 2qe8_A 67 DTVLGIKS--DGN---GIVWMLDNGNQSKSVPKLVAWDTLNN------------QLSRVIYLPPPIT--LSNSFVNDLAV 127 (343)
T ss_dssp SCEEEEEE--CSS---SEEEEEECHHHHTSCCEEEEEETTTT------------EEEEEEECCTTTS--CTTCCCCEEEE
T ss_pred eEeeEEEE--cCC---CcEEEEcCCCCcCCCCeEEEEECCCC------------eEEEEEECChhhc--ccccccceEEE
Confidence 38999999 344 34333 3331 1578999998554 6778888753321 23468899999
Q ss_pred ecCCcEEEEecc---CCCcEEEEEeecC
Q 001070 284 LSQAGLLLFANA---KKNAIYSVHLGYG 308 (1165)
Q Consensus 284 ~p~a~~ilLan~---~r~aIYalhl~~g 308 (1165)
+++++++.++|. ..+.||++.+..+
T Consensus 128 d~~~g~~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 128 DLIHNFVYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp ETTTTEEEEEECCSGGGCEEEEEETTTC
T ss_pred ecCCCEEEEEcCccCCCCeEEEEECCCC
Confidence 999999999999 8899999987644
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=92.02 E-value=1.2 Score=53.37 Aligned_cols=126 Identities=12% Similarity=0.132 Sum_probs=71.1
Q ss_pred eeecCceEEEeec----CCcEEEEeCcch--hhHhhcCCcc-------------------------EEEeecCCCce--e
Q 001070 153 IAVNKHYVCYGLK----GGNVRVLNLNTA--TRSLLRGHTK-------------------------IKIWEDSKVAP--L 199 (1165)
Q Consensus 153 IAVn~~yIayG~k----dg~IRVwdi~t~--ir~llrGH~q-------------------------VriWD~~~g~p--l 199 (1165)
++-||+||++... +..|++||+++. ....|..|.. |.+||..++.+ .
T Consensus 241 ~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~ 320 (693)
T 3iuj_A 241 VTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHW 320 (693)
T ss_dssp ECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC
T ss_pred EcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc
Confidence 5558999877543 359999998762 2223333332 66777766543 5
Q ss_pred EEecCCCCCCcceeEeecCCCCCCceEEEeecCCC--ceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcccccc
Q 001070 200 IILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLN--REVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAF 277 (1165)
Q Consensus 200 ~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGsln--rtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~af 277 (1165)
..+.||....+ .| +|++ .+||.+...| ..|++|++.+ .+.+.+.+. +...
T Consensus 321 ~~l~~~~~~~~---~~--s~~g---~~lv~~~~~~g~~~l~~~d~~g-------------~~~~~l~~p-------~~~~ 372 (693)
T 3iuj_A 321 RDLIPERQQVL---TV--HSGS---GYLFAEYMVDATARVEQFDYEG-------------KRVREVALP-------GLGS 372 (693)
T ss_dssp EEEECCCSSCE---EE--EEET---TEEEEEEEETTEEEEEEECTTS-------------CEEEEECCS-------SSSE
T ss_pred EEEecCCCCEE---EE--EEEC---CEEEEEEEECCeeEEEEEECCC-------------CeeEEeecC-------CCce
Confidence 67788865444 44 2333 2244433333 3788888752 234556552 2234
Q ss_pred EEEEEeecCCcEEEEecc---CCCcEEEEEee
Q 001070 278 FNQVVVLSQAGLLLFANA---KKNAIYSVHLG 306 (1165)
Q Consensus 278 f~sV~~~p~a~~ilLan~---~r~aIYalhl~ 306 (1165)
+..+..++++..|++.-. .-..||.+.+.
T Consensus 373 ~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 373 VSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp EEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 445556677776655422 33567776654
No 216
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.93 E-value=1.4 Score=48.50 Aligned_cols=140 Identities=14% Similarity=0.132 Sum_probs=89.1
Q ss_pred ccccEeeecCceEEE-eecCCcEEEEeCcc-hhhHhhc-CCcc------------------EEEeecCCCceeEEecCC-
Q 001070 148 LIGRQIAVNKHYVCY-GLKGGNVRVLNLNT-ATRSLLR-GHTK------------------IKIWEDSKVAPLIILKPH- 205 (1165)
Q Consensus 148 ~~GR~IAVn~~yIay-G~kdg~IRVwdi~t-~ir~llr-GH~q------------------VriWD~~~g~pl~~leph- 205 (1165)
+.|-.|+++|..|-- .-+++.|.|||.+| .+...|. +-+. |.++|..+...+.+++-.
T Consensus 96 ~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~ 175 (268)
T 3nok_A 96 IFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL 175 (268)
T ss_dssp CCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred cceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC
Confidence 456668887654432 33689999999998 4443333 1111 777777776666655542
Q ss_pred CCCCc---ceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCC---C--Ccccccc
Q 001070 206 GGQPV---NSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSA---K--PRVEEAF 277 (1165)
Q Consensus 206 dG~sV---~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~---~--~~~~~af 277 (1165)
+|.+| +-+.|. +++..+ .--...+|-.-|. ++++++.++.+..-. . .....+.
T Consensus 176 ~g~~v~~lNeLe~~------dG~lya-nvw~s~~I~vIDp------------~TG~V~~~Idl~~L~~~~~~~~~~~~~v 236 (268)
T 3nok_A 176 RGQPVELINELECA------NGVIYA-NIWHSSDVLEIDP------------ATGTVVGVIDASALTRAVAGQVTNPEAV 236 (268)
T ss_dssp TTEECCCEEEEEEE------TTEEEE-EETTCSEEEEECT------------TTCBEEEEEECHHHHHHHTTTCCCTTCC
T ss_pred CCcccccccccEEe------CCEEEE-EECCCCeEEEEeC------------CCCcEEEEEECCCCcccccccccCcCCc
Confidence 23333 344552 233223 3334456665565 445999999985210 0 1124578
Q ss_pred EEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 278 FNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 278 f~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
-|-+|++|+++-|+++.-.=+.+|-|.|.
T Consensus 237 lNGIA~dp~~~rlfVTGK~Wp~~~ev~~~ 265 (268)
T 3nok_A 237 LNGIAVEPGSGRIFMTGKLWPRLFEVRLD 265 (268)
T ss_dssp EEEEEECTTTCCEEEEETTCSEEEEEEEE
T ss_pred eEEEEEcCCCCEEEEeCCCCCceEEEEEE
Confidence 99999999999999999999999999985
No 217
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=91.61 E-value=2.7 Score=42.61 Aligned_cols=127 Identities=9% Similarity=0.038 Sum_probs=72.4
Q ss_pred cEeeec--CceEEEeecCCcEEEEeCcchhhHh-hcCCcc----------------------EEEeecCCCceeEEecCC
Q 001070 151 RQIAVN--KHYVCYGLKGGNVRVLNLNTATRSL-LRGHTK----------------------IKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 151 R~IAVn--~~yIayG~kdg~IRVwdi~t~ir~l-lrGH~q----------------------VriWD~~~g~pl~~leph 205 (1165)
+.|+++ |++.+....++.|.+||....++.. +.++.. |.+||. +|......-+.
T Consensus 102 ~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~ 180 (299)
T 2z2n_A 102 YGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPT 180 (299)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred eeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCC
Confidence 447764 6666666668889999984333321 111111 556665 44422221222
Q ss_pred CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeec
Q 001070 206 GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS 285 (1165)
Q Consensus 206 dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p 285 (1165)
.+..+++++| .++ +.++| +...+..|..|+. .+ . ..++.+. .+......+++++
T Consensus 181 ~~~~~~~i~~--~~~---g~l~v-~~~~~~~i~~~~~-~g------------~-~~~~~~~------~~~~~~~~i~~~~ 234 (299)
T 2z2n_A 181 PASGPVGITK--GND---DALWF-VEIIGNKIGRITT-SG------------E-ITEFKIP------TPNARPHAITAGA 234 (299)
T ss_dssp TTCCEEEEEE--CTT---SSEEE-EETTTTEEEEECT-TC------------C-EEEEECS------STTCCEEEEEECS
T ss_pred CCCcceeEEE--CCC---CCEEE-EccCCceEEEECC-CC------------c-EEEEECC------CCCCCceeEEECC
Confidence 2346778888 344 34344 3455678888886 32 1 1123221 1224456888999
Q ss_pred CCcEEEEeccCCCcEEEEEe
Q 001070 286 QAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 286 ~a~~ilLan~~r~aIYalhl 305 (1165)
++. |++++...+.||.+..
T Consensus 235 ~g~-l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 235 GID-LWFTEWGANKIGRLTS 253 (299)
T ss_dssp TTC-EEEEETTTTEEEEEET
T ss_pred CCC-EEEeccCCceEEEECC
Confidence 976 7778878889998875
No 218
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=91.06 E-value=0.84 Score=48.01 Aligned_cols=76 Identities=11% Similarity=0.064 Sum_probs=49.1
Q ss_pred ccEEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecC----CCceEEEeEccCcCCCCCCCCCCCcceEE
Q 001070 186 TKIKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGP----LNREVKLWASASEEGWSLPTHAESWKCTQ 261 (1165)
Q Consensus 186 ~qVriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGs----lnrtIKLW~~a~~~~~~~~~~~~~w~C~Q 261 (1165)
..|++||..+|.+ .++ ..+.+++| +|||. .|+.... ....|.+|+++++ ++.+
T Consensus 43 ~~l~~~d~~~~~~-~~l-----~~~~~~~~--SpDg~---~la~~~~~~~~~~~~l~~~~~~~g------------~~~~ 99 (347)
T 2gop_A 43 NTIVIENLKNNAR-RFI-----ENATMPRI--SPDGK---KIAFMRANEEKKVSEIWVADLETL------------SSKK 99 (347)
T ss_dssp EEEEEEETTTCCE-EEE-----ESCEEEEE--CTTSS---EEEEEEEETTTTEEEEEEEETTTT------------EEEE
T ss_pred ceEEEEeCCCCce-EEc-----ccCCCeEE--CCCCC---EEEEEEeccCCCcceEEEEECCCC------------ceEE
Confidence 3499999998874 344 35889999 56653 3443332 2334777776443 5666
Q ss_pred EEeccCCCCCccccccEEEEEeecCCcEEEEec
Q 001070 262 TLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFAN 294 (1165)
Q Consensus 262 TLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan 294 (1165)
.+.. + . +..++.+|++++|+.+.
T Consensus 100 l~~~--------~-~-~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 100 ILEA--------K-N-IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp EEEE--------S-E-EEEEEECTTSSEEEEEE
T ss_pred EEcC--------C-C-ccceeECCCCCEEEEEE
Confidence 5553 2 2 67888999999877764
No 219
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=90.94 E-value=1.7 Score=44.81 Aligned_cols=74 Identities=8% Similarity=-0.006 Sum_probs=46.9
Q ss_pred CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCC
Q 001070 208 QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQA 287 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a 287 (1165)
..+..++| .|++ +. |..+...+.+|..+++++. .+ .++-- . .-...+.++++|++
T Consensus 79 ~~p~~ia~--d~~~--~~-lyv~d~~~~~I~~~~~~g~------------~~-~~~~~-~------~~~~P~~i~vd~~~ 133 (267)
T 1npe_A 79 GSPEGIAL--DHLG--RT-IFWTDSQLDRIEVAKMDGT------------QR-RVLFD-T------GLVNPRGIVTDPVR 133 (267)
T ss_dssp CCEEEEEE--ETTT--TE-EEEEETTTTEEEEEETTSC------------SC-EEEEC-S------SCSSEEEEEEETTT
T ss_pred CCccEEEE--EecC--Ce-EEEEECCCCEEEEEEcCCC------------CE-EEEEE-C------CCCCccEEEEeeCC
Confidence 35677777 3433 22 4444566788888887532 11 22211 0 11345789999999
Q ss_pred cEEEEeccC--CCcEEEEEee
Q 001070 288 GLLLFANAK--KNAIYSVHLG 306 (1165)
Q Consensus 288 ~~ilLan~~--r~aIYalhl~ 306 (1165)
++|.++|.. .+.||.+.++
T Consensus 134 g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 134 GNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp TEEEEEECCSSSCEEEEEETT
T ss_pred CEEEEEECCCCCcEEEEEecC
Confidence 999999987 5789988765
No 220
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=90.63 E-value=2 Score=52.26 Aligned_cols=137 Identities=11% Similarity=0.111 Sum_probs=70.0
Q ss_pred Eee-ecCceEEEeecC-----CcEEEEeCcch-hh--HhhcCCc-c-----------------------EEEeecCCCc-
Q 001070 152 QIA-VNKHYVCYGLKG-----GNVRVLNLNTA-TR--SLLRGHT-K-----------------------IKIWEDSKVA- 197 (1165)
Q Consensus 152 ~IA-Vn~~yIayG~kd-----g~IRVwdi~t~-ir--~llrGH~-q-----------------------VriWD~~~g~- 197 (1165)
.++ -||++|||+... .+|+|+|+++. -. ..+.+.. . |++|+..++.
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~ 259 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQS 259 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGG
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCch
Confidence 367 789999996653 36999999885 31 1111111 1 4444444432
Q ss_pred -eeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccc
Q 001070 198 -PLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEA 276 (1165)
Q Consensus 198 -pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~a 276 (1165)
.+.+++..++....++.| +|||.. .++.+....+.+|.+|+++++.+ .+ .++.|.. ....
T Consensus 260 ~~~lv~~~~~~~~~~~~~~--SpDg~~-l~~~~~~~~~~~l~~~d~~~~~~--------~~-~~~~l~~-------~~~~ 320 (751)
T 2xe4_A 260 EDVCLYEEHNPLFSAFMYK--AADTNT-LCIGSQSPETAEVHLLDLRKGNA--------HN-TLEIVRP-------REKG 320 (751)
T ss_dssp GCEEEEECCCTTCEEEEEE--CTTSSE-EEEEEECSSCEEEEEEESSSCTT--------CC-CEEESSC-------CCTT
T ss_pred hcEEEEecCCCceEEEEEE--CCCCCE-EEEEecCCCCceEEEEECCCCCC--------Cc-eeEEeec-------CCCC
Confidence 234444333334456677 466533 22222223466788888765421 12 0122211 0112
Q ss_pred cEEEEEeecCCcEEEEeccC---CCcEEEEEeec
Q 001070 277 FFNQVVVLSQAGLLLFANAK---KNAIYSVHLGY 307 (1165)
Q Consensus 277 ff~sV~~~p~a~~ilLan~~---r~aIYalhl~~ 307 (1165)
...++..+....|++++|.. +..||.+.++.
T Consensus 321 ~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 321 VRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp CCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred ceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 22244334455577888764 56899988753
No 221
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=90.50 E-value=1.2 Score=50.93 Aligned_cols=93 Identities=13% Similarity=0.158 Sum_probs=61.9
Q ss_pred EEEeecCCCceeEEecCCC------CCCcceeEeecCCCCCCceEEEeecC-CCceEEEeEccCcCCCCCCCCCCCcceE
Q 001070 188 IKIWEDSKVAPLIILKPHG------GQPVNSAQYLTAPNQAGHIILVTAGP-LNREVKLWASASEEGWSLPTHAESWKCT 260 (1165)
Q Consensus 188 VriWD~~~g~pl~~lephd------G~sV~SVaFl~aP~~~d~~~lvtsGs-lnrtIKLW~~a~~~~~~~~~~~~~w~C~ 260 (1165)
|.|||..++..+.++.-.. |...+.++| +||| ++|.++.- .+.+|.+||+++. +-+
T Consensus 111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~--spDG---k~lyVan~~~~~~VsVID~~t~------------~vv 173 (386)
T 3sjl_D 111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL--TPDG---KTLLFYQFSPAPAVGVVDLEGK------------AFK 173 (386)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEE--CTTS---SEEEEEECSSSCEEEEEETTTT------------EEE
T ss_pred EEEEECCCCeEEEEEECCCccccccCCCCceEEE--cCCC---CEEEEEEcCCCCeEEEEECCCC------------cEE
Confidence 8999999998888775322 457888999 4554 55666553 4789999998655 556
Q ss_pred EEEeccCC--CCCccccccEEEEEeecCCcEEEEeccCCCcE
Q 001070 261 QTLDLKSS--AKPRVEEAFFNQVVVLSQAGLLLFANAKKNAI 300 (1165)
Q Consensus 261 QTLe~~~s--~~~~~~~aff~sV~~~p~a~~ilLan~~r~aI 300 (1165)
.|+....- ..+.+.+.|+ ++.+|+.+++++....+.+
T Consensus 174 ~tI~v~g~~~~~P~g~~~~~---~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 174 RMLDVPDCYHIFPTAPDTFF---MHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp EEEECCSEEEEEEEETTEEE---EEETTSCEEEEECCSSSCC
T ss_pred EEEECCCcceeecCCCceeE---EECCCCCEEEEECCCCCeE
Confidence 66654211 1122334454 6789999999998774444
No 222
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=90.36 E-value=4.6 Score=40.94 Aligned_cols=127 Identities=9% Similarity=0.016 Sum_probs=70.0
Q ss_pred cEeeec--CceEEEeecCCcEEEEeCcchhhHh-hcCCcc----------------------EEEeecCCCceeEEecCC
Q 001070 151 RQIAVN--KHYVCYGLKGGNVRVLNLNTATRSL-LRGHTK----------------------IKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 151 R~IAVn--~~yIayG~kdg~IRVwdi~t~ir~l-lrGH~q----------------------VriWD~~~g~pl~~leph 205 (1165)
+.|+++ |++.+....++.|.+||.+..++.+ +.++.. |.+||. +|.......+.
T Consensus 60 ~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~ 138 (299)
T 2z2n_A 60 MCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPN 138 (299)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred eeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCC
Confidence 346664 6666655567888888876433221 111111 555555 34322222222
Q ss_pred CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeec
Q 001070 206 GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS 285 (1165)
Q Consensus 206 dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p 285 (1165)
.+..+++++| .+++ .+++ +...+..|..|+. .+ +.. .+.+. ........+++++
T Consensus 139 ~~~~~~~i~~--~~~g---~l~v-~~~~~~~i~~~~~-~g------------~~~-~~~~~------~~~~~~~~i~~~~ 192 (299)
T 2z2n_A 139 KGSYPSFITL--GSDN---ALWF-TENQNNAIGRITE-SG------------DIT-EFKIP------TPASGPVGITKGN 192 (299)
T ss_dssp TTCCEEEEEE--CTTS---CEEE-EETTTTEEEEECT-TC------------CEE-EEECS------STTCCEEEEEECT
T ss_pred CCCCCceEEE--cCCC---CEEE-EeCCCCEEEEEcC-CC------------cEE-EeeCC------CCCCcceeEEECC
Confidence 3456778888 3443 4344 4556778888886 22 222 12221 1123456888999
Q ss_pred CCcEEEEeccCCCcEEEEEe
Q 001070 286 QAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 286 ~a~~ilLan~~r~aIYalhl 305 (1165)
++. |.+++...+.||.+..
T Consensus 193 ~g~-l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 193 DDA-LWFVEIIGNKIGRITT 211 (299)
T ss_dssp TSS-EEEEETTTTEEEEECT
T ss_pred CCC-EEEEccCCceEEEECC
Confidence 977 5677777788888765
No 223
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=90.02 E-value=2 Score=47.85 Aligned_cols=96 Identities=11% Similarity=-0.018 Sum_probs=60.5
Q ss_pred EEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecC---------CCceEEEeEccCcCCCCCCCCCCCcc
Q 001070 188 IKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGP---------LNREVKLWASASEEGWSLPTHAESWK 258 (1165)
Q Consensus 188 VriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGs---------lnrtIKLW~~a~~~~~~~~~~~~~w~ 258 (1165)
|.+||..++..+.++.. |..- .++| +||+ ++|.++.. .+.+|-+||.++. +
T Consensus 49 v~v~D~~t~~~~~~i~~--g~~p-~i~~--spDg---~~lyv~n~~~~~~~rg~~~~~v~viD~~t~------------~ 108 (373)
T 2mad_H 49 QWVLDAGSGSILGHVNG--GFLP-NPVA--AHSG---SEFALASTSFSRIAKGKRTDYVEVFDPVTF------------L 108 (373)
T ss_pred EEEEECCCCeEEEEecC--CCCC-CeEE--CCCC---CEEEEEeccccccccCCCCCeEEEEECCCC------------c
Confidence 66677666666666653 4333 8888 4554 44665543 4677999997433 5
Q ss_pred eEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccC-CCcEEEEE
Q 001070 259 CTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAK-KNAIYSVH 304 (1165)
Q Consensus 259 C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~-r~aIYalh 304 (1165)
-+.++......... ...+-..++++|+++||+++|.. .+.|+++-
T Consensus 109 ~~~~i~~~~~~~~~-~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD 154 (373)
T 2mad_H 109 PIADIELPDAPRFD-VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV 154 (373)
T ss_pred EEEEEECCCccccc-cCCCccceEECCCCCEEEEEecCCCCeEEEEE
Confidence 56666642111000 01222367899999999999986 68899986
No 224
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=89.28 E-value=5.2 Score=41.19 Aligned_cols=31 Identities=10% Similarity=0.067 Sum_probs=27.7
Q ss_pred ccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 276 AFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
.+-+.+++++++++|.++|...+.||++.++
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence 4567899999999999999999999998875
No 225
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=89.08 E-value=4.4 Score=43.72 Aligned_cols=73 Identities=10% Similarity=-0.007 Sum_probs=45.3
Q ss_pred CcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCc
Q 001070 209 PVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAG 288 (1165)
Q Consensus 209 sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~ 288 (1165)
.+..+|| .+.+ +. |..+-..+++|...++++. .+...+.. .-...+.++++|.++
T Consensus 78 ~p~glav--d~~~--~~-ly~~d~~~~~I~~~~~~g~------------~~~~~~~~--------~~~~P~~iavdp~~g 132 (316)
T 1ijq_A 78 APDGLAV--DWIH--SN-IYWTDSVLGTVSVADTKGV------------KRKTLFRE--------NGSKPRAIVVDPVHG 132 (316)
T ss_dssp CCCEEEE--ETTT--TE-EEEEETTTTEEEEEETTSS------------SEEEEEEC--------TTCCEEEEEEETTTT
T ss_pred CcCEEEE--eecC--Ce-EEEEECCCCEEEEEeCCCC------------ceEEEEEC--------CCCCcceEEeCCCCC
Confidence 4566666 1222 22 3333456788888886432 22222221 123457899999999
Q ss_pred EEEEeccCC-CcEEEEEee
Q 001070 289 LLLFANAKK-NAIYSVHLG 306 (1165)
Q Consensus 289 ~ilLan~~r-~aIYalhl~ 306 (1165)
+|+++|... +.||.+.++
T Consensus 133 ~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 133 FMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp EEEEEECSSSCEEEEEETT
T ss_pred EEEEEccCCCCeEEEEcCC
Confidence 999999875 789998764
No 226
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=88.17 E-value=7.9 Score=39.20 Aligned_cols=89 Identities=12% Similarity=0.050 Sum_probs=52.6
Q ss_pred EEEeecCCCceeEEec-CCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEecc
Q 001070 188 IKIWEDSKVAPLIILK-PHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLK 266 (1165)
Q Consensus 188 VriWD~~~g~pl~~le-phdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~ 266 (1165)
|.+||.. |.. ..+. +..+..+++++| .++ +.++| ++..+..|..|+.. + +.. ++.+.
T Consensus 85 v~~~d~~-g~~-~~~~~~~~~~~~~~i~~--~~~---g~l~v-~~~~~~~i~~~~~~-g------------~~~-~~~~~ 142 (300)
T 2qc5_A 85 IGKLSKK-GGF-TEYPLPQPDSGPYGITE--GLN---GDIWF-TQLNGDRIGKLTAD-G------------TIY-EYDLP 142 (300)
T ss_dssp EEEECTT-SCE-EEEECSSTTCCEEEEEE--CST---TCEEE-EETTTTEEEEECTT-S------------CEE-EEECS
T ss_pred EEEECCC-CCe-EEecCCCCCCCCccceE--CCC---CCEEE-EccCCCeEEEECCC-C------------CEE-EccCC
Confidence 6666655 442 2232 323457888888 243 34345 35556778888764 2 222 22221
Q ss_pred CCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEe
Q 001070 267 SSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 267 ~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl 305 (1165)
. .......+++++++. |.+++...+.||.+..
T Consensus 143 ~------~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 143 N------KGSYPAFITLGSDNA-LWFTENQNNSIGRITN 174 (300)
T ss_dssp S------TTCCEEEEEECTTSS-EEEEETTTTEEEEECT
T ss_pred C------CCCCceeEEECCCCC-EEEEecCCCeEEEECC
Confidence 1 234566889999988 6778877788888754
No 227
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=88.14 E-value=3.4 Score=47.18 Aligned_cols=104 Identities=9% Similarity=0.059 Sum_probs=64.6
Q ss_pred ccEeeec--CceEEEeecCCcEEEEeCcchhh----------------------------HhhcCC-ccEEEeecCCCce
Q 001070 150 GRQIAVN--KHYVCYGLKGGNVRVLNLNTATR----------------------------SLLRGH-TKIKIWEDSKVAP 198 (1165)
Q Consensus 150 GR~IAVn--~~yIayG~kdg~IRVwdi~t~ir----------------------------~llrGH-~qVriWD~~~g~p 198 (1165)
-+.+||. +.+++.|.-+ .++||+++.-.. .|.-|- ..|+|||+++...
T Consensus 40 ~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~fd~~~L~v~~~~~l~v~dv~sl~~ 118 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGDQVLVSTRNALYSLDLEELSE 118 (388)
T ss_dssp CBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEETTEEEEEESSEEEEEESSSTTC
T ss_pred ccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCCeeEEEECCCEEEEEcCCcEEEEEchhhhc
Confidence 4557774 6677777766 566799765211 111110 1199999987655
Q ss_pred eEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccE
Q 001070 199 LIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFF 278 (1165)
Q Consensus 199 l~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff 278 (1165)
......|. ..|.++.|+ .| . ++ .+..|++|.+|++..+ .+.+ + ..-+
T Consensus 119 ~~~~~~~~-~~v~~i~~~-~p---~--~a--v~~~dG~L~v~dl~~~------------~~~~-~-----------~~~V 165 (388)
T 1xip_A 119 FRTVTSFE-KPVFQLKNV-NN---T--LV--ILNSVNDLSALDLRTK------------STKQ-L-----------AQNV 165 (388)
T ss_dssp EEEEEECS-SCEEEEEEC-SS---E--EE--EEETTSEEEEEETTTC------------CEEE-E-----------EESE
T ss_pred cCccceee-cceeeEEec-CC---C--EE--EEECCCCEEEEEccCC------------cccc-c-----------cCCc
Confidence 55555553 478888886 22 1 23 3568999999998544 4433 1 2345
Q ss_pred EEEEeecCC
Q 001070 279 NQVVVLSQA 287 (1165)
Q Consensus 279 ~sV~~~p~a 287 (1165)
..|+.+|.|
T Consensus 166 s~v~WSpkG 174 (388)
T 1xip_A 166 TSFDVTNSQ 174 (388)
T ss_dssp EEEEECSSE
T ss_pred eEEEEcCCc
Confidence 678899999
No 228
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=87.84 E-value=8.2 Score=39.08 Aligned_cols=127 Identities=9% Similarity=0.030 Sum_probs=68.5
Q ss_pred cEeeec--CceEEEeecCCcEEEEeCcchhhH-hhcCCcc----------------------EEEeecCCCceeEEecCC
Q 001070 151 RQIAVN--KHYVCYGLKGGNVRVLNLNTATRS-LLRGHTK----------------------IKIWEDSKVAPLIILKPH 205 (1165)
Q Consensus 151 R~IAVn--~~yIayG~kdg~IRVwdi~t~ir~-llrGH~q----------------------VriWD~~~g~pl~~leph 205 (1165)
+.|+++ |++.+....++.|.+||.+..++. .+.++.. |.+||. +|.......+.
T Consensus 107 ~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~ 185 (300)
T 2qc5_A 107 YGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPT 185 (300)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred ccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCC
Confidence 446664 666666666778888887643322 1111111 445554 34322221222
Q ss_pred CCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeec
Q 001070 206 GGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLS 285 (1165)
Q Consensus 206 dG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p 285 (1165)
.+..++.++| .+++ .++| +...+..|..|+.. + ... .+.+. .+......+++++
T Consensus 186 ~~~~~~~i~~--d~~g---~l~v-~~~~~~~i~~~~~~-g------------~~~-~~~~~------~~~~~~~~i~~d~ 239 (300)
T 2qc5_A 186 NAAAPVGITS--GNDG---ALWF-VEIMGNKIGRITTT-G------------EIS-EYDIP------TPNARPHAITAGK 239 (300)
T ss_dssp TTCCEEEEEE--CTTS---SEEE-EETTTTEEEEECTT-C------------CEE-EEECS------STTCCEEEEEECS
T ss_pred CCCCcceEEE--CCCC---CEEE-EccCCCEEEEEcCC-C------------cEE-EEECC------CCCCCceEEEECC
Confidence 2345777777 3433 4344 44556678888861 1 111 12211 1223456788999
Q ss_pred CCcEEEEeccCCCcEEEEEe
Q 001070 286 QAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 286 ~a~~ilLan~~r~aIYalhl 305 (1165)
++. |.+++...+.||.+..
T Consensus 240 ~g~-l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 240 NSE-IWFTEWGANQIGRITN 258 (300)
T ss_dssp TTC-EEEEETTTTEEEEECT
T ss_pred CCC-EEEeccCCCeEEEECC
Confidence 976 7778877888988754
No 229
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=87.10 E-value=5.3 Score=44.58 Aligned_cols=31 Identities=6% Similarity=0.096 Sum_probs=26.6
Q ss_pred ccEEEEEeecCCcEEEEeccCC-CcEEEEEee
Q 001070 276 AFFNQVVVLSQAGLLLFANAKK-NAIYSVHLG 306 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r-~aIYalhl~ 306 (1165)
..-+.++++|.+++|+.+|... +.||.+..+
T Consensus 202 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 202 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 3457899999999999999988 999998765
No 230
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=86.91 E-value=6 Score=43.52 Aligned_cols=30 Identities=7% Similarity=0.099 Sum_probs=26.4
Q ss_pred cEEEEEeecCCcEEEEeccCC-CcEEEEEee
Q 001070 277 FFNQVVVLSQAGLLLFANAKK-NAIYSVHLG 306 (1165)
Q Consensus 277 ff~sV~~~p~a~~ilLan~~r-~aIYalhl~ 306 (1165)
.-+.++++|.+++|+.+|... +.||.+.++
T Consensus 160 ~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 160 KPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 456899999999999999988 999998765
No 231
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=86.88 E-value=3.9 Score=46.54 Aligned_cols=31 Identities=3% Similarity=0.063 Sum_probs=27.4
Q ss_pred cEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 277 FFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 277 ff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
+-+.++++|++++|+++|...+.||.+.++-
T Consensus 271 ~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 271 WEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred cceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 4557999999999999999999999998763
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=86.78 E-value=3.7 Score=45.08 Aligned_cols=141 Identities=11% Similarity=0.144 Sum_probs=79.7
Q ss_pred ccccCCCcccccccEeeecCce--EEEeecCCcEEEEeCcc--hhhHhhcCC---cc-----------------EEEeec
Q 001070 138 ITKYGSDPELLIGRQIAVNKHY--VCYGLKGGNVRVLNLNT--ATRSLLRGH---TK-----------------IKIWED 193 (1165)
Q Consensus 138 It~Y~sd~~~~~GR~IAVn~~y--IayG~kdg~IRVwdi~t--~ir~llrGH---~q-----------------VriWD~ 193 (1165)
|..|--|+ -..++.+..+++. +++| .+|.||++|.+| .++.+|.++ +. |.|||.
T Consensus 46 v~~~phd~-~~ftqGL~~~~~~Ly~stG-~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~ 123 (268)
T 3nok_A 46 IREYPHAT-NAFTQGLVFHQGHFFESTG-HQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWSG 123 (268)
T ss_dssp EEEEECCT-TCCEEEEEEETTEEEEEET-TTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEET
T ss_pred EEEEcCCC-ccccceEEEECCEEEEEcC-CCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEEC
Confidence 34454444 2334556665443 3344 456799999998 444444443 22 777777
Q ss_pred CCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcc
Q 001070 194 SKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRV 273 (1165)
Q Consensus 194 ~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~ 273 (1165)
.++..+.++.- .|+. ..+++ ++ .+ |+.|- ...+|..+|.++ .+-+.+++......
T Consensus 124 ~Tl~~~~ti~~-~~eG-wGLt~----Dg--~~-L~vSd-Gs~~l~~iDp~T------------~~v~~~I~V~~~g~--- 178 (268)
T 3nok_A 124 MPPQRERTTRY-SGEG-WGLCY----WN--GK-LVRSD-GGTMLTFHEPDG------------FALVGAVQVKLRGQ--- 178 (268)
T ss_dssp TTTEEEEEEEC-SSCC-CCEEE----ET--TE-EEEEC-SSSEEEEECTTT------------CCEEEEEECEETTE---
T ss_pred CcCcEEEEEeC-CCce-eEEec----CC--CE-EEEEC-CCCEEEEEcCCC------------CeEEEEEEeCCCCc---
Confidence 77777777653 2332 34444 22 23 44443 366788787643 36677777532111
Q ss_pred ccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 274 EEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 274 ~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
.-.+.|.+... .+.|.+++...+.|++|-..-
T Consensus 179 ~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 179 PVELINELECA--NGVIYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp ECCCEEEEEEE--TTEEEEEETTCSEEEEECTTT
T ss_pred ccccccccEEe--CCEEEEEECCCCeEEEEeCCC
Confidence 11255666544 456777877889888875443
No 233
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=86.36 E-value=6.2 Score=41.92 Aligned_cols=30 Identities=17% Similarity=0.123 Sum_probs=26.9
Q ss_pred cEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 277 FFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 277 ff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
+-+.++++|++++|+++|...+.||++.+.
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 456789999999999999999999999887
No 234
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.15 E-value=12 Score=47.31 Aligned_cols=95 Identities=20% Similarity=0.290 Sum_probs=53.8
Q ss_pred ccEeeecCceEEEeecCCcEEEEeCcchhhHhhcCCccEEEeecCCCc------eeEEecCCCCC--CcceeEeecCCCC
Q 001070 150 GRQIAVNKHYVCYGLKGGNVRVLNLNTATRSLLRGHTKIKIWEDSKVA------PLIILKPHGGQ--PVNSAQYLTAPNQ 221 (1165)
Q Consensus 150 GR~IAVn~~yIayG~kdg~IRVwdi~t~ir~llrGH~qVriWD~~~g~------pl~~lephdG~--sV~SVaFl~aP~~ 221 (1165)
.|+.|||...|+-+++||-+=-++++.. -.+|....++|-.-+. |.+......+. .+.+++.. ++.
T Consensus 174 ~~l~av~~~~l~Vsl~dGgLlrl~r~~~----~~~~~~~~f~~~s~~~sl~~l~~~~~~~~~~~~~~~~~~~~~~--~~~ 247 (950)
T 4gq2_M 174 DLMAAISTSEICVSFFNGGLTKIILNPK----DASHYEQHIDDSSYLFSLKKYLSLQAFKADYRSPNTIISMIFL--STY 247 (950)
T ss_dssp EEEEECSSSEEEEEETTSCEEEEEEETT----TTEEEEEEECCCCCCCBCC-------CCSSCCCTTCEEEEEEE--TTT
T ss_pred eEEEEEcCCeEEEEECCCCEEEEEecCC----CCCcceeeecCCcHHHhhhhhcccccCCCCCCCcceEEEEeec--CCC
Confidence 6789999999999999875544444321 1123334333322222 22222332222 34444442 332
Q ss_pred CCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEecc
Q 001070 222 AGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLK 266 (1165)
Q Consensus 222 ~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~ 266 (1165)
.|++| =+.|++||||+++++ .|+.|..+.
T Consensus 248 ---~~lft-l~~D~~LRiWsl~t~------------~~v~t~dL~ 276 (950)
T 4gq2_M 248 ---NVLVM-LSLDYKLKVLDLSTN------------QCVETIELS 276 (950)
T ss_dssp ---TEEEE-EETTCEEEEEETTTT------------EEEEEEECC
T ss_pred ---cEEEE-EECCCEEEEEECCCC------------CeEeeeccc
Confidence 34553 569999999999665 899998874
No 235
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=85.36 E-value=3.8 Score=52.58 Aligned_cols=42 Identities=21% Similarity=0.247 Sum_probs=31.0
Q ss_pred HHHhhccCcHHHHHHHHHhcCCH-------H-HHHHHhhccCcccccccC
Q 001070 1032 LSRLVSDRKYEEAFTTALQRSDV-------S-IVSWLCSQVDMHGLLSMV 1073 (1165)
Q Consensus 1032 I~qLI~eGqyEEAF~kALqSsDl-------s-LV~~LcsrvDP~~Lfsl~ 1073 (1165)
....+.-|+||+|+..-++..|. . ||..+|++-.-+.|+.++
T Consensus 945 Fk~~L~l~~ye~Ay~aL~~~pd~~~r~~cLr~LV~~lce~~~~~~L~~lp 994 (1139)
T 4fhn_B 945 LKTACAAGKFDAAHVALMVLSTTPLKKSCLLDFVNQLTKQGKINQLLNYS 994 (1139)
T ss_dssp HHHHHHHCCSGGGGHHHHHHHHSSSCHHHHHHHHHHHHHHCCHHHHHHHT
T ss_pred HHHHHhhCCHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCChhhhhCCC
Confidence 46678889999999887765443 2 788889887776776554
No 236
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=85.07 E-value=2.9 Score=47.92 Aligned_cols=98 Identities=13% Similarity=0.066 Sum_probs=59.2
Q ss_pred EEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeec---------CCCceEEEeEccCcCCCCCCCCCCCcc
Q 001070 188 IKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAG---------PLNREVKLWASASEEGWSLPTHAESWK 258 (1165)
Q Consensus 188 VriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsG---------slnrtIKLW~~a~~~~~~~~~~~~~w~ 258 (1165)
|.|.|..++..+.++.. |.... ++| +|+|.. |.++. ..+.+|.+||.++. +
T Consensus 61 V~ViD~~t~~v~~~I~v--G~~P~-va~--spDG~~---lyVan~~~~r~~~G~~~~~VsviD~~t~------------~ 120 (386)
T 3sjl_D 61 QFVIDGEAGRVIGMIDG--GFLPN-PVV--ADDGSF---IAHASTVFSRIARGERTDYVEVFDPVTL------------L 120 (386)
T ss_dssp EEEEETTTTEEEEEEEE--CSSCE-EEE--CTTSSC---EEEEEEEEEETTEEEEEEEEEEECTTTC------------C
T ss_pred EEEEECCCCeEEEEEEC--CCCCc-EEE--CCCCCE---EEEEcccccccccCCCCCEEEEEECCCC------------e
Confidence 33444444444444432 33334 888 465543 54443 34567999998554 7
Q ss_pred eEEEEeccCCCCC-ccccccEEEEEeecCCcEEEEeccC-CCcEEEEEeec
Q 001070 259 CTQTLDLKSSAKP-RVEEAFFNQVVVLSQAGLLLFANAK-KNAIYSVHLGY 307 (1165)
Q Consensus 259 C~QTLe~~~s~~~-~~~~aff~sV~~~p~a~~ilLan~~-r~aIYalhl~~ 307 (1165)
-+.++........ -+...+ .++++||++|++++|.. .+.|.+|-++-
T Consensus 121 v~~~I~v~~g~r~~~g~~P~--~~a~spDGk~lyVan~~~~~~VsVID~~t 169 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPW--MTSLTPDGKTLLFYQFSPAPAVGVVDLEG 169 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGG--GEEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred EEEEEECCCccccccCCCCc--eEEEcCCCCEEEEEEcCCCCeEEEEECCC
Confidence 7888876321000 011122 57889999999999985 79999987764
No 237
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=85.02 E-value=6.5 Score=41.30 Aligned_cols=79 Identities=14% Similarity=0.130 Sum_probs=46.2
Q ss_pred CcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCc
Q 001070 209 PVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAG 288 (1165)
Q Consensus 209 sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~ 288 (1165)
..+.++| .| |++.|..+.+.+++|..|++....|.+. ..+...++. .+..+...+++++++.
T Consensus 150 ~pngi~~--sp---dg~~lyv~~~~~~~i~~~~~d~~~G~~~-----~~~~~~~~~--------~~~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 150 ISNGLDW--SL---DHKIFYYIDSLSYSVDAFDYDLQTGQIS-----NRRSVYKLE--------KEEQIPDGMCIDAEGK 211 (297)
T ss_dssp BEEEEEE--CT---TSCEEEEEEGGGTEEEEEEECTTTCCEE-----EEEEEEECC--------GGGCEEEEEEEBTTSC
T ss_pred cccceEE--cC---CCCEEEEecCCCCcEEEEeccCCCCccc-----CcEEEEECC--------CCCCCCCeeEECCCCC
Confidence 3456777 34 4455766788889999999753322100 001111111 1234566788999974
Q ss_pred EEEEeccCCCcEEEEEee
Q 001070 289 LLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 289 ~ilLan~~r~aIYalhl~ 306 (1165)
|.+|+...+.||.+..+
T Consensus 212 -lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 212 -LWVACYNGGRVIRLDPV 228 (297)
T ss_dssp -EEEEEETTTEEEEECTT
T ss_pred -EEEEEcCCCEEEEEcCC
Confidence 66777777778776443
No 238
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=81.57 E-value=67 Score=35.20 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=15.9
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHHHH
Q 001070 783 RGIEKAVKASTDALWARFHEENARNEKLLRDRTQ 816 (1165)
Q Consensus 783 ~~ieK~lk~eld~L~~R~dEerr~rEaa~~~RQ~ 816 (1165)
.++...++.+++.+..|+.--...-.+..+...+
T Consensus 58 ~el~~~~~~~~eelr~kL~p~~~el~~~l~~~~e 91 (273)
T 3s84_A 58 DQLRTQVNTQAEQLRRQLTPYAQRMERVLRENAD 91 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 3444555555555555555444333333333333
No 239
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=81.41 E-value=14 Score=41.62 Aligned_cols=122 Identities=11% Similarity=0.074 Sum_probs=70.4
Q ss_pred cCCcEEEEeCcchhhHhhcCCccEEEeecCCC----ceeEEecCCCCCCcceeEeecCCCCCCceEEEeecC--CCceEE
Q 001070 165 KGGNVRVLNLNTATRSLLRGHTKIKIWEDSKV----APLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGP--LNREVK 238 (1165)
Q Consensus 165 kdg~IRVwdi~t~ir~llrGH~qVriWD~~~g----~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGs--lnrtIK 238 (1165)
+||.+|+|=++.. ++.+.|.||+...+ ..+..+++......+.+++. +++.|+++..- .|-..+
T Consensus 123 ~dg~~~L~Vvnh~-----~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~-----~~G~fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 123 DDNTVYLLVVNHP-----GSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAV-----GPEHFYATNDHYFIDPYLK 192 (355)
T ss_dssp TTCCEEEEEEECS-----TTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEE-----ETTEEEEEESCSCSSHHHH
T ss_pred CCCcEEEEEEECC-----CCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEe-----CCCCEEecCCcEeCCcccc
Confidence 4777777766553 25566888886643 23555554444578888884 44566775431 111111
Q ss_pred EeEcc--CcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 239 LWASA--SEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 239 LW~~a--~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
+|+.. ...|.++--+. .+|..-+. .-.|-|-++++||++++.++|...+.||+..+..
T Consensus 193 ~~e~~~~~~~g~vyr~d~--~~~~~~~~---------~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 193 SWEMHLGLAWSFVTYYSP--NDVRVVAE---------GFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp HHHHHTTCCCEEEEEECT--TCCEEEEE---------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cchhhccCCccEEEEEEC--CeEEEeec---------CCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 12210 00111110000 13332222 2367899999999999999999999999999873
No 240
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=80.94 E-value=4.4 Score=45.74 Aligned_cols=98 Identities=11% Similarity=-0.083 Sum_probs=63.1
Q ss_pred cEEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEee---------cCCCceEEEeEccCcCCCCCCCCCCCc
Q 001070 187 KIKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTA---------GPLNREVKLWASASEEGWSLPTHAESW 257 (1165)
Q Consensus 187 qVriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvts---------GslnrtIKLW~~a~~~~~~~~~~~~~w 257 (1165)
.|-|.|..++..+.++.- |... .++| +||+.. |.++ |..+.+|.+||+++.
T Consensus 47 ~vsvID~~t~~v~~~i~v--G~~P-~i~~--spDg~~---lyVan~~~~r~~~G~~~~~VsviD~~T~------------ 106 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLG--AFLS-LAVA--GHSGSD---FALASTSFARSAKGKRTDYVEVFDPVTF------------ 106 (368)
T ss_dssp EEEEEETTTTEEEEEEEE--CTTC-EEEE--CTTSSC---EEEEEEEETTTTSSSEEEEEEEECTTTC------------
T ss_pred eEEEEECCCCeEEEEEeC--CCCC-ceEE--CCCCCE---EEEEcccccccccCCCCCEEEEEECCCC------------
Confidence 367778777777777753 3333 7888 566654 4444 356899999998554
Q ss_pred ceEEEEeccCCC-CCccccccEEEEEeecCCcEEEEeccC-CCcEEEEEee
Q 001070 258 KCTQTLDLKSSA-KPRVEEAFFNQVVVLSQAGLLLFANAK-KNAIYSVHLG 306 (1165)
Q Consensus 258 ~C~QTLe~~~s~-~~~~~~aff~sV~~~p~a~~ilLan~~-r~aIYalhl~ 306 (1165)
+-+.|+...... ...+ ..-..++++||++|++++|.. .+.|-+-+++
T Consensus 107 ~vv~~I~v~~~~~~~~g--~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD 155 (368)
T 1mda_H 107 LPIADIELPDAPRFSVG--PRVHIIGNCASSACLLFFLFGSSAAAGLSVPG 155 (368)
T ss_dssp CEEEEEEETTSCSCCBS--CCTTSEEECTTSSCEEEEECSSSCEEEEEETT
T ss_pred CEEEEEECCCccccccC--CCcceEEEcCCCCEEEEEccCCCCeEEEEEEc
Confidence 778888753110 0001 112267889999999999976 5666663333
No 241
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=80.40 E-value=26 Score=38.89 Aligned_cols=53 Identities=15% Similarity=0.121 Sum_probs=40.5
Q ss_pred CceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCc-EEEEeccCCCcEEEEEeec
Q 001070 234 NREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAG-LLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 234 nrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~-~ilLan~~r~aIYalhl~~ 307 (1165)
+.+|-+.|.+ +++.+.++.+. .....++++||++ +++++|...+.|+++-.+-
T Consensus 297 ~~~V~VID~~------------t~~vv~~i~~g---------~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 297 AKEVTSVTGL------------VGQTSSQISLG---------HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred CCeEEEEECC------------CCEEEEEEECC---------CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 3567777763 44888999862 2345899999999 7888888889999998764
No 242
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=80.35 E-value=20 Score=38.63 Aligned_cols=148 Identities=11% Similarity=0.115 Sum_probs=81.4
Q ss_pred CCcccccccccCCCcc-cccccEeeecCc--eEEEeec-CCcEEEEeCcc-hhhH--hhcCC---cc-------------
Q 001070 131 QQLEVNPITKYGSDPE-LLIGRQIAVNKH--YVCYGLK-GGNVRVLNLNT-ATRS--LLRGH---TK------------- 187 (1165)
Q Consensus 131 pqlev~pIt~Y~sd~~-~~~GR~IAVn~~--yIayG~k-dg~IRVwdi~t-~ir~--llrGH---~q------------- 187 (1165)
|.+...=|..|--|+. |..| +..++. |..+|.. +..||++|.+| .+.. -+-++ +.
T Consensus 5 ~~~~~~v~~~~phd~~~ftqG--L~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 5 PTQGYRVVKRYPHDTTAFTEG--LFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp CBCCEEEEEEEECCTTCCEEE--EEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEES
T ss_pred cccceEEEEEcCCCCcccccc--EEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEe
Confidence 3444444555655542 3333 444443 3344543 35899999998 3322 22222 11
Q ss_pred ----EEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEE
Q 001070 188 ----IKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTL 263 (1165)
Q Consensus 188 ----VriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTL 263 (1165)
|.|||..++..+.++.- .|+. +.+++ ++ .+ |+.|- ...+|..+|.++ .+-+.++
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~-~~~G-wglt~----dg--~~-L~vSd-gs~~l~~iDp~t------------~~~~~~I 140 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRY-PGEG-WALTS----DD--SH-LYMSD-GTAVIRKLDPDT------------LQQVGSI 140 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEEC-SSCC-CEEEE----CS--SC-EEEEC-SSSEEEEECTTT------------CCEEEEE
T ss_pred eCCEEEEEECCcCcEEEEEeC-CCCc-eEEee----CC--CE-EEEEC-CCCeEEEEeCCC------------CeEEEEE
Confidence 77888888777777753 3432 33443 22 23 44443 366788888643 3667777
Q ss_pred eccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 264 DLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 264 e~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
+...... .-.+.|.+... .+.|.+++...+.|++|-..-
T Consensus 141 ~V~~~g~---~~~~lNeLe~~--~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 141 KVTAGGR---PLDNLNELEWV--NGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp ECEETTE---ECCCEEEEEEE--TTEEEEEETTTTEEEEECTTT
T ss_pred EEccCCc---ccccceeeEEe--CCEEEEEECCCCeEEEEECCC
Confidence 7532111 11355665433 666777777888888775543
No 243
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=80.04 E-value=19 Score=38.62 Aligned_cols=92 Identities=17% Similarity=0.078 Sum_probs=51.2
Q ss_pred ccEeeecCceEEEeecCCcEEEEeCcc-hhhHhhcCCcc--------------------EEEeecCCCceeEEecCCCCC
Q 001070 150 GRQIAVNKHYVCYGLKGGNVRVLNLNT-ATRSLLRGHTK--------------------IKIWEDSKVAPLIILKPHGGQ 208 (1165)
Q Consensus 150 GR~IAVn~~yIayG~kdg~IRVwdi~t-~ir~llrGH~q--------------------VriWD~~~g~pl~~lephdG~ 208 (1165)
...+++++..|..|..+|.|..||.+| .++.-+..+.. |..+|.++|..+-++... .
T Consensus 96 ~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~--~ 173 (376)
T 3q7m_A 96 SGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLD--M 173 (376)
T ss_dssp EEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECC--C
T ss_pred ccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCC--C
Confidence 345677778888888999999999987 55433332221 667777777655554432 1
Q ss_pred CcceeEeecCCCCCCceEEEeecCCCceEEEeEccCc
Q 001070 209 PVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASE 245 (1165)
Q Consensus 209 sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~ 245 (1165)
.+........|--.++. +++ |..+..|..+|..++
T Consensus 174 ~~~~~~~~~~~~~~~~~-v~~-g~~~g~l~~~d~~tG 208 (376)
T 3q7m_A 174 PSLSLRGESAPTTAFGA-AVV-GGDNGRVSAVLMEQG 208 (376)
T ss_dssp -----CCCCCCEEETTE-EEE-CCTTTEEEEEETTTC
T ss_pred CceeecCCCCcEEECCE-EEE-EcCCCEEEEEECCCC
Confidence 22111000111111234 333 667888888887554
No 244
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=79.70 E-value=17 Score=43.91 Aligned_cols=26 Identities=15% Similarity=0.077 Sum_probs=21.7
Q ss_pred eecC---ceEEEeecCCcEEEEeCcc-hhh
Q 001070 154 AVNK---HYVCYGLKGGNVRVLNLNT-ATR 179 (1165)
Q Consensus 154 AVn~---~yIayG~kdg~IRVwdi~t-~ir 179 (1165)
.+|| ++|+.+.++|.|.+||..| .+.
T Consensus 321 ~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 321 KIAGKPRKVILHAPKNGFFFVLDRTNGKFI 350 (677)
T ss_dssp EETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred ccCCcEeeEEEEECCCCEEEEEECCCCCEe
Confidence 3467 7899999999999999998 543
No 245
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=79.31 E-value=17 Score=39.84 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=27.8
Q ss_pred ccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 276 AFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
..-+.++++|+++.|.++|...+.||.+.++
T Consensus 203 ~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 203 FWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 3567899999999999999999999999875
No 246
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=78.99 E-value=18 Score=38.85 Aligned_cols=82 Identities=12% Similarity=-0.018 Sum_probs=44.3
Q ss_pred cCceEEEeecCCcEEEEeCcc-hhhHhhc--CCc----------------cEEEeecCCCceeEEecCCCCCCcceeEee
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT-ATRSLLR--GHT----------------KIKIWEDSKVAPLIILKPHGGQPVNSAQYL 216 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t-~ir~llr--GH~----------------qVriWD~~~g~pl~~lephdG~sV~SVaFl 216 (1165)
++..|..|..+|.|..||..+ .++.... +.. .|..||..+|..+-+.....+..+.+.+..
T Consensus 238 ~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~ 317 (376)
T 3q7m_A 238 VNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY 317 (376)
T ss_dssp ETTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE
T ss_pred ECCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE
Confidence 344566667788888888876 3332111 111 166677777765444432222333344432
Q ss_pred cCCCCCCceEEEeecCCCceEEEeEccCc
Q 001070 217 TAPNQAGHIILVTAGPLNREVKLWASASE 245 (1165)
Q Consensus 217 ~aP~~~d~~~lvtsGslnrtIKLW~~a~~ 245 (1165)
++. |++ |..+..|..||..++
T Consensus 318 ------~~~-l~v-~~~~g~l~~~d~~tG 338 (376)
T 3q7m_A 318 ------NGN-LVV-GDSEGYLHWINVEDG 338 (376)
T ss_dssp ------TTE-EEE-ECTTSEEEEEETTTC
T ss_pred ------CCE-EEE-EeCCCeEEEEECCCC
Confidence 233 332 556788998987554
No 247
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=78.62 E-value=20 Score=39.89 Aligned_cols=30 Identities=17% Similarity=0.239 Sum_probs=27.2
Q ss_pred cEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 277 FFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 277 ff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
+-+-++++|+++.|.++|...+.||++.++
T Consensus 247 ~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 247 WPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp CEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred CeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 467899999999999999999999999865
No 248
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=77.71 E-value=62 Score=36.87 Aligned_cols=107 Identities=14% Similarity=0.166 Sum_probs=69.8
Q ss_pred CccEEEeec--CCCceeEEec----C-CCC-CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCC
Q 001070 185 HTKIKIWED--SKVAPLIILK----P-HGG-QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAES 256 (1165)
Q Consensus 185 H~qVriWD~--~~g~pl~~le----p-hdG-~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~ 256 (1165)
+.+|+||++ .++ +|..+- | ..+ ..+|-+|+...|.+.. .|+++++.. .++..|++....+ +...
T Consensus 98 ~n~l~vf~iDp~~~-~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~-~yafV~~k~-G~~~q~~l~~~~~-----g~~~ 169 (355)
T 3amr_A 98 KNTIEIYAIDGKNG-TLQSMTDPDHPIATAINEVYGFTLYHSQKTGK-YYAMVTGKE-GEFEQYELKADKN-----GYIS 169 (355)
T ss_dssp CCEEEEEEECTTTC-CEEECSCTTSCEECCCSSCCCEEEEECTTTCC-EEEEEECSS-SEEEEEEEEECTT-----SCEE
T ss_pred CCeEEEEEECCCCC-ceeeccccccCcCCCCCCeeEEEEEecCCCCc-EEEEEECCC-CeEEEEEEEeCCC-----Cccc
Confidence 444777855 233 344441 1 023 5788899876665433 346666654 7999999854311 1124
Q ss_pred cceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEeecCC
Q 001070 257 WKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLGYGN 309 (1165)
Q Consensus 257 w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~~g~ 309 (1165)
.+-+++|.+.+..| .+++|+++++|+++.-.. .|+.+..+...
T Consensus 170 ~~lVR~f~lgsq~E---------gcvvDd~~g~Lyv~eEd~-GIw~~da~p~~ 212 (355)
T 3amr_A 170 GKKVRAFKMNSQTE---------GMAADDEYGRLYIAEEDE-AIWKFSAEPDG 212 (355)
T ss_dssp EEEEEEEECSSCEE---------EEEEETTTTEEEEEETTT-EEEEEECSTTS
T ss_pred ceEEEEecCCCCcc---------eEEEcCCCCeEEEecccc-eEEEEeCCcCC
Confidence 68889999854322 678999999999999984 59998877543
No 249
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=77.33 E-value=16 Score=45.33 Aligned_cols=134 Identities=15% Similarity=0.096 Sum_probs=70.1
Q ss_pred cEeeec--C-ceEEEeecCCcEEEEeCcchhhH-hhcCC-cc------------EEEeecCCCceeEEecCCCC------
Q 001070 151 RQIAVN--K-HYVCYGLKGGNVRVLNLNTATRS-LLRGH-TK------------IKIWEDSKVAPLIILKPHGG------ 207 (1165)
Q Consensus 151 R~IAVn--~-~yIayG~kdg~IRVwdi~t~ir~-llrGH-~q------------VriWD~~~g~pl~~lephdG------ 207 (1165)
..|||| + +...+-..++.|+|.|++...+. |+.+. .. |++-|.....-++++.. ||
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~-dG~~~~~l 552 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL-NGVDIYSL 552 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET-TSCCEEEE
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEec-CCCceEEE
Confidence 458997 3 44444566789999999985444 44322 11 33323322112343332 23
Q ss_pred -----CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEE
Q 001070 208 -----QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVV 282 (1165)
Q Consensus 208 -----~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~ 282 (1165)
...+.|++ .|.+ +..| + +-..+..|...++++.. . .+|-. +...+.+-+.
T Consensus 553 v~~~l~~P~GLav--D~~~-~~LY-w-aD~~~~~I~~~d~dG~~------------~-~~v~~-------~~~~l~~P~g 607 (791)
T 3m0c_C 553 VTENIQWPNGITL--DLLS-GRLY-W-VDSKLHSISSIDVNGGN------------R-KTILE-------DEKRLAHPFS 607 (791)
T ss_dssp ECSSCSCEEEEEE--ETTT-TEEE-E-EETTTTEEEEEETTSCS------------C-EEEEE-------CTTTTSSEEE
T ss_pred EeCCCCCceEEEE--ecCC-CeEE-E-EeCCCCcEEEEecCCCc------------e-EEEec-------CCCccCCCCE
Confidence 24455555 2222 2222 2 23445566666664431 1 12211 0112222334
Q ss_pred eecCCcEEEEeccCCCcEEEEEeecCCC
Q 001070 283 VLSQAGLLLFANAKKNAIYSVHLGYGNN 310 (1165)
Q Consensus 283 ~~p~a~~ilLan~~r~aIYalhl~~g~~ 310 (1165)
++...++|+++|.+.+.|+.++...|.+
T Consensus 608 lav~~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 608 LAVFEDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp EEEETTEEEEEETTTTEEEEEETTTCCC
T ss_pred EEEeCCEEEEEECCCCEEEEEeCCCCcc
Confidence 4456789999999999999998766654
No 250
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=76.94 E-value=92 Score=34.12 Aligned_cols=21 Identities=24% Similarity=0.156 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcC
Q 001070 939 TFQKGMVEHTTATLQHFESTH 959 (1165)
Q Consensus 939 ~F~rGm~E~~~qlQqq~dSaK 959 (1165)
.+++.+.++..+++++++..+
T Consensus 202 ~l~~~l~~~~~~~~qq~e~f~ 222 (273)
T 3s84_A 202 GLQKSLAELGGHLDQQVEEFR 222 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHH
Confidence 344445555555555555544
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=76.37 E-value=30 Score=37.77 Aligned_cols=141 Identities=16% Similarity=0.258 Sum_probs=75.1
Q ss_pred ccccCCCcccccccEeee-cCc-eEEEeecC-CcEEEEeCcc-hh-hHh-hcCC---cc-----------------EEEe
Q 001070 138 ITKYGSDPELLIGRQIAV-NKH-YVCYGLKG-GNVRVLNLNT-AT-RSL-LRGH---TK-----------------IKIW 191 (1165)
Q Consensus 138 It~Y~sd~~~~~GR~IAV-n~~-yIayG~kd-g~IRVwdi~t-~i-r~l-lrGH---~q-----------------VriW 191 (1165)
|..|--|+. +..+.+.. |+. |+++|..+ ..||++|.+| .+ +.+ |-++ +. |.||
T Consensus 34 v~~~phd~~-~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~ 112 (262)
T 3nol_A 34 VHSYPHDTK-AFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVW 112 (262)
T ss_dssp EEEEECCTT-CEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEE
T ss_pred EEEecCCCC-cccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEE
Confidence 444544432 22333443 343 44556542 5999999998 33 222 2121 11 6677
Q ss_pred ecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCC
Q 001070 192 EDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKP 271 (1165)
Q Consensus 192 D~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~ 271 (1165)
|..++..+.++.- .|+. ..+++ ++ .+..++.| ..+|..+|.++ .+-+.++.....
T Consensus 113 D~~t~~~~~ti~~-~~eG-~glt~----dg--~~L~~SdG--s~~i~~iDp~T------------~~v~~~I~V~~~--- 167 (262)
T 3nol_A 113 NIRNLRQVRSFNY-DGEG-WGLTH----ND--QYLIMSDG--TPVLRFLDPES------------LTPVRTITVTAH--- 167 (262)
T ss_dssp ETTTCCEEEEEEC-SSCC-CCEEE----CS--SCEEECCS--SSEEEEECTTT------------CSEEEEEECEET---
T ss_pred ECccCcEEEEEEC-CCCc-eEEec----CC--CEEEEECC--CCeEEEEcCCC------------CeEEEEEEeccC---
Confidence 7777777776653 2321 23333 22 23234333 46677777643 366777765321
Q ss_pred cccc-ccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 272 RVEE-AFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 272 ~~~~-aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
+.. .+.|.+... .+.|.+++...+.||+|-..-
T Consensus 168 -g~~~~~lNELe~~--~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 168 -GEELPELNELEWV--DGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp -TEECCCEEEEEEE--TTEEEEEETTSSEEEEECTTT
T ss_pred -CccccccceeEEE--CCEEEEEEccCCeEEEEECCC
Confidence 111 344555544 457888888899888886543
No 252
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=75.40 E-value=37 Score=36.44 Aligned_cols=31 Identities=19% Similarity=0.319 Sum_probs=28.3
Q ss_pred ccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 276 AFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
.+-+.++++++++.|.++|...+.||++.++
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 4677899999999999999999999999876
No 253
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=75.32 E-value=2.1 Score=51.86 Aligned_cols=138 Identities=14% Similarity=0.091 Sum_probs=83.6
Q ss_pred ccCCCcccccccEeeecCceEEE-eecCCcEEEEeCcchhhHhhcCCccEEEeecCCCceeEEecCCCCCCcceeEeecC
Q 001070 140 KYGSDPELLIGRQIAVNKHYVCY-GLKGGNVRVLNLNTATRSLLRGHTKIKIWEDSKVAPLIILKPHGGQPVNSAQYLTA 218 (1165)
Q Consensus 140 ~Y~sd~~~~~GR~IAVn~~yIay-G~kdg~IRVwdi~t~ir~llrGH~qVriWD~~~g~pl~~lephdG~sV~SVaFl~a 218 (1165)
.|-..+..+.|=-++-||+|++- +..+.+|-|+|.++. +.++.|-- |.+ ...+. ++.-|.-...++| .
T Consensus 271 ~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~-~~~~~~~l-----~~~-~~v~~--~v~vG~gP~h~aF--~ 339 (595)
T 1fwx_A 271 RYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF-DAVFYENA-----DPR-SAVVA--EPELGLGPLHTAF--D 339 (595)
T ss_dssp EEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH-HHHHHSCC-----CGG-GGEEE--CCBCCSCEEEEEE--C
T ss_pred EEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccc-cccccccc-----Ccc-cceEE--EcCCCCCcceEEE--C
Confidence 34444556778788889998765 666899999999973 22344421 111 11122 2333666888899 4
Q ss_pred CCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCC
Q 001070 219 PNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKK 297 (1165)
Q Consensus 219 P~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r 297 (1165)
|+| ++-++--++.+|-.|+++.+.+.+ . +.+.+.-++++..+-.. +|...-....++||+.||+.+|.-.
T Consensus 340 ~dG----~aY~t~~ldsqV~kwdi~~a~~~~-~-g~~~~~vi~kidV~yqp---Gh~~~~~g~t~~~DGk~l~~~Nk~s 409 (595)
T 1fwx_A 340 GRG----NAYTSLFLDSQVVKWNIEDAIRAY-A-GEKVDPIKDKLDVHYQP---GHLKTVMGETLDATNDWLVCLSKFS 409 (595)
T ss_dssp TTS----EEEEEETTTTEEEEEEHHHHHHHH-H-TCSCCCEEEEEECSSCE---EEEEETTTTSTTCCSSEEEEEESCC
T ss_pred CCC----eEEEEEecCCcEEEEEhhHhhhhh-c-ccccceeEEEeeccccc---ccceeccceEeCCCCCEEEEcCCCC
Confidence 544 366678899999999997742211 0 11246788888863211 1211101124689999999999753
No 254
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=73.94 E-value=66 Score=33.89 Aligned_cols=24 Identities=13% Similarity=0.185 Sum_probs=22.4
Q ss_pred ecCCcEEEEeccCCCcEEEEEeec
Q 001070 284 LSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 284 ~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
+|++++|.++|...+.||++.+..
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCT
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 899999999999999999999874
No 255
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=73.22 E-value=35 Score=37.02 Aligned_cols=132 Identities=11% Similarity=0.067 Sum_probs=75.0
Q ss_pred EeeecC---ceEEEee-cCCcEEEEeCcc-h-hhHh-hcCCcc--------------------EEEeecCCCceeEEecC
Q 001070 152 QIAVNK---HYVCYGL-KGGNVRVLNLNT-A-TRSL-LRGHTK--------------------IKIWEDSKVAPLIILKP 204 (1165)
Q Consensus 152 ~IAVn~---~yIayG~-kdg~IRVwdi~t-~-ir~l-lrGH~q--------------------VriWD~~~g~pl~~lep 204 (1165)
.+++++ =|+++|. .++.|+++|..| . ++.+ +-+|-- |-|+|..++..+.++.-
T Consensus 25 Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~ 104 (266)
T 2iwa_A 25 GLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTH 104 (266)
T ss_dssp EEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEEC
T ss_pred cEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEEC
Confidence 355543 2445564 368999999998 3 3332 222211 77778777777777642
Q ss_pred CCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEee
Q 001070 205 HGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVL 284 (1165)
Q Consensus 205 hdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~ 284 (1165)
..|+. +.+++ |+ .+ |+++. ...+|..+|.++. +-+.++....... .-.+.|.+.+.
T Consensus 105 g~~~g-~glt~----Dg--~~-l~vs~-gs~~l~viD~~t~------------~v~~~I~Vg~~~~---p~~~~nele~~ 160 (266)
T 2iwa_A 105 QMKDG-WGLAT----DG--KI-LYGSD-GTSILYEIDPHTF------------KLIKKHNVKYNGH---RVIRLNELEYI 160 (266)
T ss_dssp CSSSC-CEEEE----CS--SS-EEEEC-SSSEEEEECTTTC------------CEEEEEECEETTE---ECCCEEEEEEE
T ss_pred CCCCe-EEEEE----CC--CE-EEEEC-CCCeEEEEECCCC------------cEEEEEEECCCCc---ccccceeEEEE
Confidence 11222 22333 33 23 44444 3668888886443 5566666421110 11246677666
Q ss_pred cCCcEEEEeccCCCcEEEEEeecCC
Q 001070 285 SQAGLLLFANAKKNAIYSVHLGYGN 309 (1165)
Q Consensus 285 p~a~~ilLan~~r~aIYalhl~~g~ 309 (1165)
+ +.|.+++...+.|++|-.+-+.
T Consensus 161 -d-g~lyvn~~~~~~V~vID~~tg~ 183 (266)
T 2iwa_A 161 -N-GEVWANIWQTDCIARISAKDGT 183 (266)
T ss_dssp -T-TEEEEEETTSSEEEEEETTTCC
T ss_pred -C-CEEEEecCCCCeEEEEECCCCc
Confidence 4 5788888889999998876543
No 256
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=72.95 E-value=41 Score=38.28 Aligned_cols=27 Identities=19% Similarity=0.254 Sum_probs=25.1
Q ss_pred EEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 280 QVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 280 sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
.++++|++++|.++|...+.||.+.+.
T Consensus 277 ~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 277 HIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 589999999999999999999998876
No 257
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=70.71 E-value=75 Score=36.59 Aligned_cols=6 Identities=17% Similarity=0.761 Sum_probs=3.2
Q ss_pred HHHHHH
Q 001070 744 MQDMLN 749 (1165)
Q Consensus 744 mq~~l~ 749 (1165)
||++|.
T Consensus 54 Lqg~Ld 59 (390)
T 1deq_A 54 MKGLID 59 (390)
T ss_pred HHHHHH
Confidence 666544
No 258
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=70.36 E-value=37 Score=38.09 Aligned_cols=29 Identities=17% Similarity=0.161 Sum_probs=24.3
Q ss_pred EEEEEeecCCcEEEEeccC-CCcEEEEEee
Q 001070 278 FNQVVVLSQAGLLLFANAK-KNAIYSVHLG 306 (1165)
Q Consensus 278 f~sV~~~p~a~~ilLan~~-r~aIYalhl~ 306 (1165)
-..++++|.+++|+.+|.. .+.||.+.++
T Consensus 204 P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 204 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp EEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred cceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 4588999999999999976 4789988765
No 259
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=70.35 E-value=17 Score=43.95 Aligned_cols=23 Identities=17% Similarity=0.222 Sum_probs=19.5
Q ss_pred eecCc---eEEEeecCCcEEEEeCcc
Q 001070 154 AVNKH---YVCYGLKGGNVRVLNLNT 176 (1165)
Q Consensus 154 AVn~~---yIayG~kdg~IRVwdi~t 176 (1165)
.++|+ +|+.+.++|.|++||..|
T Consensus 313 ~~~G~~~~~v~~~~~~G~l~~lD~~t 338 (689)
T 1yiq_A 313 PIDGKPRKVLMQAPKNGFFYVIDRAT 338 (689)
T ss_dssp EETTEEEEEEEECCTTSEEEEEETTT
T ss_pred ccCCcEEEEEEEECCCCeEEEEECCC
Confidence 34665 888999999999999987
No 260
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=69.52 E-value=33 Score=36.71 Aligned_cols=104 Identities=13% Similarity=0.056 Sum_probs=61.0
Q ss_pred cCCcEEEEeCcchhhHhhcCCccEEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccC
Q 001070 165 KGGNVRVLNLNTATRSLLRGHTKIKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASAS 244 (1165)
Q Consensus 165 kdg~IRVwdi~t~ir~llrGH~qVriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~ 244 (1165)
.++.+-+.|+.. .+|.+||..++. +..|.. +..|++++|. | +++++|++ +..|.+|+..+
T Consensus 59 ~~~~l~~~d~~~---------~~i~~~d~~~~~-~~~~~~--~~~v~~i~~~--~---dg~l~v~~---~~gl~~~d~~~ 118 (326)
T 2ghs_A 59 ASGTAWWFNILE---------RELHELHLASGR-KTVHAL--PFMGSALAKI--S---DSKQLIAS---DDGLFLRDTAT 118 (326)
T ss_dssp TTTEEEEEEGGG---------TEEEEEETTTTE-EEEEEC--SSCEEEEEEE--E---TTEEEEEE---TTEEEEEETTT
T ss_pred CCCEEEEEECCC---------CEEEEEECCCCc-EEEEEC--CCcceEEEEe--C---CCeEEEEE---CCCEEEEECCC
Confidence 345565556542 248899988775 444542 3479999994 4 44556653 34588898744
Q ss_pred cCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEecc-----CCCcEEEEE
Q 001070 245 EEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANA-----KKNAIYSVH 304 (1165)
Q Consensus 245 ~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~-----~r~aIYalh 304 (1165)
+ ++..-..... . .....++.++++|++.+++-... ....||.+.
T Consensus 119 g------------~~~~~~~~~~-~---~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 119 G------------VLTLHAELES-D---LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp C------------CEEEEECSST-T---CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred C------------cEEEEeeCCC-C---CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 3 3322111110 0 11246789999999996554322 246788876
No 261
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=69.39 E-value=8.7 Score=44.37 Aligned_cols=98 Identities=13% Similarity=0.040 Sum_probs=57.7
Q ss_pred EEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeec---------CCCceEEEeEccCcCCCCCCCCCCCcc
Q 001070 188 IKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAG---------PLNREVKLWASASEEGWSLPTHAESWK 258 (1165)
Q Consensus 188 VriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsG---------slnrtIKLW~~a~~~~~~~~~~~~~w~ 258 (1165)
|.|.|..++..+.++.- |... .++| +||+.. |.++. ..+.+|-+||..+. +
T Consensus 101 VsVID~~t~~vv~~I~v--G~~P-gia~--SpDgk~---lyVan~~~~~~~~G~~~~~VsviD~~t~------------~ 160 (426)
T 3c75_H 101 QFVIDGSTGRILGMTDG--GFLP-HPVA--AEDGSF---FAQASTVFERIARGKRTDYVEVFDPVTF------------L 160 (426)
T ss_dssp EEEEETTTTEEEEEEEE--CSSC-EEEE--CTTSSC---EEEEEEEEEETTEEEEEEEEEEECTTTC------------C
T ss_pred EEEEECCCCEEEEEEEC--CCCC-ceEE--CCCCCE---EEEEeccccccccCCCCCEEEEEECCCC------------c
Confidence 44444444444444432 3333 7888 566543 44433 24668999997554 6
Q ss_pred eEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccC-CCcEEEEEee
Q 001070 259 CTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAK-KNAIYSVHLG 306 (1165)
Q Consensus 259 C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~-r~aIYalhl~ 306 (1165)
-+.++.+...... .....-..++++||++|++++|.. .+.|.+|-+.
T Consensus 161 vv~~I~v~g~~r~-~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~ 208 (426)
T 3c75_H 161 PIADIELPDAPRF-LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLE 208 (426)
T ss_dssp EEEEEEETTCCCC-CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred EEEEEECCCcccc-ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECC
Confidence 6778775311000 000111256789999999999975 7889998655
No 262
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=69.16 E-value=10 Score=47.01 Aligned_cols=91 Identities=15% Similarity=0.167 Sum_probs=54.3
Q ss_pred cccEeeecCceEEEeecCCcEEEEeCcchhhHhhcCCccEEEeecCC-CceeEE-ecCC---C-CCCcceeEeecCCCCC
Q 001070 149 IGRQIAVNKHYVCYGLKGGNVRVLNLNTATRSLLRGHTKIKIWEDSK-VAPLII-LKPH---G-GQPVNSAQYLTAPNQA 222 (1165)
Q Consensus 149 ~GR~IAVn~~yIayG~kdg~IRVwdi~t~ir~llrGH~qVriWD~~~-g~pl~~-leph---d-G~sV~SVaFl~aP~~~ 222 (1165)
..|+.||++..++-+++||-+=-++++.. ++-.+-.+++++ +..+.. |... . +..|.++.| .
T Consensus 163 Ph~L~avs~~~liVsL~DGGLLrL~r~~~------~d~~~~~Fnd~s~l~SL~~lf~~~~~~~~~~~Is~~~~------~ 230 (729)
T 3f7f_A 163 PHFLFYVSPQFSVVFLEDGGLLGLKKVDG------VHYEPLLFNDNSYLKCLTRFFSRSSKSDYDSVISCKLF------H 230 (729)
T ss_dssp EEEEEECSSSBEEEEETTSCEECCEESSS------SCEECCCCCCCGGGGGGSTTCCTTCSSCCCCEEEEEEE------T
T ss_pred CcEEEEECCCeEEEEEcCCCEEEEEeccC------CCcceeeecCCchhhhhHHhhcCCCCCCcCceEEEecc------C
Confidence 36789999999999999976655555432 111122333332 111111 2111 1 124555555 1
Q ss_pred CceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEec
Q 001070 223 GHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDL 265 (1165)
Q Consensus 223 d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~ 265 (1165)
..||+| =++|++||||+++++ .|+++..+
T Consensus 231 -~~fLft-L~~Dh~LRiWsL~t~------------~lv~t~DL 259 (729)
T 3f7f_A 231 -ERYLIV-LTQNCHLKIWDLTSF------------TLIQDYDM 259 (729)
T ss_dssp -TTEEEE-EETTCEEEEEETTTT------------EEEEEEET
T ss_pred -CcEEEE-EEcCCeEEEEEcCCC------------ceEEeecc
Confidence 244554 669999999999665 99999999
No 263
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=68.58 E-value=23 Score=38.57 Aligned_cols=30 Identities=7% Similarity=0.104 Sum_probs=25.2
Q ss_pred cEEEEEeecCCcEEEEeccC-CCcEEEEEee
Q 001070 277 FFNQVVVLSQAGLLLFANAK-KNAIYSVHLG 306 (1165)
Q Consensus 277 ff~sV~~~p~a~~ilLan~~-r~aIYalhl~ 306 (1165)
.-+.++++|.+++|..+|.. .+.||.+.++
T Consensus 123 ~P~giavdp~~g~ly~td~~~~~~I~r~~~d 153 (318)
T 3sov_A 123 QPRAIALDPSSGFMYWTDWGEVPKIERAGMD 153 (318)
T ss_dssp SEEEEEEEGGGTEEEEEECSSSCEEEEEETT
T ss_pred CccEEEEeCCCCEEEEEecCCCCEEEEEEcC
Confidence 45689999999999999964 7899998765
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=68.48 E-value=58 Score=36.51 Aligned_cols=31 Identities=19% Similarity=0.319 Sum_probs=27.9
Q ss_pred ccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 276 AFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
..-+.++++++++.|.++|+..+.||.+.++
T Consensus 246 ~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 246 QWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 4567899999999999999999999999875
No 265
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=68.17 E-value=53 Score=40.88 Aligned_cols=31 Identities=19% Similarity=0.319 Sum_probs=27.7
Q ss_pred ccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 276 AFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
..-+.+++++..++|.+||+..+.|+.+.++
T Consensus 558 ~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 558 QWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 4567899999999999999999999999875
No 266
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=66.37 E-value=32 Score=36.79 Aligned_cols=11 Identities=27% Similarity=0.244 Sum_probs=5.4
Q ss_pred HHHHHhhhhcc
Q 001070 757 ELQKQMSNLVT 767 (1165)
Q Consensus 757 e~qkqm~~~v~ 767 (1165)
++.||++..+.
T Consensus 37 ~l~~ql~~~~~ 47 (243)
T 2a01_A 37 ALGKQLNLKLL 47 (243)
T ss_dssp HHHCSSCCSSS
T ss_pred HHHHHhhhHHH
Confidence 45555554433
No 267
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=65.42 E-value=16 Score=44.47 Aligned_cols=31 Identities=19% Similarity=0.319 Sum_probs=27.2
Q ss_pred ccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 276 AFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
.+-+.++++|++++|.++|...+.||++.+.
T Consensus 540 ~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred CCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 3456799999999999999999999998875
No 268
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=64.89 E-value=27 Score=39.59 Aligned_cols=138 Identities=10% Similarity=0.117 Sum_probs=77.8
Q ss_pred Cccccccc--ccC--CCcccccccEe-e---ecCceEEEee-cCCcEEEEeCcchhhHhhcCCccEEEeecCCCceeEEe
Q 001070 132 QLEVNPIT--KYG--SDPELLIGRQI-A---VNKHYVCYGL-KGGNVRVLNLNTATRSLLRGHTKIKIWEDSKVAPLIIL 202 (1165)
Q Consensus 132 qlev~pIt--~Y~--sd~~~~~GR~I-A---Vn~~yIayG~-kdg~IRVwdi~t~ir~llrGH~qVriWD~~~g~pl~~l 202 (1165)
+.-|+-+. .|+ ...+...|..- + -+..|||..- .+|.|-|-|.. ..|+++|..++. +..+
T Consensus 106 ~~~VsT~~G~~~~~~g~~g~~dG~~~~~~~~~~P~~lavdp~~~g~Lyv~d~~----------~~I~~id~~~~~-v~~~ 174 (430)
T 3tc9_A 106 KMLVTTFLGTMYDGNTKYDLKDGPFDDCGGFGGAVWLSFDPKNHNHLYLVGEQ----------HPTRLIDFEKEY-VSTV 174 (430)
T ss_dssp CEEEEEEECCCBTTTTBCCBCCEEGGGCBCCSCCCEEEEETTEEEEEEEEEBT----------EEEEEEETTTTE-EEEE
T ss_pred EeEEEEeeeeEEccCCCccccCCCHHHccCCCCCCEEEECCCCCCeEEEEeCC----------CcEEEEECCCCE-EEEE
Confidence 45566555 343 23344444430 1 1456777665 46777777764 237788877655 4444
Q ss_pred cCCCCCCcceeEeecCCCCCCceEEEeecCC----CceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccE
Q 001070 203 KPHGGQPVNSAQYLTAPNQAGHIILVTAGPL----NREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFF 278 (1165)
Q Consensus 203 ephdG~sV~SVaFl~aP~~~d~~~lvtsGsl----nrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff 278 (1165)
-+ .+...+.|+| .+++ .+|+++... ++.+ +|-...+ +| .-..++.- -...
T Consensus 175 ~~-~~~~P~~ia~--d~~G---~~lyvad~~~~~~~~~v-~~~~~~g-~~---------~~~~~l~~---------~~~p 228 (430)
T 3tc9_A 175 YS-GLSKVRTICW--THEA---DSMIITNDQNNNDRPNN-YILTRES-GF---------KVITELTK---------GQNC 228 (430)
T ss_dssp EC-CCSCEEEEEE--CTTS---SEEEEEECCSCTTSEEE-EEEEGGG-TS---------CSEEEEEE---------CSSC
T ss_pred ec-CCCCcceEEE--eCCC---CEEEEEeCCCCcccceE-EEEeCCC-ce---------eeeeeecc---------CCCc
Confidence 33 3567899999 3444 323333432 2233 3332222 12 21123320 1234
Q ss_pred EEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 279 NQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 279 ~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
+.++++|+.++|+++|...+.||.+..+
T Consensus 229 ~giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 229 NGAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred eEEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 4788999999999999999999998865
No 269
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=64.75 E-value=1.2e+02 Score=36.46 Aligned_cols=11 Identities=36% Similarity=0.613 Sum_probs=5.3
Q ss_pred HhHHHHHHHHH
Q 001070 888 RLEATVGRQIQ 898 (1165)
Q Consensus 888 ~Lp~aVaraIq 898 (1165)
+|+-+|.-+|.
T Consensus 149 RLEvDIdiqir 159 (562)
T 3ghg_A 149 RLEVDIDIKIR 159 (562)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 35555554443
No 270
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=64.45 E-value=35 Score=41.27 Aligned_cols=56 Identities=7% Similarity=0.092 Sum_probs=30.3
Q ss_pred EEEeecCCCceeEEecCC-CCCCcceeEeecCCCCCCceEEEeecC----CCceEEEeEccCc
Q 001070 188 IKIWEDSKVAPLIILKPH-GGQPVNSAQYLTAPNQAGHIILVTAGP----LNREVKLWASASE 245 (1165)
Q Consensus 188 VriWD~~~g~pl~~leph-dG~sV~SVaFl~aP~~~d~~~lvtsGs----lnrtIKLW~~a~~ 245 (1165)
|.-||.++|..+-+++.. +....+.+.. +|---++++++.++. .+..|.-||..++
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~~~~~~~~~--sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG 193 (689)
T 1yiq_A 133 LEAIDAKTGQRAWSVDTRADHKRSYTITG--APRVVNGKVVIGNGGAEFGVRGYVTAYDAETG 193 (689)
T ss_dssp EEEEETTTCCEEEEEECCSCTTSCCBCCS--CCEEETTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred EEEEECCCCCEeeeecCcCCCCCCccccC--CcEEECCEEEEEeCCCccCCCCEEEEEECCCC
Confidence 778888888776665543 2222333322 231113343442221 3678999998666
No 271
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=62.75 E-value=7.2 Score=47.43 Aligned_cols=28 Identities=18% Similarity=0.220 Sum_probs=23.0
Q ss_pred EEEEeecCCcEEEEeccCC-CcEEEEEee
Q 001070 279 NQVVVLSQAGLLLFANAKK-NAIYSVHLG 306 (1165)
Q Consensus 279 ~sV~~~p~a~~ilLan~~r-~aIYalhl~ 306 (1165)
+.++++|.+++|+++|... +.||.+.++
T Consensus 499 ~giavDp~~g~ly~td~~~~~~I~~~~~d 527 (699)
T 1n7d_A 499 RAIVVDPVHGFMYWTDWGTPAKIKKGGLN 527 (699)
T ss_dssp CCEECCSSSSCCEECCCSSSCCEEBCCSS
T ss_pred ceEEEccCCCcEEEcccCCCCeEEEEeCC
Confidence 4678999999999999765 788887654
No 272
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=61.84 E-value=42 Score=40.75 Aligned_cols=131 Identities=9% Similarity=0.034 Sum_probs=86.0
Q ss_pred cCceEEEeecC---------------CcEEEEeCcchhhHhhcCC----ccEEEeecCC--Cce-eEEecCCCCCCccee
Q 001070 156 NKHYVCYGLKG---------------GNVRVLNLNTATRSLLRGH----TKIKIWEDSK--VAP-LIILKPHGGQPVNSA 213 (1165)
Q Consensus 156 n~~yIayG~kd---------------g~IRVwdi~t~ir~llrGH----~qVriWD~~~--g~p-l~~lephdG~sV~SV 213 (1165)
||+|++.-.++ ..|-|.|+.+....+-.|- ..|.|.|.++ +.. +.... .|.....|
T Consensus 205 dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip--vg~~PhGv 282 (595)
T 1fwx_A 205 EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP--IANNPHGC 282 (595)
T ss_dssp SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE--EESSCCCE
T ss_pred CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe--cCCCceEE
Confidence 68888776655 4689999887443443342 1299999998 554 33332 26778889
Q ss_pred EeecCCCCCCceEEEeecCCCceEEEeEccCcC----CCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcE
Q 001070 214 QYLTAPNQAGHIILVTAGPLNREVKLWASASEE----GWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGL 289 (1165)
Q Consensus 214 aFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~----~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ 289 (1165)
.|. ||++++++++.++.+|-++|.+... |-|.+. -.-..+++. | .--++++++|++ +
T Consensus 283 ~~s-----PDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~----~~v~~~v~v-------G--~gP~h~aF~~dG-~ 343 (595)
T 1fwx_A 283 NMA-----PDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPR----SAVVAEPEL-------G--LGPLHTAFDGRG-N 343 (595)
T ss_dssp EEC-----TTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGG----GGEEECCBC-------C--SCEEEEEECTTS-E
T ss_pred EEc-----CCCCEEEEeCCCCCeEEEEECcccccccccccCcc----cceEEEcCC-------C--CCcceEEECCCC-e
Confidence 993 5557789999999999999997531 111110 011122221 1 234588899999 8
Q ss_pred EEEeccCCCcEEEEEeec
Q 001070 290 LLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 290 ilLan~~r~aIYalhl~~ 307 (1165)
+.+++--.+.|-.+.++.
T Consensus 344 aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 344 AYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEETTTTEEEEEEHHH
T ss_pred EEEEEecCCcEEEEEhhH
Confidence 999998888887777654
No 273
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=60.72 E-value=37 Score=40.81 Aligned_cols=27 Identities=15% Similarity=0.166 Sum_probs=20.1
Q ss_pred eeecCc---eEEEeecCCcEEEEeCcc-hhh
Q 001070 153 IAVNKH---YVCYGLKGGNVRVLNLNT-ATR 179 (1165)
Q Consensus 153 IAVn~~---yIayG~kdg~IRVwdi~t-~ir 179 (1165)
+.+||+ +|+.+.++|.+.+||..| .+.
T Consensus 307 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 307 LNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred eccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 345665 778888999999999887 443
No 274
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=57.90 E-value=86 Score=35.90 Aligned_cols=99 Identities=13% Similarity=0.179 Sum_probs=64.6
Q ss_pred ceEEEEeccCCCCCccccccEEEEEee---cC----CcEEEEeccCCCcEEEEEeecCCCcccc----ccc----cc---
Q 001070 258 KCTQTLDLKSSAKPRVEEAFFNQVVVL---SQ----AGLLLFANAKKNAIYSVHLGYGNNSAAT----RID----YI--- 319 (1165)
Q Consensus 258 ~C~QTLe~~~s~~~~~~~aff~sV~~~---p~----a~~ilLan~~r~aIYalhl~~g~~~~~~----r~d----yi--- 319 (1165)
+-+++++|+.+.-. ...|++.++++ |. .+++.++|...++|+++-+..|..=... +.| +.
T Consensus 136 ~li~~y~~p~~~~~--~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G 213 (381)
T 3q6k_A 136 PEVVRYYFPTRLVE--KPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGG 213 (381)
T ss_dssp CEEEEEECCGGGCC--CGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETT
T ss_pred eeEEEEECCHHhcc--cCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECC
Confidence 78899999665432 35799999999 33 6899999999999999998876542211 122 00
Q ss_pred cccccccceeeeeeccCC-CCc--------ceEEEEEeehhhhhhhcc
Q 001070 320 AEFTVTMPVLSFTGTIDP-PSE--------HIIKLYCVQTQAIQQYSL 358 (1165)
Q Consensus 320 aeF~v~~PILSft~~~d~-~ge--------~~vq~yCvQtqAIQqy~l 358 (1165)
.+|.+...|..++...+. +|. .--++|.|=|..++.-.+
T Consensus 214 ~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~ 261 (381)
T 3q6k_A 214 KEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGG 261 (381)
T ss_dssp EEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTC
T ss_pred EEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcch
Confidence 123333444444443332 433 236899999999987653
No 275
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=57.66 E-value=1e+02 Score=38.35 Aligned_cols=21 Identities=10% Similarity=0.333 Sum_probs=19.8
Q ss_pred cCceEEEeecCCcEEEEeCcc
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT 176 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t 176 (1165)
+++||.+-..|+++||||.++
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t 250 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTS 250 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTT
T ss_pred CCcEEEEEEcCCeEEEEEcCC
Confidence 688999999999999999988
No 276
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=56.19 E-value=86 Score=37.69 Aligned_cols=19 Identities=11% Similarity=0.235 Sum_probs=14.4
Q ss_pred cEEEEEeecCCcEEEEecc
Q 001070 277 FFNQVVVLSQAGLLLFANA 295 (1165)
Q Consensus 277 ff~sV~~~p~a~~ilLan~ 295 (1165)
.+..++++|+.++|++...
T Consensus 231 ~w~~~a~d~~~~~vy~~~~ 249 (668)
T 1kv9_A 231 VWDSMAYDPELDLLYVGTG 249 (668)
T ss_dssp CCSCEEEETTTTEEEEECC
T ss_pred cccceEEcCCCCEEEEeCC
Confidence 3456789999998888754
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=52.56 E-value=1.5e+02 Score=32.05 Aligned_cols=31 Identities=26% Similarity=0.218 Sum_probs=27.8
Q ss_pred ccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 276 AFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
..-+.++++|+++.|.++|...+.||++.++
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 3567899999999999999999999999875
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=50.97 E-value=1.3e+02 Score=34.27 Aligned_cols=112 Identities=9% Similarity=0.024 Sum_probs=64.0
Q ss_pred ceEEEeec--CCcEEEEeCcchhhHhhcCCccEEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCC-
Q 001070 158 HYVCYGLK--GGNVRVLNLNTATRSLLRGHTKIKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLN- 234 (1165)
Q Consensus 158 ~yIayG~k--dg~IRVwdi~t~ir~llrGH~qVriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGsln- 234 (1165)
..|+...+ +|.|-|-|.. ..|+.||..+|. +.++-+ .+..++.++| .+++ .++|+ ...+
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~----------~~I~~id~~~g~-v~~~~~-~~~~P~giav--d~dG---~lyVa-d~~~~ 203 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQR----------DAFRHVDFVNQY-VDIKTT-NIGQCADVNF--TLNG---DMVVV-DDQSS 203 (433)
T ss_dssp CEEEECTTTTTCEEEEECBT----------SCEEEEETTTTE-EEEECC-CCSCEEEEEE--CTTC---CEEEE-ECCSC
T ss_pred ceEEEccccCCCEEEEEeCC----------CCEEEEECCCCE-EEEeec-CCCCccEEEE--CCCC---CEEEE-cCCCC
Confidence 44555442 5777776664 237888877666 444433 3457899999 4554 33443 3222
Q ss_pred --ceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 235 --REVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 235 --rtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
+.-.+|- ....+| .-..++. .-...+.++++|+.+.|.++|...+.||.+..+
T Consensus 204 ~~~~gv~~~-~~~~~~---------~~~~~~~---------~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 204 DTNTGIYLF-TRASGF---------TERLSLC---------NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp TTSEEEEEE-CGGGTT---------CCEEEEE---------ECSSBCCCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred cccceEEEE-ECCCCe---------ecccccc---------ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 2212222 222222 1112222 113445788999899999999999999998765
No 279
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=50.89 E-value=1.1e+02 Score=36.15 Aligned_cols=29 Identities=7% Similarity=0.061 Sum_probs=26.0
Q ss_pred EEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 279 NQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 279 ~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
..++++|++++|.+||...+.||.+.+.-
T Consensus 313 ~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 313 FQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred eEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 47999999999999999999999987663
No 280
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=49.82 E-value=20 Score=40.36 Aligned_cols=51 Identities=4% Similarity=-0.021 Sum_probs=40.1
Q ss_pred eEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEecc-CCCcEEEEEeec
Q 001070 236 EVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANA-KKNAIYSVHLGY 307 (1165)
Q Consensus 236 tIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~-~r~aIYalhl~~ 307 (1165)
.+.+||+++. +.+.++.+ +. --..++++|++.+++++|. ..+.|+++-+.-
T Consensus 295 ~~~ViD~~t~------------~vv~~i~v-------g~--~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 295 NTSSVTASVG------------QTSGPISN-------GH--DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEEEEESSSC------------CEEECCEE-------EE--EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred CEEEEECCCC------------eEEEEEEC-------CC--CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 3449998554 88888886 22 3558899999999999998 799999998764
No 281
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=47.60 E-value=1.2e+02 Score=31.10 Aligned_cols=25 Identities=4% Similarity=0.203 Sum_probs=14.3
Q ss_pred cEEEEEeecCCcEEEEeccCCCcEEEE
Q 001070 277 FFNQVVVLSQAGLLLFANAKKNAIYSV 303 (1165)
Q Consensus 277 ff~sV~~~p~a~~ilLan~~r~aIYal 303 (1165)
.+..+++++++.+.+-+. ..-||++
T Consensus 216 ~~~~~~~~~~g~l~v~t~--~~gl~~~ 240 (330)
T 3hxj_A 216 TVTRPAISEDGTIYVTSL--DGHLYAI 240 (330)
T ss_dssp CCSCCEECTTSCEEEEET--TTEEEEE
T ss_pred ceeceEECCCCeEEEEcC--CCeEEEE
Confidence 344566677765544432 4567777
No 282
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=45.55 E-value=67 Score=37.95 Aligned_cols=21 Identities=19% Similarity=0.135 Sum_probs=17.0
Q ss_pred cCc---eEEEeecCCcEEEEeCcc
Q 001070 156 NKH---YVCYGLKGGNVRVLNLNT 176 (1165)
Q Consensus 156 n~~---yIayG~kdg~IRVwdi~t 176 (1165)
||+ +|+.+.++|.+.++|..|
T Consensus 312 ~G~~~~~v~~~~~~G~l~~lD~~t 335 (571)
T 2ad6_A 312 NGKMTPLLSHIDRNGILYTLNREN 335 (571)
T ss_dssp TTEEEEEEEEECTTSEEEEEETTT
T ss_pred CCcEEEEEEEeCCCcEEEEEECCC
Confidence 564 566788999999999887
No 283
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=45.32 E-value=53 Score=37.86 Aligned_cols=53 Identities=15% Similarity=0.099 Sum_probs=42.4
Q ss_pred CceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCc-EEEEeccCCCcEEEEEeec
Q 001070 234 NREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAG-LLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 234 nrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~-~ilLan~~r~aIYalhl~~ 307 (1165)
..+|-+.|.+ +++-+.++.. + ..-..++++|+++ +++++|...+.|+++-..-
T Consensus 349 s~~VsVID~~------------T~kvv~~I~v-------g--~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 349 SRFVVVLNAE------------TGERINKIEL-------G--HEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EEEEEEEETT------------TCCEEEEEEE-------E--EEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred CCEEEEEECC------------CCeEEEEEEC-------C--CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 3578888863 4588999986 2 2456899999999 9999999999999998764
No 284
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=44.63 E-value=1.4e+02 Score=30.65 Aligned_cols=83 Identities=7% Similarity=0.065 Sum_probs=42.8
Q ss_pred EEEeecCCCceeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccC
Q 001070 188 IKIWEDSKVAPLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKS 267 (1165)
Q Consensus 188 VriWD~~~g~pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~ 267 (1165)
|..||.. |..+-++..+ +..+.++++. .++.+++ |..+..|..|+.. + +...++...
T Consensus 119 l~~~d~~-g~~~~~~~~~-~~~~~~~~~~-----~~g~l~v--gt~~~~l~~~d~~-g------------~~~~~~~~~- 175 (330)
T 3hxj_A 119 LYAINTD-GTEKWRFKTK-KAIYATPIVS-----EDGTIYV--GSNDNYLYAINPD-G------------TEKWRFKTN- 175 (330)
T ss_dssp EEEECTT-SCEEEEEECS-SCCCSCCEEC-----TTSCEEE--ECTTSEEEEECTT-S------------CEEEEEECS-
T ss_pred EEEEcCC-CCEEEEEcCC-CceeeeeEEc-----CCCEEEE--EcCCCEEEEECCC-C------------CEeEEEecC-
Confidence 4455544 4433333322 2345555551 2334344 4567788888864 2 333344431
Q ss_pred CCCCccccccEEEEEeecCCcEEEEeccCCCcEEEEE
Q 001070 268 SAKPRVEEAFFNQVVVLSQAGLLLFANAKKNAIYSVH 304 (1165)
Q Consensus 268 s~~~~~~~aff~sV~~~p~a~~ilLan~~r~aIYalh 304 (1165)
...+..++++.++.+.+ +. .-||++.
T Consensus 176 -------~~~~~~~~~d~~g~l~v-~t---~~l~~~d 201 (330)
T 3hxj_A 176 -------DAITSAASIGKDGTIYF-GS---DKVYAIN 201 (330)
T ss_dssp -------SCCCSCCEECTTCCEEE-ES---SSEEEEC
T ss_pred -------CCceeeeEEcCCCEEEE-Ee---CEEEEEC
Confidence 23444566677766444 44 7788876
No 285
>3l1n_A MP1P, cell WALL antigen; helix-turn-helix, protein-ligand complex, lipid binding PROT; HET: PLM; 1.30A {Penicillium marneffei}
Probab=43.88 E-value=1.8e+02 Score=30.49 Aligned_cols=40 Identities=15% Similarity=0.220 Sum_probs=34.6
Q ss_pred HHHHHHHHHhHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 001070 908 ALQDALKSSVEASVIPAFEKSCKAMFEQVDATFQKGMVEH 947 (1165)
Q Consensus 908 aIqdavr~af~stLIPAFE~scq~MFqQV~~~F~rGm~E~ 947 (1165)
.-.+.|.+++.+.+.+.|...++.+..+|...|++++..|
T Consensus 155 ~as~~Ls~AvvsKVP~~~~~iA~~l~~~I~~a~~~aI~aY 194 (194)
T 3l1n_A 155 EAAQKLSELVSTKVPHELADISRQLSDGIAAGIKKGIDAF 194 (194)
T ss_dssp HHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3445688889999999999999999999999999998753
No 286
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=43.35 E-value=97 Score=32.34 Aligned_cols=79 Identities=20% Similarity=0.181 Sum_probs=49.7
Q ss_pred eeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCcccccc
Q 001070 198 PLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAF 277 (1165)
Q Consensus 198 pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~af 277 (1165)
.++++... .....+.+|. | +++.|+.++..+..|..|+.. + . ..++.. ...+
T Consensus 36 ~~~~l~~~-~~~~egp~~~--~---~g~~l~~~d~~~~~i~~~~~~-g------------~-~~~~~~--------~~~~ 87 (305)
T 3dr2_A 36 RLLTLYDQ-ATWSEGPAWW--E---AQRTLVWSDLVGRRVLGWRED-G------------T-VDVLLD--------ATAF 87 (305)
T ss_dssp CCEEEECC-CSSEEEEEEE--G---GGTEEEEEETTTTEEEEEETT-S------------C-EEEEEE--------SCSC
T ss_pred ceEEEecC-CcCccCCeEe--C---CCCEEEEEECCCCEEEEEeCC-C------------C-EEEEeC--------CCCc
Confidence 34444432 3467788884 4 444466668888899999862 2 1 234442 2356
Q ss_pred EEEEEeecCCcEEEEeccCCCcEEEEEe
Q 001070 278 FNQVVVLSQAGLLLFANAKKNAIYSVHL 305 (1165)
Q Consensus 278 f~sV~~~p~a~~ilLan~~r~aIYalhl 305 (1165)
.+.++++++++ |++++...+.||.+..
T Consensus 88 ~~gl~~d~dG~-l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 88 TNGNAVDAQQR-LVHCEHGRRAITRSDA 114 (305)
T ss_dssp EEEEEECTTSC-EEEEETTTTEEEEECT
T ss_pred cceeeECCCCC-EEEEECCCCEEEEECC
Confidence 77889999998 4556666677887764
No 287
>2cly_A ATP synthase B chain, mitochondrial; mitochondrion, ION transport, CF(0), stator, transport, acetylation, hydrogen ION transport; 2.8A {Bos taurus} SCOP: f.52.1.1 PDB: 2wss_T*
Probab=40.12 E-value=1.7e+02 Score=31.17 Aligned_cols=41 Identities=20% Similarity=0.050 Sum_probs=17.1
Q ss_pred HHhhhhcccchhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 001070 760 KQMSNLVTLPVTKEGRRLEASLGRGIEKAVKASTDALWARFHEEN 804 (1165)
Q Consensus 760 kqm~~~v~~plsKE~kklE~~L~~~ieK~lk~eld~L~~R~dEer 804 (1165)
|.....++.=+.++++++++.|..-- ..+++++-.||+++.
T Consensus 72 K~~Gp~~a~~~D~~~~~i~~~ln~~r----~~~i~~lk~~Ie~~k 112 (214)
T 2cly_A 72 KKYGASVGEFADKLNEQKIAQLEEVK----QASIKQIQDAIDMEK 112 (214)
T ss_dssp -------CHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 33444444445555666655544322 234555555555543
No 288
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=38.63 E-value=1.4e+02 Score=36.09 Aligned_cols=53 Identities=6% Similarity=0.113 Sum_probs=29.1
Q ss_pred EEEeecCCCceeEEecCC-CC---CCcceeEeecCCCCCCceEEEeecC----CCceEEEeEccCc
Q 001070 188 IKIWEDSKVAPLIILKPH-GG---QPVNSAQYLTAPNQAGHIILVTAGP----LNREVKLWASASE 245 (1165)
Q Consensus 188 VriWD~~~g~pl~~leph-dG---~sV~SVaFl~aP~~~d~~~lvtsGs----lnrtIKLW~~a~~ 245 (1165)
|..||..+|..+-+++.+ +. ..+.+.-.+ .+.+++|.++. .+..|..||..++
T Consensus 140 l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-----~~~~v~v~~~~~~~~~~g~v~a~D~~tG 200 (677)
T 1kb0_A 140 LIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-----FKGKVIIGNGGAEYGVRGYITAYDAETG 200 (677)
T ss_dssp EEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-----ETTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred EEEEECCCCCEEeeecCCcCcCcCcccccCcEE-----ECCEEEEEecccccCCCCEEEEEECCCC
Confidence 778888888877666644 21 122221111 23343342221 3688999998665
No 289
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=38.53 E-value=66 Score=39.11 Aligned_cols=113 Identities=8% Similarity=0.086 Sum_probs=63.5
Q ss_pred cCCcEEEEeCcchhhHhhcCCcc--EEEeecCCC-ceeE-EecCCCCCCcceeEeecCCCCCCceEEEeecC-CC--ceE
Q 001070 165 KGGNVRVLNLNTATRSLLRGHTK--IKIWEDSKV-APLI-ILKPHGGQPVNSAQYLTAPNQAGHIILVTAGP-LN--REV 237 (1165)
Q Consensus 165 kdg~IRVwdi~t~ir~llrGH~q--VriWD~~~g-~pl~-~lephdG~sV~SVaFl~aP~~~d~~~lvtsGs-ln--rtI 237 (1165)
.||.--+|-... .|-++ |+|||..+| ..+. .++ ....+++| +||+.. . +.++-. .. ..|
T Consensus 184 PDG~~lAy~~~~------~G~~~~~l~v~dl~~g~~~l~~~~~----~~~~~~~W--spDg~~-l-~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 184 PEHDLVAFSVDM------SGNEVYTIEFKRISDPSQTIADKVS----GTNGEIVW--GPDHTS-L-FYVTKDETLRENKV 249 (751)
T ss_dssp TTTCEEEEEEES------SSSSCEEEEEEETTCTTCCCCCCEE----EECSCCEE--CSSTTE-E-EEEEECTTCCEEEE
T ss_pred CCCCEEEEEEeC------CCCceEEEEEEECCCCCEeCCcccc----CceeeEEE--ecCCCE-E-EEEEECCCCCCCEE
Confidence 576544443332 24433 999999988 6321 121 12467888 576643 3 232221 12 367
Q ss_pred EEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEecc--CCCcEEEEEeecC
Q 001070 238 KLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFANA--KKNAIYSVHLGYG 308 (1165)
Q Consensus 238 KLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLan~--~r~aIYalhl~~g 308 (1165)
.+|++.++ .+..++.+.. .+..|+..+..+||+++|++... ..+.||.+.++-+
T Consensus 250 ~~~~lgt~------------~~~~~lv~~~-----~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 250 WRHVMGKL------------QSEDVCLYEE-----HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEETTSC------------GGGCEEEEEC-----CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEECCCC------------chhcEEEEec-----CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 77776443 2222222211 12368888999999998887642 3567888887653
No 290
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=38.33 E-value=2.8e+02 Score=33.23 Aligned_cols=29 Identities=10% Similarity=0.153 Sum_probs=24.5
Q ss_pred EEEEEeecCCcEEEEeccC-CCcEEEEEee
Q 001070 278 FNQVVVLSQAGLLLFANAK-KNAIYSVHLG 306 (1165)
Q Consensus 278 f~sV~~~p~a~~ilLan~~-r~aIYalhl~ 306 (1165)
-..++++|..++|..+|.. .+.||.+.++
T Consensus 125 P~~iavdp~~G~lY~tD~g~~~~I~r~~~d 154 (628)
T 4a0p_A 125 PRALALDPAEGFMYWTEWGGKPKIDRAAMD 154 (628)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred cccEEEccCCCeEEEeCCCCCCEEEEEeCC
Confidence 4689999999999999965 7889988765
No 291
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=35.07 E-value=1.8e+02 Score=35.55 Aligned_cols=137 Identities=13% Similarity=0.127 Sum_probs=82.9
Q ss_pred ccccccCCCcccccccEeeecCceEEEeec-CCcEEEEeCcchhhHhhcCCccEEEeecCCCceeEEecCCCCCCcceeE
Q 001070 136 NPITKYGSDPELLIGRQIAVNKHYVCYGLK-GGNVRVLNLNTATRSLLRGHTKIKIWEDSKVAPLIILKPHGGQPVNSAQ 214 (1165)
Q Consensus 136 ~pIt~Y~sd~~~~~GR~IAVn~~yIayG~k-dg~IRVwdi~t~ir~llrGH~qVriWD~~~g~pl~~lephdG~sV~SVa 214 (1165)
.++|.|--.|..+.|=-++.||+||+-+.| +.++-|+|+.+ +..+|.+- |-|.++ +..-++.-|.-....+
T Consensus 313 ~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k-~~~~~~~k----~~~~~~---~~~ae~e~GlGPlHt~ 384 (638)
T 3sbq_A 313 SKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK-LPDLFAGK----LADPRD---VIVGEPELGLGPLHTT 384 (638)
T ss_dssp CSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGG-HHHHHTTC----CSCGGG---GEEECCBCCSCEEEEE
T ss_pred CceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeeh-hhhhhhcc----ccCccc---ceEeeccCCCcccEEE
Confidence 478999999999999999999999988555 89999999986 22333322 111111 1111222245566667
Q ss_pred eecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEE----EeecCCcEE
Q 001070 215 YLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQV----VVLSQAGLL 290 (1165)
Q Consensus 215 Fl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV----~~~p~a~~i 290 (1165)
| .++| +..|+--+|..|.-|+++..-.. +.+ .+.|.-++.+..+=.. | +|.. -..|+|.||
T Consensus 385 F--d~~G----~aYTtlfidSqvvkWni~~a~~~-~~g-~~~~~v~~k~dv~Yqp---G----H~~~~~get~~~dGk~l 449 (638)
T 3sbq_A 385 F--DGRG----NAYTTLFIDSQVVKWNMEEAVRA-YKG-EKVNYIKQKLDVHYQP---G----HLHASLCETNEADGKWL 449 (638)
T ss_dssp E--CSSS----EEEEEETTTTEEEEEEHHHHHHH-HTT-CCCCCEEEEEECSSCE---E----EEEETTTTSTTCCSCEE
T ss_pred E--CCCC----ceEeeeeecceEEEEeccHHHHH-hcC-ccCCeeeeccccccCC---c----ccccCCCccCCCCccEE
Confidence 7 2222 46777888999999999654110 111 1357788888753211 0 0111 135777777
Q ss_pred EEecc
Q 001070 291 LFANA 295 (1165)
Q Consensus 291 lLan~ 295 (1165)
+..|-
T Consensus 450 v~lnK 454 (638)
T 3sbq_A 450 VALSK 454 (638)
T ss_dssp EEEES
T ss_pred EEecc
Confidence 77664
No 292
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=33.90 E-value=4.1e+02 Score=31.83 Aligned_cols=31 Identities=16% Similarity=0.083 Sum_probs=27.7
Q ss_pred ccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 276 AFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
..-+-++++++++.|.++|+..+.||.+-++
T Consensus 166 ~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 3456899999999999999999999999885
No 293
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=33.44 E-value=5.6e+02 Score=29.43 Aligned_cols=116 Identities=16% Similarity=0.244 Sum_probs=74.3
Q ss_pred CCcEEEEeCcchhhHhhcCCcc-----------------EEEeecCCCceeEEecC-C--CCCCc-----ceeEeecCCC
Q 001070 166 GGNVRVLNLNTATRSLLRGHTK-----------------IKIWEDSKVAPLIILKP-H--GGQPV-----NSAQYLTAPN 220 (1165)
Q Consensus 166 dg~IRVwdi~t~ir~llrGH~q-----------------VriWD~~~g~pl~~lep-h--dG~sV-----~SVaFl~aP~ 220 (1165)
.|.|-+++...++...+.||-. .-.|-...|.-|++.|- | +|.+. ..|.| .|+
T Consensus 179 ~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~f--ppe 256 (365)
T 2xzh_A 179 VGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFF--PPE 256 (365)
T ss_dssp EEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECC--CTT
T ss_pred ceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeC--Ccc
Confidence 4888999999999999999987 11222333444666663 2 24333 33444 343
Q ss_pred C-------------CCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCC
Q 001070 221 Q-------------AGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQA 287 (1165)
Q Consensus 221 ~-------------~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a 287 (1165)
. -+-+|+|| -..-|-|+|+.++ .|+-.-++. .+-.|.-.-....+
T Consensus 257 a~~DFPVamqvs~kygviyviT---K~G~ihlyDleTg------------t~i~~nrIS-------~d~iF~ta~~~~~~ 314 (365)
T 2xzh_A 257 AQNDFPVAMQISEKHDVVFLIT---KYGYIHLYDLETG------------TCIYMNRIS-------GETIFVTAPHEATA 314 (365)
T ss_dssp CTTCCEEEEEEETTTTEEEEEE---TTSEEEEEETTTC------------CEEEEEECC-------SSCEEEEEEEGGGT
T ss_pred ccCCceEEEEecccCCEEEEEe---CCcEEEEEEcccC------------cEEEEeccC-------CCceEEecccCCCC
Confidence 2 23566777 5578899998555 999888872 34566554444556
Q ss_pred cEEEEeccCCCcEEEEEeec
Q 001070 288 GLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 288 ~~ilLan~~r~aIYalhl~~ 307 (1165)
|++.+- +|-.||.+-+..
T Consensus 315 Gi~~Vn--r~GqVl~v~v~~ 332 (365)
T 2xzh_A 315 GIIGVN--RKGQVLSVCVEE 332 (365)
T ss_dssp EEEEEE--TTCEEEEEEECT
T ss_pred cEEEEc--CCCEEEEEEECc
Confidence 666665 778888888875
No 294
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=32.33 E-value=4.5e+02 Score=27.38 Aligned_cols=31 Identities=23% Similarity=0.331 Sum_probs=22.4
Q ss_pred ccEEEEEeecCCcEEEEeccCCCcEEEEEeec
Q 001070 276 AFFNQVVVLSQAGLLLFANAKKNAIYSVHLGY 307 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r~aIYalhl~~ 307 (1165)
.|.+.++.. .++.++++|.....||++....
T Consensus 117 ~~~~g~~~~-~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 117 IFLNGITPL-SDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp SCEEEEEES-SSSEEEEEETTTTEEEEEETTT
T ss_pred cccCccccc-CCCcEEEEECCCCeEEEEeCCC
Confidence 455666654 4567888998889999987653
No 295
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=32.31 E-value=78 Score=37.55 Aligned_cols=82 Identities=16% Similarity=0.223 Sum_probs=46.7
Q ss_pred EEEeecCCCc--eeEEe-cCCCCCCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEe
Q 001070 188 IKIWEDSKVA--PLIIL-KPHGGQPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLD 264 (1165)
Q Consensus 188 VriWD~~~g~--pl~~l-ephdG~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe 264 (1165)
|.+||..++. .+..+ .++++ ...+++|+ .+++++|.||..+.++.+||..+. .|..+..+
T Consensus 221 ~~~yd~~t~~w~~~~~~~~~~~~-~~~~~~~~-----~~g~lyv~GG~~~~~v~~yd~~t~----------~W~~~~~~- 283 (656)
T 1k3i_A 221 TSSWDPSTGIVSDRTVTVTKHDM-FCPGISMD-----GNGQIVVTGGNDAKKTSLYDSSSD----------SWIPGPDM- 283 (656)
T ss_dssp EEEECTTTCCBCCCEEEECSCCC-SSCEEEEC-----TTSCEEEECSSSTTCEEEEEGGGT----------EEEECCCC-
T ss_pred EEEEeCCCCcEEeCcccCCCCCC-ccccccCC-----CCCCEEEeCCCCCCceEEecCcCC----------ceeECCCC-
Confidence 6777776653 22222 22222 33456664 455678889988889999997543 34433211
Q ss_pred ccCCCCCccccccEEEEEeecCCcEEEEec
Q 001070 265 LKSSAKPRVEEAFFNQVVVLSQAGLLLFAN 294 (1165)
Q Consensus 265 ~~~s~~~~~~~aff~sV~~~p~a~~ilLan 294 (1165)
.. ...+..+++.+++.++++.-
T Consensus 284 ----~~----~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 284 ----QV----ARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp ----SS----CCSSCEEEECTTSCEEEECC
T ss_pred ----Cc----cccccceEEecCCeEEEEeC
Confidence 11 12333566667888777765
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=31.79 E-value=5.3e+02 Score=30.81 Aligned_cols=31 Identities=16% Similarity=0.268 Sum_probs=28.0
Q ss_pred ccEEEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 276 AFFNQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 276 aff~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
..-+.++++++++.|.++|+..+.|+.+.++
T Consensus 479 ~~P~GlalD~~~~~LY~aD~~~~~I~~~~~d 509 (619)
T 3s94_A 479 GWPNGLALDYDEGKIYWGDAKTDKIEVMNTD 509 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEESS
T ss_pred CCCeeeEEcccCCEEEEEECCCCEEEEEecC
Confidence 4567899999999999999999999999885
No 297
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=30.70 E-value=88 Score=37.12 Aligned_cols=85 Identities=6% Similarity=0.039 Sum_probs=46.4
Q ss_pred cCceEEEeecCC-----------cEEEEeCcc-hhhHh--h----cCCc--c------------------EEEeecCCCc
Q 001070 156 NKHYVCYGLKGG-----------NVRVLNLNT-ATRSL--L----RGHT--K------------------IKIWEDSKVA 197 (1165)
Q Consensus 156 n~~yIayG~kdg-----------~IRVwdi~t-~ir~l--l----rGH~--q------------------VriWD~~~g~ 197 (1165)
||+.++.|..++ .+.+||..+ ..+.+ + ..|. . |++||..+..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 778888876542 688999987 33322 1 1221 1 6777766543
Q ss_pred eeEEecCCCCCCcceeEeecCCCCCCceEEEeecCCC-----ceEEEeEccCc
Q 001070 198 PLIILKPHGGQPVNSAQYLTAPNQAGHIILVTAGPLN-----REVKLWASASE 245 (1165)
Q Consensus 198 pl~~lephdG~sV~SVaFl~aP~~~d~~~lvtsGsln-----rtIKLW~~a~~ 245 (1165)
-...-..+.+..=.+++++ ++++++|.||..+ +++.+||....
T Consensus 277 W~~~~~~~~~R~~~s~~~~-----~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 277 WIPGPDMQVARGYQSSATM-----SDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEECCCCSSCCSSCEEEEC-----TTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred eeECCCCCccccccceEEe-----cCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 1110011112233345554 3557788888533 67888997553
No 298
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=30.49 E-value=2.6e+02 Score=33.51 Aligned_cols=74 Identities=5% Similarity=-0.042 Sum_probs=45.4
Q ss_pred CCcceeEeecCCCCCCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCC
Q 001070 208 QPVNSAQYLTAPNQAGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQA 287 (1165)
Q Consensus 208 ~sV~SVaFl~aP~~~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a 287 (1165)
..+..+|| .+.+ ++ |..+-..++.|...++++. .+ .+|-... -..-..++++|..
T Consensus 84 ~~P~GlAv--D~~~--~~-ly~~d~~~~~I~v~~~dG~------------~~-~~l~~~~-------l~~P~~Iavdp~~ 138 (619)
T 3s94_A 84 LSPDGLAC--DWLG--EK-LYWTDSETNRIEVSNLDGS------------LR-KVLFWQE-------LDQPRAIALDPSS 138 (619)
T ss_dssp SCEEEEEE--ETTT--TE-EEEEETTTTEEEEEETTSC------------SC-EEEECSS-------CSCCCCEEEETTT
T ss_pred CCcCeEEE--EecC--CE-EEEEeCCCCEEEEEECCCC------------CE-EEEEeCC-------CCCCceEEEecCC
Confidence 35677777 2222 22 4445667788888887543 22 2333211 1123378999999
Q ss_pred cEEEEeccC-CCcEEEEEee
Q 001070 288 GLLLFANAK-KNAIYSVHLG 306 (1165)
Q Consensus 288 ~~ilLan~~-r~aIYalhl~ 306 (1165)
++|+.+|.. .+.||.+-++
T Consensus 139 g~ly~tD~g~~~~I~r~~~d 158 (619)
T 3s94_A 139 GFMYWTDWGEVPKIERAGMD 158 (619)
T ss_dssp TEEEEEECSSSCEEEEEETT
T ss_pred CeEEEeccCCCCEEEEEECC
Confidence 999999965 5678877654
No 299
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=28.54 E-value=1.6e+03 Score=32.73 Aligned_cols=16 Identities=13% Similarity=0.333 Sum_probs=9.8
Q ss_pred hhhHHHHHHHHHHHHH
Q 001070 735 PAAFSQVIAMQDMLNQ 750 (1165)
Q Consensus 735 ~~~~~q~~~mq~~l~q 750 (1165)
++....+..+|.+.++
T Consensus 1862 ~~~~~~~~~iH~sv~~ 1877 (3245)
T 3vkg_A 1862 DAVVSSLVYIHQTIGE 1877 (3245)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3455556677776665
No 300
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens}
Probab=28.15 E-value=2.1e+02 Score=31.94 Aligned_cols=31 Identities=29% Similarity=0.451 Sum_probs=15.3
Q ss_pred HHHHHHhhhhc---ccchhhhHHHHHHHHHHHHH
Q 001070 756 KELQKQMSNLV---TLPVTKEGRRLEASLGRGIE 786 (1165)
Q Consensus 756 ke~qkqm~~~v---~~plsKE~kklE~~L~~~ie 786 (1165)
.+++++|..+. ..-|+++...|...|+..|+
T Consensus 84 ~~l~~qL~P~~~e~~~~l~~~~~~Lr~~L~~dlE 117 (307)
T 2l7b_A 84 SELEEQLTPVAEETRARLSKELQAAQARLGADME 117 (307)
T ss_dssp HHHTTCCCSCCSSTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcchHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 44555655543 33344555555555554444
No 301
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=27.87 E-value=2.1e+02 Score=32.17 Aligned_cols=55 Identities=16% Similarity=0.157 Sum_probs=36.1
Q ss_pred ceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCCcEEEEe
Q 001070 224 HIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQAGLLLFA 293 (1165)
Q Consensus 224 ~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a~~ilLa 293 (1165)
..|++-.+..+.+|-||+.+.+. ....-+.+++.+ .-...|-++++++++|.+=.
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~--------~~~~~~~~~~g~-------~~~~pND~~v~~~G~fyvt~ 182 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEE--------KSLLHLKTIRHK-------LLPSVNDIVAVGPEHFYATN 182 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTT--------TEEEEEEEECCT-------TCSSEEEEEEEETTEEEEEE
T ss_pred EEEEEECCCCCCeEEEEEEECCC--------CEEEEEeccccC-------CCCCCceEEEeCCCCEEecC
Confidence 34455555568899999986542 233556666641 12468999999999976543
No 302
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=27.08 E-value=7.9e+02 Score=28.53 Aligned_cols=7 Identities=71% Similarity=1.009 Sum_probs=2.7
Q ss_pred EEEEeCc
Q 001070 169 VRVLNLN 175 (1165)
Q Consensus 169 IRVwdi~ 175 (1165)
+|++|+.
T Consensus 77 L~~L~L~ 83 (597)
T 3oja_B 77 VELLNLN 83 (597)
T ss_dssp CSEEECT
T ss_pred CcEEECC
Confidence 3344433
No 303
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=26.56 E-value=3.7e+02 Score=32.16 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=32.5
Q ss_pred eEEecccCCCCCCCCCCcccccccccCCCcccccccEee----ecC---ceEEEeecCCcEEEEeCcc
Q 001070 116 VAYDVDAVEEGREPTQQLEVNPITKYGSDPELLIGRQIA----VNK---HYVCYGLKGGNVRVLNLNT 176 (1165)
Q Consensus 116 ~~~dVd~~~~ge~~~pqlev~pIt~Y~sd~~~~~GR~IA----Vn~---~yIayG~kdg~IRVwdi~t 176 (1165)
.+|-+|.. -|+.. =+.+.++ ...||+.....-.++ +|| +.|+.+.++|.+.++|+.|
T Consensus 279 sv~Ald~~-TG~~~-W~~q~~~--~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t 342 (599)
T 1w6s_A 279 TIFGRDAD-TGEAK-FGYQKTP--HDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTD 342 (599)
T ss_dssp EEEEEETT-TCCEE-EEEESST--TCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTT
T ss_pred eEEEEeCC-CCcee-eEeecCC--CccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCC
Confidence 45555542 35554 3444443 234444332222222 356 5677799999999999987
No 304
>1u2m_A Histone-like protein HLP-1; coiled coil, chaperone; 2.30A {Escherichia coli} SCOP: f.48.1.1 PDB: 1sg2_A
Probab=26.25 E-value=29 Score=33.76 Aligned_cols=31 Identities=16% Similarity=0.099 Sum_probs=5.9
Q ss_pred HhHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 001070 791 ASTDALWARFHEENARNEKLLRDRTQQITGL 821 (1165)
Q Consensus 791 ~eld~L~~R~dEerr~rEaa~~~RQ~qLL~L 821 (1165)
++|..+.+.|+...+..+.....+++.++.-
T Consensus 67 ~el~~~~~~~q~~~~~~~~~l~~~~~~~~~~ 97 (143)
T 1u2m_A 67 KDVMAQRQTFAQKAQAFEQDRARRSNEERGK 97 (143)
T ss_dssp --------------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555555555555555543
No 305
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=26.07 E-value=6e+02 Score=30.29 Aligned_cols=125 Identities=17% Similarity=0.262 Sum_probs=78.6
Q ss_pred CCcEEEEeCcchhhHhhcCCcc-----------------EEEeecCCCceeEEecCC---CCCCc-----ceeEeecCCC
Q 001070 166 GGNVRVLNLNTATRSLLRGHTK-----------------IKIWEDSKVAPLIILKPH---GGQPV-----NSAQYLTAPN 220 (1165)
Q Consensus 166 dg~IRVwdi~t~ir~llrGH~q-----------------VriWD~~~g~pl~~leph---dG~sV-----~SVaFl~aP~ 220 (1165)
.|.|-+++...++...+.||-. .-.|-..+|.-|++.|-. .|.+. ..|.| .|+
T Consensus 178 ~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~f--ppe 255 (494)
T 1bpo_A 178 VGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFF--PPE 255 (494)
T ss_dssp EEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCC--CTT
T ss_pred cceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeC--Ccc
Confidence 4889999999999999999988 112222334446666631 23322 33444 343
Q ss_pred C-------------CCceEEEeecCCCceEEEeEccCcCCCCCCCCCCCcceEEEEeccCCCCCccccccEEEEEeecCC
Q 001070 221 Q-------------AGHIILVTAGPLNREVKLWASASEEGWSLPTHAESWKCTQTLDLKSSAKPRVEEAFFNQVVVLSQA 287 (1165)
Q Consensus 221 ~-------------~d~~~lvtsGslnrtIKLW~~a~~~~~~~~~~~~~w~C~QTLe~~~s~~~~~~~aff~sV~~~p~a 287 (1165)
. -+-+|+|| -..-|-|+|+.++ .|+-.-++. .+-.|.-.-....+
T Consensus 256 ~~~DFPvamqvs~kygviyviT---K~G~i~lyDleTg------------t~i~~nrIs-------~~~iF~t~~~~~~~ 313 (494)
T 1bpo_A 256 AQNDFPVAMQISEKHDVVFLIT---KYGYIHLYDLETG------------TCIYMNRIS-------GETIFVTAPHEATA 313 (494)
T ss_dssp STTCCEEEEEEETTTTEEEEEE---TTSEEEEEETTTC------------CEEEEEECC-------SSCEEEEEEETTTT
T ss_pred cccCceeEEEecccCCEEEEEe---cCceEEEEecccc------------eeeeeeccc-------CCceEEecccCCCC
Confidence 2 23566777 5567889998555 898888862 34566555455556
Q ss_pred cEEEEeccCCCcEEEEEeecCCCccccccccccc
Q 001070 288 GLLLFANAKKNAIYSVHLGYGNNSAATRIDYIAE 321 (1165)
Q Consensus 288 ~~ilLan~~r~aIYalhl~~g~~~~~~r~dyiae 321 (1165)
|++.+- ++-.||.+-+.. ..-+.||..
T Consensus 314 Gi~~Vn--r~GqVl~v~v~e-----~~ivpyi~~ 340 (494)
T 1bpo_A 314 GIIGVN--RKGQVLSVCVEE-----ENIIPYITN 340 (494)
T ss_dssp EEEEEE--TTCEEEEEEECT-----TTHHHHHHH
T ss_pred cEEEEc--cCceEEEEEEcc-----ccchhhhhh
Confidence 666654 778888888875 334555543
No 306
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=25.51 E-value=2.2e+02 Score=33.71 Aligned_cols=19 Identities=11% Similarity=0.085 Sum_probs=16.5
Q ss_pred ceEEEeecCCcEEEEeCcc
Q 001070 158 HYVCYGLKGGNVRVLNLNT 176 (1165)
Q Consensus 158 ~yIayG~kdg~IRVwdi~t 176 (1165)
++|+.|.++|.+.+||..|
T Consensus 337 ~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 337 KATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp EEEEEECTTSEEEEEETTT
T ss_pred EEEEEECCCceEEEEECCC
Confidence 3777899999999999887
No 307
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=25.09 E-value=4.7e+02 Score=33.08 Aligned_cols=21 Identities=19% Similarity=0.159 Sum_probs=19.0
Q ss_pred cCceEEEeecCCcEEEEeCcc
Q 001070 156 NKHYVCYGLKGGNVRVLNLNT 176 (1165)
Q Consensus 156 n~~yIayG~kdg~IRVwdi~t 176 (1165)
|..||.+-.+|+++||||..+
T Consensus 246 ~~~~lftl~~D~~LRiWsl~t 266 (950)
T 4gq2_M 246 TYNVLVMLSLDYKLKVLDLST 266 (950)
T ss_dssp TTTEEEEEETTCEEEEEETTT
T ss_pred CCcEEEEEECCCEEEEEECCC
Confidence 567999999999999999887
No 308
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=24.25 E-value=4.2e+02 Score=30.17 Aligned_cols=93 Identities=15% Similarity=0.074 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHHHhHhhcchhHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHhhhcC-----------------c
Q 001070 903 TSGKHALQDALKSSVEASVIPAFEKSCKAMFEQVDATFQKGMVE-----HTTATLQHFESTH-----------------S 960 (1165)
Q Consensus 903 tsv~qaIqdavr~af~stLIPAFE~scq~MFqQV~~~F~rGm~E-----~~~qlQqq~dSaK-----------------t 960 (1165)
..+...|.+.+...+....-| +.++..+-+++...+.+...+ ....|||+++.++ .
T Consensus 351 ~~~~~~~~~~~~~vl~G~~t~--eeal~~~~~~i~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (471)
T 3mq9_A 351 SAFWYAVRTAVINAASGRQTV--DEALKDAQTRITAARDGLRAVMEARNVTHLLQQELTEAQKGFQDVEAQAATANHTVM 428 (471)
T ss_dssp HHHHHHHHHHHHHHHHSSSCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCH--HHHHHHHHHHHHHHHHhhHHHHHhhhHHHHHHHHHHHHhhhHHHHHHHhhhcchhHH
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 001070 961 PLALVLRESVNSVSSMAQTLSGEFVDGQRKLFDLAGV 997 (1165)
Q Consensus 961 sLv~~L~etIssmaa~q~~LqsEll~lQrQL~~~a~s 997 (1165)
.|-..|..-++.-..-.+++..|+.++.++|....++
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (471)
T 3mq9_A 429 ALMASLDAEKAQGQKKVEELEGEITTLNHKLQDASAE 465 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 309
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=21.24 E-value=4.3e+02 Score=31.79 Aligned_cols=6 Identities=17% Similarity=0.606 Sum_probs=3.3
Q ss_pred HHHHHH
Q 001070 743 AMQDML 748 (1165)
Q Consensus 743 ~mq~~l 748 (1165)
.||.+|
T Consensus 50 rLQglL 55 (562)
T 3ghg_A 50 RMKGLI 55 (562)
T ss_dssp HHHHHH
T ss_pred chhhhH
Confidence 466654
No 310
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=21.21 E-value=6.3e+02 Score=27.28 Aligned_cols=36 Identities=8% Similarity=0.216 Sum_probs=25.6
Q ss_pred ccEeeecCceEEEee----cCCcEEEEeCcchhhHhhcCC
Q 001070 150 GRQIAVNKHYVCYGL----KGGNVRVLNLNTATRSLLRGH 185 (1165)
Q Consensus 150 GR~IAVn~~yIayG~----kdg~IRVwdi~t~ir~llrGH 185 (1165)
|.-++++|++|+|.. .+..|...|++..-+..|..|
T Consensus 108 ~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~ 147 (302)
T 3s25_A 108 CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNH 147 (302)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESS
T ss_pred ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCC
Confidence 446899999999976 356788888887444444444
No 311
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens}
Probab=21.20 E-value=7e+02 Score=27.68 Aligned_cols=32 Identities=28% Similarity=0.372 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccchhhhHHHH
Q 001070 743 AMQDMLNQLMTMQKELQKQMSNLVTLPVTKEGRRL 777 (1165)
Q Consensus 743 ~mq~~l~ql~~~qke~qkqm~~~v~~plsKE~kkl 777 (1165)
++.+-+.++-..=+++++||- ..-++||++.+
T Consensus 40 ~fwdY~~~~~~~a~~~~eql~---~s~l~kel~~l 71 (307)
T 2l7b_A 40 RFWDYLRWVQTLSEQVQEELL---SSQVTQELRAL 71 (307)
T ss_dssp HHHHHHHHTCCCSTHHHHHTT---SCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 456677777666677777772 34455555443
No 312
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=21.13 E-value=3.4e+02 Score=32.00 Aligned_cols=28 Identities=21% Similarity=0.370 Sum_probs=25.8
Q ss_pred EEEEeecCCcEEEEeccCCCcEEEEEee
Q 001070 279 NQVVVLSQAGLLLFANAKKNAIYSVHLG 306 (1165)
Q Consensus 279 ~sV~~~p~a~~ilLan~~r~aIYalhl~ 306 (1165)
+.++++|+.++|+++|.....||.+-+.
T Consensus 250 ~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 250 NGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred eEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 4778899999999999999999999987
No 313
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=20.85 E-value=3.5e+02 Score=24.82 Aligned_cols=59 Identities=15% Similarity=0.113 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcC---chH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 001070 936 VDATFQKGMVEHTTATLQHFESTH---SPL---ALVLRESVNSVSSMAQTLSGEFVDGQRKLFDL 994 (1165)
Q Consensus 936 V~~~F~rGm~E~~~qlQqq~dSaK---tsL---v~~L~etIssmaa~q~~LqsEll~lQrQL~~~ 994 (1165)
|.+-+++.+.|.+.+.|-.+++.+ ..| -..|.++|+.|..-++.+...+..++++...+
T Consensus 8 VeDKLRrrl~E~~~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL 72 (78)
T 3iv1_A 8 VSDKLRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEEL 72 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455556665555555555544 111 24577778887777777877777777665444
No 314
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=20.79 E-value=3e+02 Score=29.36 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=26.7
Q ss_pred HHHHhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001070 788 AVKASTDALWARFHEENARNEKLLRDRTQQITGLITNLINKDLTASLEKLVK 839 (1165)
Q Consensus 788 ~lk~eld~L~~R~dEerr~rEaa~~~RQ~qLL~LVS~~LnktL~~nLEk~LK 839 (1165)
++.++|+++.+|.+.++... |.-.+-+++.+.| .+-++||++|+
T Consensus 84 R~~AEfeN~RkR~~rE~e~~------~~~a~e~~~~~LL--pVlDnlerAl~ 127 (213)
T 4ani_A 84 RLYADFENFRRRTRQEMEAA------EKYRAQSLASDLL--PVLDNFERALK 127 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHH------HHHTTHHHHHHHH--HHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHh--HHHHHHHHHHH
Confidence 45688999999888776433 2223333333333 34578888874
No 315
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=20.17 E-value=4.6e+02 Score=30.29 Aligned_cols=6 Identities=33% Similarity=0.451 Sum_probs=2.3
Q ss_pred cchhHH
Q 001070 921 VIPAFE 926 (1165)
Q Consensus 921 LIPAFE 926 (1165)
|-+-|+
T Consensus 217 vP~~fK 222 (390)
T 1deq_A 217 VPREFK 222 (390)
T ss_pred CChhhc
Confidence 333344
Done!