Query 001074
Match_columns 1163
No_of_seqs 515 out of 3762
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 09:43:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001074.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001074hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cmm_A Ubiquitin-activating en 100.0 1E-214 3E-219 2018.8 85.2 998 154-1162 3-1015(1015)
2 1y8q_B Anthracycline-, ubiquit 100.0 7E-101 2E-105 930.5 29.3 517 560-1147 2-534 (640)
3 1z7l_A Ubiquitin-activating en 100.0 6.5E-69 2.2E-73 593.7 22.9 268 731-1005 9-276 (276)
4 1tt5_A APPBP1, amyloid protein 100.0 6.7E-64 2.3E-68 603.1 15.6 380 155-541 8-525 (531)
5 1y8q_A Ubiquitin-like 1 activa 100.0 1.6E-59 5.5E-64 539.6 27.7 322 153-542 11-338 (346)
6 1tt5_B Ubiquitin-activating en 100.0 7.9E-56 2.7E-60 520.7 23.5 361 555-1124 6-408 (434)
7 2nvu_B Maltose binding protein 100.0 5.2E-52 1.8E-56 526.7 27.6 359 557-1124 392-779 (805)
8 1y8q_A Ubiquitin-like 1 activa 100.0 5.3E-35 1.8E-39 336.0 18.6 165 555-730 16-180 (346)
9 1tt5_A APPBP1, amyloid protein 100.0 2.3E-35 7.9E-40 355.2 9.7 189 556-754 13-201 (531)
10 1tt5_B Ubiquitin-activating en 100.0 2.9E-32 1E-36 320.7 23.9 282 159-541 7-322 (434)
11 3h8v_A Ubiquitin-like modifier 100.0 1.8E-33 6.1E-38 314.7 12.8 164 556-728 14-193 (292)
12 1zud_1 Adenylyltransferase THI 100.0 1.9E-32 6.5E-37 301.7 12.9 165 555-728 6-173 (251)
13 1zud_1 Adenylyltransferase THI 100.0 6.9E-31 2.4E-35 289.3 22.3 152 155-308 3-160 (251)
14 2nvu_B Maltose binding protein 100.0 3E-30 1E-34 327.4 26.3 275 166-541 398-693 (805)
15 1jw9_B Molybdopterin biosynthe 100.0 4.5E-31 1.5E-35 290.5 12.7 164 556-728 10-176 (249)
16 3h5n_A MCCB protein; ubiquitin 100.0 3.1E-30 1.1E-34 297.2 16.8 166 555-729 92-265 (353)
17 3rui_A Ubiquitin-like modifier 100.0 1.1E-29 3.8E-34 288.3 12.5 158 563-728 22-199 (340)
18 1y8q_B Anthracycline-, ubiquit 100.0 9.9E-28 3.4E-32 291.3 29.7 147 164-312 3-154 (640)
19 3cmm_A Ubiquitin-activating en 100.0 8.3E-30 2.8E-34 324.7 10.4 185 554-756 6-193 (1015)
20 1jw9_B Molybdopterin biosynthe 99.9 1.7E-27 5.9E-32 261.9 18.6 153 154-308 5-163 (249)
21 3vh1_A Ubiquitin-like modifier 99.9 4.6E-28 1.6E-32 291.1 14.6 165 556-728 301-492 (598)
22 4gsl_A Ubiquitin-like modifier 99.9 2.6E-28 9E-33 293.0 12.3 160 563-728 314-491 (615)
23 3h8v_A Ubiquitin-like modifier 99.9 1.9E-27 6.3E-32 266.1 16.5 147 161-310 16-183 (292)
24 3h5n_A MCCB protein; ubiquitin 99.9 2.6E-26 8.7E-31 264.6 18.3 151 155-307 89-250 (353)
25 3rui_A Ubiquitin-like modifier 99.9 3.9E-24 1.3E-28 243.0 16.6 150 159-311 15-183 (340)
26 3vh1_A Ubiquitin-like modifier 99.9 3.2E-24 1.1E-28 257.8 16.0 153 155-310 297-475 (598)
27 2v31_A Ubiquitin-activating en 99.9 3.3E-25 1.1E-29 212.4 5.9 111 309-420 1-111 (112)
28 4gsl_A Ubiquitin-like modifier 99.9 1.4E-23 4.9E-28 252.2 15.3 144 166-312 314-476 (615)
29 1z7l_A Ubiquitin-activating en 98.4 7.4E-07 2.5E-11 98.7 10.5 55 826-889 207-263 (276)
30 3dfz_A SIRC, precorrin-2 dehyd 97.2 0.00075 2.6E-08 72.6 9.6 97 175-300 28-124 (223)
31 3jyo_A Quinate/shikimate dehyd 96.9 0.001 3.4E-08 74.2 7.1 79 572-682 124-202 (283)
32 3jyo_A Quinate/shikimate dehyd 96.8 0.0019 6.4E-08 72.0 7.8 79 175-272 124-202 (283)
33 3dfz_A SIRC, precorrin-2 dehyd 96.8 0.0021 7.2E-08 69.1 7.8 92 572-703 28-119 (223)
34 3ic5_A Putative saccharopine d 96.7 0.003 1E-07 59.3 7.8 96 575-706 5-100 (118)
35 1kyq_A Met8P, siroheme biosynt 96.6 0.0057 2E-07 67.7 10.3 119 175-303 10-146 (274)
36 1y8x_B Ubiquitin-activating en 96.6 0.0008 2.7E-08 63.0 2.7 53 1072-1124 9-72 (98)
37 1pjq_A CYSG, siroheme synthase 96.5 0.013 4.5E-07 69.5 12.8 100 175-302 9-108 (457)
38 3llv_A Exopolyphosphatase-rela 96.1 0.045 1.5E-06 53.4 12.4 92 176-297 4-101 (141)
39 3ic5_A Putative saccharopine d 96.1 0.027 9.3E-07 52.6 10.3 89 178-296 5-98 (118)
40 3tnl_A Shikimate dehydrogenase 95.8 0.013 4.3E-07 66.3 7.6 84 572-682 151-234 (315)
41 2hmt_A YUAA protein; RCK, KTN, 95.8 0.043 1.5E-06 53.0 10.6 89 174-290 2-97 (144)
42 3llv_A Exopolyphosphatase-rela 95.8 0.025 8.7E-07 55.2 8.6 93 574-701 5-97 (141)
43 2g1u_A Hypothetical protein TM 95.7 0.025 8.7E-07 56.5 8.5 93 571-697 15-107 (155)
44 2g1u_A Hypothetical protein TM 95.7 0.059 2E-06 53.7 11.2 93 173-288 14-108 (155)
45 3tum_A Shikimate dehydrogenase 95.7 0.017 5.9E-07 63.8 7.8 73 573-682 123-195 (269)
46 3t4e_A Quinate/shikimate dehyd 95.5 0.026 8.8E-07 63.7 8.7 80 176-272 146-228 (312)
47 3tnl_A Shikimate dehydrogenase 95.5 0.032 1.1E-06 63.0 9.4 80 176-272 152-234 (315)
48 3t4e_A Quinate/shikimate dehyd 95.5 0.024 8.4E-07 63.9 8.3 84 572-682 145-228 (312)
49 2hmt_A YUAA protein; RCK, KTN, 95.5 0.02 6.7E-07 55.5 6.6 37 572-614 3-39 (144)
50 4ina_A Saccharopine dehydrogen 95.4 0.028 9.7E-07 65.5 8.9 103 576-705 2-106 (405)
51 3tum_A Shikimate dehydrogenase 95.4 0.036 1.2E-06 61.2 9.1 73 176-272 123-195 (269)
52 1kyq_A Met8P, siroheme biosynt 95.3 0.018 6.3E-07 63.7 6.5 111 572-703 10-138 (274)
53 3e8x_A Putative NAD-dependent 95.1 0.03 1E-06 59.4 7.2 101 569-707 15-131 (236)
54 1id1_A Putative potassium chan 95.1 0.12 4.1E-06 51.3 11.0 89 176-289 1-96 (153)
55 1pjq_A CYSG, siroheme synthase 95.1 0.039 1.3E-06 65.5 8.6 92 572-702 9-100 (457)
56 1lss_A TRK system potassium up 94.9 0.11 3.7E-06 50.0 9.9 84 179-289 5-94 (140)
57 3abi_A Putative uncharacterize 94.7 0.048 1.6E-06 62.5 8.0 94 574-706 15-108 (365)
58 1lss_A TRK system potassium up 94.7 0.026 9E-07 54.4 5.0 89 576-698 5-93 (140)
59 3pwz_A Shikimate dehydrogenase 94.7 0.037 1.3E-06 61.1 6.7 74 572-683 117-190 (272)
60 2ph5_A Homospermidine synthase 94.6 0.031 1.1E-06 66.2 6.0 102 575-708 13-116 (480)
61 3o8q_A Shikimate 5-dehydrogena 94.6 0.043 1.5E-06 61.0 6.7 74 572-683 123-196 (281)
62 3pwz_A Shikimate dehydrogenase 94.5 0.051 1.8E-06 60.0 7.3 73 175-273 117-190 (272)
63 3o8q_A Shikimate 5-dehydrogena 94.4 0.072 2.5E-06 59.1 8.3 74 175-273 123-196 (281)
64 3oj0_A Glutr, glutamyl-tRNA re 94.4 0.023 8E-07 56.0 3.9 38 570-613 16-53 (144)
65 1id1_A Putative potassium chan 94.4 0.077 2.6E-06 52.7 7.7 94 574-698 2-95 (153)
66 3fwz_A Inner membrane protein 94.4 0.19 6.6E-06 49.2 10.4 90 178-295 7-102 (140)
67 3qsg_A NAD-binding phosphogluc 94.3 0.13 4.4E-06 57.7 10.1 35 177-211 23-57 (312)
68 3c85_A Putative glutathione-re 94.3 0.094 3.2E-06 53.6 8.2 87 176-290 37-131 (183)
69 2z2v_A Hypothetical protein PH 94.1 0.045 1.5E-06 63.0 5.9 94 574-706 15-108 (365)
70 2egg_A AROE, shikimate 5-dehyd 94.0 0.04 1.4E-06 61.6 5.0 37 572-613 138-174 (297)
71 3gvi_A Malate dehydrogenase; N 93.9 0.13 4.5E-06 58.2 9.2 76 176-273 5-84 (324)
72 3abi_A Putative uncharacterize 93.8 0.036 1.2E-06 63.6 4.3 88 177-297 15-107 (365)
73 3oj0_A Glutr, glutamyl-tRNA re 93.8 0.05 1.7E-06 53.6 4.8 72 177-275 20-91 (144)
74 3l4b_C TRKA K+ channel protien 93.8 0.08 2.7E-06 55.9 6.6 88 576-697 1-88 (218)
75 4ina_A Saccharopine dehydrogen 93.6 0.2 6.8E-06 58.4 10.2 95 179-296 2-105 (405)
76 1hyh_A L-hicdh, L-2-hydroxyiso 93.6 0.42 1.4E-05 53.3 12.5 75 179-276 2-81 (309)
77 3don_A Shikimate dehydrogenase 93.6 0.092 3.1E-06 58.2 6.9 38 572-614 114-151 (277)
78 3rku_A Oxidoreductase YMR226C; 93.5 0.26 9E-06 54.4 10.4 89 569-681 27-122 (287)
79 3p7m_A Malate dehydrogenase; p 93.5 0.29 9.8E-06 55.3 10.9 76 176-273 3-82 (321)
80 3e8x_A Putative NAD-dependent 93.2 0.25 8.6E-06 52.2 9.5 102 172-301 15-133 (236)
81 2raf_A Putative dinucleotide-b 93.2 0.15 5.3E-06 53.6 7.6 37 571-613 15-51 (209)
82 2d4a_B Malate dehydrogenase; a 93.2 0.49 1.7E-05 53.1 12.1 72 180-273 1-76 (308)
83 2egg_A AROE, shikimate 5-dehyd 93.1 0.056 1.9E-06 60.4 4.3 36 176-211 139-174 (297)
84 3l4b_C TRKA K+ channel protien 93.1 0.23 7.9E-06 52.3 8.9 92 180-299 2-99 (218)
85 3h2s_A Putative NADH-flavin re 93.0 0.14 4.8E-06 53.4 7.0 94 577-708 2-106 (224)
86 3fwz_A Inner membrane protein 93.0 0.17 5.8E-06 49.6 7.2 86 575-695 7-92 (140)
87 3slg_A PBGP3 protein; structur 92.9 0.076 2.6E-06 60.2 5.1 111 569-713 18-147 (372)
88 3dqp_A Oxidoreductase YLBE; al 92.8 0.24 8.3E-06 51.7 8.5 94 577-707 2-106 (219)
89 2axq_A Saccharopine dehydrogen 92.8 0.15 5.1E-06 60.6 7.6 100 572-706 20-119 (467)
90 3t4x_A Oxidoreductase, short c 92.8 0.13 4.6E-06 55.8 6.8 82 573-681 8-92 (267)
91 3dhn_A NAD-dependent epimerase 92.8 0.22 7.6E-06 52.0 8.2 97 576-709 5-114 (227)
92 3gpi_A NAD-dependent epimerase 92.8 0.23 7.8E-06 54.1 8.6 99 574-712 2-114 (286)
93 1p9l_A Dihydrodipicolinate red 92.7 0.13 4.5E-06 55.9 6.4 75 577-710 2-79 (245)
94 3o38_A Short chain dehydrogena 92.7 0.19 6.5E-06 54.3 7.8 64 572-661 19-84 (266)
95 3ruf_A WBGU; rossmann fold, UD 92.7 0.79 2.7E-05 51.2 13.0 109 174-304 21-156 (351)
96 3d0o_A L-LDH 1, L-lactate dehy 92.6 0.37 1.3E-05 54.2 10.2 78 173-273 1-83 (317)
97 1ldn_A L-lactate dehydrogenase 92.6 0.53 1.8E-05 52.9 11.5 72 178-272 6-82 (316)
98 2h78_A Hibadh, 3-hydroxyisobut 92.6 0.34 1.2E-05 53.6 9.7 90 576-708 4-99 (302)
99 1hdo_A Biliverdin IX beta redu 92.5 0.46 1.6E-05 48.4 10.0 34 178-212 3-37 (206)
100 3doj_A AT3G25530, dehydrogenas 92.5 0.12 4.3E-06 57.7 6.1 35 574-614 20-54 (310)
101 2aef_A Calcium-gated potassium 92.4 0.26 8.9E-06 52.4 8.2 85 177-291 8-98 (234)
102 1npy_A Hypothetical shikimate 92.4 0.22 7.4E-06 55.0 7.8 67 177-273 118-184 (271)
103 4ezb_A Uncharacterized conserv 92.4 0.44 1.5E-05 53.5 10.3 85 178-285 24-108 (317)
104 4e12_A Diketoreductase; oxidor 92.3 0.11 3.7E-06 57.4 5.2 33 576-614 5-37 (283)
105 1hdo_A Biliverdin IX beta redu 92.3 0.29 9.8E-06 50.0 8.1 34 575-614 3-37 (206)
106 2z2v_A Hypothetical protein PH 92.2 0.08 2.7E-06 60.9 4.1 87 177-296 15-106 (365)
107 2ewd_A Lactate dehydrogenase,; 92.2 0.67 2.3E-05 51.9 11.6 33 179-211 5-37 (317)
108 3onh_A Ubiquitin-activating en 92.1 0.16 5.6E-06 49.2 5.4 45 1077-1124 19-67 (127)
109 3don_A Shikimate dehydrogenase 92.1 0.38 1.3E-05 53.2 9.2 103 175-289 114-226 (277)
110 3vku_A L-LDH, L-lactate dehydr 92.0 0.35 1.2E-05 54.7 9.0 75 176-273 7-85 (326)
111 1y1p_A ARII, aldehyde reductas 92.0 0.59 2E-05 51.7 10.8 81 573-682 9-91 (342)
112 4aj2_A L-lactate dehydrogenase 92.0 0.27 9.3E-06 55.8 8.0 78 174-273 15-96 (331)
113 1oju_A MDH, malate dehydrogena 91.8 0.56 1.9E-05 52.3 10.2 72 180-273 2-78 (294)
114 1xg5_A ARPG836; short chain de 91.8 0.39 1.3E-05 52.2 8.9 65 572-661 29-94 (279)
115 3lf2_A Short chain oxidoreduct 91.8 0.33 1.1E-05 52.6 8.2 64 573-661 6-70 (265)
116 3dhn_A NAD-dependent epimerase 91.7 0.8 2.7E-05 47.7 10.9 94 179-303 5-116 (227)
117 3l9w_A Glutathione-regulated p 91.7 0.48 1.6E-05 55.4 9.9 90 178-295 4-99 (413)
118 4e21_A 6-phosphogluconate dehy 91.7 0.3 1E-05 56.0 8.0 115 176-301 20-143 (358)
119 2raf_A Putative dinucleotide-b 91.6 0.47 1.6E-05 49.9 9.0 38 173-211 14-51 (209)
120 3fbt_A Chorismate mutase and s 91.6 0.12 4.1E-06 57.4 4.5 36 573-613 120-155 (282)
121 2hk9_A Shikimate dehydrogenase 91.5 0.38 1.3E-05 52.9 8.4 36 175-211 126-161 (275)
122 4id9_A Short-chain dehydrogena 91.5 0.21 7.1E-06 55.9 6.4 39 569-613 13-52 (347)
123 2b69_A UDP-glucuronate decarbo 91.5 1 3.6E-05 50.2 12.2 104 176-304 25-146 (343)
124 2hjr_A Malate dehydrogenase; m 91.4 0.92 3.1E-05 51.3 11.6 74 177-272 13-90 (328)
125 3rku_A Oxidoreductase YMR226C; 91.4 1 3.4E-05 49.6 11.7 68 172-258 27-97 (287)
126 3pqe_A L-LDH, L-lactate dehydr 91.4 0.48 1.6E-05 53.6 9.2 75 178-273 5-82 (326)
127 3tl2_A Malate dehydrogenase; c 91.3 0.49 1.7E-05 53.3 9.2 78 176-273 6-87 (315)
128 3nyw_A Putative oxidoreductase 91.2 0.28 9.5E-06 52.9 6.7 65 572-661 4-70 (250)
129 3gpi_A NAD-dependent epimerase 91.2 0.54 1.9E-05 51.0 9.2 95 177-304 2-114 (286)
130 3ruf_A WBGU; rossmann fold, UD 91.1 0.45 1.5E-05 53.2 8.6 115 570-712 20-156 (351)
131 3qsg_A NAD-binding phosphogluc 91.1 0.32 1.1E-05 54.4 7.3 94 575-708 24-119 (312)
132 3d1l_A Putative NADP oxidoredu 91.1 0.65 2.2E-05 50.3 9.6 81 176-284 8-88 (266)
133 1ff9_A Saccharopine reductase; 91.0 0.2 7E-06 59.2 6.0 34 574-613 2-35 (450)
134 2x0j_A Malate dehydrogenase; o 91.0 0.85 2.9E-05 50.9 10.6 72 180-273 2-78 (294)
135 3hg7_A D-isomer specific 2-hyd 91.0 0.32 1.1E-05 55.0 7.3 37 572-614 137-173 (324)
136 4id9_A Short-chain dehydrogena 91.0 0.53 1.8E-05 52.5 9.1 39 172-211 13-52 (347)
137 3ldh_A Lactate dehydrogenase; 91.0 0.66 2.3E-05 52.6 9.8 73 178-272 21-97 (330)
138 1iy8_A Levodione reductase; ox 90.9 0.41 1.4E-05 51.8 7.9 65 572-661 10-75 (267)
139 4egb_A DTDP-glucose 4,6-dehydr 90.9 0.44 1.5E-05 53.2 8.3 36 176-211 22-59 (346)
140 4g65_A TRK system potassium up 90.9 0.13 4.3E-06 61.1 4.0 93 575-701 3-96 (461)
141 2dpo_A L-gulonate 3-dehydrogen 90.9 0.35 1.2E-05 54.6 7.4 152 576-762 7-179 (319)
142 3evt_A Phosphoglycerate dehydr 90.9 0.36 1.2E-05 54.6 7.5 36 572-613 134-169 (324)
143 4gbj_A 6-phosphogluconate dehy 90.8 1 3.6E-05 50.0 11.2 110 178-302 5-126 (297)
144 2pzm_A Putative nucleotide sug 90.8 0.35 1.2E-05 53.9 7.3 37 571-613 16-53 (330)
145 3obb_A Probable 3-hydroxyisobu 90.8 1.2 4.1E-05 49.7 11.7 111 179-302 4-126 (300)
146 3pp8_A Glyoxylate/hydroxypyruv 90.8 0.29 1E-05 55.1 6.7 36 572-613 136-171 (315)
147 1lu9_A Methylene tetrahydromet 90.8 0.26 8.9E-06 54.4 6.2 80 573-683 117-197 (287)
148 3qiv_A Short-chain dehydrogena 90.7 0.49 1.7E-05 50.5 8.2 63 572-661 6-69 (253)
149 4ezb_A Uncharacterized conserv 90.7 0.74 2.5E-05 51.6 9.9 99 574-708 23-123 (317)
150 1lld_A L-lactate dehydrogenase 90.7 1.3 4.6E-05 49.1 12.0 74 178-273 7-84 (319)
151 2bka_A CC3, TAT-interacting pr 90.7 0.84 2.9E-05 48.1 9.8 38 572-613 15-53 (242)
152 4e12_A Diketoreductase; oxidor 90.5 0.78 2.7E-05 50.4 9.8 33 178-211 4-36 (283)
153 1ur5_A Malate dehydrogenase; o 90.5 1.4 4.8E-05 49.2 12.0 73 179-273 3-79 (309)
154 3slg_A PBGP3 protein; structur 90.5 0.39 1.3E-05 54.3 7.5 106 171-305 17-147 (372)
155 3o26_A Salutaridine reductase; 90.5 0.42 1.4E-05 52.3 7.6 85 572-682 9-99 (311)
156 2cvz_A Dehydrogenase, 3-hydrox 90.4 0.84 2.9E-05 49.7 9.9 87 576-707 2-91 (289)
157 2v6b_A L-LDH, L-lactate dehydr 90.4 1.2 4.2E-05 49.6 11.3 71 180-273 2-76 (304)
158 3d1l_A Putative NADP oxidoredu 90.3 0.29 1E-05 53.0 6.0 93 573-706 8-102 (266)
159 3ew7_A LMO0794 protein; Q8Y8U8 90.2 0.74 2.5E-05 47.5 8.8 93 576-707 1-103 (221)
160 3gvi_A Malate dehydrogenase; N 90.2 0.47 1.6E-05 53.7 7.7 37 572-613 4-40 (324)
161 3tri_A Pyrroline-5-carboxylate 90.2 0.37 1.3E-05 53.1 6.7 82 575-695 3-84 (280)
162 4egb_A DTDP-glucose 4,6-dehydr 90.1 0.37 1.3E-05 53.8 6.8 37 573-613 22-59 (346)
163 3r6d_A NAD-dependent epimerase 90.1 0.51 1.8E-05 49.2 7.5 90 576-699 6-99 (221)
164 3pef_A 6-phosphogluconate dehy 90.0 0.39 1.3E-05 52.8 6.8 33 576-614 2-34 (287)
165 3dqp_A Oxidoreductase YLBE; al 89.9 1.2 4.2E-05 46.2 10.3 91 180-302 2-109 (219)
166 3m2p_A UDP-N-acetylglucosamine 89.8 0.48 1.7E-05 52.1 7.4 33 575-613 2-35 (311)
167 2gf2_A Hibadh, 3-hydroxyisobut 89.8 0.51 1.7E-05 51.8 7.5 31 577-613 2-32 (296)
168 3l9w_A Glutathione-regulated p 89.8 0.32 1.1E-05 56.9 6.1 91 575-700 4-94 (413)
169 3g0o_A 3-hydroxyisobutyrate de 89.8 0.72 2.5E-05 51.2 8.8 33 575-613 7-39 (303)
170 3tri_A Pyrroline-5-carboxylate 89.8 0.74 2.5E-05 50.7 8.7 81 177-285 2-84 (280)
171 1a5z_A L-lactate dehydrogenase 89.7 1.6 5.4E-05 49.0 11.5 71 180-273 2-76 (319)
172 1p77_A Shikimate 5-dehydrogena 89.7 0.59 2E-05 51.3 7.9 71 176-273 117-189 (272)
173 3ius_A Uncharacterized conserv 89.7 0.45 1.5E-05 51.5 6.9 97 575-712 5-108 (286)
174 3dtt_A NADP oxidoreductase; st 89.7 1 3.6E-05 48.3 9.6 39 173-212 14-52 (245)
175 3pdu_A 3-hydroxyisobutyrate de 89.6 0.89 3.1E-05 49.9 9.3 90 576-708 2-97 (287)
176 3p7m_A Malate dehydrogenase; p 89.4 0.54 1.9E-05 53.1 7.4 35 574-613 4-38 (321)
177 3qvo_A NMRA family protein; st 89.4 0.74 2.5E-05 48.7 8.1 101 574-710 22-128 (236)
178 1xu9_A Corticosteroid 11-beta- 89.4 0.68 2.3E-05 50.6 8.0 36 572-613 25-61 (286)
179 2b69_A UDP-glucuronate decarbo 89.2 0.77 2.6E-05 51.2 8.5 37 571-613 23-60 (343)
180 2gn4_A FLAA1 protein, UDP-GLCN 89.2 0.92 3.1E-05 51.2 9.2 80 573-683 19-100 (344)
181 3phh_A Shikimate dehydrogenase 89.1 0.35 1.2E-05 53.3 5.4 33 178-211 118-150 (269)
182 3gt0_A Pyrroline-5-carboxylate 89.1 0.45 1.5E-05 51.2 6.2 81 576-694 3-83 (247)
183 1ez4_A Lactate dehydrogenase; 89.1 1.5 5.1E-05 49.4 10.7 72 179-273 6-81 (318)
184 1sb8_A WBPP; epimerase, 4-epim 89.1 0.64 2.2E-05 52.1 7.7 114 572-711 24-157 (352)
185 1y1p_A ARII, aldehyde reductas 89.0 2.6 8.8E-05 46.5 12.6 107 176-304 9-137 (342)
186 3ioy_A Short-chain dehydrogena 89.0 0.56 1.9E-05 52.5 7.1 35 573-613 6-41 (319)
187 3ius_A Uncharacterized conserv 89.0 0.94 3.2E-05 49.0 8.8 97 178-304 5-108 (286)
188 3rkr_A Short chain oxidoreduct 89.0 0.35 1.2E-05 52.3 5.3 63 572-661 26-89 (262)
189 3qvo_A NMRA family protein; st 88.9 1.4 4.9E-05 46.5 10.0 98 178-304 23-130 (236)
190 1nvt_A Shikimate 5'-dehydrogen 88.9 0.43 1.5E-05 52.8 6.0 75 175-273 125-202 (287)
191 3vps_A TUNA, NAD-dependent epi 88.9 0.38 1.3E-05 52.8 5.6 37 572-614 4-41 (321)
192 3svt_A Short-chain type dehydr 88.9 0.86 2.9E-05 49.7 8.4 65 572-661 8-74 (281)
193 3vku_A L-LDH, L-lactate dehydr 88.9 0.82 2.8E-05 51.7 8.4 75 574-683 8-85 (326)
194 3i1j_A Oxidoreductase, short c 88.9 0.65 2.2E-05 49.3 7.2 36 572-613 11-47 (247)
195 3m2p_A UDP-N-acetylglucosamine 88.8 1.4 4.6E-05 48.5 10.0 94 178-304 2-114 (311)
196 3gaf_A 7-alpha-hydroxysteroid 88.8 0.66 2.3E-05 50.0 7.3 63 572-661 9-72 (256)
197 3u62_A Shikimate dehydrogenase 88.8 0.33 1.1E-05 53.0 4.8 35 573-613 107-141 (253)
198 1ks9_A KPA reductase;, 2-dehyd 88.8 1.3 4.3E-05 48.1 9.7 83 180-285 2-84 (291)
199 3c85_A Putative glutathione-re 88.7 0.25 8.6E-06 50.4 3.7 36 573-614 37-73 (183)
200 3fi9_A Malate dehydrogenase; s 88.7 0.72 2.5E-05 52.6 7.8 77 176-273 6-85 (343)
201 2pzm_A Putative nucleotide sug 88.7 1.6 5.5E-05 48.5 10.7 36 175-211 17-53 (330)
202 1t2d_A LDH-P, L-lactate dehydr 88.7 1.4 4.7E-05 49.7 10.1 72 179-272 5-80 (322)
203 2z1n_A Dehydrogenase; reductas 88.6 0.81 2.8E-05 49.2 7.8 35 573-613 5-40 (260)
204 3ucx_A Short chain dehydrogena 88.6 0.97 3.3E-05 48.8 8.5 36 572-613 8-44 (264)
205 3uve_A Carveol dehydrogenase ( 88.6 1.3 4.3E-05 48.4 9.5 79 572-661 8-87 (286)
206 3kkj_A Amine oxidase, flavin-c 88.6 0.27 9.1E-06 50.6 3.8 33 575-613 2-34 (336)
207 2hjr_A Malate dehydrogenase; m 88.5 0.69 2.4E-05 52.3 7.5 35 574-613 13-47 (328)
208 3ko8_A NAD-dependent epimerase 88.5 0.76 2.6E-05 50.3 7.7 32 576-613 1-33 (312)
209 4dll_A 2-hydroxy-3-oxopropiona 88.5 0.92 3.1E-05 50.8 8.5 95 572-709 28-127 (320)
210 3ggo_A Prephenate dehydrogenas 88.5 2.6 8.9E-05 47.2 12.1 83 178-287 33-117 (314)
211 3sju_A Keto reductase; short-c 88.4 0.88 3E-05 49.7 8.1 63 572-661 21-84 (279)
212 2ph5_A Homospermidine synthase 88.4 1.8 6.3E-05 51.2 11.1 91 178-296 13-112 (480)
213 2gn4_A FLAA1 protein, UDP-GLCN 88.4 2.3 7.8E-05 47.9 11.7 74 176-272 19-99 (344)
214 1x7d_A Ornithine cyclodeaminas 88.3 0.44 1.5E-05 54.5 5.7 142 502-684 54-204 (350)
215 4e21_A 6-phosphogluconate dehy 88.3 0.93 3.2E-05 51.9 8.5 36 573-614 20-55 (358)
216 3pk0_A Short-chain dehydrogena 88.3 0.66 2.3E-05 50.2 6.9 64 572-661 7-71 (262)
217 2bll_A Protein YFBG; decarboxy 88.3 0.98 3.4E-05 50.1 8.5 32 576-613 1-34 (345)
218 2d5c_A AROE, shikimate 5-dehyd 88.2 1.3 4.6E-05 47.9 9.3 35 175-211 114-148 (263)
219 3i6i_A Putative leucoanthocyan 88.2 1.3 4.4E-05 49.6 9.5 102 573-703 8-115 (346)
220 3rft_A Uronate dehydrogenase; 88.2 0.51 1.8E-05 51.0 6.0 34 575-614 3-37 (267)
221 2pv7_A T-protein [includes: ch 88.2 0.94 3.2E-05 50.2 8.2 32 576-613 22-54 (298)
222 3tjr_A Short chain dehydrogena 88.2 0.86 2.9E-05 50.4 7.9 35 573-613 29-64 (301)
223 3pqe_A L-LDH, L-lactate dehydr 88.2 0.73 2.5E-05 52.1 7.4 75 575-682 5-81 (326)
224 1sby_A Alcohol dehydrogenase; 88.1 1.1 3.7E-05 47.9 8.4 84 573-682 3-92 (254)
225 1yb4_A Tartronic semialdehyde 88.1 0.73 2.5E-05 50.5 7.2 30 576-611 4-33 (295)
226 2d5c_A AROE, shikimate 5-dehyd 88.0 0.84 2.9E-05 49.6 7.5 35 572-613 114-148 (263)
227 3tox_A Short chain dehydrogena 88.0 0.57 1.9E-05 51.4 6.2 36 572-613 5-41 (280)
228 2f1k_A Prephenate dehydrogenas 87.9 2 6.9E-05 46.6 10.5 30 180-210 2-31 (279)
229 2uyy_A N-PAC protein; long-cha 87.8 0.69 2.4E-05 51.4 6.9 32 576-613 31-62 (316)
230 3rwb_A TPLDH, pyridoxal 4-dehy 87.8 0.76 2.6E-05 49.2 7.0 36 572-613 3-39 (247)
231 4da9_A Short-chain dehydrogena 87.8 0.67 2.3E-05 50.8 6.7 85 571-681 25-114 (280)
232 4g65_A TRK system potassium up 87.8 0.69 2.4E-05 54.8 7.2 107 560-703 223-329 (461)
233 3l6d_A Putative oxidoreductase 87.8 0.84 2.9E-05 50.8 7.5 94 574-710 8-105 (306)
234 3gvx_A Glycerate dehydrogenase 87.8 1.1 3.9E-05 49.7 8.5 36 572-613 119-154 (290)
235 3vps_A TUNA, NAD-dependent epi 87.8 1.3 4.3E-05 48.5 8.9 37 175-212 4-41 (321)
236 2dc1_A L-aspartate dehydrogena 87.8 0.86 2.9E-05 48.6 7.3 78 577-706 2-81 (236)
237 1bg6_A N-(1-D-carboxylethyl)-L 87.8 1.7 5.7E-05 48.9 10.1 33 178-211 4-36 (359)
238 2x4g_A Nucleoside-diphosphate- 87.8 0.92 3.1E-05 50.3 7.8 32 576-613 14-46 (342)
239 3tfo_A Putative 3-oxoacyl-(acy 87.8 0.85 2.9E-05 49.7 7.4 62 573-661 2-64 (264)
240 2ew2_A 2-dehydropantoate 2-red 87.8 1.8 6.3E-05 47.4 10.2 31 179-210 4-34 (316)
241 3pgx_A Carveol dehydrogenase; 87.7 1.4 4.7E-05 48.0 9.1 76 572-661 12-88 (280)
242 3nep_X Malate dehydrogenase; h 87.7 1.6 5.4E-05 49.1 9.7 72 180-273 2-78 (314)
243 3phh_A Shikimate dehydrogenase 87.7 0.82 2.8E-05 50.4 7.2 33 575-613 118-150 (269)
244 4egf_A L-xylulose reductase; s 87.7 0.68 2.3E-05 50.2 6.5 36 572-613 17-53 (266)
245 3qlj_A Short chain dehydrogena 87.6 0.61 2.1E-05 52.1 6.3 74 571-661 23-97 (322)
246 2xxj_A L-LDH, L-lactate dehydr 87.6 1.5 5.2E-05 49.1 9.5 72 179-273 1-76 (310)
247 4e6p_A Probable sorbitol dehyd 87.6 0.91 3.1E-05 48.9 7.4 36 572-613 5-41 (259)
248 3sxp_A ADP-L-glycero-D-mannohe 87.5 2.7 9.3E-05 47.2 11.7 112 176-304 8-143 (362)
249 1lnq_A MTHK channels, potassiu 87.4 1.1 3.9E-05 50.2 8.4 88 178-295 115-208 (336)
250 2zqz_A L-LDH, L-lactate dehydr 87.4 1.7 5.8E-05 49.1 9.8 73 178-273 9-85 (326)
251 3lk7_A UDP-N-acetylmuramoylala 87.3 1.4 4.8E-05 51.9 9.4 94 176-296 7-101 (451)
252 2rcy_A Pyrroline carboxylate r 87.3 0.93 3.2E-05 48.7 7.3 34 178-211 4-40 (262)
253 3nzo_A UDP-N-acetylglucosamine 87.3 5.7 0.00019 45.7 14.4 80 174-272 31-120 (399)
254 2zat_A Dehydrogenase/reductase 87.2 0.9 3.1E-05 48.8 7.2 36 572-613 11-47 (260)
255 2g5c_A Prephenate dehydrogenas 87.2 3.4 0.00012 44.8 11.9 81 179-286 2-84 (281)
256 4huj_A Uncharacterized protein 87.2 1.5 5.1E-05 46.3 8.7 32 576-613 24-56 (220)
257 3r1i_A Short-chain type dehydr 87.2 0.81 2.8E-05 50.0 6.8 36 572-613 29-65 (276)
258 4ibo_A Gluconate dehydrogenase 87.2 0.68 2.3E-05 50.5 6.2 36 572-613 23-59 (271)
259 3jtm_A Formate dehydrogenase, 87.2 0.61 2.1E-05 53.3 6.0 36 572-613 161-196 (351)
260 1gee_A Glucose 1-dehydrogenase 87.1 1 3.4E-05 48.2 7.4 35 572-612 4-39 (261)
261 2pv7_A T-protein [includes: ch 87.1 1.1 3.9E-05 49.6 8.0 32 179-211 22-54 (298)
262 3grp_A 3-oxoacyl-(acyl carrier 87.1 0.56 1.9E-05 51.0 5.4 37 570-612 22-59 (266)
263 2cvz_A Dehydrogenase, 3-hydrox 87.1 1.5 5.1E-05 47.7 8.9 66 179-276 2-67 (289)
264 1x7d_A Ornithine cyclodeaminas 87.1 1.2 4.1E-05 50.9 8.3 77 176-274 127-204 (350)
265 1sb8_A WBPP; epimerase, 4-epim 87.0 3.2 0.00011 46.3 11.8 109 176-304 25-158 (352)
266 3sxp_A ADP-L-glycero-D-mannohe 86.9 1 3.5E-05 50.7 7.7 35 573-613 8-45 (362)
267 4dqv_A Probable peptide synthe 86.9 1.5 5.3E-05 51.7 9.5 124 573-710 71-217 (478)
268 2q1s_A Putative nucleotide sug 86.9 3.2 0.00011 47.0 11.8 103 176-305 30-157 (377)
269 3tsc_A Putative oxidoreductase 86.8 0.94 3.2E-05 49.3 7.1 76 572-661 8-84 (277)
270 1lu9_A Methylene tetrahydromet 86.8 1.2 4E-05 49.1 7.9 34 176-210 117-151 (287)
271 3v2h_A D-beta-hydroxybutyrate 86.8 1.2 4.2E-05 48.7 8.0 36 571-612 21-57 (281)
272 2x0j_A Malate dehydrogenase; o 86.8 1.9 6.5E-05 48.1 9.6 33 576-612 1-33 (294)
273 3c24_A Putative oxidoreductase 86.8 2 6.9E-05 47.0 9.8 75 179-284 12-87 (286)
274 2jah_A Clavulanic acid dehydro 86.8 1.3 4.3E-05 47.4 7.9 34 573-612 5-39 (247)
275 2ae2_A Protein (tropinone redu 86.8 1.4 4.8E-05 47.3 8.4 35 573-613 7-42 (260)
276 3enk_A UDP-glucose 4-epimerase 86.8 0.78 2.7E-05 51.0 6.5 33 575-613 5-38 (341)
277 3r6d_A NAD-dependent epimerase 86.8 2.3 7.7E-05 44.2 9.8 97 179-303 6-112 (221)
278 3sx2_A Putative 3-ketoacyl-(ac 86.8 1.8 6.2E-05 46.9 9.3 96 572-682 10-110 (278)
279 2zyd_A 6-phosphogluconate dehy 86.7 1.4 4.9E-05 52.3 9.1 37 173-210 10-46 (480)
280 2bka_A CC3, TAT-interacting pr 86.7 3.8 0.00013 42.9 11.6 36 176-211 16-53 (242)
281 1p9l_A Dihydrodipicolinate red 86.7 1.5 5.2E-05 47.5 8.5 101 180-306 2-111 (245)
282 1yb1_A 17-beta-hydroxysteroid 86.7 1.1 3.9E-05 48.5 7.6 36 572-613 28-64 (272)
283 3h7a_A Short chain dehydrogena 86.7 0.91 3.1E-05 48.8 6.7 36 572-613 4-40 (252)
284 2q1s_A Putative nucleotide sug 86.7 1.4 4.7E-05 50.1 8.6 37 572-613 29-66 (377)
285 3t4x_A Oxidoreductase, short c 86.6 1.9 6.4E-05 46.7 9.3 63 176-258 8-71 (267)
286 1vl6_A Malate oxidoreductase; 86.6 0.57 2E-05 54.0 5.3 37 175-211 189-225 (388)
287 3awd_A GOX2181, putative polyo 86.6 1.2 4E-05 47.5 7.6 35 573-613 11-46 (260)
288 3ngx_A Bifunctional protein fo 86.6 0.61 2.1E-05 51.4 5.3 33 573-611 148-181 (276)
289 4iin_A 3-ketoacyl-acyl carrier 86.6 0.86 2.9E-05 49.4 6.5 35 572-612 26-61 (271)
290 2yq5_A D-isomer specific 2-hyd 86.5 1.4 4.9E-05 50.1 8.5 37 572-614 145-181 (343)
291 1guz_A Malate dehydrogenase; o 86.5 4.5 0.00015 45.1 12.5 72 180-273 2-78 (310)
292 3obb_A Probable 3-hydroxyisobu 86.5 1.6 5.4E-05 48.7 8.7 31 576-612 4-34 (300)
293 4imr_A 3-oxoacyl-(acyl-carrier 86.4 1 3.5E-05 49.2 7.1 39 569-613 27-66 (275)
294 3lyl_A 3-oxoacyl-(acyl-carrier 86.4 0.74 2.5E-05 48.9 5.9 61 573-660 3-64 (247)
295 1oaa_A Sepiapterin reductase; 86.4 0.76 2.6E-05 49.3 6.0 64 573-661 4-71 (259)
296 4fc7_A Peroxisomal 2,4-dienoyl 86.4 1.1 3.7E-05 48.9 7.2 36 572-613 24-60 (277)
297 1fmc_A 7 alpha-hydroxysteroid 86.4 0.95 3.2E-05 48.1 6.7 34 573-612 9-43 (255)
298 3v2g_A 3-oxoacyl-[acyl-carrier 86.4 1.3 4.6E-05 48.1 8.0 35 572-612 28-63 (271)
299 4fn4_A Short chain dehydrogena 86.3 0.91 3.1E-05 49.5 6.5 83 572-681 4-91 (254)
300 2d4a_B Malate dehydrogenase; a 86.3 1.6 5.5E-05 48.8 8.7 32 577-613 1-32 (308)
301 3fbt_A Chorismate mutase and s 86.3 0.59 2E-05 51.8 5.1 36 176-211 120-155 (282)
302 2x6t_A ADP-L-glycero-D-manno-h 86.3 1.5 5.2E-05 49.1 8.6 39 173-211 41-80 (357)
303 2h78_A Hibadh, 3-hydroxyisobut 86.2 1.2 4.1E-05 49.1 7.7 32 179-211 4-35 (302)
304 1o0s_A NAD-ME, NAD-dependent m 86.2 0.34 1.2E-05 58.2 3.2 78 571-653 316-404 (605)
305 3imf_A Short chain dehydrogena 86.2 0.76 2.6E-05 49.5 5.8 36 572-613 3-39 (257)
306 1ldn_A L-lactate dehydrogenase 86.2 1.8 6.3E-05 48.4 9.2 34 576-613 7-40 (316)
307 3nzo_A UDP-N-acetylglucosamine 86.2 2.1 7.1E-05 49.4 9.9 89 568-683 28-121 (399)
308 3ggo_A Prephenate dehydrogenas 86.0 2.1 7E-05 48.0 9.5 94 575-707 33-129 (314)
309 2z1m_A GDP-D-mannose dehydrata 86.0 0.66 2.3E-05 51.4 5.4 34 574-613 2-36 (345)
310 4a26_A Putative C-1-tetrahydro 86.0 0.72 2.4E-05 51.5 5.5 35 572-612 162-197 (300)
311 1o6z_A MDH, malate dehydrogena 85.9 5.8 0.0002 44.1 13.0 73 180-273 2-79 (303)
312 3nyw_A Putative oxidoreductase 85.9 2.1 7.3E-05 45.8 9.2 62 175-256 4-67 (250)
313 1a4i_A Methylenetetrahydrofola 85.9 0.81 2.8E-05 51.1 5.9 34 572-611 162-196 (301)
314 3hn2_A 2-dehydropantoate 2-red 85.9 0.38 1.3E-05 53.7 3.3 32 179-211 3-34 (312)
315 3v8b_A Putative dehydrogenase, 85.9 1.4 4.8E-05 48.3 7.9 36 572-613 25-61 (283)
316 3ew7_A LMO0794 protein; Q8Y8U8 85.8 1.4 4.7E-05 45.5 7.4 92 180-301 2-105 (221)
317 2ywl_A Thioredoxin reductase r 85.8 0.48 1.7E-05 47.7 3.8 32 577-614 3-34 (180)
318 3l77_A Short-chain alcohol deh 85.8 1.5 5E-05 46.2 7.7 81 575-681 2-87 (235)
319 3u62_A Shikimate dehydrogenase 85.8 0.52 1.8E-05 51.4 4.2 36 176-212 107-142 (253)
320 3ksu_A 3-oxoacyl-acyl carrier 85.8 1.1 3.7E-05 48.5 6.8 66 572-661 8-74 (262)
321 1dih_A Dihydrodipicolinate red 85.7 1.1 3.6E-05 49.5 6.7 100 574-710 4-106 (273)
322 3ego_A Probable 2-dehydropanto 85.7 1.2 4.1E-05 49.6 7.3 31 178-210 2-32 (307)
323 3i83_A 2-dehydropantoate 2-red 85.6 0.98 3.4E-05 50.5 6.6 32 179-211 3-34 (320)
324 3ftp_A 3-oxoacyl-[acyl-carrier 85.6 0.98 3.4E-05 49.2 6.4 36 572-613 25-61 (270)
325 1mxh_A Pteridine reductase 2; 85.6 1.4 4.8E-05 47.7 7.6 36 571-612 7-43 (276)
326 1oju_A MDH, malate dehydrogena 85.6 2 6.7E-05 47.9 8.9 34 576-613 1-34 (294)
327 3g0o_A 3-hydroxyisobutyrate de 85.6 1.8 6E-05 48.0 8.5 33 178-211 7-39 (303)
328 1xg5_A ARPG836; short chain de 85.6 2.8 9.5E-05 45.4 10.0 63 175-257 29-92 (279)
329 1yxm_A Pecra, peroxisomal tran 85.5 1.3 4.5E-05 48.6 7.4 35 572-612 15-50 (303)
330 1t2d_A LDH-P, L-lactate dehydr 85.5 1.9 6.5E-05 48.6 8.9 33 576-613 5-37 (322)
331 3i6i_A Putative leucoanthocyan 85.5 1.9 6.5E-05 48.2 8.9 93 176-289 8-110 (346)
332 1i36_A Conserved hypothetical 85.5 2.4 8.1E-05 45.6 9.4 75 180-284 2-76 (264)
333 1zcj_A Peroxisomal bifunctiona 85.5 4.7 0.00016 47.6 12.6 32 179-211 38-69 (463)
334 1zem_A Xylitol dehydrogenase; 85.4 1.4 4.9E-05 47.4 7.6 36 572-613 4-40 (262)
335 1pzg_A LDH, lactate dehydrogen 85.4 2.5 8.4E-05 47.8 9.8 73 179-272 10-86 (331)
336 3afn_B Carbonyl reductase; alp 85.4 1.3 4.4E-05 47.0 7.1 36 572-613 4-40 (258)
337 1rkx_A CDP-glucose-4,6-dehydra 85.3 4.7 0.00016 45.0 12.1 37 174-211 5-42 (357)
338 3u9l_A 3-oxoacyl-[acyl-carrier 85.3 1.5 5E-05 49.3 7.8 88 573-682 3-95 (324)
339 1vl6_A Malate oxidoreductase; 85.3 0.44 1.5E-05 55.0 3.5 37 572-613 189-225 (388)
340 3r3s_A Oxidoreductase; structu 85.2 1.4 4.7E-05 48.6 7.5 36 572-613 46-82 (294)
341 1gq2_A Malic enzyme; oxidoredu 85.2 0.32 1.1E-05 58.1 2.4 78 571-653 278-366 (555)
342 2v6b_A L-LDH, L-lactate dehydr 85.2 2.2 7.6E-05 47.5 9.2 34 576-613 1-34 (304)
343 2z1m_A GDP-D-mannose dehydrata 85.2 2 6.9E-05 47.4 8.9 35 176-211 1-36 (345)
344 3doj_A AT3G25530, dehydrogenas 85.2 1.4 4.8E-05 49.1 7.5 37 176-213 19-55 (310)
345 2x4g_A Nucleoside-diphosphate- 85.2 3.3 0.00011 45.7 10.7 96 180-304 15-131 (342)
346 3gvc_A Oxidoreductase, probabl 85.1 1 3.6E-05 49.2 6.3 37 571-613 25-62 (277)
347 2bgk_A Rhizome secoisolaricire 85.1 1.5 5.1E-05 47.2 7.6 35 572-612 13-48 (278)
348 2j6i_A Formate dehydrogenase; 85.1 0.95 3.2E-05 52.0 6.2 84 573-681 162-256 (364)
349 1ez4_A Lactate dehydrogenase; 85.1 2.5 8.6E-05 47.5 9.6 73 576-683 6-81 (318)
350 2a9f_A Putative malic enzyme ( 85.1 0.76 2.6E-05 53.1 5.3 38 175-212 185-222 (398)
351 4fs3_A Enoyl-[acyl-carrier-pro 85.1 1.6 5.3E-05 47.2 7.6 36 572-613 3-41 (256)
352 3p2o_A Bifunctional protein fo 85.0 0.93 3.2E-05 50.2 5.8 34 572-611 157-191 (285)
353 3hwr_A 2-dehydropantoate 2-red 85.0 2.4 8.1E-05 47.4 9.3 31 177-208 18-48 (318)
354 2i99_A MU-crystallin homolog; 84.9 0.59 2E-05 52.3 4.3 36 572-612 132-168 (312)
355 1y6j_A L-lactate dehydrogenase 84.9 1.4 4.8E-05 49.5 7.4 73 178-273 7-83 (318)
356 3ai3_A NADPH-sorbose reductase 84.9 1.4 4.8E-05 47.4 7.2 35 573-613 5-40 (263)
357 2c5a_A GDP-mannose-3', 5'-epim 84.9 1.3 4.5E-05 50.4 7.3 33 575-613 29-62 (379)
358 3n74_A 3-ketoacyl-(acyl-carrie 84.9 1.5 5.1E-05 46.9 7.4 36 572-613 6-42 (261)
359 3rih_A Short chain dehydrogena 84.9 0.92 3.2E-05 50.2 5.8 36 572-613 38-74 (293)
360 2qyt_A 2-dehydropantoate 2-red 84.9 1.7 6E-05 47.8 8.1 31 180-210 10-45 (317)
361 2rhc_B Actinorhodin polyketide 84.8 1.8 6.1E-05 47.1 8.1 35 573-613 20-55 (277)
362 3o38_A Short chain dehydrogena 84.8 2 6.9E-05 46.1 8.4 34 176-210 20-55 (266)
363 1b0a_A Protein (fold bifunctio 84.8 0.74 2.5E-05 51.0 4.9 34 572-611 156-190 (288)
364 2gdz_A NAD+-dependent 15-hydro 84.7 1.2 4E-05 48.1 6.5 35 573-613 5-40 (267)
365 4hb9_A Similarities with proba 84.7 0.55 1.9E-05 53.2 3.9 33 575-613 1-33 (412)
366 1omo_A Alanine dehydrogenase; 84.7 1.5 5.1E-05 49.4 7.5 73 574-684 124-197 (322)
367 1rkx_A CDP-glucose-4,6-dehydra 84.7 1.2 4.1E-05 49.9 6.7 37 571-613 5-42 (357)
368 3d0o_A L-LDH 1, L-lactate dehy 84.6 2.3 7.7E-05 47.8 8.9 37 573-613 4-40 (317)
369 2nac_A NAD-dependent formate d 84.6 1.1 3.9E-05 51.8 6.6 35 572-612 188-222 (393)
370 3e48_A Putative nucleoside-dip 84.5 4.3 0.00015 43.8 10.9 93 180-301 2-108 (289)
371 4f6c_A AUSA reductase domain p 84.5 1.5 5.1E-05 50.7 7.6 112 575-713 69-202 (427)
372 4gwg_A 6-phosphogluconate dehy 84.5 1.4 4.6E-05 52.6 7.3 118 178-301 4-131 (484)
373 3kkj_A Amine oxidase, flavin-c 84.5 0.76 2.6E-05 47.1 4.6 33 178-211 2-34 (336)
374 2izz_A Pyrroline-5-carboxylate 84.4 1.3 4.3E-05 49.7 6.7 80 178-284 22-104 (322)
375 1wma_A Carbonyl reductase [NAD 84.4 1.1 3.6E-05 48.0 5.9 34 574-613 3-38 (276)
376 2qq5_A DHRS1, dehydrogenase/re 84.4 0.83 2.8E-05 49.1 5.1 35 573-613 3-38 (260)
377 4e5n_A Thermostable phosphite 84.4 0.84 2.9E-05 51.7 5.3 36 572-613 142-177 (330)
378 3ehe_A UDP-glucose 4-epimerase 84.3 1.9 6.7E-05 47.2 8.2 23 576-598 2-25 (313)
379 1spx_A Short-chain reductase f 84.3 1.3 4.3E-05 48.1 6.5 35 573-613 4-39 (278)
380 3ko8_A NAD-dependent epimerase 84.3 3.9 0.00013 44.6 10.5 32 179-211 1-33 (312)
381 2i99_A MU-crystallin homolog; 84.3 0.96 3.3E-05 50.6 5.6 35 176-210 133-168 (312)
382 2axq_A Saccharopine dehydrogen 84.2 2.2 7.5E-05 50.6 9.0 93 175-296 20-117 (467)
383 4gx0_A TRKA domain protein; me 84.1 4.8 0.00016 48.5 12.2 86 179-296 349-440 (565)
384 3oet_A Erythronate-4-phosphate 84.1 1.4 4.7E-05 50.9 7.0 35 572-612 116-150 (381)
385 3lf2_A Short chain oxidoreduct 84.1 3 0.0001 45.0 9.4 62 176-257 6-68 (265)
386 3l07_A Bifunctional protein fo 84.1 1.1 3.8E-05 49.6 5.9 34 572-611 158-192 (285)
387 2c5a_A GDP-mannose-3', 5'-epim 84.0 4 0.00014 46.2 10.9 33 178-211 29-62 (379)
388 2cuk_A Glycerate dehydrogenase 84.0 0.5 1.7E-05 53.1 3.2 36 572-613 141-176 (311)
389 4fgs_A Probable dehydrogenase 84.0 0.91 3.1E-05 50.0 5.2 37 571-613 25-62 (273)
390 3osu_A 3-oxoacyl-[acyl-carrier 84.0 1.5 5.1E-05 46.7 6.8 62 574-661 3-65 (246)
391 3qy9_A DHPR, dihydrodipicolina 84.0 2.3 8E-05 46.0 8.3 82 576-710 4-86 (243)
392 3enk_A UDP-glucose 4-epimerase 84.0 3.9 0.00013 45.1 10.5 105 178-304 5-134 (341)
393 1pjc_A Protein (L-alanine dehy 83.9 1.3 4.5E-05 50.6 6.7 35 176-211 165-199 (361)
394 2q1w_A Putative nucleotide sug 83.9 1.8 6.2E-05 48.1 7.7 108 571-712 17-142 (333)
395 1jay_A Coenzyme F420H2:NADP+ o 83.8 2.4 8.2E-05 43.9 8.2 30 180-210 2-32 (212)
396 2ahr_A Putative pyrroline carb 83.8 2.4 8.3E-05 45.5 8.5 86 576-705 4-89 (259)
397 4dyv_A Short-chain dehydrogena 83.8 1.3 4.5E-05 48.2 6.4 37 571-613 24-61 (272)
398 2jl1_A Triphenylmethane reduct 83.8 0.73 2.5E-05 49.8 4.3 98 576-709 1-109 (287)
399 2o23_A HADH2 protein; HSD17B10 83.8 1.5 5.2E-05 46.8 6.8 35 573-613 10-45 (265)
400 3dtt_A NADP oxidoreductase; st 83.7 0.66 2.3E-05 49.9 3.9 38 570-613 14-51 (245)
401 4dry_A 3-oxoacyl-[acyl-carrier 83.7 1.5 5E-05 48.1 6.7 37 571-613 29-66 (281)
402 2iz1_A 6-phosphogluconate dehy 83.6 2.7 9.2E-05 49.9 9.4 32 178-210 5-36 (474)
403 2a9f_A Putative malic enzyme ( 83.6 0.58 2E-05 54.1 3.5 39 572-615 185-223 (398)
404 3hg7_A D-isomer specific 2-hyd 83.6 1.9 6.6E-05 48.6 7.8 44 168-212 130-173 (324)
405 4dll_A 2-hydroxy-3-oxopropiona 83.6 0.91 3.1E-05 50.9 5.1 38 174-212 27-64 (320)
406 3eag_A UDP-N-acetylmuramate:L- 83.6 4.3 0.00015 45.5 10.7 88 179-296 5-95 (326)
407 4dqx_A Probable oxidoreductase 83.5 1.8 6.3E-05 47.2 7.4 36 572-613 24-60 (277)
408 2nwq_A Probable short-chain de 83.5 1.8 6.1E-05 47.2 7.3 36 571-613 18-54 (272)
409 3b1f_A Putative prephenate deh 83.5 3.7 0.00013 44.7 9.9 34 177-210 5-39 (290)
410 2pd6_A Estradiol 17-beta-dehyd 83.4 0.83 2.8E-05 48.9 4.5 35 573-613 5-40 (264)
411 1omo_A Alanine dehydrogenase; 83.4 2.3 8E-05 47.7 8.4 73 177-274 124-197 (322)
412 4eso_A Putative oxidoreductase 83.4 1.4 4.7E-05 47.4 6.3 36 572-613 5-41 (255)
413 3pef_A 6-phosphogluconate dehy 83.4 1.8 6E-05 47.5 7.2 33 179-212 2-34 (287)
414 1sby_A Alcohol dehydrogenase; 83.4 3.4 0.00012 44.0 9.4 35 176-210 3-38 (254)
415 4dmm_A 3-oxoacyl-[acyl-carrier 83.4 1.8 6E-05 47.0 7.2 35 572-612 25-60 (269)
416 1npy_A Hypothetical shikimate 83.3 0.85 2.9E-05 50.2 4.6 34 574-612 118-151 (271)
417 3l6e_A Oxidoreductase, short-c 83.3 2.1 7.3E-05 45.4 7.7 34 574-613 2-36 (235)
418 1ur5_A Malate dehydrogenase; o 83.3 2.8 9.7E-05 46.8 9.0 33 576-613 3-35 (309)
419 1xq1_A Putative tropinone redu 83.3 1.7 5.8E-05 46.6 7.0 35 573-613 12-47 (266)
420 3e48_A Putative nucleoside-dip 83.3 1.8 6.3E-05 46.8 7.3 95 577-707 2-106 (289)
421 3cxt_A Dehydrogenase with diff 83.3 1.4 4.7E-05 48.6 6.4 36 572-613 31-67 (291)
422 3rd5_A Mypaa.01249.C; ssgcid, 83.2 1.1 3.8E-05 49.0 5.6 37 572-614 13-50 (291)
423 4gx0_A TRKA domain protein; me 83.2 1.5 5E-05 53.0 7.1 87 576-701 349-435 (565)
424 2pnf_A 3-oxoacyl-[acyl-carrier 83.2 1.5 5.2E-05 46.2 6.4 35 573-613 5-40 (248)
425 1ja9_A 4HNR, 1,3,6,8-tetrahydr 83.2 1.2 4.1E-05 47.8 5.8 34 573-612 19-53 (274)
426 2zqz_A L-LDH, L-lactate dehydr 83.2 3 0.0001 47.1 9.1 74 575-683 9-85 (326)
427 2gas_A Isoflavone reductase; N 83.2 3.8 0.00013 44.6 9.8 98 575-699 2-103 (307)
428 3grk_A Enoyl-(acyl-carrier-pro 83.2 2.5 8.4E-05 46.6 8.3 36 572-613 28-66 (293)
429 1iy8_A Levodione reductase; ox 83.2 4.1 0.00014 43.8 10.0 63 175-257 10-73 (267)
430 3hn2_A 2-dehydropantoate 2-red 83.2 0.79 2.7E-05 51.1 4.4 32 576-613 3-34 (312)
431 2hk9_A Shikimate dehydrogenase 83.1 0.74 2.5E-05 50.5 4.0 36 572-613 126-161 (275)
432 2rcy_A Pyrroline carboxylate r 83.1 2.2 7.6E-05 45.7 7.8 37 575-613 4-40 (262)
433 3svt_A Short-chain type dehydr 83.1 3.9 0.00013 44.4 9.9 35 175-210 8-43 (281)
434 3gt0_A Pyrroline-5-carboxylate 83.1 1.3 4.3E-05 47.6 5.8 32 179-210 3-37 (247)
435 3is3_A 17BETA-hydroxysteroid d 83.0 1.5 5.2E-05 47.5 6.5 35 572-612 15-50 (270)
436 3nv9_A Malic enzyme; rossmann 83.0 0.39 1.3E-05 56.2 1.8 82 517-613 153-254 (487)
437 2uvd_A 3-oxoacyl-(acyl-carrier 83.0 1.6 5.5E-05 46.4 6.6 34 573-612 2-36 (246)
438 2hrz_A AGR_C_4963P, nucleoside 82.9 1.9 6.7E-05 47.8 7.5 41 573-613 12-54 (342)
439 1ae1_A Tropinone reductase-I; 82.9 2.3 7.8E-05 46.1 7.8 35 573-613 19-54 (273)
440 1xkq_A Short-chain reductase f 82.8 1.6 5.4E-05 47.5 6.6 35 573-613 4-39 (280)
441 4iiu_A 3-oxoacyl-[acyl-carrier 82.8 1.9 6.5E-05 46.5 7.1 30 570-599 21-51 (267)
442 2b4q_A Rhamnolipids biosynthes 82.8 1.6 5.4E-05 47.7 6.5 35 573-613 27-62 (276)
443 1vl8_A Gluconate 5-dehydrogena 82.8 2.2 7.5E-05 46.2 7.6 36 572-613 18-54 (267)
444 2ydy_A Methionine adenosyltran 82.7 1.1 3.7E-05 49.2 5.3 95 574-712 1-115 (315)
445 2xxj_A L-LDH, L-lactate dehydr 82.7 2.5 8.5E-05 47.3 8.2 72 576-682 1-75 (310)
446 3k96_A Glycerol-3-phosphate de 82.7 3.2 0.00011 47.4 9.2 33 178-211 29-61 (356)
447 3st7_A Capsular polysaccharide 82.7 1.2 4E-05 50.4 5.6 33 576-613 1-34 (369)
448 1txg_A Glycerol-3-phosphate de 82.7 3.8 0.00013 45.5 9.8 30 180-210 2-31 (335)
449 4f3y_A DHPR, dihydrodipicolina 82.7 2 6.7E-05 47.4 7.2 99 575-710 7-107 (272)
450 2x9g_A PTR1, pteridine reducta 82.7 1.9 6.5E-05 47.1 7.2 36 572-613 20-56 (288)
451 3rkr_A Short chain oxidoreduct 82.7 2.7 9.3E-05 45.2 8.3 37 173-210 24-61 (262)
452 1nyt_A Shikimate 5-dehydrogena 82.7 0.72 2.5E-05 50.5 3.7 35 573-613 117-151 (271)
453 1gpj_A Glutamyl-tRNA reductase 82.7 0.68 2.3E-05 53.8 3.7 36 573-613 165-200 (404)
454 3k6j_A Protein F01G10.3, confi 82.6 6.9 0.00023 46.3 12.2 33 179-212 55-87 (460)
455 3gvx_A Glycerate dehydrogenase 82.6 0.54 1.9E-05 52.3 2.7 44 168-212 112-155 (290)
456 4aj2_A L-lactate dehydrogenase 82.5 2.1 7.1E-05 48.5 7.5 38 571-612 15-52 (331)
457 2eez_A Alanine dehydrogenase; 82.5 1.4 4.7E-05 50.5 6.1 35 175-210 163-197 (369)
458 3op4_A 3-oxoacyl-[acyl-carrier 82.5 1.8 6.1E-05 46.3 6.7 35 573-613 7-42 (248)
459 2aef_A Calcium-gated potassium 82.5 1.7 5.7E-05 46.1 6.4 89 575-700 9-97 (234)
460 1orr_A CDP-tyvelose-2-epimeras 82.4 1.9 6.6E-05 47.7 7.2 31 576-612 2-33 (347)
461 1z82_A Glycerol-3-phosphate de 82.4 2.3 7.7E-05 47.8 7.8 89 180-298 16-111 (335)
462 3k5p_A D-3-phosphoglycerate de 82.4 2.3 7.7E-05 49.7 7.9 36 572-613 153-188 (416)
463 3hhp_A Malate dehydrogenase; M 82.4 3.5 0.00012 46.2 9.3 74 180-273 2-78 (312)
464 1nff_A Putative oxidoreductase 82.3 1.9 6.6E-05 46.4 6.9 35 573-613 5-40 (260)
465 3l6d_A Putative oxidoreductase 82.3 0.99 3.4E-05 50.2 4.7 34 178-212 9-42 (306)
466 3ak4_A NADH-dependent quinucli 82.3 1.1 3.9E-05 48.1 5.1 35 573-613 10-45 (263)
467 2iz1_A 6-phosphogluconate dehy 82.3 3.6 0.00012 48.7 9.8 33 575-613 5-37 (474)
468 3pp8_A Glyoxylate/hydroxypyruv 82.2 2.3 7.9E-05 47.8 7.7 44 168-212 129-172 (315)
469 3a28_C L-2.3-butanediol dehydr 82.2 2.7 9.1E-05 45.0 8.0 33 575-613 2-35 (258)
470 2i6t_A Ubiquitin-conjugating e 82.2 4.9 0.00017 44.8 10.3 33 179-211 15-48 (303)
471 3qiv_A Short-chain dehydrogena 82.2 4.5 0.00015 42.9 9.7 35 175-210 6-41 (253)
472 3un1_A Probable oxidoreductase 82.2 1.8 6.3E-05 46.7 6.7 80 571-658 24-105 (260)
473 3kb6_A D-lactate dehydrogenase 82.1 0.95 3.3E-05 51.3 4.5 35 572-612 138-172 (334)
474 1zk4_A R-specific alcohol dehy 82.1 1.6 5.5E-05 46.2 6.1 36 572-613 3-39 (251)
475 3sc6_A DTDP-4-dehydrorhamnose 82.0 3.8 0.00013 44.2 9.2 104 180-304 7-111 (287)
476 3gg2_A Sugar dehydrogenase, UD 82.0 4.3 0.00015 47.9 10.2 34 179-213 3-36 (450)
477 1nyt_A Shikimate 5-dehydrogena 82.0 1.2 4E-05 48.8 5.1 34 176-210 117-150 (271)
478 3i83_A 2-dehydropantoate 2-red 81.9 0.82 2.8E-05 51.1 3.9 33 576-614 3-35 (320)
479 1pj3_A NAD-dependent malic enz 81.8 0.28 9.5E-06 58.8 -0.1 80 571-652 280-370 (564)
480 2c07_A 3-oxoacyl-(acyl-carrier 81.7 2.1 7.3E-05 46.6 7.1 34 573-612 42-76 (285)
481 2hq1_A Glucose/ribitol dehydro 81.7 2.3 7.9E-05 44.8 7.2 33 573-611 3-36 (247)
482 2dvm_A Malic enzyme, 439AA lon 81.7 0.95 3.3E-05 53.2 4.4 35 175-209 183-219 (439)
483 3rft_A Uronate dehydrogenase; 81.7 2.5 8.7E-05 45.5 7.6 35 177-212 2-37 (267)
484 3i1j_A Oxidoreductase, short c 81.7 4.3 0.00015 42.9 9.3 35 175-210 11-46 (247)
485 3qlj_A Short chain dehydrogena 81.7 3 0.0001 46.4 8.4 67 170-246 19-86 (322)
486 3cky_A 2-hydroxymethyl glutara 81.7 2 6.7E-05 47.2 6.8 93 177-299 3-99 (301)
487 3qha_A Putative oxidoreductase 81.6 1 3.5E-05 49.8 4.5 34 178-212 15-48 (296)
488 3ehe_A UDP-glucose 4-epimerase 81.5 4.6 0.00016 44.2 9.7 29 179-209 2-31 (313)
489 3ghy_A Ketopantoate reductase 81.5 0.76 2.6E-05 51.8 3.4 32 575-612 3-34 (335)
490 3ado_A Lambda-crystallin; L-gu 81.4 5.8 0.0002 44.6 10.6 109 179-302 7-126 (319)
491 1f0y_A HCDH, L-3-hydroxyacyl-C 81.4 0.88 3E-05 50.4 3.9 33 576-614 16-48 (302)
492 3s55_A Putative short-chain de 81.4 5.9 0.0002 42.9 10.5 93 169-271 1-106 (281)
493 1vkn_A N-acetyl-gamma-glutamyl 81.4 2.4 8.1E-05 48.4 7.4 93 576-706 14-107 (351)
494 2ejw_A HDH, homoserine dehydro 81.3 2.5 8.6E-05 47.8 7.6 85 575-704 3-96 (332)
495 1geg_A Acetoin reductase; SDR 81.3 2.8 9.7E-05 44.8 7.8 33 575-613 2-35 (256)
496 3d4o_A Dipicolinate synthase s 81.3 0.86 3E-05 50.4 3.7 35 573-613 153-187 (293)
497 3ond_A Adenosylhomocysteinase; 81.2 0.82 2.8E-05 54.4 3.7 36 573-614 263-298 (488)
498 3ldh_A Lactate dehydrogenase; 81.2 3.5 0.00012 46.6 8.7 34 575-612 21-54 (330)
499 3nep_X Malate dehydrogenase; h 81.2 2.9 0.0001 46.9 8.0 34 576-613 1-34 (314)
500 2hun_A 336AA long hypothetical 81.1 2.2 7.4E-05 47.2 7.0 110 573-712 1-132 (336)
No 1
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.6e-215 Score=2018.83 Aligned_cols=998 Identities=45% Similarity=0.815 Sum_probs=938.9
Q ss_pred CchhHhhhhhhhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchH
Q 001074 154 TDIDEDLHSRQLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNR 233 (1163)
Q Consensus 154 ~~~d~~rYdRQi~l~G~e~q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~K 233 (1163)
++++++|||||+++||.++|++|++++|+|+|+||+|+|+||||+++|||+|||+|+|.|+++||+||||++++|||++|
T Consensus 3 ~~id~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~K 82 (1015)
T 3cmm_A 3 GEIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKR 82 (1015)
T ss_dssp CCCCHHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBH
T ss_pred hhhhhHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeecCCChhhcCCCcEEEEecC-ChhHHHHHHHHHHhcCCCceeEEeeecceeEEEEEEcCC
Q 001074 234 ALASVQKLQELNNAVVLSTLTSKLTKEQLSDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVFCDFGP 312 (1163)
Q Consensus 234 aea~~~~L~eLNp~V~V~~~~~~l~~e~l~~fdvVI~~~~-~~~~~~~ln~~cr~~~~~IpfI~~~~~G~~G~vf~d~g~ 312 (1163)
|++++++|+++||+|+|+++...++++++.+||+||+|.+ +.+.+..||++|++++ +|||++++.|++|++|+|+|+
T Consensus 83 a~a~~~~L~~lNP~v~v~~~~~~l~~~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~--iplI~~~~~G~~G~v~~d~~~ 160 (1015)
T 3cmm_A 83 GDVTRAKLAELNAYVPVNVLDSLDDVTQLSQFQVVVATDTVSLEDKVKINEFCHSSG--IRFISSETRGLFGNTFVDLGD 160 (1015)
T ss_dssp HHHHHHHHTTSCTTSCEEECCCCCCSTTGGGCSEEEECTTSCHHHHHHHHHHHHHHT--CEEEEEEEETTEEEEEEECCS
T ss_pred HHHHHHHHHHHCCCCeEEEecCCCCHHHHhcCCEEEEcCCCCHHHHHHHHHHHHHcC--CCEEEEEecccEEEEEecCCC
Confidence 9999999999999999999999999999999999999999 9999999999999999 999999999999999999999
Q ss_pred ceEEEcCCCCCCcceeecccccCCCceeecccccccccccCCeeEEEeeccccccCCCCCccccccCcceeeeccccccc
Q 001074 313 EFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKIKSARPYSFTLEEDTTNY 392 (1163)
Q Consensus 313 ~f~v~d~~ge~p~~~~I~~I~~~~~~lv~~~d~~rh~~~dgd~V~f~ev~gm~eln~~~~~~i~~~~~~~f~i~~Dt~~f 392 (1163)
+|.|.+.+|+.|.+.+|.+| +.|++++++++.+|++++||+|.|++++||+++|+++++++++.+||+|.| +|++.|
T Consensus 161 ~~~c~~~~~~~p~~~~i~~i--~~p~~v~~l~~~~h~~~~gd~v~F~ev~gm~elN~~e~~~i~~~~p~~f~I-~Dts~~ 237 (1015)
T 3cmm_A 161 EFTVLDPTGEEPRTGMVSDI--EPDGTVTMLDDNRHGLEDGNFVRFSEVEGLDKLNDGTLFKVEVLGPFAFRI-GSVKEY 237 (1015)
T ss_dssp CEEESBSSCCCCCEEEEEEE--CTTCEEEESTTCCCCCCTTCEEEEECCBTSGGGGSSCCEECEEEETTEEEC-SCCTTT
T ss_pred ceEEeeCCCCCCccccccCC--CCCceeEeeecccccCCCCCeEEEEeeccchhhcCccceeeEEcCCceeEe-cccchh
Confidence 99999999999999999999 567899999999999999999999999999999999999999999999999 699999
Q ss_pred cceeecceEEEeecCeeecccchHhhhcCCCCcccccCccCCCCChHHHHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHH
Q 001074 393 GTYVKGGIVTQVKQPKVLNFKPLREALEDPGDFLLSDFSKFDRPPPLHLAFQALDKFVSEL-GRFPVAGSEEDAQKLISV 471 (1163)
Q Consensus 393 ~~y~~gg~~~qvk~p~~i~fksL~e~L~~p~~~l~~d~~k~~~~~~l~~~~~aL~~F~~~~-gr~P~~~~~~Da~~l~~i 471 (1163)
+.|++||+++|+|+|++++|++|++.+++| .++.+|+.|++++..+|++||||++|.++| ||+|++++++|+++|.++
T Consensus 238 ~~yv~~g~~~qvk~p~~i~f~~l~~~l~~p-~~l~~d~~k~~~~~~l~~~~~Al~~F~~~~~gr~P~~~~~~D~~~l~~~ 316 (1015)
T 3cmm_A 238 GEYKKGGIFTEVKVPRKISFKSLKQQLSNP-EFVFSDFAKFDRAAQLHLGFQALHQFAVRHNGELPRTMNDEDANELIKL 316 (1015)
T ss_dssp CCCCBCCEEEECCCCEEECCCCHHHHHHSC-CBCCSCGGGTHHHHHHHHHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHH
T ss_pred hhhhcCceeEEecCCcccCHHHHHHHHcCh-HHHHHHHhccCcchHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999 477889998889999999999999999999 999999999999999999
Q ss_pred HHHHHHhcCCC--CCCCCCHHHHHHHHhhcccccCchhhHhhhhhhHHHHHhhcCCcccceeeeeeeccCCCCC---CCC
Q 001074 472 ATNINESLGDG--RVEDINTKLLRHFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESLPT---EPL 546 (1163)
Q Consensus 472 a~~i~~~~~~~--~~~~i~~~li~~~~~~~~~el~PvaA~iGGiaAQEVIKaiTgkf~PI~q~~~fD~ie~Lp~---~~~ 546 (1163)
+++++.+.+.. ...+++++++++|+++++++|||||||+||+|||||||+|||||+||+||||||+++++|. .++
T Consensus 317 a~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~el~pvaA~iGGivAQEVIKaiT~kf~Pi~~~~~~d~~~~~~~~~~~~~ 396 (1015)
T 3cmm_A 317 VTDLSVQQPEVLGEGVDVNEDLIKELSYQARGDIPGVVAFFGGLVAQEVLKACSGKFTPLKQFMYFDSLESLPDPKNFPR 396 (1015)
T ss_dssp HHHHHHHCHHHHCTTCCCCHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHCBSCCCCSEEEEECGGGSCCTTTSCC
T ss_pred HHHHHHhcCCCccccccCcHHHHHHHHHhcCcccCcHHHHhcchHHHHHHHHhccCCCcccceEEecchhhccccccCCC
Confidence 99998764311 0036889999999999999999999999999999999999999999999999999999994 567
Q ss_pred CCCCCCCccCchhhhhhhcCHHHHHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCc
Q 001074 547 DSTEFKPINSRYDAQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLF 626 (1163)
Q Consensus 547 ~~~~~~~~~~Rydrq~~l~G~~~q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf 626 (1163)
++++++|.++||+||+++||.++|++|++++|+||||||+||++|++||++||+||++|+|+|+|+|+|+.|||||||||
T Consensus 397 ~~~~~~~~~~Ry~rq~~l~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf 476 (1015)
T 3cmm_A 397 NEKTTQPVNSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLF 476 (1015)
T ss_dssp STTTTSCCSSTTHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTC
T ss_pred ChhhccchhhhhhhHHHhcCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccC
Confidence 78888898999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccchHHHHHHHHHHhhCCCC--eEEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEe
Q 001074 627 RDWNIGQAKSTVAASAATSINPRL--NIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLE 704 (1163)
Q Consensus 627 ~~~dIG~~Ka~vaa~~l~~~np~~--~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~ 704 (1163)
+.+|||++||++|+++++++||++ +|+++..+++++++.+|+++||+++|+||+|+||+++|++++++|+.+++|+|+
T Consensus 477 ~~~dvG~~Ka~~aa~~l~~iNP~v~~~v~~~~~~i~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~ 556 (1015)
T 3cmm_A 477 RPKDVGKNKSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLE 556 (1015)
T ss_dssp CGGGTTSBHHHHHHHHHHHHCGGGTTTEEEECCCCSGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred ChhhCCCHHHHHHHHHHHHHCCCCcceEEEEecccCchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEE
Confidence 999999999999999999999999 999999999998888888999999999999999999999999999999999999
Q ss_pred cCCCCcccceEEEeCCcccccCCCCCCCCCCCCCccccCCCCChhhHHHHHHHHhhhhccCChhhhhhccCCchhhhhhh
Q 001074 705 SGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPVEYTTSM 784 (1163)
Q Consensus 705 sgt~G~~G~v~viip~~t~~y~~~~dp~~~~~p~Ct~~~fP~~~~Hci~wAr~~F~~lF~~~~~~~n~~l~~~~~~~~~~ 784 (1163)
+|+.|++|++++++|+.|+||.|..+|+++.+|+||+++||+.++|||+|||++|+++|++.++++|+|++|| .|++.+
T Consensus 557 ~g~~G~~G~v~v~~p~~t~cy~c~~dp~~~~~P~Ctl~~~P~~~~h~i~wa~~~f~~lf~~~~~~~~~~l~~~-~~~~~~ 635 (1015)
T 3cmm_A 557 SGTLGTKGNTQVIIPRLTESYSSSRDPPEKSIPLCTLRSFPNKIDHTIAWAKSLFQGYFTDSAENVNMYLTQP-NFVEQT 635 (1015)
T ss_dssp EEEETTEEEEEEECTTTBCCGGGSCCCCCCCCCHHHHHTCCCSHHHHHHHHHHHHHHHHTHHHHHHHHHHHCT-THHHHH
T ss_pred eCCCccccceEEEeCCCCCccCCCCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHHHHhhhhhhhhhhccCc-hhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 677777
Q ss_pred hhcCchhHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCccCCCCCCCccccCC
Q 001074 785 ANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSS 864 (1163)
Q Consensus 785 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~dci~~a~~~f~~~F~~~I~~Ll~~~p~d~~t~~g~~fWs~~kr~P~pl~fd~ 864 (1163)
.+.+..+. +.|+.+++.| ..+|.+|+||++||+.+|+++|+++|+|||++||+|++|++|+|||+||||+|+||+||+
T Consensus 636 ~~~~~~~~-~~l~~~~~~l-~~~~~~~~~c~~~a~~~f~~~F~~~I~~Ll~~~p~d~~~~~g~~fW~~~kr~P~pl~fd~ 713 (1015)
T 3cmm_A 636 LKQSGDVK-GVLESISDSL-SSKPHNFEDCIKWARLEFEKKFNHDIKQLLFNFPKDAKTSNGEPFWSGAKRAPTPLEFDI 713 (1015)
T ss_dssp HC---CCH-HHHHHHHHHH-HSCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHSCTTCBCSTTCBSSCTTCCCCCCCCCCT
T ss_pred HhccchhH-HHHHHHHHHh-hcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCcccccCCCCCCCCcccCC
Confidence 66544343 7789998888 788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHcCCCCC--CCCCChHHHHHHhhhcCCCCcCCCCCcceecccccccccccCcCcHHHHHHHH
Q 001074 865 ADPSHLHFVMAASILRAETFGIPIP--DWTNNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLI 942 (1163)
Q Consensus 865 ~~~~h~~fi~~~a~l~a~~~~i~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~i~~~e~~~~~~~~~~~~~~~~~~l~ 942 (1163)
+|++|++||+++|+|+|++|||+.+ .|..+.+.+.++++++.+|+|.|+++++|.+++++...++...++.+.++.|.
T Consensus 714 ~~~~h~~fi~~~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~l~ 793 (1015)
T 3cmm_A 714 YNNDHFHFVVAGASLRAYNYGIKSDDSNSKPNVDEYKSVIDHMIIPEFTPNANLKIQVNDDDPDPNANAANGSDEIDQLV 793 (1015)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCCSSTTSSCCHHHHHHHHTTCCCCCCCCCSSCCCCSSTTSSCC---------CCHHHH
T ss_pred CCHHHHHHHHHHHHhHHHhcCCCCccccccCCHHHHHHHHhhCcCCCcCCccCceeccchhhhcccccccccHHHHHHHH
Confidence 9999999999999999999999985 47788999999999999999999999999988876544332332445566777
Q ss_pred HHHHHhhhcCCCCCCcCCceeeccCCCCchhHHHHHHhhhhhhccCCCCccHHHHHHHhCcccchhhhhHHHHHHHHHHH
Q 001074 943 IKLEQCRKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLE 1022 (1163)
Q Consensus 943 ~~l~~~~~~~~~~~~~~p~~FeKDDd~n~hidFi~aasNlRa~ny~I~~~~~~~~k~iAG~IIPAIaTTtA~vaGl~~lE 1022 (1163)
++|++... ..++++.|++||||||+|+|||||+|||||||+||+||++|||++|+|||||||||||||||||||+|+|
T Consensus 794 ~~l~~~~~--~~~~~~~~~~FeKDDd~n~h~dFi~aasNlRa~ny~I~~~~~~~~k~iaG~IIPAIaTT~AivaGl~~lE 871 (1015)
T 3cmm_A 794 SSLPDPST--LAGFKLEPVDFEKDDDTNHHIEFITACSNCRAQNYFIETADRQKTKFIAGRIIPAIATTTSLVTGLVNLE 871 (1015)
T ss_dssp TTSCCGGG--GTTCCCCCCCCCTTCTTSSHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHH
T ss_pred HHhccchh--cccCCCCceeeecCCCchhHHHHHHHHHHHHHHHcCCCccCHHHHHHHhCCcCccchhHHHHHHHHHHHH
Confidence 66655433 2467899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcccccccccccccCcccccCCCCCcccccCCcce-eEEeEEEcCCCCcHHHHHHHHHHc-CCceeeeecC
Q 001074 1023 LYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVIKHRDMSW-TVWDRWILKDNPTLRELIQWLKDK-GLNAYSISCG 1100 (1163)
Q Consensus 1023 l~K~l~~~~~~~~~rn~f~nla~p~~~~~eP~~~~~~~~~~~~~-t~Wd~~~v~~~~TL~eli~~~~~k-~l~~~~I~~g 1100 (1163)
+||++++.+++++|||+|+|||+|+|.|+||.+|++.++...+| |+||||++.+++||+||+++|+++ |++++||++|
T Consensus 872 ~~K~~~~~~~~~~~kn~f~nla~~~~~~~~p~~~~~~~~~~~~~~t~wd~~~v~~~~Tl~~li~~~~~~~~~~~~~i~~~ 951 (1015)
T 3cmm_A 872 LYKLIDNKTDIEQYKNGFVNLALPFFGFSEPIASPKGEYNNKKYDKIWDRFDIKGDIKLSDLIEHFEKDEGLEITMLSYG 951 (1015)
T ss_dssp HHHHHTTCCCGGGCCEEEEETTTTEEEEECCCBCCEEEETTEEEETTTCEEEEESCCBHHHHHHHHHHTTCCEEEEEEET
T ss_pred HHHHHhcccchhhhhhHHHhccCCceeecCCCCCCCCCCCCCCCCeEEEEEEECCCCcHHHHHHHHHHHhCCcceeeccC
Confidence 99999987889999999999999999999999999988888899 999999998899999999999999 9999999999
Q ss_pred CceeecCCCc--chhhcccCcHHHHHHHhhccCCCCceeEEEEEEEeecCCCCccccCeEEEEe
Q 001074 1101 SCLLFNSMFP--RHKERMDKKVVDLAREVAKVELPPYRRHLDVVVACEDDEDNDIDIPLISIYF 1162 (1163)
Q Consensus 1101 ~~llY~~~~~--~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~P~v~~~~ 1162 (1163)
+++||++++| ++++||+++|+||++.++++++|++++||+|+|+|+|++++||++|+|||+|
T Consensus 952 ~~~ly~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~d~~~p~v~~~~ 1015 (1015)
T 3cmm_A 952 VSLLYASFFPPKKLKERLNLPITQLVKLVTKKDIPAHVSTMILEICADDKEGEDVEVPFITIHL 1015 (1015)
T ss_dssp TEEEEETTCCHHHHHHHTTSBHHHHHHHHSSSCCCSSCCEEEEEEEEECTTSCEECCCEEEEEC
T ss_pred CcEEEecCCCchhhHHhccCCHHHHHHhhccCcCCCCceEEEEEEEecCCCCCcCCCCcEEEeC
Confidence 9999999987 6789999999999999999999999999999999999999999999999986
No 2
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=100.00 E-value=6.9e-101 Score=930.53 Aligned_cols=517 Identities=25% Similarity=0.394 Sum_probs=418.9
Q ss_pred hhhhhcCHHHHHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHH
Q 001074 560 AQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVA 639 (1163)
Q Consensus 560 rq~~l~G~~~q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~va 639 (1163)
.|+++||.++|++|++++|+||||||+||+++++||++|| |+|+|+|+|+|+.|||||||||+.+|||++||++|
T Consensus 2 ~qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGV-----G~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaa 76 (640)
T 1y8q_B 2 ALSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGF-----SHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVA 76 (640)
T ss_dssp ----CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHH
T ss_pred chhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCC-----CeEEEecCCEEChhhcCCCcCCChhHcChHHHHHH
Confidence 3889999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCeEEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecCCCCcccceEEEeC
Q 001074 640 ASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIP 719 (1163)
Q Consensus 640 a~~l~~~np~~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sgt~G~~G~v~viip 719 (1163)
+++++++||+++|+++..++.++ .++.+|++++|+||+|+||+++|+++++.|+.+++|+|++|+.|+.|++++++|
T Consensus 77 a~~L~~iNP~v~V~a~~~~i~~~---~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G~v~vi~p 153 (640)
T 1y8q_B 77 KESVLQFYPKANIVAYHDSIMNP---DYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKK 153 (640)
T ss_dssp HHHHHTTCTTCEEEEEESCTTST---TSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECT
T ss_pred HHHHHHHCCCCeEEEEecccchh---hhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecccceEEEECC
Confidence 99999999999999999988653 245689999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCCCCccccCCCCChhhHHHHHHHHhhhhccCCh--hhhhhccCCchh-hhhhhhhcCchhHHHHH
Q 001074 720 HLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTP--AEVNAYLSNPVE-YTTSMANAGDAQARDNL 796 (1163)
Q Consensus 720 ~~t~~y~~~~dp~~~~~p~Ct~~~fP~~~~Hci~wAr~~F~~lF~~~~--~~~n~~l~~~~~-~~~~~~~~~~~~~~~~l 796 (1163)
+.|+||.|..+|+++.+|+||++++|+.++|||+||+++|+++|+..+ ++++.++++|.. +... ......+..+.+
T Consensus 154 ~~t~Cy~C~~~p~~~~~p~Cti~~~p~~~~hci~~a~~~f~~lf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 232 (640)
T 1y8q_B 154 GVTECYECHPKPTQRTFPGATIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPEAAWEPT-EAEARARASNED 232 (640)
T ss_dssp TTSCCTTSSCCCCCCCCCTTTTTSCCCSHHHHHHHHHHHHHHHHSCCCGGGCCSCCTTCTTSCCC---------------
T ss_pred CCCCCcccCCCCCCcccceeeecCCCCchHHHHHHHHHHHHHHhCCcchhhhhcccccchhhhhhhh-hhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999876 344455666643 1111 111112223344
Q ss_pred HHHHHHhhhhcccchHHHHHHHHH-HHHHHHHHHHHHHhhcCCccccccCCCCCccCCCCCCCccccCCCCCcchhHHHH
Q 001074 797 ERVLECLDKEKCEIFQDCITWARL-KFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMA 875 (1163)
Q Consensus 797 ~~~~~~l~~~~~~~~~dci~~a~~-~f~~~F~~~I~~Ll~~~p~d~~t~~g~~fWs~~kr~P~pl~fd~~~~~h~~fi~~ 875 (1163)
+.+... .+.+|.+|+.||+. +|+++|+++|+|||++ ++||++ ||+|+||+||..++.|....
T Consensus 233 ~~~~~~----~~~~~~~~~~~a~~~~f~k~F~~~I~~Ll~~----------~~fW~~-kr~P~pl~fd~~~~~~~~~~-- 295 (640)
T 1y8q_B 233 GDIKRI----STKEWAKSTGYDPVKLFTKLFKDDIRYLLTM----------DKLWRK-RKPPVPLDWAEVQSQGEETN-- 295 (640)
T ss_dssp -----------CHHHHHHTTSCHHHHHHHHHTHHHHHHTTC----------GGGCSS-SCCCCCCCHHHHHHC-------
T ss_pred hHHHHH----hhhhHHHhHhHHHHHHHHHHHhhHHHHHHhC----------cccccC-CCCCCCcccCcccccccccc--
Confidence 444333 24589999999984 9999999999999984 899999 99999999998888776321
Q ss_pred HHHHHHHHcCCCCCCCCCChHHHHHHhhhcCCCCcC-CCCCcceecccccccccccCcCcHHHHHHHHHHHHHhhhcCCC
Q 001074 876 ASILRAETFGIPIPDWTNNPKMLAEAVDKVMVPDFL-PKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPS 954 (1163)
Q Consensus 876 ~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~f~-~~~~~~i~~~e~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 954 (1163)
+ + |+|. |+.+. .+++.++.........+.++.|.++|+..
T Consensus 296 -~--------~---------------------~~~~~~~~~~---~d~~~~~~~~~~~~~~~~~~~l~~~l~~~------ 336 (640)
T 1y8q_B 296 -A--------S---------------------DQQNEPQLGL---KDQQVLDVKSYARLFSKSIETLRVHLAEK------ 336 (640)
T ss_dssp ---------------------------------------CCC---GGGSCCCHHHHHHHHHHHHHHHHHHHHHT------
T ss_pred -c--------c---------------------ccccccccCC---ChhhhcChhhhhhhHHHHHHHHHHHhhhc------
Confidence 0 0 0000 00000 01111111100000123445555555442
Q ss_pred CCCcCCceeeccCCCCchhHHHHHHhhhhhhccCCCCccHHHHHHHhCcccchhhhhHHHHHHHHHHHHHHHhcCCCCcc
Q 001074 955 GFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLE 1034 (1163)
Q Consensus 955 ~~~~~p~~FeKDDd~n~hidFi~aasNlRa~ny~I~~~~~~~~k~iAG~IIPAIaTTtA~vaGl~~lEl~K~l~~~~~~~ 1034 (1163)
.++.|++||||||+ |||||+|||||||+||+||++|||++|+|||||||||||||||||||+|+|+||++++ +++
T Consensus 337 -~~~~~~~FdKDDd~--h~dFV~aaaNlRA~~y~I~~~~~~~~K~iAG~IIPAIATTnAiVaGl~~lE~~Kvl~~--~~~ 411 (640)
T 1y8q_B 337 -GDGAELIWDKDDPS--AMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSG--KID 411 (640)
T ss_dssp -CTTCCCCCCTTCHH--HHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHTT--CGG
T ss_pred -ccCCCcccCCCCHH--HHHHHHHHHHHHHHHcCCCcCCHHHHHHHhCCcccchhhHHHHHHHHHHHHHHHHHhc--cHH
Confidence 14789999999997 9999999999999999999999999999999999999999999999999999999996 578
Q ss_pred cccccccccccC----cccccCCCCCccccc-CCcceeEEeEEEcCCCCcHHHHHHHH-HHc-CCceeeeec---CCcee
Q 001074 1035 DYRNTFANLALP----LFSMAEPVPPKVIKH-RDMSWTVWDRWILKDNPTLRELIQWL-KDK-GLNAYSISC---GSCLL 1104 (1163)
Q Consensus 1035 ~~rn~f~nla~p----~~~~~eP~~~~~~~~-~~~~~t~Wd~~~v~~~~TL~eli~~~-~~k-~l~~~~I~~---g~~ll 1104 (1163)
+|||+|+|+++| +|.+++|.+|++.++ +...|++|+++.+. ++||++|+++| +++ |++++||++ |+++|
T Consensus 412 ~~kn~f~n~a~~~~~~~~~~~~p~~p~~~c~vc~~~~~~~~~~~~~-~~TL~~li~~~~~~~~~l~~~~is~~~~~~~~l 490 (640)
T 1y8q_B 412 QCRTIFLNKQPNPRKKLLVPCALDPPNPNCYVCASKPEVTVRLNVH-KVTVLTLQDKIVKEKFAMVAPDVQIEDGKGTIL 490 (640)
T ss_dssp GCEEEEECSSCCTTSEEEEEEECCCCCTTCTTTSSSCEEEEEECTT-TCBHHHHHHCCCCCCTCCSSCEEEESSSSCCEE
T ss_pred hhhhhheeeccCCCCcEEeecccCCCCCCCcccCCccEEEEEEeCC-CCcHHHHHHHHHHHhhCCCCceEEEEcCCCcEE
Confidence 999999999999 999999998877653 33467899999876 89999999996 777 999999999 89999
Q ss_pred ecCCCcchhhcccCcHHHH-HHHhhccCCCCceeEEEEEEEeec
Q 001074 1105 FNSMFPRHKERMDKKVVDL-AREVAKVELPPYRRHLDVVVACED 1147 (1163)
Q Consensus 1105 Y~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~~~~~~l~~~~~d 1147 (1163)
|+++++++++||+++|+|| ++..++..+++...++.|++.+.-
T Consensus 491 y~~~~~~~~~~l~~~l~el~v~~~~~~~v~d~~~~~~~~i~~~~ 534 (640)
T 1y8q_B 491 ISSEEGETEANNHKKLSEFGIRNGSRLQADDFLQDYTLLINILH 534 (640)
T ss_dssp ECSSSSSSTTGGGSBGGGGTCCTTCEEEEEETTTTEEEEEEEEE
T ss_pred EeccchhhHHhhhCcHHHhCccCCcEEEecCCCccEEEEEEEEe
Confidence 9998888899999999995 777777777777777888888753
No 3
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=100.00 E-value=6.5e-69 Score=593.66 Aligned_cols=268 Identities=41% Similarity=0.745 Sum_probs=238.4
Q ss_pred CCCCCCCCccccCCCCChhhHHHHHHHHhhhhccCChhhhhhccCCchhhhhhhhhcCchhHHHHHHHHHHHhhhhcccc
Q 001074 731 PPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEI 810 (1163)
Q Consensus 731 p~~~~~p~Ct~~~fP~~~~Hci~wAr~~F~~lF~~~~~~~n~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 810 (1163)
.-++++|+||+|+||+.|+|||+|||++|++||++.++++|+|++|| .|++.+.+.++.+..+.|+.+++.|...+|.+
T Consensus 9 ~~~ks~P~CTlrsfP~~i~HcI~WAr~lFe~lF~~~~~~~n~~l~dp-~~~~~~~~~~~~~~~~~l~~i~~~L~~~~p~~ 87 (276)
T 1z7l_A 9 EFEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENVNQYLTDS-KFVERTLRLAGTQPLEVLEAVQRSLVLQRPQT 87 (276)
T ss_dssp -----CCHHHHHTCCCSHHHHHHHHHHHHHHHHTHHHHHHHHHTTCS-HHHHHHHTSSTTHHHHHHHHHHHHHTTTCCSS
T ss_pred cCCCCCceeccCCCCCChhHHHHHHHHHHHHHHcCCHHHHHHhhcCh-HHHHHHHhccchhhHHHHHHHHHHHhhcCCCc
Confidence 44678999999999999999999999999999999999999999999 78888888777777889999999998899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCccCCCCCCCccccCCCCCcchhHHHHHHHHHHHHcCCCCCC
Q 001074 811 FQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPD 890 (1163)
Q Consensus 811 ~~dci~~a~~~f~~~F~~~I~~Ll~~~p~d~~t~~g~~fWs~~kr~P~pl~fd~~~~~h~~fi~~~a~l~a~~~~i~~~~ 890 (1163)
|++|++|||.+|+++|+++|+|||++||+|++|++|+||||||||+|+||+||+.|++|++||++||+|+|++|||+..
T Consensus 88 ~~~c~~~Ar~~F~k~F~~~I~qLL~~fP~D~~t~~G~~fWsg~Kr~P~PL~fd~~~~~h~~fI~aaa~L~A~~~gi~~~- 166 (276)
T 1z7l_A 88 WGDCVTWACHHWHTQYCNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLTGS- 166 (276)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHSCTTCBCTTSCBSSCSSCCCCCCCCCCTTSHHHHHHHHHHHHHHHHHTTCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCcccCCCCCCCCCcccCCCchHHHHHHHHHHHHHHHHcCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCCChHHHHHHhhhcCCCCcCCCCCcceecccccccccccCcCcHHHHHHHHHHHHHhhhcCCCCCCcCCceeeccCCCC
Q 001074 891 WTNNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDDDTN 970 (1163)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~f~~~~~~~i~~~e~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~p~~FeKDDd~n 970 (1163)
.+.+.+.++++++.+|+|+|+++++|.++|++....+.+. +.+.++.|.++|++... ..+.++.|++||||||+|
T Consensus 167 --~d~~~i~~~~~~~~vp~f~p~~~~ki~~~e~~~~~~~~~~-~~~~~~~L~~~l~~~~~--~~~~~~~pl~FeKDDd~N 241 (276)
T 1z7l_A 167 --QDRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSANASV-DDSRLEELKATLPSPDK--LPGFKMYPIDFEKDDDSN 241 (276)
T ss_dssp --CCHHHHHHHHHTCCCCCCCCCSSCCCCSSSCCC------C-CSHHHHHHHHHSCCGGG--STTCCCCCCCCCSSCTTS
T ss_pred --CCHHHHHHHHhcCCCCCcCCccccccccchhhhchhcccc-cHHHHHHHHHHhhhhhh--cccccCCCcceecCCCcc
Confidence 5788899999999999999999999999887765543333 34578888888766544 256789999999999999
Q ss_pred chhHHHHHHhhhhhhccCCCCccHHHHHHHhCccc
Q 001074 971 YHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRII 1005 (1163)
Q Consensus 971 ~hidFi~aasNlRa~ny~I~~~~~~~~k~iAG~II 1005 (1163)
+|||||+|||||||+||+||++||+++|+||||||
T Consensus 242 ~hmdFItAaSNLRA~nY~I~~~dr~~~K~IAG~II 276 (276)
T 1z7l_A 242 FHMDFIVAASNLRAENYDISPADRHKSKLIAGKII 276 (276)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCCCHHHHHHHTTC--
T ss_pred cHHHHHHHHHHHHHHHcCCCcCCHHHHHHHhCCcC
Confidence 99999999999999999999999999999999998
No 4
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=6.7e-64 Score=603.08 Aligned_cols=380 Identities=26% Similarity=0.351 Sum_probs=310.7
Q ss_pred chhH-hhhhhhhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchH
Q 001074 155 DIDE-DLHSRQLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNR 233 (1163)
Q Consensus 155 ~~d~-~rYdRQi~l~G~e~q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~K 233 (1163)
++|+ +||+||+++||.++|++|++++|+|+|+||+|+|+||||+++|||+|||+|+|.|+.+||+||||++++|||++|
T Consensus 8 ~id~~~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~K 87 (531)
T 1tt5_A 8 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 87 (531)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBH
T ss_pred cccHHHHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHH
Confidence 5564 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeecCCC------hhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEeeecceeEEEE
Q 001074 234 ALASVQKLQELNNAVVLSTLTSKLT------KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVF 307 (1163)
Q Consensus 234 aea~~~~L~eLNp~V~V~~~~~~l~------~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~~~~G~~G~vf 307 (1163)
|++++++|+++||+|+|+++...++ ++++.+||+||+|.++.+.+..++++|++++ +|||++++.|++|++|
T Consensus 88 a~~a~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~--iplI~~~~~G~~G~v~ 165 (531)
T 1tt5_A 88 AEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQ--IPLLICRTYGLVGYMR 165 (531)
T ss_dssp HHHHHHHHHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTT--CCEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcC--CCEEEEEecCCeEEEE
Confidence 9999999999999999999987663 3688999999999999999999999999999 9999999999999999
Q ss_pred EEcCCceEEEcCCCCCCcc------------eeecccc---------cCCCcee---ecccccccccccC-------Cee
Q 001074 308 CDFGPEFTVVDVDGEDPHT------------GIIASIS---------NDNPALV---SCVDDERLEFQDG-------DLV 356 (1163)
Q Consensus 308 ~d~g~~f~v~d~~ge~p~~------------~~I~~I~---------~~~~~lv---~~~d~~rh~~~dg-------d~V 356 (1163)
++++ +|++.|.+|+.+.. ..+.++. ...|+++ ++++..+... +| |++
T Consensus 166 ~~~p-~~~~~d~~~~~~~~~lr~~~p~P~~~~~~~~~~~~~~~~~~~~~~p~vv~~~~ale~~k~~~-~g~~P~~~~~~~ 243 (531)
T 1tt5_A 166 IIIK-EHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSET-NGRIPKTYKEKE 243 (531)
T ss_dssp EECS-CEEESCCCCSSCCCCCCSSSCCHHHHHHHHTCC-------CGGGSCHHHHHHHHHHHHTTTT-CCCCCCHHHHHH
T ss_pred EEcC-CceeccCCCCCCCCcccccCCCCCchhhhhccCcccccCCCcCCchHHHHHHHHHHHHHHhc-CCCCCCchhhHH
Confidence 9998 79999988865432 1222221 1234444 4445433221 55 778
Q ss_pred EEEee--ccc----cccCC--------------------------CCCcccccc----------------------Ccce
Q 001074 357 VFSEV--HGM----TELND--------------------------GKPRKIKSA----------------------RPYS 382 (1163)
Q Consensus 357 ~f~ev--~gm----~eln~--------------------------~~~~~i~~~----------------------~~~~ 382 (1163)
.|+++ .|| .+.|. ..+.+++.. -|++
T Consensus 244 ~f~~~i~~~~~~~~~e~N~~Ea~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~~s~~Fwil~~alk~F~~~~~~g~lPl~ 323 (531)
T 1tt5_A 244 DFRDLIRQGILKPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVR 323 (531)
T ss_dssp HHHHHHHHTTSSCTTHHHHHHHHHHHHHHSCCCCCCHHHHHHHTSHHHHSCCSSCCHHHHHHHHHHHHHHTTTTTSCCCC
T ss_pred HHHHHHHhhcccCccccchHHHHHHHHhhcCCccCcHHHHHHhcccccccccCCCchHHHHHHHHHHHHHhcCCCCCCCC
Confidence 89988 788 23321 111222222 3777
Q ss_pred eeeccc-cccccceeec--------------------ceEEEeec-Ceeeccc------------------chHhhhcCC
Q 001074 383 FTLEED-TTNYGTYVKG--------------------GIVTQVKQ-PKVLNFK------------------PLREALEDP 422 (1163)
Q Consensus 383 f~i~~D-t~~f~~y~~g--------------------g~~~qvk~-p~~i~fk------------------sL~e~L~~p 422 (1163)
+++ .| ++....|.+. |++++++. |+.++|+ +|++.+..|
T Consensus 324 g~i-pDm~s~t~~Y~~lq~iy~~ka~~D~~~v~~~v~~~~~~~~~~~~~i~~~~i~~f~kn~~~l~~i~~~~l~~~~~~~ 402 (531)
T 1tt5_A 324 GTI-PDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLD 402 (531)
T ss_dssp CCC-CCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSSSCHHHHHHHHHTGGGCEEECCCCHHHHHSTT
T ss_pred Ccc-CccccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCHHHHHHHHhchhhhhcccccchHhhhccc
Confidence 777 35 5555555443 45556555 5555555 555555444
Q ss_pred C---CcccccCccCCCCChHHHHHHHHHHHHHHhCCCCCCCC---HHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 001074 423 G---DFLLSDFSKFDRPPPLHLAFQALDKFVSELGRFPVAGS---EEDAQKLISVATNINESLGDGRVEDINTKLLRHFA 496 (1163)
Q Consensus 423 ~---~~l~~d~~k~~~~~~l~~~~~aL~~F~~~~gr~P~~~~---~~Da~~l~~ia~~i~~~~~~~~~~~i~~~li~~~~ 496 (1163)
. ..+.+++.+.+++..+|++|||+++|.++|||+|++++ ++|+++|.+++++++.+.+. .+.++++++++++
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~f~~~~gr~P~~~~~~~~~D~~~l~~~~~~~~~~~~~--~~~~~~~~~~e~~ 480 (531)
T 1tt5_A 403 TINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGL--SVMVKDDYVHEFC 480 (531)
T ss_dssp TSCHHHHHHHTTSTTSTHHHHHHHHHHHHHHHHHSSCTTCSTTTHHHHHHHHHHHHHHHHHHHTC--CCCCCHHHHHHHH
T ss_pred cchhhhhhhhhhccccchHHHHHHHHHHHHHHHhCCCCCccccchHHHHHHHHHHHHHHHHhcCC--cccccHHHHHHHH
Confidence 1 12567788889999999999999999999999999887 89999999999999888764 2568899999999
Q ss_pred hhcccccCchhhHhhhhhhHHHHHhhcCCcccceeeeeeeccCCC
Q 001074 497 FGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESL 541 (1163)
Q Consensus 497 ~~~~~el~PvaA~iGGiaAQEVIKaiTgkf~PI~q~~~fD~ie~L 541 (1163)
++++++|||||||+||+|||||||+|||||+||+|||||||+++.
T Consensus 481 r~~~~el~pvaA~~GGi~AQEviK~iT~q~~Pi~n~~~fDg~~~~ 525 (531)
T 1tt5_A 481 RYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQT 525 (531)
T ss_dssp HTTTCCCHHHHHHHHHHHHHHHHHHHHTCSBCCCSCEEEETTTTE
T ss_pred HhcCCCcCHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCCce
Confidence 999999999999999999999999999999999999999999874
No 5
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=1.6e-59 Score=539.59 Aligned_cols=322 Identities=32% Similarity=0.471 Sum_probs=272.0
Q ss_pred CCchhHhhhhhhhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCch
Q 001074 153 QTDIDEDLHSRQLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKN 232 (1163)
Q Consensus 153 ~~~~d~~rYdRQi~l~G~e~q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~ 232 (1163)
.++.+.+|||||+++||.++|++|++++|+|+|+||+|+|+||||+++|||+|||+|+|.|+++||+||||++++|||++
T Consensus 11 l~~~~~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~ 90 (346)
T 1y8q_A 11 ISEEEAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRN 90 (346)
T ss_dssp CCHHHHHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSB
T ss_pred CCHHHHHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCC
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeecCC---ChhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEeeecceeEEEEEE
Q 001074 233 RALASVQKLQELNNAVVLSTLTSKL---TKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVFCD 309 (1163)
Q Consensus 233 Kaea~~~~L~eLNp~V~V~~~~~~l---~~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~~~~G~~G~vf~d 309 (1163)
||++++++|+++||+|+|+++...+ .++++++||+||+|.++.+.+..+|++|++++ +|||++++.|++|++|+|
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~--ip~i~~~~~G~~G~v~~d 168 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQICHKNS--IKFFTGDVFGYHGYTFAN 168 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTT--CEEEEEEEEBTEEEEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcC--CCEEEEeecccEEEEEEe
Confidence 9999999999999999999998876 45789999999999999999999999999999 999999999999999999
Q ss_pred cCCceEEEcCCCCCCcceeecccccCCCceeecccccccccccCCeeEEEeecccccc-CCCCCccccccCcceeeeccc
Q 001074 310 FGPEFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTEL-NDGKPRKIKSARPYSFTLEED 388 (1163)
Q Consensus 310 ~g~~f~v~d~~ge~p~~~~I~~I~~~~~~lv~~~d~~rh~~~dgd~V~f~ev~gm~el-n~~~~~~i~~~~~~~f~i~~D 388 (1163)
+|+++++.+..|+...++ |.+. +++++.++ |
T Consensus 169 ~~~~~~~~~~~~~~~~p~------------------------------------~~~~~~~~~~~~~------------d 200 (346)
T 1y8q_A 169 LGEHEFVEEKTKVAKVSQ------------------------------------GVEDGPDTKRAKL------------D 200 (346)
T ss_dssp CSEEEEEEECC---------------------------------------------------------------------
T ss_pred cCCCCEEEcCCCCcCCCc------------------------------------ccccCCCCCcccc------------c
Confidence 998788887666311111 1110 11122222 1
Q ss_pred cccccceeecceEEEeecCeeecccchHhhhcCCCCcccccC-ccCCCCChHHHHHHHHHHHHHHhCCCCCC-CCHHHHH
Q 001074 389 TTNYGTYVKGGIVTQVKQPKVLNFKPLREALEDPGDFLLSDF-SKFDRPPPLHLAFQALDKFVSELGRFPVA-GSEEDAQ 466 (1163)
Q Consensus 389 t~~f~~y~~gg~~~qvk~p~~i~fksL~e~L~~p~~~l~~d~-~k~~~~~~l~~~~~aL~~F~~~~gr~P~~-~~~~Da~ 466 (1163)
++ ++++.|++++|++|++.+..|.. ..++ .+.++++.+|++++||++|+++|||+|.+ ++++|++
T Consensus 201 ~~-----------~~~~~~~~~~f~~l~~~~~~~~~--~~~~~~~~~r~~~~~~~~~al~~f~~~~~~~P~~~~~~~d~~ 267 (346)
T 1y8q_A 201 SS-----------ETTMVKKKVVFCPVKEALEVDWS--SEKAKAALKRTTSDYFLLQVLLKFRTDKGRDPSSDTYEEDSE 267 (346)
T ss_dssp -------------CCCEEEEEEECCCHHHHTSCCSC--SHHHHHHHTTSCTHHHHHHHHHHHHHHSSSCCCGGGHHHHHH
T ss_pred CC-----------ceEEEeceeeccCHHHHhcCCch--hhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 11 34667899999999999998732 0111 24688999999999999999999999974 6799999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhhcccccCchhhHhhhhhhHHHHHhhcCCcccceeeeeeeccCCCC
Q 001074 467 KLISVATNINESLGDGRVEDINTKLLRHFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESLP 542 (1163)
Q Consensus 467 ~l~~ia~~i~~~~~~~~~~~i~~~li~~~~~~~~~el~PvaA~iGGiaAQEVIKaiTgkf~PI~q~~~fD~ie~Lp 542 (1163)
+|.+++++++++.+.. ...+++++++++ .++|+|||||+||++||||||+|||||+||+||||||+++++.
T Consensus 268 ~l~~~a~~~~~~~~~~-~~~~~~~~~~~~----~~~l~pv~AiiGGi~aQEviK~it~k~~Pl~n~~~fD~~~~~~ 338 (346)
T 1y8q_A 268 LLLQIRNDVLDSLGIS-PDLLPEDFVRYC----FSEMAPVCAVVGGILAQEIVKALSQRDPPHNNFFFFDGMKGNG 338 (346)
T ss_dssp HHHHHHHHHHHTTTCC-GGGSCGGGGGSS----CSBCHHHHHHHHHHHHHHHHHHHHTBSCCCCSEEEEETTTTEE
T ss_pred HHHHHHHHHHHhcCCC-cccCCHHHHHHh----cCCccHHHHHHHHHHHHHHHHHhcCCCcccccEEEEEccccce
Confidence 9999999998876532 234777776665 7899999999999999999999999999999999999999864
No 6
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=7.9e-56 Score=520.74 Aligned_cols=361 Identities=27% Similarity=0.481 Sum_probs=284.4
Q ss_pred cCchhhhhhhcCHHH-------------HH-HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCc
Q 001074 555 NSRYDAQISVFGAKL-------------QK-KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNL 620 (1163)
Q Consensus 555 ~~Rydrq~~l~G~~~-------------q~-kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNL 620 (1163)
..||.++..+++.++ ++ .|++++|+||||||+||+++++||++|| |+|+|+|+|+|+.|||
T Consensus 6 ~~r~~~vntl~~~~g~~~g~gf~~g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGv-----g~i~ivD~D~Ve~sNL 80 (434)
T 1tt5_B 6 EGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGF-----RQIHVIDMDTIDVSNL 80 (434)
T ss_dssp TTTTHHHHHHHHSCCSSCCTTCCCCSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTC-----CCEEEEECCBCCGGGT
T ss_pred hhhhccceEEEcCCCcccccccccCHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCC-----CEEEEEcCCEechhcc
Confidence 357777777755443 54 5699999999999999999999999999 9999999999999999
Q ss_pred CcccCcccCcccchHHHHHHHHHHhhCCCCeEEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccc--
Q 001074 621 SRQFLFRDWNIGQAKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYF-- 698 (1163)
Q Consensus 621 nRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~-- 698 (1163)
+|||||+.+|||++||++|+++++++||+++|+++..++.+. +.++++++|+||+|+||+++|+++++.|+.+
T Consensus 81 ~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~~-----~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~ 155 (434)
T 1tt5_B 81 NRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDF-----NDTFYRQFHIIVCGLDSIIARRWINGMLISLLN 155 (434)
T ss_dssp TTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEESCGGGB-----CHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCC
T ss_pred CCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEecccchh-----hHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999888753 3578999999999999999999999999874
Q ss_pred ----------cccEEecCCCCcccceEEEeCCcccccCCCCC--CCCCCCCCccccCCCCChhhHHHHHHHHhhhhccCC
Q 001074 699 ----------QKPLLESGTLGAKCNTQMVIPHLTENYGASRD--PPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKT 766 (1163)
Q Consensus 699 ----------~~PlI~sgt~G~~G~v~viip~~t~~y~~~~d--p~~~~~p~Ct~~~fP~~~~Hci~wAr~~F~~lF~~~ 766 (1163)
++|+|++|+.|+.|++++++|+.|+||.|..+ |+++..|.||++++|+.++|||+||+.+
T Consensus 156 ~~~g~~~~~~~iPli~~~~~g~~G~v~v~~p~~t~Cy~C~~~~~p~~~~~p~Ct~~~~p~~~~h~i~~a~~i-------- 227 (434)
T 1tt5_B 156 YEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRML-------- 227 (434)
T ss_dssp BSSSCBCGGGCCCEEEEEEETTEEEEEEECTTTSCCGGGGGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHT--------
T ss_pred ccccccccccCCcEEEeccccceeEEEEECCCCCCCcccccCCCCCcCCCcccccccCCcchhHHHHHHHHH--------
Confidence 99999999999999999999999999999643 6677899999999999999999999752
Q ss_pred hhhhhhccCCchhhhhhhhhcCchhHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCC
Q 001074 767 PAEVNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTG 846 (1163)
Q Consensus 767 ~~~~n~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~dci~~a~~~f~~~F~~~I~~Ll~~~p~d~~t~~g 846 (1163)
.|.. . +|
T Consensus 228 -------------------------------------------------~~~~--------------~--~~-------- 234 (434)
T 1tt5_B 228 -------------------------------------------------QWPK--------------E--QP-------- 234 (434)
T ss_dssp -------------------------------------------------HHHH--------------S--CT--------
T ss_pred -------------------------------------------------HHhh--------------h--cc--------
Confidence 0100 0 00
Q ss_pred CCCccCCCCCCCccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHhhhcCCCCcCCCCCcceeccccccc
Q 001074 847 APFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTNNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATT 926 (1163)
Q Consensus 847 ~~fWs~~kr~P~pl~fd~~~~~h~~fi~~~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~i~~~e~~~~ 926 (1163)
.+.
T Consensus 235 ---------~~~-------------------------------------------------------------------- 237 (434)
T 1tt5_B 235 ---------FGE-------------------------------------------------------------------- 237 (434)
T ss_dssp ---------TCT--------------------------------------------------------------------
T ss_pred ---------ccc--------------------------------------------------------------------
Confidence 000
Q ss_pred ccccCcCcHHHHHHHHHHHHHhhhcCCCCCCcCCceeeccCCCCchhHHHHHHhhhhhhccCCCCccHHHHHHHhCcccc
Q 001074 927 LSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIP 1006 (1163)
Q Consensus 927 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~p~~FeKDDd~n~hidFi~aasNlRa~ny~I~~~~~~~~k~iAG~IIP 1006 (1163)
|+.|++||+. |++||++.+|.||..|+|+.+++..++.++|+|||
T Consensus 238 ---------------------------------~~~~d~d~~~--~~~~v~~~a~~~~~~~gi~~~~~~~~~gv~~~iip 282 (434)
T 1tt5_B 238 ---------------------------------GVPLDGDDPE--HIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIP 282 (434)
T ss_dssp ---------------------------------TCCCCTTCHH--HHHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCC
T ss_pred ---------------------------------ccccCCCcHH--HHHHHHHHHHHHHHHcCCCccCHHHHHhHhhccCc
Confidence 2235555543 99999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHhcCCC-CcccccccccccccCcc-ccc-CCCCCcccccCCcceeEEeEEEcCCCCcHHHH
Q 001074 1007 AIATSTAMATGLVCLELYKVLDGGH-KLEDYRNTFANLALPLF-SMA-EPVPPKVIKHRDMSWTVWDRWILKDNPTLREL 1083 (1163)
Q Consensus 1007 AIaTTtA~vaGl~~lEl~K~l~~~~-~~~~~rn~f~nla~p~~-~~~-eP~~~~~~~~~~~~~t~Wd~~~v~~~~TL~el 1083 (1163)
|||||||+|+|++++|++|+|.+.. ++..|. .|--+...++ .+. ++.|.+.. ++ +.|+++.+++++||++|
T Consensus 283 aia~t~aiig~l~a~EaiK~l~g~~~~l~~~l-~~d~~~~~~~~~~~~~~~~~C~v--C~---~~~~~~~~~~~~tl~~~ 356 (434)
T 1tt5_B 283 AVASTNAVIAAVCATEVFKIATSAYIPLNNYL-VFNDVDGLYTYTFEAERKENCPA--CS---QLPQNIQFSPSAKLQEV 356 (434)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTCSCCCCSEE-EEECSBSCEEEEECCCCCTTCTT--TC---SSCBCCCC-----CTTH
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCcccCceE-EEEcCCCceeEEEeccCCCCCCc--cC---CCCceEEECCCccHHHH
Confidence 9999999999999999999999753 333321 1211111111 111 12222221 22 45778888888899999
Q ss_pred HHHHHHc---CCceeeeec----CCceeecCCCc----chhhcccCcHHHHH
Q 001074 1084 IQWLKDK---GLNAYSISC----GSCLLFNSMFP----RHKERMDKKVVDLA 1124 (1163)
Q Consensus 1084 i~~~~~k---~l~~~~I~~----g~~llY~~~~~----~~~~~l~~~l~~l~ 1124 (1163)
++++.++ +++.+||++ |+++||++++| ++++||+|+|+||.
T Consensus 357 ~~~l~~~~~~~~~~~~is~~~~~~~~~ly~~~~~~~~~~~~~~l~~~l~~l~ 408 (434)
T 1tt5_B 357 LDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELG 408 (434)
T ss_dssp HHHHHHCSSCCCSSCCCEET----TEECCCCCCTTTTTTSCC-CCC-----C
T ss_pred HHHHhccCccceEccEEEEEccCCCcEEEecCCcchhhhhHhhhcCCHHHcC
Confidence 9999886 689999987 68999998865 46789999999993
No 7
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=100.00 E-value=5.2e-52 Score=526.65 Aligned_cols=359 Identities=26% Similarity=0.454 Sum_probs=296.3
Q ss_pred chhhhhhhcCHHHHHHH-hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchH
Q 001074 557 RYDAQISVFGAKLQKKL-EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAK 635 (1163)
Q Consensus 557 Rydrq~~l~G~~~q~kL-~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~K 635 (1163)
+|...-..+|.+.|+++ +++||+||||||+||+++++||++|| |+|+|+|+|+|+.|||+|||||+.+|||++|
T Consensus 392 ~~~~~~~~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gv-----g~i~l~D~d~v~~snl~rq~~~~~~~vg~~K 466 (805)
T 2nvu_B 392 PFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGF-----RQIHVIDMDTIDVSNLNRQFLFRPKDIGRPK 466 (805)
T ss_dssp TTSCTTCCCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTC-----CEEEEEECCBCCGGGGGTCTTCCGGGTTSBH
T ss_pred CCCCcccCCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CcEEEECCCeecccccccccccchhhcCChH
Confidence 34444446899999988 99999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCeEEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccc------------cccEE
Q 001074 636 STVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYF------------QKPLL 703 (1163)
Q Consensus 636 a~vaa~~l~~~np~~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~------------~~PlI 703 (1163)
|++|+++++++||+++|+++..++.+. +.++++++|+||+|+||+++|++|++.|+.+ ++|+|
T Consensus 467 a~~~~~~l~~~np~~~v~~~~~~~~~~-----~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i 541 (805)
T 2nvu_B 467 AEVAAEFLNDRVPNCNVVPHFNKIQDF-----NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLI 541 (805)
T ss_dssp HHHHHHHHHHHSTTCEEEEEESCGGGS-----CHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEE
T ss_pred HHHHHHHHHHHCCCCEEEEEecccccc-----HHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEE
Confidence 999999999999999999999988753 3578999999999999999999999999874 99999
Q ss_pred ecCCCCcccceEEEeCCcccccCCCC--CCCCCCCCCccccCCCCChhhHHHHHHHHhhhhccCChhhhhhccCCchhhh
Q 001074 704 ESGTLGAKCNTQMVIPHLTENYGASR--DPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPVEYT 781 (1163)
Q Consensus 704 ~sgt~G~~G~v~viip~~t~~y~~~~--dp~~~~~p~Ct~~~fP~~~~Hci~wAr~~F~~lF~~~~~~~n~~l~~~~~~~ 781 (1163)
++|+.|+.|++.+++|+.|+||.|.. .|+....|.|+++++|+.++|||+||+...
T Consensus 542 ~~~~~g~~G~~~~~~p~~~~c~~c~~~~~p~~~~~~~c~~~~~~~~~~~~i~~a~~~~---------------------- 599 (805)
T 2nvu_B 542 DGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQ---------------------- 599 (805)
T ss_dssp EEEEETTEEEEEEECTTTSCCTTTSGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHTH----------------------
T ss_pred EeccccCceeEEEECCCCCCceeccCCCCCCCCCCCccccCCCCCCccHHHHHHHHhh----------------------
Confidence 99999999999999999999999964 477778999999999999999999987520
Q ss_pred hhhhhcCchhHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCccCCCCCCCccc
Q 001074 782 TSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQ 861 (1163)
Q Consensus 782 ~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~dci~~a~~~f~~~F~~~I~~Ll~~~p~d~~t~~g~~fWs~~kr~P~pl~ 861 (1163)
|.. . +..+.
T Consensus 600 -----------------------------------~~~-----~----------------------------~~~~~--- 608 (805)
T 2nvu_B 600 -----------------------------------WPK-----E----------------------------QPFGE--- 608 (805)
T ss_dssp -----------------------------------HHH-----H----------------------------CTTST---
T ss_pred -----------------------------------ccc-----c----------------------------cCCCC---
Confidence 100 0 00011
Q ss_pred cCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHhhhcCCCCcCCCCCcceecccccccccccCcCcHHHHHHH
Q 001074 862 FSSADPSHLHFVMAASILRAETFGIPIPDWTNNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDL 941 (1163)
Q Consensus 862 fd~~~~~h~~fi~~~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~i~~~e~~~~~~~~~~~~~~~~~~l 941 (1163)
T Consensus 609 -------------------------------------------------------------------------------- 608 (805)
T 2nvu_B 609 -------------------------------------------------------------------------------- 608 (805)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhhcCCCCCCcCCceeeccCCCCchhHHHHHHhhhhhhccCCCCccHHHHHHHhCcccchhhhhHHHHHHHHHH
Q 001074 942 IIKLEQCRKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCL 1021 (1163)
Q Consensus 942 ~~~l~~~~~~~~~~~~~~p~~FeKDDd~n~hidFi~aasNlRa~ny~I~~~~~~~~k~iAG~IIPAIaTTtA~vaGl~~l 1021 (1163)
|+.|++||.. |++||++.+|+||..|+|+.+++..++.++|+||||||||||+|+|++++
T Consensus 609 ------------------~~~~d~~~~~--~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~i~p~i~~~~aiig~~~a~ 668 (805)
T 2nvu_B 609 ------------------GVPLDGDDPE--HIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCAT 668 (805)
T ss_dssp ------------------TCCCCTTCHH--HHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHH
T ss_pred ------------------cccCCCCCHH--HHHHHHHHHHHHHHHhCCCCcCHHHHHHHhcccccccchHHHHHHHHHHH
Confidence 2335555543 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCC-CcccccccccccccCcc-ccc-CCCCCcccccCCcceeEEeEEEcCCCCcHHHHHHHHHHc---CCcee
Q 001074 1022 ELYKVLDGGH-KLEDYRNTFANLALPLF-SMA-EPVPPKVIKHRDMSWTVWDRWILKDNPTLRELIQWLKDK---GLNAY 1095 (1163)
Q Consensus 1022 El~K~l~~~~-~~~~~rn~f~nla~p~~-~~~-eP~~~~~~~~~~~~~t~Wd~~~v~~~~TL~eli~~~~~k---~l~~~ 1095 (1163)
|++|+|.+.. ++..+. .|--+....+ .+. ++.|.|.. ++ +.|+++.++.++||++|++.|.++ +++.+
T Consensus 669 e~ik~l~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~C~~--C~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (805)
T 2nvu_B 669 EVFKIATSAYIPLNNYL-VFNDVDGLYTYTFEAERKENCPA--CS---QLPQNIQFSPSAKLQEVLDYLTNSASLQMKSP 742 (805)
T ss_dssp HHHHHHHCSSCCCCSEE-EEECSBSCEEEEECCCCCTTCTT--TS---CCCEEEEECTTSBHHHHHHHHHHCTTTCCSSC
T ss_pred HHHHHHhccccccCceE-EecCCCCcccccccCCCCCCCCe--eC---ceeEEEEECCcChHHHHHHHHHhhhccCcccc
Confidence 9999999753 333221 1111111111 111 12222221 22 458889998889999999999886 69999
Q ss_pred eeec----CCceeecCCCcc----hhhcccCcHHHHH
Q 001074 1096 SISC----GSCLLFNSMFPR----HKERMDKKVVDLA 1124 (1163)
Q Consensus 1096 ~I~~----g~~llY~~~~~~----~~~~l~~~l~~l~ 1124 (1163)
||++ |+++||++++|+ +++||+|+|+||.
T Consensus 743 ~~~~~~~~~~~~ly~~~~~~~~~~~~~~l~~~l~~l~ 779 (805)
T 2nvu_B 743 AITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELG 779 (805)
T ss_dssp EEEEEETTEEEEEECCSSHHHHHHHGGGGGSBTTTTT
T ss_pred eEEEEccCCCcEEEecCccchhhhhHhhhcCCHHHcC
Confidence 9988 689999988764 6789999999993
No 8
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=5.3e-35 Score=335.98 Aligned_cols=165 Identities=24% Similarity=0.376 Sum_probs=154.4
Q ss_pred cCchhhhhhhcCHHHHHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccch
Q 001074 555 NSRYDAQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQA 634 (1163)
Q Consensus 555 ~~Rydrq~~l~G~~~q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~ 634 (1163)
..||+||+++||.++|++|++++|+||||||+||+++|+|+++|| |+|+|+|+|.|+.|||+|||||+++|||++
T Consensus 16 ~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gv-----g~itlvD~d~V~~sNL~rq~~~~~~diG~~ 90 (346)
T 1y8q_A 16 AAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGV-----KGLTMLDHEQVTPEDPGAQFLIRTGSVGRN 90 (346)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBCCSSCGGGCTTSCSSCTTSB
T ss_pred HHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEEECCCcchhhCCCCCccccccCcCC
Confidence 479999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecCCCCcccce
Q 001074 635 KSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNT 714 (1163)
Q Consensus 635 Ka~vaa~~l~~~np~~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sgt~G~~G~v 714 (1163)
||++++++++++||+++|+++..++.+ ..+++++++|+||+|+||.++|.++++.|+.+++|+|.+|+.|+.|++
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~-----~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G~v 165 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEK-----KPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYT 165 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGG-----CCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEEEEEBTEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCc-----chHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEeecccEEEE
Confidence 999999999999999999999988764 236789999999999999999999999999999999999999999999
Q ss_pred EEEeCCcccccCCCCC
Q 001074 715 QMVIPHLTENYGASRD 730 (1163)
Q Consensus 715 ~viip~~t~~y~~~~d 730 (1163)
.+.++ ...|+.|..+
T Consensus 166 ~~d~~-~~~~~~~~~~ 180 (346)
T 1y8q_A 166 FANLG-EHEFVEEKTK 180 (346)
T ss_dssp EEECS-EEEEEEECC-
T ss_pred EEecC-CCCEEEcCCC
Confidence 99887 3667766533
No 9
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=2.3e-35 Score=355.24 Aligned_cols=189 Identities=22% Similarity=0.345 Sum_probs=173.0
Q ss_pred CchhhhhhhcCHHHHHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchH
Q 001074 556 SRYDAQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAK 635 (1163)
Q Consensus 556 ~Rydrq~~l~G~~~q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~K 635 (1163)
.||+||+++||.++|++|++++|+||||||+||+++|+||++|| |+|+|+|+|+|+.|||+|||||+.+|||++|
T Consensus 13 ~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGV-----g~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~K 87 (531)
T 1tt5_A 13 QKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGI-----GSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 87 (531)
T ss_dssp HHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECCCBBCHHHHHHCTTCCGGGBTSBH
T ss_pred HHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCC-----CeEEEEeCCEechhhcccCccCChhhcCcHH
Confidence 69999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCeEEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecCCCCcccceE
Q 001074 636 STVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQ 715 (1163)
Q Consensus 636 a~vaa~~l~~~np~~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sgt~G~~G~v~ 715 (1163)
|++++++++++||+++|+++...+.+..+ ...+|++++|+||+|+||.++|.++++.|+.+++|+|++|+.|+.|++.
T Consensus 88 a~~a~~~l~~lNp~v~v~~~~~~~~~~~~--~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~ 165 (531)
T 1tt5_A 88 AEAAMEFLQELNSDVSGSFVEESPENLLD--NDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMR 165 (531)
T ss_dssp HHHHHHHHHTTCTTSBCCEESSCHHHHHH--SCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCcchhhh--hhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEEEecCCeEEEE
Confidence 99999999999999999999877653111 2357899999999999999999999999999999999999999999999
Q ss_pred EEeCCcccccCCCCCCCCCCCCCccccCCCCChhhHHHH
Q 001074 716 MVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTW 754 (1163)
Q Consensus 716 viip~~t~~y~~~~dp~~~~~p~Ct~~~fP~~~~Hci~w 754 (1163)
+++|. ..++.+ .|++...++|++++||..++||-.+
T Consensus 166 ~~~p~-~~~~d~--~~~~~~~~lr~~~p~P~~~~~~~~~ 201 (531)
T 1tt5_A 166 IIIKE-HPVIES--HPDNALEDLRLDKPFPELREHFQSY 201 (531)
T ss_dssp EECSC-EEESCC--CCSSCCCCCCSSSCCHHHHHHHHTC
T ss_pred EEcCC-ceeccC--CCCCCCCcccccCCCCCchhhhhcc
Confidence 99994 445554 3556678999999999999999554
No 10
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=2.9e-32 Score=320.66 Aligned_cols=282 Identities=18% Similarity=0.233 Sum_probs=212.2
Q ss_pred hhhhhhhhccC-------------HHHHH-HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCccccc
Q 001074 159 DLHSRQLAVYG-------------RETMR-RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVF 224 (1163)
Q Consensus 159 ~rYdRQi~l~G-------------~e~q~-kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~ 224 (1163)
.||.++-++|+ .++++ +|++++|+|+|+||+|+++|+||+++|||+|+|+|+|.|+.+||+|||++
T Consensus 7 ~r~~~vntl~~~~g~~~g~gf~~g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~ 86 (434)
T 1tt5_B 7 GRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLF 86 (434)
T ss_dssp TTTHHHHHHHHSCCSSCCTTCCCCSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTC
T ss_pred hhhccceEEEcCCCcccccccccCHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCC
Confidence 45666665554 44465 55999999999999999999999999999999999999999999999999
Q ss_pred CCCccCchHHHHHHHHHHHhcCCCEEEEeecCCC---hhhcCCCcEEEEecCChhHHHHHHHHHHhc------------C
Q 001074 225 SDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT---KEQLSDFQAVVFTDISLDKAIEFDDFCHNH------------Q 289 (1163)
Q Consensus 225 ~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l~---~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~------------~ 289 (1163)
+++|||++||++++++|+++||+|+|+.+...++ .+++++||+||+|.++.+.+..+|++|+.. +
T Consensus 87 ~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~~~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~ 166 (434)
T 1tt5_B 87 RPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSI 166 (434)
T ss_dssp CGGGTTSBHHHHHHHHHHHHSTTCCCEEEESCGGGBCHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGC
T ss_pred ChhHcCcHHHHHHHHHHHhhCCCCEEEEEecccchhhHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccC
Confidence 9999999999999999999999999999987764 468899999999999999999999999874 8
Q ss_pred CCceeEEeeecceeEEEEEEcCCceEEEcCCCCCCcceeecccccCCCceeecccccccccccCCeeEEEeeccccccCC
Q 001074 290 PAISFIKAEVRGLFGSVFCDFGPEFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELND 369 (1163)
Q Consensus 290 ~~IpfI~~~~~G~~G~vf~d~g~~f~v~d~~ge~p~~~~I~~I~~~~~~lv~~~d~~rh~~~dgd~V~f~ev~gm~eln~ 369 (1163)
+|+|++++.|+.|++++..+..- +.+. |+-+ .
T Consensus 167 --iPli~~~~~g~~G~v~v~~p~~t--------~Cy~---------------C~~~--------------------~--- 198 (434)
T 1tt5_B 167 --VPLIDGGTEGFKGNARVILPGMT--------ACIE---------------CTLE--------------------L--- 198 (434)
T ss_dssp --CCEEEEEEETTEEEEEEECTTTS--------CCGG---------------GGGG--------------------G---
T ss_pred --CcEEEeccccceeEEEEECCCCC--------CCcc---------------cccC--------------------C---
Confidence 99999999999999998764210 0000 0000 0
Q ss_pred CCCccccccCcceeeeccccccccceeecceEEEeecCeeecccchHhhhcCCCCcccccCccCCCCChHHHHHHHHHH-
Q 001074 370 GKPRKIKSARPYSFTLEEDTTNYGTYVKGGIVTQVKQPKVLNFKPLREALEDPGDFLLSDFSKFDRPPPLHLAFQALDK- 448 (1163)
Q Consensus 370 ~~~~~i~~~~~~~f~i~~Dt~~f~~y~~gg~~~qvk~p~~i~fksL~e~L~~p~~~l~~d~~k~~~~~~l~~~~~aL~~- 448 (1163)
.| . +.....+++.. .| + ..-|.+..|..-
T Consensus 199 -~p---------------~------------------~~~~p~Ct~~~---~p------------~-~~~h~i~~a~~i~ 228 (434)
T 1tt5_B 199 -YP---------------P------------------QVNFPMCTIAS---MP------------R-LPEHCIEYVRMLQ 228 (434)
T ss_dssp -SC---------------C------------------CCCCCHHHHHH---CC------------C-SHHHHHHHHHHTH
T ss_pred -CC---------------C------------------cCCCccccccc---CC------------c-chhHHHHHHHHHH
Confidence 00 0 00000011111 11 0 112333333322
Q ss_pred HHHHhCCC---C-CCCCHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhhcccccCchhhHhhhhhhHHHHHhhcC
Q 001074 449 FVSELGRF---P-VAGSEEDAQKLISVATNINESLGDGRVEDINTKLLRHFAFGARAVLNPMAAMFGGIVGQEVVKACSG 524 (1163)
Q Consensus 449 F~~~~gr~---P-~~~~~~Da~~l~~ia~~i~~~~~~~~~~~i~~~li~~~~~~~~~el~PvaA~iGGiaAQEVIKaiTg 524 (1163)
|...+..- + ...+.++.+.+.+.++......+. ..++...+..++....+.++|++|++||+.|||+||++||
T Consensus 229 ~~~~~~~~~~~~~d~d~~~~~~~v~~~a~~~~~~~gi---~~~~~~~~~gv~~~iipaia~t~aiig~l~a~EaiK~l~g 305 (434)
T 1tt5_B 229 WPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNI---RGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATS 305 (434)
T ss_dssp HHHSCTTCTTCCCCTTCHHHHHHHHHHHHHHHHHTTC---CCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhhcccccccccCCCcHHHHHHHHHHHHHHHHHcCC---CccCHHHHHhHhhccCcccccHHHHHHHHHHHHHHHHHhC
Confidence 22222111 1 112467788888888888887764 3456778888888888889999999999999999999999
Q ss_pred CcccceeeeeeeccCCC
Q 001074 525 KFHPLYQFFYFDSVESL 541 (1163)
Q Consensus 525 kf~PI~q~~~fD~ie~L 541 (1163)
+..|++++++||+....
T Consensus 306 ~~~~l~~~l~~d~~~~~ 322 (434)
T 1tt5_B 306 AYIPLNNYLVFNDVDGL 322 (434)
T ss_dssp CSCCCCSEEEEECSBSC
T ss_pred CCcccCceEEEEcCCCc
Confidence 99999999999998765
No 11
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=1.8e-33 Score=314.70 Aligned_cols=164 Identities=25% Similarity=0.419 Sum_probs=127.6
Q ss_pred Cchhhhhhh--cCH-HHHHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCccc
Q 001074 556 SRYDAQISV--FGA-KLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIG 632 (1163)
Q Consensus 556 ~Rydrq~~l--~G~-~~q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG 632 (1163)
--|+|||.+ ||. ++|++|++++|+||||||+||+++++||++|| |+|+|+|.|+||.|||+||| |+.+|||
T Consensus 14 ~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGV-----G~i~lvD~D~Ve~sNL~Rq~-~~~~diG 87 (292)
T 3h8v_A 14 LVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGI-----GKLLLFDYDKVELANMNRLF-FQPHQAG 87 (292)
T ss_dssp ------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBC-------------CCTT
T ss_pred CCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCC-----CEEEEECCCccChhhccccc-CChhhcC
Confidence 359999988 998 89999999999999999999999999999999 99999999999999999996 6899999
Q ss_pred chHHHHHHHHHHhhCCCCeEEEEeccCCcccccccchhhh-----------ccCCEEEEccCchHHHHHHHhhccccccc
Q 001074 633 QAKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFW-----------ENITCVINALDNVNARLYVDQRCLYFQKP 701 (1163)
Q Consensus 633 ~~Ka~vaa~~l~~~np~~~I~~~~~~v~~~~e~~~~~~f~-----------~~~DvVi~alDn~~aR~~v~~~c~~~~~P 701 (1163)
++|+++|+++++++||+++|+++..++++.. + + ++|+ +++|+||+|+||+++|+++|+.|+.+++|
T Consensus 88 ~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~~~-~-~-~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~P 164 (292)
T 3h8v_A 88 LSKVQAAEHTLRNINPDVLFEVHNYNITTVE-N-F-QHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQT 164 (292)
T ss_dssp SBHHHHHHHHHHHHCTTSEEEEECCCTTSHH-H-H-HHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCC
T ss_pred chHHHHHHHHHHhhCCCcEEEEecccCCcHH-H-H-HHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCC
Confidence 9999999999999999999999999887521 1 1 3444 68999999999999999999999999999
Q ss_pred EEecCCCC--cccceEEEeCCcccccCCC
Q 001074 702 LLESGTLG--AKCNTQMVIPHLTENYGAS 728 (1163)
Q Consensus 702 lI~sgt~G--~~G~v~viip~~t~~y~~~ 728 (1163)
+|++|+.| +.|++.+++|+.|+||.|.
T Consensus 165 li~~gv~~~~~~Gqv~~~~pg~t~Cy~Cl 193 (292)
T 3h8v_A 165 WMESGVSENAVSGHIQLIIPGESACFACA 193 (292)
T ss_dssp EEEEEECTTSSEEEEEEECTTTSCCTTSS
T ss_pred EEEeeeecceeEEEEEEECCCCCCCHhhc
Confidence 99999986 7899999999999999995
No 12
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=99.97 E-value=1.9e-32 Score=301.70 Aligned_cols=165 Identities=31% Similarity=0.464 Sum_probs=155.8
Q ss_pred cCchhhhhhh--cCHHHHHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCccc
Q 001074 555 NSRYDAQISV--FGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIG 632 (1163)
Q Consensus 555 ~~Rydrq~~l--~G~~~q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG 632 (1163)
..||+||+++ ||.++|++|++++|+||||||+||+++++|+++|| |+|+|+|.|.|+.|||+||+||+.+|||
T Consensus 6 ~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gv-----g~i~lvD~d~v~~sNL~Rq~l~~~~diG 80 (251)
T 1zud_1 6 FMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGV-----GTLVLADDDDVHLSNLQRQILFTTEDID 80 (251)
T ss_dssp HHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTC-----SEEEEECCCBCCGGGTTTCTTCCGGGTT
T ss_pred HHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCC-----CeEEEEeCCCcccccCCCCccCChhhCC
Confidence 3799999999 99999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred chHHHHHHHHHHhhCCCCeEEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecCCCCccc
Q 001074 633 QAKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKC 712 (1163)
Q Consensus 633 ~~Ka~vaa~~l~~~np~~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sgt~G~~G 712 (1163)
++|+++++++++++||+++|+++..++.+++. .++++++|+||+|+||.++|.++++.|+..++|+|.+|+.|+.|
T Consensus 81 ~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~----~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~~~g~~G 156 (251)
T 1zud_1 81 RPKSQVSQQRLTQLNPDIQLTALQQRLTGEAL----KDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGG 156 (251)
T ss_dssp SBHHHHHHHHHHHHCTTSEEEEECSCCCHHHH----HHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEBTEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeccCCHHHH----HHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEeccccce
Confidence 99999999999999999999999888765321 46788999999999999999999999999999999999999999
Q ss_pred ceEEEeCCc-ccccCCC
Q 001074 713 NTQMVIPHL-TENYGAS 728 (1163)
Q Consensus 713 ~v~viip~~-t~~y~~~ 728 (1163)
++.++.|.. +.||.|.
T Consensus 157 ~v~~~~p~~~~~c~~cl 173 (251)
T 1zud_1 157 QLMVLTPPWEQGCYRCL 173 (251)
T ss_dssp EEEEECTTCTTCCHHHH
T ss_pred EEEEEccCCCCCcEEEe
Confidence 999999987 6899884
No 13
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=99.97 E-value=6.9e-31 Score=289.28 Aligned_cols=152 Identities=27% Similarity=0.406 Sum_probs=145.2
Q ss_pred chhHhhhhhhhhc--cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCch
Q 001074 155 DIDEDLHSRQLAV--YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKN 232 (1163)
Q Consensus 155 ~~d~~rYdRQi~l--~G~e~q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~ 232 (1163)
+.+.+||+||+++ ||.++|++|++++|+|+|+||+|++++++|+++|||+|+|+|.|.|+++||+|||+++++|+|++
T Consensus 3 ~~e~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~ 82 (251)
T 1zud_1 3 DRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRP 82 (251)
T ss_dssp HHHHHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSB
T ss_pred HHHHHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCH
Confidence 4567899999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeecCCCh----hhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEeeecceeEEEEE
Q 001074 233 RALASVQKLQELNNAVVLSTLTSKLTK----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVFC 308 (1163)
Q Consensus 233 Kaea~~~~L~eLNp~V~V~~~~~~l~~----e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~~~~G~~G~vf~ 308 (1163)
||++++++|+++||+++|+.+...+++ +++.++|+||.|.++.+.+..++++|++++ +|+|++++.|+.|++++
T Consensus 83 Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~--~p~i~~~~~g~~G~v~~ 160 (251)
T 1zud_1 83 KSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALN--TPLITASAVGFGGQLMV 160 (251)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTT--CCEEEEEEEBTEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhC--CCEEEEeccccceEEEE
Confidence 999999999999999999999888865 357789999999999999999999999999 99999999999999986
No 14
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=99.97 E-value=3e-30 Score=327.40 Aligned_cols=275 Identities=19% Similarity=0.246 Sum_probs=212.4
Q ss_pred hccCHHHHHHh-hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHh
Q 001074 166 AVYGRETMRRL-FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL 244 (1163)
Q Consensus 166 ~l~G~e~q~kL-~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eL 244 (1163)
+.+|.++|+++ ++++|+|||+||+|+++|+||+++|||+|+|+|.|.|+.+||+|||+++++|||++||++++++|+++
T Consensus 398 ~~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~ 477 (805)
T 2nvu_B 398 FEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDR 477 (805)
T ss_dssp CCCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHH
Confidence 45899999988 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeecCCC---hhhcCCCcEEEEecCChhHHHHHHHHHHhc------------CCCceeEEeeecceeEEEEEE
Q 001074 245 NNAVVLSTLTSKLT---KEQLSDFQAVVFTDISLDKAIEFDDFCHNH------------QPAISFIKAEVRGLFGSVFCD 309 (1163)
Q Consensus 245 Np~V~V~~~~~~l~---~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~------------~~~IpfI~~~~~G~~G~vf~d 309 (1163)
||.|+|+.+...++ .+++.+||+||+|.++.+.+..||+.|+.. + +|+|++++.|+.|++++.
T Consensus 478 np~~~v~~~~~~~~~~~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~--~p~i~~~~~g~~G~~~~~ 555 (805)
T 2nvu_B 478 VPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSI--VPLIDGGTEGFKGNARVI 555 (805)
T ss_dssp STTCEEEEEESCGGGSCHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGC--CCEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEEeccccccHHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccC--CcEEEeccccCceeEEEE
Confidence 99999999988774 367889999999999999999999999884 8 999999999999999987
Q ss_pred cCCceEEEcCCCCCCcceeecccccCCCceeecccccccccccCCeeEEEeeccccccCCCCCccccccCcceeeecccc
Q 001074 310 FGPEFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKIKSARPYSFTLEEDT 389 (1163)
Q Consensus 310 ~g~~f~v~d~~ge~p~~~~I~~I~~~~~~lv~~~d~~rh~~~dgd~V~f~ev~gm~eln~~~~~~i~~~~~~~f~i~~Dt 389 (1163)
.+..- ..+. |+-+ . .|..
T Consensus 556 ~p~~~--------~c~~---------------c~~~---------------------~---~p~~--------------- 573 (805)
T 2nvu_B 556 LPGMT--------ACIE---------------CTLE---------------------L---YPPQ--------------- 573 (805)
T ss_dssp CTTTS--------CCTT---------------TSGG---------------------G---SCCC---------------
T ss_pred CCCCC--------Ccee---------------ccCC---------------------C---CCCC---------------
Confidence 64310 0000 0000 0 0000
Q ss_pred ccccceeecceEEEeecCeeecccchHhhhcCCCCcccccCccCCCCChHHHHHHHHHH-HHHHhCCC---C-CCCCHHH
Q 001074 390 TNYGTYVKGGIVTQVKQPKVLNFKPLREALEDPGDFLLSDFSKFDRPPPLHLAFQALDK-FVSELGRF---P-VAGSEED 464 (1163)
Q Consensus 390 ~~f~~y~~gg~~~qvk~p~~i~fksL~e~L~~p~~~l~~d~~k~~~~~~l~~~~~aL~~-F~~~~gr~---P-~~~~~~D 464 (1163)
.....+++.. .| | ..-|.+..|..- |..++..- + ...+.++
T Consensus 574 ------------------~~~~~c~~~~---~~------------~-~~~~~i~~a~~~~~~~~~~~~~~~~~d~~~~~~ 619 (805)
T 2nvu_B 574 ------------------VNFPMCTIAS---MP------------R-LPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEH 619 (805)
T ss_dssp ------------------CCCCHHHHHH---CC------------C-SHHHHHHHHHHTHHHHHCTTSTTCCCCTTCHHH
T ss_pred ------------------CCCCccccCC---CC------------C-CccHHHHHHHHhhcccccCCCCcccCCCCCHHH
Confidence 0000112211 11 1 111222222211 22222211 1 1234677
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhhcccccCchhhHhhhhhhHHHHHhhcCCcccceeeeeeeccCCC
Q 001074 465 AQKLISVATNINESLGDGRVEDINTKLLRHFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESL 541 (1163)
Q Consensus 465 a~~l~~ia~~i~~~~~~~~~~~i~~~li~~~~~~~~~el~PvaA~iGGiaAQEVIKaiTgkf~PI~q~~~fD~ie~L 541 (1163)
.+.+.+.++..+...+. ..++...++.++....+.++|++|++||+.|||+||++||+..|++|+++||+..+.
T Consensus 620 ~~~~~~~~~~~~~~~gi---~~~~~~~~~~~~~~i~p~i~~~~aiig~~~a~e~ik~l~~~~~~l~~~~~~~~~~~~ 693 (805)
T 2nvu_B 620 IQWIFQKSLERASQYNI---RGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGL 693 (805)
T ss_dssp HHHHHHHHHHHHHHTTC---CCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHCSSCCCCSEEEEECSBSC
T ss_pred HHHHHHHHHHHHHHhCC---CCcCHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhccccccCceEEecCCCCc
Confidence 88888888888887764 345677888888888889999999999999999999999999999999999998765
No 15
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.97 E-value=4.5e-31 Score=290.45 Aligned_cols=164 Identities=30% Similarity=0.448 Sum_probs=154.6
Q ss_pred Cchhhhhhh--cCHHHHHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccc
Q 001074 556 SRYDAQISV--FGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQ 633 (1163)
Q Consensus 556 ~Rydrq~~l--~G~~~q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~ 633 (1163)
.||+||+++ ||.++|++|++++|+|||+||+|++++++|+++|+ |+|+|+|.|.|+.|||+||+||+.+|||+
T Consensus 10 ~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv-----~~i~lvD~d~v~~sNl~Rq~l~~~~diG~ 84 (249)
T 1jw9_B 10 LRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGV-----GNLTLLDFDTVSLSNLQRQTLHSDATVGQ 84 (249)
T ss_dssp HHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBCCGGGGGTCTTCCGGGTTS
T ss_pred HHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCC-----CeEEEEcCCCcccccCCcccccChhhcCc
Confidence 799999999 99999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhCCCCeEEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecCCCCcccc
Q 001074 634 AKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCN 713 (1163)
Q Consensus 634 ~Ka~vaa~~l~~~np~~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sgt~G~~G~ 713 (1163)
+|++++++++.++||+++|+++..++.+++ + .++++++|+||+|+||.++|..+++.|+..++|+|+++..|+.|+
T Consensus 85 ~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~--~--~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g~~g~ 160 (249)
T 1jw9_B 85 PKVESARDALTRINPHIAITPVNALLDDAE--L--AALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ 160 (249)
T ss_dssp BHHHHHHHHHHHHCTTSEEEEECSCCCHHH--H--HHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEEeccCCHhH--H--HHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeeccceEE
Confidence 999999999999999999999988776432 1 457889999999999999999999999999999999999999999
Q ss_pred eEEEeCCc-ccccCCC
Q 001074 714 TQMVIPHL-TENYGAS 728 (1163)
Q Consensus 714 v~viip~~-t~~y~~~ 728 (1163)
+.++.|.. +.||.|.
T Consensus 161 v~~~~p~~~~~c~~c~ 176 (249)
T 1jw9_B 161 ITVFTYQDGEPCYRCL 176 (249)
T ss_dssp EEEECCCTTCCCTHHH
T ss_pred EEEEeCCCCCCceEEE
Confidence 99999876 6899883
No 16
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.97 E-value=3.1e-30 Score=297.19 Aligned_cols=166 Identities=25% Similarity=0.426 Sum_probs=152.2
Q ss_pred cCchhhhhh---hcC--HHH-HHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCccc
Q 001074 555 NSRYDAQIS---VFG--AKL-QKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRD 628 (1163)
Q Consensus 555 ~~Rydrq~~---l~G--~~~-q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~ 628 (1163)
.+||+||+. +|| .++ |++|++++|+||||||+||+++++||++|| |+|+|+|.|.|+.|||+||+||+.
T Consensus 92 ~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGv-----g~i~lvD~D~Ve~sNL~Rq~l~~~ 166 (353)
T 3h5n_A 92 NNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGI-----GEIILIDNDQIENTNLTRQVLFSE 166 (353)
T ss_dssp TSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEEECCBCCGGGGGTCTTCCG
T ss_pred HHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCC-----CeEEEECCCcCcccccccccCCCh
Confidence 479999986 456 455 999999999999999999999999999999 999999999999999999999999
Q ss_pred CcccchHHHHHHHHHHhhCCCCeEEEEeccCCcccccccchhhhccCCEEEEccCchH-HHHHHHhhcccccccEEecCC
Q 001074 629 WNIGQAKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVN-ARLYVDQRCLYFQKPLLESGT 707 (1163)
Q Consensus 629 ~dIG~~Ka~vaa~~l~~~np~~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~-aR~~v~~~c~~~~~PlI~sgt 707 (1163)
+|||++|+++++++++++||+++|+++..++.+++. + .+ ++++|+||+|+||+. +|.++++.|+.+++|+|.+|.
T Consensus 167 ~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~-~--~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~ 242 (353)
T 3h5n_A 167 DDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTD-L--HK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGY 242 (353)
T ss_dssp GGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGG-G--GG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHCCChHHHHHHHHHHHHCCCCeEEEeecccCchhh-h--hH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEE
Confidence 999999999999999999999999999999886542 1 33 789999999999999 999999999999999999999
Q ss_pred CCcccceEE-EeCCcccccCCCC
Q 001074 708 LGAKCNTQM-VIPHLTENYGASR 729 (1163)
Q Consensus 708 ~G~~G~v~v-iip~~t~~y~~~~ 729 (1163)
.|..|.+.. ++|+.++||.|..
T Consensus 243 ~g~~g~~g~~~~p~~~~C~~C~~ 265 (353)
T 3h5n_A 243 VNDIAVFGPLYVPGKTGCYECQK 265 (353)
T ss_dssp ETTEEEEEEEECTTTSCCTTTTC
T ss_pred eCCEEEEEEEEcCCCCCChhhcC
Confidence 999998754 5699999999953
No 17
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.96 E-value=1.1e-29 Score=288.33 Aligned_cols=158 Identities=19% Similarity=0.281 Sum_probs=142.4
Q ss_pred hhcCHHHHHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHH
Q 001074 563 SVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASA 642 (1163)
Q Consensus 563 ~l~G~~~q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~ 642 (1163)
++++..++++|+++||+||||||+||+++++|+++|| |+|+|+|.|+|+.|||+||+||+.+|||++|+++|+++
T Consensus 22 Rll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGV-----g~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~ 96 (340)
T 3rui_A 22 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAAS 96 (340)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHH
T ss_pred hhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCC-----CEEEEecCCEeccccccccccCChhhcChHHHHHHHHH
Confidence 6677778899999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHhhCCCCeEEEEeccCCc-------------ccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecCCCC
Q 001074 643 ATSINPRLNIEALQNRVGP-------------ETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLG 709 (1163)
Q Consensus 643 l~~~np~~~I~~~~~~v~~-------------~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sgt~G 709 (1163)
++++||+++|+++...+.. +.++. .++++++|+||+|+||+++|+++++.|+.+++|+|+++ .|
T Consensus 97 L~~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l--~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa-~G 173 (340)
T 3rui_A 97 LKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRL--RALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LG 173 (340)
T ss_dssp HHHHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHH--HHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEE-EC
T ss_pred HHHhCCCCEEEEEeccccccCcccchhhhhcCCHHHH--HhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEEEee-ec
Confidence 9999999999999866520 00111 46789999999999999999999999999999999976 89
Q ss_pred cccceEEEe-------CCcccccCCC
Q 001074 710 AKCNTQMVI-------PHLTENYGAS 728 (1163)
Q Consensus 710 ~~G~v~vii-------p~~t~~y~~~ 728 (1163)
+.|++.++. |..++||.|.
T Consensus 174 ~~G~l~v~~g~~~~~~~~~~~Cy~C~ 199 (340)
T 3rui_A 174 FDSYLVMRHGNRDEQSSKQLGCYFCH 199 (340)
T ss_dssp SSEEEEEECCCCCSSCCCCBCCGGGG
T ss_pred ceEEEEEeecccccCCCCCCCeeeeC
Confidence 999998763 5678999995
No 18
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=99.96 E-value=9.9e-28 Score=291.33 Aligned_cols=147 Identities=20% Similarity=0.331 Sum_probs=138.7
Q ss_pred hhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHH
Q 001074 164 QLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE 243 (1163)
Q Consensus 164 Qi~l~G~e~q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~e 243 (1163)
|+++||.++|++|++++|+|||+||+|+++|+||+++|||+|+|+|.|.|+.+||+|||+++++|||++||++++++|++
T Consensus 3 qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~ 82 (640)
T 1y8q_B 3 LSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQ 82 (640)
T ss_dssp ---CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHT
T ss_pred hhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEeecCCC-----hhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEeeecceeEEEEEEcCC
Q 001074 244 LNNAVVLSTLTSKLT-----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVFCDFGP 312 (1163)
Q Consensus 244 LNp~V~V~~~~~~l~-----~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~~~~G~~G~vf~d~g~ 312 (1163)
+||+|+|+++...++ .+++.+||+||+|.++.+.+..+|++|+.++ +|+|.+++.|+.|++++..+.
T Consensus 83 iNP~v~V~a~~~~i~~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~--iPlI~~g~~G~~G~v~vi~p~ 154 (640)
T 1y8q_B 83 FYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAAD--VPLIESGTAGYLGQVTTIKKG 154 (640)
T ss_dssp TCTTCEEEEEESCTTSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHT--CCEEEEEEETTEEEEEEECTT
T ss_pred HCCCCeEEEEecccchhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcC--CCEEEEEEecccceEEEECCC
Confidence 999999999988774 3578999999999999999999999999999 999999999999999998753
No 19
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.3e-30 Score=324.75 Aligned_cols=185 Identities=22% Similarity=0.314 Sum_probs=163.4
Q ss_pred ccCchhhhhhhcCHHHHHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccc
Q 001074 554 INSRYDAQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQ 633 (1163)
Q Consensus 554 ~~~Rydrq~~l~G~~~q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~ 633 (1163)
...||+||+++||.++|++|++++|+||||||+||++|++||++|| |+|+|+|.|.|+.|||+|||+++.+|||+
T Consensus 6 d~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGV-----g~itlvD~D~V~~sNL~RQ~l~~~~dvG~ 80 (1015)
T 3cmm_A 6 DESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGV-----KSMTVFDPEPVQLADLSTQFFLTEKDIGQ 80 (1015)
T ss_dssp CHHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCC-----SEEEEECCSBCCGGGGGTCTTCCGGGTTS
T ss_pred hhHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCC-----CeEEEecCCEechhhhccccccChhhcCh
Confidence 3479999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhCCCCeEEEEeccCCcccccccchhhhccCCEEEEccC-chHHHHHHHhhcccccccEEecCCCCccc
Q 001074 634 AKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALD-NVNARLYVDQRCLYFQKPLLESGTLGAKC 712 (1163)
Q Consensus 634 ~Ka~vaa~~l~~~np~~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alD-n~~aR~~v~~~c~~~~~PlI~sgt~G~~G 712 (1163)
+||++++++++++||+++|+++...+. .++++++|+||+|.| |.++|..+++.|+.+++|+|.+++.|+.|
T Consensus 81 ~Ka~a~~~~L~~lNP~v~v~~~~~~l~--------~~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI~~~~~G~~G 152 (1015)
T 3cmm_A 81 KRGDVTRAKLAELNAYVPVNVLDSLDD--------VTQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFG 152 (1015)
T ss_dssp BHHHHHHHHHTTSCTTSCEEECCCCCC--------STTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEEEEEEETTEE
T ss_pred HHHHHHHHHHHHHCCCCeEEEecCCCC--------HHHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence 999999999999999999999987764 357889999999999 99999999999999999999999999999
Q ss_pred ceEEEeCCcccccCCCC-CC-CCCCCCCccccCCCCChhhHHHHHH
Q 001074 713 NTQMVIPHLTENYGASR-DP-PEKQAPMCTVHSFPHNIDHCLTWAR 756 (1163)
Q Consensus 713 ~v~viip~~t~~y~~~~-dp-~~~~~p~Ct~~~fP~~~~Hci~wAr 756 (1163)
++.+. ..+||.|.. ++ +.....+|++ +-| .+.||+.|-|
T Consensus 153 ~v~~d---~~~~~~c~~~~~~~p~~~~i~~i-~~p-~~v~~l~~~~ 193 (1015)
T 3cmm_A 153 NTFVD---LGDEFTVLDPTGEEPRTGMVSDI-EPD-GTVTMLDDNR 193 (1015)
T ss_dssp EEEEE---CCSCEEESBSSCCCCCEEEEEEE-CTT-CEEEESTTCC
T ss_pred EEEec---CCCceEEeeCCCCCCccccccCC-CCC-ceeEeeeccc
Confidence 98664 357888842 22 2234556666 445 4678887645
No 20
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.95 E-value=1.7e-27 Score=261.88 Aligned_cols=153 Identities=20% Similarity=0.321 Sum_probs=145.6
Q ss_pred CchhHhhhhhhhhc--cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCc
Q 001074 154 TDIDEDLHSRQLAV--YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGK 231 (1163)
Q Consensus 154 ~~~d~~rYdRQi~l--~G~e~q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk 231 (1163)
++.+.+||+||+++ ||.++|++|++++|+|+|+||+|+++|++|+++||++|+|+|.|.|+++||+||++++++|+|+
T Consensus 5 ~~~e~~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~ 84 (249)
T 1jw9_B 5 SDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQ 84 (249)
T ss_dssp CHHHHHHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTS
T ss_pred CHHHHHHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCc
Confidence 45666899999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEeecCCCh----hhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEeeecceeEEEE
Q 001074 232 NRALASVQKLQELNNAVVLSTLTSKLTK----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVF 307 (1163)
Q Consensus 232 ~Kaea~~~~L~eLNp~V~V~~~~~~l~~----e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~~~~G~~G~vf 307 (1163)
+||++++++|+++||.++++.+...+++ +++.++|+||+|.++.+.+..++++|++.+ +|+|++++.|+.|+++
T Consensus 85 ~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~--~p~i~~~~~g~~g~v~ 162 (249)
T 1jw9_B 85 PKVESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAK--VPLVSGAAIRMEGQIT 162 (249)
T ss_dssp BHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHT--CCEEEEEEEBTEEEEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcC--CCEEEeeeccceEEEE
Confidence 9999999999999999999998888764 357899999999999999999999999999 9999999999999997
Q ss_pred E
Q 001074 308 C 308 (1163)
Q Consensus 308 ~ 308 (1163)
+
T Consensus 163 ~ 163 (249)
T 1jw9_B 163 V 163 (249)
T ss_dssp E
T ss_pred E
Confidence 6
No 21
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.95 E-value=4.6e-28 Score=291.05 Aligned_cols=165 Identities=19% Similarity=0.278 Sum_probs=145.8
Q ss_pred Cchhhhhhh-------cCHHHHHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCccc
Q 001074 556 SRYDAQISV-------FGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRD 628 (1163)
Q Consensus 556 ~Rydrq~~l-------~G~~~q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~ 628 (1163)
.||+||+++ ++..+|++|++++|+||||||+||+++++||++|| |+|+|+|.|+||.|||+||+||+.
T Consensus 301 a~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGV-----G~ItLvD~D~Ve~SNL~RQ~L~~~ 375 (598)
T 3vh1_A 301 ADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNF 375 (598)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTC-----CEEEEECCSBCCTTSTTTSTTCCS
T ss_pred HHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEECCCcccccccccccccch
Confidence 679988876 56667899999999999999999999999999999 999999999999999999999999
Q ss_pred CcccchHHHHHHHHHHhhCCCCeEEEEeccCC-------cc------cccccchhhhccCCEEEEccCchHHHHHHHhhc
Q 001074 629 WNIGQAKSTVAASAATSINPRLNIEALQNRVG-------PE------TENVFDDTFWENITCVINALDNVNARLYVDQRC 695 (1163)
Q Consensus 629 ~dIG~~Ka~vaa~~l~~~np~~~I~~~~~~v~-------~~------~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c 695 (1163)
+|||++||++|+++++++||+++|+++..++. ++ .+++ .++++++|+||+|+||+++|+++++.|
T Consensus 376 ~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l--~~li~~~DvVvdatDn~~tR~lin~~c 453 (598)
T 3vh1_A 376 EDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRL--RALIKEHDIIFLLVDSRESRWLPSLLS 453 (598)
T ss_dssp TTCSSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHH--HHHHHHCSEEEECCSBGGGTHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHH--HHHHhcCCEEEECCCCHHHHHHHHHHH
Confidence 99999999999999999999999999987752 11 1111 467899999999999999999999999
Q ss_pred ccccccEEecCCCCcccceEEEe---C----CcccccCCC
Q 001074 696 LYFQKPLLESGTLGAKCNTQMVI---P----HLTENYGAS 728 (1163)
Q Consensus 696 ~~~~~PlI~sgt~G~~G~v~vii---p----~~t~~y~~~ 728 (1163)
+.+++|+|++ +.|+.|++.++- | ..++||.|.
T Consensus 454 ~~~~~plI~a-a~G~~Gqv~v~~g~~p~~~~~~~~Cy~Cl 492 (598)
T 3vh1_A 454 NIENKTVINA-ALGFDSYLVMRHGNRDEQSSKQLGCYFCH 492 (598)
T ss_dssp HHTTCEEEEE-EECSSEEEEEEEC--------CBCCTTTS
T ss_pred HhcCCCEEEE-EECCccEEEEEccCCCccCCCCCCceeec
Confidence 9999999985 689999987663 3 357899995
No 22
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.95 E-value=2.6e-28 Score=293.03 Aligned_cols=160 Identities=19% Similarity=0.259 Sum_probs=141.8
Q ss_pred hhcCHHHHHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHH
Q 001074 563 SVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASA 642 (1163)
Q Consensus 563 ~l~G~~~q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~ 642 (1163)
++++..++++|+++||+||||||+||+++++||++|| |+|+|+|.|+|+.|||+||+||+.+|||++||++|+++
T Consensus 314 Rllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGV-----G~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~ 388 (615)
T 4gsl_A 314 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAAS 388 (615)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHH
T ss_pred hhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHH
Confidence 5678888899999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHhhCCCCeEEEEeccCC-------ccccccc----chhhhccCCEEEEccCchHHHHHHHhhcccccccEEecCCCCcc
Q 001074 643 ATSINPRLNIEALQNRVG-------PETENVF----DDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAK 711 (1163)
Q Consensus 643 l~~~np~~~I~~~~~~v~-------~~~e~~~----~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sgt~G~~ 711 (1163)
++++||+++|+++...+. ++....+ ..++++++|+||+|+||.++|.++++.|+.+++|+|+++ .|+.
T Consensus 389 L~~iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~aa-lG~~ 467 (615)
T 4gsl_A 389 LKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFD 467 (615)
T ss_dssp HHHHCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTTCEEEEEE-ECSS
T ss_pred HHhhCCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEE-ccce
Confidence 999999999999986651 1100001 146789999999999999999999999999999999976 8999
Q ss_pred cceEEEe-------CCcccccCCC
Q 001074 712 CNTQMVI-------PHLTENYGAS 728 (1163)
Q Consensus 712 G~v~vii-------p~~t~~y~~~ 728 (1163)
|++.++. |..++||.|.
T Consensus 468 Gql~v~~g~~~~~~~~~~~CY~Cl 491 (615)
T 4gsl_A 468 SYLVMRHGNRDEQSSKQLGCYFCH 491 (615)
T ss_dssp EEEEEECCC------CCCCCTTTS
T ss_pred eEEEEeecccccCCCCCCCceeeC
Confidence 9997753 4578999995
No 23
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=99.95 E-value=1.9e-27 Score=266.10 Aligned_cols=147 Identities=17% Similarity=0.304 Sum_probs=114.4
Q ss_pred hhhhhhc--cCH-HHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHH
Q 001074 161 HSRQLAV--YGR-ETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALAS 237 (1163)
Q Consensus 161 YdRQi~l--~G~-e~q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~ 237 (1163)
|+|||.| ||. ++|+||++++|+|||+||+|+++|++|+++|||+|+|+|.|.|+.+||+||| ++++|+|++||+++
T Consensus 16 y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~-~~~~diG~~Ka~aa 94 (292)
T 3h8v_A 16 PRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLF-FQPHQAGLSKVQAA 94 (292)
T ss_dssp ----------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------CCTTSBHHHHH
T ss_pred chHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhccccc-CChhhcCchHHHHH
Confidence 9999999 998 9999999999999999999999999999999999999999999999999997 48899999999999
Q ss_pred HHHHHHhcCCCEEEEeecCCCh-----hhc-----------CCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEeeecc
Q 001074 238 VQKLQELNNAVVLSTLTSKLTK-----EQL-----------SDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRG 301 (1163)
Q Consensus 238 ~~~L~eLNp~V~V~~~~~~l~~-----e~l-----------~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~~~~G 301 (1163)
+++|+++||+|+|+.+...+++ +++ .+||+||+|.|+++.+..+|++|++++ +|||++++.|
T Consensus 95 ~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~--~Pli~~gv~~ 172 (292)
T 3h8v_A 95 EHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELG--QTWMESGVSE 172 (292)
T ss_dssp HHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHT--CCEEEEEECT
T ss_pred HHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhC--CCEEEeeeec
Confidence 9999999999999999988864 233 689999999999999999999999999 9999999986
Q ss_pred --eeEEEEEEc
Q 001074 302 --LFGSVFCDF 310 (1163)
Q Consensus 302 --~~G~vf~d~ 310 (1163)
+.|++.+-.
T Consensus 173 ~~~~Gqv~~~~ 183 (292)
T 3h8v_A 173 NAVSGHIQLII 183 (292)
T ss_dssp TSSEEEEEEEC
T ss_pred ceeEEEEEEEC
Confidence 889887644
No 24
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.94 E-value=2.6e-26 Score=264.57 Aligned_cols=151 Identities=18% Similarity=0.293 Sum_probs=139.6
Q ss_pred chhHhhhhhhhh---ccC--HHH-HHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCc
Q 001074 155 DIDEDLHSRQLA---VYG--RET-MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDND 228 (1163)
Q Consensus 155 ~~d~~rYdRQi~---l~G--~e~-q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~D 228 (1163)
+.+.+||+||+. +|| .++ |++|++++|+|+|+||+|+++|++|+++|||+|+|+|.|.|+.+||+|||+++++|
T Consensus 89 ~~~~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~d 168 (353)
T 3h5n_A 89 STENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDD 168 (353)
T ss_dssp SCTTSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGG
T ss_pred HHHHHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHH
Confidence 445679999976 476 466 99999999999999999999999999999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHhcCCCEEEEeecCCChhh----cCCCcEEEEecCChh-HHHHHHHHHHhcCCCceeEEeeeccee
Q 001074 229 IGKNRALASVQKLQELNNAVVLSTLTSKLTKEQ----LSDFQAVVFTDISLD-KAIEFDDFCHNHQPAISFIKAEVRGLF 303 (1163)
Q Consensus 229 iGk~Kaea~~~~L~eLNp~V~V~~~~~~l~~e~----l~~fdvVI~~~~~~~-~~~~ln~~cr~~~~~IpfI~~~~~G~~ 303 (1163)
+|++||++++++|+++||+|+|+.+...++++. +.+||+||+|.++.. .+..+|++|++++ +|+|++++.|..
T Consensus 169 iG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~~~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~--~p~i~~~~~g~~ 246 (353)
T 3h5n_A 169 VGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRAN--QPYINAGYVNDI 246 (353)
T ss_dssp TTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGGGSCCCSEEEECCCCSTTHHHHHHHHHHHTT--CCEEEEEEETTE
T ss_pred CCChHHHHHHHHHHHHCCCCeEEEeecccCchhhhhHhccCCEEEEecCChHHHHHHHHHHHHHhC--CCEEEEEEeCCE
Confidence 999999999999999999999999998876544 789999999999988 9999999999999 999999999888
Q ss_pred EEEE
Q 001074 304 GSVF 307 (1163)
Q Consensus 304 G~vf 307 (1163)
|++-
T Consensus 247 g~~g 250 (353)
T 3h5n_A 247 AVFG 250 (353)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8763
No 25
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.91 E-value=3.9e-24 Score=242.97 Aligned_cols=150 Identities=16% Similarity=0.215 Sum_probs=137.2
Q ss_pred hhhhhhhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHH
Q 001074 159 DLHSRQLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASV 238 (1163)
Q Consensus 159 ~rYdRQi~l~G~e~q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~ 238 (1163)
++--...|+|+..++++|++++|+|+|+||+|+++|++|+++|||+|+|+|.|.|+.+||+|||+++.+|+|++||++++
T Consensus 15 nl~lm~wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa 94 (340)
T 3rui_A 15 NLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAA 94 (340)
T ss_dssp HHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHH
T ss_pred HHHHHHHhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHH
Confidence 33344557899888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCEEEEeecCC---------------C----hhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEeee
Q 001074 239 QKLQELNNAVVLSTLTSKL---------------T----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEV 299 (1163)
Q Consensus 239 ~~L~eLNp~V~V~~~~~~l---------------~----~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~~~ 299 (1163)
++|+++||.|+++.+...+ + .++++++|+||.|.++.+.+..+|++|+.++ +|+|.+.
T Consensus 95 ~~L~~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~--~plI~aa- 171 (340)
T 3rui_A 95 ASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIEN--KTVINAA- 171 (340)
T ss_dssp HHHHHHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTT--CEEEEEE-
T ss_pred HHHHHhCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcC--CcEEEee-
Confidence 9999999999999988544 1 2467899999999999999999999999999 9999975
Q ss_pred cceeEEEEEEcC
Q 001074 300 RGLFGSVFCDFG 311 (1163)
Q Consensus 300 ~G~~G~vf~d~g 311 (1163)
.|+.|++++..|
T Consensus 172 ~G~~G~l~v~~g 183 (340)
T 3rui_A 172 LGFDSYLVMRHG 183 (340)
T ss_dssp ECSSEEEEEECC
T ss_pred ecceEEEEEeec
Confidence 999999987665
No 26
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.91 E-value=3.2e-24 Score=257.81 Aligned_cols=153 Identities=16% Similarity=0.191 Sum_probs=139.9
Q ss_pred chhHhhhhhhhhc-------cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCC
Q 001074 155 DIDEDLHSRQLAV-------YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDN 227 (1163)
Q Consensus 155 ~~d~~rYdRQi~l-------~G~e~q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~ 227 (1163)
..+-++|+||+++ ||..+|++|++++|+|+|+||+|+++|++|+++|||+|+|+|.|.|+.+||+||++++++
T Consensus 297 ~~~la~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~ 376 (598)
T 3vh1_A 297 PLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFE 376 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCST
T ss_pred HHHHHHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchh
Confidence 4455789999987 667789999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHhcCCCEEEEeecCC---------------C----hhhcCCCcEEEEecCChhHHHHHHHHHHhc
Q 001074 228 DIGKNRALASVQKLQELNNAVVLSTLTSKL---------------T----KEQLSDFQAVVFTDISLDKAIEFDDFCHNH 288 (1163)
Q Consensus 228 DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l---------------~----~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~ 288 (1163)
|||++||++++++|+++||.|+|+.+...+ + +++++++|+||+|.++.+.+..+|++|+.+
T Consensus 377 DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~tR~lin~~c~~~ 456 (598)
T 3vh1_A 377 DCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIE 456 (598)
T ss_dssp TCSSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGGTHHHHHHHHHT
T ss_pred hcCcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999988654 1 246778999999999999999999999999
Q ss_pred CCCceeEEeeecceeEEEEEEc
Q 001074 289 QPAISFIKAEVRGLFGSVFCDF 310 (1163)
Q Consensus 289 ~~~IpfI~~~~~G~~G~vf~d~ 310 (1163)
+ +|+|.+ +.|+.|++++-.
T Consensus 457 ~--~plI~a-a~G~~Gqv~v~~ 475 (598)
T 3vh1_A 457 N--KTVINA-ALGFDSYLVMRH 475 (598)
T ss_dssp T--CEEEEE-EECSSEEEEEEE
T ss_pred C--CCEEEE-EECCccEEEEEc
Confidence 9 999986 789999987643
No 27
>2v31_A Ubiquitin-activating enzyme E1 X; ligase, phosphorylation, catalytic domain, heteronuclear first catalytic cysteine half-domain, E1 protein; NMR {Mus musculus}
Probab=99.91 E-value=3.3e-25 Score=212.36 Aligned_cols=111 Identities=44% Similarity=0.879 Sum_probs=108.5
Q ss_pred EcCCceEEEcCCCCCCcceeecccccCCCceeecccccccccccCCeeEEEeeccccccCCCCCccccccCcceeeeccc
Q 001074 309 DFGPEFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKIKSARPYSFTLEED 388 (1163)
Q Consensus 309 d~g~~f~v~d~~ge~p~~~~I~~I~~~~~~lv~~~d~~rh~~~dgd~V~f~ev~gm~eln~~~~~~i~~~~~~~f~i~~D 388 (1163)
|||++|+|.|.+||+|.+++|++|+++.+++|+++++.||+|+|||+|.|+||+||+++|+++|++|++++||+|+| +|
T Consensus 1 DFG~~F~V~D~dGE~p~~~~I~~Is~~~~g~Vt~~~~~~H~l~dGD~V~FseV~GM~eLN~~~p~~i~v~~p~tf~I-~d 79 (112)
T 2v31_A 1 EFGEEMVLTDSNGEQPLSAMVSMVTKDNPGVVTCLDEARHGFETGDFVSFSEVQGMIQLNGCQPMEIKVLGPYTFSI-CD 79 (112)
T ss_dssp CCSCCCCCCCCCCSSCCEEEEEEECCSSSEEEEECTTCCCCCCTTCEEEECSEESCCTTGGGCCEEEEECSSSEEEE-SC
T ss_pred CCCCCcEEECCCCCccceeeeeeeecCCCcEEEEecCCccCCcCCCEEEEEeeEcchhhCCCcceEEEEcCCCEEEE-ec
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999 69
Q ss_pred cccccceeecceEEEeecCeeecccchHhhhc
Q 001074 389 TTNYGTYVKGGIVTQVKQPKVLNFKPLREALE 420 (1163)
Q Consensus 389 t~~f~~y~~gg~~~qvk~p~~i~fksL~e~L~ 420 (1163)
|+.|++|++||+++|||+|++++|+||+++|.
T Consensus 80 ts~f~~Y~~GG~~tqVK~p~~~~FksL~~~l~ 111 (112)
T 2v31_A 80 TSNFSDYIRGGIVSQVKVPKKISFKSLPASLV 111 (112)
T ss_dssp CTTSCCCCEECEEECCCCCCSCCCCCCSCCSC
T ss_pred ccccccccCCeEEEEEeCCeEEcccCHHHHhh
Confidence 99999999999999999999999999999875
No 28
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.90 E-value=1.4e-23 Score=252.16 Aligned_cols=144 Identities=16% Similarity=0.213 Sum_probs=134.3
Q ss_pred hccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhc
Q 001074 166 AVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN 245 (1163)
Q Consensus 166 ~l~G~e~q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLN 245 (1163)
|+|+..++++|++++|+|||+||+|+++|++|+++|||+|+|+|.|.|+.+||+|||+++.+|+|++||++++++|+++|
T Consensus 314 Rllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iN 393 (615)
T 4gsl_A 314 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF 393 (615)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred hhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhC
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeecCC---------------C----hhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEeeecceeEEE
Q 001074 246 NAVVLSTLTSKL---------------T----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSV 306 (1163)
Q Consensus 246 p~V~V~~~~~~l---------------~----~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~~~~G~~G~v 306 (1163)
|.|+|+.+...+ + ++++.++|+||+|.|+.+.+..+|++|+.++ +|+|.+. .|+.|++
T Consensus 394 P~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~--~PlI~aa-lG~~Gql 470 (615)
T 4gsl_A 394 PLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIEN--KTVINAA-LGFDSYL 470 (615)
T ss_dssp TTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTT--CEEEEEE-ECSSEEE
T ss_pred CCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcC--CeEEEEE-ccceeEE
Confidence 999999987644 1 2467899999999999999999999999999 9999975 9999999
Q ss_pred EEEcCC
Q 001074 307 FCDFGP 312 (1163)
Q Consensus 307 f~d~g~ 312 (1163)
.+..|.
T Consensus 471 ~v~~g~ 476 (615)
T 4gsl_A 471 VMRHGN 476 (615)
T ss_dssp EEECCC
T ss_pred EEeecc
Confidence 876653
No 29
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=98.39 E-value=7.4e-07 Score=98.71 Aligned_cols=55 Identities=33% Similarity=0.460 Sum_probs=42.7
Q ss_pred HHHHHHHHhhcCCccccccCCCCCccCCCCCCCccccCCCCCc--chhHHHHHHHHHHHHcCCCCC
Q 001074 826 FSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPS--HLHFVMAASILRAETFGIPIP 889 (1163)
Q Consensus 826 F~~~I~~Ll~~~p~d~~t~~g~~fWs~~kr~P~pl~fd~~~~~--h~~fi~~~a~l~a~~~~i~~~ 889 (1163)
|.+.+++|+..+|..... . .....|+.|+.+|.. |++||.+||||||.+|||+..
T Consensus 207 ~~~~~~~L~~~l~~~~~~-------~--~~~~~pl~FeKDDd~N~hmdFItAaSNLRA~nY~I~~~ 263 (276)
T 1z7l_A 207 DDSRLEELKATLPSPDKL-------P--GFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPA 263 (276)
T ss_dssp CSHHHHHHHHHSCCGGGS-------T--TCCCCCCCCCSSCTTSSHHHHHHHHHHHHHHHTTCCCC
T ss_pred cHHHHHHHHHHhhhhhhc-------c--cccCCCcceecCCCcccHHHHHHHHHHHHHHHcCCCcC
Confidence 456778888777653211 1 123569999999999 999999999999999999875
No 30
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.25 E-value=0.00075 Score=72.61 Aligned_cols=97 Identities=13% Similarity=0.106 Sum_probs=72.6
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
.|++.+|+|||.|.+|...++.|..+|. .+++++++... . .+.|.+ .-.+....
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~------------------~----l~~l~~---~~~i~~i~ 81 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSA------------------E----INEWEA---KGQLRVKR 81 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCH------------------H----HHHHHH---TTSCEEEC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCH------------------H----HHHHHH---cCCcEEEE
Confidence 4788999999999999999999999997 79999874210 1 112222 22355667
Q ss_pred cCCChhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEeeec
Q 001074 255 SKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVR 300 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~~~~ 300 (1163)
..+.++.+.++|+||.++++.+....+.+.|+ .+ ||+-.++.-
T Consensus 82 ~~~~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~g--i~VNvvD~p 124 (223)
T 3dfz_A 82 KKVGEEDLLNVFFIVVATNDQAVNKFVKQHIK-ND--QLVNMASSF 124 (223)
T ss_dssp SCCCGGGSSSCSEEEECCCCTHHHHHHHHHSC-TT--CEEEC----
T ss_pred CCCCHhHhCCCCEEEECCCCHHHHHHHHHHHh-CC--CEEEEeCCc
Confidence 77788889999999999998888888999998 88 776655543
No 31
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.93 E-value=0.001 Score=74.18 Aligned_cols=79 Identities=20% Similarity=0.273 Sum_probs=63.0
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
.+++++++|+|+||+|..++..|+..|+ ++|+|++.+ ..|++.+++.+....|.++
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~-----~~v~i~~R~-------------------~~~a~~la~~~~~~~~~~~ 179 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGV-----QKLQVADLD-------------------TSRAQALADVINNAVGREA 179 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSS-------------------HHHHHHHHHHHHHHHTSCC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEECC-------------------HHHHHHHHHHHHhhcCCce
Confidence 4678999999999999999999999999 889998654 3588888898888888777
Q ss_pred EEEEeccCCcccccccchhhhccCCEEEEcc
Q 001074 652 IEALQNRVGPETENVFDDTFWENITCVINAL 682 (1163)
Q Consensus 652 I~~~~~~v~~~~e~~~~~~f~~~~DvVi~al 682 (1163)
+.++.. . .+ .+...++|+||||+
T Consensus 180 i~~~~~--~----~l--~~~l~~~DiVInaT 202 (283)
T 3jyo_A 180 VVGVDA--R----GI--EDVIAAADGVVNAT 202 (283)
T ss_dssp EEEECS--T----TH--HHHHHHSSEEEECS
T ss_pred EEEcCH--H----HH--HHHHhcCCEEEECC
Confidence 766541 1 11 23457899999997
No 32
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.79 E-value=0.0019 Score=72.03 Aligned_cols=79 Identities=16% Similarity=0.244 Sum_probs=62.0
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
.+++++|+|+|+||+|..++..|+..|+++|+|++.+ ..|++.+++.+....|.+.+....
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~-------------------~~~a~~la~~~~~~~~~~~i~~~~ 184 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD-------------------TSRAQALADVINNAVGREAVVGVD 184 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS-------------------HHHHHHHHHHHHHHHTSCCEEEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC-------------------HHHHHHHHHHHHhhcCCceEEEcC
Confidence 4678999999999999999999999999999999753 248889999998888877776654
Q ss_pred cCCChhhcCCCcEEEEec
Q 001074 255 SKLTKEQLSDFQAVVFTD 272 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~ 272 (1163)
.+--++.+.++|+||.|+
T Consensus 185 ~~~l~~~l~~~DiVInaT 202 (283)
T 3jyo_A 185 ARGIEDVIAAADGVVNAT 202 (283)
T ss_dssp STTHHHHHHHSSEEEECS
T ss_pred HHHHHHHHhcCCEEEECC
Confidence 211123456778887765
No 33
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.78 E-value=0.0021 Score=69.13 Aligned_cols=92 Identities=14% Similarity=0.226 Sum_probs=67.9
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
.|++++|+|||+|.+|...++.|...|. +++|+|++.- + . +.+.+. ...
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA------~VtVvap~~~------------~------~---l~~l~~--~~~-- 76 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA------AITVVAPTVS------------A------E---INEWEA--KGQ-- 76 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC------CEEEECSSCC------------H------H---HHHHHH--TTS--
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC------EEEEECCCCC------------H------H---HHHHHH--cCC--
Confidence 5789999999999999999999999997 9999987421 0 1 111111 122
Q ss_pred EEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEE
Q 001074 652 IEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLL 703 (1163)
Q Consensus 652 I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI 703 (1163)
|+.+... |.++.+.++|+||.|+|+.+.-..+...|. .++|+-
T Consensus 77 i~~i~~~--------~~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~VN 119 (223)
T 3dfz_A 77 LRVKRKK--------VGEEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLVN 119 (223)
T ss_dssp CEEECSC--------CCGGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEEE
T ss_pred cEEEECC--------CCHhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEEE
Confidence 3333332 234556899999999999999999999998 888843
No 34
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.74 E-value=0.003 Score=59.27 Aligned_cols=96 Identities=15% Similarity=0.117 Sum_probs=63.5
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
..+|+|+|+|++|..+++.|+..|. -+++++|.+. .|.+.+. .+.+. .
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~-----~~v~~~~r~~-------------------~~~~~~~------~~~~~--~ 52 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSN-----YSVTVADHDL-------------------AALAVLN------RMGVA--T 52 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSS-----EEEEEEESCH-------------------HHHHHHH------TTTCE--E
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCCH-------------------HHHHHHH------hCCCc--E
Confidence 4689999999999999999999995 4888887541 1222221 23333 3
Q ss_pred EeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecC
Q 001074 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESG 706 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sg 706 (1163)
+...+... +.+ .+.++++|+||+|+... ....+...|...+++.++.+
T Consensus 53 ~~~d~~~~-~~~--~~~~~~~d~vi~~~~~~-~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 53 KQVDAKDE-AGL--AKALGGFDAVISAAPFF-LTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp EECCTTCH-HHH--HHHTTTCSEEEECSCGG-GHHHHHHHHHHTTCEEECCC
T ss_pred EEecCCCH-HHH--HHHHcCCCEEEECCCch-hhHHHHHHHHHhCCCEEEec
Confidence 33333321 111 34567999999999544 34566678888899888643
No 35
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.65 E-value=0.0057 Score=67.72 Aligned_cols=119 Identities=15% Similarity=0.193 Sum_probs=76.1
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcc--cCCcccccCCCccCchHHHHHHHHHHH-hc-----C
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELW--DLSSNFVFSDNDIGKNRALASVQKLQE-LN-----N 246 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~s--DL~rqff~~~~DiGk~Kaea~~~~L~e-LN-----p 246 (1163)
.|++.+|+|||+|.+|..-++.|..+|. +|+++|++....- .+. . +....| . ++. ....+. +| .
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga-~VtViap~~~~~l~~~~~-~-l~~~~~--~-~~~--~~~~~~~~~~~~~~~ 81 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHKSIIPKFG-K-FIQNKD--Q-PDY--REDAKRFINPNWDPT 81 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECTTHHHHHC-G-GGC----------------CEEECTTCCTT
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC-EEEEEcCCCCcchhHHHH-H-HHhccc--c-ccc--cchhhcccccccccc
Confidence 4678999999999999999999999996 7999997553110 000 0 000000 0 000 000000 00 1
Q ss_pred CCEE-EEeecCCChhhcC------CCcEEEEecCChhHHHHHHHHHHhc---CCCceeEEeeeccee
Q 001074 247 AVVL-STLTSKLTKEQLS------DFQAVVFTDISLDKAIEFDDFCHNH---QPAISFIKAEVRGLF 303 (1163)
Q Consensus 247 ~V~V-~~~~~~l~~e~l~------~fdvVI~~~~~~~~~~~ln~~cr~~---~~~IpfI~~~~~G~~ 303 (1163)
.-.+ ......+.++.+. ++|+||.++++.+....+.+.|++. + +|+-.++---+.
T Consensus 82 ~g~i~~~i~~~~~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~--i~VNvvd~pel~ 146 (274)
T 1kyq_A 82 KNEIYEYIRSDFKDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQ--QLVNVADKPDLC 146 (274)
T ss_dssp SCCCSEEECSSCCGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTT--SEEEETTCGGGB
T ss_pred cCCeeEEEcCCCCHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCC--cEEEECCCcccC
Confidence 1234 5666677777777 8999999999888888999999998 8 777555544433
No 36
>1y8x_B Ubiquitin-activating enzyme E1C; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: c.111.1.2 PDB: 3fn1_A
Probab=96.62 E-value=0.0008 Score=63.01 Aligned_cols=53 Identities=15% Similarity=0.346 Sum_probs=45.5
Q ss_pred EEcCCCCcHHHHHHHHHHc---CCceeeeecC----CceeecCCCc----chhhcccCcHHHHH
Q 001074 1072 WILKDNPTLRELIQWLKDK---GLNAYSISCG----SCLLFNSMFP----RHKERMDKKVVDLA 1124 (1163)
Q Consensus 1072 ~~v~~~~TL~eli~~~~~k---~l~~~~I~~g----~~llY~~~~~----~~~~~l~~~l~~l~ 1124 (1163)
++++.+.||++|||.+.++ .+..++|+.+ .+.||....| .++.||+|+|.||.
T Consensus 9 l~v~~~~TL~~lid~L~~~p~~qlk~PSltt~~~~~~k~LYmq~pp~Lee~Tr~NL~k~l~eLg 72 (98)
T 1y8x_B 9 IQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYMQSVTSIEERTRPNLSKTLKELG 72 (98)
T ss_dssp EECCTTCBHHHHHHHHHHCTTCCCSSCEEEEEETTEEEEEECSSCHHHHHHHHHHHHSBSGGGT
T ss_pred EEECCchhHHHHHHHHHhChHhhccCCeeeeecCCCCCeEEEeCcHHHHHHhHhhhhCCHHHhC
Confidence 5677788999999999996 8889999888 8999988755 45789999999993
No 37
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.49 E-value=0.013 Score=69.53 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=75.8
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
.|++.+|+|+|.|.+|...++.|..+|. +++++|++... .++++-..-.++...
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga-~V~vi~~~~~~-------------------------~~~~l~~~~~i~~~~ 62 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIP-------------------------QFTVWANEGMLTLVE 62 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCH-------------------------HHHHHHTTTSCEEEE
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEcCCCCH-------------------------HHHHHHhcCCEEEEE
Confidence 3678999999999999999999999996 79999974211 122222222456666
Q ss_pred cCCChhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEeeecce
Q 001074 255 SKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGL 302 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~~~~G~ 302 (1163)
..+.++.+.++|+||.+++..+....+.+.|++.+ ||+-.++--.+
T Consensus 63 ~~~~~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~--i~vn~~d~~e~ 108 (457)
T 1pjq_A 63 GPFDETLLDSCWLAIAATDDDTVNQRVSDAAESRR--IFCNVVDAPKA 108 (457)
T ss_dssp SSCCGGGGTTCSEEEECCSCHHHHHHHHHHHHHTT--CEEEETTCTTS
T ss_pred CCCCccccCCccEEEEcCCCHHHHHHHHHHHHHcC--CEEEECCCccc
Confidence 77788888999999999988877888999999999 88644444433
No 38
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.13 E-value=0.045 Score=53.43 Aligned_cols=92 Identities=15% Similarity=0.159 Sum_probs=62.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~ 255 (1163)
+...+|+|+|+|.+|..+++.|...|. .++++|.+. .++ +.+.+. .+ .....
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~-------------------~~~----~~~~~~--~~--~~~~g 55 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSK-------------------EKI----ELLEDE--GF--DAVIA 55 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHH----HHHHHT--TC--EEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH-------------------HHH----HHHHHC--CC--cEEEC
Confidence 445789999999999999999999997 788988632 122 222222 22 23333
Q ss_pred CCC-hhh-----cCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEe
Q 001074 256 KLT-KEQ-----LSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKA 297 (1163)
Q Consensus 256 ~l~-~e~-----l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~ 297 (1163)
+.+ ++. +.++|+||.+..+.+....+...+++.+ .+.|.+
T Consensus 56 d~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~--~~~iia 101 (141)
T 3llv_A 56 DPTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVS--DVYAIV 101 (141)
T ss_dssp CTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHC--CCCEEE
T ss_pred CCCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhC--CceEEE
Confidence 332 222 4578999999888777777888888887 444443
No 39
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.11 E-value=0.027 Score=52.57 Aligned_cols=89 Identities=20% Similarity=0.163 Sum_probs=61.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l 257 (1163)
..+|+|+|+|++|..+++.|...|..+++++|.+. .+++. +. .+.+.+ ...++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~-------------------~~~~~----~~--~~~~~~--~~~d~ 57 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL-------------------AALAV----LN--RMGVAT--KQVDA 57 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH-------------------HHHHH----HH--TTTCEE--EECCT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH-------------------HHHHH----HH--hCCCcE--EEecC
Confidence 45899999999999999999999977899988531 12222 21 233333 22333
Q ss_pred Ch-----hhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEE
Q 001074 258 TK-----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 296 (1163)
Q Consensus 258 ~~-----e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~ 296 (1163)
.+ +.+.++|+||.+. +......+.+.|.+.+ ++++.
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~-~~~~~~~~~~~~~~~g--~~~~~ 98 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAA-PFFLTPIIAKAAKAAG--AHYFD 98 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECS-CGGGHHHHHHHHHHTT--CEEEC
T ss_pred CCHHHHHHHHcCCCEEEECC-CchhhHHHHHHHHHhC--CCEEE
Confidence 21 3567899999887 4445577888899988 76663
No 40
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.82 E-value=0.013 Score=66.30 Aligned_cols=84 Identities=17% Similarity=0.143 Sum_probs=59.0
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
.+++++++|+|+||+|..++..|+..|+ .+|+|++.+. --..|++.+++.+....+ +.
T Consensus 151 ~l~gk~~lVlGaGG~g~aia~~L~~~Ga-----~~V~i~nR~~----------------~~~~~a~~la~~~~~~~~-~~ 208 (315)
T 3tnl_A 151 DIIGKKMTICGAGGAATAICIQAALDGV-----KEISIFNRKD----------------DFYANAEKTVEKINSKTD-CK 208 (315)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTC-----SEEEEEECSS----------------TTHHHHHHHHHHHHHHSS-CE
T ss_pred CccCCEEEEECCChHHHHHHHHHHHCCC-----CEEEEEECCC----------------chHHHHHHHHHHhhhhcC-Cc
Confidence 3678999999999999999999999999 8999986431 002478888888776554 44
Q ss_pred EEEEeccCCcccccccchhhhccCCEEEEcc
Q 001074 652 IEALQNRVGPETENVFDDTFWENITCVINAL 682 (1163)
Q Consensus 652 I~~~~~~v~~~~e~~~~~~f~~~~DvVi~al 682 (1163)
+.+.. +.+ .+.+ .+...++|+||||+
T Consensus 209 ~~~~~--~~~-~~~l--~~~l~~aDiIINaT 234 (315)
T 3tnl_A 209 AQLFD--IED-HEQL--RKEIAESVIFTNAT 234 (315)
T ss_dssp EEEEE--TTC-HHHH--HHHHHTCSEEEECS
T ss_pred eEEec--cch-HHHH--HhhhcCCCEEEECc
Confidence 54442 111 0111 23456899999997
No 41
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.81 E-value=0.043 Score=53.00 Aligned_cols=89 Identities=15% Similarity=0.137 Sum_probs=55.7
Q ss_pred HHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEe
Q 001074 174 RRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 253 (1163)
Q Consensus 174 ~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~ 253 (1163)
.++...+|+|+|+|++|..+++.|...|. +++++|.+.-....+. +. ... ..
T Consensus 2 ~~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~-----------------------~~--~~~--~~ 53 (144)
T 2hmt_A 2 GRIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYA-----------------------SY--ATH--AV 53 (144)
T ss_dssp ----CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTT-----------------------TT--CSE--EE
T ss_pred CCCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH-----------------------Hh--CCE--EE
Confidence 45667899999999999999999999997 6888886432111111 11 111 11
Q ss_pred ecCC-Chh-----hcCCCcEEEEecCCh-hHHHHHHHHHHhcCC
Q 001074 254 TSKL-TKE-----QLSDFQAVVFTDISL-DKAIEFDDFCHNHQP 290 (1163)
Q Consensus 254 ~~~l-~~e-----~l~~fdvVI~~~~~~-~~~~~ln~~cr~~~~ 290 (1163)
..+. +.+ .+.++|+||.+..+. .....+...+++.++
T Consensus 54 ~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~ 97 (144)
T 2hmt_A 54 IANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDI 97 (144)
T ss_dssp ECCTTCHHHHHTTTGGGCSEEEECCCSCHHHHHHHHHHHHHTTC
T ss_pred EeCCCCHHHHHhcCCCCCCEEEECCCCchHHHHHHHHHHHHcCC
Confidence 1111 111 245789999988753 555677788888883
No 42
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.75 E-value=0.025 Score=55.25 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=60.3
Q ss_pred hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEE
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~ 653 (1163)
...+|+|+|+|.+|..+++.|+..|. +++++|.|. .+.+.+ .+. .. .
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~------~V~~id~~~-------------------~~~~~~----~~~--~~--~ 51 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGK------KVLAVDKSK-------------------EKIELL----EDE--GF--D 51 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC------CEEEEESCH-------------------HHHHHH----HHT--TC--E
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC------eEEEEECCH-------------------HHHHHH----HHC--CC--c
Confidence 45789999999999999999999997 899998652 122222 221 22 2
Q ss_pred EEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhccccccc
Q 001074 654 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKP 701 (1163)
Q Consensus 654 ~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~P 701 (1163)
.+....... ..+...-..++|+||.++++.+....+...+...+.+
T Consensus 52 ~~~gd~~~~--~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~ 97 (141)
T 3llv_A 52 AVIADPTDE--SFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDV 97 (141)
T ss_dssp EEECCTTCH--HHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCC
T ss_pred EEECCCCCH--HHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCc
Confidence 333333321 1111112468999999999888887777777665433
No 43
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.69 E-value=0.025 Score=56.48 Aligned_cols=93 Identities=15% Similarity=0.229 Sum_probs=57.4
Q ss_pred HHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 571 KKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 571 ~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
+++.+.+|+|+|+|.+|..+++.|...|. +++++|.+.-....+.++. ..
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~------~V~vid~~~~~~~~~~~~~------------------------g~ 64 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH------SVVVVDKNEYAFHRLNSEF------------------------SG 64 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESCGGGGGGSCTTC------------------------CS
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC------eEEEEECCHHHHHHHHhcC------------------------CC
Confidence 45667899999999999999999999997 8999987643222221010 11
Q ss_pred eEEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhccc
Q 001074 651 NIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLY 697 (1163)
Q Consensus 651 ~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~ 697 (1163)
. .+...... ...+...-..++|+||.|+.+......+...+..
T Consensus 65 ~--~~~~d~~~--~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~ 107 (155)
T 2g1u_A 65 F--TVVGDAAE--FETLKECGMEKADMVFAFTNDDSTNFFISMNARY 107 (155)
T ss_dssp E--EEESCTTS--HHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHH
T ss_pred c--EEEecCCC--HHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHH
Confidence 1 11111110 0001111146799999999998877776666554
No 44
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.68 E-value=0.059 Score=53.74 Aligned_cols=93 Identities=17% Similarity=0.118 Sum_probs=58.5
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCccccc--CCCccCchHHHHHHHHHHHhcCCCEE
Q 001074 173 MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVF--SDNDIGKNRALASVQKLQELNNAVVL 250 (1163)
Q Consensus 173 q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~--~~~DiGk~Kaea~~~~L~eLNp~V~V 250 (1163)
-+++.+.+|+|+|+|.+|..+++.|...|. .++++|.+.-....+...+-. -..|... . +.|.
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~~d~~~--~----~~l~-------- 78 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVVGDAAE--F----ETLK-------- 78 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEESCTTS--H----HHHH--------
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEEecCCC--H----HHHH--------
Confidence 356677899999999999999999999997 899999764333222201000 0001000 0 0111
Q ss_pred EEeecCCChhhcCCCcEEEEecCChhHHHHHHHHHHhc
Q 001074 251 STLTSKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNH 288 (1163)
Q Consensus 251 ~~~~~~l~~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~ 288 (1163)
...+.++|+||.|..+......+...++..
T Consensus 79 --------~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~ 108 (155)
T 2g1u_A 79 --------ECGMEKADMVFAFTNDDSTNFFISMNARYM 108 (155)
T ss_dssp --------TTTGGGCSEEEECSSCHHHHHHHHHHHHHT
T ss_pred --------HcCcccCCEEEEEeCCcHHHHHHHHHHHHH
Confidence 112457899999998877777777788873
No 45
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.67 E-value=0.017 Score=63.77 Aligned_cols=73 Identities=19% Similarity=0.289 Sum_probs=57.6
Q ss_pred HhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeE
Q 001074 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (1163)
Q Consensus 573 L~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I 652 (1163)
+++++++|+|+||.+..++-.|+..|+ .+|+|++.+ ..|++.+++.+....+...+
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~-----~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~ 178 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGI-----ASITLCDPS-------------------TARMGAVCELLGNGFPGLTV 178 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEE
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCC-----CeEEEeCCC-------------------HHHHHHHHHHHhccCCccee
Confidence 467899999999999999999999999 899998532 34888899999888877654
Q ss_pred EEEeccCCcccccccchhhhccCCEEEEcc
Q 001074 653 EALQNRVGPETENVFDDTFWENITCVINAL 682 (1163)
Q Consensus 653 ~~~~~~v~~~~e~~~~~~f~~~~DvVi~al 682 (1163)
.... .-.+++|+||||+
T Consensus 179 ~~~~-------------~~~~~~dliiNaT 195 (269)
T 3tum_A 179 STQF-------------SGLEDFDLVANAS 195 (269)
T ss_dssp ESCC-------------SCSTTCSEEEECS
T ss_pred hhhh-------------hhhhcccccccCC
Confidence 3211 1135789999997
No 46
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.54 E-value=0.026 Score=63.69 Aligned_cols=80 Identities=15% Similarity=0.223 Sum_probs=55.0
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~ 255 (1163)
+++++|+|+|+||.|..++..|...|+++|+|++.+.- ...||+.+++.+.+..+ ..+.....
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~----------------~~~~a~~la~~~~~~~~-~~v~~~~~ 208 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDD----------------FFEKAVAFAKRVNENTD-CVVTVTDL 208 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST----------------HHHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCc----------------hHHHHHHHHHHhhhccC-cceEEech
Confidence 67899999999999999999999999999999875310 02478888888776543 33333321
Q ss_pred C-C--ChhhcCCCcEEEEec
Q 001074 256 K-L--TKEQLSDFQAVVFTD 272 (1163)
Q Consensus 256 ~-l--~~e~l~~fdvVI~~~ 272 (1163)
. + ..+.+.++|+||.|+
T Consensus 209 ~~l~~~~~~l~~~DiIINaT 228 (312)
T 3t4e_A 209 ADQHAFTEALASADILTNGT 228 (312)
T ss_dssp TCHHHHHHHHHHCSEEEECS
T ss_pred HhhhhhHhhccCceEEEECC
Confidence 1 1 023345667776655
No 47
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.51 E-value=0.032 Score=62.99 Aligned_cols=80 Identities=13% Similarity=0.215 Sum_probs=56.4
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~ 255 (1163)
+++++|+|+|+||+|..++..|+..|+++|+|++.+.- -..||+.+++.+.+..+ +.+....-
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~----------------~~~~a~~la~~~~~~~~-~~~~~~~~ 214 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDD----------------FYANAEKTVEKINSKTD-CKAQLFDI 214 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST----------------THHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCc----------------hHHHHHHHHHHhhhhcC-CceEEecc
Confidence 67899999999999999999999999999999975310 02478888888876544 44444321
Q ss_pred C-CC--hhhcCCCcEEEEec
Q 001074 256 K-LT--KEQLSDFQAVVFTD 272 (1163)
Q Consensus 256 ~-l~--~e~l~~fdvVI~~~ 272 (1163)
+ .+ .+.+.++|+||.|+
T Consensus 215 ~~~~~l~~~l~~aDiIINaT 234 (315)
T 3tnl_A 215 EDHEQLRKEIAESVIFTNAT 234 (315)
T ss_dssp TCHHHHHHHHHTCSEEEECS
T ss_pred chHHHHHhhhcCCCEEEECc
Confidence 1 11 12345677777665
No 48
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.49 E-value=0.024 Score=63.87 Aligned_cols=84 Identities=10% Similarity=0.120 Sum_probs=57.7
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
.+++++++|+|+||.|..++..|+..|+ .+|+|++.+. -...|++.+++.+....+ ..
T Consensus 145 ~l~gk~~lVlGAGGaaraia~~L~~~G~-----~~v~v~nRt~----------------~~~~~a~~la~~~~~~~~-~~ 202 (312)
T 3t4e_A 145 DMRGKTMVLLGAGGAATAIGAQAAIEGI-----KEIKLFNRKD----------------DFFEKAVAFAKRVNENTD-CV 202 (312)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-----SEEEEEECSS----------------THHHHHHHHHHHHHHHSS-CE
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHcCC-----CEEEEEECCC----------------chHHHHHHHHHHhhhccC-cc
Confidence 3678999999999999999999999999 8999985431 012478888887776543 34
Q ss_pred EEEEeccCCcccccccchhhhccCCEEEEcc
Q 001074 652 IEALQNRVGPETENVFDDTFWENITCVINAL 682 (1163)
Q Consensus 652 I~~~~~~v~~~~e~~~~~~f~~~~DvVi~al 682 (1163)
+..+.. .+ .+. + .+...++|+||||+
T Consensus 203 v~~~~~--~~-l~~-~-~~~l~~~DiIINaT 228 (312)
T 3t4e_A 203 VTVTDL--AD-QHA-F-TEALASADILTNGT 228 (312)
T ss_dssp EEEEET--TC-HHH-H-HHHHHHCSEEEECS
T ss_pred eEEech--Hh-hhh-h-HhhccCceEEEECC
Confidence 444321 10 000 0 23356899999997
No 49
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.48 E-value=0.02 Score=55.49 Aligned_cols=37 Identities=19% Similarity=0.434 Sum_probs=30.6
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
++...+|+|+|+|.+|..+++.|...|. +++++|.+.
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~------~v~~~d~~~ 39 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGH------EVLAVDINE 39 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTC------CCEEEESCH
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCC------EEEEEeCCH
Confidence 4567799999999999999999999997 788888653
No 50
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.44 E-value=0.028 Score=65.53 Aligned_cols=103 Identities=18% Similarity=0.223 Sum_probs=69.5
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~~ 655 (1163)
+||+|+|||++|..+++.|+..|-. ...++++|.+ ..|++.+++.+....+ .++..+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~---~~~V~v~~r~-------------------~~~~~~la~~l~~~~~-~~~~~~ 58 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREV---FSHITLASRT-------------------LSKCQEIAQSIKAKGY-GEIDIT 58 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTT---CCEEEEEESC-------------------HHHHHHHHHHHHHTTC-CCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC---ceEEEEEECC-------------------HHHHHHHHHHhhhhcC-CceEEE
Confidence 4899999999999999999998720 0277887643 2466666766654331 234444
Q ss_pred eccCCcccccccchhhhcc--CCEEEEccCchHHHHHHHhhcccccccEEec
Q 001074 656 QNRVGPETENVFDDTFWEN--ITCVINALDNVNARLYVDQRCLYFQKPLLES 705 (1163)
Q Consensus 656 ~~~v~~~~e~~~~~~f~~~--~DvVi~alDn~~aR~~v~~~c~~~~~PlI~s 705 (1163)
...+... +.+ .+.+++ +|+||+|+.... ...+...|...++.+++.
T Consensus 59 ~~D~~d~-~~l--~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 59 TVDADSI-EEL--VALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp ECCTTCH-HHH--HHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEEES
T ss_pred EecCCCH-HHH--HHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEEEe
Confidence 4444421 111 344555 899999987654 456777999999999974
No 51
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.39 E-value=0.036 Score=61.16 Aligned_cols=73 Identities=32% Similarity=0.322 Sum_probs=59.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~ 255 (1163)
++.++|+|+|+||.+..++.-|...|+++|+|++.+ ..|++.+++.+....+...+....
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~~~~~- 182 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPS-------------------TARMGAVCELLGNGFPGLTVSTQF- 182 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEEESCC-
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC-------------------HHHHHHHHHHHhccCCcceehhhh-
Confidence 467899999999999999999999999999998742 248999999999888876654322
Q ss_pred CCChhhcCCCcEEEEec
Q 001074 256 KLTKEQLSDFQAVVFTD 272 (1163)
Q Consensus 256 ~l~~e~l~~fdvVI~~~ 272 (1163)
+.+.++|+||-|+
T Consensus 183 ----~~~~~~dliiNaT 195 (269)
T 3tum_A 183 ----SGLEDFDLVANAS 195 (269)
T ss_dssp ----SCSTTCSEEEECS
T ss_pred ----hhhhcccccccCC
Confidence 2345789998876
No 52
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.34 E-value=0.018 Score=63.69 Aligned_cols=111 Identities=20% Similarity=0.335 Sum_probs=67.8
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCc--ccCcccCcccchHHHHHHHHHHh-hCC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSR--QFLFRDWNIGQAKSTVAASAATS-INP 648 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnR--QfLf~~~dIG~~Ka~vaa~~l~~-~np 648 (1163)
.|++++|+|||+|.+|...++.|...|. +++|+|.+.-+. +.. +-+.. +-+. ++. .....+ +++
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga------~VtViap~~~~~--l~~~~~~l~~--~~~~-~~~--~~~~~~~~~~ 76 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC------KLTLVSPDLHKS--IIPKFGKFIQ--NKDQ-PDY--REDAKRFINP 76 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC------EEEEEEEEECTT--HHHHHCGGGC----------------CEEECT
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC------EEEEEcCCCCcc--hhHHHHHHHh--cccc-ccc--cchhhccccc
Confidence 4678999999999999999999999997 899999765211 100 00000 0000 000 000000 111
Q ss_pred C-----CeE-EEEeccCCcccccccchhhhc------cCCEEEEccCchHHHHHHHhhcccc---cccEE
Q 001074 649 R-----LNI-EALQNRVGPETENVFDDTFWE------NITCVINALDNVNARLYVDQRCLYF---QKPLL 703 (1163)
Q Consensus 649 ~-----~~I-~~~~~~v~~~~e~~~~~~f~~------~~DvVi~alDn~~aR~~v~~~c~~~---~~PlI 703 (1163)
. -.| +.+...+ .++.+. ++|+||.|+|+.+.-..+...|... ++|+-
T Consensus 77 ~~~~~~g~i~~~i~~~~--------~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VN 138 (274)
T 1kyq_A 77 NWDPTKNEIYEYIRSDF--------KDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVN 138 (274)
T ss_dssp TCCTTSCCCSEEECSSC--------CGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEE
T ss_pred ccccccCCeeEEEcCCC--------CHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEE
Confidence 1 123 3333322 233344 8999999999998889999999998 77773
No 53
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.13 E-value=0.03 Score=59.44 Aligned_cols=101 Identities=11% Similarity=0.113 Sum_probs=59.9
Q ss_pred HHHHHhcCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhC
Q 001074 569 LQKKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSIN 647 (1163)
Q Consensus 569 ~q~kL~~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~n 647 (1163)
...++++++|+|.|+ |+||.++++.|+..|. ++++++.+.- +.+.+. .
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~------~V~~~~R~~~-------------------~~~~~~----~-- 63 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGH------EPVAMVRNEE-------------------QGPELR----E-- 63 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESSGG-------------------GHHHHH----H--
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCC------eEEEEECChH-------------------HHHHHH----h--
Confidence 346788999999997 9999999999999997 7888874321 111111 1
Q ss_pred CCCeE-EEEeccCCcccccccchhhhccCCEEEEccC-------------chHHHHHHHhhcccccc-cEEecCC
Q 001074 648 PRLNI-EALQNRVGPETENVFDDTFWENITCVINALD-------------NVNARLYVDQRCLYFQK-PLLESGT 707 (1163)
Q Consensus 648 p~~~I-~~~~~~v~~~~e~~~~~~f~~~~DvVi~alD-------------n~~aR~~v~~~c~~~~~-PlI~sgt 707 (1163)
+ .+ +.+...+. +.+ .+.+.++|+||++.. |+.+-..+-+.|...+. .+|..++
T Consensus 64 ~--~~~~~~~~Dl~---~~~--~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 64 R--GASDIVVANLE---EDF--SHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp T--TCSEEEECCTT---SCC--GGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred C--CCceEEEcccH---HHH--HHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 1 23 44555555 222 345679999999875 33334455556655543 3444444
No 54
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.08 E-value=0.12 Score=51.32 Aligned_cols=89 Identities=10% Similarity=0.024 Sum_probs=61.4
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhc-CCCEEEEee
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN-NAVVLSTLT 254 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLN-p~V~V~~~~ 254 (1163)
|.+.+|+|+|+|.+|..+++.|...|. .++++|.+.- .+++ .+.+.. ..+.+ ..
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~------------------~~~~----~~~~~~~~~~~~--i~ 55 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPE------------------DDIK----QLEQRLGDNADV--IP 55 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCH------------------HHHH----HHHHHHCTTCEE--EE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCCh------------------HHHH----HHHHhhcCCCeE--EE
Confidence 346789999999999999999999996 7889886310 1222 222222 23333 33
Q ss_pred cCCC-h-----hhcCCCcEEEEecCChhHHHHHHHHHHhcC
Q 001074 255 SKLT-K-----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQ 289 (1163)
Q Consensus 255 ~~l~-~-----e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~ 289 (1163)
.+.+ + ..+.++|+||++..+.+....+...+++.+
T Consensus 56 gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~ 96 (153)
T 1id1_A 56 GDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMS 96 (153)
T ss_dssp SCTTSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHHC
Confidence 3332 2 236789999999988777788888888875
No 55
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.06 E-value=0.039 Score=65.49 Aligned_cols=92 Identities=18% Similarity=0.172 Sum_probs=67.9
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
.+++++|+|||.|.+|...++.|...|. +++|+|.+.-+ .+.+... .. .
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga------~V~vi~~~~~~---------------------~~~~l~~--~~--~ 57 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGA------RLTVNALTFIP---------------------QFTVWAN--EG--M 57 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTB------EEEEEESSCCH---------------------HHHHHHT--TT--S
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcC------EEEEEcCCCCH---------------------HHHHHHh--cC--C
Confidence 4678999999999999999999999997 89999974211 0111111 11 2
Q ss_pred EEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccE
Q 001074 652 IEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPL 702 (1163)
Q Consensus 652 I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~Pl 702 (1163)
|+.+...+ .+..+.++|+||.|+|+.+....+-..|...++|+
T Consensus 58 i~~~~~~~--------~~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 58 LTLVEGPF--------DETLLDSCWLAIAATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp CEEEESSC--------CGGGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEE
T ss_pred EEEEECCC--------CccccCCccEEEEcCCCHHHHHHHHHHHHHcCCEE
Confidence 34444333 23456789999999999988888999999999996
No 56
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.89 E-value=0.11 Score=49.99 Aligned_cols=84 Identities=13% Similarity=0.109 Sum_probs=55.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCC-
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL- 257 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l- 257 (1163)
.+|+|+|+|.+|..+++.|...|. +++++|.+.- +++ .+.+.. .+. ....+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~-------------------~~~----~~~~~~-~~~--~~~~d~~ 57 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKD-------------------ICK----KASAEI-DAL--VINGDCT 57 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHH-------------------HHH----HHHHHC-SSE--EEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHH-------------------HHH----HHHHhc-CcE--EEEcCCC
Confidence 589999999999999999999995 7999985321 221 222211 222 222222
Q ss_pred Ch-----hhcCCCcEEEEecCChhHHHHHHHHHHhcC
Q 001074 258 TK-----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQ 289 (1163)
Q Consensus 258 ~~-----e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~ 289 (1163)
+. ..+.++|+||.+..+......+...++..+
T Consensus 58 ~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 58 KIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYG 94 (140)
T ss_dssp SHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcC
Confidence 11 225689999999877666666777788776
No 57
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.75 E-value=0.048 Score=62.55 Aligned_cols=94 Identities=14% Similarity=0.147 Sum_probs=61.8
Q ss_pred hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEE
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~ 653 (1163)
++.||+|+|||.+|..+++.|+.. ..++++|.+. .+.+. ..+.+ .
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~-------~~v~~~~~~~-------------------~~~~~-------~~~~~--~ 59 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNN-------------------ENLEK-------VKEFA--T 59 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCH-------------------HHHHH-------HTTTS--E
T ss_pred CccEEEEECCCHHHHHHHHHHhcC-------CCeEEEEcCH-------------------HHHHH-------HhccC--C
Confidence 456899999999999999998642 4678776431 12221 12222 2
Q ss_pred EEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecC
Q 001074 654 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESG 706 (1163)
Q Consensus 654 ~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sg 706 (1163)
.+.-.+.. .+.+ .++++++|+||+|+... ....+.+.|.+.++.+++..
T Consensus 60 ~~~~d~~d-~~~l--~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 60 PLKVDASN-FDKL--VEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp EEECCTTC-HHHH--HHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECC
T ss_pred cEEEecCC-HHHH--HHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeee
Confidence 22223322 1222 45678999999999765 34568889999999999854
No 58
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.73 E-value=0.026 Score=54.40 Aligned_cols=89 Identities=15% Similarity=0.149 Sum_probs=53.9
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~~ 655 (1163)
.+|+|+|+|.+|..+++.|+..|. +++++|.+.- +.+. +.+.. .+. .+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~------~v~~~d~~~~-------------------~~~~----~~~~~-~~~--~~ 52 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH------DIVLIDIDKD-------------------ICKK----ASAEI-DAL--VI 52 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEEESCHH-------------------HHHH----HHHHC-SSE--EE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECCHH-------------------HHHH----HHHhc-CcE--EE
Confidence 589999999999999999999987 7889875321 1211 22111 122 22
Q ss_pred eccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccc
Q 001074 656 QNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYF 698 (1163)
Q Consensus 656 ~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~ 698 (1163)
...... ...+...-..++|+||.|+.+......+...+...
T Consensus 53 ~~d~~~--~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~ 93 (140)
T 1lss_A 53 NGDCTK--IKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSY 93 (140)
T ss_dssp ESCTTS--HHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHT
T ss_pred EcCCCC--HHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHc
Confidence 222221 11111122468999999998876655555555443
No 59
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=94.71 E-value=0.037 Score=61.15 Aligned_cols=74 Identities=19% Similarity=0.272 Sum_probs=52.7
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
.+++++++|+|+||+|..++..|+..|+ .+|+|++.+ ..|++.+++.+.. ..
T Consensus 117 ~l~~k~~lvlGaGg~~~aia~~L~~~G~-----~~v~i~~R~-------------------~~~a~~la~~~~~----~~ 168 (272)
T 3pwz_A 117 PLRNRRVLLLGAGGAVRGALLPFLQAGP-----SELVIANRD-------------------MAKALALRNELDH----SR 168 (272)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTCC-----SEEEEECSC-------------------HHHHHHHHHHHCC----TT
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCC-----CEEEEEeCC-------------------HHHHHHHHHHhcc----CC
Confidence 3678899999999999999999999999 899988532 2377777776654 12
Q ss_pred EEEEeccCCcccccccchhhhccCCEEEEccC
Q 001074 652 IEALQNRVGPETENVFDDTFWENITCVINALD 683 (1163)
Q Consensus 652 I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alD 683 (1163)
+.+.. +. .+ . . .++|+||||+-
T Consensus 169 ~~~~~--~~----~l-~-~--~~~DivInaTp 190 (272)
T 3pwz_A 169 LRISR--YE----AL-E-G--QSFDIVVNATS 190 (272)
T ss_dssp EEEEC--SG----GG-T-T--CCCSEEEECSS
T ss_pred eeEee--HH----Hh-c-c--cCCCEEEECCC
Confidence 33332 11 11 1 1 68999999974
No 60
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=94.61 E-value=0.031 Score=66.16 Aligned_cols=102 Identities=14% Similarity=0.192 Sum_probs=65.9
Q ss_pred cCcEEEEecCcchHHHHHHHHHcc-cccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEE
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMG-VSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~G-v~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~ 653 (1163)
..||+|||+|++|..++..|++.+ + .-..|+++|.|.... ++ .+.+ .+++
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv---~~~~I~vaD~~~~~~------------~~--------~~~~-----g~~~- 63 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDI---KPSQVTIIAAEGTKV------------DV--------AQQY-----GVSF- 63 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCC---CGGGEEEEESSCCSC------------CH--------HHHH-----TCEE-
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCC---ceeEEEEeccchhhh------------hH--------Hhhc-----CCce-
Confidence 468999999999999999999864 3 015899998654310 11 1111 2333
Q ss_pred EEeccCCcccc-cccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecCCC
Q 001074 654 ALQNRVGPETE-NVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTL 708 (1163)
Q Consensus 654 ~~~~~v~~~~e-~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sgt~ 708 (1163)
....++.++. ..+ ..++++.|+|||+.....+ ..+-+.|.+.|+.+|+...+
T Consensus 64 -~~~~Vdadnv~~~l-~aLl~~~DvVIN~s~~~~~-l~Im~acleaGv~YlDTa~E 116 (480)
T 2ph5_A 64 -KLQQITPQNYLEVI-GSTLEENDFLIDVSIGISS-LALIILCNQKGALYINAATE 116 (480)
T ss_dssp -EECCCCTTTHHHHT-GGGCCTTCEEEECCSSSCH-HHHHHHHHHHTCEEEESSCC
T ss_pred -eEEeccchhHHHHH-HHHhcCCCEEEECCccccC-HHHHHHHHHcCCCEEECCCC
Confidence 3334443321 111 2344556999999877655 45666999999999997753
No 61
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=94.55 E-value=0.043 Score=60.99 Aligned_cols=74 Identities=20% Similarity=0.298 Sum_probs=53.7
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
.+.+++++|+|+||+|..++..|+..|+ .+|+|++.+ ..|++.+++.+.... .
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L~~~G~-----~~v~v~~R~-------------------~~~a~~la~~~~~~~---~ 175 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPLLDQQP-----ASITVTNRT-------------------FAKAEQLAELVAAYG---E 175 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTCC-----SEEEEEESS-------------------HHHHHHHHHHHGGGS---C
T ss_pred CccCCEEEEECchHHHHHHHHHHHhcCC-----CeEEEEECC-------------------HHHHHHHHHHhhccC---C
Confidence 3578899999999999999999999999 899998543 246777777776532 2
Q ss_pred EEEEeccCCcccccccchhhhccCCEEEEccC
Q 001074 652 IEALQNRVGPETENVFDDTFWENITCVINALD 683 (1163)
Q Consensus 652 I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alD 683 (1163)
+.+.. + + +.-.++|+||||+-
T Consensus 176 ~~~~~--~----~-----~l~~~aDiIInaTp 196 (281)
T 3o8q_A 176 VKAQA--F----E-----QLKQSYDVIINSTS 196 (281)
T ss_dssp EEEEE--G----G-----GCCSCEEEEEECSC
T ss_pred eeEee--H----H-----HhcCCCCEEEEcCc
Confidence 33321 1 1 11157999999984
No 62
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=94.54 E-value=0.051 Score=60.05 Aligned_cols=73 Identities=21% Similarity=0.221 Sum_probs=52.6
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
.+++++|+|+|+||.|..++..|...|+++|+|++.+ ..|++.+++.+.. ..+....
T Consensus 117 ~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~-------------------~~~a~~la~~~~~----~~~~~~~ 173 (272)
T 3pwz_A 117 PLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD-------------------MAKALALRNELDH----SRLRISR 173 (272)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHCC----TTEEEEC
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC-------------------HHHHHHHHHHhcc----CCeeEee
Confidence 3678999999999999999999999999999998742 2377777766643 1233321
Q ss_pred -cCCChhhcCCCcEEEEecC
Q 001074 255 -SKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 255 -~~l~~e~l~~fdvVI~~~~ 273 (1163)
+++.. .++|+||.|+.
T Consensus 174 ~~~l~~---~~~DivInaTp 190 (272)
T 3pwz_A 174 YEALEG---QSFDIVVNATS 190 (272)
T ss_dssp SGGGTT---CCCSEEEECSS
T ss_pred HHHhcc---cCCCEEEECCC
Confidence 11211 57899988874
No 63
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=94.45 E-value=0.072 Score=59.12 Aligned_cols=74 Identities=16% Similarity=0.212 Sum_probs=54.1
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
.+.+++|+|+|+||.|..++..|...|+++|+|++.+ ..|++.+++.+.... .+.+....
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~-------------------~~~a~~la~~~~~~~-~~~~~~~~ 182 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRT-------------------FAKAEQLAELVAAYG-EVKAQAFE 182 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS-------------------HHHHHHHHHHHGGGS-CEEEEEGG
T ss_pred CccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC-------------------HHHHHHHHHHhhccC-CeeEeeHH
Confidence 3678999999999999999999999999999998752 237777777775542 22322211
Q ss_pred cCCChhhcCCCcEEEEecC
Q 001074 255 SKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~ 273 (1163)
++ ..++|+||.|+.
T Consensus 183 -~l----~~~aDiIInaTp 196 (281)
T 3o8q_A 183 -QL----KQSYDVIINSTS 196 (281)
T ss_dssp -GC----CSCEEEEEECSC
T ss_pred -Hh----cCCCCEEEEcCc
Confidence 11 268899998874
No 64
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.44 E-value=0.023 Score=56.01 Aligned_cols=38 Identities=21% Similarity=0.351 Sum_probs=31.9
Q ss_pred HHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 570 QKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 570 q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
..+..+++|+|+|+|++|..+++.|+..|+ . ++++|.+
T Consensus 16 ~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-----~-v~v~~r~ 53 (144)
T 3oj0_A 16 VRKNGGNKILLVGNGMLASEIAPYFSYPQY-----K-VTVAGRN 53 (144)
T ss_dssp HHHHCCCEEEEECCSHHHHHHGGGCCTTTC-----E-EEEEESC
T ss_pred HHhccCCEEEEECCCHHHHHHHHHHHhCCC-----E-EEEEcCC
Confidence 344458999999999999999999999898 5 8888753
No 65
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.41 E-value=0.077 Score=52.70 Aligned_cols=94 Identities=9% Similarity=0.101 Sum_probs=61.1
Q ss_pred hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEE
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~ 653 (1163)
.+.+|+|+|+|.+|..+++.|...|. .++++|.|.- .+++.+++.. ...+ .
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~------~V~vid~~~~------------------~~~~~~~~~~---~~~~--~ 52 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ------NVTVISNLPE------------------DDIKQLEQRL---GDNA--D 52 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC------CEEEEECCCH------------------HHHHHHHHHH---CTTC--E
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC------CEEEEECCCh------------------HHHHHHHHhh---cCCC--e
Confidence 35789999999999999999999997 8999986521 0111222211 1222 3
Q ss_pred EEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccc
Q 001074 654 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYF 698 (1163)
Q Consensus 654 ~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~ 698 (1163)
.+...... ...+...-++++|+||.|+++.+.-..+...++..
T Consensus 53 ~i~gd~~~--~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 53 VIPGDSND--SSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp EEESCTTS--HHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH
T ss_pred EEEcCCCC--HHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH
Confidence 34433332 11222333678999999999888777777777654
No 66
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.38 E-value=0.19 Score=49.18 Aligned_cols=90 Identities=18% Similarity=0.265 Sum_probs=59.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l 257 (1163)
+.+|+|+|+|.+|..+++.|...|. .++++|.+.- ++ +.+++ ..+.+ ...+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~-------------------~~----~~~~~--~g~~~--i~gd~ 58 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRT-------------------RV----DELRE--RGVRA--VLGNA 58 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHH-------------------HH----HHHHH--TTCEE--EESCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HH----HHHHH--cCCCE--EECCC
Confidence 4589999999999999999999997 7999986431 22 23333 23332 33333
Q ss_pred -Chh-----hcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeE
Q 001074 258 -TKE-----QLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFI 295 (1163)
Q Consensus 258 -~~e-----~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI 295 (1163)
+++ .+.++|+||++..+......+-..+++.++.+..|
T Consensus 59 ~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 59 ANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPDIEII 102 (140)
T ss_dssp TSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEE
T ss_pred CCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHHCCCCeEE
Confidence 222 24678999999887666665666777776444443
No 67
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.32 E-value=0.13 Score=57.65 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=30.8
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 177 ~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
...+|.|||+|.+|..+|++|+.+|...++++|.+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 34689999999999999999999998789999864
No 68
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.27 E-value=0.094 Score=53.60 Aligned_cols=87 Identities=9% Similarity=0.003 Sum_probs=58.3
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHh-CCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvla-GVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
+.+.+|+|+|+|.+|..+++.|... |. .++++|.+.- |++ .+++.. +.+ ..
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~-------------------~~~----~~~~~g--~~~--~~ 88 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREE-------------------AAQ----QHRSEG--RNV--IS 88 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHH-------------------HHH----HHHHTT--CCE--EE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHH-------------------HHH----HHHHCC--CCE--EE
Confidence 4577999999999999999999999 97 6888886331 222 233322 222 11
Q ss_pred cCC-Ch----h--hcCCCcEEEEecCChhHHHHHHHHHHhcCC
Q 001074 255 SKL-TK----E--QLSDFQAVVFTDISLDKAIEFDDFCHNHQP 290 (1163)
Q Consensus 255 ~~l-~~----e--~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~ 290 (1163)
.+. ++ + .+.++|+||.+..+......+-..++..++
T Consensus 89 gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~ 131 (183)
T 3c85_A 89 GDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNY 131 (183)
T ss_dssp CCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTC
T ss_pred cCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCC
Confidence 222 11 1 256889999988776666666667787764
No 69
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=94.11 E-value=0.045 Score=63.01 Aligned_cols=94 Identities=14% Similarity=0.155 Sum_probs=61.8
Q ss_pred hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEE
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~ 653 (1163)
++++|+|+|+|++|..+++.|+.. . .++|.|.+. .|++.+++ ...
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-~------~V~V~~R~~-------------------~~a~~la~-------~~~-- 59 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-F------DVYIGDVNN-------------------ENLEKVKE-------FAT-- 59 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-S------EEEEEESCH-------------------HHHHHHTT-------TSE--
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-C------eEEEEECCH-------------------HHHHHHHh-------hCC--
Confidence 578999999999999999999987 5 688876432 23333332 111
Q ss_pred EEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecC
Q 001074 654 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESG 706 (1163)
Q Consensus 654 ~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sg 706 (1163)
+....+.. .+.+ .+.++++|+||+|+-.... ..+...|...++.+++..
T Consensus 60 ~~~~d~~~-~~~l--~~ll~~~DvVIn~~P~~~~-~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 60 PLKVDASN-FDKL--VEVMKEFELVIGALPGFLG-FKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp EEECCTTC-HHHH--HHHHTTCSCEEECCCHHHH-HHHHHHHHHTTCCEEECC
T ss_pred eEEEecCC-HHHH--HHHHhCCCEEEECCChhhh-HHHHHHHHHhCCeEEEcc
Confidence 11112211 1111 3567899999999865433 347789999999999854
No 70
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.99 E-value=0.04 Score=61.62 Aligned_cols=37 Identities=8% Similarity=0.319 Sum_probs=33.0
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+.+++|+|+|+|++|..++..|+..|+ .+|+|+|.+
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L~~~G~-----~~V~v~nR~ 174 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSLLSTAA-----ERIDMANRT 174 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECSS
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHHCCC-----CEEEEEeCC
Confidence 3678899999999999999999999999 899998654
No 71
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.95 E-value=0.13 Score=58.18 Aligned_cols=76 Identities=14% Similarity=0.120 Sum_probs=54.0
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhc----CCCEEE
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NAVVLS 251 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLN----p~V~V~ 251 (1163)
|+..+|.|+|+|.+|..+|..|+..|.+.++|+|-+. .|++..+..|+..+ ..++|.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~v~ 65 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE-------------------GTPQGKGLDIAESSPVDGFDAKFT 65 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHHHHHHHTCCCCEE
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc-------------------hhHHHHHHHHhchhhhcCCCCEEE
Confidence 5678999999999999999999999988899998532 23443344454443 245555
Q ss_pred EeecCCChhhcCCCcEEEEecC
Q 001074 252 TLTSKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 252 ~~~~~l~~e~l~~fdvVI~~~~ 273 (1163)
.... .+.+.+.|+||.+..
T Consensus 66 ~t~d---~~a~~~aDiVIiaag 84 (324)
T 3gvi_A 66 GAND---YAAIEGADVVIVTAG 84 (324)
T ss_dssp EESS---GGGGTTCSEEEECCS
T ss_pred EeCC---HHHHCCCCEEEEccC
Confidence 4332 367889999999854
No 72
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=93.79 E-value=0.036 Score=63.59 Aligned_cols=88 Identities=14% Similarity=0.167 Sum_probs=57.7
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 177 ~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
++.||+|+|+|.+|..+++.|... ..+++.|.+ . +++..+.+.+... .-+
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~-------------------~-------~~~~~~~~~~~~~--~~d 64 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN-------------------N-------ENLEKVKEFATPL--KVD 64 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC-------------------H-------HHHHHHTTTSEEE--ECC
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC-------------------H-------HHHHHHhccCCcE--EEe
Confidence 345799999999999999998643 467776632 1 1223333433322 112
Q ss_pred CC-----hhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEe
Q 001074 257 LT-----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKA 297 (1163)
Q Consensus 257 l~-----~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~ 297 (1163)
++ .+.++++|+||.|..+. ....+.+.|.+.+ +.++..
T Consensus 65 ~~d~~~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g--~~yvD~ 107 (365)
T 3abi_A 65 ASNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSK--VDMVDV 107 (365)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHT--CEEEEC
T ss_pred cCCHHHHHHHHhCCCEEEEecCCc-ccchHHHHHHhcC--cceEee
Confidence 22 24578999999887543 4567889999999 777753
No 73
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.79 E-value=0.05 Score=53.58 Aligned_cols=72 Identities=18% Similarity=0.178 Sum_probs=50.2
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 177 ~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
...+|+|+|+|++|..+++.|...|+. ++++|.+. .|++..++.+. +.+.... +
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~-------------------~~~~~~a~~~~-----~~~~~~~-~ 73 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNI-------------------DHVRAFAEKYE-----YEYVLIN-D 73 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCH-------------------HHHHHHHHHHT-----CEEEECS-C
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCH-------------------HHHHHHHHHhC-----CceEeec-C
Confidence 488999999999999999999999987 99998532 24444444432 2322211 1
Q ss_pred CChhhcCCCcEEEEecCCh
Q 001074 257 LTKEQLSDFQAVVFTDISL 275 (1163)
Q Consensus 257 l~~e~l~~fdvVI~~~~~~ 275 (1163)
..+.+.++|+||.|+...
T Consensus 74 -~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 74 -IDSLIKNNDVIITATSSK 91 (144)
T ss_dssp -HHHHHHTCSEEEECSCCS
T ss_pred -HHHHhcCCCEEEEeCCCC
Confidence 134567899999987643
No 74
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.77 E-value=0.08 Score=55.87 Aligned_cols=88 Identities=13% Similarity=0.126 Sum_probs=58.4
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~~ 655 (1163)
.+|+|+|+|.+|..+++.|...|. .++++|.|.= +++.+++. .+. ..+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~------~v~vid~~~~-------------------~~~~l~~~-----~~~--~~i 48 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKY------GVVIINKDRE-------------------LCEEFAKK-----LKA--TII 48 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTC------CEEEEESCHH-------------------HHHHHHHH-----SSS--EEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECCHH-------------------HHHHHHHH-----cCC--eEE
Confidence 379999999999999999999997 8999985421 22222211 122 234
Q ss_pred eccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhccc
Q 001074 656 QNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLY 697 (1163)
Q Consensus 656 ~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~ 697 (1163)
...... ...+...-.+++|+||.|+++......+...+..
T Consensus 49 ~gd~~~--~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~ 88 (218)
T 3l4b_C 49 HGDGSH--KEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMK 88 (218)
T ss_dssp ESCTTS--HHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHH
T ss_pred EcCCCC--HHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHH
Confidence 433332 1122233357899999999998887777776654
No 75
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=93.60 E-value=0.2 Score=58.37 Aligned_cols=95 Identities=14% Similarity=0.268 Sum_probs=65.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHhC-C-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 179 SNILVSGMQGLGAEIAKNLILAG-V-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaG-V-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
.+|+|+|+|++|..+++.|+..| + ..+++.|.+ ..|++.+++.+....+ ..+.....+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~-------------------~~~~~~la~~l~~~~~-~~~~~~~~D 61 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRT-------------------LSKCQEIAQSIKAKGY-GEIDITTVD 61 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC-------------------HHHHHHHHHHHHHTTC-CCCEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECC-------------------HHHHHHHHHHhhhhcC-CceEEEEec
Confidence 48999999999999999999988 4 689998753 2366666666655432 123333334
Q ss_pred CCh-----hhcCC--CcEEEEecCChhHHHHHHHHHHhcCCCceeEE
Q 001074 257 LTK-----EQLSD--FQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 296 (1163)
Q Consensus 257 l~~-----e~l~~--fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~ 296 (1163)
+++ +.+.+ .|+||.+..+.. ...+.+.|.+.+ +.++.
T Consensus 62 ~~d~~~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g--~~vvD 105 (405)
T 4ina_A 62 ADSIEELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTG--VPYLD 105 (405)
T ss_dssp TTCHHHHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHT--CCEEE
T ss_pred CCCHHHHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhC--CCEEE
Confidence 432 23444 799998875433 457778899999 77764
No 76
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.57 E-value=0.42 Score=53.32 Aligned_cols=75 Identities=21% Similarity=0.263 Sum_probs=51.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhc----CCCEEEEe
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NAVVLSTL 253 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLN----p~V~V~~~ 253 (1163)
.+|.|+|+|.+|+.+|..|+..|+ ..++++|.+. .|++.....+...+ ..+.+.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~-- 60 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE-------------------AKVKADQIDFQDAMANLEAHGNIV-- 60 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHGGGSSSCCEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH-------------------HHHHHHHHHHHhhhhhcCCCeEEE--
Confidence 479999999999999999999996 6899998532 24444444443332 223443
Q ss_pred ecCCChhhcCCCcEEEEecCChh
Q 001074 254 TSKLTKEQLSDFQAVVFTDISLD 276 (1163)
Q Consensus 254 ~~~l~~e~l~~fdvVI~~~~~~~ 276 (1163)
..+. +.+.+.|+||.|.....
T Consensus 61 ~~d~--~~~~~aDvViiav~~~~ 81 (309)
T 1hyh_A 61 INDW--AALADADVVISTLGNIK 81 (309)
T ss_dssp ESCG--GGGTTCSEEEECCSCGG
T ss_pred eCCH--HHhCCCCEEEEecCCcc
Confidence 2333 56789999999986533
No 77
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=93.55 E-value=0.092 Score=58.19 Aligned_cols=38 Identities=21% Similarity=0.352 Sum_probs=34.6
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
.+++++++|+|+||.|..++..|+..|+ .+|+|++.+.
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~-----~~v~v~~R~~ 151 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVR-----PTLTVANRTM 151 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCC-----SCCEEECSCG
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEeCCH
Confidence 4789999999999999999999999999 8999997664
No 78
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=93.46 E-value=0.26 Score=54.38 Aligned_cols=89 Identities=16% Similarity=0.208 Sum_probs=62.4
Q ss_pred HHHHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCc--cEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHh
Q 001074 569 LQKKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQG--KLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATS 645 (1163)
Q Consensus 569 ~q~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g--~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~ 645 (1163)
....|.+++++|.| .||||.++++.|+..|. + +++++|.+ ..+.+.+++.+..
T Consensus 27 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~-----~~~~V~~~~r~-------------------~~~~~~~~~~l~~ 82 (287)
T 3rku_A 27 AAERLAKKTVLITGASAGIGKATALEYLEASN-----GDMKLILAARR-------------------LEKLEELKKTIDQ 82 (287)
T ss_dssp HHHHHTTCEEEEESTTSHHHHHHHHHHHHHHT-----TCSEEEEEESC-------------------HHHHHHHHHHHHH
T ss_pred chhhcCCCEEEEecCCChHHHHHHHHHHHcCC-----CCceEEEEECC-------------------HHHHHHHHHHHHh
Confidence 34678999999998 68999999999999987 4 77777643 2356667777777
Q ss_pred hCCCCeEEEEeccCCcccc--cccc--hhhhccCCEEEEc
Q 001074 646 INPRLNIEALQNRVGPETE--NVFD--DTFWENITCVINA 681 (1163)
Q Consensus 646 ~np~~~I~~~~~~v~~~~e--~~~~--~~f~~~~DvVi~a 681 (1163)
.+|..++..+...+..... ..+. .+-+..+|++|++
T Consensus 83 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn 122 (287)
T 3rku_A 83 EFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNN 122 (287)
T ss_dssp HCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEEC
T ss_pred hCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 7778888888877764321 1110 1123467777776
No 79
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.45 E-value=0.29 Score=55.33 Aligned_cols=76 Identities=14% Similarity=0.166 Sum_probs=54.1
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhc----CCCEEE
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NAVVLS 251 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLN----p~V~V~ 251 (1163)
|...+|.|+|+|.+|+.+|..|+..|+++++|+|.+. .|++..+..|+... ..+++.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~-------------------~~~~g~a~dL~~~~~~~~~~~~v~ 63 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ-------------------GMPNGKALDLLQTCPIEGVDFKVR 63 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCCcEEE
Confidence 4567999999999999999999999988899998532 23444444454332 345565
Q ss_pred EeecCCChhhcCCCcEEEEecC
Q 001074 252 TLTSKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 252 ~~~~~l~~e~l~~fdvVI~~~~ 273 (1163)
... +.+.+.+.|+||.+..
T Consensus 64 ~t~---d~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 64 GTN---DYKDLENSDVVIVTAG 82 (321)
T ss_dssp EES---CGGGGTTCSEEEECCS
T ss_pred EcC---CHHHHCCCCEEEEcCC
Confidence 432 2467889999999853
No 80
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.25 E-value=0.25 Score=52.18 Aligned_cols=102 Identities=18% Similarity=0.135 Sum_probs=60.4
Q ss_pred HHHHhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEE
Q 001074 172 TMRRLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVL 250 (1163)
Q Consensus 172 ~q~kL~~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V 250 (1163)
-+.+|++.+|+|.|+ |++|.++++.|+..|. +|++++.+.- +.+ .+.+. .+ .
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~-------------------~~~----~~~~~--~~-~ 67 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEE-------------------QGP----ELRER--GA-S 67 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGG-------------------GHH----HHHHT--TC-S
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChH-------------------HHH----HHHhC--CC-c
Confidence 356788999999997 9999999999999996 7888875321 111 12221 22 0
Q ss_pred EEeecCCC---hhhcCCCcEEEEecC-------------ChhHHHHHHHHHHhcCCCceeEEeeecc
Q 001074 251 STLTSKLT---KEQLSDFQAVVFTDI-------------SLDKAIEFDDFCHNHQPAISFIKAEVRG 301 (1163)
Q Consensus 251 ~~~~~~l~---~e~l~~fdvVI~~~~-------------~~~~~~~ln~~cr~~~~~IpfI~~~~~G 301 (1163)
+....+++ .+.+.+.|+||.+.. +......+-+.|++.+. -.+|..++.|
T Consensus 68 ~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~iv~~SS~~ 133 (236)
T 3e8x_A 68 DIVVANLEEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGI-KRFIMVSSVG 133 (236)
T ss_dssp EEEECCTTSCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTC-CEEEEECCTT
T ss_pred eEEEcccHHHHHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCC-CEEEEEecCC
Confidence 33344443 245678999997754 12223456677877762 2466666644
No 81
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.18 E-value=0.15 Score=53.64 Aligned_cols=37 Identities=19% Similarity=0.334 Sum_probs=29.2
Q ss_pred HHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 571 KKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 571 ~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.++...+|.|||+|.+|+.+++.|+..|. +++++|.+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~------~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGH------EVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTC------EEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 35677899999999999999999999997 78888754
No 82
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=93.16 E-value=0.49 Score=53.09 Aligned_cols=72 Identities=19% Similarity=0.215 Sum_probs=51.8
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHH----hcCCCEEEEeec
Q 001074 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE----LNNAVVLSTLTS 255 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~e----LNp~V~V~~~~~ 255 (1163)
+|.|+|+|.+|..++..|+..|++++.|+|-+. .|++..+..|.+ ++..+++....+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~d 61 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP-------------------GKPQGEALDLAHAAAELGVDIRISGSNS 61 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCCEEEESC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh-------------------hhHHHHHHHHHHhhhhcCCCeEEEECCC
Confidence 689999999999999999999996699999531 233333344443 455666766432
Q ss_pred CCChhhcCCCcEEEEecC
Q 001074 256 KLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 256 ~l~~e~l~~fdvVI~~~~ 273 (1163)
.+.+.+.|+||.+..
T Consensus 62 ---~~a~~~aD~Vi~~ag 76 (308)
T 2d4a_B 62 ---YEDMRGSDIVLVTAG 76 (308)
T ss_dssp ---GGGGTTCSEEEECCS
T ss_pred ---HHHhCCCCEEEEeCC
Confidence 246889999999843
No 83
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.13 E-value=0.056 Score=60.42 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=33.3
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
+..++|+|+|+||+|..++..|...|+++|++++.+
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 668899999999999999999999999999998853
No 84
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.10 E-value=0.23 Score=52.27 Aligned_cols=92 Identities=9% Similarity=0.091 Sum_probs=60.8
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCCC-
Q 001074 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT- 258 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l~- 258 (1163)
+|+|+|+|.+|..+++.|...|. .++++|.+.- +++ .+.+. ..+. +...+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~-------------------~~~----~l~~~-~~~~--~i~gd~~~ 54 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRE-------------------LCE----EFAKK-LKAT--IIHGDGSH 54 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHH-------------------HHH----HHHHH-SSSE--EEESCTTS
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHH-------------------HHH----HHHHH-cCCe--EEEcCCCC
Confidence 79999999999999999999997 7889885321 222 22221 1222 2333332
Q ss_pred h-----hhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEeee
Q 001074 259 K-----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEV 299 (1163)
Q Consensus 259 ~-----e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~~~ 299 (1163)
+ ..+.++|+||++..+......+...+++..+ .+-|.+.+
T Consensus 55 ~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~-~~~iia~~ 99 (218)
T 3l4b_C 55 KEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFG-VKRVVSLV 99 (218)
T ss_dssp HHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSC-CCEEEECC
T ss_pred HHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcC-CCeEEEEE
Confidence 2 2367899999999887777778888887432 44444433
No 85
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.00 E-value=0.14 Score=53.41 Aligned_cols=94 Identities=14% Similarity=0.117 Sum_probs=59.5
Q ss_pred cEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001074 577 KVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (1163)
Q Consensus 577 kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~~ 655 (1163)
||+|.|+ |+||.++++.|+..|. ++++++.+.- +.. .+ ..+. ++.+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~-------------------~~~----~~--~~~~--~~~~ 48 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH------EVLAVVRDPQ-------------------KAA----DR--LGAT--VATL 48 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCHH-------------------HHH----HH--TCTT--SEEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC------EEEEEEeccc-------------------ccc----cc--cCCC--ceEE
Confidence 6999997 9999999999999997 7888764321 111 11 1123 3445
Q ss_pred eccCCcccccccchhhhccCCEEEEccC----------chHHHHHHHhhcccccccEEecCCC
Q 001074 656 QNRVGPETENVFDDTFWENITCVINALD----------NVNARLYVDQRCLYFQKPLLESGTL 708 (1163)
Q Consensus 656 ~~~v~~~~e~~~~~~f~~~~DvVi~alD----------n~~aR~~v~~~c~~~~~PlI~sgt~ 708 (1163)
...+..... ..+.++|+||++.. |+..-..+-+.|...++.+|..++.
T Consensus 49 ~~D~~d~~~-----~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 49 VKEPLVLTE-----ADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp ECCGGGCCH-----HHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred ecccccccH-----hhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 555543221 45678999999874 3444455666777666666655443
No 86
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.00 E-value=0.17 Score=49.56 Aligned_cols=86 Identities=12% Similarity=0.135 Sum_probs=54.5
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
+.+|+|+|+|.+|..+++.|...|. .++++|.|.- +.+. +++ ..+ ..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~------~v~vid~~~~-------------------~~~~----~~~--~g~--~~ 53 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI------PLVVIETSRT-------------------RVDE----LRE--RGV--RA 53 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC------CEEEEESCHH-------------------HHHH----HHH--TTC--EE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC------CEEEEECCHH-------------------HHHH----HHH--cCC--CE
Confidence 4589999999999999999999998 8999987632 2222 222 123 23
Q ss_pred EeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhc
Q 001074 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRC 695 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c 695 (1163)
+...... +..+...-.+++|+||.|+++...-..+-..+
T Consensus 54 i~gd~~~--~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a 92 (140)
T 3fwz_A 54 VLGNAAN--EEIMQLAHLECAKWLILTIPNGYEAGEIVASA 92 (140)
T ss_dssp EESCTTS--HHHHHHTTGGGCSEEEECCSCHHHHHHHHHHH
T ss_pred EECCCCC--HHHHHhcCcccCCEEEEECCChHHHHHHHHHH
Confidence 3333322 11121222468999999999876554444343
No 87
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=92.92 E-value=0.076 Score=60.20 Aligned_cols=111 Identities=14% Similarity=0.142 Sum_probs=64.0
Q ss_pred HHHHHhcCcEEEEe-cCcchHHHHHHHHHc-ccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhh
Q 001074 569 LQKKLEDAKVFIVG-SGALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSI 646 (1163)
Q Consensus 569 ~q~kL~~~kVlvVG-aGglGce~lknLa~~-Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~ 646 (1163)
+...++.++|+|.| .|.||..+++.|+.. |. +++++|...-....+ .
T Consensus 18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~------~V~~~~r~~~~~~~~-----~-------------------- 66 (372)
T 3slg_A 18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTDW------EVFGMDMQTDRLGDL-----V-------------------- 66 (372)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHHSSC------EEEEEESCCTTTGGG-----G--------------------
T ss_pred CCcccCCCEEEEECCCChHHHHHHHHHHhCCCC------EEEEEeCChhhhhhh-----c--------------------
Confidence 34556778999999 699999999999998 76 788887543111110 0
Q ss_pred CCCCeEEEEeccCCcccccccchhhhccCCEEEEccCchH-----------------HHHHHHhhcccccccEEecCCCC
Q 001074 647 NPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVN-----------------ARLYVDQRCLYFQKPLLESGTLG 709 (1163)
Q Consensus 647 np~~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~-----------------aR~~v~~~c~~~~~PlI~sgt~G 709 (1163)
..-.++.+...+..+.+.+ .+.++++|+||++..... .-..+-+.|...++.+|..++.+
T Consensus 67 -~~~~v~~~~~Dl~~d~~~~--~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~ 143 (372)
T 3slg_A 67 -KHERMHFFEGDITINKEWV--EYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSE 143 (372)
T ss_dssp -GSTTEEEEECCTTTCHHHH--HHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGG
T ss_pred -cCCCeEEEeCccCCCHHHH--HHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHH
Confidence 0114555666665222211 345568899998553211 11334556666666777766655
Q ss_pred cccc
Q 001074 710 AKCN 713 (1163)
Q Consensus 710 ~~G~ 713 (1163)
..|.
T Consensus 144 vyg~ 147 (372)
T 3slg_A 144 VYGM 147 (372)
T ss_dssp GGBS
T ss_pred HhCC
Confidence 5443
No 88
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=92.85 E-value=0.24 Score=51.69 Aligned_cols=94 Identities=19% Similarity=0.265 Sum_probs=60.1
Q ss_pred cEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001074 577 KVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (1163)
Q Consensus 577 kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~~ 655 (1163)
||+|.| .|+||.++++.|+..|. ++++++.+.-....+ + .++.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~------~V~~~~R~~~~~~~~---------------------------~--~~~~~ 46 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY------QIYAGARKVEQVPQY---------------------------N--NVKAV 46 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC------EEEEEESSGGGSCCC---------------------------T--TEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC------EEEEEECCccchhhc---------------------------C--CceEE
Confidence 799999 79999999999999997 888887653211111 1 34555
Q ss_pred eccCCcccccccchhhhccCCEEEEccC---------chHHHHHHHhhcccccc-cEEecCC
Q 001074 656 QNRVGPETENVFDDTFWENITCVINALD---------NVNARLYVDQRCLYFQK-PLLESGT 707 (1163)
Q Consensus 656 ~~~v~~~~e~~~~~~f~~~~DvVi~alD---------n~~aR~~v~~~c~~~~~-PlI~sgt 707 (1163)
...+....+.+ .+.++++|+||++.. |+..-..+-+.|.+.+. .+|..++
T Consensus 47 ~~D~~d~~~~~--~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 47 HFDVDWTPEEM--AKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp ECCTTSCHHHH--HTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EecccCCHHHH--HHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 55555311222 345678999998875 44445556666766654 4554444
No 89
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=92.84 E-value=0.15 Score=60.63 Aligned_cols=100 Identities=15% Similarity=0.170 Sum_probs=59.3
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
.+..++|+|+|+|++|..+++.|+..|- -+|+++|.+. .|++.+++. +.+.
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g-----~~V~v~~R~~-------------------~ka~~la~~-----~~~~ 70 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDD-----INVTVACRTL-------------------ANAQALAKP-----SGSK 70 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTT-----EEEEEEESSH-------------------HHHHHHHGG-----GTCE
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCC-----CeEEEEECCH-------------------HHHHHHHHh-----cCCc
Confidence 4567799999999999999999999842 3788886431 233333321 1222
Q ss_pred EEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecC
Q 001074 652 IEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESG 706 (1163)
Q Consensus 652 I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sg 706 (1163)
.....+... +.+ .+.++++|+||+|+-.... ..+...|...++.+++..
T Consensus 71 --~~~~D~~d~-~~l--~~~l~~~DvVIn~tp~~~~-~~v~~a~l~~g~~vvd~~ 119 (467)
T 2axq_A 71 --AISLDVTDD-SAL--DKVLADNDVVISLIPYTFH-PNVVKSAIRTKTDVVTSS 119 (467)
T ss_dssp --EEECCTTCH-HHH--HHHHHTSSEEEECSCGGGH-HHHHHHHHHHTCEEEECS
T ss_pred --EEEEecCCH-HHH--HHHHcCCCEEEECCchhhh-HHHHHHHHhcCCEEEEee
Confidence 222222211 111 2445789999999875422 235666777777777643
No 90
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=92.83 E-value=0.13 Score=55.80 Aligned_cols=82 Identities=13% Similarity=0.295 Sum_probs=56.2
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
|++++++|.| +||||.++++.|+..|. +++++|.+ ..+.+.+++.+.+..+...
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~ 62 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA------NVLINGRR-------------------EENVNETIKEIRAQYPDAI 62 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS-------------------HHHHHHHHHHHHHHCTTCE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHhhCCCce
Confidence 5677888888 58999999999999997 78887643 2355566677777777777
Q ss_pred EEEEeccCCcccc--cccchhhhccCCEEEEc
Q 001074 652 IEALQNRVGPETE--NVFDDTFWENITCVINA 681 (1163)
Q Consensus 652 I~~~~~~v~~~~e--~~~~~~f~~~~DvVi~a 681 (1163)
+..+...+..... .++ +-+..+|++|++
T Consensus 63 ~~~~~~D~~~~~~~~~~~--~~~g~id~lv~n 92 (267)
T 3t4x_A 63 LQPVVADLGTEQGCQDVI--EKYPKVDILINN 92 (267)
T ss_dssp EEEEECCTTSHHHHHHHH--HHCCCCSEEEEC
T ss_pred EEEEecCCCCHHHHHHHH--HhcCCCCEEEEC
Confidence 7777766654221 111 112356776665
No 91
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.81 E-value=0.22 Score=52.03 Aligned_cols=97 Identities=18% Similarity=0.220 Sum_probs=61.2
Q ss_pred CcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 576 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 576 ~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
++|+|.| .|.||..+++.|+..|. ++++++.+.-....+. -.++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~~~~~~----------------------------~~~~~ 50 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF------EVTAVVRHPEKIKIEN----------------------------EHLKV 50 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC------EEEEECSCGGGCCCCC----------------------------TTEEE
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC------EEEEEEcCcccchhcc----------------------------CceEE
Confidence 5899999 59999999999999996 8888887643222221 13444
Q ss_pred EeccCCcccccccchhhhccCCEEEEccC-----------chHHHHHHHhhcccccc-cEEecCCCC
Q 001074 655 LQNRVGPETENVFDDTFWENITCVINALD-----------NVNARLYVDQRCLYFQK-PLLESGTLG 709 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~~~~DvVi~alD-----------n~~aR~~v~~~c~~~~~-PlI~sgt~G 709 (1163)
+...+... +.+ .+.++++|+||++.. |+..-..+-+.|...++ .+|..++.+
T Consensus 51 ~~~Dl~d~-~~~--~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 114 (227)
T 3dhn_A 51 KKADVSSL-DEV--CEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG 114 (227)
T ss_dssp ECCCTTCH-HHH--HHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred EEecCCCH-HHH--HHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence 44444421 111 244567777777754 44455566667777664 466655554
No 92
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.81 E-value=0.23 Score=54.09 Aligned_cols=99 Identities=13% Similarity=0.120 Sum_probs=61.5
Q ss_pred hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEE
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~ 653 (1163)
+.++|+|.|+|.||..+++.|+..|. ++++++.+.- .+ .+. ++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~------~V~~~~r~~~---~~--------------------------~~~--~~ 44 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH------EVTGLRRSAQ---PM--------------------------PAG--VQ 44 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC------CEEEEECTTS---CC--------------------------CTT--CC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC------EEEEEeCCcc---cc--------------------------ccC--Cc
Confidence 35689999999999999999999997 7888765321 11 122 23
Q ss_pred EEeccCCcccccccchhhhcc-CCEEEEccC------------chHHHHHHHhhcccccc-cEEecCCCCccc
Q 001074 654 ALQNRVGPETENVFDDTFWEN-ITCVINALD------------NVNARLYVDQRCLYFQK-PLLESGTLGAKC 712 (1163)
Q Consensus 654 ~~~~~v~~~~e~~~~~~f~~~-~DvVi~alD------------n~~aR~~v~~~c~~~~~-PlI~sgt~G~~G 712 (1163)
.+...+... +. + .+.+++ +|+||++.. |+..-..+-+.|...++ .+|..++.+..|
T Consensus 45 ~~~~Dl~d~-~~-~-~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg 114 (286)
T 3gpi_A 45 TLIADVTRP-DT-L-ASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYG 114 (286)
T ss_dssp EEECCTTCG-GG-C-TTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCC
T ss_pred eEEccCCCh-HH-H-HHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEc
Confidence 344444421 11 1 233445 999998762 44455566667776664 466655555443
No 93
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=92.72 E-value=0.13 Score=55.94 Aligned_cols=75 Identities=17% Similarity=0.159 Sum_probs=52.6
Q ss_pred cEEEEec-CcchHHHHHHHHHc-ccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 577 KVFIVGS-GALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 577 kVlvVGa-GglGce~lknLa~~-Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
||.|+|| |.+|..+++.+... |+ --+.++|.+
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~-----elva~~d~~----------------------------------------- 35 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDL-----TLSAELDAG----------------------------------------- 35 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTC-----EEEEEECTT-----------------------------------------
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCC-----EEEEEEccC-----------------------------------------
Confidence 7999997 99999999998765 66 223466542
Q ss_pred EeccCCcccccccchhhh-ccCCEEEEccCchHHHHHHHhhcccccccEEecCCCCc
Q 001074 655 LQNRVGPETENVFDDTFW-ENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGA 710 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~-~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sgt~G~ 710 (1163)
.+ + +++. .+.|+||+++ ++++-...-..|.++++|+| .||.|+
T Consensus 36 ------~d----l-~~~~~~~~DvvIDfT-~p~a~~~~~~~a~~~g~~~V-igTTG~ 79 (245)
T 1p9l_A 36 ------DP----L-SLLTDGNTEVVIDFT-HPDVVMGNLEFLIDNGIHAV-VGTTGF 79 (245)
T ss_dssp ------CC----T-HHHHHTTCCEEEECS-CTTTHHHHHHHHHHTTCEEE-ECCCCC
T ss_pred ------CC----H-HHHhccCCcEEEEcc-ChHHHHHHHHHHHHcCCCEE-EcCCCC
Confidence 00 0 1122 3789999999 45555666679999999998 456664
No 94
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.72 E-value=0.19 Score=54.30 Aligned_cols=64 Identities=17% Similarity=0.248 Sum_probs=45.3
Q ss_pred HHhcCcEEEEec-C-cchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCC
Q 001074 572 KLEDAKVFIVGS-G-ALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR 649 (1163)
Q Consensus 572 kL~~~kVlvVGa-G-glGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~ 649 (1163)
.+++++|+|.|+ | |||.++++.|+..|. +++++|.+. .+.+.+.+.+.+.. .
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~-~ 72 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGA------DVVISDYHE-------------------RRLGETRDQLADLG-L 72 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHTTC-S
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCC------EEEEecCCH-------------------HHHHHHHHHHHhcC-C
Confidence 367889999998 7 899999999999998 788887542 24444555554443 2
Q ss_pred CeEEEEeccCCc
Q 001074 650 LNIEALQNRVGP 661 (1163)
Q Consensus 650 ~~I~~~~~~v~~ 661 (1163)
.++..+...+..
T Consensus 73 ~~~~~~~~Dl~~ 84 (266)
T 3o38_A 73 GRVEAVVCDVTS 84 (266)
T ss_dssp SCEEEEECCTTC
T ss_pred CceEEEEeCCCC
Confidence 356666666653
No 95
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=92.65 E-value=0.79 Score=51.20 Aligned_cols=109 Identities=13% Similarity=0.187 Sum_probs=68.7
Q ss_pred HHhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCC---CE
Q 001074 174 RRLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNA---VV 249 (1163)
Q Consensus 174 ~kL~~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~---V~ 249 (1163)
..+...+|||.|+ |.+|..+++.|...|. +|+.++...-. .......+..+.+. -.
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~ 80 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTG-------------------HQYNLDEVKTLVSTEQWSR 80 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC-------------------CHHHHHHHHHTSCHHHHTT
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCC-------------------chhhhhhhhhccccccCCc
Confidence 3567889999995 8899999999999995 77777753210 01112223322210 24
Q ss_pred EEEeecCCCh-----hhcCCCcEEEEecCC-----------------hhHHHHHHHHHHhcCCCc-eeEEeeecceeE
Q 001074 250 LSTLTSKLTK-----EQLSDFQAVVFTDIS-----------------LDKAIEFDDFCHNHQPAI-SFIKAEVRGLFG 304 (1163)
Q Consensus 250 V~~~~~~l~~-----e~l~~fdvVI~~~~~-----------------~~~~~~ln~~cr~~~~~I-pfI~~~~~G~~G 304 (1163)
++....++.+ +.+.++|+||-+... ......+-+.|++.+ + .||.+++.+.+|
T Consensus 81 ~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vyg 156 (351)
T 3ruf_A 81 FCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ--VQSFTYAASSSTYG 156 (351)
T ss_dssp EEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGT
T ss_pred eEEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEecHHhcC
Confidence 5555566643 356789999976532 111234667888887 4 788888877765
No 96
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.65 E-value=0.37 Score=54.23 Aligned_cols=78 Identities=17% Similarity=0.253 Sum_probs=53.2
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhc----CC
Q 001074 173 MRRLFASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NA 247 (1163)
Q Consensus 173 q~kL~~s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLN----p~ 247 (1163)
|.++...+|.|+|+|.+|..++..|+..|. ..+.|+|-+. .|++..+..|.... ..
T Consensus 1 m~~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~ 61 (317)
T 3d0o_A 1 MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT-------------------EKVRGDVMDLKHATPYSPTT 61 (317)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH-------------------HHHHHHHHHHHHHGGGSSSC
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHhhhhhhhHHhhhhhcCCC
Confidence 345667899999999999999999999986 7899998531 23433333333322 34
Q ss_pred CEEEEeecCCChhhcCCCcEEEEecC
Q 001074 248 VVLSTLTSKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 248 V~V~~~~~~l~~e~l~~fdvVI~~~~ 273 (1163)
+++.. . +.+.+.+.|+||.+..
T Consensus 62 ~~v~~--~--~~~a~~~aDvVvi~ag 83 (317)
T 3d0o_A 62 VRVKA--G--EYSDCHDADLVVICAG 83 (317)
T ss_dssp CEEEE--C--CGGGGTTCSEEEECCC
T ss_pred eEEEe--C--CHHHhCCCCEEEECCC
Confidence 56654 2 3556899999999864
No 97
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.61 E-value=0.53 Score=52.87 Aligned_cols=72 Identities=18% Similarity=0.254 Sum_probs=51.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcC----CCEEEE
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN----AVVLST 252 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp----~V~V~~ 252 (1163)
..+|.|+|+|.+|..+|..|+..|. ++|.++|.+. .|+++.+..|....+ .+++..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~-------------------~~~~~~~~dl~~~~~~~~~~~~i~~ 66 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE-------------------SKAIGDAMDFNHGKVFAPKPVDIWH 66 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHTTSSSSCCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc-------------------chHHHHHhhHHHHhhhcCCCeEEEc
Confidence 3689999999999999999999984 6899998531 244444444544444 455553
Q ss_pred eecCCChhhcCCCcEEEEec
Q 001074 253 LTSKLTKEQLSDFQAVVFTD 272 (1163)
Q Consensus 253 ~~~~l~~e~l~~fdvVI~~~ 272 (1163)
. +.+.+.+.|+||.+.
T Consensus 67 --~--~~~al~~aDvViia~ 82 (316)
T 1ldn_A 67 --G--DYDDCRDADLVVICA 82 (316)
T ss_dssp --C--CGGGTTTCSEEEECC
T ss_pred --C--cHHHhCCCCEEEEcC
Confidence 2 245688999999984
No 98
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.57 E-value=0.34 Score=53.57 Aligned_cols=90 Identities=14% Similarity=0.116 Sum_probs=57.7
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~~ 655 (1163)
.||.|||+|.+|+.++++|+..|. +++++|.+. .|++.+++ . .+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~------~V~~~d~~~-------------------~~~~~~~~----~--g~~---- 48 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY------LLNVFDLVQ-------------------SAVDGLVA----A--GAS---- 48 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC------EEEEECSSH-------------------HHHHHHHH----T--TCE----
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC------eEEEEcCCH-------------------HHHHHHHH----C--CCe----
Confidence 589999999999999999999997 788887543 12222222 1 111
Q ss_pred eccCCcccccccchhhhccCCEEEEcc-CchHHHHHHH---hhc--ccccccEEecCCC
Q 001074 656 QNRVGPETENVFDDTFWENITCVINAL-DNVNARLYVD---QRC--LYFQKPLLESGTL 708 (1163)
Q Consensus 656 ~~~v~~~~e~~~~~~f~~~~DvVi~al-Dn~~aR~~v~---~~c--~~~~~PlI~sgt~ 708 (1163)
...+. .+..++.|+||.|+ +....+..+. ... ...+..+|+.++.
T Consensus 49 ---~~~~~-----~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~ 99 (302)
T 2h78_A 49 ---AARSA-----RDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTI 99 (302)
T ss_dssp ---ECSSH-----HHHHTTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCC
T ss_pred ---EcCCH-----HHHHhCCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCC
Confidence 01111 34567899999999 5555666665 332 3345566765543
No 99
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.53 E-value=0.46 Score=48.42 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=29.5
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 178 ASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 178 ~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
+.+|+|.|+ |++|.++++.|+..| .++++++.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~ 37 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDS 37 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCh
Confidence 468999997 999999999999999 4888888654
No 100
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.51 E-value=0.12 Score=57.67 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=30.6
Q ss_pred hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
+-.+|.|||+|.+|+.++++|+..|. .++++|.+.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~------~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGF------KVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCC------eEEEEeCCH
Confidence 34689999999999999999999997 788887654
No 101
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.44 E-value=0.26 Score=52.40 Aligned_cols=85 Identities=15% Similarity=0.110 Sum_probs=59.3
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 177 ~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
.+.+|+|+|+|.+|..+++.|...|. ++++|.+.- ++ +.+. +.+. +...+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~-------------------~~----~~~~---~~~~--~i~gd 57 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV--FVLAEDENV-------------------RK----KVLR---SGAN--FVHGD 57 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGG-------------------HH----HHHH---TTCE--EEESC
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHH-------------------HH----HHHh---cCCe--EEEcC
Confidence 35689999999999999999999987 888885321 21 2222 3333 33444
Q ss_pred CC-hh-----hcCCCcEEEEecCChhHHHHHHHHHHhcCCC
Q 001074 257 LT-KE-----QLSDFQAVVFTDISLDKAIEFDDFCHNHQPA 291 (1163)
Q Consensus 257 l~-~e-----~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~ 291 (1163)
.+ ++ .+.++|+||++..+.+....+...+++.++.
T Consensus 58 ~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~ 98 (234)
T 2aef_A 58 PTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDES 98 (234)
T ss_dssp TTCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred CCCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCCC
Confidence 33 22 3678999999988777777888889998843
No 102
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=92.43 E-value=0.22 Score=54.97 Aligned_cols=67 Identities=9% Similarity=0.114 Sum_probs=49.1
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 177 ~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
.+++|+|+|+||.|..++..|...|+++|+|++.+ ..||+.+++.+. ..+ ...
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt-------------------~~ka~~la~~~~-----~~~---~~~ 170 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN-------------------VKTGQYLAALYG-----YAY---INS 170 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC-------------------HHHHHHHHHHHT-----CEE---ESC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC-------------------HHHHHHHHHHcC-----Ccc---chh
Confidence 35799999999999999999999999999998743 236776666552 111 111
Q ss_pred CChhhcCCCcEEEEecC
Q 001074 257 LTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 257 l~~e~l~~fdvVI~~~~ 273 (1163)
+. +.++|+||.|+.
T Consensus 171 ~~---~~~~DivInaTp 184 (271)
T 1npy_A 171 LE---NQQADILVNVTS 184 (271)
T ss_dssp CT---TCCCSEEEECSS
T ss_pred hh---cccCCEEEECCC
Confidence 11 457899998874
No 103
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.35 E-value=0.44 Score=53.50 Aligned_cols=85 Identities=13% Similarity=0.006 Sum_probs=54.8
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l 257 (1163)
..+|.|||+|.+|..+|++|+..|...++++|.+.-. ..|++...+++.+.. + . ..+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~----------------~~~~~~~~~~~~~~g--~---~-~~s- 80 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFND----------------PAASGALRARAAELG--V---E-PLD- 80 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGC----------------TTTHHHHHHHHHHTT--C---E-EES-
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCcc----------------ccchHHHHHHHHHCC--C---C-CCC-
Confidence 4689999999999999999999995589999864310 013444444554432 2 1 101
Q ss_pred ChhhcCCCcEEEEecCChhHHHHHHHHH
Q 001074 258 TKEQLSDFQAVVFTDISLDKAIEFDDFC 285 (1163)
Q Consensus 258 ~~e~l~~fdvVI~~~~~~~~~~~ln~~c 285 (1163)
..+.+.+.|+||.|..+......+.++.
T Consensus 81 ~~e~~~~aDvVi~avp~~~~~~~~~~i~ 108 (317)
T 4ezb_A 81 DVAGIACADVVLSLVVGAATKAVAASAA 108 (317)
T ss_dssp SGGGGGGCSEEEECCCGGGHHHHHHHHG
T ss_pred HHHHHhcCCEEEEecCCHHHHHHHHHHH
Confidence 2345677899888876555544444443
No 104
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.34 E-value=0.11 Score=57.36 Aligned_cols=33 Identities=27% Similarity=0.466 Sum_probs=29.8
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
++|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~------~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF------AVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEeCCH
Confidence 589999999999999999999998 889988653
No 105
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.29 E-value=0.29 Score=50.01 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=29.4
Q ss_pred cCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 575 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 575 ~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
+++|+|.|+ |+||.++++.|+..|. ++++++.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~------~V~~~~r~~ 37 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGY------EVTVLVRDS 37 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC------eEEEEEeCh
Confidence 368999997 9999999999999996 888887653
No 106
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=92.21 E-value=0.08 Score=60.91 Aligned_cols=87 Identities=14% Similarity=0.087 Sum_probs=57.6
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 177 ~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
++++|+|+|+|++|..++++|+.. ..+++.|.+. .|++.++ ..... ..-+
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~~-------------------~~a~~la-------~~~~~--~~~d 64 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNN-------------------ENLEKVK-------EFATP--LKVD 64 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCH-------------------HHHHHHT-------TTSEE--EECC
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECCH-------------------HHHHHHH-------hhCCe--EEEe
Confidence 678999999999999999999988 6888887532 2333322 12221 1111
Q ss_pred C-C----hhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEE
Q 001074 257 L-T----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 296 (1163)
Q Consensus 257 l-~----~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~ 296 (1163)
+ + .+.++++|+||.|. +......+.+.|-+.+ +.++.
T Consensus 65 ~~~~~~l~~ll~~~DvVIn~~-P~~~~~~v~~a~l~~G--~~~vD 106 (365)
T 2z2v_A 65 ASNFDKLVEVMKEFELVIGAL-PGFLGFKSIKAAIKSK--VDMVD 106 (365)
T ss_dssp TTCHHHHHHHHTTCSCEEECC-CHHHHHHHHHHHHHTT--CCEEE
T ss_pred cCCHHHHHHHHhCCCEEEECC-ChhhhHHHHHHHHHhC--CeEEE
Confidence 1 1 24577899999985 4444456778888888 66665
No 107
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.19 E-value=0.67 Score=51.90 Aligned_cols=33 Identities=27% Similarity=0.279 Sum_probs=30.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
.+|.|+|+|.+|+.+|..|+..|...++++|.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 589999999999999999999998679999964
No 108
>3onh_A Ubiquitin-activating enzyme E1-like; ligase, SUMO conjugation, UBC9; 1.60A {Saccharomyces cerevisiae} PDB: 3ong_A
Probab=92.14 E-value=0.16 Score=49.22 Aligned_cols=45 Identities=16% Similarity=0.350 Sum_probs=35.8
Q ss_pred CCcHHHHHHHHHHc-CCc-eeeee--cCCceeecCCCcchhhcccCcHHHHH
Q 001074 1077 NPTLRELIQWLKDK-GLN-AYSIS--CGSCLLFNSMFPRHKERMDKKVVDLA 1124 (1163)
Q Consensus 1077 ~~TL~eli~~~~~k-~l~-~~~I~--~g~~llY~~~~~~~~~~l~~~l~~l~ 1124 (1163)
.+||++|++.++++ |+. -.+|+ .+.++||+. ...++|+|+|+||.
T Consensus 19 ~~TL~dLV~~l~~~~gy~~eiSV~~~~~~rLLyD~---DfDDnl~k~L~dLg 67 (127)
T 3onh_A 19 KMKLSDFVVLIREKYSYPQDISLLDASNQRLLFDY---DFEDLNDRTLSEIN 67 (127)
T ss_dssp HCBHHHHHHHHHHHHTCCSSEEEEETTTTEEEEET---TBCTTTTSBTTTTT
T ss_pred ccCHHHHHHHHHHhcCCCCcEEEEecCCCCeEeCC---CccccccCcHHHcC
Confidence 58999999999888 764 34555 357899995 45699999999994
No 109
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.07 E-value=0.38 Score=53.22 Aligned_cols=103 Identities=16% Similarity=0.107 Sum_probs=65.3
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHh--cCCCEEEE
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL--NNAVVLST 252 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eL--Np~V~V~~ 252 (1163)
.+++++|+|+|+||.|..++..|...|+++|++++.+.-....+... ++.... +.+.+. ..++-|++
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~-------~~~~~~----~~~~~~~~~aDiVIna 182 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN-------INKINL----SHAESHLDEFDIIINT 182 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC-------CEEECH----HHHHHTGGGCSEEEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh-------cccccH----hhHHHHhcCCCEEEEC
Confidence 47889999999999999999999999999999999876544444432 111001 122221 23444443
Q ss_pred eecC--------CChhhcCCCcEEEEecCChhHHHHHHHHHHhcC
Q 001074 253 LTSK--------LTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQ 289 (1163)
Q Consensus 253 ~~~~--------l~~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~ 289 (1163)
.+.. ++.+.+..-.+|++...++.. ..+-+.+++.|
T Consensus 183 Tp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~-T~ll~~A~~~G 226 (277)
T 3don_A 183 TPAGMNGNTDSVISLNRLASHTLVSDIVYNPYK-TPILIEAEQRG 226 (277)
T ss_dssp CC-------CCSSCCTTCCSSCEEEESCCSSSS-CHHHHHHHHTT
T ss_pred ccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCC-CHHHHHHHHCc
Confidence 3211 233445566778877665332 34677788888
No 110
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.05 E-value=0.35 Score=54.74 Aligned_cols=75 Identities=16% Similarity=0.217 Sum_probs=55.6
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcC---CCEEE
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN---AVVLS 251 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp---~V~V~ 251 (1163)
-...+|.|+|+|.+|+.+|..|+..|+ +++.|+|.+ ..|++..+..|+...| .+.+.
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~~i~ 67 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF-------------------KDKTKGDAIDLEDALPFTSPKKIY 67 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC-------------------hHHHHHHHhhHhhhhhhcCCcEEE
Confidence 345789999999999999999999998 689999852 2366666666665554 34443
Q ss_pred EeecCCChhhcCCCcEEEEecC
Q 001074 252 TLTSKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 252 ~~~~~l~~e~l~~fdvVI~~~~ 273 (1163)
.. +.+.+.+.|+||.+..
T Consensus 68 --~~--~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 68 --SA--EYSDAKDADLVVITAG 85 (326)
T ss_dssp --EC--CGGGGTTCSEEEECCC
T ss_pred --EC--cHHHhcCCCEEEECCC
Confidence 22 3456889999998865
No 111
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=92.03 E-value=0.59 Score=51.74 Aligned_cols=81 Identities=15% Similarity=0.133 Sum_probs=51.1
Q ss_pred HhcCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 573 L~~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
+.+++|+|.|+ |+||..+++.|+..|. +++++|.+. .+.+.+.+.+....+ -+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~-~~ 62 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY------KVRGTARSA-------------------SKLANLQKRWDAKYP-GR 62 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESSH-------------------HHHHHHHHHHHHHST-TT
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC------EEEEEeCCc-------------------ccHHHHHHHhhccCC-Cc
Confidence 35678999996 9999999999999986 777775431 123333333333322 23
Q ss_pred EEEE-eccCCcccccccchhhhccCCEEEEcc
Q 001074 652 IEAL-QNRVGPETENVFDDTFWENITCVINAL 682 (1163)
Q Consensus 652 I~~~-~~~v~~~~e~~~~~~f~~~~DvVi~al 682 (1163)
++.+ ...+... +.+ .+.++++|+||++.
T Consensus 63 ~~~~~~~D~~d~-~~~--~~~~~~~d~vih~A 91 (342)
T 1y1p_A 63 FETAVVEDMLKQ-GAY--DEVIKGAAGVAHIA 91 (342)
T ss_dssp EEEEECSCTTST-TTT--TTTTTTCSEEEECC
T ss_pred eEEEEecCCcCh-HHH--HHHHcCCCEEEEeC
Confidence 5555 4555432 111 34566899999986
No 112
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=91.96 E-value=0.27 Score=55.77 Aligned_cols=78 Identities=14% Similarity=0.177 Sum_probs=55.6
Q ss_pred HHhhcCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCC---CE
Q 001074 174 RRLFASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNA---VV 249 (1163)
Q Consensus 174 ~kL~~s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~---V~ 249 (1163)
......+|.|+|+|.+|+.+|..|+..|. ..++|+|-+ ..|++..+.-|+...+. ..
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~~~~g~a~DL~~~~~~~~~~~ 75 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI-------------------EDKLKGEMMDLQHGSLFLKTPK 75 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGCSCCE
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC-------------------hHHHHHHHHhhhhhhhccCCCe
Confidence 45667899999999999999999999997 589999842 34677777777765432 23
Q ss_pred EEEeecCCChhhcCCCcEEEEecC
Q 001074 250 LSTLTSKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 250 V~~~~~~l~~e~l~~fdvVI~~~~ 273 (1163)
+.. .. +.+.+.+.|+||.+..
T Consensus 76 i~~-~~--d~~~~~~aDiVvi~aG 96 (331)
T 4aj2_A 76 IVS-SK--DYSVTANSKLVIITAG 96 (331)
T ss_dssp EEE-CS--SGGGGTTEEEEEECCS
T ss_pred EEE-cC--CHHHhCCCCEEEEccC
Confidence 322 22 2345889999998754
No 113
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.82 E-value=0.56 Score=52.32 Aligned_cols=72 Identities=15% Similarity=0.079 Sum_probs=51.0
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCC-eEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhc----CCCEEEEee
Q 001074 180 NILVSGMQGLGAEIAKNLILAGVK-SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NAVVLSTLT 254 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvlaGVg-~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLN----p~V~V~~~~ 254 (1163)
+|.|+|+|++|..+|..|+..|.. +++|+|.+. .|++..+..|+..+ ...+|....
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 62 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE-------------------DLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH-------------------HHHHHHHHHHHHHHHTTTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh-------------------HHHHHHHHHHHhhhhhcCCCCEEEEeC
Confidence 799999999999999999999964 899998532 23433333344433 345665543
Q ss_pred cCCChhhcCCCcEEEEecC
Q 001074 255 SKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~ 273 (1163)
+ .+.+.+.|+||.+..
T Consensus 63 d---~~a~~~aDiVViaag 78 (294)
T 1oju_A 63 D---YSLLKGSEIIVVTAG 78 (294)
T ss_dssp C---GGGGTTCSEEEECCC
T ss_pred C---HHHhCCCCEEEECCC
Confidence 2 567889999998864
No 114
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=91.78 E-value=0.39 Score=52.25 Aligned_cols=65 Identities=15% Similarity=0.220 Sum_probs=45.4
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
.+++++|+|.| .|+||.++++.|+..|. +++++|.+. .+.+.+++.+.......
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~ 83 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL------KVVGCARTV-------------------GNIEELAAECKSAGYPG 83 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHTTCSS
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEECCh-------------------HHHHHHHHHHHhcCCCc
Confidence 47788999998 68999999999999997 788876432 23444455555544444
Q ss_pred eEEEEeccCCc
Q 001074 651 NIEALQNRVGP 661 (1163)
Q Consensus 651 ~I~~~~~~v~~ 661 (1163)
++..+...+..
T Consensus 84 ~~~~~~~Dl~~ 94 (279)
T 1xg5_A 84 TLIPYRCDLSN 94 (279)
T ss_dssp EEEEEECCTTC
T ss_pred eEEEEEecCCC
Confidence 66666655553
No 115
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=91.76 E-value=0.33 Score=52.62 Aligned_cols=64 Identities=20% Similarity=0.190 Sum_probs=48.2
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
|++++++|.| .||||.++++.|+..|. +++++|.+ ..+.+.+++.+....+..+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~ 60 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA------AVAFCARD-------------------GERLRAAESALRQRFPGAR 60 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHHSTTCC
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHHhcCCce
Confidence 5678899997 68999999999999998 78888753 2355566666766666666
Q ss_pred EEEEeccCCc
Q 001074 652 IEALQNRVGP 661 (1163)
Q Consensus 652 I~~~~~~v~~ 661 (1163)
+..+...+..
T Consensus 61 ~~~~~~Dv~~ 70 (265)
T 3lf2_A 61 LFASVCDVLD 70 (265)
T ss_dssp EEEEECCTTC
T ss_pred EEEEeCCCCC
Confidence 7777766654
No 116
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=91.71 E-value=0.8 Score=47.70 Aligned_cols=94 Identities=14% Similarity=0.105 Sum_probs=61.2
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 001074 179 SNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (1163)
Q Consensus 179 s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l 257 (1163)
.+|+|.| .|++|..+++.|...| .+|++++...-....+.. .++....++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~----------------------------~~~~~~~Dl 55 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHPEKIKIENE----------------------------HLKVKKADV 55 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCGGGCCCCCT----------------------------TEEEECCCT
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCcccchhccC----------------------------ceEEEEecC
Confidence 5899999 5899999999999999 488888876433322211 233333343
Q ss_pred Ch-----hhcCCCcEEEEecC-----------ChhHHHHHHHHHHhcCCCc-eeEEeeeccee
Q 001074 258 TK-----EQLSDFQAVVFTDI-----------SLDKAIEFDDFCHNHQPAI-SFIKAEVRGLF 303 (1163)
Q Consensus 258 ~~-----e~l~~fdvVI~~~~-----------~~~~~~~ln~~cr~~~~~I-pfI~~~~~G~~ 303 (1163)
.+ +.+.++|+||.+.. +......+-+.|++.+ + .||..++.+.+
T Consensus 56 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~ 116 (227)
T 3dhn_A 56 SSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG--VNRFLMVGGAGSL 116 (227)
T ss_dssp TCHHHHHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTT--CSEEEEECCSTTS
T ss_pred CCHHHHHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhC--CCEEEEeCChhhc
Confidence 21 23456677776543 2334556777888887 4 67877776644
No 117
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.67 E-value=0.48 Score=55.39 Aligned_cols=90 Identities=12% Similarity=0.291 Sum_probs=63.6
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l 257 (1163)
+.+|+|+|+|-+|..+++.|...|+ .++++|.+.- ++ +.+++.. +. ++..+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~-------------------~v----~~~~~~g--~~--vi~GDa 55 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPD-------------------HI----ETLRKFG--MK--VFYGDA 55 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHH-------------------HH----HHHHHTT--CC--CEESCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HH----HHHHhCC--Ce--EEEcCC
Confidence 4589999999999999999999997 6999997532 22 2222221 22 222333
Q ss_pred C-hh-----hcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeE
Q 001074 258 T-KE-----QLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFI 295 (1163)
Q Consensus 258 ~-~e-----~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI 295 (1163)
+ ++ -+.++++||++.++......+-..+++.++.+++|
T Consensus 56 t~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Ii 99 (413)
T 3l9w_A 56 TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQII 99 (413)
T ss_dssp TCHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCHHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCCCCeEE
Confidence 2 22 35688999999998888888999999998544444
No 118
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.66 E-value=0.3 Score=56.02 Aligned_cols=115 Identities=17% Similarity=0.195 Sum_probs=68.4
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHh-cCCCEEEEee
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTLT 254 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eL-Np~V~V~~~~ 254 (1163)
++..+|.|||+|.+|..+|++|+..|. .++++|.+.-....+... |-..+....+.++.. .|++-+....
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~--------g~~~~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE--------GIAGARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT--------TCBCCSSHHHHHHHSCSSCEEEECSC
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC--------CCEEeCCHHHHHhcCCCCCEEEEeCC
Confidence 345789999999999999999999995 799999765333222211 100011112222222 2455555444
Q ss_pred cCCCh-------hhcCCCcEEEEecC-ChhHHHHHHHHHHhcCCCceeEEeeecc
Q 001074 255 SKLTK-------EQLSDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIKAEVRG 301 (1163)
Q Consensus 255 ~~l~~-------e~l~~fdvVI~~~~-~~~~~~~ln~~cr~~~~~IpfI~~~~~G 301 (1163)
....+ ..+..-++||++.. .+....++.+.+.+.+ +.|+.+.+.|
T Consensus 91 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g--~~~vdapVsG 143 (358)
T 4e21_A 91 AAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQG--ITYVDVGTSG 143 (358)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTT--CEEEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCC--CEEEeCCCCC
Confidence 33111 12334467776654 4556667778888888 8888876655
No 119
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.64 E-value=0.47 Score=49.87 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=29.2
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 173 MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 173 q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
..++...+|.|+|+|.+|+.+|+.|+..|. +++++|.+
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~ 51 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSK 51 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 345677899999999999999999999996 78888753
No 120
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=91.62 E-value=0.12 Score=57.39 Aligned_cols=36 Identities=11% Similarity=0.200 Sum_probs=32.7
Q ss_pred HhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++++|+|+||.|..++..|+..|+ ++|+|++.+
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~-----~~v~v~nRt 155 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFA-----KDIYVVTRN 155 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTC-----SEEEEEESC
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCC-----CEEEEEeCC
Confidence 678899999999999999999999999 899998643
No 121
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=91.53 E-value=0.38 Score=52.87 Aligned_cols=36 Identities=25% Similarity=0.343 Sum_probs=32.6
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
.+++++|+|+|+|++|..+++.|...|+ +++++|.+
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r~ 161 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNRT 161 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEECC
Confidence 3678899999999999999999999999 99998853
No 122
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.49 E-value=0.21 Score=55.87 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=27.9
Q ss_pred HHHHHhcCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 569 LQKKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 569 ~q~kL~~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.++.+.+++|+|.|+ |.||..+++.|+..|. +++++|..
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~------~V~~~~r~ 52 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR------TVRGFDLR 52 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC------CEEEEESS
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC------EEEEEeCC
Confidence 356788899999996 9999999999999997 78888754
No 123
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=91.47 E-value=1 Score=50.16 Aligned_cols=104 Identities=11% Similarity=0.140 Sum_probs=65.2
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 176 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 176 L~~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
+...+|||.|+ |.+|..+++.|+..|. +|+++|...-... . .+..+.....++...
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~-------------------~~~~~~~~~~~~~~~ 81 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRK---R-------------------NVEHWIGHENFELIN 81 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCG---G-------------------GTGGGTTCTTEEEEE
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeCCCccch---h-------------------hhhhhccCCceEEEe
Confidence 45678999997 8999999999999995 7887775321100 0 000111112345555
Q ss_pred cCCChhhcCCCcEEEEecCC---------hh--------HHHHHHHHHHhcCCCceeEEeeecceeE
Q 001074 255 SKLTKEQLSDFQAVVFTDIS---------LD--------KAIEFDDFCHNHQPAISFIKAEVRGLFG 304 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~~---------~~--------~~~~ln~~cr~~~~~IpfI~~~~~G~~G 304 (1163)
.++.+..+.++|+||.+... .. ....+-+.|++.+ +.||.+++.+.+|
T Consensus 82 ~D~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~v~g 146 (343)
T 2b69_A 82 HDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYG 146 (343)
T ss_dssp CCTTSCCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGGB
T ss_pred CccCChhhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEECcHHHhC
Confidence 66665567789999976431 11 1234556788888 6888888877655
No 124
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.43 E-value=0.92 Score=51.27 Aligned_cols=74 Identities=16% Similarity=0.153 Sum_probs=50.6
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHH----HHHHHhcCCCEEEE
Q 001074 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASV----QKLQELNNAVVLST 252 (1163)
Q Consensus 177 ~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~----~~L~eLNp~V~V~~ 252 (1163)
...+|.|+|+|.+|..+|..|+..|...++|+|.+. .+++... +.+..+....++..
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~-------------------~~l~~~~~~l~~~~~~~~~~~~i~~ 73 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE-------------------GVPQGKALDLNHCMALIGSPAKIFG 73 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH-------------------HHHHHHHHHHHhHhhccCCCCEEEE
Confidence 346899999999999999999999995699999642 1222222 22222333455665
Q ss_pred eecCCChhhcCCCcEEEEec
Q 001074 253 LTSKLTKEQLSDFQAVVFTD 272 (1163)
Q Consensus 253 ~~~~l~~e~l~~fdvVI~~~ 272 (1163)
..+ + +.+.+.|+||.+.
T Consensus 74 t~d-~--~al~~aD~VI~av 90 (328)
T 2hjr_A 74 ENN-Y--EYLQNSDVVIITA 90 (328)
T ss_dssp ESC-G--GGGTTCSEEEECC
T ss_pred CCC-H--HHHCCCCEEEEcC
Confidence 432 2 4678999999986
No 125
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=91.40 E-value=1 Score=49.65 Aligned_cols=68 Identities=15% Similarity=0.193 Sum_probs=52.8
Q ss_pred HHHHhhcCeEEEEc-CChHHHHHHHHHHHhCCC--eEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCC
Q 001074 172 TMRRLFASNILVSG-MQGLGAEIAKNLILAGVK--SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAV 248 (1163)
Q Consensus 172 ~q~kL~~s~VlIiG-~gglGsEiaKNLvlaGVg--~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V 248 (1163)
.+..|++++|+|.| .||+|.++|+.|+..|.+ ++.+.+.+ ..+.+.+.+.+.+..+..
T Consensus 27 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~ 87 (287)
T 3rku_A 27 AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR-------------------LEKLEELKKTIDQEFPNA 87 (287)
T ss_dssp HHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC-------------------HHHHHHHHHHHHHHCTTC
T ss_pred chhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC-------------------HHHHHHHHHHHHhhCCCC
Confidence 45678999999998 579999999999999875 78887642 235667777788777777
Q ss_pred EEEEeecCCC
Q 001074 249 VLSTLTSKLT 258 (1163)
Q Consensus 249 ~V~~~~~~l~ 258 (1163)
++.....+++
T Consensus 88 ~~~~~~~Dv~ 97 (287)
T 3rku_A 88 KVHVAQLDIT 97 (287)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEECCCC
Confidence 7777766654
No 126
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.35 E-value=0.48 Score=53.64 Aligned_cols=75 Identities=21% Similarity=0.224 Sum_probs=53.7
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCC--EEEEee
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAV--VLSTLT 254 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V--~V~~~~ 254 (1163)
..+|.|+|+|.+|+.+|..|+..|. ++++|+|.+ ..|++..+.-|+...|.. .+....
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~v~i~~ 65 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN-------------------KEKAMGDVMDLNHGKAFAPQPVKTSY 65 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGSSSCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc-------------------hHHHHHHHHHHHhccccccCCeEEEe
Confidence 4689999999999999999999997 689999852 236666555666554432 222223
Q ss_pred cCCChhhcCCCcEEEEecC
Q 001074 255 SKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~ 273 (1163)
. +.+.+.+.|+||.+..
T Consensus 66 ~--~~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 66 G--TYEDCKDADIVCICAG 82 (326)
T ss_dssp E--CGGGGTTCSEEEECCS
T ss_pred C--cHHHhCCCCEEEEecc
Confidence 2 2356789999998864
No 127
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.32 E-value=0.49 Score=53.27 Aligned_cols=78 Identities=19% Similarity=0.100 Sum_probs=53.1
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHh----cCCCEEE
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL----NNAVVLS 251 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eL----Np~V~V~ 251 (1163)
++..+|.|+|+|.+|+.+|..|+..|++.++|+|.+.. ..|++..+..|... .....+.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~-----------------~~~~~g~a~dl~~~~~~~~~~~~i~ 68 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQL-----------------ENPTKGKALDMLEASPVQGFDANII 68 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGG-----------------HHHHHHHHHHHHHHHHHHTCCCCEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccch-----------------HHHHHHhhhhHHHhhhhccCCCEEE
Confidence 34679999999999999999999999989999996421 11333333333322 2344555
Q ss_pred EeecCCChhhcCCCcEEEEecC
Q 001074 252 TLTSKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 252 ~~~~~l~~e~l~~fdvVI~~~~ 273 (1163)
... +.+.+.+.|+||.+..
T Consensus 69 ~t~---d~~a~~~aDvVIiaag 87 (315)
T 3tl2_A 69 GTS---DYADTADSDVVVITAG 87 (315)
T ss_dssp EES---CGGGGTTCSEEEECCS
T ss_pred EcC---CHHHhCCCCEEEEeCC
Confidence 432 2456889999999853
No 128
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=91.16 E-value=0.28 Score=52.86 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=46.4
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCC-
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR- 649 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~- 649 (1163)
.+++++++|.| .||||.++++.|+..|. +++++|.+ ..+.+.+++.+.+.++.
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~ 58 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY------RVVLIARS-------------------KQNLEKVHDEIMRSNKHV 58 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC------EEEEEESC-------------------HHHHHHHHHHHHHHCTTS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEECC-------------------HHHHHHHHHHHHHhcccc
Confidence 35678889998 58999999999999997 78887643 23556666667666554
Q ss_pred CeEEEEeccCCc
Q 001074 650 LNIEALQNRVGP 661 (1163)
Q Consensus 650 ~~I~~~~~~v~~ 661 (1163)
.++..+...+..
T Consensus 59 ~~~~~~~~Dv~~ 70 (250)
T 3nyw_A 59 QEPIVLPLDITD 70 (250)
T ss_dssp CCCEEEECCTTC
T ss_pred CcceEEeccCCC
Confidence 455556555553
No 129
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.15 E-value=0.54 Score=51.04 Aligned_cols=95 Identities=19% Similarity=0.206 Sum_probs=61.2
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 177 ~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
+..+|+|.|+|.+|+.+++.|...|. +|+.++...-. + .+.+++ ...+
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~--------------------------~~~~~~--~~~D 49 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQP---M--------------------------PAGVQT--LIAD 49 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTSC---C--------------------------CTTCCE--EECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCccc---c--------------------------ccCCce--EEcc
Confidence 45689999999999999999999997 67777653211 1 122222 2223
Q ss_pred CCh-----hhcCC-CcEEEEecC------------ChhHHHHHHHHHHhcCCCceeEEeeecceeE
Q 001074 257 LTK-----EQLSD-FQAVVFTDI------------SLDKAIEFDDFCHNHQPAISFIKAEVRGLFG 304 (1163)
Q Consensus 257 l~~-----e~l~~-fdvVI~~~~------------~~~~~~~ln~~cr~~~~~IpfI~~~~~G~~G 304 (1163)
+.+ +.+.+ +|+||.+.. +......+-+.|++.+. ..||.+++.+.+|
T Consensus 50 l~d~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-~~~v~~SS~~vyg 114 (286)
T 3gpi_A 50 VTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPL-QHVFFVSSTGVYG 114 (286)
T ss_dssp TTCGGGCTTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCC-CEEEEEEEGGGCC
T ss_pred CCChHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CEEEEEcccEEEc
Confidence 321 23444 888886542 33445667778887762 3688888888766
No 130
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=91.08 E-value=0.45 Score=53.21 Aligned_cols=115 Identities=10% Similarity=0.085 Sum_probs=67.4
Q ss_pred HHHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCC
Q 001074 570 QKKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINP 648 (1163)
Q Consensus 570 q~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np 648 (1163)
+..++.++|+|.| .|.||..+++.|+..|. +++++|...-. ... ..+.+....+
T Consensus 20 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~---------------~~~----~~~~~~~~~~ 74 (351)
T 3ruf_A 20 QLIFSPKTWLITGVAGFIGSNLLEKLLKLNQ------VVIGLDNFSTG---------------HQY----NLDEVKTLVS 74 (351)
T ss_dssp HHHHSCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECCSSC---------------CHH----HHHHHHHTSC
T ss_pred hCCCCCCeEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCCCCC---------------chh----hhhhhhhccc
Confidence 3457789999999 58999999999999997 78877643210 000 1112222111
Q ss_pred C---CeEEEEeccCCcccccccchhhhccCCEEEEccCc-----------------hHHHHHHHhhcccccc-cEEecCC
Q 001074 649 R---LNIEALQNRVGPETENVFDDTFWENITCVINALDN-----------------VNARLYVDQRCLYFQK-PLLESGT 707 (1163)
Q Consensus 649 ~---~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn-----------------~~aR~~v~~~c~~~~~-PlI~sgt 707 (1163)
. -+++.+...+... +.+ ...++++|+||++... +..-..+-+.|...++ .+|..++
T Consensus 75 ~~~~~~~~~~~~Dl~d~-~~~--~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 75 TEQWSRFCFIEGDIRDL-TTC--EQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp HHHHTTEEEEECCTTCH-HHH--HHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred cccCCceEEEEccCCCH-HHH--HHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 0 2455666666532 111 3456789999998752 2222335566666664 5666555
Q ss_pred CCccc
Q 001074 708 LGAKC 712 (1163)
Q Consensus 708 ~G~~G 712 (1163)
.+..|
T Consensus 152 ~~vyg 156 (351)
T 3ruf_A 152 SSTYG 156 (351)
T ss_dssp GGGGT
T ss_pred HHhcC
Confidence 54443
No 131
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.06 E-value=0.32 Score=54.43 Aligned_cols=94 Identities=9% Similarity=0.025 Sum_probs=58.7
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
..+|.|||+|.+|..++++|+..|. ..++++|.+. ...|.+. +.+. .+. .
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~-----~~V~~~dr~~-----------------~~~~~~~----~~~~--g~~--~ 73 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGA-----IDMAAYDAAS-----------------AESWRPR----AEEL--GVS--C 73 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSC-----CEEEEECSSC-----------------HHHHHHH----HHHT--TCE--E
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-----CeEEEEcCCC-----------------CHHHHHH----HHHC--CCE--E
Confidence 4689999999999999999999997 6899998653 1112222 2221 111 1
Q ss_pred EeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcc--cccccEEecCCC
Q 001074 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCL--YFQKPLLESGTL 708 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~--~~~~PlI~sgt~ 708 (1163)
..+. .+..++.|+||.|+-.......+..... ..+..+|+.++.
T Consensus 74 -----~~~~-----~e~~~~aDvVi~~vp~~~~~~~~~~l~~~l~~~~ivvd~st~ 119 (312)
T 3qsg_A 74 -----KASV-----AEVAGECDVIFSLVTAQAALEVAQQAGPHLCEGALYADFTSC 119 (312)
T ss_dssp -----CSCH-----HHHHHHCSEEEECSCTTTHHHHHHHHGGGCCTTCEEEECCCC
T ss_pred -----eCCH-----HHHHhcCCEEEEecCchhHHHHHHhhHhhcCCCCEEEEcCCC
Confidence 1111 2445778999999877666655554432 234556666554
No 132
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.05 E-value=0.65 Score=50.25 Aligned_cols=81 Identities=16% Similarity=0.114 Sum_probs=51.5
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~ 255 (1163)
+...+|.|||+|.+|..+++.|...|...++++|.+. .+++.+.+.+ .+.+ . .
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~-------------------~~~~~~~~~~-----g~~~--~-~ 60 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE-------------------ESARELAQKV-----EAEY--T-T 60 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH-------------------HHHHHHHHHT-----TCEE--E-S
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH-------------------HHHHHHHHHc-----CCce--e-C
Confidence 3456899999999999999999999986688887422 1333322221 1222 1 1
Q ss_pred CCChhhcCCCcEEEEecCChhHHHHHHHH
Q 001074 256 KLTKEQLSDFQAVVFTDISLDKAIEFDDF 284 (1163)
Q Consensus 256 ~l~~e~l~~fdvVI~~~~~~~~~~~ln~~ 284 (1163)
+ .++.+.+.|+||.|..+......+.++
T Consensus 61 ~-~~~~~~~~Dvvi~av~~~~~~~v~~~l 88 (266)
T 3d1l_A 61 D-LAEVNPYAKLYIVSLKDSAFAELLQGI 88 (266)
T ss_dssp C-GGGSCSCCSEEEECCCHHHHHHHHHHH
T ss_pred C-HHHHhcCCCEEEEecCHHHHHHHHHHH
Confidence 1 124567899999998655443344433
No 133
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=91.04 E-value=0.2 Score=59.15 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=29.7
Q ss_pred hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
..++|+|+|+|++|..+++.|+..|. +++++|.+
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~------~V~v~~R~ 35 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGI------KVTVACRT 35 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC------EEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC------EEEEEECC
Confidence 35789999999999999999999886 68888765
No 134
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=91.03 E-value=0.85 Score=50.86 Aligned_cols=72 Identities=15% Similarity=0.123 Sum_probs=51.6
Q ss_pred eEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHH----hcCCCEEEEee
Q 001074 180 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE----LNNAVVLSTLT 254 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~e----LNp~V~V~~~~ 254 (1163)
||.|+|+|++|+.+|-.|+..|. +++.|+|- -+.|++..+--|+. ++...++....
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di-------------------~~~~~~G~a~DL~h~~~~~~~~~~i~~~~ 62 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI-------------------AEDLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECS-------------------SHHHHHHHHHHHHHHHGGGTCCCEEEEES
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC-------------------CCCcchhhhhhhhcccccCCCCCeEecCC
Confidence 79999999999999999999885 78999983 22345555555555 33344554432
Q ss_pred cCCChhhcCCCcEEEEecC
Q 001074 255 SKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~ 273 (1163)
+.+.+++.|+||++..
T Consensus 63 ---d~~~~~~aDvVvitAG 78 (294)
T 2x0j_A 63 ---DYSLLKGSEIIVVTAG 78 (294)
T ss_dssp ---CGGGGTTCSEEEECCC
T ss_pred ---CHHHhCCCCEEEEecC
Confidence 2356889999998864
No 135
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=91.00 E-value=0.32 Score=55.02 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=32.8
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
.|.+++|.|||.|.+|..+++.|...|+ +++.+|...
T Consensus 137 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~------~V~~~dr~~ 173 (324)
T 3hg7_A 137 GLKGRTLLILGTGSIGQHIAHTGKHFGM------KVLGVSRSG 173 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSC
T ss_pred ccccceEEEEEECHHHHHHHHHHHhCCC------EEEEEcCCh
Confidence 4678899999999999999999999998 888888654
No 136
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=90.97 E-value=0.53 Score=52.53 Aligned_cols=39 Identities=23% Similarity=0.193 Sum_probs=27.3
Q ss_pred HHHHhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 172 TMRRLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 172 ~q~kL~~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
.+..+...+|||.|+ |.+|..+++.|+..|. +|+++|..
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 52 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLR 52 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 356777889999997 8999999999999996 67777754
No 137
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=90.95 E-value=0.66 Score=52.58 Aligned_cols=73 Identities=16% Similarity=0.189 Sum_probs=51.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcC---CCEEEEe
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN---AVVLSTL 253 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp---~V~V~~~ 253 (1163)
..+|.|+|+|.+|+.+|..|+..|+ +.++|+|-+ ..|++..+.-|+...+ ...+...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~-------------------~~~~~g~a~DL~~~~~~~~~~~i~~t 81 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVM-------------------EDKLKGEMMDLEHGSLFLHTAKIVSG 81 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC-------------------HHHHHHHHHHHHHHGGGSCCSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC-------------------HHHHHHHHHHhhhhhhcccCCeEEEc
Confidence 4689999999999999999999997 689999852 2244444444544322 3444432
Q ss_pred ecCCChhhcCCCcEEEEec
Q 001074 254 TSKLTKEQLSDFQAVVFTD 272 (1163)
Q Consensus 254 ~~~l~~e~l~~fdvVI~~~ 272 (1163)
.+.. .+.+.|+||.+.
T Consensus 82 -~d~~--~~~daDiVIita 97 (330)
T 3ldh_A 82 -KDYS--VSAGSKLVVITA 97 (330)
T ss_dssp -SSSC--SCSSCSEEEECC
T ss_pred -CCHH--HhCCCCEEEEeC
Confidence 3333 388999999874
No 138
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=90.95 E-value=0.41 Score=51.78 Aligned_cols=65 Identities=22% Similarity=0.284 Sum_probs=45.3
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
.+.+++++|.| .||||.++++.|+..|. +++++|.+. .+.+.+++.+.+..+..
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~ 64 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA------KLSLVDVSS-------------------EGLEASKAAVLETAPDA 64 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHHCTTC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhhcCCc
Confidence 36678899997 78999999999999997 788876432 23444455555554455
Q ss_pred eEEEEeccCCc
Q 001074 651 NIEALQNRVGP 661 (1163)
Q Consensus 651 ~I~~~~~~v~~ 661 (1163)
++..+...+..
T Consensus 65 ~~~~~~~D~~~ 75 (267)
T 1iy8_A 65 EVLTTVADVSD 75 (267)
T ss_dssp CEEEEECCTTS
T ss_pred eEEEEEccCCC
Confidence 66666666654
No 139
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=90.94 E-value=0.44 Score=53.19 Aligned_cols=36 Identities=22% Similarity=0.189 Sum_probs=27.5
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCCC-eEEEEeCC
Q 001074 176 LFASNILVSGM-QGLGAEIAKNLILAGVK-SVTLHDEG 211 (1163)
Q Consensus 176 L~~s~VlIiG~-gglGsEiaKNLvlaGVg-~itLvD~d 211 (1163)
+...+|||.|+ |.+|..+++.|+..|-. .++.+|..
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~ 59 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDAL 59 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecc
Confidence 44568999997 89999999999999932 56666643
No 140
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.92 E-value=0.13 Score=61.13 Aligned_cols=93 Identities=14% Similarity=0.244 Sum_probs=64.2
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
..||+|+|+|-+|..+++.|...|. .+++||.|.=. .+.+... ..+..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~------~v~vId~d~~~-----------------------~~~~~~~---~~~~~ 50 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENN------DITIVDKDGDR-----------------------LRELQDK---YDLRV 50 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTE------EEEEEESCHHH-----------------------HHHHHHH---SSCEE
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCC------CEEEEECCHHH-----------------------HHHHHHh---cCcEE
Confidence 3589999999999999999999887 89999977431 1222221 12334
Q ss_pred EeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccc-ccc
Q 001074 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYF-QKP 701 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~-~~P 701 (1163)
+....+. ...+...-.+++|++|.++++.++-..+...+... +.|
T Consensus 51 i~Gd~~~--~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~ 96 (461)
T 4g65_A 51 VNGHASH--PDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTP 96 (461)
T ss_dssp EESCTTC--HHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHCCS
T ss_pred EEEcCCC--HHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcCCc
Confidence 4444332 22344455688999999999998888877777653 444
No 141
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.86 E-value=0.35 Score=54.58 Aligned_cols=152 Identities=16% Similarity=0.137 Sum_probs=0.0
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC-----
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL----- 650 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~----- 650 (1163)
.+|.|||+|.+|+.++..|+..|. .++++|.+.= +.+.+.+.+.+.-+..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~------~V~l~d~~~~-------------------~~~~~~~~i~~~l~~l~~~G~ 61 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF------RVKLYDIEPR-------------------QITGALENIRKEMKSLQQSGS 61 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------CEEEECSCHH-------------------HHHHHHHHHHHHHHHHHHTTC
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC------EEEEEeCCHH-------------------HHHHHHHHHHHHHHHHHHcCc
Q ss_pred ------------eEEEEeccCCcccccccchhhhccCCEEEEcc-CchHHHHHH---HhhcccccccEEecCCCCcccce
Q 001074 651 ------------NIEALQNRVGPETENVFDDTFWENITCVINAL-DNVNARLYV---DQRCLYFQKPLLESGTLGAKCNT 714 (1163)
Q Consensus 651 ------------~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~al-Dn~~aR~~v---~~~c~~~~~PlI~sgt~G~~G~v 714 (1163)
+++....- .+..++.|+||.|+ .+...+.-+ -......+..+++..+.-.-...
T Consensus 62 ~~g~~~~~~~~~~i~~~~~~----------~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~l 131 (319)
T 2dpo_A 62 LKGSLSAEEQLSLISSCTNL----------AEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKL 131 (319)
T ss_dssp CCSSSCHHHHHHTEEEECCH----------HHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHH
T ss_pred cccccchHHHhhceEEeCCH----------HHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHH
Q ss_pred EEEeCCcccccCCCCCCCCCCCCCccccCCCCChhhHHHHHHHHhhhh
Q 001074 715 QMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGL 762 (1163)
Q Consensus 715 ~viip~~t~~y~~~~dp~~~~~p~Ct~~~fP~~~~Hci~wAr~~F~~l 762 (1163)
.-..+.-..+.+...-.|....+...+-.-|...+.+++.++.+|+.+
T Consensus 132 a~~~~~~~r~ig~Hp~~P~~~~~lveiv~g~~t~~e~~~~~~~l~~~l 179 (319)
T 2dpo_A 132 FTGLAHVKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKI 179 (319)
T ss_dssp HTTCTTGGGEEEEEECSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHT
T ss_pred HHhcCCCCCeEEeecCCchhhcceEEEeCCCCCCHHHHHHHHHHHHHc
No 142
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=90.86 E-value=0.36 Score=54.65 Aligned_cols=36 Identities=17% Similarity=0.422 Sum_probs=32.3
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|.+++|.|||.|.+|..+++.|...|+ +++.+|..
T Consensus 134 ~l~gktvGIiGlG~IG~~vA~~l~~~G~------~V~~~dr~ 169 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSLAAKASALGM------HVIGVNTT 169 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cccCCeEEEECcCHHHHHHHHHHHhCCC------EEEEECCC
Confidence 4778899999999999999999999998 88888864
No 143
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.82 E-value=1 Score=50.03 Aligned_cols=110 Identities=18% Similarity=0.214 Sum_probs=64.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcC--CCEEEEeec
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN--AVVLSTLTS 255 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp--~V~V~~~~~ 255 (1163)
+.||.+||+|-.|..+|+||+.+|. .++++|.+.-....+... |-..++ .+.++-. ++-+.....
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~--------G~~~~~----s~~e~~~~~dvvi~~l~~ 71 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGY-ELVVWNRTASKAEPLTKL--------GATVVE----NAIDAITPGGIVFSVLAD 71 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC-EEEEC-------CTTTTT--------TCEECS----SGGGGCCTTCEEEECCSS
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHc--------CCeEeC----CHHHHHhcCCceeeeccc
Confidence 4589999999999999999999997 789998655433333221 111111 1112222 222222221
Q ss_pred C------CCh---hhcCCCcEEEEec-CChhHHHHHHHHHHhcCCCceeEEeeecce
Q 001074 256 K------LTK---EQLSDFQAVVFTD-ISLDKAIEFDDFCHNHQPAISFIKAEVRGL 302 (1163)
Q Consensus 256 ~------l~~---e~l~~fdvVI~~~-~~~~~~~~ln~~cr~~~~~IpfI~~~~~G~ 302 (1163)
. +.. ..+..-++||++. .++....++.+.+.+++ +.|+.+.+.|.
T Consensus 72 ~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g--~~~ldapVsGg 126 (297)
T 4gbj_A 72 DAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYG--AHYVGAPIFAR 126 (297)
T ss_dssp HHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEEEECCEECC
T ss_pred hhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcC--CceecCCcCCC
Confidence 1 111 1233445777654 57888889999999999 99998877663
No 144
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=90.81 E-value=0.35 Score=53.93 Aligned_cols=37 Identities=19% Similarity=0.428 Sum_probs=31.4
Q ss_pred HHHhcCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 571 KKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 571 ~kL~~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+.+++|+|.|+ |+||..+++.|+..|. +++++|.+
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~------~V~~~~r~ 53 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGH------EILVIDNF 53 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTC------EEEEEECC
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 3566789999996 9999999999999996 78888764
No 145
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=90.79 E-value=1.2 Score=49.66 Aligned_cols=111 Identities=21% Similarity=0.255 Sum_probs=67.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCCC
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 258 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l~ 258 (1163)
++|.+||+|-.|..+|+||+.+|. .++++|.+.-....+.. .|-..+....+.. -+.++-+......-.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~--------~Ga~~a~s~~e~~--~~~dvv~~~l~~~~~ 72 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVA--------AGASAARSARDAV--QGADVVISMLPASQH 72 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH--------TTCEECSSHHHHH--TTCSEEEECCSCHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHH--------cCCEEcCCHHHHH--hcCCceeecCCchHH
Confidence 479999999999999999999997 78898864322222211 1111111111111 122333333332110
Q ss_pred -h----------hhcCCCcEEEEec-CChhHHHHHHHHHHhcCCCceeEEeeecce
Q 001074 259 -K----------EQLSDFQAVVFTD-ISLDKAIEFDDFCHNHQPAISFIKAEVRGL 302 (1163)
Q Consensus 259 -~----------e~l~~fdvVI~~~-~~~~~~~~ln~~cr~~~~~IpfI~~~~~G~ 302 (1163)
+ +.+..=++||++. .+++...++.+.+.+++ +.|+.+.+.|-
T Consensus 73 v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G--~~~lDaPVsGg 126 (300)
T 3obb_A 73 VEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERG--LAMLDAPVSGG 126 (300)
T ss_dssp HHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTT--CEEEECCEESC
T ss_pred HHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC--CEEEecCCCCC
Confidence 0 1122235777654 57888899999999999 99999887764
No 146
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=90.78 E-value=0.29 Score=55.13 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=31.9
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|.+++|.|||+|.+|..+++.|...|+ +++.+|.+
T Consensus 136 ~l~g~tvGIiG~G~IG~~vA~~l~~~G~------~V~~~dr~ 171 (315)
T 3pp8_A 136 TREEFSVGIMGAGVLGAKVAESLQAWGF------PLRCWSRS 171 (315)
T ss_dssp CSTTCCEEEECCSHHHHHHHHHHHTTTC------CEEEEESS
T ss_pred CcCCCEEEEEeeCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 3678899999999999999999999998 88888754
No 147
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.76 E-value=0.26 Score=54.37 Aligned_cols=80 Identities=15% Similarity=0.194 Sum_probs=51.9
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
+.+++++|.| +||+|..+++.|+..|. +++++|.+ ..|++.+++.+... +.+.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~------~V~i~~R~-------------------~~~~~~l~~~~~~~-~~~~ 170 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA------EVVLCGRK-------------------LDKAQAAADSVNKR-FKVN 170 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESS-------------------HHHHHHHHHHHHHH-HTCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC------EEEEEECC-------------------HHHHHHHHHHHHhc-CCcE
Confidence 5778999999 99999999999999998 48887643 13555555555432 1222
Q ss_pred EEEEeccCCcccccccchhhhccCCEEEEccC
Q 001074 652 IEALQNRVGPETENVFDDTFWENITCVINALD 683 (1163)
Q Consensus 652 I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alD 683 (1163)
+.. ..+... +.+ .+.++.+|+||||.-
T Consensus 171 ~~~--~D~~~~-~~~--~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 171 VTA--AETADD-ASR--AEAVKGAHFVFTAGA 197 (287)
T ss_dssp CEE--EECCSH-HHH--HHHTTTCSEEEECCC
T ss_pred EEE--ecCCCH-HHH--HHHHHhCCEEEECCC
Confidence 222 222221 111 245667899999973
No 148
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=90.73 E-value=0.49 Score=50.53 Aligned_cols=63 Identities=14% Similarity=0.258 Sum_probs=44.5
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
++++++|+|.| .||||.++++.|+..|. +++++|.+ ..+.+.+++.+....+
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~~~~~~~-- 58 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGA------AVVVADIN-------------------AEAAEAVAKQIVADGG-- 58 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEcCC-------------------HHHHHHHHHHHHhcCC--
Confidence 46788899998 58999999999999998 78888643 2344555555555443
Q ss_pred eEEEEeccCCc
Q 001074 651 NIEALQNRVGP 661 (1163)
Q Consensus 651 ~I~~~~~~v~~ 661 (1163)
++..+...+..
T Consensus 59 ~~~~~~~D~~~ 69 (253)
T 3qiv_A 59 TAISVAVDVSD 69 (253)
T ss_dssp EEEEEECCTTS
T ss_pred cEEEEEccCCC
Confidence 55556555553
No 149
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.69 E-value=0.74 Score=51.62 Aligned_cols=99 Identities=8% Similarity=0.037 Sum_probs=62.9
Q ss_pred hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEE
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~ 653 (1163)
...+|.|||+|.+|..++++|+..|. -+++++|.+.-.. .|++...+.+.+. .+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~-----~~V~~~dr~~~~~----------------~~~~~~~~~~~~~--g~--- 76 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNA-----ARLAAYDLRFNDP----------------AASGALRARAAEL--GV--- 76 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECGGGGCT----------------TTHHHHHHHHHHT--TC---
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCC-----CeEEEEeCCCccc----------------cchHHHHHHHHHC--CC---
Confidence 35789999999999999999999993 2888888653100 0233333333332 11
Q ss_pred EEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcc--cccccEEecCCC
Q 001074 654 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCL--YFQKPLLESGTL 708 (1163)
Q Consensus 654 ~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~--~~~~PlI~sgt~ 708 (1163)
+ ..+. .+..++.|+||.|+-.......+..... ..+..+|+.++.
T Consensus 77 ~-----~~s~-----~e~~~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~st~ 123 (317)
T 4ezb_A 77 E-----PLDD-----VAGIACADVVLSLVVGAATKAVAASAAPHLSDEAVFIDLNSV 123 (317)
T ss_dssp E-----EESS-----GGGGGGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEECCSC
T ss_pred C-----CCCH-----HHHHhcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEECCCC
Confidence 0 0000 2446789999999988877776655432 235567776654
No 150
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.68 E-value=1.3 Score=49.15 Aligned_cols=74 Identities=23% Similarity=0.293 Sum_probs=48.6
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHH---hcCCCEEEEe
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE---LNNAVVLSTL 253 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~e---LNp~V~V~~~ 253 (1163)
..+|+|+|+|++|+.++..|+..|. +.++++|.+. .+++..+..+.. +.+.+.+...
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~v~~~ 67 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK-------------------ERVEAEVLDMQHGSSFYPTVSIDGS 67 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH-------------------HHHHHHHHHHHHTGGGSTTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHHHHHHHHHHhhhhhcCCeEEEeC
Confidence 4689999999999999999999995 4799998642 122211111111 2234455443
Q ss_pred ecCCChhhcCCCcEEEEecC
Q 001074 254 TSKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 254 ~~~l~~e~l~~fdvVI~~~~ 273 (1163)
. +.+.+.++|+||+|..
T Consensus 68 ~---~~~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 68 D---DPEICRDADMVVITAG 84 (319)
T ss_dssp S---CGGGGTTCSEEEECCC
T ss_pred C---CHHHhCCCCEEEECCC
Confidence 2 2345788999999874
No 151
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=90.65 E-value=0.84 Score=48.06 Aligned_cols=38 Identities=32% Similarity=0.573 Sum_probs=31.2
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+.+++|+|.| .|+||.++++.|+..|.. .+++++|.+
T Consensus 15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~----~~V~~~~r~ 53 (242)
T 2bka_A 15 RMQNKSVFILGASGETGRVLLKEILEQGLF----SKVTLIGRR 53 (242)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCC----SEEEEEESS
T ss_pred hhcCCeEEEECCCcHHHHHHHHHHHcCCCC----CEEEEEEcC
Confidence 36678999999 699999999999999851 278888764
No 152
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.54 E-value=0.78 Score=50.43 Aligned_cols=33 Identities=33% Similarity=0.388 Sum_probs=29.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
-.+|.|||+|.+|+.+|..|+.+|. .++++|.+
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 3689999999999999999999998 79999864
No 153
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.53 E-value=1.4 Score=49.25 Aligned_cols=73 Identities=16% Similarity=0.114 Sum_probs=50.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHH----hcCCCEEEEee
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE----LNNAVVLSTLT 254 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~e----LNp~V~V~~~~ 254 (1163)
.+|.|+|+|.+|..++..|+..|.-.++|+|-+. .|++.....|.+ ....+++....
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 63 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE-------------------GVPQGKALDLYEASPIEGFDVRVTGTN 63 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc-------------------cHHHHHHHhHHHhHhhcCCCeEEEECC
Confidence 5899999999999999999999974499998532 123222233333 34456666543
Q ss_pred cCCChhhcCCCcEEEEecC
Q 001074 255 SKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~ 273 (1163)
+ . +.+.+.|+||.+..
T Consensus 64 d-~--~a~~~aD~Vi~a~g 79 (309)
T 1ur5_A 64 N-Y--ADTANSDVIVVTSG 79 (309)
T ss_dssp C-G--GGGTTCSEEEECCC
T ss_pred C-H--HHHCCCCEEEEcCC
Confidence 3 2 45889999999863
No 154
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=90.52 E-value=0.39 Score=54.25 Aligned_cols=106 Identities=12% Similarity=0.131 Sum_probs=64.1
Q ss_pred HHHHHhhcCeEEEEc-CChHHHHHHHHHHHh-CCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCC
Q 001074 171 ETMRRLFASNILVSG-MQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAV 248 (1163)
Q Consensus 171 e~q~kL~~s~VlIiG-~gglGsEiaKNLvla-GVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V 248 (1163)
.++..|+..+|||.| .|.+|+.+++.|... |. +|+++|...-....+.. .+
T Consensus 17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~------------------------~~-- 69 (372)
T 3slg_A 17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVK------------------------HE-- 69 (372)
T ss_dssp ------CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGG------------------------ST--
T ss_pred cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhcc------------------------CC--
Confidence 356667788999999 599999999999998 65 78888764321111100 11
Q ss_pred EEEEeecCCC-h-----hhcCCCcEEEEecC--Ch---------------hHHHHHHHHHHhcCCCceeEEeeecceeEE
Q 001074 249 VLSTLTSKLT-K-----EQLSDFQAVVFTDI--SL---------------DKAIEFDDFCHNHQPAISFIKAEVRGLFGS 305 (1163)
Q Consensus 249 ~V~~~~~~l~-~-----e~l~~fdvVI~~~~--~~---------------~~~~~ln~~cr~~~~~IpfI~~~~~G~~G~ 305 (1163)
.++....+++ + +.+.++|+||-+.. .. .....+-+.|++.+ ..||.+++.+.+|.
T Consensus 70 ~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~ 147 (372)
T 3slg_A 70 RMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGM 147 (372)
T ss_dssp TEEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBS
T ss_pred CeEEEeCccCCCHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCC
Confidence 3444445554 2 23456788886432 11 11135667888888 68898888877664
No 155
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.50 E-value=0.42 Score=52.30 Aligned_cols=85 Identities=19% Similarity=0.225 Sum_probs=52.3
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
.+++++|+|.| .||||.++++.|+..|. +++++|.+ ..|.+.+.+.+.+..+ -
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~-~ 62 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI------MVVLTCRD-------------------VTKGHEAVEKLKNSNH-E 62 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHTTTC-C
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHhcCC-C
Confidence 45677888888 58999999999999997 78887654 2355555666665543 2
Q ss_pred eEEEEeccCCccccc---ccc--hhhhccCCEEEEcc
Q 001074 651 NIEALQNRVGPETEN---VFD--DTFWENITCVINAL 682 (1163)
Q Consensus 651 ~I~~~~~~v~~~~e~---~~~--~~f~~~~DvVi~al 682 (1163)
++..+...+....+. ++. .+.+..+|++|++.
T Consensus 63 ~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nA 99 (311)
T 3o26_A 63 NVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNA 99 (311)
T ss_dssp SEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred ceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 566666666543111 110 01134677777763
No 156
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=90.44 E-value=0.84 Score=49.75 Aligned_cols=87 Identities=11% Similarity=0.044 Sum_probs=55.3
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~~ 655 (1163)
.+|.|||+|.+|+.+++.|+. |. +++++|.+. .|++.+++. .+.+ .
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~------~V~~~~~~~-------------------~~~~~~~~~------g~~~--~ 47 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF------PTLVWNRTF-------------------EKALRHQEE------FGSE--A 47 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS------CEEEECSST-------------------HHHHHHHHH------HCCE--E
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC------eEEEEeCCH-------------------HHHHHHHHC------CCcc--c
Confidence 479999999999999999999 97 688876432 133333221 1111 1
Q ss_pred eccCCcccccccchhhhccCCEEEEccCchH-HHHHHHhh--cccccccEEecCC
Q 001074 656 QNRVGPETENVFDDTFWENITCVINALDNVN-ARLYVDQR--CLYFQKPLLESGT 707 (1163)
Q Consensus 656 ~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~-aR~~v~~~--c~~~~~PlI~sgt 707 (1163)
. ..+...++|+||.|+-+.. .+..+... +...+..+++.++
T Consensus 48 ~-----------~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l~~~~~vv~~s~ 91 (289)
T 2cvz_A 48 V-----------PLERVAEARVIFTCLPTTREVYEVAEALYPYLREGTYWVDATS 91 (289)
T ss_dssp C-----------CGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCTTEEEEECSC
T ss_pred C-----------HHHHHhCCCEEEEeCCChHHHHHHHHHHHhhCCCCCEEEECCC
Confidence 0 1234568999999998765 55555433 2334666776554
No 157
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.39 E-value=1.2 Score=49.61 Aligned_cols=71 Identities=24% Similarity=0.305 Sum_probs=49.0
Q ss_pred eEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhc---CCCEEEEeec
Q 001074 180 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTLTS 255 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLN---p~V~V~~~~~ 255 (1163)
+|.|+|+|.+|..+|..|+..|. +.++|+|.+. .|++.....+...+ +.+++.. .
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~i~~--~ 60 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE-------------------DRAQAEAEDIAHAAPVSHGTRVWH--G 60 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH-------------------HHHHHHHHHHTTSCCTTSCCEEEE--E
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH-------------------HHHHHHHHhhhhhhhhcCCeEEEE--C
Confidence 79999999999999999999994 5799998642 13333333333333 3445554 2
Q ss_pred CCChhhcCCCcEEEEecC
Q 001074 256 KLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 256 ~l~~e~l~~fdvVI~~~~ 273 (1163)
+.+.+.+.|+||.+..
T Consensus 61 --~~~a~~~aDvVIi~~~ 76 (304)
T 2v6b_A 61 --GHSELADAQVVILTAG 76 (304)
T ss_dssp --CGGGGTTCSEEEECC-
T ss_pred --CHHHhCCCCEEEEcCC
Confidence 2356889999999874
No 158
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.33 E-value=0.29 Score=53.02 Aligned_cols=93 Identities=11% Similarity=0.118 Sum_probs=58.3
Q ss_pred HhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeE
Q 001074 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (1163)
Q Consensus 573 L~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I 652 (1163)
+.+.+|.|||+|.+|+.+++.|+..|. ..++++|.+. .+++.+++.+ .+.
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~-----~~v~~~~~~~-------------------~~~~~~~~~~-----g~~- 57 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGF-----RIVQVYSRTE-------------------ESARELAQKV-----EAE- 57 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTC-----CEEEEECSSH-------------------HHHHHHHHHT-----TCE-
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCC-----eEEEEEeCCH-------------------HHHHHHHHHc-----CCc-
Confidence 445799999999999999999999997 3377776432 1333232221 121
Q ss_pred EEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcc--cccccEEecC
Q 001074 653 EALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCL--YFQKPLLESG 706 (1163)
Q Consensus 653 ~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~--~~~~PlI~sg 706 (1163)
... +. .+.++++|+||.|+-+...+..+..... ..+..+++..
T Consensus 58 -~~~-----~~-----~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 58 -YTT-----DL-----AEVNPYAKLYIVSLKDSAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp -EES-----CG-----GGSCSCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEEECC
T ss_pred -eeC-----CH-----HHHhcCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEEECC
Confidence 111 11 2345689999999987776666654432 2455666543
No 159
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.22 E-value=0.74 Score=47.53 Aligned_cols=93 Identities=20% Similarity=0.151 Sum_probs=57.0
Q ss_pred CcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 576 AKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 576 ~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
.||+|.|+ |+||..+++.|+..|. ++++++.+. .|.. .+ .+.+ +.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~-------------------~~~~----~~---~~~~--~~ 46 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH------EVTAIVRNA-------------------GKIT----QT---HKDI--NI 46 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCS-------------------HHHH----HH---CSSS--EE
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC------EEEEEEcCc-------------------hhhh----hc---cCCC--eE
Confidence 37999995 9999999999999997 788876431 1111 11 1333 44
Q ss_pred EeccCCcccccccchhhhccCCEEEEccCc--------hHHHHHHHhhccccc-ccEEecCC
Q 001074 655 LQNRVGPETENVFDDTFWENITCVINALDN--------VNARLYVDQRCLYFQ-KPLLESGT 707 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~~~~DvVi~alDn--------~~aR~~v~~~c~~~~-~PlI~sgt 707 (1163)
+...+..... +.+.++|+||++... +..-..+-+.|...+ ..+|..++
T Consensus 47 ~~~D~~d~~~-----~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 47 LQKDIFDLTL-----SDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp EECCGGGCCH-----HHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred EeccccChhh-----hhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 4444443221 456789999998742 333345555666653 34554443
No 160
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.22 E-value=0.47 Score=53.69 Aligned_cols=37 Identities=22% Similarity=0.424 Sum_probs=31.6
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+++..||.|||+|.+|..++..|+..|+ +.|+++|-+
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~-----~~v~L~Di~ 40 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKEL-----GDVVLFDIA 40 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEeCC
Confidence 3557799999999999999999999998 589999854
No 161
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.16 E-value=0.37 Score=53.10 Aligned_cols=82 Identities=10% Similarity=0.166 Sum_probs=52.6
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
..||.|||+|.+|+.+++.|+..|. +..+++++|.+.- |++.+++. . .+ ..
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~---~~~~V~v~dr~~~-------------------~~~~l~~~----~-gi--~~ 53 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGY---DPNRICVTNRSLD-------------------KLDFFKEK----C-GV--HT 53 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTC---CGGGEEEECSSSH-------------------HHHHHHHT----T-CC--EE
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCC---CCCeEEEEeCCHH-------------------HHHHHHHH----c-CC--EE
Confidence 5789999999999999999999996 1257888875431 22222221 1 12 11
Q ss_pred EeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhc
Q 001074 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRC 695 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c 695 (1163)
. .+. .+..++.|+||-|+-....+..+.+..
T Consensus 54 ~-----~~~-----~~~~~~aDvVilav~p~~~~~vl~~l~ 84 (280)
T 3tri_A 54 T-----QDN-----RQGALNADVVVLAVKPHQIKMVCEELK 84 (280)
T ss_dssp E-----SCH-----HHHHSSCSEEEECSCGGGHHHHHHHHH
T ss_pred e-----CCh-----HHHHhcCCeEEEEeCHHHHHHHHHHHH
Confidence 1 111 245678999999997655555555443
No 162
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=90.14 E-value=0.37 Score=53.82 Aligned_cols=37 Identities=16% Similarity=0.239 Sum_probs=27.8
Q ss_pred HhcCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+..++|+|.|+ |.||..+++.|+..|-. -+++.+|..
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~----~~v~~~~~~ 59 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYET----YKIINFDAL 59 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTT----EEEEEEECC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCC----cEEEEEecc
Confidence 55678999997 99999999999999930 166666643
No 163
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=90.12 E-value=0.51 Score=49.21 Aligned_cols=90 Identities=8% Similarity=0.093 Sum_probs=54.4
Q ss_pred CcEEEEe-cCcchHHHHHHHH-HcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEE
Q 001074 576 AKVFIVG-SGALGCEFLKNVA-LMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (1163)
Q Consensus 576 ~kVlvVG-aGglGce~lknLa-~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~ 653 (1163)
++|+|.| .|+||.++++.|+ ..|. ++++++.+.-+ |.+. +....+ ++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~------~V~~~~r~~~~------------------~~~~----~~~~~~--~~~ 55 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM------HITLYGRQLKT------------------RIPP----EIIDHE--RVT 55 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC------EEEEEESSHHH------------------HSCH----HHHTST--TEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc------eEEEEecCccc------------------cchh----hccCCC--ceE
Confidence 3599999 5999999999999 8887 78887654210 1111 111222 455
Q ss_pred EEeccCCcccccccchhhhccCCEEEEccC--chHHHHHHHhhccccc
Q 001074 654 ALQNRVGPETENVFDDTFWENITCVINALD--NVNARLYVDQRCLYFQ 699 (1163)
Q Consensus 654 ~~~~~v~~~~e~~~~~~f~~~~DvVi~alD--n~~aR~~v~~~c~~~~ 699 (1163)
.+...+.+.. .+ ...++++|+||++.. |+.++..+. .|...+
T Consensus 56 ~~~~D~~d~~-~~--~~~~~~~d~vv~~ag~~n~~~~~~~~-~~~~~~ 99 (221)
T 3r6d_A 56 VIEGSFQNPG-XL--EQAVTNAEVVFVGAMESGSDMASIVK-ALSRXN 99 (221)
T ss_dssp EEECCTTCHH-HH--HHHHTTCSEEEESCCCCHHHHHHHHH-HHHHTT
T ss_pred EEECCCCCHH-HH--HHHHcCCCEEEEcCCCCChhHHHHHH-HHHhcC
Confidence 6666665322 12 345678999999886 444333333 444444
No 164
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.04 E-value=0.39 Score=52.81 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=29.4
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
.||.|||+|.+|+.++++|+..|. +++++|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~------~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC------SVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC------eEEEEcCCH
Confidence 589999999999999999999997 788887653
No 165
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=89.94 E-value=1.2 Score=46.19 Aligned_cols=91 Identities=14% Similarity=0.165 Sum_probs=59.8
Q ss_pred eEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCCC
Q 001074 180 NILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 258 (1163)
Q Consensus 180 ~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l~ 258 (1163)
+|+|.| .|++|.++++.|+..|. ++++++.+.-....+ + .++....+++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---------------------------~--~~~~~~~D~~ 51 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY---------------------------N--NVKAVHFDVD 51 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC---------------------------T--TEEEEECCTT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc---------------------------C--CceEEEeccc
Confidence 699998 79999999999999995 788888654222111 1 2334444443
Q ss_pred h------hhcCCCcEEEEecC---------ChhHHHHHHHHHHhcCCCc-eeEEeeecce
Q 001074 259 K------EQLSDFQAVVFTDI---------SLDKAIEFDDFCHNHQPAI-SFIKAEVRGL 302 (1163)
Q Consensus 259 ~------e~l~~fdvVI~~~~---------~~~~~~~ln~~cr~~~~~I-pfI~~~~~G~ 302 (1163)
+ +.+.++|+||.+.. +......+-+.|++.+ + .||..++.+.
T Consensus 52 d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS~~~ 109 (219)
T 3dqp_A 52 WTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE--VKRFILLSTIFS 109 (219)
T ss_dssp SCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTT--CCEEEEECCTTT
T ss_pred CCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhC--CCEEEEECcccc
Confidence 2 24567888887654 3344567778888877 4 5666666443
No 166
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=89.85 E-value=0.48 Score=52.13 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=28.7
Q ss_pred cCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 575 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 575 ~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.++|+|.| .|.||..+++.|+..|. ++++++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN------TPIILTRS 35 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC------EEEEEeCC
Confidence 46899999 69999999999999997 78888765
No 167
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=89.84 E-value=0.51 Score=51.85 Aligned_cols=31 Identities=32% Similarity=0.350 Sum_probs=27.6
Q ss_pred cEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 577 KVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 577 kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+|.|||+|.+|+.+++.|+..|. +++++|.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 79999999999999999999987 78888653
No 168
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.82 E-value=0.32 Score=56.91 Aligned_cols=91 Identities=16% Similarity=0.194 Sum_probs=61.8
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
+.+|+|+|+|-+|..+++.|...|+ .+++||.|.- +++. +++. .+ .+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~------~vvvId~d~~-------------------~v~~----~~~~--g~--~v 50 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV------KMVVLDHDPD-------------------HIET----LRKF--GM--KV 50 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC------CEEEEECCHH-------------------HHHH----HHHT--TC--CC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC------CEEEEECCHH-------------------HHHH----HHhC--CC--eE
Confidence 4589999999999999999999998 8999998743 1111 2221 11 22
Q ss_pred EeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccc
Q 001074 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQK 700 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~ 700 (1163)
+....+. ...+...-++++|+||.|+++...-..+-..++..+.
T Consensus 51 i~GDat~--~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 51 FYGDATR--MDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP 94 (413)
T ss_dssp EESCTTC--HHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT
T ss_pred EEcCCCC--HHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCC
Confidence 3333222 1122222357899999999999888888888777653
No 169
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.81 E-value=0.72 Score=51.17 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=29.3
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
..+|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~------~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL------STWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC------eEEEEECC
Confidence 4689999999999999999999997 78888754
No 170
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=89.78 E-value=0.74 Score=50.72 Aligned_cols=81 Identities=16% Similarity=0.161 Sum_probs=52.2
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCC--eEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 177 FASNILVSGMQGLGAEIAKNLILAGVK--SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 177 ~~s~VlIiG~gglGsEiaKNLvlaGVg--~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
...+|.|||+|.+|..++++|+..|.. .|+++|.+. .+++.+.+++ .+. ...
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~-------------------~~~~~l~~~~-----gi~--~~~ 55 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL-------------------DKLDFFKEKC-----GVH--TTQ 55 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS-------------------HHHHHHHHTT-----CCE--EES
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH-------------------HHHHHHHHHc-----CCE--EeC
Confidence 457899999999999999999999962 688887532 1333222221 122 211
Q ss_pred cCCChhhcCCCcEEEEecCChhHHHHHHHHH
Q 001074 255 SKLTKEQLSDFQAVVFTDISLDKAIEFDDFC 285 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~~~~~~~~ln~~c 285 (1163)
+ ..+.+.+.|+||.|..+......+.++.
T Consensus 56 ~--~~~~~~~aDvVilav~p~~~~~vl~~l~ 84 (280)
T 3tri_A 56 D--NRQGALNADVVVLAVKPHQIKMVCEELK 84 (280)
T ss_dssp C--HHHHHSSCSEEEECSCGGGHHHHHHHHH
T ss_pred C--hHHHHhcCCeEEEEeCHHHHHHHHHHHH
Confidence 1 2356778999999986544444455543
No 171
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.75 E-value=1.6 Score=49.04 Aligned_cols=71 Identities=18% Similarity=0.236 Sum_probs=49.1
Q ss_pred eEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhc---CCCEEEEeec
Q 001074 180 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTLTS 255 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLN---p~V~V~~~~~ 255 (1163)
+|.|+|+|.+|+.+|..|+..|. +.++++|.+. .+++.....+.... +.+.+.. .
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~i~~--~ 60 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK-------------------KRAEGDALDLIHGTPFTRRANIYA--G 60 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHGGGSCCCEEEE--C
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCcEEEe--C
Confidence 79999999999999999999995 5799988532 23333333333222 3445544 2
Q ss_pred CCChhhcCCCcEEEEecC
Q 001074 256 KLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 256 ~l~~e~l~~fdvVI~~~~ 273 (1163)
+.+.+.+.|+||.|..
T Consensus 61 --d~~~~~~aDvViiav~ 76 (319)
T 1a5z_A 61 --DYADLKGSDVVIVAAG 76 (319)
T ss_dssp --CGGGGTTCSEEEECCC
T ss_pred --CHHHhCCCCEEEEccC
Confidence 2456789999999875
No 172
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.75 E-value=0.59 Score=51.26 Aligned_cols=71 Identities=11% Similarity=0.256 Sum_probs=50.3
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~ 255 (1163)
++.++|+|+|+||+|..++..|...| .++++++.+. .|++.+++.+.... .+....
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R~~-------------------~~a~~l~~~~~~~~---~~~~~~- 172 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTF-------------------SKTKELAERFQPYG---NIQAVS- 172 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSH-------------------HHHHHHHHHHGGGS---CEEEEE-
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECCH-------------------HHHHHHHHHccccC---CeEEee-
Confidence 56789999999999999999999999 8999988532 36666666654321 222221
Q ss_pred CCChhhc--CCCcEEEEecC
Q 001074 256 KLTKEQL--SDFQAVVFTDI 273 (1163)
Q Consensus 256 ~l~~e~l--~~fdvVI~~~~ 273 (1163)
+ +.+ .++|+||.|+.
T Consensus 173 -~--~~~~~~~~DivIn~t~ 189 (272)
T 1p77_A 173 -M--DSIPLQTYDLVINATS 189 (272)
T ss_dssp -G--GGCCCSCCSEEEECCC
T ss_pred -H--HHhccCCCCEEEECCC
Confidence 1 122 37899998875
No 173
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.70 E-value=0.45 Score=51.53 Aligned_cols=97 Identities=10% Similarity=0.004 Sum_probs=59.8
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
.++|+|.|||.||..+++.|+..|. ++++++.+. .+...+ .. + .++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~------~V~~~~r~~-------------------~~~~~~----~~--~--~~~~ 51 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW------RIIGTSRNP-------------------DQMEAI----RA--S--GAEP 51 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC------EEEEEESCG-------------------GGHHHH----HH--T--TEEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC------EEEEEEcCh-------------------hhhhhH----hh--C--CCeE
Confidence 4789999999999999999999987 777775432 111111 11 2 3555
Q ss_pred EeccCCcccccccchhhhccCCEEEEccCch----HHHHHHHhhccc--cc-ccEEecCCCCccc
Q 001074 655 LQNRVGPETENVFDDTFWENITCVINALDNV----NARLYVDQRCLY--FQ-KPLLESGTLGAKC 712 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~----~aR~~v~~~c~~--~~-~PlI~sgt~G~~G 712 (1163)
+...+.. + + +.++|+||++.... .....+-+.|.. .+ +.+|..++.+..|
T Consensus 52 ~~~D~~d-----~--~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 52 LLWPGEE-----P--S-LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYG 108 (286)
T ss_dssp EESSSSC-----C--C-CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGC
T ss_pred EEecccc-----c--c-cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecC
Confidence 5555543 1 1 67899999988421 223344455655 33 3466666555444
No 174
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.66 E-value=1 Score=48.32 Aligned_cols=39 Identities=23% Similarity=0.198 Sum_probs=31.2
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 173 MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 173 q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
...+...+|.|||+|.+|..+|++|+..|. .++++|.+.
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~ 52 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDP 52 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCh
Confidence 457889999999999999999999999996 799998653
No 175
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.62 E-value=0.89 Score=49.88 Aligned_cols=90 Identities=13% Similarity=0.131 Sum_probs=56.7
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~~ 655 (1163)
.+|.|||+|.+|+.++++|+..|. +++++|.+.- |++.+++. .+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~------~V~~~dr~~~-------------------~~~~~~~~------g~~---- 46 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF------DVTVWNRNPA-------------------KCAPLVAL------GAR---- 46 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC------CEEEECSSGG-------------------GGHHHHHH------TCE----
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC------eEEEEcCCHH-------------------HHHHHHHC------CCe----
Confidence 479999999999999999999997 7888875532 22222221 111
Q ss_pred eccCCcccccccchhhhccCCEEEEccCch-HHHHHH---Hhhc--ccccccEEecCCC
Q 001074 656 QNRVGPETENVFDDTFWENITCVINALDNV-NARLYV---DQRC--LYFQKPLLESGTL 708 (1163)
Q Consensus 656 ~~~v~~~~e~~~~~~f~~~~DvVi~alDn~-~aR~~v---~~~c--~~~~~PlI~sgt~ 708 (1163)
...+. .+..++.|+||.|+-+. ..+..+ .... ...+..+|+.++.
T Consensus 47 ---~~~~~-----~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~ 97 (287)
T 3pdu_A 47 ---QASSP-----AEVCAACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTV 97 (287)
T ss_dssp ---ECSCH-----HHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCC
T ss_pred ---ecCCH-----HHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCC
Confidence 11111 34567899999999765 555555 3222 2345566766653
No 176
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.45 E-value=0.54 Score=53.06 Aligned_cols=35 Identities=20% Similarity=0.387 Sum_probs=31.3
Q ss_pred hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
...||.|||+|.+|..++..|+..|+ +.|+++|.+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~-----~~v~l~Di~ 38 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQL-----GDVVLFDIA 38 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCC
Confidence 45799999999999999999999998 589999865
No 177
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=89.40 E-value=0.74 Score=48.69 Aligned_cols=101 Identities=15% Similarity=0.112 Sum_probs=60.0
Q ss_pred hcCcEEEEe-cCcchHHHHHHHHHcc-cccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 574 EDAKVFIVG-SGALGCEFLKNVALMG-VSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 574 ~~~kVlvVG-aGglGce~lknLa~~G-v~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
..++|+|.| .|+||.++++.|+..| . ++++++.+.-....+ . . -.
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~------~V~~~~R~~~~~~~~-----~--------------------~--~~ 68 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTI------KQTLFARQPAKIHKP-----Y--------------------P--TN 68 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTE------EEEEEESSGGGSCSS-----C--------------------C--TT
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCc------eEEEEEcChhhhccc-----c--------------------c--CC
Confidence 346899999 6999999999999999 5 788877553211111 0 0 13
Q ss_pred EEEEeccCCcccccccchhhhccCCEEEEccCchHHH---HHHHhhcccccc-cEEecCCCCc
Q 001074 652 IEALQNRVGPETENVFDDTFWENITCVINALDNVNAR---LYVDQRCLYFQK-PLLESGTLGA 710 (1163)
Q Consensus 652 I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR---~~v~~~c~~~~~-PlI~sgt~G~ 710 (1163)
++.+...+.+. +.+ ...++++|+||++....... ..+-..|...+. .+|..++.+.
T Consensus 69 ~~~~~~Dl~d~-~~~--~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 69 SQIIMGDVLNH-AAL--KQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp EEEEECCTTCH-HHH--HHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred cEEEEecCCCH-HHH--HHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEeccee
Confidence 55565555532 111 34567899999877543221 233444555553 3555555443
No 178
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=89.37 E-value=0.68 Score=50.59 Aligned_cols=36 Identities=28% Similarity=0.493 Sum_probs=30.5
Q ss_pred HHhcCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~------~V~~~~r~ 61 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGA------HVVVTARS 61 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 466788999985 8999999999999997 78887653
No 179
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=89.21 E-value=0.77 Score=51.24 Aligned_cols=37 Identities=19% Similarity=0.453 Sum_probs=29.0
Q ss_pred HHHhcCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 571 KKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 571 ~kL~~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
..+..++|+|.|+ |.||..+++.|+..|. +++++|..
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 60 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGH------EVTVVDNF 60 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 4567789999996 9999999999999986 78887653
No 180
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=89.21 E-value=0.92 Score=51.16 Aligned_cols=80 Identities=19% Similarity=0.270 Sum_probs=53.4
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHc-ccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~-Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
+++++|+|.| +|+||.++++.|+.. |. .+++++|.+. .|...+++.+. .-
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~-----~~V~~~~r~~-------------------~~~~~~~~~~~----~~ 70 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNA-----KKIIVYSRDE-------------------LKQSEMAMEFN----DP 70 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCC-----SEEEEEESCH-------------------HHHHHHHHHHC----CT
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCC-----CEEEEEECCh-------------------hhHHHHHHHhc----CC
Confidence 4578999999 599999999999999 87 6888876542 23333333332 23
Q ss_pred eEEEEeccCCcccccccchhhhccCCEEEEccC
Q 001074 651 NIEALQNRVGPETENVFDDTFWENITCVINALD 683 (1163)
Q Consensus 651 ~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alD 683 (1163)
.+..+...+.... .+ ...++++|+||++..
T Consensus 71 ~v~~~~~Dl~d~~-~l--~~~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 71 RMRFFIGDVRDLE-RL--NYALEGVDICIHAAA 100 (344)
T ss_dssp TEEEEECCTTCHH-HH--HHHTTTCSEEEECCC
T ss_pred CEEEEECCCCCHH-HH--HHHHhcCCEEEECCC
Confidence 4666666665421 11 345678999999874
No 181
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.12 E-value=0.35 Score=53.29 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=31.0
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
+++|+|+|+||.|..++..|...| .+|+|++.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 789999999999999999999999 999998754
No 182
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.12 E-value=0.45 Score=51.17 Aligned_cols=81 Identities=11% Similarity=0.185 Sum_probs=49.4
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~~ 655 (1163)
.||.|||+|.+|..++++|+..|.. +..+++++|.+. .|++.+++.. . +. .
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~--~~~~V~~~~r~~-------------------~~~~~~~~~~---g--~~--~- 53 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIV--SSNQIICSDLNT-------------------ANLKNASEKY---G--LT--T- 53 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSS--CGGGEEEECSCH-------------------HHHHHHHHHH---C--CE--E-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCC--CCCeEEEEeCCH-------------------HHHHHHHHHh---C--CE--E-
Confidence 5899999999999999999999851 113677776431 2333333322 1 11 1
Q ss_pred eccCCcccccccchhhhccCCEEEEccCchHHHHHHHhh
Q 001074 656 QNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQR 694 (1163)
Q Consensus 656 ~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~ 694 (1163)
..+. .+..++.|+||-|+.....+..+...
T Consensus 54 ----~~~~-----~e~~~~aDvVilav~~~~~~~v~~~l 83 (247)
T 3gt0_A 54 ----TTDN-----NEVAKNADILILSIKPDLYASIINEI 83 (247)
T ss_dssp ----CSCH-----HHHHHHCSEEEECSCTTTHHHHC---
T ss_pred ----eCCh-----HHHHHhCCEEEEEeCHHHHHHHHHHH
Confidence 1111 24467899999999655555555443
No 183
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.06 E-value=1.5 Score=49.37 Aligned_cols=72 Identities=17% Similarity=0.235 Sum_probs=52.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhc---CCCEEEEee
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTLT 254 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLN---p~V~V~~~~ 254 (1163)
.||.|+|+|++|..++-.|+..|. .+|.|+|- -..|++..+..|.... +.+++..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di-------------------~~~~~~g~~~dl~~~~~~~~~~~v~~-- 64 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV-------------------VKDRTKGDALDLEDAQAFTAPKKIYS-- 64 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS-------------------SHHHHHHHHHHHHGGGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC-------------------CchHHHHHHHHHHHHHHhcCCeEEEE--
Confidence 689999999999999999999884 57888884 1235665555555443 4455554
Q ss_pred cCCChhhcCCCcEEEEecC
Q 001074 255 SKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~ 273 (1163)
. +.+.+.+.|+||.+..
T Consensus 65 ~--~~~a~~~aDvVii~ag 81 (318)
T 1ez4_A 65 G--EYSDCKDADLVVITAG 81 (318)
T ss_dssp C--CGGGGTTCSEEEECCC
T ss_pred C--CHHHhCCCCEEEECCC
Confidence 2 3456889999999865
No 184
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=89.05 E-value=0.64 Score=52.09 Aligned_cols=114 Identities=11% Similarity=0.097 Sum_probs=65.0
Q ss_pred HHhcCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhh-CCC
Q 001074 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSI-NPR 649 (1163)
Q Consensus 572 kL~~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~-np~ 649 (1163)
.+..++|+|.|+ |.||..+++.|+..|. +++++|...-. ...+...+.+.+... .+
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~~- 81 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQ------KVVGLDNFATG---------------HQRNLDEVRSLVSEKQWS- 81 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECCSSC---------------CHHHHHHHHHHSCHHHHT-
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCCCcc---------------chhhHHHHhhhcccccCC-
Confidence 366789999997 9999999999999986 78887643210 011111122211110 12
Q ss_pred CeEEEEeccCCcccccccchhhhccCCEEEEccCc-----------------hHHHHHHHhhcccccc-cEEecCCCCcc
Q 001074 650 LNIEALQNRVGPETENVFDDTFWENITCVINALDN-----------------VNARLYVDQRCLYFQK-PLLESGTLGAK 711 (1163)
Q Consensus 650 ~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn-----------------~~aR~~v~~~c~~~~~-PlI~sgt~G~~ 711 (1163)
+++.+...+... +.+ .+.++++|+||++... +..-..+-+.|...++ .+|..++.+..
T Consensus 82 -~~~~~~~Dl~d~-~~~--~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~ 157 (352)
T 1sb8_A 82 -NFKFIQGDIRNL-DDC--NNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTY 157 (352)
T ss_dssp -TEEEEECCTTSH-HHH--HHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGG
T ss_pred -ceEEEECCCCCH-HHH--HHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhc
Confidence 455565555532 111 3456789999998652 1222345556666654 36655554433
No 185
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=89.04 E-value=2.6 Score=46.49 Aligned_cols=107 Identities=12% Similarity=0.059 Sum_probs=63.1
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEe-
Q 001074 176 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL- 253 (1163)
Q Consensus 176 L~~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~- 253 (1163)
+.+.+|||.|+ |++|+++++.|+..|. +|++++.+. .+.+.+.+.+.+..+ -.++..
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~-~~~~~~~ 67 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSA-------------------SKLANLQKRWDAKYP-GRFETAV 67 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSH-------------------HHHHHHHHHHHHHST-TTEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCc-------------------ccHHHHHHHhhccCC-CceEEEE
Confidence 34678999996 9999999999999996 677766421 133333344433332 234444
Q ss_pred ecCCCh-----hhcCCCcEEEEecC------Chh--------HHHHHHHHHHh-cCCCceeEEeeecceeE
Q 001074 254 TSKLTK-----EQLSDFQAVVFTDI------SLD--------KAIEFDDFCHN-HQPAISFIKAEVRGLFG 304 (1163)
Q Consensus 254 ~~~l~~-----e~l~~fdvVI~~~~------~~~--------~~~~ln~~cr~-~~~~IpfI~~~~~G~~G 304 (1163)
..++++ +.+.+.|+||.+.. +.. ....+-+.|++ .+ ...||.+++.+.+|
T Consensus 68 ~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~ 137 (342)
T 1y1p_A 68 VEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSAL 137 (342)
T ss_dssp CSCTTSTTTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTC
T ss_pred ecCCcChHHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhc
Confidence 444432 34567899997643 111 22345566764 33 13677777665543
No 186
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=89.00 E-value=0.56 Score=52.50 Aligned_cols=35 Identities=20% Similarity=0.459 Sum_probs=30.0
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++|+|.| .||||.++++.|+..|. +++++|.+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~------~Vv~~~r~ 41 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC------KVAIADIR 41 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC------EEEEEECC
Confidence 5677899998 58999999999999998 78888754
No 187
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.99 E-value=0.94 Score=48.98 Aligned_cols=97 Identities=9% Similarity=0.042 Sum_probs=63.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l 257 (1163)
..+|+|.|+|.+|+.+++.|...|. +|+.++.+. .++. .+.. + .++....++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~----~~~~--~--~~~~~~~D~ 56 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNP-------------------DQME----AIRA--S--GAEPLLWPG 56 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCG-------------------GGHH----HHHH--T--TEEEEESSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcCh-------------------hhhh----hHhh--C--CCeEEEecc
Confidence 3689999999999999999999996 677765422 1111 1222 2 244444444
Q ss_pred Ch-hhcCCCcEEEEecCC----hhHHHHHHHHHHh--cCCCceeEEeeecceeE
Q 001074 258 TK-EQLSDFQAVVFTDIS----LDKAIEFDDFCHN--HQPAISFIKAEVRGLFG 304 (1163)
Q Consensus 258 ~~-e~l~~fdvVI~~~~~----~~~~~~ln~~cr~--~~~~IpfI~~~~~G~~G 304 (1163)
++ + +.++|+||.+... ......+-+.|++ .+ ...||.+++.+.+|
T Consensus 57 ~d~~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 57 EEPS-LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQ-FRWVGYLSTTAVYG 108 (286)
T ss_dssp SCCC-CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGG-CSEEEEEEEGGGGC
T ss_pred cccc-cCCCCEEEECCCccccccHHHHHHHHHHHhhcCC-ceEEEEeecceecC
Confidence 32 2 7789999987642 2234566677777 44 13688888888776
No 188
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=88.95 E-value=0.35 Score=52.26 Aligned_cols=63 Identities=14% Similarity=0.268 Sum_probs=44.9
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
.+.+++|+|.| .||||.++++.|+..|. +++++|.+ ..+.+.+.+.+.+..+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~~~~~~~-- 78 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGA------RVVLTARD-------------------VEKLRAVEREIVAAGG-- 78 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEECC-------------------HHHHHHHHHHHHHhCC--
Confidence 46788899998 68999999999999998 78888753 2345555555655443
Q ss_pred eEEEEeccCCc
Q 001074 651 NIEALQNRVGP 661 (1163)
Q Consensus 651 ~I~~~~~~v~~ 661 (1163)
++..+...+..
T Consensus 79 ~~~~~~~D~~~ 89 (262)
T 3rkr_A 79 EAESHACDLSH 89 (262)
T ss_dssp EEEEEECCTTC
T ss_pred ceeEEEecCCC
Confidence 56666655553
No 189
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=88.95 E-value=1.4 Score=46.46 Aligned_cols=98 Identities=11% Similarity=0.097 Sum_probs=60.9
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 178 ASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 178 ~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
.++|+|.| .|++|.++++.|+..|--++++++.+.-....+.. + .+.....+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~-------------------------~--~~~~~~~D 75 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-------------------------T--NSQIIMGD 75 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC-------------------------T--TEEEEECC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc-------------------------C--CcEEEEec
Confidence 35899999 68999999999999994478888765422211110 1 23444455
Q ss_pred CCh-----hhcCCCcEEEEecCChh---HHHHHHHHHHhcCCCc-eeEEeeecceeE
Q 001074 257 LTK-----EQLSDFQAVVFTDISLD---KAIEFDDFCHNHQPAI-SFIKAEVRGLFG 304 (1163)
Q Consensus 257 l~~-----e~l~~fdvVI~~~~~~~---~~~~ln~~cr~~~~~I-pfI~~~~~G~~G 304 (1163)
+++ ..+.+.|+||.+..... ....+-+.|++.+ + .+|..++.+.++
T Consensus 76 l~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~--~~~iV~iSS~~~~~ 130 (236)
T 3qvo_A 76 VLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACD--VKRLIFVLSLGIYD 130 (236)
T ss_dssp TTCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTT--CCEEEEECCCCC--
T ss_pred CCCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcC--CCEEEEEecceecC
Confidence 532 24667899987654322 2235566777776 4 477777766554
No 190
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.94 E-value=0.43 Score=52.76 Aligned_cols=75 Identities=16% Similarity=0.206 Sum_probs=50.9
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhc--C-CCEEE
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN--N-AVVLS 251 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLN--p-~V~V~ 251 (1163)
.+++++|+|+|+||+|..+++.|+..| +|+++|.+. .|++.+++.+.... . .+.+.
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r~~-------------------~~~~~l~~~~~~~~~~~~~~~~d 183 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTV-------------------EKAEALAKEIAEKLNKKFGEEVK 183 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSH-------------------HHHHHHHHHHHHHHTCCHHHHEE
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC--CEEEEECCH-------------------HHHHHHHHHHhhhcccccceeEE
Confidence 367889999999999999999999999 999987421 35556655554321 0 11222
Q ss_pred EeecCCChhhcCCCcEEEEecC
Q 001074 252 TLTSKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 252 ~~~~~l~~e~l~~fdvVI~~~~ 273 (1163)
... + .+.+.++|+||.+..
T Consensus 184 ~~~--~-~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 184 FSG--L-DVDLDGVDIIINATP 202 (287)
T ss_dssp EEC--T-TCCCTTCCEEEECSC
T ss_pred Eee--H-HHhhCCCCEEEECCC
Confidence 221 2 345667888888764
No 191
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=88.93 E-value=0.38 Score=52.79 Aligned_cols=37 Identities=22% Similarity=0.408 Sum_probs=30.1
Q ss_pred HHhcCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 572 kL~~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
.+..++|+|.|+ |.||..+++.|+..|. +++++|...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE------EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC------CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC------EEEEEecCC
Confidence 356789999997 9999999999999997 888887654
No 192
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=88.90 E-value=0.86 Score=49.68 Aligned_cols=65 Identities=12% Similarity=0.192 Sum_probs=44.9
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCC-
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR- 649 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~- 649 (1163)
.+.+++++|.| +||||.++++.|+..|. +++++|.+. .+.+.+++.+.+..+.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~ 62 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA------SVMIVGRNP-------------------DKLAGAVQELEALGANG 62 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHTTCCSS
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHHhCCCC
Confidence 56788999998 78999999999999997 788887542 2444455555554331
Q ss_pred CeEEEEeccCCc
Q 001074 650 LNIEALQNRVGP 661 (1163)
Q Consensus 650 ~~I~~~~~~v~~ 661 (1163)
.++..+...+..
T Consensus 63 ~~~~~~~~Dv~~ 74 (281)
T 3svt_A 63 GAIRYEPTDITN 74 (281)
T ss_dssp CEEEEEECCTTS
T ss_pred ceEEEEeCCCCC
Confidence 255555555553
No 193
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.90 E-value=0.82 Score=51.74 Aligned_cols=75 Identities=21% Similarity=0.272 Sum_probs=51.9
Q ss_pred hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCC---CC
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINP---RL 650 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np---~~ 650 (1163)
...||.|+|+|.+|..++..|+..|+. +.|+++|.+ ..|++..+.-+....| .+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~----~el~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~ 64 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIA----QEIGIVDIF-------------------KDKTKGDAIDLEDALPFTSPK 64 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEeCC-------------------hHHHHHHHhhHhhhhhhcCCc
Confidence 456899999999999999999999984 589998753 2356655555655443 33
Q ss_pred eEEEEeccCCcccccccchhhhccCCEEEEccC
Q 001074 651 NIEALQNRVGPETENVFDDTFWENITCVINALD 683 (1163)
Q Consensus 651 ~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alD 683 (1163)
++. ... .+-+++.|+||.+..
T Consensus 65 ~i~--~~~----------~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 65 KIY--SAE----------YSDAKDADLVVITAG 85 (326)
T ss_dssp EEE--ECC----------GGGGTTCSEEEECCC
T ss_pred EEE--ECc----------HHHhcCCCEEEECCC
Confidence 332 110 233678999988743
No 194
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=88.87 E-value=0.65 Score=49.33 Aligned_cols=36 Identities=14% Similarity=0.314 Sum_probs=30.9
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~------~V~~~~r~ 47 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA------SVVLLGRT 47 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEecC
Confidence 46788899998 58999999999999997 78888754
No 195
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=88.84 E-value=1.4 Score=48.49 Aligned_cols=94 Identities=20% Similarity=0.204 Sum_probs=59.7
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 178 ASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 178 ~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
..+|+|.| .|.+|+.+++.|...|. +|+.++...-.. .+. .++....+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~-----------------------------~~~~~~~D 50 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNK-AIN-----------------------------DYEYRVSD 50 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC-----------------------------------CCEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCcc-cCC-----------------------------ceEEEEcc
Confidence 36899999 58999999999999996 788877651110 011 12222233
Q ss_pred CCh----hhcCCCcEEEEecC-------------ChhHHHHHHHHHHhcCCCce-eEEeeecceeE
Q 001074 257 LTK----EQLSDFQAVVFTDI-------------SLDKAIEFDDFCHNHQPAIS-FIKAEVRGLFG 304 (1163)
Q Consensus 257 l~~----e~l~~fdvVI~~~~-------------~~~~~~~ln~~cr~~~~~Ip-fI~~~~~G~~G 304 (1163)
++. +.+.++|+||.+.. +......+-+.|++.+ ++ ||.+++.+.+|
T Consensus 51 l~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 51 YTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENN--ISNIVYASTISAYS 114 (311)
T ss_dssp CCHHHHHHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGCC
T ss_pred ccHHHHHHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHhC
Confidence 321 23456777776532 1223456778888888 65 88888877766
No 196
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=88.82 E-value=0.66 Score=49.99 Aligned_cols=63 Identities=21% Similarity=0.272 Sum_probs=43.8
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
.|++++++|.| .||||.++++.|+..|. +++++|.+. .+.+.+++.+.+..+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~-- 61 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGA------SVVVTDLKS-------------------EGAEAVAAAIRQAGG-- 61 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTC------EEEEEESSH-------------------HHHHHHHHHHHHTTC--
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhcCC--
Confidence 36678888887 68999999999999998 788887532 244555555555443
Q ss_pred eEEEEeccCCc
Q 001074 651 NIEALQNRVGP 661 (1163)
Q Consensus 651 ~I~~~~~~v~~ 661 (1163)
++..+...+..
T Consensus 62 ~~~~~~~Dv~d 72 (256)
T 3gaf_A 62 KAIGLECNVTD 72 (256)
T ss_dssp CEEEEECCTTC
T ss_pred cEEEEECCCCC
Confidence 45555555553
No 197
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.79 E-value=0.33 Score=53.01 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=32.0
Q ss_pred HhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+++ +++|+|+||.|..++..|+..|+ .+|+|+|.+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~-----~~I~v~nR~ 141 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGV-----KDIWVVNRT 141 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTC-----CCEEEEESC
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCC-----CEEEEEeCC
Confidence 567 99999999999999999999999 899998765
No 198
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.78 E-value=1.3 Score=48.14 Aligned_cols=83 Identities=14% Similarity=0.036 Sum_probs=51.6
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCCCh
Q 001074 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLTK 259 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l~~ 259 (1163)
+|+|+|+|.+|+.+|.+|..+|. .++++|.+.-....+... ..-|. ......... +.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~l~~~-----~~~~~---------------~~~~~~~~~--~~ 58 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLV-----ETDGS---------------IFNESLTAN--DP 58 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEE-----CTTSC---------------EEEEEEEES--CH
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCccceeeEEEE-----cCCCc---------------eeeeeeeec--Cc
Confidence 79999999999999999999996 899998754222221110 00010 011111111 24
Q ss_pred hhcCCCcEEEEecCChhHHHHHHHHH
Q 001074 260 EQLSDFQAVVFTDISLDKAIEFDDFC 285 (1163)
Q Consensus 260 e~l~~fdvVI~~~~~~~~~~~ln~~c 285 (1163)
+.+.++|+||+|..+......+.++.
T Consensus 59 ~~~~~~d~vi~~v~~~~~~~v~~~l~ 84 (291)
T 1ks9_A 59 DFLATSDLLLVTLKAWQVSDAVKSLA 84 (291)
T ss_dssp HHHHTCSEEEECSCGGGHHHHHHHHH
T ss_pred cccCCCCEEEEEecHHhHHHHHHHHH
Confidence 56678999999987665544444443
No 199
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.74 E-value=0.25 Score=50.36 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=31.5
Q ss_pred HhcCcEEEEecCcchHHHHHHHHHc-ccccCCCccEEEecCCc
Q 001074 573 LEDAKVFIVGSGALGCEFLKNVALM-GVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 573 L~~~kVlvVGaGglGce~lknLa~~-Gv~~~~~g~i~ivD~D~ 614 (1163)
+.+.+|+|+|+|.+|..+++.|... |. .++++|.|.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~------~V~vid~~~ 73 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK------ISLGIEIRE 73 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS------CEEEEESCH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC------eEEEEECCH
Confidence 4577999999999999999999999 97 789988653
No 200
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=88.73 E-value=0.72 Score=52.56 Aligned_cols=77 Identities=16% Similarity=0.190 Sum_probs=52.2
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHh-cCCCEEEE
Q 001074 176 LFASNILVSGM-QGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLST 252 (1163)
Q Consensus 176 L~~s~VlIiG~-gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eL-Np~V~V~~ 252 (1163)
|...||.|+|+ |.+|+.+|..|+..|. ..+.|+|-+ ..|++..+.-|+.. .|...+..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~-------------------~~k~~g~a~DL~~~~~~~~~i~~ 66 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF-------------------AVGLEGVAEEIRHCGFEGLNLTF 66 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC-------------------HHHHHHHHHHHHHHCCTTCCCEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC-------------------chhHHHHHHhhhhCcCCCCceEE
Confidence 45679999997 9999999999999997 589999842 23555544445443 23333332
Q ss_pred eecCCChhhcCCCcEEEEecC
Q 001074 253 LTSKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 253 ~~~~l~~e~l~~fdvVI~~~~ 273 (1163)
.. + ..+.+.+.|+||.|..
T Consensus 67 t~-d-~~~al~dADvVvitaG 85 (343)
T 3fi9_A 67 TS-D-IKEALTDAKYIVSSGG 85 (343)
T ss_dssp ES-C-HHHHHTTEEEEEECCC
T ss_pred cC-C-HHHHhCCCCEEEEccC
Confidence 21 1 1245789999998854
No 201
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=88.73 E-value=1.6 Score=48.45 Aligned_cols=36 Identities=22% Similarity=0.293 Sum_probs=30.3
Q ss_pred HhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 175 RLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 175 kL~~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
.+.+.+|||.|+ |++|.++++.|+..|. +|+++|..
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNF 53 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 345678999996 9999999999999995 78888864
No 202
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=88.72 E-value=1.4 Score=49.72 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=50.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHH----HhcCCCEEEEee
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQ----ELNNAVVLSTLT 254 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~----eLNp~V~V~~~~ 254 (1163)
.+|.|+|+|.+|..++..|+..|.-.++|+|-+. .|++.....+. .+....++....
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~-------------------~~l~~~~~~l~~~~~~~~~~~~i~~t~ 65 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK-------------------NMPHGKALDTSHTNVMAYSNCKVSGSN 65 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTHHHHHTCCCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHHHHhhhhhcCCCcEEEECC
Confidence 5899999999999999999999985599998532 13332222332 234455566543
Q ss_pred cCCChhhcCCCcEEEEec
Q 001074 255 SKLTKEQLSDFQAVVFTD 272 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~ 272 (1163)
+ . +.+.+.|+||.+.
T Consensus 66 d-~--~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 66 T-Y--DDLAGADVVIVTA 80 (322)
T ss_dssp C-G--GGGTTCSEEEECC
T ss_pred C-H--HHhCCCCEEEEeC
Confidence 2 2 4578999999986
No 203
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=88.60 E-value=0.81 Score=49.23 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=29.5
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA------RLLLFSRN 40 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 4567889998 68999999999999997 78887643
No 204
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=88.58 E-value=0.97 Score=48.83 Aligned_cols=36 Identities=31% Similarity=0.419 Sum_probs=30.7
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 44 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA------DLVLAART 44 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC------EEEEEeCC
Confidence 46788899998 68999999999999997 78888753
No 205
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=88.58 E-value=1.3 Score=48.42 Aligned_cols=79 Identities=14% Similarity=0.107 Sum_probs=47.7
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
+|.+++++|.| .||||.++++.|+..|. +++++|.+.-....+.+.-+.. -...+.+.+++.+....+
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~------~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-- 76 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA------DIIAVDICKPIRAGVVDTAIPA---STPEDLAETADLVKGHNR-- 76 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCSCSBTTBCCCSSCC---CCHHHHHHHHHHHHTTTC--
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC------eEEEEecccccccccccccccc---CCHHHHHHHHHHHhhcCC--
Confidence 46788999998 67999999999999998 8999886531111111111110 112344445555555443
Q ss_pred eEEEEeccCCc
Q 001074 651 NIEALQNRVGP 661 (1163)
Q Consensus 651 ~I~~~~~~v~~ 661 (1163)
++..+...+..
T Consensus 77 ~~~~~~~Dv~~ 87 (286)
T 3uve_A 77 RIVTAEVDVRD 87 (286)
T ss_dssp CEEEEECCTTC
T ss_pred ceEEEEcCCCC
Confidence 56666666654
No 206
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=88.56 E-value=0.27 Score=50.57 Aligned_cols=33 Identities=18% Similarity=0.380 Sum_probs=29.8
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
...|+|||+|..|+.+|..|++.|+ +++|+|..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~------~V~v~Ek~ 34 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH------QVHLFDKS 34 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC------CEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC------CEEEEECC
Confidence 3579999999999999999999999 89999853
No 207
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.53 E-value=0.69 Score=52.26 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=31.0
Q ss_pred hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
...||.|||+|.+|..++..|+..|. ..++++|.|
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~-----~~V~L~Di~ 47 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDL-----GDVYMFDII 47 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEECC
Confidence 44699999999999999999999998 569999865
No 208
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=88.51 E-value=0.76 Score=50.33 Aligned_cols=32 Identities=16% Similarity=0.532 Sum_probs=27.7
Q ss_pred CcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 576 AKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 576 ~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
++|+|.|+ |.||..+++.|+..|. +++++|.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY------EVVVVDNL 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC------EEEEEeCC
Confidence 47999997 9999999999999997 78888653
No 209
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=88.50 E-value=0.92 Score=50.84 Aligned_cols=95 Identities=12% Similarity=0.155 Sum_probs=58.7
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
+....+|.|||+|.+|+.++++|+..|. .++++|.+.- |++.+++ . .+.
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~------~V~~~dr~~~-------------------~~~~l~~----~--g~~ 76 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGY------ALQVWNRTPA-------------------RAASLAA----L--GAT 76 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTC------EEEEECSCHH-------------------HHHHHHT----T--TCE
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCC------eEEEEcCCHH-------------------HHHHHHH----C--CCE
Confidence 3455699999999999999999999997 7888875431 3222221 1 111
Q ss_pred EEEEeccCCcccccccchhhhccCCEEEEccCch-HHHHHHH--hh--cccccccEEecCCCC
Q 001074 652 IEALQNRVGPETENVFDDTFWENITCVINALDNV-NARLYVD--QR--CLYFQKPLLESGTLG 709 (1163)
Q Consensus 652 I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~-~aR~~v~--~~--c~~~~~PlI~sgt~G 709 (1163)
.. .+. .+..++.|+||.|+-+. ..+..+. .. ....+..+|+.++..
T Consensus 77 --~~-----~~~-----~e~~~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~ 127 (320)
T 4dll_A 77 --IH-----EQA-----RAAARDADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASIT 127 (320)
T ss_dssp --EE-----SSH-----HHHHTTCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCC
T ss_pred --ee-----CCH-----HHHHhcCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCC
Confidence 11 111 34567899999999754 4444443 22 233456677776643
No 210
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.46 E-value=2.6 Score=47.17 Aligned_cols=83 Identities=17% Similarity=0.071 Sum_probs=52.7
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCC-eEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVK-SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg-~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
..+|.|||+|.+|..+|+.|...|.. .|+++|.+.- +++ .+.++.-... ...+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~-------------------~~~----~a~~~G~~~~---~~~~ 86 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE-------------------SIS----KAVDLGIIDE---GTTS 86 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH-------------------HHH----HHHHTTSCSE---EESC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH-------------------HHH----HHHHCCCcch---hcCC
Confidence 36899999999999999999999974 7888885321 121 1222221001 1122
Q ss_pred CChh-hcCCCcEEEEecCChhHHHHHHHHHHh
Q 001074 257 LTKE-QLSDFQAVVFTDISLDKAIEFDDFCHN 287 (1163)
Q Consensus 257 l~~e-~l~~fdvVI~~~~~~~~~~~ln~~cr~ 287 (1163)
+ ++ .+.+.|+||+|.........+.++...
T Consensus 87 ~-~~~~~~~aDvVilavp~~~~~~vl~~l~~~ 117 (314)
T 3ggo_A 87 I-AKVEDFSPDFVMLSSPVRTFREIAKKLSYI 117 (314)
T ss_dssp T-TGGGGGCCSEEEECSCGGGHHHHHHHHHHH
T ss_pred H-HHHhhccCCEEEEeCCHHHHHHHHHHHhhc
Confidence 2 34 578899999998655444445555443
No 211
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=88.44 E-value=0.88 Score=49.70 Aligned_cols=63 Identities=14% Similarity=0.241 Sum_probs=41.5
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
-+++++++|.| .||||.++++.|+..|. +++++|.+ ..+.+.+++.+.....
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~-- 73 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGI------AVYGCARD-------------------AKNVSAAVDGLRAAGH-- 73 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHTTTC--
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHhcCC--
Confidence 35677889998 68999999999999998 78887753 2345555566655443
Q ss_pred eEEEEeccCCc
Q 001074 651 NIEALQNRVGP 661 (1163)
Q Consensus 651 ~I~~~~~~v~~ 661 (1163)
++..+...+..
T Consensus 74 ~~~~~~~Dv~d 84 (279)
T 3sju_A 74 DVDGSSCDVTS 84 (279)
T ss_dssp CEEEEECCTTC
T ss_pred cEEEEECCCCC
Confidence 45555555553
No 212
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=88.40 E-value=1.8 Score=51.20 Aligned_cols=91 Identities=11% Similarity=0.184 Sum_probs=57.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHh-CC--CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 178 ASNILVSGMQGLGAEIAKNLILA-GV--KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvla-GV--g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
+.+|+|+|+||+|+.+|..|+.. ++ ..|+++|.+.. ++.. .+.+ .+++....
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~----------------~~~~----~~~~-----g~~~~~~~ 67 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT----------------KVDV----AQQY-----GVSFKLQQ 67 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC----------------SCCH----HHHH-----TCEEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh----------------hhhH----Hhhc-----CCceeEEe
Confidence 57899999999999999999986 45 48999986443 1101 1111 23333222
Q ss_pred cC---C---ChhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEE
Q 001074 255 SK---L---TKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 296 (1163)
Q Consensus 255 ~~---l---~~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~ 296 (1163)
-+ + -...+.+.|+||.+... ..-..+-+.|.+.| +-+|.
T Consensus 68 Vdadnv~~~l~aLl~~~DvVIN~s~~-~~~l~Im~acleaG--v~YlD 112 (480)
T 2ph5_A 68 ITPQNYLEVIGSTLEENDFLIDVSIG-ISSLALIILCNQKG--ALYIN 112 (480)
T ss_dssp CCTTTHHHHTGGGCCTTCEEEECCSS-SCHHHHHHHHHHHT--CEEEE
T ss_pred ccchhHHHHHHHHhcCCCEEEECCcc-ccCHHHHHHHHHcC--CCEEE
Confidence 11 1 11245556999975544 34567888999999 76664
No 213
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=88.37 E-value=2.3 Score=47.88 Aligned_cols=74 Identities=11% Similarity=0.197 Sum_probs=50.6
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHh-CCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEe
Q 001074 176 LFASNILVSG-MQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 253 (1163)
Q Consensus 176 L~~s~VlIiG-~gglGsEiaKNLvla-GVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~ 253 (1163)
+++++|+|.| .|++|.++++.|+.. |..+|++++.+. .+...+.+.+ . ...+...
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~-------------------~~~~~~~~~~---~-~~~v~~~ 75 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDE-------------------LKQSEMAMEF---N-DPRMRFF 75 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCH-------------------HHHHHHHHHH---C-CTTEEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECCh-------------------hhHHHHHHHh---c-CCCEEEE
Confidence 3467899999 599999999999999 988899987532 1223332222 1 2345566
Q ss_pred ecCCCh-----hhcCCCcEEEEec
Q 001074 254 TSKLTK-----EQLSDFQAVVFTD 272 (1163)
Q Consensus 254 ~~~l~~-----e~l~~fdvVI~~~ 272 (1163)
..++.+ +.+.+.|+||.+.
T Consensus 76 ~~Dl~d~~~l~~~~~~~D~Vih~A 99 (344)
T 2gn4_A 76 IGDVRDLERLNYALEGVDICIHAA 99 (344)
T ss_dssp ECCTTCHHHHHHHTTTCSEEEECC
T ss_pred ECCCCCHHHHHHHHhcCCEEEECC
Confidence 666643 3467889999765
No 214
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=88.34 E-value=0.44 Score=54.47 Aligned_cols=142 Identities=14% Similarity=0.082 Sum_probs=77.5
Q ss_pred ccCchhhHhhhhhhHHHHHhhcCCc------ccce--eeeeeeccCCCCCCCCCCCCCCCccCchhhhhhhcCHHHHHHH
Q 001074 502 VLNPMAAMFGGIVGQEVVKACSGKF------HPLY--QFFYFDSVESLPTEPLDSTEFKPINSRYDAQISVFGAKLQKKL 573 (1163)
Q Consensus 502 el~PvaA~iGGiaAQEVIKaiTgkf------~PI~--q~~~fD~ie~Lp~~~~~~~~~~~~~~Rydrq~~l~G~~~q~kL 573 (1163)
.+.-|-|..|+.+ .+|.++.-. .|-. -.++||.-++.|..-++...+ ..-|-+.. ...+.....+.
T Consensus 54 ~~~~mpa~~~~~~---g~K~v~~~p~N~~~glp~~~~~~~L~d~~tG~p~a~~d~~~l--T~~RTaa~-s~laa~~la~~ 127 (350)
T 1x7d_A 54 VIELMPVADKSRY---AFKYVNGHPANTARNLHTVMAFGVLADVDSGYPVLLSELTIA--TALRTAAT-SLMAAQALARP 127 (350)
T ss_dssp EEEEEEEECSSEE---EEEEEEECGGGGGGTCCSEEEEEEEEETTTCCEEEEEECHHH--HHHHHHHH-HHHHHHHHSCT
T ss_pred EEEEEeccCCCcE---EEEEEEecCCcccCCCccEEEEEEEEECCCCCEEEEEcCCEE--EeehhhHH-HHHHHHHhccc
Confidence 3444555556543 357665522 2322 255677766666422211100 01122211 11222222234
Q ss_pred hcCcEEEEecCcchHHHHHHHHH-cccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeE
Q 001074 574 EDAKVFIVGSGALGCEFLKNVAL-MGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~-~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I 652 (1163)
..+++.|||+|+.|..+++.|.. .++ .+++|+|.+ ..|++.+++.+... +.+.+
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~-----~~V~V~~r~-------------------~~~a~~la~~~~~~-~g~~~ 182 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGI-----EEIVAYDTD-------------------PLATAKLIANLKEY-SGLTI 182 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCC-----CEEEEECSS-------------------HHHHHHHHHHHTTC-TTCEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCC-----cEEEEEcCC-------------------HHHHHHHHHHHHhc-cCceE
Confidence 56799999999999999999864 466 688887543 33666666665432 34444
Q ss_pred EEEeccCCcccccccchhhhccCCEEEEccCc
Q 001074 653 EALQNRVGPETENVFDDTFWENITCVINALDN 684 (1163)
Q Consensus 653 ~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn 684 (1163)
.... +. .+.+.+.|+|++|+-+
T Consensus 183 ~~~~-----~~-----~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 183 RRAS-----SV-----AEAVKGVDIITTVTAD 204 (350)
T ss_dssp EECS-----SH-----HHHHTTCSEEEECCCC
T ss_pred EEeC-----CH-----HHHHhcCCEEEEeccC
Confidence 3321 11 2456789999999864
No 215
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.33 E-value=0.93 Score=51.92 Aligned_cols=36 Identities=17% Similarity=0.421 Sum_probs=30.5
Q ss_pred HhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 573 L~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
++..+|.|||+|.+|..++++|+..|. .++++|.+.
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~------~V~v~dr~~ 55 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGH------ECVVYDLNV 55 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSCH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCC------EEEEEeCCH
Confidence 456899999999999999999999997 788887653
No 216
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=88.32 E-value=0.66 Score=50.18 Aligned_cols=64 Identities=14% Similarity=0.248 Sum_probs=44.4
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
.+++++++|.| .||||.++++.|+..|. +++++|.+. .+.+.+++.+.+.. ..
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~-~~ 60 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGA------NVAVAGRST-------------------ADIDACVADLDQLG-SG 60 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHTTS-SS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhhC-CC
Confidence 46678888887 78999999999999997 788887542 24444555555443 23
Q ss_pred eEEEEeccCCc
Q 001074 651 NIEALQNRVGP 661 (1163)
Q Consensus 651 ~I~~~~~~v~~ 661 (1163)
++..+...+..
T Consensus 61 ~~~~~~~Dv~~ 71 (262)
T 3pk0_A 61 KVIGVQTDVSD 71 (262)
T ss_dssp CEEEEECCTTS
T ss_pred cEEEEEcCCCC
Confidence 56666666653
No 217
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=88.27 E-value=0.98 Score=50.06 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=27.0
Q ss_pred CcEEEEec-CcchHHHHHHHHHc-ccccCCCccEEEecCC
Q 001074 576 AKVFIVGS-GALGCEFLKNVALM-GVSCGNQGKLTITDDD 613 (1163)
Q Consensus 576 ~kVlvVGa-GglGce~lknLa~~-Gv~~~~~g~i~ivD~D 613 (1163)
++|+|.|+ |.||..+++.|+.. |. +++++|.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~------~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY------EVYGLDIG 34 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC------EEEEEESC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC------EEEEEeCC
Confidence 37999996 99999999999998 65 78888754
No 218
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=88.22 E-value=1.3 Score=47.95 Aligned_cols=35 Identities=31% Similarity=0.328 Sum_probs=31.5
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
.+++ +|+|+|+|++|..+++.|...|+ +++++|.+
T Consensus 114 ~l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r~ 148 (263)
T 2d5c_A 114 PLKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNRT 148 (263)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 3667 99999999999999999999998 89999854
No 219
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=88.22 E-value=1.3 Score=49.62 Aligned_cols=102 Identities=11% Similarity=0.088 Sum_probs=62.2
Q ss_pred HhcCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 573 L~~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
+..++|+|.|+ |.||..+++.|+..|. ++++++.+.- -...|...+. .+.. + .
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~------~V~~l~R~~~---------------~~~~~~~~~~-~l~~--~--~ 61 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHR------PTYILARPGP---------------RSPSKAKIFK-ALED--K--G 61 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTC------CEEEEECSSC---------------CCHHHHHHHH-HHHH--T--T
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCC------CEEEEECCCC---------------CChhHHHHHH-HHHh--C--C
Confidence 34579999998 9999999999999986 6777764420 0112333221 1221 2 3
Q ss_pred EEEEeccCCcccccccchhhhc--cCCEEEEccC--chHHHHHHHhhccccc-ccEE
Q 001074 652 IEALQNRVGPETENVFDDTFWE--NITCVINALD--NVNARLYVDQRCLYFQ-KPLL 703 (1163)
Q Consensus 652 I~~~~~~v~~~~e~~~~~~f~~--~~DvVi~alD--n~~aR~~v~~~c~~~~-~PlI 703 (1163)
++.+...+.+. +.+ ...++ ++|+||++.. |+..-..+-+.|...+ ++.+
T Consensus 62 v~~~~~Dl~d~-~~l--~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 62 AIIVYGLINEQ-EAM--EKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp CEEEECCTTCH-HHH--HHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred cEEEEeecCCH-HHH--HHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 44555555531 222 34567 9999999886 5666666777777666 5433
No 220
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=88.21 E-value=0.51 Score=51.03 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=29.0
Q ss_pred cCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 575 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 575 ~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
.++|+|.| +|+||.++++.|+..|. +++++|.+.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~------~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE------ILRLADLSP 37 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE------EEEEEESSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC------EEEEEecCC
Confidence 46799998 69999999999999997 788887654
No 221
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.21 E-value=0.94 Score=50.22 Aligned_cols=32 Identities=34% Similarity=0.567 Sum_probs=29.1
Q ss_pred CcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 576 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 576 ~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+|.||| +|.+|..+++.|+..|. .++++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC------eEEEEECC
Confidence 5899999 99999999999999997 78888865
No 222
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.20 E-value=0.86 Score=50.44 Aligned_cols=35 Identities=20% Similarity=0.420 Sum_probs=30.2
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++|+|.| .||||.++++.|+..|. +++++|.+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~------~V~~~~r~ 64 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA------RLVLSDVD 64 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 6778999998 58999999999999998 78887653
No 223
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=88.19 E-value=0.73 Score=52.14 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=49.9
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC--eE
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL--NI 652 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~--~I 652 (1163)
..||.|||+|.+|+.++..|+..|+. +.|+++|.+ ..|++..+.-+....|.. .+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~----~~l~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~v 61 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGIT----DELVVIDVN-------------------KEKAMGDVMDLNHGKAFAPQPV 61 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSC-------------------HHHHHHHHHHHHHTGGGSSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC----ceEEEEecc-------------------hHHHHHHHHHHHhccccccCCe
Confidence 46899999999999999999999983 589998753 335555555555444322 12
Q ss_pred EEEeccCCcccccccchhhhccCCEEEEcc
Q 001074 653 EALQNRVGPETENVFDDTFWENITCVINAL 682 (1163)
Q Consensus 653 ~~~~~~v~~~~e~~~~~~f~~~~DvVi~al 682 (1163)
...... .+-+++.|+||.+.
T Consensus 62 ~i~~~~----------~~a~~~aDvVvi~a 81 (326)
T 3pqe_A 62 KTSYGT----------YEDCKDADIVCICA 81 (326)
T ss_dssp EEEEEC----------GGGGTTCSEEEECC
T ss_pred EEEeCc----------HHHhCCCCEEEEec
Confidence 222111 12357899998874
No 224
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=88.14 E-value=1.1 Score=47.91 Aligned_cols=84 Identities=20% Similarity=0.279 Sum_probs=52.3
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
+++++|+|.| .||||.++++.|+..|. ..++++|.+.- + + ..+.+.+..+..+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~-----~~v~~~~r~~~-------------------~-~-~~~~l~~~~~~~~ 56 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNL-----KNFVILDRVEN-------------------P-T-ALAELKAINPKVN 56 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCC-----SEEEEEESSCC-------------------H-H-HHHHHHHHCTTSE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-----cEEEEEecCch-------------------H-H-HHHHHHHhCCCce
Confidence 4678899998 78999999999999997 44888764320 0 1 1233444455567
Q ss_pred EEEEeccCCcc-c--ccccc--hhhhccCCEEEEcc
Q 001074 652 IEALQNRVGPE-T--ENVFD--DTFWENITCVINAL 682 (1163)
Q Consensus 652 I~~~~~~v~~~-~--e~~~~--~~f~~~~DvVi~al 682 (1163)
+..+...+... . +..+. .+-+.++|+||++.
T Consensus 57 ~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~A 92 (254)
T 1sby_A 57 ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGA 92 (254)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECC
Confidence 77777776643 1 11111 01134788888774
No 225
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=88.12 E-value=0.73 Score=50.46 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=27.4
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEec
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITD 611 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD 611 (1163)
.+|.|||+|.+|+.+++.|+..|. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC------EEEEEc
Confidence 489999999999999999999987 788887
No 226
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.97 E-value=0.84 Score=49.58 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=30.1
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+++ +|+|||+|++|..+++.|+..|+ +++++|.+
T Consensus 114 ~l~~-~v~iiG~G~~g~~~a~~l~~~g~------~v~v~~r~ 148 (263)
T 2d5c_A 114 PLKG-PALVLGAGGAGRAVAFALREAGL------EVWVWNRT 148 (263)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHTTC------CEEEECSS
T ss_pred CCCC-eEEEECCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 3667 99999999999999999999987 68887643
No 227
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=87.97 E-value=0.57 Score=51.42 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=30.5
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~------~V~~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGA------KVVVTARN 41 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEECCSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 46778888888 58999999999999998 78888754
No 228
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.88 E-value=2 Score=46.60 Aligned_cols=30 Identities=27% Similarity=0.249 Sum_probs=27.5
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
+|.|||+|.+|..+++.|...|. +++++|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 31 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSR 31 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 79999999999999999999997 7888875
No 229
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=87.84 E-value=0.69 Score=51.45 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=28.6
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+|.|||+|.+|+.+++.|+..|. +++++|.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC------EEEEEeCC
Confidence 589999999999999999999997 68888754
No 230
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=87.84 E-value=0.76 Score=49.24 Aligned_cols=36 Identities=17% Similarity=0.380 Sum_probs=30.9
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+|++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~------~V~~~~r~ 39 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGA------TVIVSDIN 39 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 57788999998 58999999999999997 78887653
No 231
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=87.83 E-value=0.67 Score=50.76 Aligned_cols=85 Identities=13% Similarity=0.236 Sum_probs=52.4
Q ss_pred HHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCC
Q 001074 571 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR 649 (1163)
Q Consensus 571 ~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~ 649 (1163)
..+.+++++|.| .||||.++++.|+..|. +++++|... ..+.+.+++.+....+
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~~~~------------------~~~~~~~~~~~~~~~~- 79 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALAASGF------DIAITGIGD------------------AEGVAPVIAELSGLGA- 79 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCC------------------HHHHHHHHHHHHHTTC-
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHHHCCC------eEEEEeCCC------------------HHHHHHHHHHHHhcCC-
Confidence 346678889998 68999999999999997 788887321 1244445555555443
Q ss_pred CeEEEEeccCCcccc--cccc--hhhhccCCEEEEc
Q 001074 650 LNIEALQNRVGPETE--NVFD--DTFWENITCVINA 681 (1163)
Q Consensus 650 ~~I~~~~~~v~~~~e--~~~~--~~f~~~~DvVi~a 681 (1163)
++..+...+..... ..++ .+-+..+|++|++
T Consensus 80 -~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn 114 (280)
T 4da9_A 80 -RVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNN 114 (280)
T ss_dssp -CEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEE
T ss_pred -cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 45666666654221 1110 0112367777766
No 232
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.82 E-value=0.69 Score=54.78 Aligned_cols=107 Identities=7% Similarity=0.140 Sum_probs=75.2
Q ss_pred hhhhhcCHHHHHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHH
Q 001074 560 AQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVA 639 (1163)
Q Consensus 560 rq~~l~G~~~q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~va 639 (1163)
+....||... -..++|+|+|.|-+|..+++.|-. + .+++|++.|. .|++.+
T Consensus 223 ~~~~~~g~~~---~~~~~v~I~GgG~ig~~lA~~L~~-~------~~v~iIE~d~-------------------~r~~~l 273 (461)
T 4g65_A 223 SVMSELQRLE---KPYRRIMIVGGGNIGASLAKRLEQ-T------YSVKLIERNL-------------------QRAEKL 273 (461)
T ss_dssp HHHHHTTGGG---SCCCEEEEECCSHHHHHHHHHHTT-T------SEEEEEESCH-------------------HHHHHH
T ss_pred HHHHhhcccc---ccccEEEEEcchHHHHHHHHHhhh-c------CceEEEecCH-------------------HHHHHH
Confidence 3444566542 235789999999999999999843 3 4788886553 366666
Q ss_pred HHHHHhhCCCCeEEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEE
Q 001074 640 ASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLL 703 (1163)
Q Consensus 640 a~~l~~~np~~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI 703 (1163)
++.+ |++ ..++...++ ..++.++-.+++|++|.++++.+.-..+.-.+.+++.+-+
T Consensus 274 a~~l----~~~--~Vi~GD~td--~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kv 329 (461)
T 4g65_A 274 SEEL----ENT--IVFCGDAAD--QELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKV 329 (461)
T ss_dssp HHHC----TTS--EEEESCTTC--HHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHC----CCc--eEEeccccc--hhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccc
Confidence 6554 443 344444442 3345566678999999999999999999999988877644
No 233
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=87.81 E-value=0.84 Score=50.81 Aligned_cols=94 Identities=13% Similarity=0.118 Sum_probs=59.1
Q ss_pred hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEE
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~ 653 (1163)
...+|.|||+|.+|..++++|+..|. +++++|.+. .|++.+++. .+.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~------~V~~~dr~~-------------------~~~~~~~~~------g~~-- 54 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGK------RVAIWNRSP-------------------GKAAALVAA------GAH-- 54 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTC------CEEEECSSH-------------------HHHHHHHHH------TCE--
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHC------CCe--
Confidence 35689999999999999999999997 788876542 233333221 111
Q ss_pred EEeccCCcccccccchhhhccCCEEEEccCchH-HHHHHH--hh-cccccccEEecCCCCc
Q 001074 654 ALQNRVGPETENVFDDTFWENITCVINALDNVN-ARLYVD--QR-CLYFQKPLLESGTLGA 710 (1163)
Q Consensus 654 ~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~-aR~~v~--~~-c~~~~~PlI~sgt~G~ 710 (1163)
. ..+. .+..++.|+||.|+-+.. .+..+. .. ....+..+|+.++...
T Consensus 55 ~-----~~~~-----~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~ 105 (306)
T 3l6d_A 55 L-----CESV-----KAALSASPATIFVLLDNHATHEVLGMPGVARALAHRTIVDYTTNAQ 105 (306)
T ss_dssp E-----CSSH-----HHHHHHSSEEEECCSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCT
T ss_pred e-----cCCH-----HHHHhcCCEEEEEeCCHHHHHHHhcccchhhccCCCEEEECCCCCH
Confidence 0 1111 345678999999997654 555443 11 1234566777766543
No 234
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=87.81 E-value=1.1 Score=49.71 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=32.4
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|.+++|.|||+|.+|..+++.|...|+ +++.+|..
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~------~V~~~dr~ 154 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAFGM------RVIAYTRS 154 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTC------EEEEECSS
T ss_pred eeecchheeeccCchhHHHHHHHHhhCc------EEEEEecc
Confidence 4678899999999999999999999998 88888864
No 235
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=87.80 E-value=1.3 Score=48.54 Aligned_cols=37 Identities=27% Similarity=0.439 Sum_probs=29.5
Q ss_pred HhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 175 RLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 175 kL~~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
.+...+|||.|+ |.+|+.+++.|...|. +|++++...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCC
Confidence 456789999997 8899999999999996 677877644
No 236
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=87.79 E-value=0.86 Score=48.64 Aligned_cols=78 Identities=18% Similarity=0.239 Sum_probs=53.6
Q ss_pred cEEEEecCcchHHHHHHHHHcccccCCCccE-EEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001074 577 KVFIVGSGALGCEFLKNVALMGVSCGNQGKL-TITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (1163)
Q Consensus 577 kVlvVGaGglGce~lknLa~~Gv~~~~~g~i-~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~~ 655 (1163)
||.|||+|.+|..++++|...|+ .+ .+.|.+. ...+ .+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~------~lv~v~d~~~----~~~~-------------------------------~~ 40 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGF------EIAAILDVRG----EHEK-------------------------------MV 40 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC------EEEEEECSSC----CCTT-------------------------------EE
T ss_pred EEEEECCCHHHHHHHHHHhcCCC------EEEEEEecCc----chhh-------------------------------hc
Confidence 79999999999999999998787 55 6887652 1111 11
Q ss_pred eccCCcccccccchhhh-ccCCEEEEccCchHHHHHHHhhcccccccEEecC
Q 001074 656 QNRVGPETENVFDDTFW-ENITCVINALDNVNARLYVDQRCLYFQKPLLESG 706 (1163)
Q Consensus 656 ~~~v~~~~e~~~~~~f~-~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sg 706 (1163)
.+. .++. .+.|+|+.|+-+.....++ ..|...|+++|...
T Consensus 41 -----~~~-----~~l~~~~~DvVv~~~~~~~~~~~~-~~~l~~G~~vv~~~ 81 (236)
T 2dc1_A 41 -----RGI-----DEFLQREMDVAVEAASQQAVKDYA-EKILKAGIDLIVLS 81 (236)
T ss_dssp -----SSH-----HHHTTSCCSEEEECSCHHHHHHHH-HHHHHTTCEEEESC
T ss_pred -----CCH-----HHHhcCCCCEEEECCCHHHHHHHH-HHHHHCCCcEEEEC
Confidence 111 2334 5899999999877555555 46677788777543
No 237
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=87.78 E-value=1.7 Score=48.88 Aligned_cols=33 Identities=30% Similarity=0.297 Sum_probs=29.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
..+|+|+|+|.+|+.+|..|...|. .++++|.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 3689999999999999999999996 68888753
No 238
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=87.78 E-value=0.92 Score=50.32 Aligned_cols=32 Identities=22% Similarity=0.399 Sum_probs=27.8
Q ss_pred CcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 576 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 576 ~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+|+|.| .|.||..+++.|+..|. +++++|.+
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 46 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGH------DLVLIHRP 46 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC------EEEEEecC
Confidence 4799999 59999999999999986 78888764
No 239
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=87.78 E-value=0.85 Score=49.66 Aligned_cols=62 Identities=19% Similarity=0.250 Sum_probs=42.3
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
+.+++++|.| .||||.++++.|+..|. +++++|.+. .+.+.+++.+.... .+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~--~~ 54 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGA------KILLGARRQ-------------------ARIEAIATEIRDAG--GT 54 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESSH-------------------HHHHHHHHHHHHTT--CE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC------EEEEEECCH-------------------HHHHHHHHHHHhcC--Cc
Confidence 3567788888 58999999999999998 788887432 34455555555543 34
Q ss_pred EEEEeccCCc
Q 001074 652 IEALQNRVGP 661 (1163)
Q Consensus 652 I~~~~~~v~~ 661 (1163)
+..+...++.
T Consensus 55 ~~~~~~Dv~d 64 (264)
T 3tfo_A 55 ALAQVLDVTD 64 (264)
T ss_dssp EEEEECCTTC
T ss_pred EEEEEcCCCC
Confidence 5555555553
No 240
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.75 E-value=1.8 Score=47.37 Aligned_cols=31 Identities=29% Similarity=0.446 Sum_probs=28.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
.+|+|+|+|.+|+.+|..|..+|. .++++|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEEC
Confidence 489999999999999999999996 7888875
No 241
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=87.74 E-value=1.4 Score=48.00 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=48.0
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
.+++++++|.| .||||.++++.|+..|. +++++|.+.-....+.. . .-...+.+.+++.+.... .
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~------~V~~~~r~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~--~ 77 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA------DIIACDICAPVSASVTY----A--PASPEDLDETARLVEDQG--R 77 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCSCCCTTCCS----C--CCCHHHHHHHHHHHHTTT--C
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeccccccccccc----c--ccCHHHHHHHHHHHHhcC--C
Confidence 57788999998 68999999999999998 88998864321111111 0 012334555555565543 3
Q ss_pred eEEEEeccCCc
Q 001074 651 NIEALQNRVGP 661 (1163)
Q Consensus 651 ~I~~~~~~v~~ 661 (1163)
++..+...+..
T Consensus 78 ~~~~~~~Dv~~ 88 (280)
T 3pgx_A 78 KALTRVLDVRD 88 (280)
T ss_dssp CEEEEECCTTC
T ss_pred eEEEEEcCCCC
Confidence 45556555553
No 242
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=87.73 E-value=1.6 Score=49.15 Aligned_cols=72 Identities=17% Similarity=0.166 Sum_probs=50.6
Q ss_pred eEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHh----cCCCEEEEee
Q 001074 180 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL----NNAVVLSTLT 254 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eL----Np~V~V~~~~ 254 (1163)
+|.|+|+|.+|+.+|..|+..|+ ..++|+|.+. .|++..+.-|+.. ...+++....
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~-------------------~k~~g~a~DL~~~~~~~~~~~~v~~~~ 62 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD-------------------GMPQGKALDMRESSPIHGFDTRVTGTN 62 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch-------------------HHHHHHHHHHhccccccCCCcEEEECC
Confidence 79999999999999999999997 5899998532 2344333344432 2345565331
Q ss_pred cCCChhhcCCCcEEEEecC
Q 001074 255 SKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~ 273 (1163)
+.+.+.+.|+||.+..
T Consensus 63 ---~~~a~~~aDvVii~ag 78 (314)
T 3nep_X 63 ---DYGPTEDSDVCIITAG 78 (314)
T ss_dssp ---SSGGGTTCSEEEECCC
T ss_pred ---CHHHhCCCCEEEECCC
Confidence 2457889999999865
No 243
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=87.72 E-value=0.82 Score=50.36 Aligned_cols=33 Identities=12% Similarity=0.312 Sum_probs=29.4
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+++++|+|+||.|..++..|+..|. +|+|++.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~------~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL------QVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 8899999999999999999999994 88887543
No 244
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=87.66 E-value=0.68 Score=50.21 Aligned_cols=36 Identities=22% Similarity=0.584 Sum_probs=30.6
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 53 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGA------RLVLSGRD 53 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 46778888888 68999999999999997 78888753
No 245
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=87.58 E-value=0.61 Score=52.11 Aligned_cols=74 Identities=18% Similarity=0.196 Sum_probs=49.0
Q ss_pred HHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCC
Q 001074 571 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR 649 (1163)
Q Consensus 571 ~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~ 649 (1163)
..+.+++++|.| .||||.++++.|+..|. +++++|.+.- +.|. ..-...+.+.+++.+....+
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~------~Vv~~~r~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~- 86 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGA------RVVVNDIGVG----LDGS-----PASGGSAAQSVVDEITAAGG- 86 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEECCCBC----TTSS-----BTCTTSHHHHHHHHHHHTTC-
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCccc----cccc-----ccccHHHHHHHHHHHHhcCC-
Confidence 457788888888 68999999999999997 8999886632 1111 11123455556666665443
Q ss_pred CeEEEEeccCCc
Q 001074 650 LNIEALQNRVGP 661 (1163)
Q Consensus 650 ~~I~~~~~~v~~ 661 (1163)
++..+...+..
T Consensus 87 -~~~~~~~Dv~d 97 (322)
T 3qlj_A 87 -EAVADGSNVAD 97 (322)
T ss_dssp -EEEEECCCTTS
T ss_pred -cEEEEECCCCC
Confidence 56666655553
No 246
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=87.57 E-value=1.5 Score=49.05 Aligned_cols=72 Identities=24% Similarity=0.258 Sum_probs=52.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhc---CCCEEEEee
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTLT 254 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLN---p~V~V~~~~ 254 (1163)
.||.|+|+|++|..++-.|+..|. ++|.|+|-+ ..|++..+..|.... ..+++..
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~k~~g~a~dl~~~~~~~~~~~v~~-- 59 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD-------------------RKLAQAHAEDILHATPFAHPVWVWA-- 59 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS-------------------HHHHHHHHHHHHTTGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------hhHHHHHHHHHHHhHhhcCCeEEEE--
Confidence 379999999999999999998874 579998842 235655555555533 3556664
Q ss_pred cCCChhhcCCCcEEEEecC
Q 001074 255 SKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~ 273 (1163)
. +.+.+.+.|+||.+..
T Consensus 60 ~--~~~a~~~aD~Vii~ag 76 (310)
T 2xxj_A 60 G--SYGDLEGARAVVLAAG 76 (310)
T ss_dssp C--CGGGGTTEEEEEECCC
T ss_pred C--CHHHhCCCCEEEECCC
Confidence 2 3566899999999864
No 247
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=87.57 E-value=0.91 Score=48.87 Aligned_cols=36 Identities=28% Similarity=0.478 Sum_probs=31.0
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
++++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 41 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGA------TVAIADID 41 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 46778899998 68999999999999997 78888754
No 248
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=87.52 E-value=2.7 Score=47.17 Aligned_cols=112 Identities=13% Similarity=0.197 Sum_probs=63.3
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHH--hCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEE
Q 001074 176 LFASNILVSG-MQGLGAEIAKNLIL--AGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLST 252 (1163)
Q Consensus 176 L~~s~VlIiG-~gglGsEiaKNLvl--aGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~ 252 (1163)
|...+|||.| .|++|..+++.|+. .|. +|+++|...-...-..+ ..+.+++. ..+ +...+..
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~----~~~~~~~~---------~~~-~~~~~~~ 72 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTLFSNN----RPSSLGHF---------KNL-IGFKGEV 72 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-----------CCCCCCG---------GGG-TTCCSEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCcccccccc----chhhhhhh---------hhc-cccCceE
Confidence 4578999996 59999999999999 776 67777753220000000 00001110 011 1112334
Q ss_pred eecCCCh-----hh-cCCCcEEEEecC-------Ch--------hHHHHHHHHHHhcCCCceeEEeeecceeE
Q 001074 253 LTSKLTK-----EQ-LSDFQAVVFTDI-------SL--------DKAIEFDDFCHNHQPAISFIKAEVRGLFG 304 (1163)
Q Consensus 253 ~~~~l~~-----e~-l~~fdvVI~~~~-------~~--------~~~~~ln~~cr~~~~~IpfI~~~~~G~~G 304 (1163)
...++++ +. ..++|+||-+.. .. .....+-+.|++.+ ++||.+++.+.+|
T Consensus 73 ~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~~~V~~SS~~vyg 143 (362)
T 3sxp_A 73 IAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK--AKVIYASSAGVYG 143 (362)
T ss_dssp EECCTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT--CEEEEEEEGGGGC
T ss_pred EECCCCCHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC--CcEEEeCcHHHhC
Confidence 4444432 12 457788886532 11 22245667888888 7799988877765
No 249
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=87.44 E-value=1.1 Score=50.22 Aligned_cols=88 Identities=15% Similarity=0.135 Sum_probs=61.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l 257 (1163)
+.+|+|+|+|.+|..+++.|...|. ++++|.+.- +++ +++ ..+ .+...+.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~~-------------------~~~-----~~~--~~~--~~i~gd~ 164 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDENV-------------------RKK-----VLR--SGA--NFVHGDP 164 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGGG-------------------HHH-----HHH--TTC--EEEESCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCChh-------------------hhh-----HHh--CCc--EEEEeCC
Confidence 5689999999999999999999997 888886431 222 222 233 3344443
Q ss_pred C-hh-----hcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeE
Q 001074 258 T-KE-----QLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFI 295 (1163)
Q Consensus 258 ~-~e-----~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI 295 (1163)
+ ++ .+.++|.||++..+.+....+-..+++.+++++.|
T Consensus 165 ~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 165 TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESVRII 208 (336)
T ss_dssp TSHHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTTCTTSEEE
T ss_pred CCHHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHHCCCCeEE
Confidence 2 22 36688999998887777778888899988544444
No 250
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=87.39 E-value=1.7 Score=49.08 Aligned_cols=73 Identities=16% Similarity=0.246 Sum_probs=52.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhc---CCCEEEEe
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTL 253 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLN---p~V~V~~~ 253 (1163)
..||.|+|+|++|..++-.|+..|. .+|.|+|-+ ..|++..+..|.... ..+++..
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~i~~- 68 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF-------------------KDKTKGDAIDLSNALPFTSPKKIYS- 68 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCCEEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC-------------------chHhHHHHHHHHHHHHhcCCeEEEE-
Confidence 4689999999999999999998884 578888841 235555555555433 4455554
Q ss_pred ecCCChhhcCCCcEEEEecC
Q 001074 254 TSKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 254 ~~~l~~e~l~~fdvVI~~~~ 273 (1163)
+ +.+.+.+.|+||.+..
T Consensus 69 -~--~~~a~~~aDvVii~ag 85 (326)
T 2zqz_A 69 -A--EYSDAKDADLVVITAG 85 (326)
T ss_dssp -C--CGGGGGGCSEEEECCC
T ss_pred -C--CHHHhCCCCEEEEcCC
Confidence 2 3456889999999865
No 251
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=87.34 E-value=1.4 Score=51.86 Aligned_cols=94 Identities=19% Similarity=0.169 Sum_probs=61.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~ 255 (1163)
+++++|+|+|+|+.|..+|+.|...|. ++++.|..... . ....+.|++. .+++. .+
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~~~----------------~---~~~~~~L~~~--gi~~~--~g 62 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKPFD----------------E---NPTAQSLLEE--GIKVV--CG 62 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSCGG----------------G---CHHHHHHHHT--TCEEE--ES
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCccc----------------C---ChHHHHHHhC--CCEEE--EC
Confidence 567899999999999999999999996 89999974420 0 0123456555 34444 23
Q ss_pred CCChhhcCC-CcEEEEecCChhHHHHHHHHHHhcCCCceeEE
Q 001074 256 KLTKEQLSD-FQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 296 (1163)
Q Consensus 256 ~l~~e~l~~-fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~ 296 (1163)
.-.++.+.+ +|+||.+..-....-. -..+++.+ +|++.
T Consensus 63 ~~~~~~~~~~~d~vv~spgi~~~~p~-~~~a~~~g--i~v~~ 101 (451)
T 3lk7_A 63 SHPLELLDEDFCYMIKNPGIPYNNPM-VKKALEKQ--IPVLT 101 (451)
T ss_dssp CCCGGGGGSCEEEEEECTTSCTTSHH-HHHHHHTT--CCEEC
T ss_pred CChHHhhcCCCCEEEECCcCCCCChh-HHHHHHCC--CcEEe
Confidence 333445566 9999987642121112 33567888 88763
No 252
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.32 E-value=0.93 Score=48.74 Aligned_cols=34 Identities=12% Similarity=0.240 Sum_probs=30.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC---CeEEEEeCC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGV---KSVTLHDEG 211 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGV---g~itLvD~d 211 (1163)
..+|.|||+|.+|+.++++|..+|. ..++++|.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCC
Confidence 3589999999999999999999995 579999864
No 253
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=87.31 E-value=5.7 Score=45.70 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=57.3
Q ss_pred HHhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcC--CCEE
Q 001074 174 RRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN--AVVL 250 (1163)
Q Consensus 174 ~kL~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp--~V~V 250 (1163)
..+++.+|||.| .|++|+++++.|+..|...++++|.. .++.....+.|.+..+ ...+
T Consensus 31 ~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~v 91 (399)
T 3nzo_A 31 SVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDIS-------------------ENNMVELVRDIRSSFGYINGDF 91 (399)
T ss_dssp HHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHHTCCCSSEE
T ss_pred HHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECC-------------------cchHHHHHHHHHHhcCCCCCcE
Confidence 447789999999 58899999999999998889998742 2344455556666554 2467
Q ss_pred EEeecCCChh-----h--cCCCcEEEEec
Q 001074 251 STLTSKLTKE-----Q--LSDFQAVVFTD 272 (1163)
Q Consensus 251 ~~~~~~l~~e-----~--l~~fdvVI~~~ 272 (1163)
..+..++++. . ..+.|+||-+.
T Consensus 92 ~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A 120 (399)
T 3nzo_A 92 QTFALDIGSIEYDAFIKADGQYDYVLNLS 120 (399)
T ss_dssp EEECCCTTSHHHHHHHHHCCCCSEEEECC
T ss_pred EEEEEeCCCHHHHHHHHHhCCCCEEEECC
Confidence 7777777542 1 24789988654
No 254
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=87.25 E-value=0.9 Score=48.80 Aligned_cols=36 Identities=14% Similarity=0.368 Sum_probs=30.3
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 47 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA------HVVVSSRK 47 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 46678888887 78999999999999997 78887653
No 255
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.23 E-value=3.4 Score=44.85 Aligned_cols=81 Identities=16% Similarity=0.147 Sum_probs=50.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCC-eEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVK-SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg-~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l 257 (1163)
.+|.|||+|.+|..+++.|...|.. +++++|.+. .+++. +.+.. +.... ..++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~-------------------~~~~~----~~~~g--~~~~~-~~~~ 55 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP-------------------ESISK----AVDLG--IIDEG-TTSI 55 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH-------------------HHHHH----HHHTT--SCSEE-ESCG
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH-------------------HHHHH----HHHCC--Ccccc-cCCH
Confidence 4799999999999999999999963 688887532 12221 22221 11011 1111
Q ss_pred ChhhcC-CCcEEEEecCChhHHHHHHHHHH
Q 001074 258 TKEQLS-DFQAVVFTDISLDKAIEFDDFCH 286 (1163)
Q Consensus 258 ~~e~l~-~fdvVI~~~~~~~~~~~ln~~cr 286 (1163)
++.+. ++|+||+|..+......+.++..
T Consensus 56 -~~~~~~~aDvVilavp~~~~~~v~~~l~~ 84 (281)
T 2g5c_A 56 -AKVEDFSPDFVMLSSPVRTFREIAKKLSY 84 (281)
T ss_dssp -GGGGGTCCSEEEECSCHHHHHHHHHHHHH
T ss_pred -HHHhcCCCCEEEEcCCHHHHHHHHHHHHh
Confidence 24567 89999999876555545555443
No 256
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=87.18 E-value=1.5 Score=46.30 Aligned_cols=32 Identities=19% Similarity=0.378 Sum_probs=27.5
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEE-ecCC
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTI-TDDD 613 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~i-vD~D 613 (1163)
.||.|||+|.+|..+++.|+..|. .+++ +|.+
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~------~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQI------PAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTC------CEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------EEEEEECCC
Confidence 589999999999999999999997 6666 6543
No 257
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=87.17 E-value=0.81 Score=50.02 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=31.1
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 65 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGA------QVAVAARH 65 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 46788999998 68999999999999997 78888753
No 258
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=87.16 E-value=0.68 Score=50.47 Aligned_cols=36 Identities=25% Similarity=0.489 Sum_probs=30.2
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~------~V~~~~r~ 59 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA------RILINGTD 59 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEECCSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 46778888887 68999999999999997 78887643
No 259
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=87.16 E-value=0.61 Score=53.30 Aligned_cols=36 Identities=28% Similarity=0.409 Sum_probs=31.7
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|.+++|.|||+|.+|..+++.|...|+ +++.+|..
T Consensus 161 ~l~gktvGIIG~G~IG~~vA~~l~~~G~------~V~~~dr~ 196 (351)
T 3jtm_A 161 DLEGKTIGTVGAGRIGKLLLQRLKPFGC------NLLYHDRL 196 (351)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCC------EEEEECSS
T ss_pred cccCCEEeEEEeCHHHHHHHHHHHHCCC------EEEEeCCC
Confidence 4788999999999999999999999998 68877743
No 260
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=87.14 E-value=1 Score=48.19 Aligned_cols=35 Identities=29% Similarity=0.307 Sum_probs=29.8
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
.+.+++|+|.| .|+||.++++.|+..|. +++++|.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~------~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKA------KVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEcC
Confidence 46778888887 79999999999999997 7888764
No 261
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.11 E-value=1.1 Score=49.56 Aligned_cols=32 Identities=25% Similarity=0.449 Sum_probs=29.0
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 179 SNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 179 s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
.+|.||| +|.+|..+|+.|..+|. .++++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 5899999 99999999999999997 78898864
No 262
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=87.08 E-value=0.56 Score=51.04 Aligned_cols=37 Identities=19% Similarity=0.344 Sum_probs=31.4
Q ss_pred HHHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 570 QKKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 570 q~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
..+|++++++|.| +||||.++++.|+..|. +++++|.
T Consensus 22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~------~V~~~~r 59 (266)
T 3grp_A 22 MFKLTGRKALVTGATGGIGEAIARCFHAQGA------IVGLHGT 59 (266)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 3467888999998 68999999999999997 7888764
No 263
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=87.07 E-value=1.5 Score=47.71 Aligned_cols=66 Identities=11% Similarity=0.119 Sum_probs=44.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCCC
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 258 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l~ 258 (1163)
.+|.|||+|.+|..++++|.. |. +++++|.+. .+++.+.+. .+.+ .. .
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~-------------------~~~~~~~~~------g~~~--~~---~ 49 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTF-------------------EKALRHQEE------FGSE--AV---P 49 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECSST-------------------HHHHHHHHH------HCCE--EC---C
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCH-------------------HHHHHHHHC------CCcc--cC---H
Confidence 379999999999999999999 97 588887421 233332221 1121 11 3
Q ss_pred hhhcCCCcEEEEecCChh
Q 001074 259 KEQLSDFQAVVFTDISLD 276 (1163)
Q Consensus 259 ~e~l~~fdvVI~~~~~~~ 276 (1163)
++.+.++|+||.|..+..
T Consensus 50 ~~~~~~~D~vi~~v~~~~ 67 (289)
T 2cvz_A 50 LERVAEARVIFTCLPTTR 67 (289)
T ss_dssp GGGGGGCSEEEECCSSHH
T ss_pred HHHHhCCCEEEEeCCChH
Confidence 445678999999987654
No 264
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=87.06 E-value=1.2 Score=50.88 Aligned_cols=77 Identities=12% Similarity=0.120 Sum_probs=54.5
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHH-hCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 176 LFASNILVSGMQGLGAEIAKNLIL-AGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvl-aGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
....+|+|||+|+.|..++..|.. .++.+++++|.+ ..|++.+++++.+. +.+.+....
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~-------------------~~~a~~la~~~~~~-~g~~~~~~~ 186 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTD-------------------PLATAKLIANLKEY-SGLTIRRAS 186 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHTTC-TTCEEEECS
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC-------------------HHHHHHHHHHHHhc-cCceEEEeC
Confidence 356799999999999999999864 478999998742 23677777666442 344444332
Q ss_pred cCCChhhcCCCcEEEEecCC
Q 001074 255 SKLTKEQLSDFQAVVFTDIS 274 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~~ 274 (1163)
. .++.+.+.|+||.|+.+
T Consensus 187 ~--~~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 187 S--VAEAVKGVDIITTVTAD 204 (350)
T ss_dssp S--HHHHHTTCSEEEECCCC
T ss_pred C--HHHHHhcCCEEEEeccC
Confidence 1 23567789999998865
No 265
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=86.95 E-value=3.2 Score=46.35 Aligned_cols=109 Identities=12% Similarity=0.101 Sum_probs=65.8
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHh-cCCCEEEEe
Q 001074 176 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTL 253 (1163)
Q Consensus 176 L~~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eL-Np~V~V~~~ 253 (1163)
+...+|+|.|+ |++|..+++.|+..|. +|+++|...-. ...+.+.+.+.+... .+ .++..
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~~--~~~~~ 86 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATG---------------HQRNLDEVRSLVSEKQWS--NFKFI 86 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC---------------CHHHHHHHHHHSCHHHHT--TEEEE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCcc---------------chhhHHHHhhhcccccCC--ceEEE
Confidence 56679999997 9999999999999995 78887753210 011222222222111 12 34555
Q ss_pred ecCCCh-----hhcCCCcEEEEecCCh-----------------hHHHHHHHHHHhcCCCc-eeEEeeecceeE
Q 001074 254 TSKLTK-----EQLSDFQAVVFTDISL-----------------DKAIEFDDFCHNHQPAI-SFIKAEVRGLFG 304 (1163)
Q Consensus 254 ~~~l~~-----e~l~~fdvVI~~~~~~-----------------~~~~~ln~~cr~~~~~I-pfI~~~~~G~~G 304 (1163)
..++++ +.+.+.|+||.+.... .....+-+.|++.+ + .||.+++.+.+|
T Consensus 87 ~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~ 158 (352)
T 1sb8_A 87 QGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK--VQSFTYAASSSTYG 158 (352)
T ss_dssp ECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGT
T ss_pred ECCCCCHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeccHHhcC
Confidence 556543 3467899999765411 11234556777776 4 578777776654
No 266
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=86.91 E-value=1 Score=50.65 Aligned_cols=35 Identities=23% Similarity=0.383 Sum_probs=29.9
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHH--cccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVAL--MGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~--~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++|+|.| +|+||..+++.|+. .|. +++++|..
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~------~V~~~~r~ 45 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA------KVVVLDKF 45 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS------EEEEEECC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC------eEEEEECC
Confidence 4678999997 69999999999999 776 88888753
No 267
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=86.91 E-value=1.5 Score=51.72 Aligned_cols=124 Identities=14% Similarity=0.157 Sum_probs=66.6
Q ss_pred HhcCcEEEEec-CcchHHHHHHHHHc---ccccCCCccEEEecCCcccccCcCcc-cCcccCcccchHHHHHHHHHHhhC
Q 001074 573 LEDAKVFIVGS-GALGCEFLKNVALM---GVSCGNQGKLTITDDDVIEKSNLSRQ-FLFRDWNIGQAKSTVAASAATSIN 647 (1163)
Q Consensus 573 L~~~kVlvVGa-GglGce~lknLa~~---Gv~~~~~g~i~ivD~D~Ie~SNLnRQ-fLf~~~dIG~~Ka~vaa~~l~~~n 647 (1163)
...++|+|.|+ |.||.++++.|+.. |. ++++++...-....+.|. -.+.. |.+. .. +......
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~------~V~~l~R~~~~~~~~~~l~~~~~~---~~~~--~~-~~~~~~~ 138 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDG------RLICLVRAESDEDARRRLEKTFDS---GDPE--LL-RHFKELA 138 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTC------EEEEEECSSSHHHHHHHHHGGGCS---SCHH--HH-HHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCC------EEEEEECCCCcHHHHHHHHHHHHh---cchh--hh-hhhhhhc
Confidence 35679999995 89999999999998 64 788876432111101000 00000 0000 00 0011111
Q ss_pred CCCeEEEEeccCCccc----ccccchhhhccCCEEEEccC-------------chHHHHHHHhhcccccc-cEEecCCCC
Q 001074 648 PRLNIEALQNRVGPET----ENVFDDTFWENITCVINALD-------------NVNARLYVDQRCLYFQK-PLLESGTLG 709 (1163)
Q Consensus 648 p~~~I~~~~~~v~~~~----e~~~~~~f~~~~DvVi~alD-------------n~~aR~~v~~~c~~~~~-PlI~sgt~G 709 (1163)
.-+++.+...+.... ...+ ...++++|+||++.- |+..-..+-+.|...++ .+|..++.+
T Consensus 139 -~~~v~~v~~Dl~~~~~gld~~~~-~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~ 216 (478)
T 4dqv_A 139 -ADRLEVVAGDKSEPDLGLDQPMW-RRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTAD 216 (478)
T ss_dssp -TTTEEEEECCTTSGGGGCCHHHH-HHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGG
T ss_pred -cCceEEEEeECCCcccCCCHHHH-HHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehh
Confidence 135667776665321 0011 234568999998753 44455566777877764 677666544
Q ss_pred c
Q 001074 710 A 710 (1163)
Q Consensus 710 ~ 710 (1163)
.
T Consensus 217 v 217 (478)
T 4dqv_A 217 V 217 (478)
T ss_dssp G
T ss_pred h
Confidence 3
No 268
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=86.85 E-value=3.2 Score=46.99 Aligned_cols=103 Identities=13% Similarity=0.139 Sum_probs=60.3
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCc-ccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEe
Q 001074 176 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVEL-WDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 253 (1163)
Q Consensus 176 L~~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~V~~-sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~ 253 (1163)
++..+|+|.|+ |.+|..+++.|+..|..+|++++...-.. ..+. -.+ .++..
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~------------------------~~~--~v~~~ 83 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP------------------------DHP--AVRFS 83 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC------------------------CCT--TEEEE
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc------------------------CCC--ceEEE
Confidence 45678999995 89999999999999955788887543211 0010 011 34444
Q ss_pred ecCCCh-----hhcCCCcEEEEecCCh-----------------hHHHHHHHHHHhc-CCCceeEEeeecceeEE
Q 001074 254 TSKLTK-----EQLSDFQAVVFTDISL-----------------DKAIEFDDFCHNH-QPAISFIKAEVRGLFGS 305 (1163)
Q Consensus 254 ~~~l~~-----e~l~~fdvVI~~~~~~-----------------~~~~~ln~~cr~~-~~~IpfI~~~~~G~~G~ 305 (1163)
..++++ +.+.++|+||-+.... .....+-+.|++. +. ..||.+++.+.+|.
T Consensus 84 ~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~~V~~SS~~vyg~ 157 (377)
T 2q1s_A 84 ETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRL-KKVVYSAAGCSIAE 157 (377)
T ss_dssp CSCTTCHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSC-CEEEEEEEC-----
T ss_pred ECCCCCHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEEeCCHHHcCC
Confidence 445432 2456788888764311 1123455677776 51 27888887766553
No 269
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=86.85 E-value=0.94 Score=49.27 Aligned_cols=76 Identities=18% Similarity=0.119 Sum_probs=47.7
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
++.+++++|.| .||||.++++.|+..|. +++++|.+.-..+.+.+. . -...+.+.+++.+....+
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~------~V~~~~r~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~-- 73 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA------DIIAVDIAGKLPSCVPYD----P--ASPDDLSETVRLVEAANR-- 73 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCSCCCTTCCSC----C--CCHHHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC------EEEEEecccccccccccc----c--cCHHHHHHHHHHHHhcCC--
Confidence 57788899998 68999999999999998 889988643222222111 1 112344444555555443
Q ss_pred eEEEEeccCCc
Q 001074 651 NIEALQNRVGP 661 (1163)
Q Consensus 651 ~I~~~~~~v~~ 661 (1163)
++..+...+..
T Consensus 74 ~~~~~~~D~~~ 84 (277)
T 3tsc_A 74 RIVAAVVDTRD 84 (277)
T ss_dssp CEEEEECCTTC
T ss_pred eEEEEECCCCC
Confidence 45556555553
No 270
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=86.84 E-value=1.2 Score=49.05 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=30.8
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 176 LFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 176 L~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
+++++|+|.| .||+|..+++.|+..|.. ++++|.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R 151 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGR 151 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEEC
Confidence 5778999999 999999999999999985 999874
No 271
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=86.84 E-value=1.2 Score=48.69 Aligned_cols=36 Identities=14% Similarity=0.342 Sum_probs=30.5
Q ss_pred HHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 571 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 571 ~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
..+.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~------~V~~~~r 57 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGA------NIVLNGF 57 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEECC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 457788899998 68999999999999997 7888764
No 272
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=86.82 E-value=1.9 Score=48.05 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=29.2
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
.||.|||||++|..++-.|++.|.. ++|.++|-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~----~el~L~Di 33 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV----DEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC----SEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC----CEEEEEeC
Confidence 3799999999999999999999985 68998873
No 273
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.81 E-value=2 Score=47.00 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=48.9
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 001074 179 SNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (1163)
Q Consensus 179 s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l 257 (1163)
.+|.|||+ |.+|..++++|...|. +++++|.+. .+++. +.+.. +.+ ..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~-------------------~~~~~----~~~~g--~~~----~~- 60 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAP-------------------EGRDR----LQGMG--IPL----TD- 60 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSH-------------------HHHHH----HHHTT--CCC----CC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCH-------------------HHHHH----HHhcC--CCc----CC-
Confidence 48999999 9999999999999996 788887422 12222 22221 221 11
Q ss_pred ChhhcCCCcEEEEecCChhHHHHHHHH
Q 001074 258 TKEQLSDFQAVVFTDISLDKAIEFDDF 284 (1163)
Q Consensus 258 ~~e~l~~fdvVI~~~~~~~~~~~ln~~ 284 (1163)
..+.+.++|+||.|..+......+.++
T Consensus 61 ~~~~~~~aDvVi~av~~~~~~~v~~~l 87 (286)
T 3c24_A 61 GDGWIDEADVVVLALPDNIIEKVAEDI 87 (286)
T ss_dssp SSGGGGTCSEEEECSCHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCchHHHHHHHHH
Confidence 234677899999998655444444443
No 274
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=86.81 E-value=1.3 Score=47.44 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=29.4
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
+.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~------~V~~~~r 39 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGA------AVAIAAR 39 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEEC
Confidence 5678899998 68999999999999997 7888764
No 275
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=86.80 E-value=1.4 Score=47.32 Aligned_cols=35 Identities=20% Similarity=0.455 Sum_probs=29.8
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~------~V~~~~r~ 42 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA------SVYTCSRN 42 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5677899998 68999999999999997 78888654
No 276
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=86.78 E-value=0.78 Score=50.96 Aligned_cols=33 Identities=18% Similarity=0.410 Sum_probs=28.3
Q ss_pred cCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 575 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 575 ~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+++|+|.| +|+||..+++.|+..|. +++++|.+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~------~V~~~~r~ 38 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY------DVVIADNL 38 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECCC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC------cEEEEecC
Confidence 46899998 69999999999999997 78887653
No 277
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=86.78 E-value=2.3 Score=44.21 Aligned_cols=97 Identities=12% Similarity=0.178 Sum_probs=60.9
Q ss_pred CeEEEEc-CChHHHHHHHHHH-HhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 179 SNILVSG-MQGLGAEIAKNLI-LAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 179 s~VlIiG-~gglGsEiaKNLv-laGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
++|+|.| .|++|.++++.|+ ..|. +|++++.+.-. ++ +.+.+..+ .+.....+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~------------------~~----~~~~~~~~--~~~~~~~D 60 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKT------------------RI----PPEIIDHE--RVTVIEGS 60 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHH------------------HS----CHHHHTST--TEEEEECC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccc------------------cc----hhhccCCC--ceEEEECC
Confidence 4599999 5999999999999 8897 78887753210 11 11112223 34455555
Q ss_pred CCh-----hhcCCCcEEEEecC--ChhHHHHHHHHHHhcCCCc-eeEEeeeccee
Q 001074 257 LTK-----EQLSDFQAVVFTDI--SLDKAIEFDDFCHNHQPAI-SFIKAEVRGLF 303 (1163)
Q Consensus 257 l~~-----e~l~~fdvVI~~~~--~~~~~~~ln~~cr~~~~~I-pfI~~~~~G~~ 303 (1163)
+++ +.+.+.|+||.+.. +.. ...+-+.|++.+ + .+|..++.+.+
T Consensus 61 ~~d~~~~~~~~~~~d~vv~~ag~~n~~-~~~~~~~~~~~~--~~~iv~iSs~~~~ 112 (221)
T 3r6d_A 61 FQNPGXLEQAVTNAEVVFVGAMESGSD-MASIVKALSRXN--IRRVIGVSMAGLS 112 (221)
T ss_dssp TTCHHHHHHHHTTCSEEEESCCCCHHH-HHHHHHHHHHTT--CCEEEEEEETTTT
T ss_pred CCCHHHHHHHHcCCCEEEEcCCCCChh-HHHHHHHHHhcC--CCeEEEEeeceec
Confidence 543 35678899998764 334 555666777776 4 46666665543
No 278
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=86.77 E-value=1.8 Score=46.90 Aligned_cols=96 Identities=15% Similarity=0.096 Sum_probs=56.0
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
.|++++++|.| .||||.++++.|+..|. +++++|.+.-. ..+... .-...+.+.+++.+....+
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~-- 74 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGA------DIIAVDLCDQI-ASVPYP------LATPEELAATVKLVEDIGS-- 74 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCSCC-TTCSSC------CCCHHHHHHHHHHHHHHTC--
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC------eEEEEeccccc-cccccc------ccchHHHHHHHHHHHhcCC--
Confidence 57788999998 68999999999999998 78888864210 001000 0112344445555555544
Q ss_pred eEEEEeccCCcccc--cccc--hhhhccCCEEEEcc
Q 001074 651 NIEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (1163)
Q Consensus 651 ~I~~~~~~v~~~~e--~~~~--~~f~~~~DvVi~al 682 (1163)
++..+...+..... ..+. .+-+..+|++|++.
T Consensus 75 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nA 110 (278)
T 3sx2_A 75 RIVARQADVRDRESLSAALQAGLDELGRLDIVVANA 110 (278)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 56666666664221 1111 01123677777763
No 279
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=86.73 E-value=1.4 Score=52.34 Aligned_cols=37 Identities=24% Similarity=0.371 Sum_probs=29.4
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 173 MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 173 q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
...|.+++|.|||+|..|..+|.+|+..|. .|+++|.
T Consensus 10 ~~~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r 46 (480)
T 2zyd_A 10 HHHMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNR 46 (480)
T ss_dssp -----CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred ccccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeC
Confidence 456788999999999999999999999997 6888874
No 280
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=86.72 E-value=3.8 Score=42.94 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=31.2
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhCCC-eEEEEeCC
Q 001074 176 LFASNILVSG-MQGLGAEIAKNLILAGVK-SVTLHDEG 211 (1163)
Q Consensus 176 L~~s~VlIiG-~gglGsEiaKNLvlaGVg-~itLvD~d 211 (1163)
|...+|+|.| .|++|.++++.|+..|.. ++++++.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcC
Confidence 6678999999 699999999999999974 78888764
No 281
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=86.70 E-value=1.5 Score=47.54 Aligned_cols=101 Identities=17% Similarity=0.193 Sum_probs=64.5
Q ss_pred eEEEEcC-ChHHHHHHHHHHHh-CCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 001074 180 NILVSGM-QGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (1163)
Q Consensus 180 ~VlIiG~-gglGsEiaKNLvla-GVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l 257 (1163)
+|+|+|+ |.+|..+++.+... |..=+.++|.. +|+ +.+....++|-|+...-..
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl---------~~~~~~~~DvvIDfT~p~a 57 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPL---------SLLTDGNTEVVIDFTHPDV 57 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCT---------HHHHHTTCCEEEECSCTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCH---------HHHhccCCcEEEEccChHH
Confidence 7999997 99999999998765 77555577643 111 1122235666665543332
Q ss_pred Chhhc-----CCCcEEEEecC-ChhHHHHHHHHHHhc-CCCceeEEeeecceeEEE
Q 001074 258 TKEQL-----SDFQAVVFTDI-SLDKAIEFDDFCHNH-QPAISFIKAEVRGLFGSV 306 (1163)
Q Consensus 258 ~~e~l-----~~fdvVI~~~~-~~~~~~~ln~~cr~~-~~~IpfI~~~~~G~~G~v 306 (1163)
..+++ .+.++||.++. +.+....|.++|++. + +|++.+..+++...+
T Consensus 58 ~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~--~~vv~a~N~siGv~l 111 (245)
T 1p9l_A 58 VMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPN--TSVLIAPNFAIGAVL 111 (245)
T ss_dssp HHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTSTT--CEEEECSCCCHHHHH
T ss_pred HHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCC--CCEEEECCccHHHHH
Confidence 22222 25678887764 555667888888876 7 888887776664433
No 282
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=86.68 E-value=1.1 Score=48.48 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=30.6
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+.+++|+|.| .|+||.++++.|+..|. +++++|.+
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~------~V~~~~r~ 64 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKS------KLVLWDIN 64 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEEcC
Confidence 36778999998 78999999999999997 78888743
No 283
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=86.66 E-value=0.91 Score=48.83 Aligned_cols=36 Identities=22% Similarity=0.351 Sum_probs=30.1
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~------~V~~~~r~ 40 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGF------TVFAGRRN 40 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 35678899998 67999999999999998 78888754
No 284
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=86.66 E-value=1.4 Score=50.10 Aligned_cols=37 Identities=30% Similarity=0.634 Sum_probs=30.6
Q ss_pred HHhcCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+++.++|+|.|+ |.||..+++.|+..|. -+++++|..
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-----~~V~~~~r~ 66 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGV-----NQVHVVDNL 66 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-----SEEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCC-----ceEEEEECC
Confidence 466789999995 9999999999999992 278887654
No 285
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=86.64 E-value=1.9 Score=46.66 Aligned_cols=63 Identities=21% Similarity=0.416 Sum_probs=47.4
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 176 LFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 176 L~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
|++++|+|.| .||+|.++|+.|+..|. ++.++|.+ ..+.+...+.+.+..+...+....
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 67 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRR-------------------EENVNETIKEIRAQYPDAILQPVV 67 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS-------------------HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCceEEEEe
Confidence 5678888888 57999999999999997 67777642 235666777788877777776666
Q ss_pred cCCC
Q 001074 255 SKLT 258 (1163)
Q Consensus 255 ~~l~ 258 (1163)
.+++
T Consensus 68 ~D~~ 71 (267)
T 3t4x_A 68 ADLG 71 (267)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 5554
No 286
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=86.61 E-value=0.57 Score=54.02 Aligned_cols=37 Identities=30% Similarity=0.428 Sum_probs=35.3
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
+|+..+|+|+|+|..|..+|+.|+.+|+++|+++|..
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 6788999999999999999999999999999999986
No 287
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=86.59 E-value=1.2 Score=47.55 Aligned_cols=35 Identities=23% Similarity=0.451 Sum_probs=29.9
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+++++|+|.| .|+||.++++.|+..|. +++++|.+
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~------~V~~~~r~ 46 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA------RVIIADLD 46 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5678899998 69999999999999997 78887643
No 288
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=86.57 E-value=0.61 Score=51.40 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=30.4
Q ss_pred HhcCcEEEEecCc-chHHHHHHHHHcccccCCCccEEEec
Q 001074 573 LEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 611 (1163)
Q Consensus 573 L~~~kVlvVGaGg-lGce~lknLa~~Gv~~~~~g~i~ivD 611 (1163)
|.+++++|||.|+ +|..+++.|+..|. ++++++
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gA------tVtv~~ 181 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNY------TVSVCH 181 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTC------EEEEEC
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCC------eEEEEe
Confidence 8999999999997 79999999999997 788885
No 289
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=86.55 E-value=0.86 Score=49.42 Aligned_cols=35 Identities=34% Similarity=0.536 Sum_probs=29.7
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
++.+++|+|.| .||||.++++.|+..|. ++++++.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~------~V~~~~r 61 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGL------KVWINYR 61 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 46678899988 68999999999999998 7887764
No 290
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=86.49 E-value=1.4 Score=50.10 Aligned_cols=37 Identities=22% Similarity=0.342 Sum_probs=32.9
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
.|.+++|.|||.|.+|..+++.|...|+ +++.+|...
T Consensus 145 ~l~gktvgIiGlG~IG~~vA~~l~~~G~------~V~~~d~~~ 181 (343)
T 2yq5_A 145 EIYNLTVGLIGVGHIGSAVAEIFSAMGA------KVIAYDVAY 181 (343)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSC
T ss_pred ccCCCeEEEEecCHHHHHHHHHHhhCCC------EEEEECCCh
Confidence 4678999999999999999999999998 888888753
No 291
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=86.46 E-value=4.5 Score=45.09 Aligned_cols=72 Identities=17% Similarity=0.110 Sum_probs=47.6
Q ss_pred eEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHH----hcCCCEEEEee
Q 001074 180 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE----LNNAVVLSTLT 254 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~e----LNp~V~V~~~~ 254 (1163)
+|.|+|+|.+|+.+|..|+..|. .+++++|.+. .|++.....+.+ ......+....
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~~i~~t~ 62 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE-------------------GIPQGKALDMYESGPVGLFDTKVTGSN 62 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHHHHHHHhHHhhhhcccCCcEEEECC
Confidence 79999999999999999998763 5799998642 123322222221 22344555433
Q ss_pred cCCChhhcCCCcEEEEecC
Q 001074 255 SKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~ 273 (1163)
+ . ++ +.+.|+||.+..
T Consensus 63 d-~-~~-l~~aDvViiav~ 78 (310)
T 1guz_A 63 D-Y-AD-TANSDIVIITAG 78 (310)
T ss_dssp C-G-GG-GTTCSEEEECCS
T ss_pred C-H-HH-HCCCCEEEEeCC
Confidence 2 2 23 889999999874
No 292
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=86.46 E-value=1.6 Score=48.73 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=27.7
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
+||-+||.|..|..+++||+..|. .+++.|.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~------~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY------LLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC------EEEEECS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC------eEEEEcC
Confidence 479999999999999999999998 7887753
No 293
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=86.44 E-value=1 Score=49.21 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=32.3
Q ss_pred HHHHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 569 LQKKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 569 ~q~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
....|++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 66 (275)
T 4imr_A 27 TIFGLRGRTALVTGSSRGIGAAIAEGLAGAGA------HVILHGVK 66 (275)
T ss_dssp HHHCCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred ccCCCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 34467888899888 68999999999999997 78888753
No 294
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=86.41 E-value=0.74 Score=48.92 Aligned_cols=61 Identities=16% Similarity=0.200 Sum_probs=42.3
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
+++++++|.| .||||.++++.|+..|. +++++|.+. .+.+.+.+.+.+..+ +
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~------~v~~~~r~~-------------------~~~~~~~~~~~~~~~--~ 55 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA------TVVGTATSQ-------------------ASAEKFENSMKEKGF--K 55 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESSH-------------------HHHHHHHHHHHHTTC--C
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhcCC--c
Confidence 5677888888 68999999999999997 788876532 344555555655443 4
Q ss_pred EEEEeccCC
Q 001074 652 IEALQNRVG 660 (1163)
Q Consensus 652 I~~~~~~v~ 660 (1163)
+..+...+.
T Consensus 56 ~~~~~~D~~ 64 (247)
T 3lyl_A 56 ARGLVLNIS 64 (247)
T ss_dssp EEEEECCTT
T ss_pred eEEEEecCC
Confidence 555555554
No 295
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=86.39 E-value=0.76 Score=49.34 Aligned_cols=64 Identities=16% Similarity=0.197 Sum_probs=45.2
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHH---cccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVAL---MGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINP 648 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~---~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np 648 (1163)
|++++++|.| .||||.++++.|+. .|. +++++|.+. .+.+.+++.+...+|
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~ 58 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS------VMLVSARSE-------------------SMLRQLKEELGAQQP 58 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC------EEEEEESCH-------------------HHHHHHHHHHHHHCT
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC------eEEEEeCCH-------------------HHHHHHHHHHHhhCC
Confidence 4566788887 78999999999999 787 788876432 244455566666666
Q ss_pred CCeEEEEeccCCc
Q 001074 649 RLNIEALQNRVGP 661 (1163)
Q Consensus 649 ~~~I~~~~~~v~~ 661 (1163)
..++..+...+..
T Consensus 59 ~~~~~~~~~Dv~~ 71 (259)
T 1oaa_A 59 DLKVVLAAADLGT 71 (259)
T ss_dssp TSEEEEEECCTTS
T ss_pred CCeEEEEecCCCC
Confidence 6667766666653
No 296
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=86.38 E-value=1.1 Score=48.90 Aligned_cols=36 Identities=22% Similarity=0.355 Sum_probs=30.8
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~ 60 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC------HTVIASRS 60 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC------EEEEEESC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 57788999998 67999999999999997 88888653
No 297
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=86.37 E-value=0.95 Score=48.06 Aligned_cols=34 Identities=24% Similarity=0.391 Sum_probs=29.2
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
+.+++|+|.| .|+||.++++.|+..|. +++++|.
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~------~V~~~~r 43 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGA------SVVVSDI 43 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTC------EEEEEES
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC------EEEEEcC
Confidence 5678899998 58999999999999997 7888764
No 298
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=86.37 E-value=1.3 Score=48.12 Aligned_cols=35 Identities=29% Similarity=0.478 Sum_probs=29.7
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
.|++++++|.| .||||.++++.|+..|. +++++|.
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~~ 63 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGA------AVALTYV 63 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 46788899998 68999999999999998 7777753
No 299
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=86.30 E-value=0.91 Score=49.50 Aligned_cols=83 Identities=12% Similarity=0.199 Sum_probs=55.2
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
.|+++.++|-| ++|||-++++.||..|. ++.++|.+ ..+.+.+++.+++...
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga------~Vv~~~~~-------------------~~~~~~~~~~i~~~g~-- 56 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS------IVVAVELL-------------------EDRLNQIVQELRGMGK-- 56 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHTTC--
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC------EEEEEECC-------------------HHHHHHHHHHHHhcCC--
Confidence 58888888887 78999999999999997 88888743 2356666777776554
Q ss_pred eEEEEeccCCcccc--cccc--hhhhccCCEEEEc
Q 001074 651 NIEALQNRVGPETE--NVFD--DTFWENITCVINA 681 (1163)
Q Consensus 651 ~I~~~~~~v~~~~e--~~~~--~~f~~~~DvVi~a 681 (1163)
++.++...++...+ .+++ .+-|...|++||+
T Consensus 57 ~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNN 91 (254)
T 4fn4_A 57 EVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNN 91 (254)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 45666666654221 1111 1224566666665
No 300
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=86.27 E-value=1.6 Score=48.84 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=29.1
Q ss_pred cEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 577 KVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 577 kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
||.|||+|.+|..++-.|+..|+ +.|+++|-|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l-----~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY-----DDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-----SCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCC-----CEEEEEcCC
Confidence 68999999999999999999888 689999865
No 301
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=86.27 E-value=0.59 Score=51.82 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=33.4
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
+++++|+|+|+||.|..++..|...|+++|+|++.+
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 578999999999999999999999999999999753
No 302
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=86.25 E-value=1.5 Score=49.14 Aligned_cols=39 Identities=23% Similarity=0.251 Sum_probs=28.5
Q ss_pred HHHhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 173 MRRLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 173 q~kL~~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
+..+.+.+|+|.|+ |++|..+++.|+..|...+++++..
T Consensus 41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 34466788999997 9999999999999996678888764
No 303
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.24 E-value=1.2 Score=49.08 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=29.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
.+|.|||+|.+|..++++|+..|. .++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 589999999999999999999997 78888753
No 304
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=86.19 E-value=0.34 Score=58.22 Aligned_cols=78 Identities=15% Similarity=0.204 Sum_probs=51.1
Q ss_pred HHHhcCcEEEEecCcchHHHHHHHHH----cccccC-CCccEEEecCCcccc---cCcCc-c-cCcccC-cccchHHHHH
Q 001074 571 KKLEDAKVFIVGSGALGCEFLKNVAL----MGVSCG-NQGKLTITDDDVIEK---SNLSR-Q-FLFRDW-NIGQAKSTVA 639 (1163)
Q Consensus 571 ~kL~~~kVlvVGaGglGce~lknLa~----~Gv~~~-~~g~i~ivD~D~Ie~---SNLnR-Q-fLf~~~-dIG~~Ka~va 639 (1163)
++|++.||++.|||+-|+.+++.|.. .|+.-. -..+|+++|..=+=. .+|+. | .+.+.. +.| .+
T Consensus 316 k~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~~~A~~~~~~~-----~L 390 (605)
T 1o0s_A 316 KLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAKDMPETT-----SI 390 (605)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTCBSSCCCC-----CH
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCceeCCCCCchHHHHHHHhhcCCCC-----CH
Confidence 46889999999999999999999998 564100 026899999764321 24543 2 222221 222 37
Q ss_pred HHHHHhhCCCCeEE
Q 001074 640 ASAATSINPRLNIE 653 (1163)
Q Consensus 640 a~~l~~~np~~~I~ 653 (1163)
++.++...|++-|-
T Consensus 391 ~eav~~vkpdVlIG 404 (605)
T 1o0s_A 391 LEVIRAARPGALIG 404 (605)
T ss_dssp HHHHHHHCCSEEEE
T ss_pred HHHHhhcCCCEEEE
Confidence 88888878876443
No 305
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=86.17 E-value=0.76 Score=49.48 Aligned_cols=36 Identities=25% Similarity=0.416 Sum_probs=30.4
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|++++++|.| +||||.++++.|+..|. +++++|.+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 39 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA------RVVITGRT 39 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 46778888888 68999999999999997 78887753
No 306
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=86.16 E-value=1.8 Score=48.45 Aligned_cols=34 Identities=21% Similarity=0.589 Sum_probs=29.9
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.||.|||+|.+|..++..|+..|+. ++|+++|-+
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~----~ev~l~Di~ 40 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIA----DEIVLIDAN 40 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 5899999999999999999998863 689999854
No 307
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=86.15 E-value=2.1 Score=49.42 Aligned_cols=89 Identities=15% Similarity=0.169 Sum_probs=59.2
Q ss_pred HHHHHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhh
Q 001074 568 KLQKKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSI 646 (1163)
Q Consensus 568 ~~q~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~ 646 (1163)
.....+++++|+|.| .|+||+++++.|+..|. .+++++|.. ..+...+.+.+.+.
T Consensus 28 ~~~~~~~~k~vLVTGatG~IG~~l~~~L~~~g~-----~~V~~~~r~-------------------~~~~~~~~~~l~~~ 83 (399)
T 3nzo_A 28 ELQSVVSQSRFLVLGGAGSIGQAVTKEIFKRNP-----QKLHVVDIS-------------------ENNMVELVRDIRSS 83 (399)
T ss_dssp HHHHHHHTCEEEEETTTSHHHHHHHHHHHTTCC-----SEEEEECSC-------------------HHHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEEcCChHHHHHHHHHHHHCCC-----CEEEEEECC-------------------cchHHHHHHHHHHh
Confidence 344567899999999 58899999999999996 588887642 22344445555555
Q ss_pred CC--CCeEEEEeccCCcccccccchhhh--ccCCEEEEccC
Q 001074 647 NP--RLNIEALQNRVGPETENVFDDTFW--ENITCVINALD 683 (1163)
Q Consensus 647 np--~~~I~~~~~~v~~~~e~~~~~~f~--~~~DvVi~alD 683 (1163)
.+ ...++.+...+.... . . ..++ .++|+|+++..
T Consensus 84 ~~~~~~~v~~~~~Dl~d~~-~-~-~~~~~~~~~D~Vih~Aa 121 (399)
T 3nzo_A 84 FGYINGDFQTFALDIGSIE-Y-D-AFIKADGQYDYVLNLSA 121 (399)
T ss_dssp TCCCSSEEEEECCCTTSHH-H-H-HHHHHCCCCSEEEECCC
T ss_pred cCCCCCcEEEEEEeCCCHH-H-H-HHHHHhCCCCEEEECCC
Confidence 44 346777777666422 1 1 1222 58899998753
No 308
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.04 E-value=2.1 Score=48.02 Aligned_cols=94 Identities=19% Similarity=0.141 Sum_probs=57.9
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
..+|.|||+|.+|..+++.|+..|.. .+|+++|.+.- +.+.+. +.. +....
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~----~~V~~~dr~~~-------------------~~~~a~----~~G--~~~~~ 83 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFK----GKIYGYDINPE-------------------SISKAV----DLG--IIDEG 83 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCC----SEEEEECSCHH-------------------HHHHHH----HTT--SCSEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCC----CEEEEEECCHH-------------------HHHHHH----HCC--Ccchh
Confidence 36899999999999999999999971 47888875431 222211 111 10000
Q ss_pred EeccCCcccccccchh-hhccCCEEEEccCchHHHHHHHhhc--ccccccEEecCC
Q 001074 655 LQNRVGPETENVFDDT-FWENITCVINALDNVNARLYVDQRC--LYFQKPLLESGT 707 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~-f~~~~DvVi~alDn~~aR~~v~~~c--~~~~~PlI~sgt 707 (1163)
..+. .+ ..+++|+||.|+-....+..+.+.. ...+..+++.++
T Consensus 84 -----~~~~-----~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~d~~S 129 (314)
T 3ggo_A 84 -----TTSI-----AKVEDFSPDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGS 129 (314)
T ss_dssp -----ESCT-----TGGGGGCCSEEEECSCGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred -----cCCH-----HHHhhccCCEEEEeCCHHHHHHHHHHHhhccCCCcEEEECCC
Confidence 0111 23 4678999999997666666555443 234555666554
No 309
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=85.98 E-value=0.66 Score=51.37 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=28.8
Q ss_pred hcCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 574 EDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 574 ~~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
++++|+|.|+ |+||..+++.|+..|. +++++|.+
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~------~V~~~~r~ 36 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGY------EVYGADRR 36 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEECC
Confidence 4678999996 9999999999999997 78888753
No 310
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=85.98 E-value=0.72 Score=51.49 Aligned_cols=35 Identities=11% Similarity=0.275 Sum_probs=31.6
Q ss_pred HHhcCcEEEEecCc-chHHHHHHHHHcccccCCCccEEEecC
Q 001074 572 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 572 kL~~~kVlvVGaGg-lGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
.|.+++++|||.|+ +|..++..|+..|. ++++++.
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~~~ 197 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENA------TVTIVHS 197 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC------EEEEECT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC------eEEEEeC
Confidence 57899999999998 79999999999997 7898874
No 311
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=85.94 E-value=5.8 Score=44.11 Aligned_cols=73 Identities=16% Similarity=0.197 Sum_probs=49.5
Q ss_pred eEEEEc-CChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHH---hcCCCEEEEee
Q 001074 180 NILVSG-MQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE---LNNAVVLSTLT 254 (1163)
Q Consensus 180 ~VlIiG-~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~e---LNp~V~V~~~~ 254 (1163)
||+|+| +|.+|..++..|+..|. .++.|+|.. .+ ..|++....-|.. +...+++..
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~----~~-------------~~~~~~~~~dl~~~~~~~~~~~v~~-- 62 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIP----DK-------------EDDTVGQAADTNHGIAYDSNTRVRQ-- 62 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCG----GG-------------HHHHHHHHHHHHHHHTTTCCCEEEE--
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCC----CC-------------hhhHHHHHHHHHHHHhhCCCcEEEe--
Confidence 799999 99999999999998885 458988850 00 1123222233333 355667765
Q ss_pred cCCChhhcCCCcEEEEecC
Q 001074 255 SKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~ 273 (1163)
. +.+.+.+.|+||.+..
T Consensus 63 ~--~~~a~~~aDvVi~~ag 79 (303)
T 1o6z_A 63 G--GYEDTAGSDVVVITAG 79 (303)
T ss_dssp C--CGGGGTTCSEEEECCC
T ss_pred C--CHHHhCCCCEEEEcCC
Confidence 2 3567889999998764
No 312
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=85.90 E-value=2.1 Score=45.80 Aligned_cols=62 Identities=23% Similarity=0.220 Sum_probs=43.6
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCC-CEEEE
Q 001074 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNA-VVLST 252 (1163)
Q Consensus 175 kL~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~-V~V~~ 252 (1163)
.++++.|+|.| .||+|.++|+.|+..|. ++.++|.+ ..+++.+.+.+.+.++. ..+..
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 63 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARS-------------------KQNLEKVHDEIMRSNKHVQEPIV 63 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESC-------------------HHHHHHHHHHHHHHCTTSCCCEE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHHhccccCcceE
Confidence 35678899998 58999999999999998 78887742 23566667777776654 34444
Q ss_pred eecC
Q 001074 253 LTSK 256 (1163)
Q Consensus 253 ~~~~ 256 (1163)
...+
T Consensus 64 ~~~D 67 (250)
T 3nyw_A 64 LPLD 67 (250)
T ss_dssp EECC
T ss_pred Eecc
Confidence 3333
No 313
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=85.88 E-value=0.81 Score=51.07 Aligned_cols=34 Identities=12% Similarity=0.226 Sum_probs=30.4
Q ss_pred HHhcCcEEEEecCc-chHHHHHHHHHcccccCCCccEEEec
Q 001074 572 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 611 (1163)
Q Consensus 572 kL~~~kVlvVGaGg-lGce~lknLa~~Gv~~~~~g~i~ivD 611 (1163)
.+.+++|+|||.|. +|..+++.|+..|. +++++|
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~h 196 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNA------TVTTCH 196 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC------EEEEEC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCC------eEEEEE
Confidence 47789999999996 79999999999996 799886
No 314
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=85.88 E-value=0.38 Score=53.72 Aligned_cols=32 Identities=22% Similarity=0.173 Sum_probs=28.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
.+|+|+|+|++|+.+|..|..+|. .+++++.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcC
Confidence 589999999999999999999996 78888754
No 315
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=85.87 E-value=1.4 Score=48.26 Aligned_cols=36 Identities=17% Similarity=0.203 Sum_probs=29.5
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+.++.++|.| .||||.++++.|+..|. +++++|.+
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 61 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGV------TVGALGRT 61 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 46778899998 68999999999999997 78888753
No 316
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.84 E-value=1.4 Score=45.47 Aligned_cols=92 Identities=14% Similarity=0.097 Sum_probs=58.1
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCCC
Q 001074 180 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 258 (1163)
Q Consensus 180 ~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l~ 258 (1163)
+|+|.|+ |++|.++++.|+..|. ++++++.+. .+ +.++.+.+.+ ...+++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~-------~~~~~~~~~~--~~~D~~ 52 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNA-------------------GK-------ITQTHKDINI--LQKDIF 52 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCS-------------------HH-------HHHHCSSSEE--EECCGG
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCc-------------------hh-------hhhccCCCeE--Eecccc
Confidence 6999995 8999999999999994 788877531 11 1222244433 333332
Q ss_pred ---hhhcCCCcEEEEecCC--------hhHHHHHHHHHHhcCCCceeEEeeecc
Q 001074 259 ---KEQLSDFQAVVFTDIS--------LDKAIEFDDFCHNHQPAISFIKAEVRG 301 (1163)
Q Consensus 259 ---~e~l~~fdvVI~~~~~--------~~~~~~ln~~cr~~~~~IpfI~~~~~G 301 (1163)
.+.+.++|+||.+... ......+-+.|++.+. ..+|..++.+
T Consensus 53 d~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~-~~~v~~SS~~ 105 (221)
T 3ew7_A 53 DLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVS-PRLLVVGGAA 105 (221)
T ss_dssp GCCHHHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCS-SEEEEECCCC
T ss_pred ChhhhhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCC-ceEEEEecce
Confidence 2467789999987542 2333566677877742 4566655543
No 317
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=85.82 E-value=0.48 Score=47.73 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=29.5
Q ss_pred cEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 577 KVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 577 kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
+|+|||+|.+|++++..|++.|. +++|+|...
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~------~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGL------KVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC------CEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCC------cEEEEeCCC
Confidence 79999999999999999999997 899999754
No 318
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=85.79 E-value=1.5 Score=46.21 Aligned_cols=81 Identities=14% Similarity=0.123 Sum_probs=48.7
Q ss_pred cCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEE
Q 001074 575 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (1163)
Q Consensus 575 ~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~ 653 (1163)
.++++|.| +||||.++++.|+..|. +++++|.+. .+.+.+++.+.+.. ..++.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~-~~~~~ 55 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY------ALALGARSV-------------------DRLEKIAHELMQEQ-GVEVF 55 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHHH-CCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhhc-CCeEE
Confidence 45788888 68999999999999997 688876432 24444445554222 23566
Q ss_pred EEeccCCcccc--cccc--hhhhccCCEEEEc
Q 001074 654 ALQNRVGPETE--NVFD--DTFWENITCVINA 681 (1163)
Q Consensus 654 ~~~~~v~~~~e--~~~~--~~f~~~~DvVi~a 681 (1163)
.+...+..... ..+. .+-+..+|++|++
T Consensus 56 ~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~ 87 (235)
T 3l77_A 56 YHHLDVSKAESVEEFSKKVLERFGDVDVVVAN 87 (235)
T ss_dssp EEECCTTCHHHHHHHCC-HHHHHSSCSEEEEC
T ss_pred EEEeccCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 66666654221 1111 0112367777776
No 319
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=85.79 E-value=0.52 Score=51.42 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=32.9
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
+++ +|+|+|+||.|..++..|...|+++|++++.+.
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 467 999999999999999999999999999998654
No 320
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=85.78 E-value=1.1 Score=48.54 Aligned_cols=66 Identities=17% Similarity=0.203 Sum_probs=43.7
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
.+++++++|.| .||||.++++.|+..|. +++++|... ....+.+.+++.+.... .
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~------~V~~~~r~~----------------~~~~~~~~~~~~~~~~~--~ 63 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESV------NLVLHYHQA----------------KDSDTANKLKDELEDQG--A 63 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSC------EEEEEESCG----------------GGHHHHHHHHHHHHTTT--C
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEecCc----------------cCHHHHHHHHHHHHhcC--C
Confidence 35678899998 68999999999999997 777775321 12234444555555443 3
Q ss_pred eEEEEeccCCc
Q 001074 651 NIEALQNRVGP 661 (1163)
Q Consensus 651 ~I~~~~~~v~~ 661 (1163)
++..+...+..
T Consensus 64 ~~~~~~~Dv~d 74 (262)
T 3ksu_A 64 KVALYQSDLSN 74 (262)
T ss_dssp EEEEEECCCCS
T ss_pred cEEEEECCCCC
Confidence 55666655553
No 321
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=85.69 E-value=1.1 Score=49.51 Aligned_cols=100 Identities=19% Similarity=0.228 Sum_probs=0.0
Q ss_pred hcCcEEEEec-CcchHHHHHHHH-HcccccCCCccEE-EecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCC
Q 001074 574 EDAKVFIVGS-GALGCEFLKNVA-LMGVSCGNQGKLT-ITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (1163)
Q Consensus 574 ~~~kVlvVGa-GglGce~lknLa-~~Gv~~~~~g~i~-ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~ 650 (1163)
++.||.|+|| |.+|..+++.++ .-|+ .|+ ++|.+.-...--.-.-+..-...|
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~------elva~~d~~~~~~~g~d~~~~~g~~~~~------------------ 59 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGV------QLGAALEREGSSLLGSDAGELAGAGKTG------------------ 59 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTE------ECCCEECCTTCTTCSCCTTCSSSSSCCS------------------
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEecCchhhhhhhHHHHcCCCcCC------------------
Q ss_pred eEEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecCCCCc
Q 001074 651 NIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGA 710 (1163)
Q Consensus 651 ~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sgt~G~ 710 (1163)
-.....+ ++.+.++|+||+++ ++.+-..+-..|.++++|+| .||.|+
T Consensus 60 ---------v~~~~dl--~~~l~~~DvVIDft-~p~~~~~~~~~a~~~G~~vV-igTtG~ 106 (273)
T 1dih_A 60 ---------VTVQSSL--DAVKDDFDVFIDFT-RPEGTLNHLAFCRQHGKGMV-IGTTGF 106 (273)
T ss_dssp ---------CCEESCS--TTTTTSCSEEEECS-CHHHHHHHHHHHHHTTCEEE-ECCCCC
T ss_pred ---------ceecCCH--HHHhcCCCEEEEcC-ChHHHHHHHHHHHhCCCCEE-EECCCC
No 322
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=85.68 E-value=1.2 Score=49.59 Aligned_cols=31 Identities=23% Similarity=0.078 Sum_probs=27.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
..+|+|+|+|++|+.++..|. +|. .+++++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~-~V~~~~r 32 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYH-DVTVVTR 32 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCC-ceEEEEC
Confidence 358999999999999999999 884 7888875
No 323
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=85.64 E-value=0.98 Score=50.50 Aligned_cols=32 Identities=28% Similarity=0.337 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
.+|+|+|+|++|+.+|..|..+|. .++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 589999999999999999999995 89998864
No 324
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=85.62 E-value=0.98 Score=49.19 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=29.9
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 61 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGA------MVIGTATT 61 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 46777888887 68999999999999997 78887643
No 325
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=85.59 E-value=1.4 Score=47.68 Aligned_cols=36 Identities=14% Similarity=0.236 Sum_probs=27.9
Q ss_pred HHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 571 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 571 ~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
.++.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~------~V~~~~r 43 (276)
T 1mxh_A 7 EASECPAAVITGGARRIGHSIAVRLHQQGF------RVVVHYR 43 (276)
T ss_dssp ----CCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 456777888887 78999999999999997 7888764
No 326
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=85.59 E-value=2 Score=47.88 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=29.5
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.||.|+|+|.+|..++..|+..|.. ++|+++|.+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~----~~v~L~D~~ 34 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV----DEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEECC
Confidence 3799999999999999999999973 489998754
No 327
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=85.56 E-value=1.8 Score=48.00 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=29.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
..+|.|||+|.+|..+|++|+..|. .++++|.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECC
Confidence 4689999999999999999999997 78888753
No 328
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=85.55 E-value=2.8 Score=45.43 Aligned_cols=63 Identities=21% Similarity=0.236 Sum_probs=42.8
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEe
Q 001074 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 253 (1163)
Q Consensus 175 kL~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~ 253 (1163)
.|++++|+|.| .||+|.++++.|+..|. +|.+++.+. .+.+.+.+.+++......+...
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 88 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTV-------------------GNIEELAAECKSAGYPGTLIPY 88 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHTTCSSEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCh-------------------HHHHHHHHHHHhcCCCceEEEE
Confidence 46778999997 68999999999999997 677776431 2444555556555443445554
Q ss_pred ecCC
Q 001074 254 TSKL 257 (1163)
Q Consensus 254 ~~~l 257 (1163)
..++
T Consensus 89 ~~Dl 92 (279)
T 1xg5_A 89 RCDL 92 (279)
T ss_dssp ECCT
T ss_pred EecC
Confidence 4444
No 329
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=85.54 E-value=1.3 Score=48.56 Aligned_cols=35 Identities=17% Similarity=0.384 Sum_probs=30.3
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
++.+++|+|.| .|+||.++++.|+..|. +++++|.
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~------~V~~~~r 50 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGS------NVVIASR 50 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 56788999998 68999999999999997 7888764
No 330
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=85.52 E-value=1.9 Score=48.56 Aligned_cols=33 Identities=27% Similarity=0.431 Sum_probs=29.6
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.||.|||+|.+|..++..|+..|. ..++++|-|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~-----~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNL-----GDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEeCC
Confidence 589999999999999999999998 459999865
No 331
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=85.52 E-value=1.9 Score=48.22 Aligned_cols=93 Identities=14% Similarity=0.110 Sum_probs=58.3
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 176 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 176 L~~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
|...+|+|.|+ |.+|..+++.|...| .++++++.+.-. ...|+.. .+.+.. +. ++...
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~---------------~~~~~~~-~~~l~~--~~--v~~~~ 66 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPR---------------SPSKAKI-FKALED--KG--AIIVY 66 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCC---------------CHHHHHH-HHHHHH--TT--CEEEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCC---------------ChhHHHH-HHHHHh--CC--cEEEE
Confidence 44679999998 899999999999999 567777653200 0112221 122222 33 34445
Q ss_pred cCCCh-----hhcC--CCcEEEEecC--ChhHHHHHHHHHHhcC
Q 001074 255 SKLTK-----EQLS--DFQAVVFTDI--SLDKAIEFDDFCHNHQ 289 (1163)
Q Consensus 255 ~~l~~-----e~l~--~fdvVI~~~~--~~~~~~~ln~~cr~~~ 289 (1163)
.++++ +.+. +.|+||.+.. +......+-+.|++.+
T Consensus 67 ~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g 110 (346)
T 3i6i_A 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVG 110 (346)
T ss_dssp CCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHC
T ss_pred eecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcC
Confidence 55543 3466 8999998765 5566677788888876
No 332
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=85.50 E-value=2.4 Score=45.62 Aligned_cols=75 Identities=15% Similarity=0.128 Sum_probs=47.3
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCCCh
Q 001074 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLTK 259 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l~~ 259 (1163)
+|.|||+|.+|..++++|+..|. .++++|... . ..++ +.+.+. .+. .+ ..
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~-~V~~~~~~~--------~---------~~~~----~~~~~~--g~~-----~~-~~ 51 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGR--------S---------PSTI----ERARTV--GVT-----ET-SE 51 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTC--------C---------HHHH----HHHHHH--TCE-----EC-CH
T ss_pred eEEEEechHHHHHHHHHHHHCCC-eEEEeCCcc--------C---------HHHH----HHHHHC--CCc-----CC-HH
Confidence 79999999999999999999997 677654310 0 0112 233332 222 11 23
Q ss_pred hhcCCCcEEEEecCChhHHHHHHHH
Q 001074 260 EQLSDFQAVVFTDISLDKAIEFDDF 284 (1163)
Q Consensus 260 e~l~~fdvVI~~~~~~~~~~~ln~~ 284 (1163)
+.+.+.|+||+|..+......+.++
T Consensus 52 ~~~~~aDvvi~~v~~~~~~~~~~~~ 76 (264)
T 1i36_A 52 EDVYSCPVVISAVTPGVALGAARRA 76 (264)
T ss_dssp HHHHTSSEEEECSCGGGHHHHHHHH
T ss_pred HHHhcCCEEEEECCCHHHHHHHHHH
Confidence 4567899999998765444444443
No 333
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=85.46 E-value=4.7 Score=47.61 Aligned_cols=32 Identities=28% Similarity=0.395 Sum_probs=29.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
.+|.|||+|.+|+.+|.+|+.+|. .++++|.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 579999999999999999999997 79999864
No 334
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=85.45 E-value=1.4 Score=47.39 Aligned_cols=36 Identities=19% Similarity=0.368 Sum_probs=30.2
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGT------AIALLDMN 40 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 36678899998 68999999999999997 78887643
No 335
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=85.42 E-value=2.5 Score=47.80 Aligned_cols=73 Identities=15% Similarity=0.161 Sum_probs=48.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHH----HhcCCCEEEEee
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQ----ELNNAVVLSTLT 254 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~----eLNp~V~V~~~~ 254 (1163)
.+|.|+|+|.+|..+|..|+..|.-.++|+|.+. .|++.....+. .+....++....
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~~i~~t~ 70 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK-------------------GMPEGKALDLSHVTSVVDTNVSVRAEY 70 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS-------------------SHHHHHHHHHHHHHHHTTCCCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh-------------------hHHHHHHHHHHhhhhccCCCCEEEEeC
Confidence 5899999999999999999999985599998642 13333222222 222233444322
Q ss_pred cCCChhhcCCCcEEEEec
Q 001074 255 SKLTKEQLSDFQAVVFTD 272 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~ 272 (1163)
++ ++.+.+.|+||.+.
T Consensus 71 -d~-~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 71 -SY-EAALTGADCVIVTA 86 (331)
T ss_dssp -SH-HHHHTTCSEEEECC
T ss_pred -CH-HHHhCCCCEEEEcc
Confidence 22 23578999999886
No 336
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=85.37 E-value=1.3 Score=47.02 Aligned_cols=36 Identities=25% Similarity=0.399 Sum_probs=30.1
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+.+++|+|.| .|+||.++++.|+..|. +++++|.+
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~------~V~~~~r~ 40 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGA------KVGLHGRK 40 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEECCC
Confidence 35678888887 69999999999999997 78887754
No 337
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=85.34 E-value=4.7 Score=44.98 Aligned_cols=37 Identities=16% Similarity=0.045 Sum_probs=31.4
Q ss_pred HHhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 174 RRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 174 ~kL~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
..|.+.+|+|.| .|++|..+++.|...|. +|++++..
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 356778999999 59999999999999996 78888764
No 338
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=85.28 E-value=1.5 Score=49.27 Aligned_cols=88 Identities=16% Similarity=0.187 Sum_probs=52.8
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCe
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~ 651 (1163)
+.+++|+|.| .||||.++++.|+..|. ++++++.+.. +....+.+.+++.+....+ +
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~------~V~~~~r~~~--------------~r~~~~~~~l~~~~~~~~~--~ 60 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGH------RVYASMRDIV--------------GRNASNVEAIAGFARDNDV--D 60 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESCTT--------------TTTHHHHHHHHHHHHHHTC--C
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEecCccc--------------ccCHHHHHHHHHHHHhcCC--c
Confidence 4567788888 69999999999999997 7777765432 1123455555665555443 4
Q ss_pred EEEEeccCCcccc--cccc--hhhhccCCEEEEcc
Q 001074 652 IEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (1163)
Q Consensus 652 I~~~~~~v~~~~e--~~~~--~~f~~~~DvVi~al 682 (1163)
+..+...++.... ..++ .+-+..+|+||++.
T Consensus 61 ~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnA 95 (324)
T 3u9l_A 61 LRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNA 95 (324)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred EEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 5666666654221 1110 01123788888774
No 339
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=85.27 E-value=0.44 Score=54.97 Aligned_cols=37 Identities=32% Similarity=0.519 Sum_probs=34.9
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+|...||+|+|+|..|..+++.|..+|+ ++|+++|.+
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~-----~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGV-----KNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEECC
Confidence 5788999999999999999999999998 899999976
No 340
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=85.25 E-value=1.4 Score=48.59 Aligned_cols=36 Identities=22% Similarity=0.311 Sum_probs=31.2
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+|++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~------~V~~~~~~ 82 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGA------DVAINYLP 82 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECCG
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 57888999998 68999999999999997 78887654
No 341
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=85.24 E-value=0.32 Score=58.05 Aligned_cols=78 Identities=17% Similarity=0.274 Sum_probs=51.1
Q ss_pred HHHhcCcEEEEecCcchHHHHHHHHH----cccccC-CCccEEEecCCcccc---cCcCc-c-cCcccC-cccchHHHHH
Q 001074 571 KKLEDAKVFIVGSGALGCEFLKNVAL----MGVSCG-NQGKLTITDDDVIEK---SNLSR-Q-FLFRDW-NIGQAKSTVA 639 (1163)
Q Consensus 571 ~kL~~~kVlvVGaGglGce~lknLa~----~Gv~~~-~~g~i~ivD~D~Ie~---SNLnR-Q-fLf~~~-dIG~~Ka~va 639 (1163)
++|++.||++.|||+-|+.+++.|.. .|+.-. -..+|+++|..=+=. .+|+. | .+.+.. +.+ .+
T Consensus 278 k~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~~~~-----~L 352 (555)
T 1gq2_A 278 NRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCEMK-----NL 352 (555)
T ss_dssp SCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCCCCC-----CH
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcCCCC-----CH
Confidence 47889999999999999999999998 675100 026899999754311 24543 2 222221 222 37
Q ss_pred HHHHHhhCCCCeEE
Q 001074 640 ASAATSINPRLNIE 653 (1163)
Q Consensus 640 a~~l~~~np~~~I~ 653 (1163)
.+.++...|++-|-
T Consensus 353 ~eav~~vkp~vlIG 366 (555)
T 1gq2_A 353 EDIVKDIKPTVLIG 366 (555)
T ss_dssp HHHHHHHCCSEEEE
T ss_pred HHHHhhcCCCEEEE
Confidence 78888777876443
No 342
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=85.20 E-value=2.2 Score=47.50 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=29.9
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.||.|||+|.+|..++..|+..|.. +.++++|.|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~----~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSC----SELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 3799999999999999999999862 589999865
No 343
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=85.20 E-value=2 Score=47.40 Aligned_cols=35 Identities=29% Similarity=0.318 Sum_probs=28.7
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 176 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 176 L~~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
|++.+|+|.|+ |++|..+++.|+..|. +|+++|..
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRR 36 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 35678999996 9999999999999995 78887753
No 344
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=85.20 E-value=1.4 Score=49.05 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=32.0
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTV 213 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V 213 (1163)
....+|.|||+|.+|..+|++|+..|. .++++|.+.-
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~ 55 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLS 55 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHH
Confidence 344689999999999999999999997 8999987653
No 345
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=85.19 E-value=3.3 Score=45.71 Aligned_cols=96 Identities=16% Similarity=0.159 Sum_probs=57.8
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCCC
Q 001074 180 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 258 (1163)
Q Consensus 180 ~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l~ 258 (1163)
+|+|.|+ |.+|..+++.|+..|. +|++++...-....+.. + .++....+++
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~-------------------------~--~~~~~~~Dl~ 66 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAY-------------------------L--EPECRVAEML 66 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGG-------------------------G--CCEEEECCTT
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhcc-------------------------C--CeEEEEecCC
Confidence 7999995 9999999999999994 78888764322111110 1 2233334443
Q ss_pred h-----hhcCCCcEEEEecCC---------------hhHHHHHHHHHHhcCCCceeEEeeecceeE
Q 001074 259 K-----EQLSDFQAVVFTDIS---------------LDKAIEFDDFCHNHQPAISFIKAEVRGLFG 304 (1163)
Q Consensus 259 ~-----e~l~~fdvVI~~~~~---------------~~~~~~ln~~cr~~~~~IpfI~~~~~G~~G 304 (1163)
+ +.+.+.|+||.+... ......+-+.|++.+. ..||.+++.+.+|
T Consensus 67 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~v~~SS~~~~~ 131 (342)
T 2x4g_A 67 DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARV-PRILYVGSAYAMP 131 (342)
T ss_dssp CHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTC-SCEEEECCGGGSC
T ss_pred CHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-CeEEEECCHHhhC
Confidence 2 235567877765321 1123456677877761 2678877777654
No 346
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=85.11 E-value=1 Score=49.22 Aligned_cols=37 Identities=19% Similarity=0.316 Sum_probs=30.4
Q ss_pred HHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 571 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 571 ~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
..|++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~------~V~~~~r~ 62 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGC------HVLCADID 62 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 357788889887 68999999999999997 88888753
No 347
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=85.11 E-value=1.5 Score=47.20 Aligned_cols=35 Identities=31% Similarity=0.468 Sum_probs=29.9
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
.+++++|+|.| .|+||.++++.|+..|. +++++|.
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~------~V~~~~r 48 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGA------KVVIADI 48 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEcC
Confidence 35678899998 68999999999999997 7888764
No 348
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=85.09 E-value=0.95 Score=51.97 Aligned_cols=84 Identities=13% Similarity=0.296 Sum_probs=0.0
Q ss_pred HhcCcEEEEecCcchHHHHHHHHHcccccCCCcc-EEEecCCcccccCcCcccCcccCcccchHHHHHHH-------HHH
Q 001074 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGK-LTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAAS-------AAT 644 (1163)
Q Consensus 573 L~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~-i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~-------~l~ 644 (1163)
|.+++|.|||+|.+|..+++.|...|+ + ++++|.... +.+.+.+ .+.
T Consensus 162 l~g~tvgIIG~G~IG~~vA~~l~~~G~------~~V~~~d~~~~-------------------~~~~~~~~g~~~~~~l~ 216 (364)
T 2j6i_A 162 IEGKTIATIGAGRIGYRVLERLVPFNP------KELLYYDYQAL-------------------PKDAEEKVGARRVENIE 216 (364)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCC------SEEEEECSSCC-------------------CHHHHHHTTEEECSSHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCC------cEEEEECCCcc-------------------chhHHHhcCcEecCCHH
Q ss_pred hhCCCCeEEEEeccCCcccccccchhhhccCC---EEEEc
Q 001074 645 SINPRLNIEALQNRVGPETENVFDDTFWENIT---CVINA 681 (1163)
Q Consensus 645 ~~np~~~I~~~~~~v~~~~e~~~~~~f~~~~D---vVi~a 681 (1163)
+.-+...|.......++++.++++.+.+.... ++||+
T Consensus 217 ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~ 256 (364)
T 2j6i_A 217 ELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNT 256 (364)
T ss_dssp HHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEEC
T ss_pred HHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEEC
No 349
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=85.07 E-value=2.5 Score=47.50 Aligned_cols=73 Identities=21% Similarity=0.277 Sum_probs=49.9
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhC---CCCeE
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSIN---PRLNI 652 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~n---p~~~I 652 (1163)
.||.|||+|.+|..++-.|+..|.. ..|+++|-| ..|++..+..+.... +.+++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~----~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~v 62 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIA----EEFVIVDVV-------------------KDRTKGDALDLEDAQAFTAPKKI 62 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSS-------------------HHHHHHHHHHHHGGGGGSCCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCC----CEEEEEeCC-------------------chHHHHHHHHHHHHHHhcCCeEE
Confidence 6899999999999999999999873 579988742 234444344444332 44555
Q ss_pred EEEeccCCcccccccchhhhccCCEEEEccC
Q 001074 653 EALQNRVGPETENVFDDTFWENITCVINALD 683 (1163)
Q Consensus 653 ~~~~~~v~~~~e~~~~~~f~~~~DvVi~alD 683 (1163)
.+ +. .+-+++.|+||.+..
T Consensus 63 ~~-----~~-------~~a~~~aDvVii~ag 81 (318)
T 1ez4_A 63 YS-----GE-------YSDCKDADLVVITAG 81 (318)
T ss_dssp EE-----CC-------GGGGTTCSEEEECCC
T ss_pred EE-----CC-------HHHhCCCCEEEECCC
Confidence 53 11 123689999998864
No 350
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=85.06 E-value=0.76 Score=53.10 Aligned_cols=38 Identities=32% Similarity=0.392 Sum_probs=36.0
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
+++..+|+|+|+|..|..+|+.|+.+|+++|+++|..-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 67889999999999999999999999999999999874
No 351
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=85.05 E-value=1.6 Score=47.21 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=31.4
Q ss_pred HHhcCcEEEEecC---cchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSG---ALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaG---glGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|+++.++|-|++ |||-++++.|+..|. +++++|.+
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga------~Vvi~~r~ 41 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA------KLVFTYRK 41 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCC------EEEEEECC
Confidence 4788999999974 899999999999998 89998754
No 352
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=85.04 E-value=0.93 Score=50.23 Aligned_cols=34 Identities=18% Similarity=0.368 Sum_probs=30.7
Q ss_pred HHhcCcEEEEecCc-chHHHHHHHHHcccccCCCccEEEec
Q 001074 572 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 611 (1163)
Q Consensus 572 kL~~~kVlvVGaGg-lGce~lknLa~~Gv~~~~~g~i~ivD 611 (1163)
.|.+++++|||+|+ +|..++..|+..|. ++++++
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA------tVtv~h 191 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGA------TVSVCH 191 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC------EEEEEC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC------eEEEEe
Confidence 47899999999998 79999999999997 788886
No 353
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=85.01 E-value=2.4 Score=47.40 Aligned_cols=31 Identities=23% Similarity=0.236 Sum_probs=26.5
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEE
Q 001074 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLH 208 (1163)
Q Consensus 177 ~~s~VlIiG~gglGsEiaKNLvlaGVg~itLv 208 (1163)
...+|+|+|+|++|+.+|..|+.+|. .++++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE
Confidence 45789999999999999999999996 67776
No 354
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=84.94 E-value=0.59 Score=52.33 Aligned_cols=36 Identities=11% Similarity=0.147 Sum_probs=30.7
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHc-ccccCCCccEEEecC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALM-GVSCGNQGKLTITDD 612 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~-Gv~~~~~g~i~ivD~ 612 (1163)
+....+|.|||+|.+|..++++|+.. |+ .+++++|.
T Consensus 132 ~~~~~~igiIG~G~~g~~~a~~l~~~~g~-----~~V~v~dr 168 (312)
T 2i99_A 132 PPSSEVLCILGAGVQAYSHYEIFTEQFSF-----KEVRIWNR 168 (312)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHCCC-----SEEEEECS
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHHhCCC-----cEEEEEcC
Confidence 44567999999999999999999987 87 68888764
No 355
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=84.94 E-value=1.4 Score=49.52 Aligned_cols=73 Identities=18% Similarity=0.185 Sum_probs=48.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcC---CCEEEEe
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN---AVVLSTL 253 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp---~V~V~~~ 253 (1163)
..+|.|+|+|.+|..++-.|+..|. ++|.|+|-+. .|++..+..|.+..| .+++..
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~i~~- 66 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK-------------------EKAIGEAMDINHGLPFMGQMSLYA- 66 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC----------------------CCHHHHHHTTSCCCTTCEEEC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------HHHHHHHHHHHHhHHhcCCeEEEE-
Confidence 4689999999999999999999885 6799999642 122222233333322 334443
Q ss_pred ecCCChhhcCCCcEEEEecC
Q 001074 254 TSKLTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 254 ~~~l~~e~l~~fdvVI~~~~ 273 (1163)
. +.+.+.+.|+||.+..
T Consensus 67 -~--~~~a~~~aDvVii~~g 83 (318)
T 1y6j_A 67 -G--DYSDVKDCDVIVVTAG 83 (318)
T ss_dssp ----CGGGGTTCSEEEECCC
T ss_pred -C--CHHHhCCCCEEEEcCC
Confidence 2 3456889999999875
No 356
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=84.94 E-value=1.4 Score=47.35 Aligned_cols=35 Identities=17% Similarity=0.342 Sum_probs=29.5
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA------HIVLVARQ 40 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEcCC
Confidence 4567889998 68999999999999997 78887643
No 357
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=84.93 E-value=1.3 Score=50.35 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=28.7
Q ss_pred cCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 575 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 575 ~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.++|+|.|+ |.||..+++.|+..|. +++++|.+
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGH------YVIASDWK 62 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCC------eEEEEECC
Confidence 468999996 9999999999999986 78888764
No 358
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=84.93 E-value=1.5 Score=46.94 Aligned_cols=36 Identities=33% Similarity=0.465 Sum_probs=30.7
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~------~V~~~~r~ 42 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGA------KVVIVDRD 42 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEcCC
Confidence 46778899998 57899999999999997 78888754
No 359
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=84.92 E-value=0.92 Score=50.16 Aligned_cols=36 Identities=17% Similarity=0.345 Sum_probs=30.8
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~------~V~~~~r~ 74 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGA------NVAVAARS 74 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 46778888887 68999999999999997 88888765
No 360
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=84.90 E-value=1.7 Score=47.79 Aligned_cols=31 Identities=29% Similarity=0.408 Sum_probs=26.9
Q ss_pred eEEEEcCChHHHHHHHHHHHh-----CCCeEEEEeC
Q 001074 180 NILVSGMQGLGAEIAKNLILA-----GVKSVTLHDE 210 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvla-----GVg~itLvD~ 210 (1163)
+|+|+|+|.+|+.+|..|..+ |-..++++|.
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 799999999999999999999 7236888763
No 361
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=84.84 E-value=1.8 Score=47.12 Aligned_cols=35 Identities=11% Similarity=0.377 Sum_probs=29.8
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 55 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGL------RVFVCARG 55 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5677899987 78999999999999997 78888754
No 362
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.82 E-value=2 Score=46.12 Aligned_cols=34 Identities=29% Similarity=0.516 Sum_probs=29.6
Q ss_pred hhcCeEEEEcC-C-hHHHHHHHHHHHhCCCeEEEEeC
Q 001074 176 LFASNILVSGM-Q-GLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 176 L~~s~VlIiG~-g-glGsEiaKNLvlaGVg~itLvD~ 210 (1163)
|++++|+|.|. | |+|.++++.|+..|. ++.++|.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r 55 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDY 55 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecC
Confidence 66789999998 6 899999999999997 5777775
No 363
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=84.79 E-value=0.74 Score=51.04 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=30.3
Q ss_pred HHhcCcEEEEecCc-chHHHHHHHHHcccccCCCccEEEec
Q 001074 572 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 611 (1163)
Q Consensus 572 kL~~~kVlvVGaGg-lGce~lknLa~~Gv~~~~~g~i~ivD 611 (1163)
.+.+++|+|||.|. +|..+++.|+..|. ++++++
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~h 190 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAGC------TTTVTH 190 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTC------EEEEEC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCCC------eEEEEe
Confidence 46789999999997 69999999999986 889886
No 364
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=84.70 E-value=1.2 Score=48.07 Aligned_cols=35 Identities=20% Similarity=0.449 Sum_probs=29.2
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA------KVALVDWN 40 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC------EEEEEECC
Confidence 4567889998 68999999999999997 78887643
No 365
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=84.65 E-value=0.55 Score=53.24 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=30.3
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.||+|||+|..|+.+|-.|++.|+ +++|+|.+
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~------~v~v~Er~ 33 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI------KVTIYERN 33 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC------CEEEEecC
Confidence 4689999999999999999999999 89999865
No 366
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=84.65 E-value=1.5 Score=49.37 Aligned_cols=73 Identities=10% Similarity=0.133 Sum_probs=50.4
Q ss_pred hcCcEEEEecCcchHHHHHHHHHc-ccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeE
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~-Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I 652 (1163)
...+++|||+|++|..+++.|+.. ++ .+++|+|.+ ..|++.+++.+.... +.+
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~-----~~V~v~~r~-------------------~~~a~~la~~~~~~~--~~~ 177 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDI-----GEVKAYDVR-------------------EKAAKKFVSYCEDRG--ISA 177 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCC-----CEEEEECSS-------------------HHHHHHHHHHHHHTT--CCE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCc-----cEEEEECCC-------------------HHHHHHHHHHHHhcC--ceE
Confidence 467999999999999999999874 56 678887643 346777777665421 233
Q ss_pred EEEeccCCcccccccchhhhccCCEEEEccCc
Q 001074 653 EALQNRVGPETENVFDDTFWENITCVINALDN 684 (1163)
Q Consensus 653 ~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn 684 (1163)
. +. +. .+.. ++|+|++|+-+
T Consensus 178 ~-~~-----~~-----~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 178 S-VQ-----PA-----EEAS-RCDVLVTTTPS 197 (322)
T ss_dssp E-EC-----CH-----HHHT-SSSEEEECCCC
T ss_pred E-EC-----CH-----HHHh-CCCEEEEeeCC
Confidence 2 21 11 2345 79999999864
No 367
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=84.65 E-value=1.2 Score=49.93 Aligned_cols=37 Identities=19% Similarity=0.199 Sum_probs=31.8
Q ss_pred HHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 571 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 571 ~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
..+.+++|+|.| +|.||..+++.|+..|. +++++|.+
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA------TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC------eEEEEeCC
Confidence 457788999999 59999999999999986 78888754
No 368
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=84.59 E-value=2.3 Score=47.76 Aligned_cols=37 Identities=27% Similarity=0.513 Sum_probs=31.4
Q ss_pred HhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
....||.|||+|.+|..++..|+..|.. ..|.++|-|
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~----~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIV----DELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSC----SEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 4557999999999999999999998873 579999854
No 369
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=84.57 E-value=1.1 Score=51.85 Aligned_cols=35 Identities=34% Similarity=0.466 Sum_probs=31.2
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
.|.+++|.|||+|.||..+++.|...|+ +++.+|.
T Consensus 188 ~l~gktvGIIGlG~IG~~vA~~l~a~G~------~V~~~d~ 222 (393)
T 2nac_A 188 DLEAMHVGTVAAGRIGLAVLRRLAPFDV------HLHYTDR 222 (393)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTC------EEEEECS
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCC------EEEEEcC
Confidence 5788999999999999999999998887 7888774
No 370
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=84.55 E-value=4.3 Score=43.83 Aligned_cols=93 Identities=15% Similarity=0.171 Sum_probs=57.7
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCCC
Q 001074 180 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 258 (1163)
Q Consensus 180 ~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l~ 258 (1163)
+|+|.|+ |++|..+++.|...+-.+|++++.+.-....+ ..+. ++....+++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------------------~~~~--v~~~~~D~~ 54 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------------------WRGK--VSVRQLDYF 54 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------------------GBTT--BEEEECCTT
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------------------hhCC--CEEEEcCCC
Confidence 6999995 88999999999887334677766543211111 0122 334444553
Q ss_pred h-----hhcCCCcEEEEecCC-------hhHHHHHHHHHHhcCCCc-eeEEeeecc
Q 001074 259 K-----EQLSDFQAVVFTDIS-------LDKAIEFDDFCHNHQPAI-SFIKAEVRG 301 (1163)
Q Consensus 259 ~-----e~l~~fdvVI~~~~~-------~~~~~~ln~~cr~~~~~I-pfI~~~~~G 301 (1163)
+ +.+.++|+||.+... ......+-+.|++.+ + .||..++.|
T Consensus 55 d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~g--v~~iv~~Ss~~ 108 (289)
T 3e48_A 55 NQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSG--VAHIIFIGYYA 108 (289)
T ss_dssp CHHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTT--CCEEEEEEESC
T ss_pred CHHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcC--CCEEEEEcccC
Confidence 2 346788999877542 233456777888887 4 477766644
No 371
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=84.51 E-value=1.5 Score=50.73 Aligned_cols=112 Identities=14% Similarity=0.093 Sum_probs=65.6
Q ss_pred cCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCC-----
Q 001074 575 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINP----- 648 (1163)
Q Consensus 575 ~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np----- 648 (1163)
.++|+|.|+ |+||.++++.|+..|. ++++++...- .....+.+.+.+....+
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~R~~~----------------~~~~~~~l~~~l~~~~~~~~~~ 126 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYSH------RIYCFIRADN----------------EEIAWYKLMTNLNDYFSEETVE 126 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTEE------EEEEEEECSS----------------HHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCCC------EEEEEECCCC----------------hHHHHHHHHHHHHHhccccccc
Confidence 458999995 9999999999988876 7777653211 01112223333333221
Q ss_pred --CCeEEEEeccCCcccccccchhhhccCCEEEEccC--------------chHHHHHHHhhcccccccEEecCCCCccc
Q 001074 649 --RLNIEALQNRVGPETENVFDDTFWENITCVINALD--------------NVNARLYVDQRCLYFQKPLLESGTLGAKC 712 (1163)
Q Consensus 649 --~~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alD--------------n~~aR~~v~~~c~~~~~PlI~sgt~G~~G 712 (1163)
.-++..+...+... +. +. .+.++|+||++.- |+..-..+-+.|....+.+|..++.+. |
T Consensus 127 ~~~~~v~~v~~Dl~d~-~~-l~--~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G 201 (427)
T 4f6c_A 127 MMLSNIEVIVGDFECM-DD-VV--LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-G 201 (427)
T ss_dssp HHHTTEEEEEECC----CC-CC--CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-G
T ss_pred cccCceEEEeCCCCCc-cc-CC--CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-C
Confidence 12566666666541 11 22 4678999999864 333345566666666667777666655 4
Q ss_pred c
Q 001074 713 N 713 (1163)
Q Consensus 713 ~ 713 (1163)
.
T Consensus 202 ~ 202 (427)
T 4f6c_A 202 T 202 (427)
T ss_dssp S
T ss_pred C
Confidence 4
No 372
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=84.50 E-value=1.4 Score=52.64 Aligned_cols=118 Identities=13% Similarity=0.107 Sum_probs=65.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHh-cCCCEEEEeecC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTLTSK 256 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eL-Np~V~V~~~~~~ 256 (1163)
..+|.|||+|.+|..+|++|+..|. .|+++|.+.-....+...-. ...+-.-+....+.++.+ .+++-+...+..
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~g~---~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~ 79 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA---KGTKVVGAQSLKEMVSKLKKPRRIILLVKAG 79 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT---TTSSCEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhccc---CCCceeccCCHHHHHhhccCCCEEEEecCCh
Confidence 4689999999999999999999997 79999875433222211100 000000001111222222 344444444332
Q ss_pred -CCh-------hhcCCCcEEEEecC-ChhHHHHHHHHHHhcCCCceeEEeeecc
Q 001074 257 -LTK-------EQLSDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIKAEVRG 301 (1163)
Q Consensus 257 -l~~-------e~l~~fdvVI~~~~-~~~~~~~ln~~cr~~~~~IpfI~~~~~G 301 (1163)
..+ ..+..-++||++.. .+....++.+.+.+.+ +.|+.+.+.|
T Consensus 80 ~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~G--i~fvd~pVsG 131 (484)
T 4gwg_A 80 QAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKG--ILFVGSGVSG 131 (484)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEEEEEEEES
T ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhc--cccccCCccC
Confidence 111 13445577777654 4445556667777778 7787765544
No 373
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=84.48 E-value=0.76 Score=47.07 Aligned_cols=33 Identities=30% Similarity=0.337 Sum_probs=29.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
...|+|||+|..|..+|..|++.|+ +++|+|..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~ 34 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKS 34 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 3569999999999999999999999 79999964
No 374
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=84.42 E-value=1.3 Score=49.75 Aligned_cols=80 Identities=16% Similarity=0.177 Sum_probs=50.3
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC---CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGV---KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGV---g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
..+|.|||+|.+|..++.+|..+|+ ..++++|.+.- ..+++.+ .+. .+.+. .
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~-----------------~~~~~~l----~~~--G~~~~--~ 76 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD-----------------LATVSAL----RKM--GVKLT--P 76 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT-----------------SHHHHHH----HHH--TCEEE--S
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc-----------------HHHHHHH----HHc--CCEEe--C
Confidence 3579999999999999999999995 57888774310 0133322 222 23321 1
Q ss_pred cCCChhhcCCCcEEEEecCChhHHHHHHHH
Q 001074 255 SKLTKEQLSDFQAVVFTDISLDKAIEFDDF 284 (1163)
Q Consensus 255 ~~l~~e~l~~fdvVI~~~~~~~~~~~ln~~ 284 (1163)
+ ..+.+.++|+||+|..+......+.++
T Consensus 77 -~-~~e~~~~aDvVilav~~~~~~~vl~~l 104 (322)
T 2izz_A 77 -H-NKETVQHSDVLFLAVKPHIIPFILDEI 104 (322)
T ss_dssp -C-HHHHHHHCSEEEECSCGGGHHHHHHHH
T ss_pred -C-hHHHhccCCEEEEEeCHHHHHHHHHHH
Confidence 1 234566889999998754444444444
No 375
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=84.40 E-value=1.1 Score=47.96 Aligned_cols=34 Identities=12% Similarity=0.306 Sum_probs=28.0
Q ss_pred hcCcEEEEe-cCcchHHHHHHHHH-cccccCCCccEEEecCC
Q 001074 574 EDAKVFIVG-SGALGCEFLKNVAL-MGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 574 ~~~kVlvVG-aGglGce~lknLa~-~Gv~~~~~g~i~ivD~D 613 (1163)
++++|+|.| .|+||.++++.|+. .|. +++++|.+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~------~V~~~~r~ 38 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG------DVVLTARD 38 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS------EEEEEESS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC------eEEEEeCC
Confidence 356788887 79999999999999 897 78888754
No 376
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=84.40 E-value=0.83 Score=49.14 Aligned_cols=35 Identities=17% Similarity=0.298 Sum_probs=29.1
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 38 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGA------TVYITGRH 38 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5667788887 78999999999999997 78887643
No 377
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=84.37 E-value=0.84 Score=51.68 Aligned_cols=36 Identities=25% Similarity=0.404 Sum_probs=31.7
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|.+++|.|||.|.+|..+++.|...|+ +++.+|..
T Consensus 142 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~------~V~~~d~~ 177 (330)
T 4e5n_A 142 GLDNATVGFLGMGAIGLAMADRLQGWGA------TLQYHEAK 177 (330)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHTTTSCC------EEEEECSS
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHHCCC------EEEEECCC
Confidence 3678999999999999999999998887 78888764
No 378
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=84.33 E-value=1.9 Score=47.18 Aligned_cols=23 Identities=13% Similarity=0.419 Sum_probs=19.9
Q ss_pred CcEEEEec-CcchHHHHHHHHHcc
Q 001074 576 AKVFIVGS-GALGCEFLKNVALMG 598 (1163)
Q Consensus 576 ~kVlvVGa-GglGce~lknLa~~G 598 (1163)
++|+|.|+ |.||..+++.|+..|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g 25 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN 25 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS
T ss_pred CEEEEECCCchHHHHHHHHHHhCC
Confidence 47999995 999999999998876
No 379
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=84.33 E-value=1.3 Score=48.08 Aligned_cols=35 Identities=29% Similarity=0.341 Sum_probs=29.3
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 39 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGA------KVTITGRH 39 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5677888887 68999999999999997 78887643
No 380
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=84.30 E-value=3.9 Score=44.61 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=27.3
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 179 SNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 179 s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
.+|||.|+ |++|..+++.|+..|. +|+++|..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY-EVVVVDNL 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 37999997 8999999999999996 78877653
No 381
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=84.28 E-value=0.96 Score=50.64 Aligned_cols=35 Identities=9% Similarity=-0.008 Sum_probs=31.5
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHh-CCCeEEEEeC
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILA-GVKSVTLHDE 210 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvla-GVg~itLvD~ 210 (1163)
....+|.|||+|..|..++++|... |+.+++++|.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 4567999999999999999999988 9889999885
No 382
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=84.21 E-value=2.2 Score=50.62 Aligned_cols=93 Identities=14% Similarity=0.062 Sum_probs=55.2
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
.+..++|+|+|+|++|..++..|+..|--+|+++|.+. .|++.+++ . +.+.+ ..
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~-------------------~ka~~la~----~-~~~~~--~~ 73 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTL-------------------ANAQALAK----P-SGSKA--IS 73 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSH-------------------HHHHHHHG----G-GTCEE--EE
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCH-------------------HHHHHHHH----h-cCCcE--EE
Confidence 35567899999999999999999998433799987531 23333322 1 12322 12
Q ss_pred cCCC-----hhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEE
Q 001074 255 SKLT-----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 296 (1163)
Q Consensus 255 ~~l~-----~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~ 296 (1163)
.++. .+.+.++|+||.|.... ....+.+.|.+.+ ..++.
T Consensus 74 ~D~~d~~~l~~~l~~~DvVIn~tp~~-~~~~v~~a~l~~g--~~vvd 117 (467)
T 2axq_A 74 LDVTDDSALDKVLADNDVVISLIPYT-FHPNVVKSAIRTK--TDVVT 117 (467)
T ss_dssp CCTTCHHHHHHHHHTSSEEEECSCGG-GHHHHHHHHHHHT--CEEEE
T ss_pred EecCCHHHHHHHHcCCCEEEECCchh-hhHHHHHHHHhcC--CEEEE
Confidence 2221 13456889998886532 2234566677766 54443
No 383
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=84.14 E-value=4.8 Score=48.49 Aligned_cols=86 Identities=14% Similarity=0.145 Sum_probs=63.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCC-
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL- 257 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l- 257 (1163)
.+|+|+|+|-+|..+|+.|...|. .++++|.+.-....+. .+...+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~-------------------------------~~i~gD~t 396 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV-PFILIDRQESPVCNDH-------------------------------VVVYGDAT 396 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCCSSCCSS-------------------------------CEEESCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-CEEEEECChHHHhhcC-------------------------------CEEEeCCC
Confidence 789999999999999999999997 6899997654332221 1122221
Q ss_pred -----ChhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEE
Q 001074 258 -----TKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 296 (1163)
Q Consensus 258 -----~~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~ 296 (1163)
.+.-+.++|.||++..+.+....+...+++.++++..|.
T Consensus 397 ~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 397 VGQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSHIRIVA 440 (565)
T ss_dssp SSTHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CHHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCCCEEEE
Confidence 223467899999999887888888899999985444443
No 384
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=84.10 E-value=1.4 Score=50.91 Aligned_cols=35 Identities=26% Similarity=0.526 Sum_probs=31.9
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
.|.+++|.|||+|.||..+++.|...|+ +++.+|.
T Consensus 116 ~l~gktvGIIGlG~IG~~vA~~l~a~G~------~V~~~d~ 150 (381)
T 3oet_A 116 SLRDRTIGIVGVGNVGSRLQTRLEALGI------RTLLCDP 150 (381)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTC------EEEEECH
T ss_pred ccCCCEEEEEeECHHHHHHHHHHHHCCC------EEEEECC
Confidence 4788999999999999999999999998 8888875
No 385
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=84.09 E-value=3 Score=44.96 Aligned_cols=62 Identities=21% Similarity=0.255 Sum_probs=44.7
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEee
Q 001074 176 LFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (1163)
Q Consensus 176 L~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~ 254 (1163)
|+++.|+|.| .+|+|.++|+.|+..|. ++.++|.+ ..+.+.+.+.+.+..+...+....
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 65 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARD-------------------GERLRAAESALRQRFPGARLFASV 65 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHHhcCCceEEEEe
Confidence 5678899997 57999999999999998 58887742 235566667777666655455544
Q ss_pred cCC
Q 001074 255 SKL 257 (1163)
Q Consensus 255 ~~l 257 (1163)
.++
T Consensus 66 ~Dv 68 (265)
T 3lf2_A 66 CDV 68 (265)
T ss_dssp CCT
T ss_pred CCC
Confidence 443
No 386
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=84.07 E-value=1.1 Score=49.62 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=30.5
Q ss_pred HHhcCcEEEEecCc-chHHHHHHHHHcccccCCCccEEEec
Q 001074 572 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 611 (1163)
Q Consensus 572 kL~~~kVlvVGaGg-lGce~lknLa~~Gv~~~~~g~i~ivD 611 (1163)
.|.+++++|||+|+ +|..++..|...|. ++++++
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~h 192 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKA------TVTTCH 192 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC------EEEEEC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCC------eEEEEe
Confidence 47899999999998 79999999999997 788874
No 387
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=84.02 E-value=4 Score=46.23 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=28.5
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 178 ASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 178 ~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
..+|+|.|+ |++|..+++.|+..|. +|+++|..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGH-YVIASDWK 62 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECC
Confidence 368999997 8999999999999995 78888764
No 388
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=84.00 E-value=0.5 Score=53.07 Aligned_cols=36 Identities=19% Similarity=0.362 Sum_probs=31.7
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+.+++|.|||+|.+|..+++.|...|+ +++++|..
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~------~V~~~d~~ 176 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAFGM------RVVYHART 176 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHCCC------EEEEECCC
Confidence 4677899999999999999999999887 78888764
No 389
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=83.97 E-value=0.91 Score=50.04 Aligned_cols=37 Identities=22% Similarity=0.356 Sum_probs=32.6
Q ss_pred HHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 571 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 571 ~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+||+++.++|-| ++|||-++++.|+..|. ++.++|.+
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga------~V~i~~r~ 62 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGA------RVFITGRR 62 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 578998888888 67999999999999998 89998854
No 390
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=83.95 E-value=1.5 Score=46.73 Aligned_cols=62 Identities=15% Similarity=0.192 Sum_probs=41.1
Q ss_pred hcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeE
Q 001074 574 EDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (1163)
Q Consensus 574 ~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I 652 (1163)
.+++++|.| .||||.++++.|+..|. +++++|... ..+.+.+++.+....+ ++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~------~V~~~~~~~------------------~~~~~~~~~~~~~~~~--~~ 56 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGY------NVAVNYAGS------------------KEKAEAVVEEIKAKGV--DS 56 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESSC------------------HHHHHHHHHHHHHTTS--CE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCCC------------------HHHHHHHHHHHHhcCC--cE
Confidence 456777777 68999999999999997 777766431 1344555555655443 45
Q ss_pred EEEeccCCc
Q 001074 653 EALQNRVGP 661 (1163)
Q Consensus 653 ~~~~~~v~~ 661 (1163)
..+...+..
T Consensus 57 ~~~~~Dv~d 65 (246)
T 3osu_A 57 FAIQANVAD 65 (246)
T ss_dssp EEEECCTTC
T ss_pred EEEEccCCC
Confidence 555555543
No 391
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=83.95 E-value=2.3 Score=46.00 Aligned_cols=82 Identities=15% Similarity=0.188 Sum_probs=53.3
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEE-EecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLT-ITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~-ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
.||.|+|||.+|..+++.+...+ +.|+ ++|.+.-+ ...+
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~------~eLva~~d~~~~~------------------------------~~gv---- 43 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKG------HEIVGVIENTPKA------------------------------TTPY---- 43 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT------CEEEEEECSSCC--------------------------------CCS----
T ss_pred eEEEEECcCHHHHHHHHHHHhCC------CEEEEEEecCccc------------------------------cCCC----
Confidence 58999999999999999988765 2333 45543210 0111
Q ss_pred EeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecCCCCc
Q 001074 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGA 710 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sgt~G~ 710 (1163)
.+..+. +++. ++|+||++...-.+...+. ...++|+| .||.|+
T Consensus 44 ---~v~~dl-----~~l~-~~DVvIDft~p~a~~~~~~---l~~g~~vV-igTTG~ 86 (243)
T 3qy9_A 44 ---QQYQHI-----ADVK-GADVAIDFSNPNLLFPLLD---EDFHLPLV-VATTGE 86 (243)
T ss_dssp ---CBCSCT-----TTCT-TCSEEEECSCHHHHHHHHT---SCCCCCEE-ECCCSS
T ss_pred ---ceeCCH-----HHHh-CCCEEEEeCChHHHHHHHH---HhcCCceE-eCCCCC
Confidence 111111 2234 8999999986555555554 78999999 577776
No 392
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=83.95 E-value=3.9 Score=45.15 Aligned_cols=105 Identities=13% Similarity=0.235 Sum_probs=61.0
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 178 ASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 178 ~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
+.+|+|.| .|++|..+++.|+..|. +|+++|...-. .....+.+.+..+ ..+.....+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~-~~~~~~~~D 63 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNS-------------------KREAIARIEKITG-KTPAFHETD 63 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSS-------------------CTHHHHHHHHHHS-CCCEEECCC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcc-------------------hHHHHHHHHhhcC-CCceEEEee
Confidence 46899998 58999999999999996 67777643211 0111222332211 123444445
Q ss_pred CCh-----hhcC--CCcEEEEecCC-----------------hhHHHHHHHHHHhcCCCceeEEeeecceeE
Q 001074 257 LTK-----EQLS--DFQAVVFTDIS-----------------LDKAIEFDDFCHNHQPAISFIKAEVRGLFG 304 (1163)
Q Consensus 257 l~~-----e~l~--~fdvVI~~~~~-----------------~~~~~~ln~~cr~~~~~IpfI~~~~~G~~G 304 (1163)
+++ +.+. +.|+||-+... ......+-+.|++.+. -.||.+++.+.+|
T Consensus 64 l~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~iv~~SS~~~~g 134 (341)
T 3enk_A 64 VSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV-KRIVFSSSATVYG 134 (341)
T ss_dssp TTCHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CEEEEEEEGGGBC
T ss_pred cCCHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCC-CEEEEEecceEec
Confidence 532 2333 67888865421 1122345567777762 2678777776665
No 393
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.92 E-value=1.3 Score=50.59 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=32.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
+...+|+|+|+|++|..++..+...|. +++++|.+
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~ 199 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDIN 199 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 677999999999999999999999999 89999853
No 394
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=83.87 E-value=1.8 Score=48.11 Aligned_cols=108 Identities=15% Similarity=0.107 Sum_probs=0.0
Q ss_pred HHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCC
Q 001074 571 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR 649 (1163)
Q Consensus 571 ~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~ 649 (1163)
..+..++|+|.| .|+||..+++.|+..|. +++++|.+.-.....-+..
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~~~~~l~~~------------------------- 65 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGD------KVVGIDNFATGRREHLKDH------------------------- 65 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECCSSCCGGGSCCC-------------------------
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCC------EEEEEECCCccchhhHhhc-------------------------
Q ss_pred CeEEEEeccCCcccccccchhhhcc--CCEEEEccC--------------chHHHHHHHhhcccccc-cEEecCCCCccc
Q 001074 650 LNIEALQNRVGPETENVFDDTFWEN--ITCVINALD--------------NVNARLYVDQRCLYFQK-PLLESGTLGAKC 712 (1163)
Q Consensus 650 ~~I~~~~~~v~~~~e~~~~~~f~~~--~DvVi~alD--------------n~~aR~~v~~~c~~~~~-PlI~sgt~G~~G 712 (1163)
-+++.+...+.....- .+.+++ +|+||++.. |+.+-..+-+.|...++ .+|..++.+..|
T Consensus 66 ~~~~~~~~Dl~d~~~~---~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g 142 (333)
T 2q1w_A 66 PNLTFVEGSIADHALV---NQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYG 142 (333)
T ss_dssp TTEEEEECCTTCHHHH---HHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGC
T ss_pred CCceEEEEeCCCHHHH---HHHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
No 395
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=83.85 E-value=2.4 Score=43.92 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=27.3
Q ss_pred eEEEEc-CChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 180 NILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 180 ~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
+|+|+| +|.+|..+++.|...|. +++++|.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r 32 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSR 32 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 799999 99999999999999996 7888875
No 396
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=83.84 E-value=2.4 Score=45.46 Aligned_cols=86 Identities=16% Similarity=0.258 Sum_probs=53.6
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~~ 655 (1163)
.+|.|||+|.+|..+++.|+..|. .++++|.+. .|++.+++.. . +.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~------~v~~~~~~~-------------------~~~~~~~~~~---g--~~---- 49 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPH------ELIISGSSL-------------------ERSKEIAEQL---A--LP---- 49 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSC------EEEEECSSH-------------------HHHHHHHHHH---T--CC----
T ss_pred cEEEEECCCHHHHHHHHHHHhCCC------eEEEECCCH-------------------HHHHHHHHHc---C--CE----
Confidence 489999999999999999998875 677776432 1333333221 1 11
Q ss_pred eccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEec
Q 001074 656 QNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLES 705 (1163)
Q Consensus 656 ~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~s 705 (1163)
+..+. .+.+++.|+|+.|+-....+..+... ..++.+++.
T Consensus 50 ---~~~~~-----~~~~~~~D~Vi~~v~~~~~~~v~~~l--~~~~~vv~~ 89 (259)
T 2ahr_A 50 ---YAMSH-----QDLIDQVDLVILGIKPQLFETVLKPL--HFKQPIISM 89 (259)
T ss_dssp ---BCSSH-----HHHHHTCSEEEECSCGGGHHHHHTTS--CCCSCEEEC
T ss_pred ---eeCCH-----HHHHhcCCEEEEEeCcHhHHHHHHHh--ccCCEEEEe
Confidence 11111 24467899999999855555555442 245566654
No 397
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=83.80 E-value=1.3 Score=48.25 Aligned_cols=37 Identities=14% Similarity=0.211 Sum_probs=28.5
Q ss_pred HHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 571 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 571 ~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
..+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 61 (272)
T 4dyv_A 24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGY------GVALAGRR 61 (272)
T ss_dssp ----CCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 356777888887 68999999999999998 78888754
No 398
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=83.79 E-value=0.73 Score=49.81 Aligned_cols=98 Identities=10% Similarity=0.103 Sum_probs=59.4
Q ss_pred CcEEEEec-CcchHHHHHHHHHc--ccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeE
Q 001074 576 AKVFIVGS-GALGCEFLKNVALM--GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (1163)
Q Consensus 576 ~kVlvVGa-GglGce~lknLa~~--Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I 652 (1163)
++|+|.|+ |.||..+++.|+.. |. +++++|.+.- +... +.. +. +
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~------~V~~~~r~~~-------------------~~~~----l~~--~~--~ 47 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPAS------QIIAIVRNVE-------------------KAST----LAD--QG--V 47 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGG------GEEEEESCTT-------------------TTHH----HHH--TT--C
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCC------eEEEEEcCHH-------------------HHhH----Hhh--cC--C
Confidence 47999996 99999999999998 76 7888764320 1111 111 22 3
Q ss_pred EEEeccCCcccccccchhhhccCCEEEEccC-------chHHHHHHHhhcccccc-cEEecCCCC
Q 001074 653 EALQNRVGPETENVFDDTFWENITCVINALD-------NVNARLYVDQRCLYFQK-PLLESGTLG 709 (1163)
Q Consensus 653 ~~~~~~v~~~~e~~~~~~f~~~~DvVi~alD-------n~~aR~~v~~~c~~~~~-PlI~sgt~G 709 (1163)
+.+...+... +.+ .+.++++|+||++.. |+..-..+-+.|...++ .+|..++.+
T Consensus 48 ~~~~~D~~d~-~~l--~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~ 109 (287)
T 2jl1_A 48 EVRHGDYNQP-ESL--QKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF 109 (287)
T ss_dssp EEEECCTTCH-HHH--HHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred eEEEeccCCH-HHH--HHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 3444444431 111 345678999998764 55555566677777664 466555443
No 399
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=83.76 E-value=1.5 Score=46.83 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=30.1
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+++++|+|.| .|+||.++++.|+..|. +++++|.+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~------~V~~~~r~ 45 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGA------SAVLLDLP 45 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5678899998 78999999999999997 78888754
No 400
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=83.72 E-value=0.66 Score=49.88 Aligned_cols=38 Identities=24% Similarity=0.434 Sum_probs=30.7
Q ss_pred HHHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 570 QKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 570 q~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
..++...+|.|||+|.+|..++++|+..|. +++++|.+
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~------~V~~~~r~ 51 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGH------EVTIGTRD 51 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 357889999999999999999999999997 78888765
No 401
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=83.66 E-value=1.5 Score=48.11 Aligned_cols=37 Identities=16% Similarity=0.242 Sum_probs=28.1
Q ss_pred HHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 571 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 571 ~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
..+++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 66 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGY------SVVITGRR 66 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 457888899998 68999999999999997 78888753
No 402
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=83.63 E-value=2.7 Score=49.86 Aligned_cols=32 Identities=28% Similarity=0.402 Sum_probs=28.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
..+|.|||+|.+|..+|.+|+..|. .|+++|.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY-TVAIYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcC
Confidence 4689999999999999999999997 5888774
No 403
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=83.61 E-value=0.58 Score=54.11 Aligned_cols=39 Identities=23% Similarity=0.446 Sum_probs=36.0
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcc
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVI 615 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~I 615 (1163)
+|...||+|+|+|+.|+.+++.|..+|+ .+|+++|.+-+
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga-----~~I~v~D~~Gl 223 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGA-----TKVTVVDKFGI 223 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEETTEE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCC-----CeEEEEECCCc
Confidence 6778899999999999999999999999 89999998753
No 404
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=83.61 E-value=1.9 Score=48.61 Aligned_cols=44 Identities=18% Similarity=0.221 Sum_probs=36.9
Q ss_pred cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 168 YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 168 ~G~e~q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
|.......|.+++|.|||+|.+|..+|+.|...|. +|+.+|...
T Consensus 130 W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 173 (324)
T 3hg7_A 130 WQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSRSG 173 (324)
T ss_dssp CCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CcCCCCcccccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcCCh
Confidence 54333457899999999999999999999999998 788888755
No 405
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=83.61 E-value=0.91 Score=50.86 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=31.5
Q ss_pred HHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 174 RRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 174 ~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
.+....+|.|||+|.+|..+|++|+..|. .++++|.+.
T Consensus 27 ~~~~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 64 (320)
T 4dll_A 27 SDPYARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTP 64 (320)
T ss_dssp --CCCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCH
T ss_pred cccCCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCH
Confidence 34456799999999999999999999997 789988653
No 406
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=83.58 E-value=4.3 Score=45.53 Aligned_cols=88 Identities=17% Similarity=0.143 Sum_probs=56.7
Q ss_pred CeEEEEcCChHHHH-HHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 001074 179 SNILVSGMQGLGAE-IAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (1163)
Q Consensus 179 s~VlIiG~gglGsE-iaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l 257 (1163)
++|.++|+||.|.. +|+.|...|. .+++.|...-. + ..+.|++. .+.+.. + .
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~-~V~~~D~~~~~-----------------~----~~~~L~~~--gi~v~~--g-~ 57 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGF-EVSGCDAKMYP-----------------P----MSTQLEAL--GIDVYE--G-F 57 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTC-EEEEEESSCCT-----------------T----HHHHHHHT--TCEEEE--S-C
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCC-EEEEEcCCCCc-----------------H----HHHHHHhC--CCEEEC--C-C
Confidence 68999999999996 9999999997 78998864310 0 23456554 455542 2 2
Q ss_pred Chhhc--CCCcEEEEecCChhHHHHHHHHHHhcCCCceeEE
Q 001074 258 TKEQL--SDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 296 (1163)
Q Consensus 258 ~~e~l--~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~ 296 (1163)
+++.+ .++|+||.+..=....-. -..+++.+ +|++.
T Consensus 58 ~~~~l~~~~~d~vV~Spgi~~~~p~-~~~a~~~g--i~v~~ 95 (326)
T 3eag_A 58 DAAQLDEFKADVYVIGNVAKRGMDV-VEAILNLG--LPYIS 95 (326)
T ss_dssp CGGGGGSCCCSEEEECTTCCTTCHH-HHHHHHTT--CCEEE
T ss_pred CHHHcCCCCCCEEEECCCcCCCCHH-HHHHHHcC--CcEEe
Confidence 33444 479999987542111112 23467888 88774
No 407
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=83.50 E-value=1.8 Score=47.18 Aligned_cols=36 Identities=17% Similarity=0.282 Sum_probs=30.6
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+++++++|.| +||||.++++.|+..|. +++++|.+
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~------~V~~~~r~ 60 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGA------YVVVADVN 60 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 36778899988 68999999999999997 78888754
No 408
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=83.48 E-value=1.8 Score=47.22 Aligned_cols=36 Identities=22% Similarity=0.420 Sum_probs=27.7
Q ss_pred HHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 571 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 571 ~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
..+. ++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~------~V~~~~r~ 54 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGW------SLVLTGRR 54 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 3455 6788887 68999999999999997 78887643
No 409
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=83.45 E-value=3.7 Score=44.75 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=28.6
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeC
Q 001074 177 FASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDE 210 (1163)
Q Consensus 177 ~~s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~ 210 (1163)
...+|.|||+|.+|..+++.|...|. ..++++|.
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 39 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNR 39 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcC
Confidence 34689999999999999999999964 36888774
No 410
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=83.43 E-value=0.83 Score=48.85 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=30.1
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+++++|+|.| .|+||.++++.|+..|. +++++|.+
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~------~V~~~~r~ 40 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGA------TVAACDLD 40 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5678899997 68999999999999997 78888754
No 411
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=83.41 E-value=2.3 Score=47.75 Aligned_cols=73 Identities=16% Similarity=0.015 Sum_probs=53.7
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHh-CCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 001074 177 FASNILVSGMQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (1163)
Q Consensus 177 ~~s~VlIiG~gglGsEiaKNLvla-GVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~ 255 (1163)
...+|+|||+|+.|...++.|... ++.+++++|.+ ..|++..++++.+.. +.+. . .
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-------------------~~~a~~la~~~~~~~--~~~~-~-~ 180 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVR-------------------EKAAKKFVSYCEDRG--ISAS-V-Q 180 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHHHTT--CCEE-E-C
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCC-------------------HHHHHHHHHHHHhcC--ceEE-E-C
Confidence 467999999999999999999874 68999998852 347777777776532 3343 2 2
Q ss_pred CCChhhcCCCcEEEEecCC
Q 001074 256 KLTKEQLSDFQAVVFTDIS 274 (1163)
Q Consensus 256 ~l~~e~l~~fdvVI~~~~~ 274 (1163)
++ ++.+ ++|+||.|+.+
T Consensus 181 ~~-~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 181 PA-EEAS-RCDVLVTTTPS 197 (322)
T ss_dssp CH-HHHT-SSSEEEECCCC
T ss_pred CH-HHHh-CCCEEEEeeCC
Confidence 22 3456 89999999864
No 412
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=83.37 E-value=1.4 Score=47.45 Aligned_cols=36 Identities=14% Similarity=0.387 Sum_probs=31.3
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~------~V~~~~r~ 41 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGA------EVLLTGRN 41 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 46788899998 68999999999999997 88888764
No 413
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=83.36 E-value=1.8 Score=47.49 Aligned_cols=33 Identities=33% Similarity=0.500 Sum_probs=29.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
.+|.|||+|.+|..++++|+..|. .++++|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 589999999999999999999995 799998754
No 414
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=83.36 E-value=3.4 Score=43.95 Aligned_cols=35 Identities=20% Similarity=0.488 Sum_probs=30.3
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 176 LFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 176 L~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
|++++|+|.| .||+|.++++.|+..|...+.++|.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence 5678899997 6799999999999999877888774
No 415
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=83.36 E-value=1.8 Score=47.05 Aligned_cols=35 Identities=23% Similarity=0.379 Sum_probs=29.2
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
.+++++++|.| +||||.++++.|+..|. +++++|.
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~------~V~~~~~ 60 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGA------KVAVNYA 60 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 46778888887 68999999999999997 7777654
No 416
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=83.34 E-value=0.85 Score=50.20 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=30.7
Q ss_pred hcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 574 ~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
.+++|+|+|+||.|..++..|+..|+ .+|+|++.
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~-----~~i~v~nR 151 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGF-----EKLKIYAR 151 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTC-----CCEEEECS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEeC
Confidence 45799999999999999999999999 89999853
No 417
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=83.33 E-value=2.1 Score=45.37 Aligned_cols=34 Identities=12% Similarity=0.276 Sum_probs=28.2
Q ss_pred hcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 574 EDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 574 ~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
..++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~------~V~~~~r~ 36 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGH------QVSMMGRR 36 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 356788888 68999999999999997 78888754
No 418
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=83.33 E-value=2.8 Score=46.77 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=29.4
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.||.|||+|.+|..++..|+..|. ..++++|-|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~-----~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKEL-----GDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-----CeEEEEeCC
Confidence 589999999999999999999996 359999865
No 419
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=83.32 E-value=1.7 Score=46.57 Aligned_cols=35 Identities=17% Similarity=0.395 Sum_probs=29.4
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++|+|.| .|+||.++++.|+..|. +++++|.+
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~------~V~~~~r~ 47 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA------VIHTCARN 47 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5667888887 68999999999999997 78887643
No 420
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=83.30 E-value=1.8 Score=46.79 Aligned_cols=95 Identities=11% Similarity=0.041 Sum_probs=57.2
Q ss_pred cEEEEec-CcchHHHHHHHHHc-ccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 577 KVFIVGS-GALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 577 kVlvVGa-GglGce~lknLa~~-Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
+|+|.|+ |.||..+++.|+.. |. ++++++.+.-....+ ..+ .++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~------~V~~~~R~~~~~~~~-------------------------~~~--~v~~ 48 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHID------HFHIGVRNVEKVPDD-------------------------WRG--KVSV 48 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCT------TEEEEESSGGGSCGG-------------------------GBT--TBEE
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCC------cEEEEECCHHHHHHh-------------------------hhC--CCEE
Confidence 7999995 99999999999987 65 788776543211111 012 2444
Q ss_pred EeccCCcccccccchhhhccCCEEEEccCc-------hHHHHHHHhhcccccc-cEEecCC
Q 001074 655 LQNRVGPETENVFDDTFWENITCVINALDN-------VNARLYVDQRCLYFQK-PLLESGT 707 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~~~~DvVi~alDn-------~~aR~~v~~~c~~~~~-PlI~sgt 707 (1163)
+...+.+. +.+ ...++++|+||++... +..-..+-+.|...++ .+|..++
T Consensus 49 ~~~D~~d~-~~l--~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 49 RQLDYFNQ-ESM--VEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp EECCTTCH-HHH--HHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEcCCCCH-HHH--HHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 55555431 111 3456789999988653 2333455566766664 3555444
No 421
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=83.26 E-value=1.4 Score=48.58 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=30.5
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~------~V~~~~r~ 67 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGA------TIVFNDIN 67 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 36788899998 78999999999999997 78887643
No 422
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=83.25 E-value=1.1 Score=49.05 Aligned_cols=37 Identities=22% Similarity=0.368 Sum_probs=31.8
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
.+.+++++|.| .||||.++++.|+..|. +++++|.+.
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~------~V~~~~r~~ 50 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGA------TVIMAVRDT 50 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTC------EEEEEESCH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEECCH
Confidence 46778899998 68999999999999997 888888653
No 423
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=83.24 E-value=1.5 Score=53.04 Aligned_cols=87 Identities=13% Similarity=0.235 Sum_probs=64.7
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~~ 655 (1163)
.+|+|+|+|-+|..+++.|...|. .++++|.|.-....+. ..+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~------~v~vid~d~~~~~~~~-------------------------------~~i 391 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV------PFILIDRQESPVCNDH-------------------------------VVV 391 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC------CEEEEESSCCSSCCSS-------------------------------CEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC------CEEEEECChHHHhhcC-------------------------------CEE
Confidence 899999999999999999999998 8999998864322211 123
Q ss_pred eccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhccccccc
Q 001074 656 QNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKP 701 (1163)
Q Consensus 656 ~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~P 701 (1163)
....+. +..+...-.+++|.+|.++++.++-..+...+++.+.+
T Consensus 392 ~gD~t~--~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~ 435 (565)
T 4gx0_A 392 YGDATV--GQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSH 435 (565)
T ss_dssp ESCSSS--STHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred EeCCCC--HHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCC
Confidence 333222 22344455789999999999998888888888877643
No 424
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=83.23 E-value=1.5 Score=46.25 Aligned_cols=35 Identities=20% Similarity=0.380 Sum_probs=29.2
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+++++++|.| .|+||.++++.|+..|. +++++|.+
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~------~V~~~~r~ 40 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS------TVIITGTS 40 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 4567888887 78999999999999997 78887643
No 425
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=83.22 E-value=1.2 Score=47.76 Aligned_cols=34 Identities=12% Similarity=0.226 Sum_probs=29.1
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
+++++|+|.| .|+||.++++.|+..|. +++++|.
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~------~v~~~~r 53 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGA------SVVVNYG 53 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEcC
Confidence 5678899998 68999999999999997 7777764
No 426
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=83.22 E-value=3 Score=47.09 Aligned_cols=74 Identities=20% Similarity=0.259 Sum_probs=49.6
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhh---CCCCe
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSI---NPRLN 651 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~---np~~~ 651 (1163)
..||.|||+|.+|..++-.|+..|.. ..|+++|-| ..|++..+..+... ..+++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~----~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~ 65 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIA----QEIGIVDIF-------------------KDKTKGDAIDLSNALPFTSPKK 65 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCC----CEEEEEeCC-------------------chHhHHHHHHHHHHHHhcCCeE
Confidence 36899999999999999999998873 578988742 22444433434332 24455
Q ss_pred EEEEeccCCcccccccchhhhccCCEEEEccC
Q 001074 652 IEALQNRVGPETENVFDDTFWENITCVINALD 683 (1163)
Q Consensus 652 I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alD 683 (1163)
+.+ +. .+-+++.|+||.+..
T Consensus 66 i~~-----~~-------~~a~~~aDvVii~ag 85 (326)
T 2zqz_A 66 IYS-----AE-------YSDAKDADLVVITAG 85 (326)
T ss_dssp EEE-----CC-------GGGGGGCSEEEECCC
T ss_pred EEE-----CC-------HHHhCCCCEEEEcCC
Confidence 553 11 123689999998863
No 427
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=83.19 E-value=3.8 Score=44.57 Aligned_cols=98 Identities=14% Similarity=0.153 Sum_probs=56.1
Q ss_pred cCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccc-hHHHHHHHHHHhhCCCCeE
Q 001074 575 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQ-AKSTVAASAATSINPRLNI 652 (1163)
Q Consensus 575 ~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~-~Ka~vaa~~l~~~np~~~I 652 (1163)
.++|+|.|+ |.+|..+++.|+..|. ++++++.+.-. .. .. .|++.+. .+. .+. +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~~-----------~~--~~~~~~~~~~-~l~--~~~--v 57 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN------PTYALVRKTIT-----------AA--NPETKEELID-NYQ--SLG--V 57 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC------CEEEEECCSCC-----------SS--CHHHHHHHHH-HHH--HTT--C
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC------cEEEEECCCcc-----------cC--ChHHHHHHHH-HHH--hCC--C
Confidence 468999996 9999999999999996 67776543210 00 00 2333221 222 133 3
Q ss_pred EEEeccCCcccccccchhhhccCCEEEEccCc--hHHHHHHHhhccccc
Q 001074 653 EALQNRVGPETENVFDDTFWENITCVINALDN--VNARLYVDQRCLYFQ 699 (1163)
Q Consensus 653 ~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn--~~aR~~v~~~c~~~~ 699 (1163)
+.+...+... +.+ ...++++|+||++... +..-..+-+.|...+
T Consensus 58 ~~v~~D~~d~-~~l--~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g 103 (307)
T 2gas_A 58 ILLEGDINDH-ETL--VKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAG 103 (307)
T ss_dssp EEEECCTTCH-HHH--HHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHC
T ss_pred EEEEeCCCCH-HHH--HHHHhCCCEEEECCcccccccHHHHHHHHHhcC
Confidence 4455555432 222 3456789999998763 233334444555544
No 428
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=83.19 E-value=2.5 Score=46.56 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=30.5
Q ss_pred HHhcCcEEEEecC-c--chHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSG-A--LGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaG-g--lGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|++++++|.|++ + ||.++++.|+..|. +++++|.+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~------~V~~~~r~ 66 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGA------ELAFTYQG 66 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTC------EEEEEECS
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCC------EEEEEcCC
Confidence 4788899999973 4 99999999999997 78888754
No 429
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=83.18 E-value=4.1 Score=43.77 Aligned_cols=63 Identities=24% Similarity=0.289 Sum_probs=42.5
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEe
Q 001074 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 253 (1163)
Q Consensus 175 kL~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~ 253 (1163)
+|.+++|+|.| .||+|.++++.|+..|. ++.++|.+. .+.+.+.+.+.+..+...+...
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 69 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSS-------------------EGLEASKAAVLETAPDAEVLTT 69 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHHCTTCCEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEE
Confidence 36678899997 67999999999999997 677776421 2444555566665444444444
Q ss_pred ecCC
Q 001074 254 TSKL 257 (1163)
Q Consensus 254 ~~~l 257 (1163)
..++
T Consensus 70 ~~D~ 73 (267)
T 1iy8_A 70 VADV 73 (267)
T ss_dssp ECCT
T ss_pred EccC
Confidence 4443
No 430
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=83.16 E-value=0.79 Score=51.10 Aligned_cols=32 Identities=25% Similarity=0.313 Sum_probs=28.1
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.||+|||+|++|+.++..|+..|. .++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~------~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE------DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC------CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC------eEEEEEcC
Confidence 589999999999999999999996 78888754
No 431
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=83.15 E-value=0.74 Score=50.54 Aligned_cols=36 Identities=11% Similarity=0.348 Sum_probs=31.7
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+.+++|+|||+|++|..+++.|+..|+ +++++|.+
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~------~V~v~~r~ 161 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGA------KVFLWNRT 161 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTC------EEEEECSS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCC------EEEEEECC
Confidence 4678999999999999999999999997 78888644
No 432
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=83.14 E-value=2.2 Score=45.73 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=29.2
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
..+|.|||+|.+|+.+++.|+..|+. +...++++|.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~--~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANII--KKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSS--CGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCC--CCCeEEEEeCC
Confidence 35899999999999999999999830 00278888754
No 433
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=83.13 E-value=3.9 Score=44.35 Aligned_cols=35 Identities=31% Similarity=0.499 Sum_probs=30.2
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 175 kL~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
.|.+++|+|.| .||+|.++|+.|+..|. ++.++|.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 43 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGR 43 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999997 67999999999999998 6888774
No 434
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=83.05 E-value=1.3 Score=47.57 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=28.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCC---CeEEEEeC
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGV---KSVTLHDE 210 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGV---g~itLvD~ 210 (1163)
.+|.|||+|.+|..++++|...|. ..++++|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeC
Confidence 589999999999999999999996 47888775
No 435
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=83.03 E-value=1.5 Score=47.45 Aligned_cols=35 Identities=14% Similarity=0.406 Sum_probs=29.5
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
+|++++++|.| .||||.++++.|+..|. +++++|.
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~------~V~~~~~ 50 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGA------KVVVNYA 50 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEcC
Confidence 46788889988 67999999999999997 7777654
No 436
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=82.96 E-value=0.39 Score=56.25 Aligned_cols=82 Identities=18% Similarity=0.336 Sum_probs=0.0
Q ss_pred HHHHhhcCCcccceeeeeeeccCCCCCCCCCCCCCCCccCchhh--hhhhcCHHHH------------------HHHhcC
Q 001074 517 EVVKACSGKFHPLYQFFYFDSVESLPTEPLDSTEFKPINSRYDA--QISVFGAKLQ------------------KKLEDA 576 (1163)
Q Consensus 517 EVIKaiTgkf~PI~q~~~fD~ie~Lp~~~~~~~~~~~~~~Rydr--q~~l~G~~~q------------------~kL~~~ 576 (1163)
|.+|++.-.|-.|+= +.+...++-...+||.. .+.+|-.+-| ++|.+.
T Consensus 153 e~v~~~~P~fG~Inl------------EDf~ap~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~ 220 (487)
T 3nv9_A 153 EFVQRIQHTFGAINL------------EDISQPNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHEC 220 (487)
T ss_dssp HHHHHHGGGCSEEEE------------CSCCTTHHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHhCCCCCeecH------------hhcCCchHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhc
Q ss_pred cEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 577 KVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 577 kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
||++.|||+-|+.+++.|...|+ +..+|+++|..
T Consensus 221 riV~~GAGaAGigia~ll~~~G~---~~~~i~l~D~~ 254 (487)
T 3nv9_A 221 RMVFIGAGSSNTTCLRLIVTAGA---DPKKIVMFDSK 254 (487)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTC---CGGGEEEEETT
T ss_pred EEEEECCCHHHHHHHHHHHHcCC---CcccEEEEecc
No 437
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=82.95 E-value=1.6 Score=46.41 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=28.0
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
|++++++|.| .||||.++++.|+..|. +++++|.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~------~V~~~~r 36 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGA------NVVVNYA 36 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 4567788887 78999999999999997 7777753
No 438
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=82.93 E-value=1.9 Score=47.77 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=29.0
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccc-cCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVS-CGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~-~~~~g~i~ivD~D 613 (1163)
+.+++|+|.| +|+||..+++.|+..|.. ..+.-+++++|.+
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 4456899999 699999999999999810 0000277777754
No 439
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=82.92 E-value=2.3 Score=46.12 Aligned_cols=35 Identities=17% Similarity=0.443 Sum_probs=29.9
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 54 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA------RVYTCSRN 54 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5678899998 68999999999999997 78887654
No 440
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.83 E-value=1.6 Score=47.51 Aligned_cols=35 Identities=29% Similarity=0.366 Sum_probs=29.4
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 39 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGA------NVTITGRS 39 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5677888887 78999999999999997 78888753
No 441
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=82.82 E-value=1.9 Score=46.48 Aligned_cols=30 Identities=23% Similarity=0.381 Sum_probs=23.9
Q ss_pred HHHHhcCcEEEEe-cCcchHHHHHHHHHccc
Q 001074 570 QKKLEDAKVFIVG-SGALGCEFLKNVALMGV 599 (1163)
Q Consensus 570 q~kL~~~kVlvVG-aGglGce~lknLa~~Gv 599 (1163)
+..+.+++|+|.| .||||.++++.|+..|.
T Consensus 21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~ 51 (267)
T 4iiu_A 21 QSNAMSRSVLVTGASKGIGRAIARQLAADGF 51 (267)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHHTTC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCC
Confidence 4567788899998 68999999999999998
No 442
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=82.80 E-value=1.6 Score=47.65 Aligned_cols=35 Identities=20% Similarity=0.338 Sum_probs=30.0
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~------~V~~~~r~ 62 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGA------RVFICARD 62 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5678899998 68999999999999997 78888754
No 443
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=82.79 E-value=2.2 Score=46.20 Aligned_cols=36 Identities=19% Similarity=0.392 Sum_probs=30.3
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 54 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGC------SVVVASRN 54 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 45677899998 78999999999999997 78887654
No 444
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=82.74 E-value=1.1 Score=49.20 Aligned_cols=95 Identities=13% Similarity=0.049 Sum_probs=0.0
Q ss_pred hcCcEEEEec-CcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeE
Q 001074 574 EDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (1163)
Q Consensus 574 ~~~kVlvVGa-GglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I 652 (1163)
++++|+|.|+ |.||..+++.|+..|. +++++|.+.-. +.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~-------------------------------~~--- 40 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNW------HAVGCGFRRAR-------------------------------PK--- 40 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTC------EEEEEC-----------------------------------------
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCC------eEEEEccCCCC-------------------------------CC---
Q ss_pred EEEeccCCcccccccchhhhcc--CCEEEEccC-----------------chHHHHHHHhhcccccccEEecCCCCccc
Q 001074 653 EALQNRVGPETENVFDDTFWEN--ITCVINALD-----------------NVNARLYVDQRCLYFQKPLLESGTLGAKC 712 (1163)
Q Consensus 653 ~~~~~~v~~~~e~~~~~~f~~~--~DvVi~alD-----------------n~~aR~~v~~~c~~~~~PlI~sgt~G~~G 712 (1163)
.+...+.....- .+.+++ +|+||++.- |+..-..+-+.|...+..+|..++.+..|
T Consensus 41 -~~~~Dl~d~~~~---~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~ 115 (315)
T 2ydy_A 41 -FEQVNLLDSNAV---HHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFD 115 (315)
T ss_dssp ------------C---HHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSC
T ss_pred -eEEecCCCHHHH---HHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcC
No 445
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=82.72 E-value=2.5 Score=47.34 Aligned_cols=72 Identities=28% Similarity=0.281 Sum_probs=49.3
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhC---CCCeE
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSIN---PRLNI 652 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~n---p~~~I 652 (1163)
.||.|||+|.+|..++-.|+..|.. +.|+++|-| ..|++..+..+.... .++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~----~el~L~Di~-------------------~~k~~g~a~dl~~~~~~~~~~~v 57 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVA----REVVLVDLD-------------------RKLAQAHAEDILHATPFAHPVWV 57 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSS-------------------HHHHHHHHHHHHTTGGGSCCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC-------------------hhHHHHHHHHHHHhHhhcCCeEE
Confidence 4899999999999999999998873 689999754 234444344444332 34555
Q ss_pred EEEeccCCcccccccchhhhccCCEEEEcc
Q 001074 653 EALQNRVGPETENVFDDTFWENITCVINAL 682 (1163)
Q Consensus 653 ~~~~~~v~~~~e~~~~~~f~~~~DvVi~al 682 (1163)
++ ++ .+-+++.|+||.+.
T Consensus 58 ~~-----~~-------~~a~~~aD~Vii~a 75 (310)
T 2xxj_A 58 WA-----GS-------YGDLEGARAVVLAA 75 (310)
T ss_dssp EE-----CC-------GGGGTTEEEEEECC
T ss_pred EE-----CC-------HHHhCCCCEEEECC
Confidence 54 11 12267899999885
No 446
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=82.72 E-value=3.2 Score=47.41 Aligned_cols=33 Identities=24% Similarity=0.246 Sum_probs=29.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d 211 (1163)
..+|.|+|+|.+|+.+|..|+..|. .++++|.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 4589999999999999999999995 68888864
No 447
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=82.72 E-value=1.2 Score=50.41 Aligned_cols=33 Identities=12% Similarity=0.207 Sum_probs=27.8
Q ss_pred CcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 576 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 576 ~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.||+|.| .|.||..+++.|+..|. -+++.+|.+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~-----~~v~~~d~~ 34 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD-----HHIFEVHRQ 34 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-----CEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEECCC
Confidence 3799999 69999999999999986 477777664
No 448
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=82.72 E-value=3.8 Score=45.49 Aligned_cols=30 Identities=17% Similarity=0.324 Sum_probs=27.7
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
+|.|+|+|.+|+.+|.+|+.+|. .++++|.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEEc
Confidence 79999999999999999999996 7888885
No 449
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=82.71 E-value=2 Score=47.36 Aligned_cols=99 Identities=16% Similarity=0.160 Sum_probs=59.1
Q ss_pred cCcEEEEe-cCcchHHHHHHHHHc-ccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeE
Q 001074 575 DAKVFIVG-SGALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (1163)
Q Consensus 575 ~~kVlvVG-aGglGce~lknLa~~-Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I 652 (1163)
..||.|+| +|.+|.++++.+... ++ --+-++|...-. . .-.|+|. ++ .+.+.+.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~-----eLv~~~d~~~~~---~------~G~d~ge----l~-----g~~~gv~- 62 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDA-----TLVGALDRTGSP---Q------LGQDAGA----FL-----GKQTGVA- 62 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTE-----EEEEEBCCTTCT---T------TTSBTTT----TT-----TCCCSCB-
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCC-----EEEEEEEecCcc---c------ccccHHH----Hh-----CCCCCce-
Confidence 36899999 899999999998864 44 222345543110 0 0123331 11 1111211
Q ss_pred EEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecCCCCc
Q 001074 653 EALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGA 710 (1163)
Q Consensus 653 ~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sgt~G~ 710 (1163)
+..+. ++.+.++|+||+++ .+++-...-..|.++++|+| .||.|+
T Consensus 63 ------v~~dl-----~~ll~~~DVVIDfT-~p~a~~~~~~~al~~G~~vV-igTTG~ 107 (272)
T 4f3y_A 63 ------LTDDI-----ERVCAEADYLIDFT-LPEGTLVHLDAALRHDVKLV-IGTTGF 107 (272)
T ss_dssp ------CBCCH-----HHHHHHCSEEEECS-CHHHHHHHHHHHHHHTCEEE-ECCCCC
T ss_pred ------ecCCH-----HHHhcCCCEEEEcC-CHHHHHHHHHHHHHcCCCEE-EECCCC
Confidence 11111 33456899999998 45555566678999999999 577775
No 450
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=82.71 E-value=1.9 Score=47.09 Aligned_cols=36 Identities=14% Similarity=0.319 Sum_probs=29.2
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~------~V~~~~r~ 56 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGY------RVVIHYHN 56 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC------eEEEEeCC
Confidence 46778888887 78999999999999997 78887644
No 451
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=82.69 E-value=2.7 Score=45.15 Aligned_cols=37 Identities=35% Similarity=0.491 Sum_probs=30.6
Q ss_pred HHHhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 173 MRRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 173 q~kL~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
|..|.+++|+|.| .||+|.++|+.|+..|. +|.++|.
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r 61 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTAR 61 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEEC
Confidence 4457788999998 58999999999999998 5777774
No 452
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=82.69 E-value=0.72 Score=50.51 Aligned_cols=35 Identities=17% Similarity=0.341 Sum_probs=30.6
Q ss_pred HhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++++|+|+||+|..++..|+..|. +++++|.+
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G~------~V~v~~R~ 151 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLDC------AVTITNRT 151 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCC------EEEEEECC
Confidence 568899999999999999999999995 78887543
No 453
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=82.67 E-value=0.68 Score=53.81 Aligned_cols=36 Identities=28% Similarity=0.514 Sum_probs=0.0
Q ss_pred HhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++|+|+|+|++|..+++.|...|+ ++|+++|.+
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~-----~~V~v~~r~ 200 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGV-----RAVLVANRT 200 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCC-----SEEEEECSS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCC-----CEEEEEeCC
No 454
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=82.59 E-value=6.9 Score=46.27 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
.+|.|||+|-.|+-||.+|+.+|. .|+++|.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcH
Confidence 589999999999999999999998 899998653
No 455
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=82.59 E-value=0.54 Score=52.33 Aligned_cols=44 Identities=16% Similarity=0.296 Sum_probs=36.4
Q ss_pred cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 168 YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 168 ~G~e~q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
|.......|.+++|.|+|+|.+|..+|+.|...|. ++..+|...
T Consensus 112 w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 155 (290)
T 3gvx_A 112 FRQSPTTLLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSS 155 (290)
T ss_dssp CCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSC
T ss_pred cccCCceeeecchheeeccCchhHHHHHHHHhhCc-EEEEEeccc
Confidence 43333356889999999999999999999999998 788888654
No 456
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=82.55 E-value=2.1 Score=48.50 Aligned_cols=38 Identities=21% Similarity=0.447 Sum_probs=31.4
Q ss_pred HHHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 571 KKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 571 ~kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
......||.|||+|.+|..++..|+..|.. ..|+++|.
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~----~el~L~Di 52 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLA----DELALVDV 52 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECS
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCC----ceEEEEeC
Confidence 345678999999999999999999999973 47899874
No 457
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=82.47 E-value=1.4 Score=50.51 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=32.5
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
.+...+|+|+|+|++|..+++.+...|. +++++|.
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~ 197 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGA-QVTILDV 197 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 5788999999999999999999999999 8999885
No 458
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=82.46 E-value=1.8 Score=46.31 Aligned_cols=35 Identities=26% Similarity=0.313 Sum_probs=29.5
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+++++++|.| +||||.++++.|+..|. +++++|.+
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~------~V~~~~r~ 42 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGA------KVIGTATS 42 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5677888887 68999999999999997 78887643
No 459
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=82.45 E-value=1.7 Score=46.07 Aligned_cols=89 Identities=10% Similarity=0.084 Sum_probs=56.5
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
+.+|+|+|+|.+|..+++.|...| - ++++|.|.- ++ +.+. +. +..
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g------~-v~vid~~~~-------------------~~----~~~~---~~--~~~ 53 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE------V-FVLAEDENV-------------------RK----KVLR---SG--ANF 53 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE------E-EEEESCGGG-------------------HH----HHHH---TT--CEE
T ss_pred CCEEEEECCChHHHHHHHHHHhCC------e-EEEEECCHH-------------------HH----HHHh---cC--CeE
Confidence 468999999999999999997665 3 778875421 11 1122 23 333
Q ss_pred EeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccc
Q 001074 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQK 700 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~ 700 (1163)
+...... ...+...-++++|.||.++++.+.-..+...|+..+.
T Consensus 54 i~gd~~~--~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~ 97 (234)
T 2aef_A 54 VHGDPTR--VSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 97 (234)
T ss_dssp EESCTTC--HHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCS
T ss_pred EEcCCCC--HHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCC
Confidence 4443332 1122223367899999999988777777777766543
No 460
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=82.42 E-value=1.9 Score=47.68 Aligned_cols=31 Identities=32% Similarity=0.549 Sum_probs=26.9
Q ss_pred CcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 576 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 576 ~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
++|+|.| +|.||..+++.|+..|. +++++|.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI------DLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC------EEEEEeC
Confidence 4799999 69999999999999986 7888764
No 461
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=82.42 E-value=2.3 Score=47.78 Aligned_cols=89 Identities=13% Similarity=0.073 Sum_probs=0.0
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCC-------EEEE
Q 001074 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAV-------VLST 252 (1163)
Q Consensus 180 ~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V-------~V~~ 252 (1163)
+|.|||+|.+|+.++.+|+.+|. .++++| |...-.+.|++.-..+ .+..
T Consensus 16 kI~iIG~G~mG~ala~~L~~~G~-~V~~~~-----------------------r~~~~~~~l~~~g~~~~~~~~~~~~~~ 71 (335)
T 1z82_A 16 RFFVLGAGSWGTVFAQMLHENGE-EVILWA-----------------------RRKEIVDLINVSHTSPYVEESKITVRA 71 (335)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEEC-----------------------SSHHHHHHHHHHSCBTTBTTCCCCSEE
T ss_pred cEEEECcCHHHHHHHHHHHhCCC-eEEEEe-----------------------CCHHHHHHHHHhCCcccCCCCeeeEEE
Q ss_pred eecCCChhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEee
Q 001074 253 LTSKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAE 298 (1163)
Q Consensus 253 ~~~~l~~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~~ 298 (1163)
..+ ..+ +..+|+||+|.-+......+.++.. .+ ..+|.+.
T Consensus 72 ~~~--~~~-~~~aDvVil~vk~~~~~~v~~~l~~-~~--~~vv~~~ 111 (335)
T 1z82_A 72 TND--LEE-IKKEDILVIAIPVQYIREHLLRLPV-KP--SMVLNLS 111 (335)
T ss_dssp ESC--GGG-CCTTEEEEECSCGGGHHHHHTTCSS-CC--SEEEECC
T ss_pred eCC--HHH-hcCCCEEEEECCHHHHHHHHHHhCc-CC--CEEEEEe
No 462
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=82.42 E-value=2.3 Score=49.71 Aligned_cols=36 Identities=19% Similarity=0.337 Sum_probs=32.8
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.|++++|.|||.|.+|..+++.|...|+ +++.+|..
T Consensus 153 el~gktvGIIGlG~IG~~vA~~l~~~G~------~V~~yd~~ 188 (416)
T 3k5p_A 153 EVRGKTLGIVGYGNIGSQVGNLAESLGM------TVRYYDTS 188 (416)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECTT
T ss_pred cCCCCEEEEEeeCHHHHHHHHHHHHCCC------EEEEECCc
Confidence 4788999999999999999999999998 88998864
No 463
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=82.39 E-value=3.5 Score=46.22 Aligned_cols=74 Identities=18% Similarity=0.206 Sum_probs=50.2
Q ss_pred eEEEEc-CChHHHHHHHHHHHh-CC-CeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 180 NILVSG-MQGLGAEIAKNLILA-GV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 180 ~VlIiG-~gglGsEiaKNLvla-GV-g~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
||.|+| +|.+|..++..|... +. .+|.|+|.+. +++..+.-|+.....+++..+...
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~--------------------~~~G~a~Dl~~~~~~~~v~~~~~~ 61 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP--------------------VTPGVAVDLSHIPTAVKIKGFSGE 61 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST--------------------THHHHHHHHHTSCSSEEEEEECSS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC--------------------CchhHHHHhhCCCCCceEEEecCC
Confidence 799999 899999999999876 54 5899998532 122223344444334566654332
Q ss_pred CChhhcCCCcEEEEecC
Q 001074 257 LTKEQLSDFQAVVFTDI 273 (1163)
Q Consensus 257 l~~e~l~~fdvVI~~~~ 273 (1163)
-+.+.+.+.|+||.+..
T Consensus 62 ~~~~~~~~aDivii~ag 78 (312)
T 3hhp_A 62 DATPALEGADVVLISAG 78 (312)
T ss_dssp CCHHHHTTCSEEEECCS
T ss_pred CcHHHhCCCCEEEEeCC
Confidence 24567889999999864
No 464
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=82.34 E-value=1.9 Score=46.40 Aligned_cols=35 Identities=17% Similarity=0.330 Sum_probs=29.9
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGA------KVVFGDIL 40 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5678899998 68999999999999997 78887654
No 465
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=82.33 E-value=0.99 Score=50.21 Aligned_cols=34 Identities=21% Similarity=0.400 Sum_probs=30.0
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
..+|.|||+|.+|..+|++|+..|. .++++|.+.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 4689999999999999999999997 688888643
No 466
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=82.30 E-value=1.1 Score=48.08 Aligned_cols=35 Identities=26% Similarity=0.471 Sum_probs=30.2
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 45 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGA------TVAIADLD 45 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5678899998 68999999999999997 78888754
No 467
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=82.26 E-value=3.6 Score=48.73 Aligned_cols=33 Identities=24% Similarity=0.334 Sum_probs=28.6
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
..+|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~------~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY------TVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC------CEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC------EEEEEcCC
Confidence 3589999999999999999999997 68887643
No 468
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=82.22 E-value=2.3 Score=47.79 Aligned_cols=44 Identities=16% Similarity=0.123 Sum_probs=36.5
Q ss_pred cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 168 YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 168 ~G~e~q~kL~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
|.......|.+++|.|||+|.+|..+|+.|...|. ++..+|...
T Consensus 129 W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~~ 172 (315)
T 3pp8_A 129 WKPLPEYTREEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRSR 172 (315)
T ss_dssp CCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESSC
T ss_pred cCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCc
Confidence 54333456889999999999999999999999998 688888644
No 469
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=82.21 E-value=2.7 Score=45.05 Aligned_cols=33 Identities=15% Similarity=0.325 Sum_probs=27.6
Q ss_pred cCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 575 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 575 ~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 35 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF------DIAVADLP 35 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC------EEEEEECG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 46788887 78999999999999997 78887643
No 470
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=82.21 E-value=4.9 Score=44.80 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEG 211 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGV-g~itLvD~d 211 (1163)
.+|.|+|+|.+|+.++..|+..|. ..+.|+|-+
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~ 48 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLS 48 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 689999999999999999999995 479999864
No 471
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=82.19 E-value=4.5 Score=42.91 Aligned_cols=35 Identities=29% Similarity=0.376 Sum_probs=29.9
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 175 kL~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
++++++|+|.| .||+|.++|+.|+..|. ++.++|.
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r 41 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADI 41 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 46788999998 58999999999999997 5888774
No 472
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=82.16 E-value=1.8 Score=46.66 Aligned_cols=80 Identities=10% Similarity=0.105 Sum_probs=51.5
Q ss_pred HHHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHH-HHHHHHHHhhCC
Q 001074 571 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKS-TVAASAATSINP 648 (1163)
Q Consensus 571 ~kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka-~vaa~~l~~~np 648 (1163)
-++++++|+|.| +||||.++++.|+..|. +++++|.+.-...+. +..+-..|+..+.+ +.+.+.+.+...
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 95 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNY------RVVATSRSIKPSADP--DIHTVAGDISKPETADRIVREGIERFG 95 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESSCCCCSST--TEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCChhhcccC--ceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence 357788899988 68999999999999997 899998764433332 23334557765543 333344444444
Q ss_pred CCeEEEEecc
Q 001074 649 RLNIEALQNR 658 (1163)
Q Consensus 649 ~~~I~~~~~~ 658 (1163)
.+.+-.+..-
T Consensus 96 ~iD~lv~nAg 105 (260)
T 3un1_A 96 RIDSLVNNAG 105 (260)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 5555555443
No 473
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=82.10 E-value=0.95 Score=51.34 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=31.5
Q ss_pred HHhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 572 kL~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
.|.+++|.|||.|.||.++++.+...|+ ++..+|.
T Consensus 138 ~l~g~tvGIiG~G~IG~~va~~~~~fg~------~v~~~d~ 172 (334)
T 3kb6_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGM------KVLCYDV 172 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC------EEEEECS
T ss_pred eecCcEEEEECcchHHHHHHHhhcccCc------eeeecCC
Confidence 4788999999999999999999999998 7888774
No 474
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=82.07 E-value=1.6 Score=46.19 Aligned_cols=36 Identities=22% Similarity=0.358 Sum_probs=30.3
Q ss_pred HHhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 572 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 572 kL~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.+++++|+|.| .|+||.++++.|+..|. +++++|.+
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~------~V~~~~r~ 39 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGA------KVMITGRH 39 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 36678889988 68999999999999997 78888754
No 475
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=82.05 E-value=3.8 Score=44.16 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=57.6
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecCCC
Q 001074 180 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 258 (1163)
Q Consensus 180 ~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~l~ 258 (1163)
+|+|.|+ |.+|..+++.|...|. +|+.++... .|+.. .+.+.+.+++..+++-|+.-.....
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--------------~D~~d--~~~~~~~~~~~~~d~vi~~a~~~~~ 69 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDKKL--------------LDITN--ISQVQQVVQEIRPHIIIHCAAYTKV 69 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECTTT--------------SCTTC--HHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEecccc--------------cCCCC--HHHHHHHHHhcCCCEEEECCcccCh
Confidence 7999995 9999999999999995 788887622 23322 2344444544434333322111000
Q ss_pred hhhcCCCcEEEEecCChhHHHHHHHHHHhcCCCceeEEeeecceeE
Q 001074 259 KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFG 304 (1163)
Q Consensus 259 ~e~l~~fdvVI~~~~~~~~~~~ln~~cr~~~~~IpfI~~~~~G~~G 304 (1163)
.......+-. -..+......+-+.|++.+ +.||..++.+.+|
T Consensus 70 ~~~~~~~~~~--~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~vy~ 111 (287)
T 3sc6_A 70 DQAEKERDLA--YVINAIGARNVAVASQLVG--AKLVYISTDYVFQ 111 (287)
T ss_dssp HHHTTCHHHH--HHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSC
T ss_pred HHHhcCHHHH--HHHHHHHHHHHHHHHHHcC--CeEEEEchhhhcC
Confidence 0000000000 0001222346778888888 7899888877665
No 476
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=82.02 E-value=4.3 Score=47.86 Aligned_cols=34 Identities=24% Similarity=0.200 Sum_probs=30.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTV 213 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V 213 (1163)
.+|.|||+|.+|..+|.+|+..|. .++++|.+.-
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHH
Confidence 589999999999999999999996 8999997643
No 477
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=81.98 E-value=1.2 Score=48.80 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=31.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 176 L~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
+.+++|+|+|+||+|..++..|...| .+++++|.
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R 150 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITNR 150 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEEC
Confidence 56789999999999999999999999 79999874
No 478
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=81.85 E-value=0.82 Score=51.13 Aligned_cols=33 Identities=18% Similarity=0.389 Sum_probs=29.4
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
.||+|||+|++|+.++..|+..|. .++++|.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~------~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH------CVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC------EEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC------eEEEEeCCh
Confidence 689999999999999999999986 888887653
No 479
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=81.76 E-value=0.28 Score=58.76 Aligned_cols=80 Identities=18% Similarity=0.223 Sum_probs=49.6
Q ss_pred HHHhcCcEEEEecCcchHHHHHHHHH----cccccCC-CccEEEecCCcc-cc---cCcCc-c-cCcccCcccchHHHHH
Q 001074 571 KKLEDAKVFIVGSGALGCEFLKNVAL----MGVSCGN-QGKLTITDDDVI-EK---SNLSR-Q-FLFRDWNIGQAKSTVA 639 (1163)
Q Consensus 571 ~kL~~~kVlvVGaGglGce~lknLa~----~Gv~~~~-~g~i~ivD~D~I-e~---SNLnR-Q-fLf~~~dIG~~Ka~va 639 (1163)
++|++.||++.|||+-|+.+++.|.. .|+.-.+ ..+|+++|..=+ .. .+|+. | .+.+..+-.. ...+
T Consensus 280 k~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~--~~~L 357 (564)
T 1pj3_A 280 KPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESI--PDTF 357 (564)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSSC--CSSH
T ss_pred CcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCCeEECCCcccchHHHHHHHHhcCccc--cCCH
Confidence 46889999999999999999999986 7851000 168999997643 21 23432 2 2222211110 0137
Q ss_pred HHHHHhhCCCCeE
Q 001074 640 ASAATSINPRLNI 652 (1163)
Q Consensus 640 a~~l~~~np~~~I 652 (1163)
.+.++...|++-|
T Consensus 358 ~eav~~vkp~vlI 370 (564)
T 1pj3_A 358 EDAVNILKPSTII 370 (564)
T ss_dssp HHHHHHHCCSEEE
T ss_pred HHHHhhcCCCEEE
Confidence 7777777777644
No 480
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=81.74 E-value=2.1 Score=46.61 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=28.5
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
+.+++|+|.| .|+||.++++.|+..|. ++++++.
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~------~V~~~~r 76 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVS------HVICISR 76 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSS------EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCC------EEEEEcC
Confidence 5677899998 68999999999999987 6777653
No 481
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=81.73 E-value=2.3 Score=44.84 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=28.1
Q ss_pred HhcCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEec
Q 001074 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITD 611 (1163)
Q Consensus 573 L~~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD 611 (1163)
+++++|+|.| .|+||.++++.|+..|. +++++|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~------~V~~~~ 36 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA------NIVLNG 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC------EEEEEc
Confidence 5677889888 68999999999999997 777774
No 482
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=81.72 E-value=0.95 Score=53.22 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=33.3
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCC--CeEEEEe
Q 001074 175 RLFASNILVSGMQGLGAEIAKNLILAGV--KSVTLHD 209 (1163)
Q Consensus 175 kL~~s~VlIiG~gglGsEiaKNLvlaGV--g~itLvD 209 (1163)
.+++.+|+|+|+||.|..+++.|+..|+ ++|+|+|
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 4678999999999999999999999999 8999999
No 483
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=81.69 E-value=2.5 Score=45.48 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=29.0
Q ss_pred hcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 177 FASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 177 ~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
+.++|+|.| .|++|.++++.|+..|. ++.+.|.+.
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~ 37 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSP 37 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCC
Confidence 346799998 68999999999999995 788887654
No 484
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=81.69 E-value=4.3 Score=42.86 Aligned_cols=35 Identities=37% Similarity=0.490 Sum_probs=29.9
Q ss_pred HhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 001074 175 RLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDE 210 (1163)
Q Consensus 175 kL~~s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD~ 210 (1163)
.|++++|+|.|+ ||+|.++++.|+..|. ++.++|.
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r 46 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGR 46 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEec
Confidence 467889999984 8999999999999997 5888774
No 485
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=81.66 E-value=3 Score=46.44 Aligned_cols=67 Identities=19% Similarity=0.257 Sum_probs=43.7
Q ss_pred HHHHHHhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcC
Q 001074 170 RETMRRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN 246 (1163)
Q Consensus 170 ~e~q~kL~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp 246 (1163)
...|..|.++.|+|.| .||+|.++|+.|+..|. ++.++|.+.-. .+. ..-...+++...+.+.+..+
T Consensus 19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~----~~~-----~~~~~~~~~~~~~~~~~~~~ 86 (322)
T 3qlj_A 19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGL----DGS-----PASGGSAAQSVVDEITAAGG 86 (322)
T ss_dssp ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCT----TSS-----BTCTTSHHHHHHHHHHHTTC
T ss_pred CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccc----ccc-----ccccHHHHHHHHHHHHhcCC
Confidence 3445667888999997 57999999999999997 78888764311 110 01123466666777766543
No 486
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=81.65 E-value=2 Score=47.18 Aligned_cols=93 Identities=13% Similarity=0.091 Sum_probs=0.0
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 001074 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (1163)
Q Consensus 177 ~~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~V~~~~~~ 256 (1163)
+..+|.|||+|.+|..++++|...|. .++++| |.....+.+.+. ......
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~-----------------------~~~~~~~~~~~~------g~~~~~ 52 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGV-TVYAFD-----------------------LMEANVAAVVAQ------GAQACE 52 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTC-EEEEEC-----------------------SSHHHHHHHHTT------TCEECS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCC-eEEEEe-----------------------CCHHHHHHHHHC------CCeecC
Q ss_pred CChhhcCCCcEEEEec-CChhHHHHHH---HHHHhcCCCceeEEeee
Q 001074 257 LTKEQLSDFQAVVFTD-ISLDKAIEFD---DFCHNHQPAISFIKAEV 299 (1163)
Q Consensus 257 l~~e~l~~fdvVI~~~-~~~~~~~~ln---~~cr~~~~~IpfI~~~~ 299 (1163)
-.++.+.++|+||.|. .+......+. ++.....+...+|...+
T Consensus 53 ~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~ 99 (301)
T 3cky_A 53 NNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSS 99 (301)
T ss_dssp SHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCC
T ss_pred CHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCC
No 487
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=81.63 E-value=1 Score=49.81 Aligned_cols=34 Identities=21% Similarity=0.165 Sum_probs=30.0
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001074 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (1163)
Q Consensus 178 ~s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~ 212 (1163)
..+|.|||+|.+|..+|++|+..|. .++++|.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 4689999999999999999999996 688988644
No 488
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=81.51 E-value=4.6 Score=44.17 Aligned_cols=29 Identities=24% Similarity=0.354 Sum_probs=23.3
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEe
Q 001074 179 SNILVSGM-QGLGAEIAKNLILAGVKSVTLHD 209 (1163)
Q Consensus 179 s~VlIiG~-gglGsEiaKNLvlaGVg~itLvD 209 (1163)
++|||.|+ |++|..+++.|...| .+.+++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~ 31 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVID 31 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEE
Confidence 37999995 899999999999999 444444
No 489
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=81.45 E-value=0.76 Score=51.77 Aligned_cols=32 Identities=28% Similarity=0.451 Sum_probs=28.7
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
..||.|||+|++|+.++..|+..|. .++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~------~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE------AINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC------CEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC------EEEEEEC
Confidence 4689999999999999999999997 7888764
No 490
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=81.43 E-value=5.8 Score=44.63 Aligned_cols=109 Identities=15% Similarity=0.084 Sum_probs=0.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCCCE---------
Q 001074 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVV--------- 249 (1163)
Q Consensus 179 s~VlIiG~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~V~--------- 249 (1163)
.+|.|||+|-.|+-||-.++.+|. .++|+|.+.-.... +..+......++.+....-.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~------------~~~~i~~~l~~~~~~g~~~~~~~~~~~l~ 73 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITG------------ALENIRKEMKSLQQSGSLKGSLSAEEQLS 73 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHH------------HHHHHHHHHHHHHHTTCCCSSSCHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHH------------HHHHHHHHHHHHHHcCCCCCccCHHHHHh
Q ss_pred -EEEeecCCChhhcCCCcEEEEecC-ChhHHHHHHHHHHhcCCCceeEEeeecce
Q 001074 250 -LSTLTSKLTKEQLSDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIKAEVRGL 302 (1163)
Q Consensus 250 -V~~~~~~l~~e~l~~fdvVI~~~~-~~~~~~~ln~~cr~~~~~IpfI~~~~~G~ 302 (1163)
++..++ -.+.+.+.|+||-+.. +++....+-.-..+.-++-.+|.+.|.++
T Consensus 74 ~i~~~~~--l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl 126 (319)
T 3ado_A 74 LISSCTN--LAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCL 126 (319)
T ss_dssp TEEEECC--HHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSC
T ss_pred hcccccc--hHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhc
No 491
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=81.39 E-value=0.88 Score=50.36 Aligned_cols=33 Identities=21% Similarity=0.424 Sum_probs=29.6
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
.+|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~------~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH------TVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECCH
Confidence 479999999999999999999997 899998653
No 492
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=81.39 E-value=5.9 Score=42.90 Aligned_cols=93 Identities=14% Similarity=0.169 Sum_probs=0.0
Q ss_pred CHHHHHHhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCccCchHHHHHHHHHHHhcCC
Q 001074 169 GRETMRRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNA 247 (1163)
Q Consensus 169 G~e~q~kL~~s~VlIiG-~gglGsEiaKNLvlaGVg~itLvD~d~V~~sDL~rqff~~~~DiGk~Kaea~~~~L~eLNp~ 247 (1163)
|...|..|++++|+|.| .||+|.++|+.|+..|. ++.++|.+.-........ -...+.+...+.+.+..+
T Consensus 1 ~p~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~- 71 (281)
T 3s55_A 1 GPGSMADFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPL-------ATADDLAETVALVEKTGR- 71 (281)
T ss_dssp -----CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCC-------CCHHHHHHHHHHHHHTTC-
T ss_pred CCCcccccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCcccccccccc-------ccHHHHHHHHHHHHhcCC-
Q ss_pred CEEEEeecCCCh------------hhcCCCcEEEEe
Q 001074 248 VVLSTLTSKLTK------------EQLSDFQAVVFT 271 (1163)
Q Consensus 248 V~V~~~~~~l~~------------e~l~~fdvVI~~ 271 (1163)
.+.....++++ +.+...|++|.+
T Consensus 72 -~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 106 (281)
T 3s55_A 72 -RCISAKVDVKDRAALESFVAEAEDTLGGIDIAITN 106 (281)
T ss_dssp -CEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred -eEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEC
No 493
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=81.36 E-value=2.4 Score=48.45 Aligned_cols=93 Identities=16% Similarity=0.158 Sum_probs=60.8
Q ss_pred CcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001074 576 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (1163)
Q Consensus 576 ~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~~~I~~ 654 (1163)
.||.||| .|.+|.|+++.|+.--. .+|+.+. ..+..|++ +....|+..
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~-----~el~~l~---------------S~~~aG~~--------~~~~~p~~~--- 62 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPE-----AKITYLS---------------SRTYAGKK--------LEEIFPSTL--- 62 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTT-----EEEEEEE---------------CSTTTTSB--------HHHHCGGGC---
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCC-----cEEEEEe---------------CcccccCC--------hHHhChhhc---
Confidence 4799998 69999999999997644 5665542 22345543 333345443
Q ss_pred EeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEecC
Q 001074 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESG 706 (1163)
Q Consensus 655 ~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~sg 706 (1163)
....+.+ .+ .+++++++|+|+.|+..-.++.++... .+..+||.+
T Consensus 63 ~~l~~~~-~~---~~~~~~~~Dvvf~alp~~~s~~~~~~~---~g~~VIDlS 107 (351)
T 1vkn_A 63 ENSILSE-FD---PEKVSKNCDVLFTALPAGASYDLVREL---KGVKIIDLG 107 (351)
T ss_dssp CCCBCBC-CC---HHHHHHHCSEEEECCSTTHHHHHHTTC---CSCEEEESS
T ss_pred cCceEEe-CC---HHHhhcCCCEEEECCCcHHHHHHHHHh---CCCEEEECC
Confidence 1111211 00 134568899999999999999998876 677777644
No 494
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=81.34 E-value=2.5 Score=47.84 Aligned_cols=85 Identities=22% Similarity=0.248 Sum_probs=53.0
Q ss_pred cCcEEEEecCcchHHHHHHHHHcc---------cccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHh
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMG---------VSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATS 645 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~G---------v~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~ 645 (1163)
..||.|+|+|.+|..+++.|.... + .-..|.|.|. .| ..+++..
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~-----~lvaV~d~~~------~~-----~~~~~~~----------- 55 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVP-----RFLGVLVRDP------RK-----PRAIPQE----------- 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEE-----EEEEEECSCT------TS-----CCSSCGG-----------
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCE-----EEEEEEECCH------HH-----hhccCcc-----------
Confidence 358999999999999999998753 3 2235556542 11 1111100
Q ss_pred hCCCCeEEEEeccCCcccccccchhhhccCCEEEEccCchHHHHHHHhhcccccccEEe
Q 001074 646 INPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLE 704 (1163)
Q Consensus 646 ~np~~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~~PlI~ 704 (1163)
.+..+.+ +++ ..|+|++|+-+.......-..|.+.||.++.
T Consensus 56 ------------~~~~d~~-----~ll-~iDvVve~t~~~~~a~~~~~~AL~aGKhVVt 96 (332)
T 2ejw_A 56 ------------LLRAEPF-----DLL-EADLVVEAMGGVEAPLRLVLPALEAGIPLIT 96 (332)
T ss_dssp ------------GEESSCC-----CCT-TCSEEEECCCCSHHHHHHHHHHHHTTCCEEE
T ss_pred ------------cccCCHH-----HHh-CCCEEEECCCCcHHHHHHHHHHHHcCCeEEE
Confidence 0111111 233 8999999999875544455578889999884
No 495
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=81.32 E-value=2.8 Score=44.78 Aligned_cols=33 Identities=15% Similarity=0.294 Sum_probs=27.5
Q ss_pred cCcEEEEe-cCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 575 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 575 ~~kVlvVG-aGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 35 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF------AVAIADYN 35 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 46788887 78999999999999997 78887643
No 496
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=81.28 E-value=0.86 Score=50.43 Aligned_cols=35 Identities=23% Similarity=0.507 Sum_probs=0.0
Q ss_pred HhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 573 L~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
|.+++|+|||+|++|..+++.|...|+ +++++|..
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~------~V~~~dr~ 187 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGA------KVKVGARE 187 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCC------EEEEEECC
No 497
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=81.25 E-value=0.82 Score=54.36 Aligned_cols=36 Identities=17% Similarity=0.320 Sum_probs=32.5
Q ss_pred HhcCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCCc
Q 001074 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (1163)
Q Consensus 573 L~~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D~ 614 (1163)
|.+++|+|+|+|+||..+++.|+..|. +++++|.+.
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA------~Viv~D~~~ 298 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGA------RVIVTEIDP 298 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSCH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC------EEEEEcCCH
Confidence 778999999999999999999999998 888887653
No 498
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=81.19 E-value=3.5 Score=46.63 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=30.2
Q ss_pred cCcEEEEecCcchHHHHHHHHHcccccCCCccEEEecC
Q 001074 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (1163)
Q Consensus 575 ~~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~ 612 (1163)
..||.|||+|.+|..++..|+..|+. +.++++|-
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~----~ev~L~Di 54 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLA----DEVALVDV 54 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCC----SEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEEC
Confidence 46899999999999999999999984 57999875
No 499
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=81.19 E-value=2.9 Score=46.93 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=29.8
Q ss_pred CcEEEEecCcchHHHHHHHHHcccccCCCccEEEecCC
Q 001074 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (1163)
Q Consensus 576 ~kVlvVGaGglGce~lknLa~~Gv~~~~~g~i~ivD~D 613 (1163)
.||.|+|+|.+|..++..|+..|+. ..|+++|.+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~----~el~l~D~~ 34 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVA----KEVVMVDIK 34 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCc
Confidence 3799999999999999999999983 489998864
No 500
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=81.14 E-value=2.2 Score=47.19 Aligned_cols=110 Identities=10% Similarity=0.088 Sum_probs=0.0
Q ss_pred HhcCcEEEEec-CcchHHHHHHHHHcc--cccCCCccEEEecCCcccccCcCcccCcccCcccchHHHHHHHHHHhhCCC
Q 001074 573 LEDAKVFIVGS-GALGCEFLKNVALMG--VSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR 649 (1163)
Q Consensus 573 L~~~kVlvVGa-GglGce~lknLa~~G--v~~~~~g~i~ivD~D~Ie~SNLnRQfLf~~~dIG~~Ka~vaa~~l~~~np~ 649 (1163)
+.+.+|+|.|+ |+||..+++.|+..| . +++++|...-.... +.+..+...
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~------~V~~~~r~~~~~~~---------------------~~~~~~~~~ 53 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDW------EVINIDKLGYGSNP---------------------ANLKDLEDD 53 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTC------EEEEEECCCTTCCG---------------------GGGTTTTTC
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCC------EEEEEecCcccCch---------------------hHHhhhccC
Q ss_pred CeEEEEeccCCcccccccchhhhccCCEEEEccC-----------------chHHHHHHHhhcccccc--cEEecCCCCc
Q 001074 650 LNIEALQNRVGPETENVFDDTFWENITCVINALD-----------------NVNARLYVDQRCLYFQK--PLLESGTLGA 710 (1163)
Q Consensus 650 ~~I~~~~~~v~~~~e~~~~~~f~~~~DvVi~alD-----------------n~~aR~~v~~~c~~~~~--PlI~sgt~G~ 710 (1163)
-+++.+...+.....- .+.+.++|+||++.. |+..-..+-+.|...+. .+|..++.+.
T Consensus 54 ~~~~~~~~Dl~d~~~~---~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v 130 (336)
T 2hun_A 54 PRYTFVKGDVADYELV---KELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEV 130 (336)
T ss_dssp TTEEEEECCTTCHHHH---HHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGG
T ss_pred CceEEEEcCCCCHHHH---HHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHH
Q ss_pred cc
Q 001074 711 KC 712 (1163)
Q Consensus 711 ~G 712 (1163)
.|
T Consensus 131 yg 132 (336)
T 2hun_A 131 YG 132 (336)
T ss_dssp GC
T ss_pred HC
Done!