Query 001076
Match_columns 1163
No_of_seqs 590 out of 2985
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 09:50:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001076.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/001076hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lv7a_ c.37.1.20 (A:) AAA dom 100.0 3.4E-35 2.5E-39 319.6 20.6 218 941-1162 4-225 (256)
2 d1ixza_ c.37.1.20 (A:) AAA dom 100.0 8.7E-35 6.3E-39 314.7 20.6 215 944-1162 4-222 (247)
3 d1e32a2 c.37.1.20 (A:201-458) 100.0 2E-34 1.4E-38 313.2 16.4 213 946-1162 1-215 (258)
4 d1r7ra3 c.37.1.20 (A:471-735) 100.0 3E-33 2.2E-37 305.2 11.8 215 945-1162 3-221 (265)
5 d1d2na_ c.37.1.20 (A:) Hexamer 99.9 6.5E-23 4.8E-27 220.9 11.9 168 981-1154 37-206 (246)
6 d1ofha_ c.37.1.20 (A:) HslU {H 99.8 2E-21 1.5E-25 215.5 14.1 180 951-1130 16-212 (309)
7 d1gxca_ b.26.1.2 (A:) Chk2 kin 99.8 3.4E-21 2.5E-25 185.1 12.9 106 133-239 1-116 (116)
8 d1w44a_ c.37.1.11 (A:) NTPase 99.8 6.7E-22 4.9E-26 220.1 2.2 159 970-1134 109-276 (321)
9 d1lv7a_ c.37.1.20 (A:) AAA dom 99.8 1.1E-18 8.2E-23 188.7 12.2 216 445-882 3-235 (256)
10 d1e32a2 c.37.1.20 (A:201-458) 99.7 8.4E-19 6.1E-23 189.4 7.9 241 451-912 1-257 (258)
11 d1in4a2 c.37.1.20 (A:17-254) H 99.7 5.6E-17 4.1E-21 170.7 21.2 186 946-1153 6-199 (238)
12 d1lgpa_ b.26.1.2 (A:) Cell cyc 99.7 3.3E-18 2.4E-22 163.3 10.1 103 132-237 2-112 (113)
13 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.7 2.6E-16 1.9E-20 165.9 20.5 192 945-1157 5-204 (239)
14 d1ixza_ c.37.1.20 (A:) AAA dom 99.7 3.1E-17 2.3E-21 176.3 9.2 213 449-883 4-233 (247)
15 d1iqpa2 c.37.1.20 (A:2-232) Re 99.6 2.4E-15 1.7E-19 157.6 17.5 175 945-1152 20-202 (231)
16 d1sxjc2 c.37.1.20 (C:12-238) R 99.6 9.9E-15 7.2E-19 152.2 17.6 177 945-1152 10-192 (227)
17 d1sxja2 c.37.1.20 (A:295-547) 99.6 1.6E-14 1.2E-18 152.3 17.7 192 945-1152 10-218 (253)
18 d1njfa_ c.37.1.20 (A:) delta p 99.5 4.3E-14 3.2E-18 149.7 17.5 175 945-1155 8-211 (239)
19 d1sxjb2 c.37.1.20 (B:7-230) Re 99.5 5.4E-14 4E-18 146.8 15.1 177 945-1158 11-200 (224)
20 d1sxje2 c.37.1.20 (E:4-255) Re 99.5 2.6E-13 1.9E-17 142.6 19.3 179 945-1153 7-226 (252)
21 d1r6bx3 c.37.1.20 (X:437-751) 99.5 1.8E-13 1.3E-17 151.6 17.0 194 950-1160 23-270 (315)
22 d1sxjd2 c.37.1.20 (D:26-262) R 99.5 3.3E-13 2.4E-17 140.6 17.7 176 945-1153 8-202 (237)
23 d1r7ra3 c.37.1.20 (A:471-735) 99.5 3.2E-15 2.4E-19 161.8 1.8 175 644-886 42-235 (265)
24 d1r6bx2 c.37.1.20 (X:169-436) 99.4 3E-13 2.2E-17 146.6 15.9 180 948-1151 17-218 (268)
25 d1qvra3 c.37.1.20 (A:536-850) 99.4 5.1E-13 3.7E-17 148.0 15.8 194 950-1160 24-275 (315)
26 d1jbka_ c.37.1.20 (A:) ClpB, A 99.4 4.6E-13 3.4E-17 138.6 11.3 156 948-1128 21-194 (195)
27 d1um8a_ c.37.1.20 (A:) ClpX {H 99.4 1E-12 7.6E-17 148.2 15.0 210 950-1159 18-325 (364)
28 d1svma_ c.37.1.20 (A:) Papillo 99.3 5.7E-14 4.1E-18 158.5 -2.2 154 985-1162 155-327 (362)
29 d1l8qa2 c.37.1.20 (A:77-289) C 99.3 4E-11 2.9E-15 125.3 19.3 188 945-1161 6-206 (213)
30 d1a5ta2 c.37.1.20 (A:1-207) de 99.3 4.3E-11 3.1E-15 124.3 18.7 172 953-1161 6-205 (207)
31 d1g6ga_ b.26.1.2 (A:) Phosphot 99.3 8.3E-12 6E-16 120.9 12.1 97 134-234 5-118 (127)
32 d1qvra2 c.37.1.20 (A:149-535) 99.3 8.6E-12 6.3E-16 141.6 13.0 179 948-1151 21-221 (387)
33 d1fnna2 c.37.1.20 (A:1-276) CD 99.2 1.1E-10 8.2E-15 121.9 19.8 183 949-1151 16-227 (276)
34 d1dmza_ b.26.1.2 (A:) Phosphot 99.2 8.7E-12 6.3E-16 125.1 10.2 92 134-226 5-111 (158)
35 d1g41a_ c.37.1.20 (A:) HslU {H 99.2 9.1E-11 6.6E-15 135.3 19.1 200 951-1150 16-380 (443)
36 d2brfa1 b.26.1.2 (A:8-108) Pol 99.2 2.5E-11 1.8E-15 113.1 10.9 92 135-232 1-96 (101)
37 d1g8pa_ c.37.1.20 (A:) ATPase 99.2 1.8E-11 1.3E-15 135.3 11.4 163 946-1130 4-213 (333)
38 d1w5sa2 c.37.1.20 (A:7-293) CD 99.2 6E-11 4.4E-15 124.7 13.3 195 949-1153 16-246 (287)
39 d2piea1 b.26.1.2 (A:13-139) Ub 99.1 9.7E-11 7.1E-15 113.4 11.2 101 133-238 5-115 (127)
40 d2ff4a3 b.26.1.2 (A:284-382) P 99.1 1.7E-10 1.2E-14 106.9 11.8 91 133-234 5-96 (99)
41 d2affa1 b.26.1.2 (A:3-100) Ant 99.0 4.3E-10 3.1E-14 103.7 10.6 82 144-235 15-97 (98)
42 d1uhta_ b.26.1.2 (A:) FHA doma 99.0 3.2E-10 2.4E-14 108.2 9.4 76 151-234 32-109 (118)
43 d1mzka_ b.26.1.2 (A:) Kinase a 98.9 7.9E-10 5.8E-14 106.0 8.6 73 153-228 31-112 (122)
44 d2g1la1 b.26.1.2 (A:498-599) K 98.8 6.4E-09 4.7E-13 96.4 10.8 80 149-234 21-101 (102)
45 d1r6bx2 c.37.1.20 (X:169-436) 98.8 2.3E-10 1.7E-14 123.6 0.2 170 689-879 26-241 (268)
46 d1qvra2 c.37.1.20 (A:149-535) 98.8 1.1E-10 8E-15 132.4 -3.1 171 689-881 30-247 (387)
47 d1ny5a2 c.37.1.20 (A:138-384) 98.7 9.3E-09 6.8E-13 109.5 8.3 163 950-1134 1-190 (247)
48 d1w44a_ c.37.1.11 (A:) NTPase 98.7 5.3E-10 3.9E-14 123.5 -2.0 132 646-842 126-275 (321)
49 d2gnoa2 c.37.1.20 (A:11-208) g 98.7 6.4E-08 4.7E-12 99.6 13.6 116 984-1121 15-140 (198)
50 d1gvnb_ c.37.1.21 (B:) Plasmid 98.6 1.1E-09 8E-14 115.1 -1.8 68 946-1023 4-71 (273)
51 d2fnaa2 c.37.1.20 (A:1-283) Ar 98.6 1.2E-06 8.5E-11 90.7 20.9 182 947-1161 10-248 (283)
52 d1wlna1 b.26.1.2 (A:8-114) Afa 98.5 8.6E-08 6.3E-12 89.6 9.2 79 148-235 25-106 (107)
53 d1ofha_ c.37.1.20 (A:) HslU {H 98.5 2.5E-08 1.8E-12 109.2 5.0 66 461-530 19-85 (309)
54 d1d2na_ c.37.1.20 (A:) Hexamer 98.4 9.8E-09 7.1E-13 109.2 -1.6 102 643-749 40-155 (246)
55 d1jbka_ c.37.1.20 (A:) ClpB, A 98.0 6.6E-07 4.8E-11 91.9 1.4 112 689-821 30-179 (195)
56 d1ye8a1 c.37.1.11 (A:1-178) Hy 97.9 3E-05 2.2E-09 75.6 12.5 26 986-1011 2-27 (178)
57 d2a5yb3 c.37.1.20 (B:109-385) 97.6 0.00076 5.5E-08 71.6 17.6 179 932-1153 9-221 (277)
58 d1kaga_ c.37.1.2 (A:) Shikimat 97.6 2.6E-05 1.9E-09 73.7 5.2 32 985-1016 3-34 (169)
59 d1lw7a2 c.37.1.1 (A:220-411) T 97.5 1.7E-05 1.2E-09 76.7 3.3 37 984-1020 7-43 (192)
60 d1rkba_ c.37.1.1 (A:) Adenylat 97.3 4.6E-05 3.4E-09 73.3 3.5 32 985-1016 5-36 (173)
61 d1viaa_ c.37.1.2 (A:) Shikimat 97.1 8.8E-05 6.4E-09 72.5 3.4 32 985-1016 1-32 (161)
62 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.1 8.3E-05 6E-09 71.8 3.0 36 985-1020 5-40 (176)
63 d1e6ca_ c.37.1.2 (A:) Shikimat 97.1 0.00012 8.5E-09 71.8 3.6 32 985-1016 3-34 (170)
64 d2iyva1 c.37.1.2 (A:2-166) Shi 97.0 0.00013 9.8E-09 71.0 3.5 31 986-1016 3-33 (165)
65 d1qhxa_ c.37.1.3 (A:) Chloramp 97.0 0.00029 2.1E-08 67.5 5.2 33 985-1017 4-36 (178)
66 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.9 0.00036 2.6E-08 66.9 4.9 24 985-1008 2-25 (189)
67 d1knqa_ c.37.1.17 (A:) Glucona 96.8 0.00033 2.4E-08 67.3 4.3 32 985-1016 7-38 (171)
68 d2bdta1 c.37.1.25 (A:1-176) Hy 96.8 0.00032 2.3E-08 66.8 4.1 28 986-1013 4-31 (176)
69 d1tf7a2 c.37.1.11 (A:256-497) 96.7 0.0045 3.3E-07 62.8 12.2 73 985-1057 27-130 (242)
70 d1zina1 c.37.1.1 (A:1-125,A:16 96.6 0.00065 4.8E-08 66.2 4.8 30 986-1015 2-31 (182)
71 d1y63a_ c.37.1.1 (A:) Probable 96.6 0.00072 5.2E-08 64.9 5.0 26 985-1010 6-31 (174)
72 d1p9ra_ c.37.1.11 (A:) Extrace 96.6 0.003 2.2E-07 70.5 10.9 96 944-1054 133-238 (401)
73 d1zaka1 c.37.1.1 (A:3-127,A:15 96.5 0.00054 3.9E-08 67.9 3.6 32 984-1015 3-34 (189)
74 d2qy9a2 c.37.1.10 (A:285-495) 96.5 0.012 8.9E-07 60.2 14.0 134 984-1125 9-170 (211)
75 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.5 0.0009 6.6E-08 66.3 4.8 30 985-1014 7-36 (194)
76 d1ak2a1 c.37.1.1 (A:14-146,A:1 96.5 0.00099 7.2E-08 65.9 5.1 31 985-1015 4-34 (190)
77 d1m8pa3 c.37.1.15 (A:391-573) 96.5 0.00042 3.1E-08 66.4 2.2 26 985-1010 7-32 (183)
78 d1okkd2 c.37.1.10 (D:97-303) G 96.4 0.0055 4E-07 62.6 10.2 71 985-1055 7-100 (207)
79 d2cdna1 c.37.1.1 (A:1-181) Ade 96.4 0.0012 8.4E-08 64.9 4.7 30 986-1015 2-31 (181)
80 d1u94a1 c.37.1.11 (A:6-268) Re 96.4 0.0041 3E-07 65.8 9.4 73 985-1057 55-146 (263)
81 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.3 0.0014 1E-07 65.5 5.4 31 985-1015 7-37 (189)
82 d1teva_ c.37.1.1 (A:) UMP/CMP 96.3 0.0013 9.7E-08 64.9 4.8 30 985-1014 2-31 (194)
83 d1ukza_ c.37.1.1 (A:) Uridylat 96.3 0.0012 8.8E-08 65.6 4.4 31 985-1015 9-39 (196)
84 d1s3ga1 c.37.1.1 (A:1-125,A:16 96.3 0.0014 1E-07 64.4 4.8 30 986-1015 2-31 (182)
85 d1x6va3 c.37.1.4 (A:34-228) Ad 96.2 0.00044 3.2E-08 67.7 0.9 28 985-1012 20-47 (195)
86 d1akya1 c.37.1.1 (A:3-130,A:16 96.2 0.0015 1.1E-07 64.2 4.8 31 985-1015 3-33 (180)
87 d1ckea_ c.37.1.1 (A:) CMP kina 96.2 0.0013 9.8E-08 65.5 4.4 29 986-1014 5-33 (225)
88 d3adka_ c.37.1.1 (A:) Adenylat 96.2 0.0015 1.1E-07 64.8 4.6 35 985-1021 9-43 (194)
89 d1bifa1 c.37.1.7 (A:37-249) 6- 96.1 0.0037 2.7E-07 61.6 7.2 33 986-1018 4-39 (213)
90 d1e4va1 c.37.1.1 (A:1-121,A:15 96.1 0.0018 1.3E-07 63.3 4.5 30 986-1015 2-31 (179)
91 d1tuea_ c.37.1.20 (A:) Replica 96.1 0.008 5.9E-07 61.2 9.5 123 985-1134 54-202 (205)
92 d1a1va1 c.37.1.14 (A:190-325) 96.1 0.016 1.2E-06 53.8 11.1 32 985-1016 9-40 (136)
93 d1vmaa2 c.37.1.10 (A:82-294) G 96.0 0.021 1.6E-06 58.4 12.6 26 983-1008 10-35 (213)
94 d1q3ta_ c.37.1.1 (A:) CMP kina 95.9 0.0023 1.7E-07 64.2 4.5 28 987-1014 6-33 (223)
95 d1yj5a2 c.37.1.1 (A:351-522) 5 95.9 0.0034 2.5E-07 61.8 5.4 33 984-1016 14-46 (172)
96 d1tf7a1 c.37.1.11 (A:14-255) C 95.9 0.025 1.9E-06 55.9 12.0 76 983-1058 25-140 (242)
97 d1xp8a1 c.37.1.11 (A:15-282) R 95.8 0.018 1.3E-06 60.9 11.3 75 985-1059 58-151 (268)
98 d1ly1a_ c.37.1.1 (A:) Polynucl 95.7 0.0025 1.8E-07 59.9 3.5 33 986-1019 4-36 (152)
99 d1cr2a_ c.37.1.11 (A:) Gene 4 95.6 0.027 2E-06 58.3 11.5 36 983-1018 34-73 (277)
100 d1g6oa_ c.37.1.11 (A:) Hexamer 95.6 0.0048 3.5E-07 67.1 5.5 69 985-1053 167-245 (323)
101 d1j8yf2 c.37.1.10 (F:87-297) G 95.5 0.014 1E-06 59.7 8.6 72 983-1054 11-105 (211)
102 d1ls1a2 c.37.1.10 (A:89-295) G 95.5 0.057 4.2E-06 54.8 13.1 71 985-1055 11-104 (207)
103 d1yksa1 c.37.1.14 (A:185-324) 95.4 0.013 9.1E-07 53.5 7.3 20 983-1002 6-25 (140)
104 d1np6a_ c.37.1.10 (A:) Molybdo 95.3 0.0069 5.1E-07 57.4 4.9 31 986-1016 4-37 (170)
105 d1khta_ c.37.1.1 (A:) Adenylat 95.1 0.0057 4.1E-07 58.5 3.9 32 985-1016 2-36 (190)
106 d1w36d1 c.37.1.19 (D:2-360) Ex 95.1 0.034 2.5E-06 60.9 10.8 20 986-1005 165-184 (359)
107 d1ixsb2 c.37.1.20 (B:4-242) Ho 95.0 0.014 1E-06 59.3 6.6 64 452-529 7-70 (239)
108 d1mo6a1 c.37.1.11 (A:1-269) Re 95.0 0.028 2E-06 59.5 9.1 73 985-1057 61-152 (269)
109 d1nksa_ c.37.1.1 (A:) Adenylat 94.7 0.0092 6.7E-07 57.3 4.2 31 986-1016 3-36 (194)
110 d1m7ga_ c.37.1.4 (A:) Adenosin 94.7 0.011 8E-07 60.0 4.8 37 985-1021 25-65 (208)
111 d1szpa2 c.37.1.11 (A:145-395) 94.4 0.048 3.5E-06 54.1 8.8 73 985-1057 35-143 (251)
112 d1rz3a_ c.37.1.6 (A:) Hypothet 94.2 0.04 2.9E-06 53.0 7.5 31 987-1017 25-58 (198)
113 d1svma_ c.37.1.20 (A:) Papillo 93.8 5.4E-05 4E-09 84.2 -16.4 63 818-883 275-338 (362)
114 d1u0ja_ c.37.1.20 (A:) Rep 40 93.5 0.061 4.5E-06 56.5 7.8 55 985-1054 105-159 (267)
115 d1lvga_ c.37.1.1 (A:) Guanylat 93.4 0.026 1.9E-06 55.9 4.6 28 986-1013 2-29 (190)
116 d1gkya_ c.37.1.1 (A:) Guanylat 93.4 0.025 1.8E-06 55.7 4.3 28 985-1012 2-29 (186)
117 d1in4a2 c.37.1.20 (A:17-254) H 93.2 0.046 3.4E-06 55.1 6.1 65 452-530 7-71 (238)
118 d2fh5b1 c.37.1.8 (B:63-269) Si 93.1 0.24 1.8E-05 48.5 11.4 23 985-1007 1-23 (207)
119 d1wb9a2 c.37.1.12 (A:567-800) 93.1 0.28 2E-05 50.3 12.2 67 985-1053 42-130 (234)
120 d2gj8a1 c.37.1.8 (A:216-376) P 92.8 0.13 9.6E-06 48.1 8.3 21 986-1006 3-23 (161)
121 d1nlfa_ c.37.1.11 (A:) Hexamer 92.7 0.31 2.2E-05 49.7 11.9 25 984-1008 29-53 (274)
122 d1zd9a1 c.37.1.8 (A:18-181) AD 92.6 0.21 1.5E-05 47.2 9.6 22 986-1007 4-25 (164)
123 d1r8sa_ c.37.1.8 (A:) ADP-ribo 92.4 0.27 2E-05 45.1 10.1 23 986-1008 2-24 (160)
124 d1wf3a1 c.37.1.8 (A:3-180) GTP 92.3 0.56 4.1E-05 44.7 12.5 22 986-1007 7-28 (178)
125 d1n0wa_ c.37.1.11 (A:) DNA rep 91.8 0.051 3.7E-06 52.0 4.0 26 983-1008 22-47 (242)
126 d1xjca_ c.37.1.10 (A:) Molybdo 91.5 0.073 5.3E-06 50.8 4.8 30 987-1016 4-36 (165)
127 d1g41a_ c.37.1.20 (A:) HslU {H 91.3 0.08 5.8E-06 59.5 5.5 66 461-530 19-85 (443)
128 d1nrjb_ c.37.1.8 (B:) Signal r 91.1 0.35 2.6E-05 46.8 9.6 24 985-1008 4-27 (209)
129 d1h65a_ c.37.1.8 (A:) Chloropl 91.0 0.24 1.7E-05 51.2 8.6 24 984-1007 32-55 (257)
130 d1uj2a_ c.37.1.6 (A:) Uridine- 91.0 0.059 4.3E-06 53.5 3.7 26 986-1011 4-29 (213)
131 d1znwa1 c.37.1.1 (A:20-201) Gu 90.8 0.061 4.5E-06 52.3 3.5 25 985-1009 3-27 (182)
132 d1ctqa_ c.37.1.8 (A:) cH-p21 R 90.6 0.18 1.3E-05 47.7 6.7 22 986-1007 5-26 (166)
133 d1htwa_ c.37.1.18 (A:) Hypothe 90.6 0.093 6.8E-06 51.1 4.5 29 983-1011 32-60 (158)
134 d1fzqa_ c.37.1.8 (A:) ADP-ribo 90.5 0.37 2.7E-05 45.6 8.9 22 985-1006 17-38 (176)
135 d1ksha_ c.37.1.8 (A:) ADP-ribo 90.5 0.14 1E-05 48.2 5.8 22 986-1007 4-25 (165)
136 d1pzna2 c.37.1.11 (A:96-349) D 90.3 0.066 4.8E-06 53.7 3.3 24 985-1008 37-60 (254)
137 d1u8za_ c.37.1.8 (A:) Ras-rela 90.2 0.5 3.7E-05 44.8 9.6 23 985-1007 5-27 (168)
138 d1e0sa_ c.37.1.8 (A:) ADP-ribo 90.1 0.15 1.1E-05 48.7 5.6 22 985-1006 13-34 (173)
139 d2p6ra3 c.37.1.19 (A:1-202) He 90.1 0.76 5.5E-05 44.9 11.1 18 985-1002 41-58 (202)
140 d1um8a_ c.37.1.20 (A:) ClpX {H 90.1 0.13 9.4E-06 56.3 5.7 77 435-530 11-104 (364)
141 d1zj6a1 c.37.1.8 (A:2-178) ADP 90.0 0.31 2.3E-05 45.9 7.8 23 985-1007 16-38 (177)
142 d1v5wa_ c.37.1.11 (A:) Meiotic 89.7 0.11 8.3E-06 51.7 4.5 25 984-1008 37-61 (258)
143 d1sxja2 c.37.1.20 (A:295-547) 89.7 0.27 2E-05 49.4 7.4 76 452-531 12-89 (253)
144 d1ewqa2 c.37.1.12 (A:542-765) 89.5 0.72 5.3E-05 46.8 10.6 22 986-1007 37-58 (224)
145 d1uf9a_ c.37.1.1 (A:) Dephosph 89.5 0.096 7E-06 51.0 3.6 29 986-1015 5-33 (191)
146 d1njfa_ c.37.1.20 (A:) delta p 89.2 0.31 2.2E-05 49.3 7.5 56 689-747 99-155 (239)
147 d1kkma_ c.91.1.2 (A:) HPr kina 89.1 0.14 1E-05 50.6 4.6 33 984-1017 14-46 (176)
148 d1kaoa_ c.37.1.8 (A:) Rap2a {H 89.0 0.47 3.4E-05 44.7 8.2 22 986-1007 5-26 (167)
149 d2a5ja1 c.37.1.8 (A:9-181) Rab 88.8 0.27 1.9E-05 46.9 6.4 22 986-1007 5-26 (173)
150 d1yrba1 c.37.1.10 (A:1-244) AT 88.7 0.17 1.2E-05 50.4 4.9 29 987-1015 3-33 (244)
151 d1lw7a2 c.37.1.1 (A:220-411) T 88.2 0.1 7.4E-06 49.0 2.7 36 492-529 7-42 (192)
152 d1mkya1 c.37.1.8 (A:2-172) Pro 88.2 0.65 4.7E-05 43.8 8.7 21 986-1006 2-22 (171)
153 d2i1qa2 c.37.1.11 (A:65-322) D 88.1 0.12 8.8E-06 50.9 3.3 24 985-1008 35-58 (258)
154 d1ko7a2 c.91.1.2 (A:130-298) H 88.1 0.15 1.1E-05 50.0 4.0 30 984-1014 15-44 (169)
155 d1nn5a_ c.37.1.1 (A:) Thymidyl 88.0 0.2 1.4E-05 50.2 4.9 31 987-1017 6-39 (209)
156 d1kgda_ c.37.1.1 (A:) Guanylat 88.0 0.16 1.2E-05 49.6 4.2 24 985-1008 4-27 (178)
157 d1z2aa1 c.37.1.8 (A:8-171) Rab 87.9 0.48 3.5E-05 44.6 7.5 22 986-1007 4-25 (164)
158 d1z06a1 c.37.1.8 (A:32-196) Ra 87.9 1.1 8.1E-05 41.7 10.1 22 986-1007 4-25 (165)
159 d1wmsa_ c.37.1.8 (A:) Rab9a {H 87.8 0.41 3E-05 45.5 7.0 22 986-1007 8-29 (174)
160 d1gm5a3 c.37.1.19 (A:286-549) 87.7 0.95 6.9E-05 47.1 10.2 33 985-1017 105-140 (264)
161 d1gsia_ c.37.1.1 (A:) Thymidyl 87.6 0.24 1.8E-05 48.3 5.2 32 987-1018 3-37 (208)
162 d1pjra1 c.37.1.19 (A:1-318) DE 87.4 0.14 1E-05 53.4 3.6 24 985-1008 25-49 (318)
163 d1knxa2 c.91.1.2 (A:133-309) H 87.1 0.18 1.3E-05 49.8 3.9 32 984-1016 15-46 (177)
164 d2f7sa1 c.37.1.8 (A:5-190) Rab 86.9 1.6 0.00011 41.6 10.7 21 986-1006 7-27 (186)
165 d1uaaa1 c.37.1.19 (A:2-307) DE 86.7 0.16 1.2E-05 52.3 3.4 17 985-1001 15-31 (306)
166 d1vhta_ c.37.1.1 (A:) Dephosph 86.7 0.16 1.1E-05 50.6 3.2 28 987-1015 6-33 (208)
167 d1sq5a_ c.37.1.6 (A:) Pantothe 86.7 0.38 2.8E-05 51.4 6.5 39 982-1020 78-121 (308)
168 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 86.6 0.16 1.1E-05 47.9 3.0 23 983-1005 12-34 (186)
169 d1jjva_ c.37.1.1 (A:) Dephosph 86.5 0.14 1.1E-05 50.7 2.8 29 987-1016 5-33 (205)
170 d2qtvb1 c.37.1.8 (B:24-189) SA 85.8 0.21 1.5E-05 45.8 3.3 22 986-1007 2-23 (166)
171 d1s96a_ c.37.1.1 (A:) Guanylat 85.6 0.21 1.5E-05 50.1 3.4 24 986-1009 4-27 (205)
172 d1odfa_ c.37.1.6 (A:) Hypothet 85.5 0.64 4.6E-05 49.1 7.5 35 986-1020 29-69 (286)
173 d2vp4a1 c.37.1.1 (A:12-208) De 85.3 0.2 1.5E-05 48.5 3.1 29 985-1013 10-38 (197)
174 d1ky3a_ c.37.1.8 (A:) Rab-rela 85.2 1.3 9.2E-05 41.7 8.9 21 986-1006 4-24 (175)
175 d2p67a1 c.37.1.10 (A:1-327) LA 85.1 1.2 8.9E-05 47.6 9.7 35 984-1018 54-93 (327)
176 d2bmfa2 c.37.1.14 (A:178-482) 85.1 0.31 2.3E-05 50.1 4.7 17 983-999 8-24 (305)
177 d1upta_ c.37.1.8 (A:) ADP-ribo 85.0 0.25 1.8E-05 45.7 3.5 23 985-1007 6-28 (169)
178 d1veca_ c.37.1.19 (A:) DEAD bo 84.8 1 7.3E-05 44.6 8.2 15 985-999 41-55 (206)
179 d1ihua1 c.37.1.10 (A:1-296) Ar 84.7 0.46 3.4E-05 48.6 5.8 36 983-1018 7-45 (296)
180 d1azta2 c.37.1.8 (A:35-65,A:20 84.6 0.72 5.2E-05 46.0 7.1 35 985-1019 7-46 (221)
181 d1xzpa2 c.37.1.8 (A:212-371) T 84.3 1 7.5E-05 41.6 7.6 22 986-1007 2-23 (160)
182 d2b8ta1 c.37.1.24 (A:11-149) T 84.2 1.8 0.00013 40.5 9.4 30 988-1017 6-38 (139)
183 d2gjsa1 c.37.1.8 (A:91-258) Ra 84.1 1.2 9E-05 41.9 8.2 21 986-1006 3-23 (168)
184 d1e9ra_ c.37.1.11 (A:) Bacteri 84.1 0.34 2.5E-05 52.8 4.7 33 985-1017 51-86 (433)
185 d4tmka_ c.37.1.1 (A:) Thymidyl 83.7 0.36 2.6E-05 47.6 4.2 28 986-1013 4-34 (210)
186 d1byia_ c.37.1.10 (A:) Dethiob 83.4 0.46 3.3E-05 46.1 4.8 33 985-1017 2-38 (224)
187 d2ocpa1 c.37.1.1 (A:37-277) De 82.8 0.44 3.2E-05 47.5 4.5 29 984-1012 2-30 (241)
188 d1deka_ c.37.1.1 (A:) Deoxynuc 82.6 0.29 2.1E-05 49.1 3.1 29 986-1014 3-31 (241)
189 d1r6bx3 c.37.1.20 (X:437-751) 82.5 1 7.6E-05 47.6 7.7 71 435-530 16-88 (315)
190 d1i2ma_ c.37.1.8 (A:) Ran {Hum 82.5 0.7 5.1E-05 43.8 5.7 22 986-1007 5-26 (170)
191 d2fz4a1 c.37.1.19 (A:24-229) D 82.5 0.92 6.7E-05 44.8 6.8 31 986-1016 87-117 (206)
192 d1z0fa1 c.37.1.8 (A:8-173) Rab 81.5 0.39 2.8E-05 45.3 3.3 22 986-1007 6-27 (166)
193 d1zcba2 c.37.1.8 (A:47-75,A:20 81.3 0.89 6.4E-05 43.5 6.0 19 986-1004 4-22 (200)
194 d2qm8a1 c.37.1.10 (A:5-327) Me 81.3 1 7.6E-05 48.0 7.1 35 985-1019 52-91 (323)
195 d3raba_ c.37.1.8 (A:) Rab3a {R 80.1 0.46 3.3E-05 45.0 3.3 22 986-1007 7-28 (169)
196 d1r2qa_ c.37.1.8 (A:) Rab5a {H 79.7 0.48 3.5E-05 44.8 3.3 23 986-1008 8-30 (170)
197 d1tmka_ c.37.1.1 (A:) Thymidyl 79.6 0.72 5.3E-05 46.0 4.8 32 986-1017 5-36 (214)
198 d2ew1a1 c.37.1.8 (A:4-174) Rab 79.5 0.46 3.3E-05 45.0 3.1 22 986-1007 7-28 (171)
199 d2f9la1 c.37.1.8 (A:8-182) Rab 78.9 0.52 3.8E-05 44.9 3.3 22 986-1007 6-27 (175)
200 d2atva1 c.37.1.8 (A:5-172) Ras 78.7 0.54 3.9E-05 44.5 3.3 22 986-1007 4-25 (168)
201 d1z08a1 c.37.1.8 (A:17-183) Ra 78.5 0.55 4E-05 44.3 3.3 21 986-1006 5-25 (167)
202 d1gvnb_ c.37.1.21 (B:) Plasmid 78.2 0.29 2.1E-05 49.3 1.2 35 494-530 34-68 (273)
203 d2cxxa1 c.37.1.8 (A:2-185) GTP 77.9 0.53 3.9E-05 44.6 3.0 21 986-1006 2-22 (184)
204 d2erya1 c.37.1.8 (A:10-180) r- 77.9 0.55 4E-05 44.5 3.1 22 986-1007 7-28 (171)
205 d1sxjc2 c.37.1.20 (C:12-238) R 77.5 1.2 8.7E-05 43.8 5.7 93 646-746 38-138 (227)
206 d1sgwa_ c.37.1.12 (A:) Putativ 77.5 0.48 3.5E-05 47.2 2.6 24 985-1008 28-51 (200)
207 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 77.5 0.6 4.4E-05 44.7 3.3 22 986-1007 4-25 (184)
208 d2erxa1 c.37.1.8 (A:6-176) di- 77.4 0.52 3.8E-05 44.4 2.8 21 986-1006 4-24 (171)
209 d2fn4a1 c.37.1.8 (A:24-196) r- 77.1 0.59 4.3E-05 44.5 3.1 22 986-1007 8-29 (173)
210 d2g6ba1 c.37.1.8 (A:58-227) Ra 77.1 0.64 4.7E-05 43.9 3.3 22 986-1007 8-29 (170)
211 d1g16a_ c.37.1.8 (A:) Rab-rela 77.0 0.6 4.4E-05 43.8 3.1 22 986-1007 4-25 (166)
212 d2pmka1 c.37.1.12 (A:467-707) 77.0 0.53 3.9E-05 48.4 2.8 26 983-1008 28-53 (241)
213 d3b60a1 c.37.1.12 (A:329-581) 76.8 0.55 4E-05 48.6 3.0 26 983-1008 40-65 (253)
214 d1xtqa1 c.37.1.8 (A:3-169) GTP 76.8 0.62 4.5E-05 43.8 3.1 23 985-1007 5-27 (167)
215 d1yzqa1 c.37.1.8 (A:14-177) Ra 76.7 0.62 4.6E-05 43.6 3.1 21 986-1006 2-22 (164)
216 d1p5zb_ c.37.1.1 (B:) Deoxycyt 76.6 0.31 2.2E-05 48.4 0.8 25 985-1009 3-27 (241)
217 d1a7ja_ c.37.1.6 (A:) Phosphor 76.4 0.73 5.3E-05 48.7 3.8 35 986-1020 6-43 (288)
218 d1ihua2 c.37.1.10 (A:308-586) 76.4 1.1 7.9E-05 45.6 5.1 33 986-1018 22-57 (279)
219 d1moza_ c.37.1.8 (A:) ADP-ribo 76.3 0.67 4.9E-05 44.2 3.2 22 984-1005 17-38 (182)
220 d2bmea1 c.37.1.8 (A:6-179) Rab 76.3 0.65 4.7E-05 44.0 3.1 21 986-1006 7-27 (174)
221 d1mv5a_ c.37.1.12 (A:) Multidr 76.0 0.64 4.7E-05 47.8 3.1 26 983-1008 27-52 (242)
222 d1iqpa2 c.37.1.20 (A:2-232) Re 75.9 1 7.3E-05 44.6 4.6 42 703-747 108-149 (231)
223 d1l2ta_ c.37.1.12 (A:) MJ0796 75.9 0.67 4.9E-05 47.4 3.2 24 985-1008 32-55 (230)
224 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 75.9 0.71 5.2E-05 43.9 3.3 23 985-1007 3-25 (177)
225 d1r0wa_ c.37.1.12 (A:) Cystic 75.8 0.71 5.2E-05 48.5 3.5 26 983-1008 61-86 (281)
226 d1a5ta2 c.37.1.20 (A:1-207) de 75.8 3.1 0.00023 40.9 8.3 57 688-747 91-148 (207)
227 d2onka1 c.37.1.12 (A:1-240) Mo 75.7 0.66 4.8E-05 47.8 3.1 22 987-1008 27-48 (240)
228 d2awna2 c.37.1.12 (A:4-235) Ma 75.7 0.79 5.7E-05 46.9 3.7 24 985-1008 27-50 (232)
229 d1jj7a_ c.37.1.12 (A:) Peptide 75.7 0.67 4.9E-05 47.9 3.2 26 983-1008 39-64 (251)
230 d1g2912 c.37.1.12 (1:1-240) Ma 75.7 0.66 4.8E-05 47.7 3.1 24 985-1008 30-53 (240)
231 d1x3sa1 c.37.1.8 (A:2-178) Rab 75.5 0.74 5.4E-05 43.8 3.3 22 986-1007 9-30 (177)
232 d1z0ja1 c.37.1.8 (A:2-168) Rab 75.4 0.76 5.5E-05 43.2 3.3 22 986-1007 6-27 (167)
233 d1svia_ c.37.1.8 (A:) Probable 75.4 0.68 5E-05 44.6 3.0 22 985-1006 24-45 (195)
234 d1c1ya_ c.37.1.8 (A:) Rap1A {H 75.2 0.77 5.6E-05 43.2 3.3 22 986-1007 5-26 (167)
235 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 74.8 0.8 5.8E-05 43.1 3.3 22 986-1007 5-26 (170)
236 d3dhwc1 c.37.1.12 (C:1-240) Me 74.0 0.74 5.4E-05 47.4 3.0 24 985-1008 32-55 (240)
237 g1f2t.1 c.37.1.12 (A:,B:) Rad5 73.9 0.8 5.9E-05 46.0 3.3 22 987-1008 26-47 (292)
238 d1mh1a_ c.37.1.8 (A:) Rac {Hum 73.9 0.86 6.3E-05 43.6 3.3 22 986-1007 7-28 (183)
239 d3d31a2 c.37.1.12 (A:1-229) Su 73.7 0.81 5.9E-05 46.8 3.1 24 985-1008 27-50 (229)
240 d1v43a3 c.37.1.12 (A:7-245) Hy 73.2 0.98 7.2E-05 46.4 3.7 24 985-1008 33-56 (239)
241 d2g3ya1 c.37.1.8 (A:73-244) GT 73.0 0.88 6.4E-05 43.2 3.1 21 986-1006 5-25 (172)
242 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 73.0 3.1 0.00022 39.2 7.2 23 986-1008 4-26 (200)
243 d1x1ra1 c.37.1.8 (A:10-178) Ra 72.8 0.97 7.1E-05 42.7 3.4 23 985-1007 5-27 (169)
244 d1rkba_ c.37.1.1 (A:) Adenylat 72.7 0.77 5.6E-05 42.5 2.5 32 493-526 5-36 (173)
245 d2jdid3 c.37.1.11 (D:82-357) C 72.6 8.1 0.00059 40.1 10.9 24 985-1008 69-92 (276)
246 d2bcgy1 c.37.1.8 (Y:3-196) GTP 72.5 0.9 6.5E-05 44.0 3.1 22 986-1007 8-29 (194)
247 d1oxxk2 c.37.1.12 (K:1-242) Gl 72.2 0.77 5.6E-05 47.3 2.6 24 985-1008 32-55 (242)
248 d2bv3a2 c.37.1.8 (A:7-282) Elo 72.2 5.2 0.00038 41.6 9.2 25 985-1009 7-31 (276)
249 d1m7ba_ c.37.1.8 (A:) RhoE (RN 72.1 0.94 6.8E-05 43.4 3.1 22 986-1007 4-25 (179)
250 d1qhxa_ c.37.1.3 (A:) Chloramp 71.8 1.3 9.3E-05 40.9 3.9 34 492-527 3-36 (178)
251 d1b0ua_ c.37.1.12 (A:) ATP-bin 71.8 0.94 6.9E-05 46.9 3.2 24 985-1008 29-52 (258)
252 d1wp9a1 c.37.1.19 (A:1-200) pu 71.7 1.1 8E-05 43.1 3.5 31 986-1016 25-59 (200)
253 d1svsa1 c.37.1.8 (A:32-60,A:18 71.7 3.6 0.00027 38.5 7.3 22 986-1007 4-25 (195)
254 d2fu5c1 c.37.1.8 (C:3-175) Rab 71.7 0.61 4.5E-05 44.3 1.6 21 986-1006 8-28 (173)
255 d1cp2a_ c.37.1.10 (A:) Nitroge 71.5 1.6 0.00011 44.3 4.8 34 985-1018 2-38 (269)
256 d2atxa1 c.37.1.8 (A:9-193) Rho 71.0 1 7.4E-05 43.2 3.1 22 986-1007 11-32 (185)
257 d1qhla_ c.37.1.12 (A:) Cell di 70.9 0.39 2.9E-05 45.0 -0.1 22 987-1008 27-48 (222)
258 d2ngra_ c.37.1.8 (A:) CDC42 {H 70.5 1.1 7.7E-05 43.3 3.1 22 986-1007 5-26 (191)
259 d1egaa1 c.37.1.8 (A:4-182) GTP 69.9 1.1 8E-05 42.1 3.0 21 986-1006 7-27 (179)
260 d2hyda1 c.37.1.12 (A:324-578) 69.3 0.74 5.4E-05 47.7 1.7 26 983-1008 43-68 (255)
261 d1zp6a1 c.37.1.25 (A:6-181) Hy 69.1 1.1 8.2E-05 41.5 2.8 33 495-529 7-39 (176)
262 d2c78a3 c.37.1.8 (A:9-212) Elo 68.9 4.7 0.00035 39.5 7.7 25 983-1007 2-26 (204)
263 g1ii8.1 c.37.1.12 (A:,B:) Rad5 68.7 1.2 8.6E-05 45.2 3.1 23 986-1008 25-47 (369)
264 d2eyqa3 c.37.1.19 (A:546-778) 68.7 3.1 0.00023 42.3 6.3 32 985-1016 77-111 (233)
265 d1puia_ c.37.1.8 (A:) Probable 68.0 0.8 5.8E-05 42.9 1.5 21 985-1005 17-37 (188)
266 g1xew.1 c.37.1.12 (X:,Y:) Smc 67.5 1.1 7.7E-05 46.6 2.5 22 987-1008 29-50 (329)
267 d1mkya2 c.37.1.8 (A:173-358) P 67.4 1.5 0.00011 41.6 3.3 23 985-1007 9-31 (186)
268 d1kaga_ c.37.1.2 (A:) Shikimat 67.4 1.1 8.3E-05 40.4 2.4 30 493-524 3-32 (169)
269 d1udxa2 c.37.1.8 (A:157-336) O 67.2 1.1 7.8E-05 42.6 2.2 21 986-1006 3-23 (180)
270 d1ji0a_ c.37.1.12 (A:) Branche 66.8 1.2 8.6E-05 45.6 2.6 24 985-1008 33-56 (240)
271 d2dy1a2 c.37.1.8 (A:8-274) Elo 66.8 10 0.00075 38.9 10.1 24 985-1008 3-26 (267)
272 d1vioa2 d.66.1.5 (A:0-57) Pseu 66.5 1.5 0.00011 35.0 2.7 26 197-223 25-50 (58)
273 d1lnza2 c.37.1.8 (A:158-342) O 66.5 1.1 8.3E-05 42.5 2.3 20 986-1005 3-22 (185)
274 d1hyqa_ c.37.1.10 (A:) Cell di 65.8 5.9 0.00043 38.3 7.7 31 988-1018 6-39 (232)
275 d1vpla_ c.37.1.12 (A:) Putativ 64.0 1.7 0.00012 44.3 3.2 24 985-1008 29-52 (238)
276 d1wb1a4 c.37.1.8 (A:1-179) Elo 63.4 6.3 0.00046 37.2 7.1 21 986-1006 7-27 (179)
277 d1xx6a1 c.37.1.24 (A:2-142) Th 63.3 5.4 0.00039 37.3 6.4 30 987-1016 10-42 (141)
278 d1xbta1 c.37.1.24 (A:18-150) T 63.0 3.5 0.00026 38.1 5.0 31 987-1017 5-38 (133)
279 d1g6ha_ c.37.1.12 (A:) MJ1267 62.8 1.7 0.00012 44.8 2.8 24 985-1008 31-54 (254)
280 d2bmja1 c.37.1.8 (A:66-240) Ce 62.6 2.1 0.00015 40.9 3.4 25 984-1008 5-29 (175)
281 d1xpua3 c.37.1.11 (A:129-417) 62.5 2 0.00015 45.2 3.4 24 985-1008 44-67 (289)
282 d1u0la2 c.37.1.8 (A:69-293) Pr 62.3 2 0.00015 43.6 3.3 27 985-1011 96-122 (225)
283 d2afhe1 c.37.1.10 (E:1-289) Ni 62.3 3 0.00022 42.6 4.8 34 985-1018 3-39 (289)
284 d1sxjd2 c.37.1.20 (D:26-262) R 62.2 5.4 0.00039 38.8 6.6 41 703-746 107-147 (237)
285 d1p6xa_ c.37.1.1 (A:) Thymidin 62.1 2.3 0.00017 45.6 3.9 31 985-1015 7-39 (333)
286 d1dm9a_ d.66.1.3 (A:) Heat sho 61.3 2.1 0.00015 38.4 2.9 31 196-228 28-58 (104)
287 d1l7vc_ c.37.1.12 (C:) ABC tra 61.3 1.5 0.00011 44.5 2.0 22 985-1006 26-47 (231)
288 d2iyva1 c.37.1.2 (A:2-166) Shi 60.5 1.9 0.00014 40.4 2.6 30 492-523 1-30 (165)
289 d1sxje2 c.37.1.20 (E:4-255) Re 59.4 9.9 0.00072 37.1 8.1 43 704-749 131-173 (252)
290 d1w1wa_ c.37.1.12 (A:) Smc hea 58.5 2.5 0.00018 44.7 3.4 23 987-1009 28-50 (427)
291 d1t5la1 c.37.1.19 (A:2-414) Nu 56.7 7 0.00051 42.8 6.8 55 948-1017 10-64 (413)
292 d2g9na1 c.37.1.19 (A:21-238) I 56.2 2.1 0.00015 42.7 2.1 54 943-999 9-64 (218)
293 d1g3qa_ c.37.1.10 (A:) Cell di 56.1 5.1 0.00037 38.8 5.1 31 987-1017 5-39 (237)
294 d1nija1 c.37.1.10 (A:2-223) Hy 54.7 2.5 0.00019 42.2 2.5 23 986-1008 5-27 (222)
295 d1z63a1 c.37.1.19 (A:432-661) 54.1 4.3 0.00031 40.1 4.1 24 985-1008 32-55 (230)
296 d1gkub1 c.37.1.16 (B:1-250) He 53.3 3 0.00022 41.4 2.8 21 985-1005 59-79 (237)
297 d1knqa_ c.37.1.17 (A:) Glucona 53.2 3 0.00022 38.4 2.6 33 493-527 7-39 (171)
298 d2bdta1 c.37.1.25 (A:1-176) Hy 52.7 3.9 0.00028 37.2 3.3 28 493-522 3-30 (176)
299 d1t9ha2 c.37.1.8 (A:68-298) Pr 52.5 2 0.00014 43.8 1.2 26 985-1010 98-123 (231)
300 d1osna_ c.37.1.1 (A:) Thymidin 52.1 2.6 0.00019 45.0 2.2 31 986-1016 7-40 (331)
301 d1sxjb2 c.37.1.20 (B:7-230) Re 52.0 3.8 0.00028 40.1 3.3 33 494-528 38-75 (224)
302 d1e69a_ c.37.1.12 (A:) Smc hea 51.7 2.3 0.00017 43.5 1.6 22 987-1008 27-48 (308)
303 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 51.0 3.6 0.00026 46.0 3.3 23 985-1007 25-48 (623)
304 d1qdea_ c.37.1.19 (A:) Initiat 50.9 4.6 0.00033 39.9 3.7 54 943-999 7-62 (212)
305 d1m8pa3 c.37.1.15 (A:391-573) 50.5 2 0.00015 39.5 0.8 26 494-521 8-33 (183)
306 d1viaa_ c.37.1.2 (A:) Shikimat 48.9 3.7 0.00027 38.4 2.5 31 494-526 2-32 (161)
307 d1zina1 c.37.1.1 (A:1-125,A:16 48.0 4.2 0.0003 38.0 2.7 29 494-524 2-30 (182)
308 d1e2ka_ c.37.1.1 (A:) Thymidin 46.9 3.6 0.00026 43.9 2.3 25 986-1010 6-30 (329)
309 d1whha_ b.34.10.1 (A:) CLIP170 46.6 21 0.0015 31.6 7.1 60 596-673 23-90 (102)
310 d1v8ca1 d.15.3.1 (A:1-87) MoaD 46.3 4.7 0.00034 34.3 2.5 27 199-225 54-82 (87)
311 d1kska3 d.66.1.5 (A:1-59) Pseu 45.9 5.5 0.0004 31.6 2.7 26 197-223 24-49 (59)
312 d1e6ca_ c.37.1.2 (A:) Shikimat 45.5 4.9 0.00036 37.6 2.8 30 492-523 2-31 (170)
313 d1w5sa2 c.37.1.20 (A:7-293) CD 45.2 27 0.002 33.8 8.7 24 494-519 48-71 (287)
314 d1vjka_ d.15.3.1 (A:) Molybdop 44.9 5.6 0.00041 33.6 2.8 24 199-224 61-84 (88)
315 d1g8fa3 c.37.1.15 (A:390-511) 43.9 14 0.001 33.8 5.5 34 985-1018 7-45 (122)
316 d1x6va3 c.37.1.4 (A:34-228) Ad 43.7 2.7 0.0002 39.5 0.5 29 493-523 20-48 (195)
317 d1c06a_ d.66.1.2 (A:) Ribosoma 43.6 5.4 0.0004 38.2 2.7 29 197-226 75-103 (159)
318 d1zunb3 c.37.1.8 (B:16-237) Su 43.2 20 0.0015 35.4 7.3 26 984-1009 9-34 (222)
319 d1c4oa1 c.37.1.19 (A:2-409) Nu 43.1 14 0.001 40.1 6.5 50 953-1017 12-61 (408)
320 d1qvra3 c.37.1.20 (A:536-850) 43.0 6.1 0.00044 41.5 3.3 37 494-532 55-94 (315)
321 d1w36b1 c.37.1.19 (B:1-485) Ex 42.2 7.3 0.00053 41.6 3.9 23 986-1008 18-41 (485)
322 d1t6na_ c.37.1.19 (A:) Spliceo 40.9 4.9 0.00036 39.4 2.0 15 985-999 39-53 (207)
323 d1hv8a1 c.37.1.19 (A:3-210) Pu 40.7 8.3 0.0006 37.5 3.7 21 985-1005 43-63 (208)
324 d1j3ba1 c.91.1.1 (A:212-529) P 40.4 4.6 0.00033 42.9 1.8 18 985-1002 15-32 (318)
325 d1q0ua_ c.37.1.19 (A:) Probabl 40.2 3.7 0.00027 39.8 0.9 15 985-999 39-53 (209)
326 d1f60a3 c.37.1.8 (A:2-240) Elo 40.1 17 0.0013 36.3 6.2 27 982-1008 4-30 (239)
327 d1z3ix2 c.37.1.19 (X:92-389) R 39.7 16 0.0012 37.2 6.0 23 983-1005 78-100 (298)
328 d1whja_ b.34.10.1 (A:) Restin- 39.6 16 0.0011 32.4 5.0 61 595-673 21-89 (102)
329 d2gy9d1 d.66.1.2 (D:2-205) Rib 39.5 5.2 0.00038 39.9 1.9 30 196-226 117-146 (204)
330 d1rifa_ c.37.1.23 (A:) DNA hel 39.1 11 0.00082 38.6 4.7 41 951-1008 112-152 (282)
331 d1l8qa2 c.37.1.20 (A:77-289) C 39.1 27 0.002 34.0 7.4 58 449-520 5-62 (213)
332 d1fx0a3 c.37.1.11 (A:97-372) C 38.9 35 0.0026 34.9 8.5 24 985-1008 68-91 (276)
333 d1tq4a_ c.37.1.8 (A:) Interfer 38.9 7.2 0.00052 42.3 3.2 22 984-1005 56-77 (400)
334 d1goja_ c.37.1.9 (A:) Kinesin 38.3 4.5 0.00033 43.1 1.3 17 985-1001 81-97 (354)
335 d2j0sa1 c.37.1.19 (A:22-243) P 38.3 7.9 0.00058 38.5 3.2 52 945-999 16-69 (222)
336 d2olra1 c.91.1.1 (A:228-540) P 38.3 5.9 0.00043 41.9 2.2 17 986-1002 16-32 (313)
337 d1bg2a_ c.37.1.9 (A:) Kinesin 38.2 3.9 0.00028 43.1 0.7 17 985-1001 77-93 (323)
338 d2hqha1 b.34.10.1 (A:26-97) Dy 38.1 16 0.0011 30.5 4.4 30 642-672 31-66 (72)
339 d1oywa2 c.37.1.19 (A:1-206) Re 37.9 9.5 0.00069 36.5 3.6 23 985-1007 41-63 (206)
340 d1s2ma1 c.37.1.19 (A:46-251) P 37.0 5.3 0.00039 38.9 1.5 15 985-999 39-53 (206)
341 d1ni3a1 c.37.1.8 (A:11-306) Yc 36.4 9.3 0.00068 39.3 3.4 32 985-1016 11-47 (296)
342 d1fnna2 c.37.1.20 (A:1-276) CD 36.3 13 0.00097 36.0 4.5 28 490-519 41-68 (276)
343 d1lkxa_ c.37.1.9 (A:) Myosin S 36.1 9.3 0.00068 44.4 3.7 24 985-1008 87-110 (684)
344 d1d0xa2 c.37.1.9 (A:2-33,A:80- 35.9 9.4 0.00068 44.6 3.7 24 985-1008 126-149 (712)
345 d2eyqa3 c.37.1.19 (A:546-778) 35.3 13 0.00098 37.3 4.3 60 453-524 49-111 (233)
346 d1ry6a_ c.37.1.9 (A:) Kinesin 34.7 5.7 0.00042 41.8 1.4 17 985-1001 86-102 (330)
347 d1fm0d_ d.15.3.1 (D:) Molybdop 34.7 11 0.00084 31.4 3.1 24 199-224 52-75 (81)
348 d1ckea_ c.37.1.1 (A:) CMP kina 33.6 9.7 0.00071 36.2 2.8 36 492-531 3-38 (225)
349 d1ii2a1 c.91.1.1 (A:201-523) P 33.5 7.8 0.00057 41.1 2.2 18 985-1002 15-32 (323)
350 d1ukza_ c.37.1.1 (A:) Uridylat 33.3 11 0.00079 35.7 3.1 32 490-523 6-37 (196)
351 d2jdia3 c.37.1.11 (A:95-379) C 33.3 9.3 0.00068 39.8 2.7 23 985-1007 69-91 (285)
352 d1ak2a1 c.37.1.1 (A:14-146,A:1 33.2 12 0.00085 35.3 3.3 35 492-530 3-37 (190)
353 d1f9va_ c.37.1.9 (A:) Kinesin 33.0 19 0.0014 37.7 5.3 17 985-1001 84-100 (342)
354 d1puja_ c.37.1.8 (A:) Probable 33.0 22 0.0016 35.9 5.7 26 982-1007 110-135 (273)
355 d1br2a2 c.37.1.9 (A:80-789) My 32.5 13 0.00092 43.4 4.1 24 985-1008 92-115 (710)
356 d1zaka1 c.37.1.1 (A:3-127,A:15 32.4 8.3 0.0006 36.4 2.0 29 493-523 4-32 (189)
357 d1y63a_ c.37.1.1 (A:) Probable 32.3 14 0.001 33.5 3.7 28 491-520 4-31 (174)
358 d1jala1 c.37.1.8 (A:1-278) Ych 32.2 9.8 0.00071 38.7 2.7 29 986-1014 4-36 (278)
359 d3adka_ c.37.1.1 (A:) Adenylat 32.0 11 0.00081 35.7 2.9 35 492-530 8-42 (194)
360 d2mysa2 c.37.1.9 (A:4-33,A:80- 32.0 11 0.0008 44.5 3.4 24 985-1008 124-147 (794)
361 d1kk8a2 c.37.1.9 (A:1-28,A:77- 31.8 12 0.00086 44.2 3.7 24 985-1008 122-145 (789)
362 d2exda1 b.40.12.1 (A:72-143) H 30.8 19 0.0014 29.8 3.8 46 186-231 19-65 (72)
363 d2ak3a1 c.37.1.1 (A:0-124,A:16 30.4 13 0.00092 35.6 3.0 34 492-529 6-39 (189)
364 d1p9ka_ d.66.1.6 (A:) Hypothet 30.3 5.8 0.00042 33.6 0.4 26 197-223 45-70 (79)
365 d1bifa1 c.37.1.7 (A:37-249) 6- 30.0 15 0.0011 34.3 3.6 34 492-527 1-38 (213)
366 d1w7ja2 c.37.1.9 (A:63-792) My 29.9 14 0.001 43.2 3.8 24 985-1008 95-118 (730)
367 d2i3ba1 c.37.1.11 (A:1-189) Ca 29.6 11 0.0008 34.1 2.3 25 492-518 1-25 (189)
368 d2uubd1 d.66.1.2 (D:2-209) Rib 29.3 12 0.00089 37.2 2.7 30 196-226 121-150 (208)
369 d2gnoa2 c.37.1.20 (A:11-208) g 29.1 42 0.0031 32.2 6.8 57 689-748 63-120 (198)
370 d1x88a1 c.37.1.9 (A:18-362) Ki 28.8 6.1 0.00044 41.8 0.3 17 985-1001 82-98 (345)
371 d1g7sa4 c.37.1.8 (A:1-227) Ini 28.6 16 0.0012 35.8 3.5 22 987-1008 8-29 (227)
372 d1akya1 c.37.1.1 (A:3-130,A:16 28.1 14 0.001 34.6 2.8 32 492-525 2-33 (180)
373 d1v8ka_ c.37.1.9 (A:) Kinesin 27.6 5.7 0.00041 42.5 -0.2 17 985-1001 115-131 (362)
374 d1y9qa2 b.82.1.15 (A:83-181) P 27.4 35 0.0025 29.0 5.2 37 189-231 46-82 (99)
375 d1q3ta_ c.37.1.1 (A:) CMP kina 27.4 14 0.001 35.3 2.8 34 494-531 5-38 (223)
376 d1h3fa2 d.66.1.4 (A:352-432) T 27.1 28 0.002 29.1 4.3 32 198-230 43-74 (81)
377 d1sdma_ c.37.1.9 (A:) Kinesin 27.1 13 0.00098 39.4 2.8 17 985-1001 76-92 (364)
378 d1s3ga1 c.37.1.1 (A:1-125,A:16 26.7 15 0.0011 34.3 2.7 29 494-524 2-30 (182)
379 d1jnya3 c.37.1.8 (A:4-227) Elo 26.7 18 0.0013 35.4 3.5 27 983-1009 2-28 (224)
380 d2ogqa2 d.223.1.2 (A:507-593) 26.6 36 0.0026 29.0 5.0 31 196-228 20-51 (87)
381 d1rz3a_ c.37.1.6 (A:) Hypothet 26.5 8.3 0.0006 35.8 0.8 44 486-531 15-62 (198)
382 d1g5ta_ c.37.1.11 (A:) ATP:cor 26.4 2.2E+02 0.016 26.3 11.3 115 987-1117 5-152 (157)
383 d1e4va1 c.37.1.1 (A:1-121,A:15 25.6 15 0.0011 34.2 2.4 28 494-523 2-29 (179)
384 d2cdna1 c.37.1.1 (A:1-181) Ade 25.6 16 0.0012 34.0 2.7 28 494-523 2-29 (181)
385 d1d2ea3 c.37.1.8 (A:55-250) El 25.6 21 0.0015 34.5 3.7 25 983-1007 2-26 (196)
386 d1wxqa1 c.37.1.8 (A:1-319) GTP 24.9 16 0.0011 37.6 2.7 30 987-1016 3-36 (319)
387 d1xo3a_ d.15.3.3 (A:) C9orf74 24.7 12 0.0009 32.6 1.6 28 199-226 68-97 (101)
388 d1ixda_ b.34.10.1 (A:) Cylindr 24.1 88 0.0064 27.4 7.2 32 643-674 49-86 (104)
389 d1mb3a_ c.23.1.1 (A:) Cell div 23.8 1.8E+02 0.013 24.8 9.6 21 1114-1134 101-121 (123)
390 d2ncda_ c.37.1.9 (A:) Kinesin 23.4 17 0.0013 38.6 2.8 17 985-1001 126-142 (368)
391 d1r0ka2 c.2.1.3 (A:3-126,A:265 23.0 40 0.0029 31.5 5.0 58 984-1053 2-61 (150)
392 d1teva_ c.37.1.1 (A:) UMP/CMP 22.6 18 0.0013 33.9 2.4 33 493-529 2-34 (194)
393 d1c9ka_ c.37.1.11 (A:) Adenosy 22.3 21 0.0015 34.4 2.9 31 987-1018 2-32 (180)
394 d1gkya_ c.37.1.1 (A:) Guanylat 21.6 23 0.0017 33.4 3.0 32 493-526 2-33 (186)
395 d2qn6a3 c.37.1.8 (A:2-206) Ini 21.3 29 0.0021 33.2 3.7 26 981-1006 5-30 (205)
396 d1n0ua2 c.37.1.8 (A:3-343) Elo 21.2 22 0.0016 37.6 3.1 24 985-1008 18-41 (341)
397 d1qf9a_ c.37.1.1 (A:) UMP/CMP 20.9 21 0.0015 33.4 2.6 29 493-523 7-35 (194)
398 d1h75a_ c.47.1.1 (A:) Glutared 20.4 1.2E+02 0.0088 24.0 7.1 34 986-1019 2-35 (76)
399 d1g2914 b.40.6.3 (1:302-372) M 20.2 58 0.0043 25.8 4.9 55 174-235 9-64 (71)
No 1
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=3.4e-35 Score=319.62 Aligned_cols=218 Identities=39% Similarity=0.619 Sum_probs=193.4
Q ss_pred CCCCCCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecccc
Q 001076 941 PSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 1020 (1163)
Q Consensus 941 ~~e~~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL 1020 (1163)
++++.++|+||+|+++++++|.+.+.+ +.+++.|.+.+.. +++++||+||||||||++|++||++++.+++.++++++
T Consensus 4 ~~~~~~t~~Di~Gl~~~k~~l~e~v~~-~~~~~~~~~~g~~-~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l 81 (256)
T d1lv7a_ 4 EDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGK-IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDF 81 (256)
T ss_dssp ECSSCCCGGGSCSCHHHHHHTHHHHHH-HHCGGGC-----C-CCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSS
T ss_pred CCCCCCCHHHHhchHHHHHHHHHHHHH-HHCHHHHHHcCCC-CCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHHh
Confidence 456688999999999999999998865 7788888876644 45899999999999999999999999999999999999
Q ss_pred ccccccchHHHHHHHHHHHhccCCeEEEEccccccccCCCCc--chHHHHHHHHHHHHHHhcCCcccCCCCEEEEEEeCC
Q 001076 1021 TSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP--GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNR 1098 (1163)
Q Consensus 1021 ~s~~~Ge~E~~Ir~lF~~A~k~~PsILfIDEID~L~g~r~s~--~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~ 1098 (1163)
.+.|+|++++.++.+|..|+++.|+||||||||.++..+... .......+++++|+..++++.. +.+|+||||||.
T Consensus 82 ~~~~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~--~~~v~vIatTn~ 159 (256)
T d1lv7a_ 82 VEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEG--NEGIIVIAATNR 159 (256)
T ss_dssp TTSCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCS--SSCEEEEEEESC
T ss_pred hhcchhHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCC--CCCEEEEEeCCC
Confidence 999999999999999999999999999999999998766432 2334556788999999998754 467999999999
Q ss_pred CCCCCHHHHh--ccCcEEEecCCCHHHHHHHHHHHHhhCCCCChhhHHHHHHHcCCCCHHHHHhhc
Q 001076 1099 PFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKVDY 1162 (1163)
Q Consensus 1099 p~~Ld~aLlr--RFd~vI~I~~Pd~eeR~eILk~ll~k~~l~~dvdl~~LA~~TeGySgaDLk~Lv 1162 (1163)
++.||++++| ||++.|+|++|+.++|.+||+.++.+..+..++++..|++.|+||+++||+.+|
T Consensus 160 ~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adi~~l~ 225 (256)
T d1lv7a_ 160 PDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLV 225 (256)
T ss_dssp TTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHH
T ss_pred cccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCcCcccCHHHHHHhCCCCCHHHHHHHH
Confidence 9999999998 999999999999999999999999999888999999999999999999999887
No 2
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=8.7e-35 Score=314.75 Aligned_cols=215 Identities=39% Similarity=0.604 Sum_probs=191.7
Q ss_pred CCCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEeccccccc
Q 001076 944 IGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSK 1023 (1163)
Q Consensus 944 ~~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~s~ 1023 (1163)
+.++|+||+|++++++.|.+.+. ++.+++.|.+.+.. ++++|||+||||||||+||++||++++++++.++++++.+.
T Consensus 4 p~~~~~di~G~~~~k~~l~~~i~-~l~~~~~~~~~g~~-~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~~ 81 (247)
T d1ixza_ 4 PKVTFKDVAGAEEAKEELKEIVE-FLKNPSRFHEMGAR-IPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEM 81 (247)
T ss_dssp CSCCGGGCCSCHHHHHHHHHHHH-HHHCHHHHHHTTCC-CCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHHS
T ss_pred CCCcHHHHccHHHHHHHHHHHHH-HHHCHHHHHHcCCC-CCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEhHHhhhc
Confidence 46899999999999999998776 48889999887744 55899999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHhccCCeEEEEccccccccCCCCc--chHHHHHHHHHHHHHHhcCCcccCCCCEEEEEEeCCCCC
Q 001076 1024 WFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP--GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFD 1101 (1163)
Q Consensus 1024 ~~Ge~E~~Ir~lF~~A~k~~PsILfIDEID~L~g~r~s~--~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~ 1101 (1163)
|+|++++.++.+|..|+.++|+||||||||.+++.+... ........++++|+..|+++.. +.+|+||+|||.++.
T Consensus 82 ~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~--~~~vivi~tTn~~~~ 159 (247)
T d1ixza_ 82 FVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEK--DTAIVVMAATNRPDI 159 (247)
T ss_dssp CTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCT--TCCEEEEEEESCGGG
T ss_pred cccHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCC--CCCEEEEEeCCCccc
Confidence 999999999999999999999999999999998776442 2334566788999999998753 468999999999999
Q ss_pred CCHHHHh--ccCcEEEecCCCHHHHHHHHHHHHhhCCCCChhhHHHHHHHcCCCCHHHHHhhc
Q 001076 1102 LDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKVDY 1162 (1163)
Q Consensus 1102 Ld~aLlr--RFd~vI~I~~Pd~eeR~eILk~ll~k~~l~~dvdl~~LA~~TeGySgaDLk~Lv 1162 (1163)
||++++| ||+.+|+|++|+.++|.+||+.++.+.....+.++..||+.|+||+|+||+.+|
T Consensus 160 ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~di~~lv 222 (247)
T d1ixza_ 160 LDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLL 222 (247)
T ss_dssp SCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHH
T ss_pred cCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCCccccCHHHHHHHCCCCCHHHHHHHH
Confidence 9999997 999999999999999999999999998888999999999999999999999886
No 3
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=2e-34 Score=313.16 Aligned_cols=213 Identities=41% Similarity=0.681 Sum_probs=193.3
Q ss_pred CCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEeccccccccc
Q 001076 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWF 1025 (1163)
Q Consensus 946 ~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~s~~~ 1025 (1163)
++|+||+|++++++.|++.+..|+.+++.|.+.++. +++++|||||||||||++|+++|++++.+|+.++++.+.+.+.
T Consensus 1 ~~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~-~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~~~ 79 (258)
T d1e32a2 1 VGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVK-PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLA 79 (258)
T ss_dssp CCGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCC-CCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTSCT
T ss_pred CChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCC-CCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEchhhccccc
Confidence 479999999999999999999999999999988755 5689999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHhccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccCCCCEEEEEEeCCCCCCCHH
Q 001076 1026 GEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEA 1105 (1163)
Q Consensus 1026 Ge~E~~Ir~lF~~A~k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~a 1105 (1163)
|..+..++.+|..|++++|+||||||+|.+++++... ..+..+.+++.++..+++.. .+.+|+||+|||.++.+|++
T Consensus 80 g~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~-~~~~~~~~~~~~~~~~~~~~--~~~~vlvi~tTn~~~~ld~a 156 (258)
T d1e32a2 80 GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-HGEVERRIVSQLLTLMDGLK--QRAHVIVMAATNRPNSIDPA 156 (258)
T ss_dssp THHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHC-CCTTHHHHHHHHHHHHHTCC--CSSCEEEEEEESCGGGSCGG
T ss_pred ccHHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCC-CCchHHHHHHHhcccccccc--ccCCccEEEeCCCccccchh
Confidence 9999999999999999999999999999998665332 22334567777887777664 34679999999999999999
Q ss_pred HHh--ccCcEEEecCCCHHHHHHHHHHHHhhCCCCChhhHHHHHHHcCCCCHHHHHhhc
Q 001076 1106 VVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKVDY 1162 (1163)
Q Consensus 1106 Llr--RFd~vI~I~~Pd~eeR~eILk~ll~k~~l~~dvdl~~LA~~TeGySgaDLk~Lv 1162 (1163)
++| ||++.|+|++|+.++|.+||+.++.+..+..++++..||++|+||||+||+.+|
T Consensus 157 l~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adl~~lv 215 (258)
T d1e32a2 157 LRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALC 215 (258)
T ss_dssp GTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBCTTCCHHHHHHHCTTCCHHHHHHHH
T ss_pred hhhcccccceeECCCCCHHHHHHHhhhhccCcccccccchhhhhhcccCCCHHHHHHHH
Confidence 999 999999999999999999999999998888889999999999999999999886
No 4
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.98 E-value=3e-33 Score=305.22 Aligned_cols=215 Identities=44% Similarity=0.731 Sum_probs=188.2
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecccccccc
Q 001076 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKW 1024 (1163)
Q Consensus 945 ~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~s~~ 1024 (1163)
..+|+||+|+++++++|.+.+..|+.+++.|.+.++. ++++|||+||||||||+||+++|.+++.+|+.++++++.+.+
T Consensus 3 ~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~-~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~~ 81 (265)
T d1r7ra3 3 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMT-PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 81 (265)
T ss_dssp CCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCC-CCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTSC
T ss_pred CCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCC-CCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHhhhcc
Confidence 5799999999999999999999999999999988754 558999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHhccCCeEEEEccccccccCCCC--cchHHHHHHHHHHHHHHhcCCcccCCCCEEEEEEeCCCCCC
Q 001076 1025 FGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN--PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDL 1102 (1163)
Q Consensus 1025 ~Ge~E~~Ir~lF~~A~k~~PsILfIDEID~L~g~r~s--~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~L 1102 (1163)
.|..+..++.+|..|+.+.|+||||||||.++..+.. ........++++.|+..++++..+ .+++||||||.++.|
T Consensus 82 ~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~--~~v~vi~ttn~~~~l 159 (265)
T d1r7ra3 82 FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK--KNVFIIGATNRPDII 159 (265)
T ss_dssp TTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC--------CCEEEECCBSCTTT
T ss_pred ccchHHHHHHHHHHHHhcCCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCC--CCEEEEEeCCCchhC
Confidence 9999999999999999999999999999999865421 222344566889999999887543 579999999999999
Q ss_pred CHHHHh--ccCcEEEecCCCHHHHHHHHHHHHhhCCCCChhhHHHHHHHcCCCCHHHHHhhc
Q 001076 1103 DEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKVDY 1162 (1163)
Q Consensus 1103 d~aLlr--RFd~vI~I~~Pd~eeR~eILk~ll~k~~l~~dvdl~~LA~~TeGySgaDLk~Lv 1162 (1163)
|++++| ||+.+|+|+.|+.++|.+||+.++.+.....++++..||++|+||+++||..+|
T Consensus 160 d~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~~~~~~l~~la~~t~g~s~~di~~lv 221 (265)
T d1r7ra3 160 DPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEIC 221 (265)
T ss_dssp SCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC----CCCCHHHHHHHCSSCCHHHHHHH
T ss_pred CHHHhCCCCccEEEEecchHHHHHHHHHHHHhccCCchhhhhHHHHHhcCCCCCHHHHHHHH
Confidence 999998 999999999999999999999999888778889999999999999999999886
No 5
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.87 E-value=6.5e-23 Score=220.86 Aligned_cols=168 Identities=23% Similarity=0.298 Sum_probs=133.9
Q ss_pred CCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEeccccccccccch-HHHHHHHHHHHhccCCeEEEEccccccccCC
Q 001076 981 TKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEG-EKYVKAVFSLASKIAPSVVFVDEVDSMLGRR 1059 (1163)
Q Consensus 981 ~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~s~~~Ge~-E~~Ir~lF~~A~k~~PsILfIDEID~L~g~r 1059 (1163)
..|+++|||+||||||||++|++||++++++|+.+++++++..+.+.. .+.++++|..|++.+|+||||||||.+++.+
T Consensus 37 ~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~ 116 (246)
T d1d2na_ 37 RTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYV 116 (246)
T ss_dssp SCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCCHHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCB
T ss_pred CCCCeEEEEECcCCCCHHHHHHHHhhcccccccccccccccccccccchhhhhhhhhhhhhhcccceeehhhhhhHhhhc
Confidence 456789999999999999999999999999999999998776665544 4679999999999999999999999998655
Q ss_pred CCcchHHHHHHHHHHHHHHhcCCcccCCCCEEEEEEeCCCCCCCHH-HHhccCcEEEecCCCHHHHHHHHHHHHhhCCCC
Q 001076 1060 ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEA-VVRRLPRRLMVNLPDAPNREKIIRVILAKEELA 1138 (1163)
Q Consensus 1060 ~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~a-LlrRFd~vI~I~~Pd~eeR~eILk~ll~k~~l~ 1138 (1163)
... ....+.+++.++..+++... ...+|+||||||.++.+++. +.+||+..|++ |+..+|.+|++.+... ...
T Consensus 117 ~~~--~~~~~~~~~~ll~~l~~~~~-~~~~v~vi~tTn~~~~ld~~~~~~rF~~~i~~--P~~~~r~~il~~l~~~-~~~ 190 (246)
T d1d2na_ 117 PIG--PRFSNLVLQALLVLLKKAPP-QGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHV--PNIATGEQLLEALELL-GNF 190 (246)
T ss_dssp TTT--TBCCHHHHHHHHHHTTCCCS-TTCEEEEEEEESCHHHHHHTTCTTTSSEEEEC--CCEEEHHHHHHHHHHH-TCS
T ss_pred ccc--cchhHHHHHHHHHHhcCCCc-cccceeeeeccCChhhccchhhcCccceEEec--CCchhHHHHHHHHHhc-cCC
Confidence 331 11224677888888888754 34689999999999999875 56799987776 6666677777655433 335
Q ss_pred ChhhHHHHHHHcCCCC
Q 001076 1139 SDVDLEGIANMADGYS 1154 (1163)
Q Consensus 1139 ~dvdl~~LA~~TeGyS 1154 (1163)
.+.++..+++.+.|+.
T Consensus 191 ~~~~~~~i~~~~~g~~ 206 (246)
T d1d2na_ 191 KDKERTTIAQQVKGKK 206 (246)
T ss_dssp CHHHHHHHHHHHTTSE
T ss_pred ChHHHHHHHHHcCCCc
Confidence 6778899999999865
No 6
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.84 E-value=2e-21 Score=215.47 Aligned_cols=180 Identities=24% Similarity=0.330 Sum_probs=145.6
Q ss_pred ccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEeccccc--cccccch
Q 001076 951 IGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT--SKWFGEG 1028 (1163)
Q Consensus 951 I~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~--s~~~Ge~ 1028 (1163)
|+||+++++.+...+..++.+..+........|+.++||+||||||||+||++||+.++.+|+.++++++. +.|.|..
T Consensus 16 ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~~~~~~~~~ 95 (309)
T d1ofha_ 16 IIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEV 95 (309)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSSCCSGGGST
T ss_pred ccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccccchhcccccccccceeEeeec
Confidence 67999999999998865544443332222234678999999999999999999999999999999999997 4588999
Q ss_pred HHHHHHHHHHHhcc-----CCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccC------CCCEEEEEE--
Q 001076 1029 EKYVKAVFSLASKI-----APSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKD------KERVLVLAA-- 1095 (1163)
Q Consensus 1029 E~~Ir~lF~~A~k~-----~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~------~~~VlVIaT-- 1095 (1163)
+..++.+|..|... +|+||||||||.+.+.+.....+.....+++.|+..+++..... ..++++|++
T Consensus 96 ~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~~~~~~~~gv~~~LL~~~dg~~~~~~~~~i~~s~ilfi~~ga 175 (309)
T d1ofha_ 96 DSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGA 175 (309)
T ss_dssp THHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEEC
T ss_pred cccccccchhhhcccccccCCceEEehhhhhhhhhccCcccchhhhHHHHHhhHHhcCCEEecCCeEEEccceeEEeccc
Confidence 99999999988653 58999999999998766655554455567888999998854321 235777877
Q ss_pred --eCCCCCCCHHHHhccCcEEEecCCCHHHHHHHHHH
Q 001076 1096 --TNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRV 1130 (1163)
Q Consensus 1096 --TN~p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ 1130 (1163)
++.+..++++++.||+.++.+..|+..++.+|++.
T Consensus 176 ~~~~~~~~~~p~l~~R~~~~i~~~~~~~~~~~~Il~~ 212 (309)
T d1ofha_ 176 FQVARPSDLIPELQGRLPIRVELTALSAADFERILTE 212 (309)
T ss_dssp CSSSCGGGSCHHHHHTCCEEEECCCCCHHHHHHHHHS
T ss_pred hhhcCcccchhhhhhhhheeeeccCCCHHHHHHHHHH
Confidence 46788999999999999999999999999999754
No 7
>d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3.4e-21 Score=185.09 Aligned_cols=106 Identities=25% Similarity=0.402 Sum_probs=98.3
Q ss_pred ccceeccccCCCCceeeecceeEEccCCccceeecCC---------CCCccceEEEEee-cCCcceEEEEEecCCceEEE
Q 001076 133 PWARLISQCSQNSHLSMTGAVFTVGHNRQCDLYLKDP---------SISKNLCRLRRIE-NGGPSGALLEITGGKGEVEV 202 (1163)
Q Consensus 133 pW~rL~s~~~~~p~~~i~~~~~t~G~~~~cd~~l~d~---------~~s~~~c~l~~~~-~~g~~~a~le~~~~~G~v~v 202 (1163)
|||||+++..++|++++.+..|+|||+..||+.|+++ .||..||+|.+.. .++..+++|++.|+||| +|
T Consensus 1 PwgrL~~~~~~~~~~~L~~~~~~iGR~~~cdi~l~~~~~~~~~~~~~ISr~H~~I~~~~~~~~~~~~~i~d~S~NGT-~v 79 (116)
T d1gxca_ 1 PWARLWALQDGFANLECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGT-FV 79 (116)
T ss_dssp CCEEEEECSTTCCCEEECSSEEEEESSTTCSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEECCSSCE-EE
T ss_pred CeEEEEecCCCCceEEeCCCCEEeeeCCCCCeEecCCccccccccceEecceEEEEEecccCCCCEEEEECCCccCc-eE
Confidence 8999999999999999999999999999999999997 6899999998764 34556799999999999 69
Q ss_pred cCeecCCCceEEeeCCCEEEEccCCCeeEEeeecCcc
Q 001076 203 NGNVHPKDSQVVLRGGDELVFSPSGKHSYIFQQLSDD 239 (1163)
Q Consensus 203 Ng~~~~k~~~~~L~~gDev~f~~~~~~ayifq~l~~~ 239 (1163)
||+++.|+..++|++||+|.|+....++|+|+||..|
T Consensus 80 N~~~i~~~~~~~L~~gD~I~ig~~~~~~f~f~d~~~~ 116 (116)
T d1gxca_ 80 NTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVD 116 (116)
T ss_dssp TTEECCTTCEEECCTTEEEEESSTTCEEEEEEETTCC
T ss_pred CCEEcCCCCEEECCCCCEEEECCCEeEEEEEEEccCC
Confidence 9999999999999999999999999999999998653
No 8
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.82 E-value=6.7e-22 Score=220.14 Aligned_cols=159 Identities=14% Similarity=0.229 Sum_probs=124.2
Q ss_pred CChhhhhcCCCCCCCce-EEEEcCCCChHHHHHHHHHHHhC--CcEEEEeccccccccccchHHHHHHHHHHHhccCCeE
Q 001076 970 QRPELFCKGQLTKPCKG-ILLFGPPGTGKTMLAKAVATEAG--ANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSV 1046 (1163)
Q Consensus 970 ~~pelf~k~~l~~p~kg-VLL~GPPGTGKT~LArALA~eLg--~pfi~Id~seL~s~~~Ge~E~~Ir~lF~~A~k~~PsI 1046 (1163)
..|..+...+.. ++++ +||+||||||||.||++||.+++ .+|+.+++++++++|.|+.++.++.+|..|+. |+|
T Consensus 109 ~~~~~~~~~~~~-~~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~--~~i 185 (321)
T d1w44a_ 109 CSPVVAEFGGHR-YASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQ--HRV 185 (321)
T ss_dssp BCCEEEEETTEE-EESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHH--CSE
T ss_pred cchHHHHHhhcc-cCCceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhhcccchHHHHHHHHHHHHhh--ccE
Confidence 345555554433 3456 55689999999999999999985 78999999999999999999999999999985 789
Q ss_pred EEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccCCCCEEEEEEeCCCCCCCHHH----Hh--ccCcEEEecCCC
Q 001076 1047 VFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAV----VR--RLPRRLMVNLPD 1120 (1163)
Q Consensus 1047 LfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~aL----lr--RFd~vI~I~~Pd 1120 (1163)
|||||||.+.+.+..........+++++++..||++... .+|+|||||| |+.+++++ +| ||++.+.+..|+
T Consensus 186 lf~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~~--~~v~viaatN-~~~~~~~i~~~~~r~~Rf~~~v~v~~pd 262 (321)
T d1w44a_ 186 IVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAAS--RGCVVIASLN-PTSNDDKIVELVKEASRSNSTSLVISTD 262 (321)
T ss_dssp EEEECCTTTC-----------CCHHHHHHHHHHHHHHHH--HTCEEEEECC-CCCCCHHHHHHHHHHHHHSCSEEEEECS
T ss_pred EEeehhhhhccccccCCCCCcchhhhhhhhhhccccccC--CCeEEEEeCC-CcccccchhhhhhccCcccceeecCCCC
Confidence 999999999988866555555567899999999998654 5799999999 56565544 45 999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 001076 1121 APNREKIIRVILAK 1134 (1163)
Q Consensus 1121 ~eeR~eILk~ll~k 1134 (1163)
.+.|.+|++.+...
T Consensus 263 ~~~r~~il~~~~~~ 276 (321)
T d1w44a_ 263 VDGEWQVLTRTGEG 276 (321)
T ss_dssp STTEEEEEEECBTT
T ss_pred hHHHHHHHHHhccC
Confidence 99999998776544
No 9
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.75 E-value=1.1e-18 Score=188.72 Aligned_cols=216 Identities=19% Similarity=0.278 Sum_probs=156.5
Q ss_pred CCccccccccccccccchhHHHHHHHhhhhhhcccc-cccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001076 445 GPENIEVSFESFPYYLSDITKNVLIASTYVHLKCNN-FAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1163)
Q Consensus 445 ~~~~~~vsf~~FPYylse~Tk~~L~~~~~~hLk~~~-~~k~~~~l~~~s~rILLsgpagsE~Yqe~LaKALA~~f~a~LL 523 (1163)
....++|||++ -+..|++|..|..... .++|++ |.+++.. .++.|||.||+| --.-+||||||+.++.+++
T Consensus 3 ~~~~~~~t~~D--i~Gl~~~k~~l~e~v~-~~~~~~~~~~~g~~---~~~~iLL~GppG--tGKT~la~~iA~~~~~~~~ 74 (256)
T d1lv7a_ 3 TEDQIKTTFAD--VAGCDEAKEEVAELVE-YLREPSRFQKLGGK---IPKGVLMVGPPG--TGKTLLAKAIAGEAKVPFF 74 (256)
T ss_dssp EECSSCCCGGG--SCSCHHHHHHTHHHHH-HHHCGGGC-----C---CCCEEEEECCTT--SCHHHHHHHHHHHHTCCEE
T ss_pred CCCCCCCCHHH--HhchHHHHHHHHHHHH-HHHCHHHHHHcCCC---CCCeEEeeCCCC--CCccHHHHHHHHHcCCCEE
Confidence 45678999999 7999999999988654 477755 3344333 346699999999 5789999999999999998
Q ss_pred EEeccCCCCCCCccccccccchhhhhhhHHHHHHHhhhccCCCCccccccccccccccCCCCCCCccccccCCcccccCC
Q 001076 524 IVDSLLLPGGSSKEADSVKESSRTEKASMFAKRAALLQHRKPTSSVEADITGGTAVGSQALPKPEISTASSKNYTFKKGD 603 (1163)
Q Consensus 524 ilDs~~~~g~~~~e~~~~~~~~~~e~~s~~~k~s~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd 603 (1163)
.++.+.+.+
T Consensus 75 ~i~~~~l~~----------------------------------------------------------------------- 83 (256)
T d1lv7a_ 75 TISGSDFVE----------------------------------------------------------------------- 83 (256)
T ss_dssp EECSCSSTT-----------------------------------------------------------------------
T ss_pred EEEhHHhhh-----------------------------------------------------------------------
Confidence 887644321
Q ss_pred ceeeeccCCCCcccCCCCCCCCCcccCeeeeccccCCCCceeeeecCCCCCCCCCCCCCCCCCCcccccccccccCCCcc
Q 001076 604 RVKFVGNVTSGTTVQPTLRGPGIGFRGRVILPFEDNDFSKIGVRFDRSIPEGNNLGGFCEDDHGFFCTASSLRLDSSLGD 683 (1163)
Q Consensus 604 rvk~~g~~~~~~~~~~~~~~p~~g~rg~v~~~~e~n~~~kvgV~Fd~~~~~~~~l~~~c~~~~~ff~~~~~~~~d~s~~~ 683 (1163)
+|.
T Consensus 84 -----------------------------------------------------------------------------~~~ 86 (256)
T d1lv7a_ 84 -----------------------------------------------------------------------------MFV 86 (256)
T ss_dssp -----------------------------------------------------------------------------SCC
T ss_pred -----------------------------------------------------------------------------cch
Confidence 233
Q ss_pred hhhHHHHHHHHHHHHhhccCCCeEEEEcchhhhhcC-------ChhhHHHHHHHH----hcC--CCCEEEEEeccccccc
Q 001076 684 EVDKLAINELFEVALNESKSSPLIVFVKDIEKSLTG-------NNDAYGALKSKL----ENL--PSNVVVIGSHTQLDSR 750 (1163)
Q Consensus 684 ~~~~~~l~~l~evl~~e~k~~P~IIffddid~~La~-------~~~~~~~i~s~L----~~L--~g~VivIgs~~~~d~~ 750 (1163)
++.+..|+.+|+.+.+ ++|+||||||||.++.. ..+....+++.| +.+ ..+|+|||+||+++.
T Consensus 87 g~~~~~l~~~f~~A~~---~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~v~vIatTn~~~~- 162 (256)
T d1lv7a_ 87 GVGASRVRDMFEQAKK---AAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDV- 162 (256)
T ss_dssp CCCHHHHHHHHHHHHT---TCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSCEEEEEEESCTTT-
T ss_pred hHHHHHHHHHHHHHHH---cCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCccc-
Confidence 3344567788887755 99999999999996552 123333444443 333 348999999997655
Q ss_pred cccCCCCCceeeccCCchhhhccccCCCCccccccccccchHHHHHhhhccccceeecCCchhHHHH--HHHHHHHHhhh
Q 001076 751 KEKSHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVE 828 (1163)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~lldp~~pd~~~~~~~r~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferq~e~~Lp 828 (1163)
||| |++| ||++++++++|
T Consensus 163 ---------------------ld~---------------------------------------al~R~gRfd~~i~i~~P 182 (256)
T d1lv7a_ 163 ---------------------LDP---------------------------------------ALLRPGRFDRQVVVGLP 182 (256)
T ss_dssp ---------------------SCG---------------------------------------GGGSTTSSCEEEECCCC
T ss_pred ---------------------CCH---------------------------------------hHcCCCCCCEEEECCCc
Confidence 444 5555 66667777777
Q ss_pred hhhccchhhHHHhhhhcCCC-CcccccchhhcccCCchhhhhhHHhHHhhhhhhh
Q 001076 829 TLKGQSNIISIRSVLSRNGL-DCVDLESLCIKDQTLTTEGVEKIVGWALSHHFMH 882 (1163)
Q Consensus 829 dlkgR~~Il~IHT~l~~~~L-~~vdLeeLa~~tkg~sgadIe~Lv~~Aas~Al~r 882 (1163)
+.+.|..|++.+.. .-++ .++++..|+..|.||+++||+.+|++|+..++.+
T Consensus 183 ~~~~R~~il~~~l~--~~~~~~~~~~~~la~~t~G~s~adi~~l~~~A~~~a~~~ 235 (256)
T d1lv7a_ 183 DVRGREQILKVHMR--RVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARG 235 (256)
T ss_dssp CHHHHHHHHHHHHT--TSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhcc--CCCcCcccCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHc
Confidence 77777777777643 3333 6789999999999999999999999999888754
No 10
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=8.4e-19 Score=189.41 Aligned_cols=241 Identities=17% Similarity=0.218 Sum_probs=170.4
Q ss_pred ccccccccccchhHHHHHHHhhhhhhcccccc-cccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccC
Q 001076 451 VSFESFPYYLSDITKNVLIASTYVHLKCNNFA-KYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1163)
Q Consensus 451 vsf~~FPYylse~Tk~~L~~~~~~hLk~~~~~-k~~~~l~~~s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1163)
|+||+ -.--|++|.-|...-...|+++++- +++.. ..+.|||.||+|| -.-+||||+|++++++++.++.+.
T Consensus 1 ~~~~d--v~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~---~~~giLL~GppGt--GKT~l~~ala~~~~~~~~~i~~~~ 73 (258)
T d1e32a2 1 VGYDD--VGGCRKQLAQIKEMVELPLRHPALFKAIGVK---PPRGILLYGPPGT--GKTLIARAVANETGAFFFLINGPE 73 (258)
T ss_dssp CCGGG--CCSCSHHHHHHHHHHHHHHHCHHHHHHCCCC---CCCEEEEECCTTS--SHHHHHHHHHHHTTCEEEEECHHH
T ss_pred CChhh--hccHHHHHHHHHHHHHHHhcCHHHHHhCCCC---CCceeEEecCCCC--CchHHHHHHHHHhCCeEEEEEchh
Confidence 45665 4445789999998876678887654 45433 3456999999995 578999999999999999887532
Q ss_pred CCCCCCccccccccchhhhhhhHHHHHHHhhhccCCCCccccccccccccccCCCCCCCccccccCCcccccCCceeeec
Q 001076 530 LPGGSSKEADSVKESSRTEKASMFAKRAALLQHRKPTSSVEADITGGTAVGSQALPKPEISTASSKNYTFKKGDRVKFVG 609 (1163)
Q Consensus 530 ~~g~~~~e~~~~~~~~~~e~~s~~~k~s~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdrvk~~g 609 (1163)
+.
T Consensus 74 l~------------------------------------------------------------------------------ 75 (258)
T d1e32a2 74 IM------------------------------------------------------------------------------ 75 (258)
T ss_dssp HT------------------------------------------------------------------------------
T ss_pred hc------------------------------------------------------------------------------
Confidence 21
Q ss_pred cCCCCcccCCCCCCCCCcccCeeeeccccCCCCceeeeecCCCCCCCCCCCCCCCCCCcccccccccccCCCcchhhHHH
Q 001076 610 NVTSGTTVQPTLRGPGIGFRGRVILPFEDNDFSKIGVRFDRSIPEGNNLGGFCEDDHGFFCTASSLRLDSSLGDEVDKLA 689 (1163)
Q Consensus 610 ~~~~~~~~~~~~~~p~~g~rg~v~~~~e~n~~~kvgV~Fd~~~~~~~~l~~~c~~~~~ff~~~~~~~~d~s~~~~~~~~~ 689 (1163)
+.|+++.+..
T Consensus 76 ----------------------------------------------------------------------~~~~g~~~~~ 85 (258)
T d1e32a2 76 ----------------------------------------------------------------------SKLAGESESN 85 (258)
T ss_dssp ----------------------------------------------------------------------TSCTTHHHHH
T ss_pred ----------------------------------------------------------------------ccccccHHHH
Confidence 1234445556
Q ss_pred HHHHHHHHHhhccCCCeEEEEcchhhhhcC----ChhhHHHHHHHHhcC------CCCEEEEEeccccccccccCCCCCc
Q 001076 690 INELFEVALNESKSSPLIVFVKDIEKSLTG----NNDAYGALKSKLENL------PSNVVVIGSHTQLDSRKEKSHPGGL 759 (1163)
Q Consensus 690 l~~l~evl~~e~k~~P~IIffddid~~La~----~~~~~~~i~s~L~~L------~g~VivIgs~~~~d~~~~~~~~~~~ 759 (1163)
++.+|+.+.. ++|+||||||+|.++.+ ..+...++++.+..+ ..+|+|||+||+++.
T Consensus 86 l~~~f~~A~~---~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvi~tTn~~~~---------- 152 (258)
T d1e32a2 86 LRKAFEEAEK---NAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNS---------- 152 (258)
T ss_dssp HHHHHHHHHH---TCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEEEEEESCGGG----------
T ss_pred HHHHHHHHHh---cCCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccccccccCCccEEEeCCCccc----------
Confidence 7777887766 89999999999996552 223333344443332 448999999997666
Q ss_pred eeeccCCchhhhccccCCCCccccccccccchHHHHHhhhccccceeecCCchhHHHH--HHHHHHHHhhhhhhccchhh
Q 001076 760 LFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVETLKGQSNII 837 (1163)
Q Consensus 760 ~~~~~~~~~~~lldp~~pd~~~~~~~r~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferq~e~~LpdlkgR~~Il 837 (1163)
||| |++| ||++++++++|+.+.|..|+
T Consensus 153 ------------ld~---------------------------------------al~r~gRfd~~i~~~~P~~~~R~~il 181 (258)
T d1e32a2 153 ------------IDP---------------------------------------ALRRFGRFDREVDIGIPDATGRLEIL 181 (258)
T ss_dssp ------------SCG---------------------------------------GGTSTTSSCEEEECCCCCHHHHHHHH
T ss_pred ------------cch---------------------------------------hhhhcccccceeECCCCCHHHHHHHh
Confidence 555 5666 88888889999999999999
Q ss_pred HHHhhhhcCCC-CcccccchhhcccCCchhhhhhHHhHHhhhhhhhcCCCCCC-CCcc-cccccchhhhHHHHHhhhh
Q 001076 838 SIRSVLSRNGL-DCVDLESLCIKDQTLTTEGVEKIVGWALSHHFMHCSEAPGK-DAKL-KISTESIMYGLNILQGIQS 912 (1163)
Q Consensus 838 ~IHT~l~~~~L-~~vdLeeLa~~tkg~sgadIe~Lv~~Aas~Al~r~~~qi~~-~~kl-~Id~~sI~v~~~dF~~al~ 912 (1163)
+.+.. ...+ .+.+++.|+..|.||+++||+.+|++|+..|+.|....+.. +... ..-.+.+.++++||..|+.
T Consensus 182 ~~~l~--~~~~~~~~~~~~la~~t~G~s~adl~~lv~~A~~~a~~~~~~~~~~~~~~~~~~~~~~~~it~~Df~~AL~ 257 (258)
T d1e32a2 182 QIHTK--NMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALS 257 (258)
T ss_dssp HHTTT--TSCBCTTCCHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHCCCSSCCBHHHHHHCCBCHHHHHHHHT
T ss_pred hhhcc--CcccccccchhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccccchhhhhhhhhhhccCccCHHHHHHHhC
Confidence 88754 3333 67789999999999999999999999999999876432211 1111 1112334566778877754
No 11
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.73 E-value=5.6e-17 Score=170.66 Aligned_cols=186 Identities=23% Similarity=0.267 Sum_probs=134.4
Q ss_pred CCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEeccccccccc
Q 001076 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWF 1025 (1163)
Q Consensus 946 ~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~s~~~ 1025 (1163)
.+|++++|++++++.|..++..+.. + ..+.+++|||||||||||++|+++|++++++++.++......
T Consensus 6 ~~~~divGqe~~~~~l~~~i~~~~~------~---~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~~~--- 73 (238)
T d1in4a2 6 KSLDEFIGQENVKKKLSLALEAAKM------R---GEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVK--- 73 (238)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHHHHH------H---TCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCS---
T ss_pred CcHHHcCChHHHHHHHHHHHHHHHh------c---CCCCCeEEEECCCCCcHHHHHHHHHhccCCCcccccCccccc---
Confidence 4799999999999999998865322 1 223468999999999999999999999999999998766532
Q ss_pred cchHHHHHHHHHHHhccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHH-HhcC------CcccCCCCEEEEEEeCC
Q 001076 1026 GEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMV-NWDG------LRTKDKERVLVLAATNR 1098 (1163)
Q Consensus 1026 Ge~E~~Ir~lF~~A~k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~-~Ldg------l~~k~~~~VlVIaTTN~ 1098 (1163)
...+..++.. ....+++||||++.+. ...++.+...+..... .+.+ .......++++|++||.
T Consensus 74 ---~~~~~~~~~~--~~~~~~~~ide~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at~~ 143 (238)
T d1in4a2 74 ---QGDMAAILTS--LERGDVLFIDEIHRLN-----KAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTR 143 (238)
T ss_dssp ---HHHHHHHHHH--CCTTCEEEEETGGGCC-----HHHHHHHHHHHHTSCCCC---------------CCCEEEEEESC
T ss_pred ---HHHHHHHHHh--hccCCchHHHHHHHhh-----hHHHhhcccceeeeeeeeeecCcccccccccCCCCeEEEEecCC
Confidence 2234444443 3346899999999883 1222222222221100 0000 00012357899999999
Q ss_pred CCCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhCCCC-ChhhHHHHHHHcCCC
Q 001076 1099 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGY 1153 (1163)
Q Consensus 1099 p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~TeGy 1153 (1163)
+..+++.+++||...+.++.|+.+++..+++.+.....+. .+..+..+++.+.|-
T Consensus 144 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~s~gd 199 (238)
T d1in4a2 144 SGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGT 199 (238)
T ss_dssp GGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTTC
T ss_pred CccccccceeeeeEEEEecCCCHHHHHHHHHHhhhhccchhhHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999887765 455588888888874
No 12
>d1lgpa_ b.26.1.2 (A:) Cell cycle checkpoint protein Chfr {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3.3e-18 Score=163.32 Aligned_cols=103 Identities=27% Similarity=0.462 Sum_probs=90.2
Q ss_pred Cccceecccc--CCCCceeeecceeEEccCCccceeecC-CCCCccceEEEEeecCCcceEEEEEecCCceEEEcCeecC
Q 001076 132 IPWARLISQC--SQNSHLSMTGAVFTVGHNRQCDLYLKD-PSISKNLCRLRRIENGGPSGALLEITGGKGEVEVNGNVHP 208 (1163)
Q Consensus 132 ~pW~rL~s~~--~~~p~~~i~~~~~t~G~~~~cd~~l~d-~~~s~~~c~l~~~~~~g~~~a~le~~~~~G~v~vNg~~~~ 208 (1163)
.|||||+++. ...+++.+.+..|||||++.||+.|.| +.+|..||+|...+.++. +++++.|+||| +|||+++.
T Consensus 2 ~pwg~Li~~~~~~~~~~~~l~~~~~~iGR~~~~di~l~d~~~iSr~Ha~I~~~~~~~~--~~~~d~S~nGT-~vNg~~i~ 78 (113)
T d1lgpa_ 2 QPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDHCRIVVDEKSGQ--VTLEDTSTSGT-VINKLKVV 78 (113)
T ss_dssp CCCEEECCTTCCSSSCCEEECSSEEEEESSTTSSEECTTCTTSCTTCEEEEECTTTCC--EEEEECSSSCC-CCCCCCCC
T ss_pred CCeEEEEEECCCCCceEEEeCCCCEeeCCCCCCCeEecCCCCcChHHeEEEEccceee--EEecCCCceee-EECCEEcC
Confidence 3999999986 446688999999999999999999975 789999999998655543 88999999999 69999999
Q ss_pred CCceEEeeCCCEEEEccCCC-----eeEEeeecC
Q 001076 209 KDSQVVLRGGDELVFSPSGK-----HSYIFQQLS 237 (1163)
Q Consensus 209 k~~~~~L~~gDev~f~~~~~-----~ayifq~l~ 237 (1163)
|++.++|++||+|.|+...+ .+|+|++++
T Consensus 79 ~~~~~~L~~GD~I~i~~~~~~~~~~~~f~~e~~~ 112 (113)
T d1lgpa_ 79 KKQTCPLQTGDVIYLVYRKNEPEHNVAYLYESLS 112 (113)
T ss_dssp CSSCCCCCTTCEEEEECCSSCGGGCEEEECCCSC
T ss_pred CCceEECCCCCEEEEeecCCCccccEEEEEEccC
Confidence 99999999999999987643 589999875
No 13
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.70 E-value=2.6e-16 Score=165.88 Aligned_cols=192 Identities=21% Similarity=0.266 Sum_probs=135.3
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecccccccc
Q 001076 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKW 1024 (1163)
Q Consensus 945 ~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~s~~ 1024 (1163)
..+|+|++|++++++.|..++.....+ ..+++++||+||||||||++|+++|+++++++..++.......
T Consensus 5 P~~~ddivGq~~~~~~L~~~i~~~~~~---------~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~~- 74 (239)
T d1ixsb2 5 PKTLDEYIGQERLKQKLRVYLEAAKAR---------KEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKP- 74 (239)
T ss_dssp CCSGGGSCSCHHHHHHHHHHHHHHTTS---------SSCCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCSH-
T ss_pred CCCHHHhCCHHHHHHHHHHHHHHHHhc---------CCCCCeEEEECCCCCCHHHHHHHHHHHhCCCeEeccCCccccc-
Confidence 358999999999999999998653321 2345789999999999999999999999999999987664321
Q ss_pred ccchHHHHHHHHHHHhccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHH-HhcCC------cccCCCCEEEEEEeC
Q 001076 1025 FGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMV-NWDGL------RTKDKERVLVLAATN 1097 (1163)
Q Consensus 1025 ~Ge~E~~Ir~lF~~A~k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~-~Ldgl------~~k~~~~VlVIaTTN 1097 (1163)
+ ......... ....+|+||||+|.+. ...+..+...++.... .+.+. ....+.++++|++||
T Consensus 75 -~----~~~~~~~~~-~~~~~i~~iDe~~~~~-----~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 143 (239)
T d1ixsb2 75 -G----DLAAILANS-LEEGDILFIDEIHRLS-----RQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATT 143 (239)
T ss_dssp -H----HHHHHHHTT-CCTTCEEEEETGGGCC-----HHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEES
T ss_pred -h----hhHHHHHhh-ccCCCeeeeecccccc-----hhHHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEEeecc
Confidence 1 112121111 1235799999999873 2222233222222110 00000 011245788999999
Q ss_pred CCCCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhCCCC-ChhhHHHHHHHcCCCCHHH
Q 001076 1098 RPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSD 1157 (1163)
Q Consensus 1098 ~p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~TeGySgaD 1157 (1163)
.+.......++|+...+.+..|+.+++.++++.++...++. ++..+..+++.+.|-....
T Consensus 144 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~l~~ia~~s~gd~R~a 204 (239)
T d1ixsb2 144 RPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVA 204 (239)
T ss_dssp CCSSCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCCCBCHHHHHHHHHHTTSSHHHH
T ss_pred CcccccchhhcccceeeEeeccChhhhhHHHHHHHHHhCCccchHHHHHHHHHcCCCHHHH
Confidence 98888888888888999999999999999999999887655 4567889999999844433
No 14
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.67 E-value=3.1e-17 Score=176.35 Aligned_cols=213 Identities=23% Similarity=0.318 Sum_probs=149.2
Q ss_pred ccccccccccccchhHHHHHHHhhhhhhcccc-cccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEec
Q 001076 449 IEVSFESFPYYLSDITKNVLIASTYVHLKCNN-FAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDS 527 (1163)
Q Consensus 449 ~~vsf~~FPYylse~Tk~~L~~~~~~hLk~~~-~~k~~~~l~~~s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs 527 (1163)
=+||||+ ---.|.+|..|...... |++++ |.+++.. ..+-|||.||+| .-.-+||||||+.++.+++.+|.
T Consensus 4 p~~~~~d--i~G~~~~k~~l~~~i~~-l~~~~~~~~~g~~---~~~giLl~GppG--tGKT~la~aia~~~~~~~~~i~~ 75 (247)
T d1ixza_ 4 PKVTFKD--VAGAEEAKEELKEIVEF-LKNPSRFHEMGAR---IPKGVLLVGPPG--VGKTHLARAVAGEARVPFITASG 75 (247)
T ss_dssp CSCCGGG--CCSCHHHHHHHHHHHHH-HHCHHHHHHTTCC---CCSEEEEECCTT--SSHHHHHHHHHHHTTCCEEEEEH
T ss_pred CCCcHHH--HccHHHHHHHHHHHHHH-HHCHHHHHHcCCC---CCceEEEecCCC--CChhHHHHHHHHHcCCCEEEEEh
Confidence 3588988 44589999999887654 66644 4456543 335699999999 58899999999999999888875
Q ss_pred cCCCCCCCccccccccchhhhhhhHHHHHHHhhhccCCCCccccccccccccccCCCCCCCccccccCCcccccCCceee
Q 001076 528 LLLPGGSSKEADSVKESSRTEKASMFAKRAALLQHRKPTSSVEADITGGTAVGSQALPKPEISTASSKNYTFKKGDRVKF 607 (1163)
Q Consensus 528 ~~~~g~~~~e~~~~~~~~~~e~~s~~~k~s~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdrvk~ 607 (1163)
+.+
T Consensus 76 ~~l----------------------------------------------------------------------------- 78 (247)
T d1ixza_ 76 SDF----------------------------------------------------------------------------- 78 (247)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred HHh-----------------------------------------------------------------------------
Confidence 211
Q ss_pred eccCCCCcccCCCCCCCCCcccCeeeeccccCCCCceeeeecCCCCCCCCCCCCCCCCCCcccccccccccCCCcchhhH
Q 001076 608 VGNVTSGTTVQPTLRGPGIGFRGRVILPFEDNDFSKIGVRFDRSIPEGNNLGGFCEDDHGFFCTASSLRLDSSLGDEVDK 687 (1163)
Q Consensus 608 ~g~~~~~~~~~~~~~~p~~g~rg~v~~~~e~n~~~kvgV~Fd~~~~~~~~l~~~c~~~~~ff~~~~~~~~d~s~~~~~~~ 687 (1163)
.++|+|+.+
T Consensus 79 -----------------------------------------------------------------------~~~~~g~~~ 87 (247)
T d1ixza_ 79 -----------------------------------------------------------------------VEMFVGVGA 87 (247)
T ss_dssp -----------------------------------------------------------------------HHSCTTHHH
T ss_pred -----------------------------------------------------------------------hhccccHHH
Confidence 123555566
Q ss_pred HHHHHHHHHHHhhccCCCeEEEEcchhhhhcCC-------hhhHHHHHH----HHhcCC--CCEEEEEeccccccccccC
Q 001076 688 LAINELFEVALNESKSSPLIVFVKDIEKSLTGN-------NDAYGALKS----KLENLP--SNVVVIGSHTQLDSRKEKS 754 (1163)
Q Consensus 688 ~~l~~l~evl~~e~k~~P~IIffddid~~La~~-------~~~~~~i~s----~L~~L~--g~VivIgs~~~~d~~~~~~ 754 (1163)
..|+.+|+.+.. ++|+||||||||.++..+ ..-...+++ .|+.+. .+|+|||+||+++.
T Consensus 88 ~~l~~~f~~a~~---~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~vivi~tTn~~~~----- 159 (247)
T d1ixza_ 88 ARVRDLFETAKR---HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAATNRPDI----- 159 (247)
T ss_dssp HHHHHHHHHHTT---SSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCCEEEEEEESCGGG-----
T ss_pred HHHHHHHHHHHH---cCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCccc-----
Confidence 677777776644 899999999999965421 111222333 344443 48999999997665
Q ss_pred CCCCceeeccCCchhhhccccCCCCccccccccccchHHHHHhhhccccceeecCCchhHHHH--HHHHHHHHhhhhhhc
Q 001076 755 HPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVETLKG 832 (1163)
Q Consensus 755 ~~~~~~~~~~~~~~~~lldp~~pd~~~~~~~r~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferq~e~~Lpdlkg 832 (1163)
||| +++| ||+.+++++.|+.+.
T Consensus 160 -----------------ld~---------------------------------------al~R~~Rf~~~i~~~~P~~~e 183 (247)
T d1ixza_ 160 -----------------LDP---------------------------------------ALLRPGRFDRQIAIDAPDVKG 183 (247)
T ss_dssp -----------------SCG---------------------------------------GGGSTTSSCEEEECCSCCHHH
T ss_pred -----------------cCH---------------------------------------hHcCCCCCcEEEEECCcCHHH
Confidence 554 3333 555555555566666
Q ss_pred cchhhHHHhhhhcCCC-CcccccchhhcccCCchhhhhhHHhHHhhhhhhhc
Q 001076 833 QSNIISIRSVLSRNGL-DCVDLESLCIKDQTLTTEGVEKIVGWALSHHFMHC 883 (1163)
Q Consensus 833 R~~Il~IHT~l~~~~L-~~vdLeeLa~~tkg~sgadIe~Lv~~Aas~Al~r~ 883 (1163)
|.+|++.+.. ...+ .+.+++.|+..|.||+++||+.+|+.|+..++++.
T Consensus 184 R~~il~~~l~--~~~~~~~~~~~~la~~t~g~s~~di~~lv~~A~l~a~~~~ 233 (247)
T d1ixza_ 184 REQILRIHAR--GKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREG 233 (247)
T ss_dssp HHHHHHHHHT--TSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhc--ccCCccccCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 6666665543 1122 77889999999999999999999999999888653
No 15
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.62 E-value=2.4e-15 Score=157.60 Aligned_cols=175 Identities=24% Similarity=0.283 Sum_probs=129.2
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhC-----CcEEEEeccc
Q 001076 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG-----ANFINISMSS 1019 (1163)
Q Consensus 945 ~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg-----~pfi~Id~se 1019 (1163)
..+|+|++|++++++.|..++.. + ..+++||+||||+|||++|+++|++++ .+++.+++++
T Consensus 20 P~~~~diig~~~~~~~l~~~i~~----------~----~~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~n~s~ 85 (231)
T d1iqpa2 20 PQRLDDIVGQEHIVKRLKHYVKT----------G----SMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASD 85 (231)
T ss_dssp CCSTTTCCSCHHHHHHHHHHHHH----------T----CCCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTC
T ss_pred CCCHHHccCcHHHHHHHHHHHHc----------C----CCCeEEEECCCCCcHHHHHHHHHHHHHhcccCCCeeEEecCc
Confidence 35799999999999999998852 1 224799999999999999999999874 5788888876
Q ss_pred cccccccchHHHHHHHH--HHHhccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccCCCCEEEEEEeC
Q 001076 1020 ITSKWFGEGEKYVKAVF--SLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATN 1097 (1163)
Q Consensus 1020 L~s~~~Ge~E~~Ir~lF--~~A~k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN 1097 (1163)
..+.. .........+ .......+.||+|||+|.+. ...+ +.|+..+.. ...++.+|++||
T Consensus 86 ~~~~~--~~~~~~~~~~~~~~~~~~~~~iilide~d~~~-----~~~~-------~~ll~~l~~----~~~~~~~i~~~n 147 (231)
T d1iqpa2 86 ERGIN--VIREKVKEFARTKPIGGASFKIIFLDEADALT-----QDAQ-------QALRRTMEM----FSSNVRFILSCN 147 (231)
T ss_dssp HHHHH--TTHHHHHHHHHSCCGGGCSCEEEEEETGGGSC-----HHHH-------HHHHHHHHH----TTTTEEEEEEES
T ss_pred ccchh--HHHHHHHHHHhhhhccCCCceEEeehhhhhcc-----hhHH-------HHHhhhccc----CCcceEEEeccC
Confidence 43321 1111111111 11223457899999999774 1111 223333322 235789999999
Q ss_pred CCCCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhCCCC-ChhhHHHHHHHcCC
Q 001076 1098 RPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADG 1152 (1163)
Q Consensus 1098 ~p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~TeG 1152 (1163)
....+++++++|+ .++.+..|+..+...+++.++.+.++. ++..++.|++.+.|
T Consensus 148 ~~~~i~~~l~sR~-~~i~~~~~~~~~~~~~l~~~~~~e~i~i~~~~l~~I~~~~~g 202 (231)
T d1iqpa2 148 YSSKIIEPIQSRC-AIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEG 202 (231)
T ss_dssp CGGGSCHHHHHTE-EEEECCCCCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTT
T ss_pred ChhhchHhHhCcc-ccccccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHHcCC
Confidence 9999999999999 689999999999999999999988764 66778999999887
No 16
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.59 E-value=9.9e-15 Score=152.19 Aligned_cols=177 Identities=21% Similarity=0.232 Sum_probs=125.3
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCC-----cEEEEeccc
Q 001076 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGA-----NFINISMSS 1019 (1163)
Q Consensus 945 ~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~-----pfi~Id~se 1019 (1163)
..+|+|++|++++++.|..++.. + . ..++||+||||+|||++|+++|++++. .++.++.++
T Consensus 10 P~~~~divg~~~~~~~L~~~i~~----------~---~-~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~ 75 (227)
T d1sxjc2 10 PETLDEVYGQNEVITTVRKFVDE----------G---K-LPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASD 75 (227)
T ss_dssp CSSGGGCCSCHHHHHHHHHHHHT----------T---C-CCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTS
T ss_pred CCCHHHccCcHHHHHHHHHHHHc----------C---C-CCeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEecccc
Confidence 45899999999999999998752 1 1 236999999999999999999999842 356666655
Q ss_pred cccccccchHHHHHHHHHHHhccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccCCCCEEEEEEeCCC
Q 001076 1020 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRP 1099 (1163)
Q Consensus 1020 L~s~~~Ge~E~~Ir~lF~~A~k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p 1099 (1163)
..+.............+.........||+|||+|.+. ... .+.|+..++.. ..++++++++|.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~-----~~~-------~~~Ll~~le~~----~~~~~~~~~~~~~ 139 (227)
T d1sxjc2 76 DRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMT-----NAA-------QNALRRVIERY----TKNTRFCVLANYA 139 (227)
T ss_dssp CCSHHHHHTHHHHHHHBCCSSSCSCEEEEETTGGGSC-----HHH-------HHHHHHHHHHT----TTTEEEEEEESCG
T ss_pred cCCeeeeecchhhccccccccCCCeEEEEEeccccch-----hhH-------HHHHHHHhhhc----ccceeeccccCcH
Confidence 4332111111000011111112234699999999873 122 22333333322 2568889999999
Q ss_pred CCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhCCCC-ChhhHHHHHHHcCC
Q 001076 1100 FDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADG 1152 (1163)
Q Consensus 1100 ~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~TeG 1152 (1163)
..+.+.+++|+ ..+.|..|+.++..+++..++..+++. ++..++.|++.+.|
T Consensus 140 ~~i~~~i~sr~-~~i~~~~~~~~~i~~~l~~I~~~e~i~i~~~~l~~i~~~s~G 192 (227)
T d1sxjc2 140 HKLTPALLSQC-TRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG 192 (227)
T ss_dssp GGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTT
T ss_pred HHhHHHHHHHH-hhhccccccccccccccccccccccccCCHHHHHHHHHHcCC
Confidence 99999999998 789999999999999999999887764 66778999999987
No 17
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.57 E-value=1.6e-14 Score=152.28 Aligned_cols=192 Identities=18% Similarity=0.228 Sum_probs=124.1
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCC-hhhhh---cCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecccc
Q 001076 945 GVTFDDIGALENVKDTLKELVMLPLQR-PELFC---KGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 1020 (1163)
Q Consensus 945 ~~tfddI~Gleevk~~L~e~V~lpl~~-pelf~---k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL 1020 (1163)
..+|++++|+++.+++|.+++...... +..+. ..+ ..+.+++||+||||||||++|+++|++++++++.+++++.
T Consensus 10 P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~-~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~~~~~~~~ 88 (253)
T d1sxja2 10 PTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDG-SGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDV 88 (253)
T ss_dssp CSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTS-TTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEECTTSC
T ss_pred CCCHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccC-CCCCceEEEECCCCCCHHHHHHHHHHHHHhhhhccccccc
Confidence 357999999999999999988653211 11110 111 2234689999999999999999999999999999998876
Q ss_pred ccccccch--HHHHH----------HHHHHHhccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccCCC
Q 001076 1021 TSKWFGEG--EKYVK----------AVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKE 1088 (1163)
Q Consensus 1021 ~s~~~Ge~--E~~Ir----------~lF~~A~k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~~~ 1088 (1163)
.+.+.... ...+. ..........+.||++||+|.+..... .... .++..... ...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~~-----~~~~----~~~~~~~~----~~~ 155 (253)
T d1sxja2 89 RSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDR-----GGVG----QLAQFCRK----TST 155 (253)
T ss_dssp CCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTST-----THHH----HHHHHHHH----CSS
T ss_pred hhhHHHHHHHHHHhhcchhhhhhhhhhhcccccccceEEEeeeccccccchh-----hhhH----HHhhhhcc----ccc
Confidence 54321100 00000 000011223467999999998853221 1222 22222211 224
Q ss_pred CEEEEEEeCCCCCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhCCCC-ChhhHHHHHHHcCC
Q 001076 1089 RVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADG 1152 (1163)
Q Consensus 1089 ~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~TeG 1152 (1163)
+++++++++....++ .+ +|+...|.|+.|+.+++..+++.++.++++. ++..++.|++.+.|
T Consensus 156 ~ii~i~~~~~~~~~~-~l-~~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~~~l~~i~~~s~G 218 (253)
T d1sxja2 156 PLILICNERNLPKMR-PF-DRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRG 218 (253)
T ss_dssp CEEEEESCTTSSTTG-GG-TTTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHTTT
T ss_pred ccccccccccccccc-cc-cceeeeeeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCC
Confidence 566666555555555 34 4445899999999999999999999875543 55668999999876
No 18
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.54 E-value=4.3e-14 Score=149.72 Aligned_cols=175 Identities=24% Similarity=0.284 Sum_probs=129.6
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCc-------------
Q 001076 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGAN------------- 1011 (1163)
Q Consensus 945 ~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~p------------- 1011 (1163)
..+|+|++|++++++.|..++.. .+.+..+||+||||+|||++|+++++.++.+
T Consensus 8 P~~~~dlig~~~~~~~L~~~i~~-------------~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~ 74 (239)
T d1njfa_ 8 PQTFADVVGQEHVLTALANGLSL-------------GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDN 74 (239)
T ss_dssp CSSGGGSCSCHHHHHHHHHHHHT-------------TCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHH
T ss_pred CCCHHHccChHHHHHHHHHHHHc-------------CCCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchH
Confidence 35899999999999999988753 2344679999999999999999999988432
Q ss_pred -----------EEEEeccccccccccchHHHHHHHHHHHhcc----CCeEEEEccccccccCCCCcchHHHHHHHHHHHH
Q 001076 1012 -----------FINISMSSITSKWFGEGEKYVKAVFSLASKI----APSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFM 1076 (1163)
Q Consensus 1012 -----------fi~Id~seL~s~~~Ge~E~~Ir~lF~~A~k~----~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL 1076 (1163)
++.++.++.. ....++.++..+... ...||||||+|.|- ....+.|+
T Consensus 75 ~~~i~~~~~~~~~~~~~~~~~------~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l~------------~~~q~~Ll 136 (239)
T d1njfa_ 75 CREIEQGRFVDLIEIDAASRT------KVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLS------------RHSFNALL 136 (239)
T ss_dssp HHHHHHTCCTTEEEEETTCSS------SHHHHHHHHHSCCCSCSSSSSEEEEEETGGGSC------------HHHHHHHH
T ss_pred HHHHHcCCCCeEEEecchhcC------CHHHHHHHHHHHHhccccCCCEEEEEECcccCC------------HHHHHHHH
Confidence 4444433211 123456666555332 34699999999882 12234455
Q ss_pred HHhcCCcccCCCCEEEEEEeCCCCCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhCCCC-ChhhHHHHHHHcCCCCH
Q 001076 1077 VNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSG 1155 (1163)
Q Consensus 1077 ~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~TeGySg 1155 (1163)
..|+. ...++.+|++||.+..+.+++++|+ ..+.++.|+.++..+++..++...+.. ++..++.|+..+.|--.
T Consensus 137 k~lE~----~~~~~~~il~tn~~~~i~~~i~SRc-~~i~~~~~~~~~i~~~l~~i~~~e~~~~~~~~l~~i~~~s~Gd~R 211 (239)
T d1njfa_ 137 KTLEE----PPEHVKFLLATTDPQKLPVTILSRC-LQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLR 211 (239)
T ss_dssp HHHHS----CCTTEEEEEEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHTTTCHH
T ss_pred HHHhc----CCCCeEEEEEcCCccccChhHhhhh-cccccccCcHHHhhhHHHHHHhhhccCCCHHHHHHHHHHcCCCHH
Confidence 55543 2356889999999999999999999 789999999999999999988765543 66678899998887433
No 19
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.51 E-value=5.4e-14 Score=146.76 Aligned_cols=177 Identities=19% Similarity=0.197 Sum_probs=128.4
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCC-----cEEEEeccc
Q 001076 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGA-----NFINISMSS 1019 (1163)
Q Consensus 945 ~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~-----pfi~Id~se 1019 (1163)
..+|+|++|++++++.|..++.. + ...++||+||||+|||++|+.+|++++. .++.+++++
T Consensus 11 P~~~~d~ig~~~~~~~L~~~~~~----------~----~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~ 76 (224)
T d1sxjb2 11 PQVLSDIVGNKETIDRLQQIAKD----------G----NMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD 76 (224)
T ss_dssp CSSGGGCCSCTHHHHHHHHHHHS----------C----CCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTS
T ss_pred CCCHHHhcCCHHHHHHHHHHHHc----------C----CCCeEEEECCCCCCchhhHHHHHHHHhccccccccccccccc
Confidence 46799999999999999988752 1 1246999999999999999999999854 477777766
Q ss_pred cccccccchHHHHHHHHHHH-h------ccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccCCCCEEE
Q 001076 1020 ITSKWFGEGEKYVKAVFSLA-S------KIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLV 1092 (1163)
Q Consensus 1020 L~s~~~Ge~E~~Ir~lF~~A-~------k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlV 1092 (1163)
..+. ..+...+... . .....||+|||+|.+. ...+ +.|+..++. ......+
T Consensus 77 ~~~~------~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~-----~~~~-------~~ll~~~e~----~~~~~~~ 134 (224)
T d1sxjb2 77 DRGI------DVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT-----AGAQ-------QALRRTMEL----YSNSTRF 134 (224)
T ss_dssp CCSH------HHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSC-----HHHH-------HTTHHHHHH----TTTTEEE
T ss_pred cCCc------eehhhHHHHHHHhhccCCCcceEEEEEecccccc-----hhHH-------HHHhhhccc----cccceee
Confidence 4321 1222222211 1 1235699999999884 1122 222222222 2356888
Q ss_pred EEEeCCCCCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhCCCC-ChhhHHHHHHHcCCCCHHHH
Q 001076 1093 LAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDL 1158 (1163)
Q Consensus 1093 IaTTN~p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~TeGySgaDL 1158 (1163)
|.+++....+.+++++|+ ..|.|+.|+.++...++..++.++++. ++..++.|+..+.|--..-|
T Consensus 135 i~~~~~~~~i~~~l~sr~-~~i~~~~~~~~~i~~~l~~i~~~e~~~i~~~~l~~I~~~s~Gd~R~ai 200 (224)
T d1sxjb2 135 AFACNQSNKIIEPLQSQC-AILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAI 200 (224)
T ss_dssp EEEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTTCHHHHH
T ss_pred eeccCchhhhhhHHHHHH-HHhhhcccchhhhHHHHHHHHHhcccCCCHHHHHHHHHHcCCcHHHHH
Confidence 899999999999999999 689999999999999999999887654 56668899999887544333
No 20
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.50 E-value=2.6e-13 Score=142.61 Aligned_cols=179 Identities=15% Similarity=0.221 Sum_probs=115.6
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhC---CcEEEEecccc-
Q 001076 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG---ANFINISMSSI- 1020 (1163)
Q Consensus 945 ~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg---~pfi~Id~seL- 1020 (1163)
..+|++++|++++++.|..++.. . ..+.++||+||||+|||++|+++|+++. .....++....
T Consensus 7 P~~~~diig~~~~~~~L~~~~~~----------~---~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~ 73 (252)
T d1sxje2 7 PKSLNALSHNEELTNFLKSLSDQ----------P---RDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFV 73 (252)
T ss_dssp CCSGGGCCSCHHHHHHHHTTTTC----------T---TCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC---------
T ss_pred CCCHHHccCcHHHHHHHHHHHHc----------C---CCCCeEEEECCCCCCHHHHHHHHHHhhcCcccccccccccccc
Confidence 46899999999999988765532 1 1234799999999999999999999872 11111111100
Q ss_pred --------------------ccccccchH-HHHHHHHHHHh--------------ccCCeEEEEccccccccCCCCcchH
Q 001076 1021 --------------------TSKWFGEGE-KYVKAVFSLAS--------------KIAPSVVFVDEVDSMLGRRENPGEH 1065 (1163)
Q Consensus 1021 --------------------~s~~~Ge~E-~~Ir~lF~~A~--------------k~~PsILfIDEID~L~g~r~s~~~~ 1065 (1163)
.....+... ..+........ .....+|+|||+|.+. ...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~-----~~~- 147 (252)
T d1sxje2 74 TASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLT-----KDA- 147 (252)
T ss_dssp ---------CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSC-----HHH-
T ss_pred ccccchhhhhhccCCccceeeecccccCCcceeeehhhhhhhhhhhhhhhcccccCCCceEEEeccccccc-----ccc-
Confidence 000001111 11111111111 1234599999999873 111
Q ss_pred HHHHHHHHHHHHHhcCCcccCCCCEEEEEEeCCCCCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhCCC--CChhhH
Q 001076 1066 EAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEEL--ASDVDL 1143 (1163)
Q Consensus 1066 eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~~l--~~dvdl 1143 (1163)
.+.++..++. ...++++|++||.++.+.+.+++|| ..|+|++|+.++..++++.++.++++ ..+..+
T Consensus 148 ------~~~l~~~~e~----~~~~~~~Il~tn~~~~i~~~l~sR~-~~i~~~~~~~~~~~~~l~~i~~~e~~~~~~~~~l 216 (252)
T d1sxje2 148 ------QAALRRTMEK----YSKNIRLIMVCDSMSPIIAPIKSQC-LLIRCPAPSDSEISTILSDVVTNERIQLETKDIL 216 (252)
T ss_dssp ------HHHHHHHHHH----STTTEEEEEEESCSCSSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHHHTCEECCSHHH
T ss_pred ------chhhhccccc----ccccccceeeeccccchhhhhhcch-heeeecccchhhHHHHHHHHHHHcCCCCCcHHHH
Confidence 2223333322 2356889999999999999999999 68999999999999999999887543 455667
Q ss_pred HHHHHHcCCC
Q 001076 1144 EGIANMADGY 1153 (1163)
Q Consensus 1144 ~~LA~~TeGy 1153 (1163)
+.|+..+.|-
T Consensus 217 ~~i~~~s~Gd 226 (252)
T d1sxje2 217 KRIAQASNGN 226 (252)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHcCCc
Confidence 8999998873
No 21
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.48 E-value=1.8e-13 Score=151.57 Aligned_cols=194 Identities=17% Similarity=0.233 Sum_probs=134.8
Q ss_pred cccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecccccc-----cc
Q 001076 950 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITS-----KW 1024 (1163)
Q Consensus 950 dI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~s-----~~ 1024 (1163)
.++|++++++.+.+.+...... + ..-.+|...+||.||+|+|||+||++||+.++.+|+++||+++.. ..
T Consensus 23 ~viGQ~~a~~~v~~~v~~~~~~--l---~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~~~~~~~~~l 97 (315)
T d1r6bx3 23 LVFGQDKAIEALTEAIKMARAG--L---GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRL 97 (315)
T ss_dssp TSCSCHHHHHHHHHHHHHHHTT--C---SCTTSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSSCCSSS
T ss_pred eecChHHHHHHHHHHHHHHHcc--C---CCCCCCceEEEEECCCcchhHHHHHHHHhhccCCeeEeccccccchhhhhhh
Confidence 4669999999999887542210 0 111345456999999999999999999999999999999998652 34
Q ss_pred ccchHHHHH-----HHHHHHhccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcc-------cCCCCEEE
Q 001076 1025 FGEGEKYVK-----AVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRT-------KDKERVLV 1092 (1163)
Q Consensus 1025 ~Ge~E~~Ir-----~lF~~A~k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~-------k~~~~VlV 1092 (1163)
+|...+++. .+.....+.+.+|+++||||.. +..+.+.|+..++...- .+-.+.++
T Consensus 98 ~g~~~gy~g~~~~~~l~~~~~~~~~~vvl~DeieKa------------~~~V~~~lLqild~G~ltd~~Gr~vdf~n~ii 165 (315)
T d1r6bx3 98 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKA------------HPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 165 (315)
T ss_dssp CCCCSCSHHHHHTTHHHHHHHHCSSEEEEEETGGGS------------CHHHHHHHHHHHHHSEEEETTTEEEECTTEEE
T ss_pred cccCCCccccccCChhhHHHHhCccchhhhcccccc------------cchHhhhhHHhhccceecCCCCCccCccceEE
Confidence 454433332 2445556777899999999966 24466667766643221 13468899
Q ss_pred EEEeCCC-------------------------CCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhC-------CC---
Q 001076 1093 LAATNRP-------------------------FDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-------EL--- 1137 (1163)
Q Consensus 1093 IaTTN~p-------------------------~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~-------~l--- 1137 (1163)
|+|+|.- ..+.|+|+.|++.++.+.+.+.++..+|+..++.+. .+
T Consensus 166 I~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~~~~l~~~~~~l~~~~i~l~ 245 (315)
T d1r6bx3 166 VMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLE 245 (315)
T ss_dssp EEEECSSCC-----------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EeccchhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHhcCcchh
Confidence 9999842 137789999999999999999999999988877541 11
Q ss_pred CChhhHHHHHHHc--CCCCHHHHHh
Q 001076 1138 ASDVDLEGIANMA--DGYSGSDLKV 1160 (1163)
Q Consensus 1138 ~~dvdl~~LA~~T--eGySgaDLk~ 1160 (1163)
..+..++.|+... ..|.+..|+.
T Consensus 246 ~~~~a~~~l~~~~yd~~~GaR~L~r 270 (315)
T d1r6bx3 246 VSQEARNWLAEKGYDRAMGARPMAR 270 (315)
T ss_dssp ECHHHHHHHHHHHCBTTTBTTTHHH
T ss_pred hHHHHHHHHHHhCCCCCCChhhHHH
Confidence 2444566666542 2444445543
No 22
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.47 E-value=3.3e-13 Score=140.59 Aligned_cols=176 Identities=20% Similarity=0.242 Sum_probs=124.4
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh------CCcEEEEecc
Q 001076 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA------GANFINISMS 1018 (1163)
Q Consensus 945 ~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eL------g~pfi~Id~s 1018 (1163)
..+|++++|++++++.|..++.. . ...++||+||||+|||++++++|+++ ....+.++.+
T Consensus 8 P~~~~diig~~~~~~~l~~~i~~----------~----~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~ 73 (237)
T d1sxjd2 8 PKNLDEVTAQDHAVTVLKKTLKS----------A----NLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNAS 73 (237)
T ss_dssp CSSTTTCCSCCTTHHHHHHHTTC----------T----TCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSS
T ss_pred CCCHHHccCcHHHHHHHHHHHHc----------C----CCCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhheecc
Confidence 45799999999999998887642 1 12469999999999999999999987 5667777765
Q ss_pred ccccccccchHHHHHHH------------HHHHhccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccC
Q 001076 1019 SITSKWFGEGEKYVKAV------------FSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKD 1086 (1163)
Q Consensus 1019 eL~s~~~Ge~E~~Ir~l------------F~~A~k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~ 1086 (1163)
...+... ....++.. +.........||||||+|.|.. . ..+.++..+.. .
T Consensus 74 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~-----~-------~~~~l~~~~~~----~ 135 (237)
T d1sxjd2 74 DERGISI--VREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA-----D-------AQSALRRTMET----Y 135 (237)
T ss_dssp SCCCHHH--HTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCH-----H-------HHHHHHHHHHH----T
T ss_pred ccccchH--HHHHHHHHhhhhhhhhhHHHHhhccccCceEEEEecccccCH-----H-------HHHHHhhcccc----c
Confidence 5432110 01111111 1111222345999999998841 1 11222222221 2
Q ss_pred CCCEEEEEEeCCCCCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhCCCC-ChhhHHHHHHHcCCC
Q 001076 1087 KERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGY 1153 (1163)
Q Consensus 1087 ~~~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~TeGy 1153 (1163)
....++|.+++....+.+.+++|| .++.|++|+.++..++++.++.++++. ++..++.||+.+.|-
T Consensus 136 ~~~~~~i~~~~~~~~~~~~l~sr~-~~i~f~~~~~~~~~~~L~~i~~~e~i~i~~~~l~~ia~~s~gd 202 (237)
T d1sxjd2 136 SGVTRFCLICNYVTRIIDPLASQC-SKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGD 202 (237)
T ss_dssp TTTEEEEEEESCGGGSCHHHHHHS-EEEECCCCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSSC
T ss_pred cccccccccccccccccccccchh-hhhccccccccccchhhhhhhhhhcCcCCHHHHHHHHHHcCCC
Confidence 255778888898889999999999 789999999999999999999887764 667789999999873
No 23
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=3.2e-15 Score=161.77 Aligned_cols=175 Identities=18% Similarity=0.229 Sum_probs=121.9
Q ss_pred eeeeecCCCCCCCCCC--CCCCCCCC-cccccccccccCCCcchhhHHHHHHHHHHHHhhccCCCeEEEEcchhhhhcC-
Q 001076 644 IGVRFDRSIPEGNNLG--GFCEDDHG-FFCTASSLRLDSSLGDEVDKLAINELFEVALNESKSSPLIVFVKDIEKSLTG- 719 (1163)
Q Consensus 644 vgV~Fd~~~~~~~~l~--~~c~~~~~-ff~~~~~~~~d~s~~~~~~~~~l~~l~evl~~e~k~~P~IIffddid~~La~- 719 (1163)
-||++.+|+++||++- ..|..-.. ||....... .++|.++.+..++.+|+.+.. ++|+||||||+|.++..
T Consensus 42 ~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l--~~~~~~~~~~~l~~~f~~A~~---~~p~il~ideid~l~~~~ 116 (265)
T d1r7ra3 42 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL--LTMWFGESEANVREIFDKARQ---AAPCVLFFDELDSIAKAR 116 (265)
T ss_dssp CEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHH--HTSCTTTHHHHHHHHHHHHHH---TCSEEEEESSGGGTCCHH
T ss_pred CeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHh--hhccccchHHHHHHHHHHHHh---cCCcceeHHhhhhccccC
Confidence 3788999999999987 33433333 332222222 378999999999999888866 89999999999997652
Q ss_pred ---C---hhhHHHHHHHHh-cC-----CCCEEEEEeccccccccccCCCCCceeeccCCchhhhccccCCCCcccccccc
Q 001076 720 ---N---NDAYGALKSKLE-NL-----PSNVVVIGSHTQLDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRS 787 (1163)
Q Consensus 720 ---~---~~~~~~i~s~L~-~L-----~g~VivIgs~~~~d~~~~~~~~~~~~~~~~~~~~~~lldp~~pd~~~~~~~r~ 787 (1163)
. ...-..+++.|+ .+ ..+|+|||++|+++. |||
T Consensus 117 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ttn~~~~----------------------ld~------------- 161 (265)
T d1r7ra3 117 GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI----------------------IDP------------- 161 (265)
T ss_dssp HHCCCTTHHHHHHHHHHHHHTCC------CCEEEECCBSCTT----------------------TSC-------------
T ss_pred CCcCCCCcHHHHHHHHHHHHHhhCcCCCCCEEEEEeCCCchh----------------------CCH-------------
Confidence 1 122223444433 33 237999999997665 444
Q ss_pred ccchHHHHHhhhccccceeecCCchhHHHH--HHHHHHHHhhhhhhccchhhHHHhhhhcCCC-CcccccchhhcccCCc
Q 001076 788 KETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVETLKGQSNIISIRSVLSRNGL-DCVDLESLCIKDQTLT 864 (1163)
Q Consensus 788 ~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferq~e~~LpdlkgR~~Il~IHT~l~~~~L-~~vdLeeLa~~tkg~s 864 (1163)
|++| ||+.+++++.|+.+.|.+|++.|.. ...+ .+++++.|+..|.||+
T Consensus 162 --------------------------al~r~gRf~~~i~~~~p~~~~R~~il~~~l~--~~~~~~~~~l~~la~~t~g~s 213 (265)
T d1r7ra3 162 --------------------------AILRPGRLDQLIYIPLPDEKSRVAILKANLR--KSPVAKDVDLEFLAKMTNGFS 213 (265)
T ss_dssp --------------------------GGGSSTTSEEEEECCCCCCHHHHHHHHHHTT--CC----CCCCHHHHHHHCSSC
T ss_pred --------------------------HHhCCCCccEEEEecchHHHHHHHHHHHHhc--cCCchhhhhHHHHHhcCCCCC
Confidence 4444 6666677777777777778777643 2233 6789999999999999
Q ss_pred hhhhhhHHhHHhhhhhhhcCCC
Q 001076 865 TEGVEKIVGWALSHHFMHCSEA 886 (1163)
Q Consensus 865 gadIe~Lv~~Aas~Al~r~~~q 886 (1163)
++||+.||+.|...|+++..+.
T Consensus 214 ~~di~~lv~~A~~~A~~~~~~~ 235 (265)
T d1r7ra3 214 GADLTEICQRACKLAIRESIES 235 (265)
T ss_dssp CHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999876543
No 24
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.45 E-value=3e-13 Score=146.61 Aligned_cols=180 Identities=21% Similarity=0.345 Sum_probs=131.7
Q ss_pred cccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh----------CCcEEEEec
Q 001076 948 FDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----------GANFINISM 1017 (1163)
Q Consensus 948 fddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eL----------g~pfi~Id~ 1017 (1163)
++.++|.++..+++.+.+.. +...++||.||||+|||+++..+|+.. +..++.+++
T Consensus 17 ld~~igRd~Ei~~l~~iL~r--------------~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~ 82 (268)
T d1r6bx2 17 IDPLIGREKELERAIQVLCR--------------RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDI 82 (268)
T ss_dssp SCCCCSCHHHHHHHHHHHTS--------------SSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCC
T ss_pred CCcccChHHHHHHHHHHHhc--------------CccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeee
Confidence 45678999999988887742 122589999999999999999999875 567899999
Q ss_pred ccccc--ccccchHHHHHHHHHHHhccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccCCCCEEEEEE
Q 001076 1018 SSITS--KWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAA 1095 (1163)
Q Consensus 1018 seL~s--~~~Ge~E~~Ir~lF~~A~k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaT 1095 (1163)
..+.. ++.|+.++.+..++..+.+....||||||++.|++.....+.... +.+.| .... .+..+.+|++
T Consensus 83 ~~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d---~a~~L----kp~L--~rg~i~vIga 153 (268)
T d1r6bx2 83 GSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD---AANLI----KPLL--SSGKIRVIGS 153 (268)
T ss_dssp C---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHH---HHHHH----SSCS--SSCCCEEEEE
T ss_pred chHhccCccchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCCCCcccc---HHHHh----hHHH--hCCCCeEEEe
Confidence 99885 678999999999999999999999999999999865443332211 11222 1111 2467999999
Q ss_pred eCC-----CCCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhh----CCC-CChhhHHHHHHHcC
Q 001076 1096 TNR-----PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAK----EEL-ASDVDLEGIANMAD 1151 (1163)
Q Consensus 1096 TN~-----p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k----~~l-~~dvdl~~LA~~Te 1151 (1163)
|.. ...-+++|.||| .+|.+..|+.++-.+|++.+... ..+ ..+..+..+..+++
T Consensus 154 tT~eey~~~~e~d~al~rrF-~~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ 218 (268)
T d1r6bx2 154 TTYQEFSNIFEKDRALARRF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 218 (268)
T ss_dssp ECHHHHHCCCCCTTSSGGGE-EEEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhhcHHHHhhh-cccccCCCCHHHHHHHHHHhhHHHhccCCEEeChHHHHHHHHHHH
Confidence 864 456689999999 79999999999999999876543 122 24444555555443
No 25
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.42 E-value=5.1e-13 Score=147.95 Aligned_cols=194 Identities=18% Similarity=0.260 Sum_probs=132.5
Q ss_pred cccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEeccccc-----
Q 001076 950 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSIT----- 1021 (1163)
Q Consensus 950 dI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~seL~----- 1021 (1163)
.|+||+++++.+...+...... -..-.+|...+||+||+|+|||++|+.||+.+ +.+|+.++|+++.
T Consensus 24 ~v~GQ~~ai~~v~~~i~~~~~~-----l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~~~~~ 98 (315)
T d1qvra3 24 RVVGQDEAIRAVADAIRRARAG-----LKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAV 98 (315)
T ss_dssp HSCSCHHHHHHHHHHHHHHGGG-----CSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCSSGGG
T ss_pred eEeCHHHHHHHHHHHHHHHhcC-----CCCCCCCceEEEEECCCcchHHHHHHHHHHHhcCCCcceEEEeccccccchhh
Confidence 4679999999998877542210 01113444458999999999999999999998 7899999998865
Q ss_pred cccccchHHHHH-----HHHHHHhccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCccc-------CCCC
Q 001076 1022 SKWFGEGEKYVK-----AVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK-------DKER 1089 (1163)
Q Consensus 1022 s~~~Ge~E~~Ir-----~lF~~A~k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k-------~~~~ 1089 (1163)
+..+|.+..++. .+....++++.+||||||||.. ...+.+.|+..++....+ +-.+
T Consensus 99 ~~L~g~~~gyvG~~~~~~l~~~~~~~p~~Vvl~DEieK~------------~~~v~~~ll~~l~~g~~~~~~gr~v~~~~ 166 (315)
T d1qvra3 99 SRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKA------------HPDVFNILLQILDDGRLTDSHGRTVDFRN 166 (315)
T ss_dssp GGC--------------CHHHHHHHCSSEEEEESSGGGS------------CHHHHHHHHHHHTTTEECCSSSCCEECTT
T ss_pred hhhcCCCCCCcCcccCChHHHHHHhCCCcEEEEehHhhc------------CHHHHHHHHHHhccCceeCCCCcEecCcc
Confidence 335565555543 2455566777799999999965 244666666666543222 2358
Q ss_pred EEEEEEeCC--------------------------CCCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhC-------C
Q 001076 1090 VLVLAATNR--------------------------PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-------E 1136 (1163)
Q Consensus 1090 VlVIaTTN~--------------------------p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~-------~ 1136 (1163)
.++|+|||. ...+.++|++||+.++.|.+.+.++..+|+...+.+. .
T Consensus 167 ~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I~~~~l~~l~~rl~~~~ 246 (315)
T d1qvra3 167 TVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKR 246 (315)
T ss_dssp EEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred eEEEEecccChHHHhhhcccccchhhhhHHHHHHHHhhcCHHHHhcCCeeeeccchhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 999999995 3568999999999999999999999999988766541 2
Q ss_pred C---CChhhHHHHHHHc--CCCCHHHHHh
Q 001076 1137 L---ASDVDLEGIANMA--DGYSGSDLKV 1160 (1163)
Q Consensus 1137 l---~~dvdl~~LA~~T--eGySgaDLk~ 1160 (1163)
+ .++..++.|++.. ..|.+..|+.
T Consensus 247 i~l~i~~~~~~~L~~~~y~~~~GAR~L~r 275 (315)
T d1qvra3 247 ISLELTEAAKDFLAERGYDPVFGARPLRR 275 (315)
T ss_dssp CEEEECHHHHHHHHHHHCBTTTBTSTHHH
T ss_pred ccccccHHHHHHHHHhCCCCCCCcchHHH
Confidence 1 1445567777653 2444445543
No 26
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.39 E-value=4.6e-13 Score=138.60 Aligned_cols=156 Identities=22% Similarity=0.386 Sum_probs=114.9
Q ss_pred cccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh----------CCcEEEEec
Q 001076 948 FDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----------GANFINISM 1017 (1163)
Q Consensus 948 fddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eL----------g~pfi~Id~ 1017 (1163)
++.++|.++..+++.+.+.. +...++||.||||+|||+++..+|+.. +..++.+|.
T Consensus 21 ld~~igRd~Ei~~l~~iL~r--------------~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~ 86 (195)
T d1jbka_ 21 LDPVIGRDEEIRRTIQVLQR--------------RTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 86 (195)
T ss_dssp SCCCCSCHHHHHHHHHHHTS--------------SSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECH
T ss_pred CCCCcCcHHHHHHHHHHHhc--------------cCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeH
Confidence 45678999999888887742 122589999999999999999999866 578999999
Q ss_pred ccccc--ccccchHHHHHHHHHHHhccC-CeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccCCCCEEEEE
Q 001076 1018 SSITS--KWFGEGEKYVKAVFSLASKIA-PSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLA 1094 (1163)
Q Consensus 1018 seL~s--~~~Ge~E~~Ir~lF~~A~k~~-PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIa 1094 (1163)
+.++. ++.|+.|+.+..++.++.++. ..||||||++.|++.....+.... .+.|.-.+. +..+.+|+
T Consensus 87 ~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~----~~~Lkp~L~------rg~l~~Ig 156 (195)
T d1jbka_ 87 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDA----GNMLKPALA------RGELHCVG 156 (195)
T ss_dssp HHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCC----HHHHHHHHH------TTSCCEEE
T ss_pred HHHhccCCccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCCCCCcccH----HHHHHHHHh------CCCceEEe
Confidence 99874 466888999999999887655 689999999999864432211111 122222221 25688888
Q ss_pred EeCC-----CCCCCHHHHhccCcEEEecCCCHHHHHHHH
Q 001076 1095 ATNR-----PFDLDEAVVRRLPRRLMVNLPDAPNREKII 1128 (1163)
Q Consensus 1095 TTN~-----p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eIL 1128 (1163)
+|.. ...-+++|.||| ..|.+..|+.++-.+|+
T Consensus 157 atT~eey~~~~e~d~aL~rrF-~~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 157 ATTLDEYRQYIEKDAALERRF-QKVFVAEPSVEDTIAIL 194 (195)
T ss_dssp EECHHHHHHHTTTCHHHHTTE-EEEECCCCCHHHHHTTC
T ss_pred cCCHHHHHHHHHcCHHHHhcC-CEeecCCCCHHHHHHHh
Confidence 8854 246689999999 78999999999877765
No 27
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.38 E-value=1e-12 Score=148.16 Aligned_cols=210 Identities=19% Similarity=0.305 Sum_probs=129.2
Q ss_pred cccCcHHHHHHHHHHHHcccCChhh---hhc-------------CCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEE
Q 001076 950 DIGALENVKDTLKELVMLPLQRPEL---FCK-------------GQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1163)
Q Consensus 950 dI~Gleevk~~L~e~V~lpl~~pel---f~k-------------~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi 1013 (1163)
.|+||+++++.+..++..-++|... .++ .....|+.++||.||+|+|||.||++||+.++.+|+
T Consensus 18 ~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~~~~~~~i 97 (364)
T d1um8a_ 18 YVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPIA 97 (364)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEE
T ss_pred eecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcceeeeCCCCccHHHHHHHHHhhccccee
Confidence 3679999999998776432211100 000 011457788999999999999999999999999999
Q ss_pred EEecccccc-ccccch-HHHHHHHHHHH----hccCCeEEEEccccccccCCCCc--chHHHHHHHHHHHHHHhcCCcc-
Q 001076 1014 NISMSSITS-KWFGEG-EKYVKAVFSLA----SKIAPSVVFVDEVDSMLGRRENP--GEHEAMRKMKNEFMVNWDGLRT- 1084 (1163)
Q Consensus 1014 ~Id~seL~s-~~~Ge~-E~~Ir~lF~~A----~k~~PsILfIDEID~L~g~r~s~--~~~eal~~il~~LL~~Ldgl~~- 1084 (1163)
.+||+.++. .|+|.. +..+..+...+ ++.+.+|+++||||...+..... ....++..+.+.|++.+++...
T Consensus 98 r~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V~~~lLqild~~~~~ 177 (364)
T d1um8a_ 98 ISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIVEGSLVN 177 (364)
T ss_dssp EEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------CHHHHHHHHHHHHCCEEC
T ss_pred ehhhhhcccchhhHhhhccchhhhhhhchhHHHHhhcccchhhhhhhhccccccccccccccchHHHHhhhhhhcCceec
Confidence 999998764 355533 34455655543 45577999999999875432111 1112455677888888874211
Q ss_pred --------cCCCCEEEEEEeCC-------------------------------------------------CCCCCHHHH
Q 001076 1085 --------KDKERVLVLAATNR-------------------------------------------------PFDLDEAVV 1107 (1163)
Q Consensus 1085 --------k~~~~VlVIaTTN~-------------------------------------------------p~~Ld~aLl 1107 (1163)
.+..+.++|.|+|- +..+.|+|+
T Consensus 178 ~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~PEf~ 257 (364)
T d1um8a_ 178 IPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTYGLIPELI 257 (364)
T ss_dssp ---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHHHTTCCHHHH
T ss_pred cCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhhhhhhhccccHHHHhhhhhHHHHH
Confidence 11234555555543 123779999
Q ss_pred hccCcEEEecCCCHHHHHHHHHH----H-------HhhCCCC---ChhhHHHHHHHc--CCCCHHHHH
Q 001076 1108 RRLPRRLMVNLPDAPNREKIIRV----I-------LAKEELA---SDVDLEGIANMA--DGYSGSDLK 1159 (1163)
Q Consensus 1108 rRFd~vI~I~~Pd~eeR~eILk~----l-------l~k~~l~---~dvdl~~LA~~T--eGySgaDLk 1159 (1163)
.||+.++.|...+.++-.+|+.. + +...++. ++..++.||... ..|.+.-|+
T Consensus 258 gRi~~iv~f~~L~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~g~d~~~GAR~L~ 325 (364)
T d1um8a_ 258 GRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTGARGLR 325 (364)
T ss_dssp TTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHTTCTGGGHH
T ss_pred HHhcchhhHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEECHHHHHHHHHhccCCCCCchHHH
Confidence 99999999999999999999863 2 2223332 555677777654 245444443
No 28
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.30 E-value=5.7e-14 Score=158.51 Aligned_cols=154 Identities=17% Similarity=0.152 Sum_probs=99.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecccccccc-ccchHHHHHHHHHHH------hccCCeEEEEcccccccc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKW-FGEGEKYVKAVFSLA------SKIAPSVVFVDEVDSMLG 1057 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~s~~-~Ge~E~~Ir~lF~~A------~k~~PsILfIDEID~L~g 1057 (1163)
+++||+||||||||++|+++|+.++.+|+.+++++..+.+ ++........+|..| .+..|+++++||||.|
T Consensus 155 ~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~DeiD~l-- 232 (362)
T d1svma_ 155 RYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNLDNL-- 232 (362)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHHHHTT--
T ss_pred CeEEEECCCCCCHHHHHHHHHHHcCCCEEEEECcchhhHHHHHhHHHHHHHHHHHHHHhhhhccCCCCeEEEehHhhc--
Confidence 5899999999999999999999999999999988865542 332222222223222 1223445555555433
Q ss_pred CCCCcchHHHHHHHHHHHHHHhcCCcc-----cCCCCE-----EEEEEeCCCCCCCHHHH-hccCcEEEecCCCHHHHH-
Q 001076 1058 RRENPGEHEAMRKMKNEFMVNWDGLRT-----KDKERV-----LVLAATNRPFDLDEAVV-RRLPRRLMVNLPDAPNRE- 1125 (1163)
Q Consensus 1058 ~r~s~~~~eal~~il~~LL~~Ldgl~~-----k~~~~V-----lVIaTTN~p~~Ld~aLl-rRFd~vI~I~~Pd~eeR~- 1125 (1163)
...++|... +....+ .+|+|||... .+.++ .||+..+.+..|+...|.
T Consensus 233 ------------------~~~~dg~~~~~~~~~~~~~~~~~~~p~i~ttN~~~--~~~~r~~Rf~~~i~~~~~~~~~~~~ 292 (362)
T d1svma_ 233 ------------------RDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNEYS--VPKTLQARFVKQIDFRPKDYLKHCL 292 (362)
T ss_dssp ------------------HHHHHCSSCEEECCSSSCCEEECCCCEEEEECSCC--CCHHHHTTEEEEEECCCCHHHHHHH
T ss_pred ------------------ccccCCcchhhhhhhhhchhhhccCCceeeccccc--ccccccccCceEEeecCCCcHHHHH
Confidence 233333211 000111 3788999632 22233 299999999888877664
Q ss_pred HHHHHHHhhCCCCChhhHHHHHHHcCCCCHHHHHhhc
Q 001076 1126 KIIRVILAKEELASDVDLEGIANMADGYSGSDLKVDY 1162 (1163)
Q Consensus 1126 eILk~ll~k~~l~~dvdl~~LA~~TeGySgaDLk~Lv 1162 (1163)
+++..++.+..+. .+.+.|+.++.|++++|+..++
T Consensus 293 ~~l~~i~~~~~l~--~~~~~L~~li~~~s~~D~~~~i 327 (362)
T d1svma_ 293 ERSEFLLEKRIIQ--SGIALLLMLIWYRPVAEFAQSI 327 (362)
T ss_dssp HTCTHHHHTTCTT--CHHHHHHHHHHHSCGGGSCGGG
T ss_pred HHHHHHhcccCCC--CCHHHHHHHccCCCHHHHHHHH
Confidence 5666677766654 4557799999999999987764
No 29
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.29 E-value=4e-11 Score=125.33 Aligned_cols=188 Identities=19% Similarity=0.253 Sum_probs=121.4
Q ss_pred CCCccccc-C--cHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecc
Q 001076 945 GVTFDDIG-A--LENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1163)
Q Consensus 945 ~~tfddI~-G--leevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~s 1018 (1163)
..+|++++ | ...+...+++++..+ + ....+++|+||+|+|||+|+.|+++++ +..++.+++.
T Consensus 6 ~~tFdnF~vg~~N~~a~~~~~~~~~~~----------~--~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~ 73 (213)
T d1l8qa2 6 KYTLENFIVGEGNRLAYEVVKEALENL----------G--SLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSAD 73 (213)
T ss_dssp TCCSSSCCCCTTTHHHHHHHHHHHHTT----------T--TSCSSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred CCChhhccCCCcHHHHHHHHHHHHhCc----------C--CCCCcEEEECCCCCcHHHHHHHHHHHhccCccceEEechH
Confidence 46888854 4 445556666655421 1 112459999999999999999999988 6788888877
Q ss_pred ccccccccchH-HHHHHHHHHHhccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccCCCCEEEEEEeC
Q 001076 1019 SITSKWFGEGE-KYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATN 1097 (1163)
Q Consensus 1019 eL~s~~~Ge~E-~~Ir~lF~~A~k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN 1097 (1163)
++......... .....++.. .+ ...+|+|||||.+.++ ...+..+..+++.+.. ...-+||++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~-~~-~~dll~iDDi~~i~~~---~~~~~~lf~lin~~~~---------~~~~iiits~~ 139 (213)
T d1l8qa2 74 DFAQAMVEHLKKGTINEFRNM-YK-SVDLLLLDDVQFLSGK---ERTQIEFFHIFNTLYL---------LEKQIILASDR 139 (213)
T ss_dssp HHHHHHHHHHHHTCHHHHHHH-HH-TCSEEEEECGGGGTTC---HHHHHHHHHHHHHHHH---------TTCEEEEEESS
T ss_pred HHHHHHHHHHHccchhhHHHH-Hh-hccchhhhhhhhhcCc---hHHHHHHHHHHHHHhh---------ccceEEEecCC
Confidence 65543222111 111222222 22 3579999999988532 2334445555555542 24456666666
Q ss_pred CCCC---CCHHHHhccC--cEEEecCCCHHHHHHHHHHHHhhCCCC-ChhhHHHHHHHcCCCCHHHHHhh
Q 001076 1098 RPFD---LDEAVVRRLP--RRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKVD 1161 (1163)
Q Consensus 1098 ~p~~---Ld~aLlrRFd--~vI~I~~Pd~eeR~eILk~ll~k~~l~-~dvdl~~LA~~TeGySgaDLk~L 1161 (1163)
.|.. +.+.+.+||. .++.++ |+.++|.+|++.++...++. ++..++.|++++. +..||..+
T Consensus 140 ~p~~l~~~~~dL~SRL~~g~~~~i~-p~d~~~~~iL~~~a~~rgl~l~~~v~~yl~~~~~--~~R~L~~~ 206 (213)
T d1l8qa2 140 HPQKLDGVSDRLVSRFEGGILVEIE-LDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTK--NVREIEGK 206 (213)
T ss_dssp CGGGCTTSCHHHHHHHHTSEEEECC-CCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCS--SHHHHHHH
T ss_pred cchhccccchHHHHHhhCceEEEEC-CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHhcC--cHHHHHHH
Confidence 6644 4588988874 467776 67789999999999887765 6677888998874 46666543
No 30
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.28 E-value=4.3e-11 Score=124.31 Aligned_cols=172 Identities=16% Similarity=0.135 Sum_probs=118.3
Q ss_pred CcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCC----------------------
Q 001076 953 ALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGA---------------------- 1010 (1163)
Q Consensus 953 Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~---------------------- 1010 (1163)
.++++.+.|...+.. .+.+..+||+||+|+|||++|+.+|+.+..
T Consensus 6 w~~~~~~~l~~~~~~-------------~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~ 72 (207)
T d1a5ta2 6 WLRPDFEKLVASYQA-------------GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGT 72 (207)
T ss_dssp GGHHHHHHHHHHHHT-------------TCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTC
T ss_pred ccHHHHHHHHHHHHc-------------CCcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhcc
Confidence 466777777776642 344567999999999999999999998731
Q ss_pred --cEEEEeccccccccccchHHHHHHHHHHHhc----cCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcc
Q 001076 1011 --NFINISMSSITSKWFGEGEKYVKAVFSLASK----IAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRT 1084 (1163)
Q Consensus 1011 --pfi~Id~seL~s~~~Ge~E~~Ir~lF~~A~k----~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~ 1084 (1163)
.++.+....- ... -.-..++.+...+.. ....|++|||+|.|. ....+.|+..|+.
T Consensus 73 ~~~~~~~~~~~~-~~~--i~~~~ir~l~~~~~~~~~~~~~kviIide~d~l~------------~~a~n~Llk~lEe--- 134 (207)
T d1a5ta2 73 HPDYYTLAPEKG-KNT--LGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT------------DAAANALLKTLEE--- 134 (207)
T ss_dssp CTTEEEECCCTT-CSS--BCHHHHHHHHHHTTSCCTTSSCEEEEESCGGGBC------------HHHHHHHHHHHTS---
T ss_pred ccccchhhhhhc-ccc--cccchhhHHhhhhhhccccCccceEEechhhhhh------------hhhhHHHHHHHHh---
Confidence 1222221110 001 112345555554433 345699999999883 2344556666654
Q ss_pred cCCCCEEEEEEeCCCCCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhCCCCChhhHHHHHHHcCCCCHHHHHhh
Q 001076 1085 KDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKVD 1161 (1163)
Q Consensus 1085 k~~~~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~~l~~dvdl~~LA~~TeGySgaDLk~L 1161 (1163)
.+.++++|++|+.+..+.+++++|+ ..+.|..|+.++...+++.. .. .++..+..+++.++|--+.-|..|
T Consensus 135 -p~~~~~fIl~t~~~~~ll~tI~SRc-~~i~~~~~~~~~~~~~L~~~---~~-~~~~~~~~i~~~s~Gs~r~al~~l 205 (207)
T d1a5ta2 135 -PPAETWFFLATREPERLLATLRSRC-RLHYLAPPPEQYAVTWLSRE---VT-MSQDALLAALRLSAGSPGAALALF 205 (207)
T ss_dssp -CCTTEEEEEEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHH---CC-CCHHHHHHHHHHTTTCHHHHHHTT
T ss_pred -hcccceeeeeecChhhhhhhhccee-EEEecCCCCHHHHHHHHHHc---CC-CCHHHHHHHHHHcCCCHHHHHHHh
Confidence 3467999999999999999999999 79999999998887777542 22 356778889999988766666543
No 31
>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.27 E-value=8.3e-12 Score=120.93 Aligned_cols=97 Identities=25% Similarity=0.320 Sum_probs=79.9
Q ss_pred cceeccccCCCCceeee-------------cceeEEccCCccceeecC-CCCCccceEEEEeecCCcceEEEEEecCCce
Q 001076 134 WARLISQCSQNSHLSMT-------------GAVFTVGHNRQCDLYLKD-PSISKNLCRLRRIENGGPSGALLEITGGKGE 199 (1163)
Q Consensus 134 W~rL~s~~~~~p~~~i~-------------~~~~t~G~~~~cd~~l~d-~~~s~~~c~l~~~~~~g~~~a~le~~~~~G~ 199 (1163)
=|||+....++|...+. +..|||||+..||+.+.| +.+|..||+|... .++ .+++++.|+|||
T Consensus 5 ~~~l~~t~g~~p~~~L~~~~~~~~~~~~~~~~~~~iGR~~~~d~~l~d~~~VSr~Ha~i~~~-~~~--~~~~d~~S~NGT 81 (127)
T d1g6ga_ 5 VCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLG-EDG--NLLLNDISTNGT 81 (127)
T ss_dssp EEEEEESSSSSCCEEEEECHHHHHHCCSSCCEEEEEESSTTSSEECCSCTTSCSSCEEEEEC-TTS--CEEEEECCSSCC
T ss_pred EEEEEecCCCCCcEEEEecCCceeEEEecCCccEEEccCcccCccCCCcchhhHHHHHeeec-ccE--EEEEECCCccee
Confidence 47888888888865544 356999999999999986 6899999999864 233 378999999999
Q ss_pred EEEcCeecCCCceEEeeCCCEEEEccCC---CeeEEee
Q 001076 200 VEVNGNVHPKDSQVVLRGGDELVFSPSG---KHSYIFQ 234 (1163)
Q Consensus 200 v~vNg~~~~k~~~~~L~~gDev~f~~~~---~~ayifq 234 (1163)
+|||+++.++..++|++||+|.|+... -..|+++
T Consensus 82 -~vNg~~l~~~~~~~L~~GD~I~iG~~~~~~~v~~~~~ 118 (127)
T d1g6ga_ 82 -WLNGQKVEKNSNQLLSQGDEITVGVGVESDILSLVIF 118 (127)
T ss_dssp -EETTEECCTTCCEECCTTCEEEECTTSGGGCEEEEEE
T ss_pred -EECCEEecCCCEEEcCCCCEEEECCCCCCceEEEEEE
Confidence 699999999999999999999999764 3445443
No 32
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.26 E-value=8.6e-12 Score=141.58 Aligned_cols=179 Identities=22% Similarity=0.377 Sum_probs=115.3
Q ss_pred cccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh----------CCcEEEEec
Q 001076 948 FDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----------GANFINISM 1017 (1163)
Q Consensus 948 fddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eL----------g~pfi~Id~ 1017 (1163)
++.++|.++.++.+.+.+.. +...++||.|+||+|||.|+..+|+.. +..++.+|+
T Consensus 21 ld~~~gr~~ei~~~~~~L~r--------------~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~ 86 (387)
T d1qvra2 21 LDPVIGRDEEIRRVIQILLR--------------RTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQM 86 (387)
T ss_dssp SCCCCSCHHHHHHHHHHHHC--------------SSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC
T ss_pred CCCCcCcHHHHHHHHHHHhc--------------CCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeH
Confidence 45678999999999887752 122468999999999999999999875 467999999
Q ss_pred ccccc--ccccchHHHHHHHHHHHhccC-CeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccCCCCEEEEE
Q 001076 1018 SSITS--KWFGEGEKYVKAVFSLASKIA-PSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLA 1094 (1163)
Q Consensus 1018 seL~s--~~~Ge~E~~Ir~lF~~A~k~~-PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIa 1094 (1163)
..|.. .+.|+.+..+..++..+.... +.||||||++.|++.....+...+ .+.|.-.+ ....+.+|+
T Consensus 87 ~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~----a~~Lkp~L------~rg~~~~I~ 156 (387)
T d1qvra2 87 GSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDA----GNMLKPAL------ARGELRLIG 156 (387)
T ss_dssp -----------CHHHHHHHHHHHHHTTCSSEEEEECCC-----------------------HHHH------HTTCCCEEE
T ss_pred hhhhcccCcchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCCCCcccH----HHHHHHHH------hCCCcceee
Confidence 99885 567899999999999888775 688999999999865433222222 22222222 125688888
Q ss_pred EeCCC----CCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhC----CC-CChhhHHHHHHHcC
Q 001076 1095 ATNRP----FDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE----EL-ASDVDLEGIANMAD 1151 (1163)
Q Consensus 1095 TTN~p----~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~----~l-~~dvdl~~LA~~Te 1151 (1163)
+|..- ..=|++|.||| ..|.|..|+.++-..|++.+.... ++ ..+..+.....+++
T Consensus 157 ~tT~~ey~~~e~d~al~rrF-~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ 221 (387)
T d1qvra2 157 ATTLDEYREIEKDPALERRF-QPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSH 221 (387)
T ss_dssp EECHHHHHHHTTCTTTCSCC-CCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHH
T ss_pred ecCHHHHHHhcccHHHHHhc-ccccCCCCcHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHhcc
Confidence 88531 23478999999 689999999999999999877653 23 24444555555544
No 33
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.24 E-value=1.1e-10 Score=121.88 Aligned_cols=183 Identities=14% Similarity=0.077 Sum_probs=119.4
Q ss_pred ccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh----CCcEEEEecccccc--
Q 001076 949 DDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----GANFINISMSSITS-- 1022 (1163)
Q Consensus 949 ddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eL----g~pfi~Id~seL~s-- 1022 (1163)
+.++|.+..++.+.+++...+.++ ..++.++||+||||||||++|+++++.+ ++.++.+++.....
T Consensus 16 ~~l~~Re~ei~~l~~~l~~~l~~~--------~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 87 (276)
T d1fnna2 16 KRLPHREQQLQQLDILLGNWLRNP--------GHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFT 87 (276)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHST--------TSSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCSHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCC--------CCCCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecchhhhhhh
Confidence 467899999999988886533322 2345789999999999999999999998 46677777654221
Q ss_pred --------------ccccchHH-HHHHHHHHH-hccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccC
Q 001076 1023 --------------KWFGEGEK-YVKAVFSLA-SKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKD 1086 (1163)
Q Consensus 1023 --------------~~~Ge~E~-~Ir~lF~~A-~k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~ 1086 (1163)
...+.... ....+.... ......++++|++|.+. .........+ +.......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---------~~~~~~~~~~---~~~~~~~~ 155 (276)
T d1fnna2 88 AIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLA---------PDILSTFIRL---GQEADKLG 155 (276)
T ss_dssp HHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSC---------HHHHHHHHHH---TTCHHHHS
T ss_pred hhhhhhHHhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhh---------hhhhhhHHHH---Hhcccccc
Confidence 11111122 223333333 33456788899999763 1111111222 22222223
Q ss_pred CCCEEEEEEeCCC---CCCCHHHHhcc-CcEEEecCCCHHHHHHHHHHHHhhC---CCCChhhHHHHHHHcC
Q 001076 1087 KERVLVLAATNRP---FDLDEAVVRRL-PRRLMVNLPDAPNREKIIRVILAKE---ELASDVDLEGIANMAD 1151 (1163)
Q Consensus 1087 ~~~VlVIaTTN~p---~~Ld~aLlrRF-d~vI~I~~Pd~eeR~eILk~ll~k~---~l~~dvdl~~LA~~Te 1151 (1163)
..++.+|++++.. +.+++.+.+|+ ...|.|+.|+.+++.+|++..+... ...++..++.|+..+.
T Consensus 156 ~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~ 227 (276)
T d1fnna2 156 AFRIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITG 227 (276)
T ss_dssp SCCEEEEEEESSTHHHHTSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHS
T ss_pred ccceEEeecCCchhhhhhcchhhhhhhcchhccccchhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHhh
Confidence 4678888888874 56778888875 3568999999999999999887652 2245666788888774
No 34
>d1dmza_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.24 E-value=8.7e-12 Score=125.11 Aligned_cols=92 Identities=18% Similarity=0.285 Sum_probs=76.7
Q ss_pred cceeccccC--CCCceeeec--ceeEEccCCccceeecCCCCCccceEEEEeec-----------CCcceEEEEEecCCc
Q 001076 134 WARLISQCS--QNSHLSMTG--AVFTVGHNRQCDLYLKDPSISKNLCRLRRIEN-----------GGPSGALLEITGGKG 198 (1163)
Q Consensus 134 W~rL~s~~~--~~p~~~i~~--~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~-----------~g~~~a~le~~~~~G 198 (1163)
|-.|.+... ...++.|.. ..|+|||+..||+.++++.+|..||.|..... .+...+||+|.|+||
T Consensus 5 f~~L~~l~~~~~~~~i~i~~~~~~~~iGR~~~~d~~i~~~~vS~~H~~I~~~~~~~~~~~~~~~~~~~~~~~l~D~S~NG 84 (158)
T d1dmza_ 5 FLTLKPLPDSIIQESLEIQQGVNPFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHTGTNV 84 (158)
T ss_dssp CEEEEECTTSSCCCCEEETTSCSCEEEESSTTSSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEECSTTC
T ss_pred eEEEEEccCCCcceeEEEccCCCcEEecCCcCccEEECCCcccCcceEEEEeccccccccccccccCCCcEEEEecCCCC
Confidence 566766643 345788875 46999999999999999999999999987631 223468999999999
Q ss_pred eEEEcCeecCCCceEEeeCCCEEEEccC
Q 001076 199 EVEVNGNVHPKDSQVVLRGGDELVFSPS 226 (1163)
Q Consensus 199 ~v~vNg~~~~k~~~~~L~~gDev~f~~~ 226 (1163)
| +|||++++|+.++.|++||+|.|+..
T Consensus 85 t-~vN~~~~~~~~~~~l~~gD~i~~~~~ 111 (158)
T d1dmza_ 85 S-YLNNNRMIQGTKFLLQDGDEIKIIWD 111 (158)
T ss_dssp C-EETTEECCSSEEEECCSSCCEESCCC
T ss_pred e-EECCEEcCCCceEECCCCCEEEEccC
Confidence 9 79999999999999999999999654
No 35
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.22 E-value=9.1e-11 Score=135.26 Aligned_cols=200 Identities=24% Similarity=0.339 Sum_probs=128.5
Q ss_pred ccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecccccc-ccccch-
Q 001076 951 IGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITS-KWFGEG- 1028 (1163)
Q Consensus 951 I~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~s-~~~Ge~- 1028 (1163)
|+||+++|+.+.-++...++|..+-......-.+++|||.||+|||||+||+.||+.+++||+.+|+..++. .|+|.-
T Consensus 16 VvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~fTeaGYvG~DV 95 (443)
T d1g41a_ 16 IIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEV 95 (443)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGGC----CCCCT
T ss_pred ccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHHHhCCCEEEeecceeeecceeecch
Confidence 679999999998887654332221111111223578999999999999999999999999999999988763 244432
Q ss_pred HHHHHHHHHHHh--------------------------------------------------------------------
Q 001076 1029 EKYVKAVFSLAS-------------------------------------------------------------------- 1040 (1163)
Q Consensus 1029 E~~Ir~lF~~A~-------------------------------------------------------------------- 1040 (1163)
+..++.+.+.|.
T Consensus 96 esii~~L~~~a~~~v~~~e~~~V~~~~~~~~~e~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~G~~~~~~~~~~ 175 (443)
T d1g41a_ 96 DSIIRDLTDSAMKLVRQQEIAKNRARAEDVAEERILDALLPPAKNQWGEVENHDSHSSTRQAFRKKLREGQLDDKEIEID 175 (443)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCC--------------------------------------------------------
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhHHHHHHHhcCCccccccccc
Confidence 222333221110
Q ss_pred -----------------------------------------------------------------------ccCCeEEEE
Q 001076 1041 -----------------------------------------------------------------------KIAPSVVFV 1049 (1163)
Q Consensus 1041 -----------------------------------------------------------------------k~~PsILfI 1049 (1163)
-...+++|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~i~~~ai~~v~~~~~~~~ 255 (443)
T d1g41a_ 176 VSAGVSMGVEIMAPPGMEEMTNQLQSLFQNLGSDKTKKRKMKIKDALKALIDDEAAKLINPEELKQKAIDAVEQNGIVFI 255 (443)
T ss_dssp -------------------------------------------------CCGGGSCSSCCHHHHHHHHHHHHHHHCEEEE
T ss_pred cccCCCcccccccccchhhhhhhHHHhhhccCCccccceeeehHHHHHHHHHHHhhhccchhHHHHHHHHHHhccCcccc
Confidence 001347889
Q ss_pred ccccccccCCCCcchHHHHHHHHHHHHHHhcCCccc------CCCCEEEEEEeCC----CCCCCHHHHhccCcEEEecCC
Q 001076 1050 DEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK------DKERVLVLAATNR----PFDLDEAVVRRLPRRLMVNLP 1119 (1163)
Q Consensus 1050 DEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k------~~~~VlVIaTTN~----p~~Ld~aLlrRFd~vI~I~~P 1119 (1163)
||++.........+.......+...++..+.+.... ....+++|++... +..|-|+|.-||+.++.+...
T Consensus 256 dei~k~~~~~~~~g~d~~~eg~~~~ll~~~e~~~v~~~~~~~~~~~~l~i~~~~~~~~~~~gliPEliGRlPi~v~L~~L 335 (443)
T d1g41a_ 256 DEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTAL 335 (443)
T ss_dssp ETGGGGSCCSSCSSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEECCSSCCGGGSCHHHHTTCCEEEECCCC
T ss_pred chhhhhhhcccCCCCCcccchhhhhhhhhccccccccccccccccchhhccccchhhcccccchhhhccceEEEEEccCc
Confidence 999988765544433333334445555555443221 2356778877643 556789999999999999999
Q ss_pred CHHHHHHHHHH----HH-------hhCCCC---ChhhHHHHHHHc
Q 001076 1120 DAPNREKIIRV----IL-------AKEELA---SDVDLEGIANMA 1150 (1163)
Q Consensus 1120 d~eeR~eILk~----ll-------~k~~l~---~dvdl~~LA~~T 1150 (1163)
+.++-.+|+.. ++ ...++. .+..++.||+++
T Consensus 336 ~~~dL~rILtEPknsLikQy~~lf~~~gv~L~ft~~al~~iA~~A 380 (443)
T d1g41a_ 336 SAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAA 380 (443)
T ss_dssp CHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhhhhHHHHHHHHHhhcCcEEEEcHHHHHHHHHHH
Confidence 99999888742 22 222322 556678887766
No 36
>d2brfa1 b.26.1.2 (A:8-108) Polynucleotide kinase 3'-phosphatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=2.5e-11 Score=113.14 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=70.9
Q ss_pred ceecccc--CCCCceeee--cceeEEccCCccceeecCCCCCccceEEEEeecCCcceEEEEEecCCceEEEcCeecCCC
Q 001076 135 ARLISQC--SQNSHLSMT--GAVFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEITGGKGEVEVNGNVHPKD 210 (1163)
Q Consensus 135 ~rL~s~~--~~~p~~~i~--~~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~~~~G~v~vNg~~~~k~ 210 (1163)
||||=++ ...|.+.+. ...++|||+..|+ +.|+.+|..||+|+....++. +++++.|+||| +|||+++.|+
T Consensus 1 grl~l~~p~g~~p~i~l~~~~~~~~iGR~~~~~--i~d~~vSr~Ha~i~~~~~~~~--~~v~~~s~Ngt-~vNg~~l~~~ 75 (101)
T d2brfa1 1 GRLWLESPPGEAPPIFLPSDGQALVLGRGPLTQ--VTDRKCSRTQVELVADPETRT--VAVKQLGVNPS-TTGTQELKPG 75 (101)
T ss_dssp CEEEEECSTTSSCCEECCSTTCCEEECSBTTTT--BCCTTSCSSCEEEEEETTTTE--EEEEECSSSCC-EEC-CBCCTT
T ss_pred CeEEEEecCCCCCcEEEecCCCeEEcccCcccc--ccCCCcChhheEEEeccCcee--EEEEcCCCcce-EEEEEEeccc
Confidence 3444444 466766654 6789999976655 589999999999986544443 78999999999 6999999999
Q ss_pred ceEEeeCCCEEEEccCCCeeEE
Q 001076 211 SQVVLRGGDELVFSPSGKHSYI 232 (1163)
Q Consensus 211 ~~~~L~~gDev~f~~~~~~ayi 232 (1163)
+.+.|++||+|.++ .+++-|+
T Consensus 76 ~~~~L~~GD~i~l~-~~~~~y~ 96 (101)
T d2brfa1 76 LEGSLGVGDTLYLV-NGLHPLT 96 (101)
T ss_dssp CEEEEETTCEEEEE-TTEEEEE
T ss_pred eeeECCCCCEEEEc-CCeEEEE
Confidence 99999999999996 3444444
No 37
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.20 E-value=1.8e-11 Score=135.26 Aligned_cols=163 Identities=22% Similarity=0.336 Sum_probs=96.8
Q ss_pred CCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhC----------------
Q 001076 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG---------------- 1009 (1163)
Q Consensus 946 ~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg---------------- 1009 (1163)
..|.+|+|++.+++.|.-.+..+ + ..+|||+||||||||+||++++.-+.
T Consensus 4 ~~f~~I~Gq~~~kral~laa~~~---------~-----~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~ 69 (333)
T d1g8pa_ 4 FPFSAIVGQEDMKLALLLTAVDP---------G-----IGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVE 69 (333)
T ss_dssp CCGGGSCSCHHHHHHHHHHHHCG---------G-----GCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGG
T ss_pred CChhhccCcHHHHHHHHHHHhcc---------C-----CCeEEEECCCCccHHHHHHHHHHhCCCchhhccCccccCccc
Confidence 46899999999999876544320 1 14799999999999999999998761
Q ss_pred -----------------CcEEEEeccccccccccch--HHHHH--------HHHHHHhccCCeEEEEccccccccCCCCc
Q 001076 1010 -----------------ANFINISMSSITSKWFGEG--EKYVK--------AVFSLASKIAPSVVFVDEVDSMLGRRENP 1062 (1163)
Q Consensus 1010 -----------------~pfi~Id~seL~s~~~Ge~--E~~Ir--------~lF~~A~k~~PsILfIDEID~L~g~r~s~ 1062 (1163)
.+++......-.+..+|.. +.... ..+..| ..+|+|||||+++ ++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A---~~gvl~iDEi~~~-----~~ 141 (333)
T d1g8pa_ 70 MIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARA---NRGYLYIDECNLL-----ED 141 (333)
T ss_dssp GSCTTCCCSCCCEEEECCCEEEECTTCCHHHHHCEECHHHHHHHCGGGEECCHHHHH---TTEEEEETTGGGS-----CH
T ss_pred cccchhhccccCcccccCceeeccCCCCcccccCcchhhhccccCcceeeccccccc---cccEeecccHHHH-----HH
Confidence 1112111111111111110 00000 122222 2489999999976 32
Q ss_pred chHHHHHHHHHHHHHHh--cCCcccCCCCEEEEEEeCCC-CCCCHHHHhccCcEEEecCC-CHHHHHHHHHH
Q 001076 1063 GEHEAMRKMKNEFMVNW--DGLRTKDKERVLVLAATNRP-FDLDEAVVRRLPRRLMVNLP-DAPNREKIIRV 1130 (1163)
Q Consensus 1063 ~~~eal~~il~~LL~~L--dgl~~k~~~~VlVIaTTN~p-~~Ld~aLlrRFd~vI~I~~P-d~eeR~eILk~ 1130 (1163)
..++++...+++-...+ .|....-+.++++|+|+|+. ..+.+++++||+..+.+..| +...|.++...
T Consensus 142 ~~~~aLl~~me~~~v~i~r~g~~~~~p~~f~liaa~Np~~~~l~~~llDRf~~~i~v~~~~~~~~~~~~~~~ 213 (333)
T d1g8pa_ 142 HIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRR 213 (333)
T ss_dssp HHHHHHHHHHHHSEEEECCTTCCEEEECCEEEEEEECSCSCCCCHHHHTTCSEEEECCCCCSHHHHHHHHHH
T ss_pred HHHHHHhhhhcCCeEEecccCceecCCCCEEEEEecCccccccccchhhhhcceeeccCcchhhHHHHHHHh
Confidence 23333333332221111 23333335689999999974 57999999999988888766 45666555543
No 38
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.17 E-value=6e-11 Score=124.71 Aligned_cols=195 Identities=14% Similarity=0.033 Sum_probs=118.7
Q ss_pred ccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhC---------CcEEEEeccc
Q 001076 949 DDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG---------ANFINISMSS 1019 (1163)
Q Consensus 949 ddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg---------~pfi~Id~se 1019 (1163)
+.+.|.+..++.|.+++..++.+ ...-..+...++|+||||||||++++++++++. +.+..+++..
T Consensus 16 ~~~~~Re~e~~~l~~~l~~~~~~-----~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 90 (287)
T d1w5sa2 16 PELRVRRGEAEALARIYLNRLLS-----GAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFN 90 (287)
T ss_dssp SSCSSSCHHHHHHHHHHHHHHHT-----SSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHc-----CCCCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeecccc
Confidence 46778888888888876543321 111111222467889999999999999999872 4455566544
Q ss_pred cccc----------------cccchHHHHHHHH-HHHh-ccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcC
Q 001076 1020 ITSK----------------WFGEGEKYVKAVF-SLAS-KIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDG 1081 (1163)
Q Consensus 1020 L~s~----------------~~Ge~E~~Ir~lF-~~A~-k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldg 1081 (1163)
.... ..+.....+...+ .... ...+.++++||+|.+....... .+.. ..+..++..+..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~--~~~~-~~l~~l~~~l~~ 167 (287)
T d1w5sa2 91 APNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIA--AEDL-YTLLRVHEEIPS 167 (287)
T ss_dssp CCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSC--HHHH-HHHHTHHHHSCC
T ss_pred ccchhhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEeccccccc--hhHH-HHHHHHHHhcch
Confidence 2211 1122333333333 3333 2345788999999986544322 1111 122233333333
Q ss_pred CcccCCCCEEEEEEeCCCCC------CCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhCC---CCChhhHHHHHHHcCC
Q 001076 1082 LRTKDKERVLVLAATNRPFD------LDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEE---LASDVDLEGIANMADG 1152 (1163)
Q Consensus 1082 l~~k~~~~VlVIaTTN~p~~------Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~~---l~~dvdl~~LA~~TeG 1152 (1163)
.. ....+.+|+.+|.++. ..+.+.+||...++++.++.++..+|++..++... ..++..++.+|+++..
T Consensus 168 ~~--~~~~~~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~~~~~ 245 (287)
T d1w5sa2 168 RD--GVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISDVYGE 245 (287)
T ss_dssp TT--SCCBEEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHHCG
T ss_pred hh--cccceeEEeecccHHHHHHHHhhccchhcccceeeeccCCcHHHHHHHHhhhHHHhhccCCCCHHHHHHHHHHHhc
Confidence 32 2355666766665432 33677789999999999999999999998876522 2355668889988865
Q ss_pred C
Q 001076 1153 Y 1153 (1163)
Q Consensus 1153 y 1153 (1163)
|
T Consensus 246 ~ 246 (287)
T d1w5sa2 246 D 246 (287)
T ss_dssp G
T ss_pred c
Confidence 4
No 39
>d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=9.7e-11 Score=113.35 Aligned_cols=101 Identities=19% Similarity=0.219 Sum_probs=80.8
Q ss_pred ccceeccccCCCCceeee-cceeEEccCCccceeecCCC----CCccceEEEEeecCCcceEEEEEe-cCCceEEEcCee
Q 001076 133 PWARLISQCSQNSHLSMT-GAVFTVGHNRQCDLYLKDPS----ISKNLCRLRRIENGGPSGALLEIT-GGKGEVEVNGNV 206 (1163)
Q Consensus 133 pW~rL~s~~~~~p~~~i~-~~~~t~G~~~~cd~~l~d~~----~s~~~c~l~~~~~~g~~~a~le~~-~~~G~v~vNg~~ 206 (1163)
+|+ |......-..+.+. +..+||||+..||+.|+++. ||..||+|...+ +|. ++|.|. |.||| +|||..
T Consensus 5 ~w~-L~r~g~~~~~~~l~~~~~~tiGR~~~~~~~l~~~~~~~~VSR~Ha~i~~~~-~g~--~~l~D~~S~NGt-~lNg~~ 79 (127)
T d2piea1 5 SWC-LRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNP-EGQ--WTIMDNKSLNGV-WLNRAR 79 (127)
T ss_dssp EEE-EEETTCSSCBEEECTTCCEEEESSSSSSEECCCSSCTTSSCSSCEEEEECT-TSC--EEEEECSCSSCE-EETTEE
T ss_pred eEE-EEEccCCCCeEEcCCCCEEEeccCCCccEEECCCCcccccchhheEEEECC-CCe--EEEEECCCcCCe-EECCEE
Confidence 674 34444455556664 68899999999999999986 899999999653 344 678887 79998 799999
Q ss_pred cCCCceEEeeCCCEEEEccC----CCeeEEeeecCc
Q 001076 207 HPKDSQVVLRGGDELVFSPS----GKHSYIFQQLSD 238 (1163)
Q Consensus 207 ~~k~~~~~L~~gDev~f~~~----~~~ayifq~l~~ 238 (1163)
+.+++.+.|+.||.|.|+.+ .+..|.|+.+..
T Consensus 80 l~~~~~~~L~~GD~I~iG~p~~~~~~~~f~~~~~~~ 115 (127)
T d2piea1 80 LEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVTEE 115 (127)
T ss_dssp CCTTCCEECCTTCEEEESCCCTTCSSCSEEEEEEEE
T ss_pred ccCCceeEcCCCCEEEeCCCCCCCcceEEEEEeCcc
Confidence 99999999999999999865 456788886543
No 40
>d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.11 E-value=1.7e-10 Score=106.88 Aligned_cols=91 Identities=20% Similarity=0.288 Sum_probs=73.7
Q ss_pred ccceeccccCCCCceeeecceeEEccCCccceeecCCCCCccceEEEEeecCCcceEEEEEe-cCCceEEEcCeecCCCc
Q 001076 133 PWARLISQCSQNSHLSMTGAVFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEIT-GGKGEVEVNGNVHPKDS 211 (1163)
Q Consensus 133 pW~rL~s~~~~~p~~~i~~~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~-~~~G~v~vNg~~~~k~~ 211 (1163)
+++.|....+. ...++....++|||+..||+.++|+.+|..||+|... ++. .+|+|. |.||| +|||+++.+
T Consensus 5 ~~~~l~~~~~G-~~~~l~~~~~~IGR~~~~di~l~d~~VSr~Ha~i~~~--~~~--~~i~Dl~S~nGt-~vNg~~i~~-- 76 (99)
T d2ff4a3 5 AVAYLHDIASG-RGYPLQAAATRIGRLHDNDIVLDSANVSRHHAVIVDT--GTN--YVINDLRSSNGV-HVQHERIRS-- 76 (99)
T ss_dssp CCCEEEETTTC-CEEECCSSEEEEESSTTSSEECCCTTSCTTCEEEEEC--SSC--EEEEECSCSSCC-EETTEECSS--
T ss_pred cEEEEEcCCCC-CEEEECCCCEEEeeCcCCCEEECCccccceeEEEEEe--CCE--EEEEECCCcCCC-eECCEEcCC--
Confidence 55555554433 3567788999999999999999999999999999864 333 789996 67899 699999964
Q ss_pred eEEeeCCCEEEEccCCCeeEEee
Q 001076 212 QVVLRGGDELVFSPSGKHSYIFQ 234 (1163)
Q Consensus 212 ~~~L~~gDev~f~~~~~~ayifq 234 (1163)
.++|++||+|.|+ ..-+.|+
T Consensus 77 ~~~L~~Gd~i~iG---~~~~~f~ 96 (99)
T d2ff4a3 77 AVTLNDGDHIRIC---DHEFTFQ 96 (99)
T ss_dssp EEEECTTCEEEET---TEEEEEE
T ss_pred ceECCCCCEEEEC---CEEEEEE
Confidence 6899999999995 5677776
No 41
>d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=4.3e-10 Score=103.70 Aligned_cols=82 Identities=24% Similarity=0.467 Sum_probs=69.7
Q ss_pred CCceeeecceeEEccCCccceeecCCCCCccceEEEEeecCCcceEEEEEecCC-ceEEEcCeecCCCceEEeeCCCEEE
Q 001076 144 NSHLSMTGAVFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEITGGK-GEVEVNGNVHPKDSQVVLRGGDELV 222 (1163)
Q Consensus 144 ~p~~~i~~~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~~~~-G~v~vNg~~~~k~~~~~L~~gDev~ 222 (1163)
-+..+|....|+|||+..||+.|+|+.+|..||+|...+ +. ++|++.++. |+ +|||+.+.+ .++|..||+|.
T Consensus 15 g~~~~L~~~~~~IGr~~~~di~l~~~~is~~Ha~i~~~~--~~--~~i~d~~s~ng~-~vNg~~l~~--~~~L~~Gd~I~ 87 (98)
T d2affa1 15 GPHFPLSLSTCLFGRGIECDIRIQLPVVSKQHCKIEIHE--QE--AILHNFSSTNPT-QVNGSVIDE--PVRLKHGDVIT 87 (98)
T ss_dssp EEEEECCSSEEEEESSTTSSEEECCTTSCSSBEEEEECS--SC--EEEEECCSSSCC-EETTEECSS--CEEECTTCEEE
T ss_pred ceEEEECCCCEEEeeCCCCCEEeCCCCcCceeEEEEEeC--CE--EEEEECCCcccc-eECCEECCC--ceECCCCCEEE
Confidence 346778889999999999999999999999999999763 33 889998764 66 899999965 48999999999
Q ss_pred EccCCCeeEEeee
Q 001076 223 FSPSGKHSYIFQQ 235 (1163)
Q Consensus 223 f~~~~~~ayifq~ 235 (1163)
|+ ++.|.|++
T Consensus 88 iG---~~~~~fe~ 97 (98)
T d2affa1 88 II---DRSFRYEN 97 (98)
T ss_dssp ET---TEEEEEEE
T ss_pred EC---CEEEEEEe
Confidence 95 77888874
No 42
>d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.01 E-value=3.2e-10 Score=108.21 Aligned_cols=76 Identities=24% Similarity=0.350 Sum_probs=64.6
Q ss_pred cceeEEccC-CccceeecCCCCCccceEEEEeecCCcceEEEEEe-cCCceEEEcCeecCCCceEEeeCCCEEEEccCCC
Q 001076 151 GAVFTVGHN-RQCDLYLKDPSISKNLCRLRRIENGGPSGALLEIT-GGKGEVEVNGNVHPKDSQVVLRGGDELVFSPSGK 228 (1163)
Q Consensus 151 ~~~~t~G~~-~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~-~~~G~v~vNg~~~~k~~~~~L~~gDev~f~~~~~ 228 (1163)
+..|+|||+ ..||+.|+|+.+|..||+|... ++. .+|+|. |.||| ||||+++..++.++|++||+|.|+..
T Consensus 32 ~~~~~iGR~~~~~di~l~d~~VSr~Ha~i~~~--~~~--~~i~Dl~S~nGT-~vng~~l~~~~~~~L~~Gd~i~lG~~-- 104 (118)
T d1uhta_ 32 GSTIRVGRIVRGNEIAIKDAGISTKHLRIESD--SGN--WVIQDLGSSNGT-LLNSNALDPETSVNLGDGDVIKLGEY-- 104 (118)
T ss_dssp TCCEEEESSSTTCSEECCSSSSCTTCEEEEEC--SSS--EEEECCCCSSCC-EESSSBCCTTCEEECCTTEEEEETTT--
T ss_pred CCEEEECCCCcCCeEEeCccCcchheeEEEEE--CCE--EEEEECCCccee-EECCEEcCCCcEEECCCCCEEEECCE--
Confidence 467999997 5899999999999999999875 333 889996 78999 69999999999999999999999643
Q ss_pred eeEEee
Q 001076 229 HSYIFQ 234 (1163)
Q Consensus 229 ~ayifq 234 (1163)
.++|-
T Consensus 105 -~~~~v 109 (118)
T d1uhta_ 105 -TSILV 109 (118)
T ss_dssp -EEEEE
T ss_pred -EEEEE
Confidence 44554
No 43
>d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.93 E-value=7.9e-10 Score=106.00 Aligned_cols=73 Identities=21% Similarity=0.169 Sum_probs=62.6
Q ss_pred eeEEccCCccceeecCCCCCccceEEEEeecCCcceEEEEEe-cCCceEEEcCeecCC--------CceEEeeCCCEEEE
Q 001076 153 VFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEIT-GGKGEVEVNGNVHPK--------DSQVVLRGGDELVF 223 (1163)
Q Consensus 153 ~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~-~~~G~v~vNg~~~~k--------~~~~~L~~gDev~f 223 (1163)
.|+|||+..||+.|+|+.+|..||+|......+. .+++|. |+||| +|||+++.+ +..+.|+.||+|.|
T Consensus 31 ~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~~~~--~~v~DlgS~nGT-~vNg~~i~~~~~~~~~~g~~~~L~~gd~i~i 107 (122)
T d1mzka_ 31 PVKLGRVSPSDLALKDSEVSGKHAQITWNSTKFK--WELVDMGSLNGT-LVNSHSISHPDLGSRKWGNPVELASDDIITL 107 (122)
T ss_dssp SEEEESSSSCSEECCCTTSSSEEEEEEEETTTTE--EEEEETTCSSCC-EETTEESSCCCTTTCCCCCCEECCTTEEEEC
T ss_pred CEEecCCCCCCEEECCCCcCccceEEEEeCCCCE--EEEeeCCCCCce-EECCEECcccccccccCCceEEcCCCCEEEE
Confidence 4899999999999999999999999997644444 778888 57999 799999965 45689999999999
Q ss_pred ccCCC
Q 001076 224 SPSGK 228 (1163)
Q Consensus 224 ~~~~~ 228 (1163)
+...+
T Consensus 108 G~~~~ 112 (122)
T d1mzka_ 108 GTTTK 112 (122)
T ss_dssp SSSCE
T ss_pred CCeEE
Confidence 88755
No 44
>d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.83 E-value=6.4e-09 Score=96.38 Aligned_cols=80 Identities=23% Similarity=0.363 Sum_probs=64.6
Q ss_pred eecceeEEccCCccceeecCCCCCccceEEEEeecCCcceEEEEEecC-CceEEEcCeecCCCceEEeeCCCEEEEccCC
Q 001076 149 MTGAVFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEITGG-KGEVEVNGNVHPKDSQVVLRGGDELVFSPSG 227 (1163)
Q Consensus 149 i~~~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~~~-~G~v~vNg~~~~k~~~~~L~~gDev~f~~~~ 227 (1163)
+....++||| ..||+.|.++.+|..||.|.....+.....++++.++ +|| +|||++|.. ++.|+.||+|.|+.
T Consensus 21 l~~~~~~iGr-~~~dI~l~~~~vs~~Ha~i~~~~~~~~~~~~i~d~~s~~gt-~VNg~~i~~--~~~L~~gD~I~~G~-- 94 (102)
T d2g1la1 21 IKDGVTRVGQ-VDMDIKLTGQFIREQHCLFRSIPQPDGEVVVTLEPCEGAET-YVNGKLVTE--PLVLKSGNRIVMGK-- 94 (102)
T ss_dssp CCSEEEEEES-SSCSEECCCTTCCSEEEEEEEEECTTSCEEEEEEECTTCCE-EETTEECCS--CEECCTTCEEEETT--
T ss_pred cCCCcEECCC-CCcCEEecccceeeeeeEEEEEEcCCCcEEEEecCCCCCCe-EECCeEccc--eeEcCCCCEEEECC--
Confidence 4578999999 6899999999999999999887655444456666554 577 799999964 69999999999974
Q ss_pred CeeEEee
Q 001076 228 KHSYIFQ 234 (1163)
Q Consensus 228 ~~ayifq 234 (1163)
.+.|.|.
T Consensus 95 ~~~frf~ 101 (102)
T d2g1la1 95 NHVFRFN 101 (102)
T ss_dssp TEEEEEE
T ss_pred CEEEEEc
Confidence 4567775
No 45
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.81 E-value=2.3e-10 Score=123.64 Aligned_cols=170 Identities=19% Similarity=0.279 Sum_probs=142.7
Q ss_pred HHHHHHHHHHhhccCCCeEE--------------------------------EEcchhhhhcC---ChhhHHHHHHHHhc
Q 001076 689 AINELFEVALNESKSSPLIV--------------------------------FVKDIEKSLTG---NNDAYGALKSKLEN 733 (1163)
Q Consensus 689 ~l~~l~evl~~e~k~~P~II--------------------------------ffddid~~La~---~~~~~~~i~s~L~~ 733 (1163)
-++++.++|.+..|++|++| |.-|+..++|| +++|..+++..+..
T Consensus 26 Ei~~l~~iL~r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~liag~~~~g~~e~r~~~i~~~ 105 (268)
T d1r6bx2 26 ELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 105 (268)
T ss_dssp HHHHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---CCCCCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeechHhccCccchhHHHHHHHHHHH
Confidence 49999999999889999998 88889999986 89999999999998
Q ss_pred C--CCCEEEEEeccccccccccCCCCCceeeccCCchhhhccccCCCCccccccccccchHHHHHhhhccccceeecCCc
Q 001076 734 L--PSNVVVIGSHTQLDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQ 811 (1163)
Q Consensus 734 L--~g~VivIgs~~~~d~~~~~~~~~~~~~~~~~~~~~~lldp~~pd~~~~~~~r~~~~~~~~~~l~~lf~~~i~i~~P~ 811 (1163)
+ .|++|+++...|+-.+.+.+.||++ ++.++|+|. +.+|+.+| |+.+++.+++..+..
T Consensus 106 ~~~~~~iIlfiDeih~l~~~g~~~g~~~-------d~a~~Lkp~----L~rg~i~v---------IgatT~eey~~~~e~ 165 (268)
T d1r6bx2 106 LEQDTNSILFIDEIHTIIGAGAASGGQV-------DAANLIKPL----LSSGKIRV---------IGSTTYQEFSNIFEK 165 (268)
T ss_dssp HSSSSCEEEEETTTTTTTTSCCSSSCHH-------HHHHHHSSC----SSSCCCEE---------EEEECHHHHHCCCCC
T ss_pred hhccCCceEEecchHHHhcCCCCCCccc-------cHHHHhhHH----HhCCCCeE---------EEeCCHHHHHHHHhh
Confidence 8 6799999999999998888888878 889999995 88999999 999999999999999
Q ss_pred hhHHHHHHHH------HHHHhhhhhhc-cchhhHHHhh-hhcCCC-CcccccchhhcccCCchhhhhhHHhHHhhhh
Q 001076 812 DEALLSDWKQ------QLERDVETLKG-QSNIISIRSV-LSRNGL-DCVDLESLCIKDQTLTTEGVEKIVGWALSHH 879 (1163)
Q Consensus 812 DeALlRRfer------q~e~~Lpdlkg-R~~Il~IHT~-l~~~~L-~~vdLeeLa~~tkg~sgadIe~Lv~~Aas~A 879 (1163)
|.||.|||++ ..+..+.++.+ +..+.+.|.+ +++..+ .+++|..-+..+..|++..|+-| .+|.+.+
T Consensus 166 d~al~rrF~~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ryi~~~~~PdKAIdll-Dea~a~~ 241 (268)
T d1r6bx2 166 DRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVI-DEAGARA 241 (268)
T ss_dssp TTSSGGGEEEEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHCTTSCTTHHHHHHH-HHHHHHH
T ss_pred cHHHHhhhcccccCCCCHHHHHHHHHHhhHHHhccCCEEeChHHHHHHHHHHHhhccCCCCCcHHHHHH-HHHHHHH
Confidence 9999999985 33444555666 5566677877 777777 88999999999999999999944 5554443
No 46
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=98.80 E-value=1.1e-10 Score=132.38 Aligned_cols=171 Identities=17% Similarity=0.276 Sum_probs=122.8
Q ss_pred HHHHHHHHHHhhccCCCeEE--------------------------------EEcchhhhhcC---ChhhHHHHHHHHhc
Q 001076 689 AINELFEVALNESKSSPLIV--------------------------------FVKDIEKSLTG---NNDAYGALKSKLEN 733 (1163)
Q Consensus 689 ~l~~l~evl~~e~k~~P~II--------------------------------ffddid~~La~---~~~~~~~i~s~L~~ 733 (1163)
-+++++++|+++.|+||++| |--|+..++|| +++|..++++.+..
T Consensus 30 ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~~g~~e~r~~~i~~~ 109 (387)
T d1qvra2 30 EIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQE 109 (387)
T ss_dssp HHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC-----------CHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHhhhhcccCcchhHHHHHHHHHHH
Confidence 39999999999999999999 88999999996 68999999998877
Q ss_pred C---CCCEEEEEeccccccccccCCCCCceeeccCCchhhhccccCCCCccccccccccchHHHHHhhhccccceeecCC
Q 001076 734 L---PSNVVVIGSHTQLDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLP 810 (1163)
Q Consensus 734 L---~g~VivIgs~~~~d~~~~~~~~~~~~~~~~~~~~~~lldp~~pd~~~~~~~r~~~~~~~~~~l~~lf~~~i~i~~P 810 (1163)
+ .|+||++.+..|...+.+.+ +|+| |+.|+|+|. +.+|+.+| |+.+++.+|+. +.
T Consensus 110 ~~~~~~~~ilfide~h~l~~~g~~-~g~~-------d~a~~Lkp~----L~rg~~~~---------I~~tT~~ey~~-~e 167 (387)
T d1qvra2 110 VVQSQGEVILFIDELHTVVGAGKA-EGAV-------DAGNMLKPA----LARGELRL---------IGATTLDEYRE-IE 167 (387)
T ss_dssp HHTTCSSEEEEECCC---------------------------HHH----HHTTCCCE---------EEEECHHHHHH-HT
T ss_pred hccCCCceEEEeccHHHHhcCCCC-CCcc-------cHHHHHHHH----HhCCCcce---------eeecCHHHHHH-hc
Confidence 6 67999999999999888864 5567 899999996 99999999 99999999986 58
Q ss_pred chhHHHHHHHH------HHHHhhhhhhc-cchhhHHHhh-hhcCCC-CcccccchhhcccCCchhhhhhHHhHHhhhhhh
Q 001076 811 QDEALLSDWKQ------QLERDVETLKG-QSNIISIRSV-LSRNGL-DCVDLESLCIKDQTLTTEGVEKIVGWALSHHFM 881 (1163)
Q Consensus 811 ~DeALlRRfer------q~e~~Lpdlkg-R~~Il~IHT~-l~~~~L-~~vdLeeLa~~tkg~sgadIe~Lv~~Aas~Al~ 881 (1163)
+|.||.|||++ ..+..+.++.+ +..+...|.+ +.+..+ .++.|...++.++.|++..|+-|...++...+.
T Consensus 168 ~d~al~rrF~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdKAidlld~a~a~~~i~ 247 (387)
T d1qvra2 168 KDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMA 247 (387)
T ss_dssp TCTTTCSCCCCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHhcccccCCCCcHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHhcccccccccChhhHHHHHHHHHHHHHhh
Confidence 89999999986 44555666776 6677778887 777777 899999999999999999999666655555543
No 47
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=98.70 E-value=9.3e-09 Score=109.48 Aligned_cols=163 Identities=20% Similarity=0.266 Sum_probs=95.0
Q ss_pred cccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEeccccccc---
Q 001076 950 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK--- 1023 (1163)
Q Consensus 950 dI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~seL~s~--- 1023 (1163)
+++|.+..++.+.+.+...- ....+|||+|++||||+++|++|.... ..+++.++|..+...
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a------------~~~~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~~~ 68 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKIS------------CAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFE 68 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHT------------TCCSCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHH
T ss_pred CeEecCHHHHHHHHHHHHHh------------CCCCCEEEECCCCcCHHHHHHHHHHhcCCcccccccchhhhhhhcccH
Confidence 35677778887777665311 122469999999999999999998776 568899998765322
Q ss_pred --cccchH-------HHHHHHHHHHhccCCeEEEEccccccccCCCCcchHHHHHHHHHHHH-HHhcCCcccCCCCEEEE
Q 001076 1024 --WFGEGE-------KYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFM-VNWDGLRTKDKERVLVL 1093 (1163)
Q Consensus 1024 --~~Ge~E-------~~Ir~lF~~A~k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL-~~Ldgl~~k~~~~VlVI 1093 (1163)
.+|... ..-..+|+.| ..++|||||||.| +...+..+..++.+-- ..+.+. .....++.+|
T Consensus 69 ~~lfg~~~~~~~~~~~~~~g~l~~a---~gGtL~l~~i~~L-----~~~~Q~~L~~~l~~~~~~~~~~~-~~~~~~~RlI 139 (247)
T d1ny5a2 69 AELFGYEKGAFTGAVSSKEGFFELA---DGGTLFLDEIGEL-----SLEAQAKLLRVIESGKFYRLGGR-KEIEVNVRIL 139 (247)
T ss_dssp HHHHCBCTTSSTTCCSCBCCHHHHT---TTSEEEEESGGGC-----CHHHHHHHHHHHHHSEECCBTCC-SBEECCCEEE
T ss_pred HHhcCcccCCcCCcccccCCHHHcc---CCCEEEEeChHhC-----CHHHHHHHHHHHHhCCEEECCCC-CceecCeEEE
Confidence 111110 0011234443 3479999999988 2222222221111100 001111 1112367889
Q ss_pred EEeCCC-------CCCCHHHHhccCcEEEecCCCHHHH----HHHHHHHHhh
Q 001076 1094 AATNRP-------FDLDEAVVRRLPRRLMVNLPDAPNR----EKIIRVILAK 1134 (1163)
Q Consensus 1094 aTTN~p-------~~Ld~aLlrRFd~vI~I~~Pd~eeR----~eILk~ll~k 1134 (1163)
++|+.+ ..+++.|+.|+. .+.+.+|+..+| ..|++.++.+
T Consensus 140 ~~s~~~l~~l~~~~~f~~~L~~~l~-~~~i~lPpLreR~~Di~~l~~~~l~~ 190 (247)
T d1ny5a2 140 AATNRNIKELVKEGKFREDLYYRLG-VIEIEIPPLRERKEDIIPLANHFLKK 190 (247)
T ss_dssp EEESSCHHHHHHTTSSCHHHHHHHT-TEEEECCCGGGCHHHHHHHHHHHHHH
T ss_pred EecCCCHHHHHHcCCCcHHHHhhcC-eeeecCCChhhchhhHhhhhhhhhhh
Confidence 988763 357778888874 456777776655 3444555543
No 48
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=98.68 E-value=5.3e-10 Score=123.55 Aligned_cols=132 Identities=10% Similarity=0.027 Sum_probs=91.7
Q ss_pred eeecCCCCCCCCCC-----CCCCCCCCcccccccccccCCCcchhhHHHHHHHHHHHHhhccCCCeEEEEcchhhhhcC-
Q 001076 646 VRFDRSIPEGNNLG-----GFCEDDHGFFCTASSLRLDSSLGDEVDKLAINELFEVALNESKSSPLIVFVKDIEKSLTG- 719 (1163)
Q Consensus 646 V~Fd~~~~~~~~l~-----~~c~~~~~ff~~~~~~~~d~s~~~~~~~~~l~~l~evl~~e~k~~P~IIffddid~~La~- 719 (1163)
+.|-+|+++|||+- ++|.....||-=.+..- +++|+|+.+..++.+|+.+. +|.||||||||.+...
T Consensus 126 ~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~--~~~~~G~~e~~~~~~f~~a~-----~~~ilf~DEid~~~~~r 198 (321)
T d1w44a_ 126 VIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEP--LSGYNTDFNVFVDDIARAML-----QHRVIVIDSLKNVIGAA 198 (321)
T ss_dssp EEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCS--STTCBCCHHHHHHHHHHHHH-----HCSEEEEECCTTTC---
T ss_pred EEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHh--hhcccchHHHHHHHHHHHHh-----hccEEEeehhhhhcccc
Confidence 56789999999987 43332223553333333 58999999999999998773 3789999999995541
Q ss_pred --------ChhhHHHHHHHHhcC--CCCEEEEEeccccccccccCCCCCceeeccCCchhhhccccCCCCcccccccccc
Q 001076 720 --------NNDAYGALKSKLENL--PSNVVVIGSHTQLDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKE 789 (1163)
Q Consensus 720 --------~~~~~~~i~s~L~~L--~g~VivIgs~~~~d~~~~~~~~~~~~~~~~~~~~~~lldp~~pd~~~~~~~r~~~ 789 (1163)
.++..+-+...++.+ ..+|+|||+||+.+. |+ ++
T Consensus 199 ~~~~~~~~~~r~v~~lL~e~dg~~~~~~v~viaatN~~~~-----------------------~~----~i--------- 242 (321)
T d1w44a_ 199 GGNTTSGGISRGAFDLLSDIGAMAASRGCVVIASLNPTSN-----------------------DD----KI--------- 242 (321)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHTCEEEEECCCCCC-----------------------CH----HH---------
T ss_pred ccCCCCCcchhhhhhhhhhccccccCCCeEEEEeCCCccc-----------------------cc----ch---------
Confidence 123333333334323 348999999994221 11 12
Q ss_pred chHHHHHhhhccccceeecCCchhHHHH--HHHHHHHHhhhhhhccchhhHHHhh
Q 001076 790 TPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVETLKGQSNIISIRSV 842 (1163)
Q Consensus 790 ~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferq~e~~LpdlkgR~~Il~IHT~ 842 (1163)
|++++| ||+++++.+.||..+|.+|++.|+.
T Consensus 243 ----------------------~~~~~r~~Rf~~~v~v~~pd~~~r~~il~~~~~ 275 (321)
T d1w44a_ 243 ----------------------VELVKEASRSNSTSLVISTDVDGEWQVLTRTGE 275 (321)
T ss_dssp ----------------------HHHHHHHHHHSCSEEEEECSSTTEEEEEEECBT
T ss_pred ----------------------hhhhhccCcccceeecCCCChHHHHHHHHHhcc
Confidence 237777 9999999999999999999999864
No 49
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.67 E-value=6.4e-08 Score=99.62 Aligned_cols=116 Identities=16% Similarity=0.228 Sum_probs=84.5
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhC------CcEEEEeccccccccccchHHHHHHHHHHHhcc----CCeEEEEcccc
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEAG------ANFINISMSSITSKWFGEGEKYVKAVFSLASKI----APSVVFVDEVD 1053 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eLg------~pfi~Id~seL~s~~~Ge~E~~Ir~lF~~A~k~----~PsILfIDEID 1053 (1163)
+.++||+||+|+|||++|..+++... ..|+.+.... ..+ .-..++.+...+... ..-|++|||+|
T Consensus 15 ~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~---~~I--~Id~IR~i~~~~~~~~~~~~~KviIId~ad 89 (198)
T d2gnoa2 15 GISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEG---ENI--GIDDIRTIKDFLNYSPELYTRKYVIVHDCE 89 (198)
T ss_dssp SEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSS---SCB--CHHHHHHHHHHHTSCCSSSSSEEEEETTGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCc---CCC--CHHHHHHHHHHHhhCcccCCCEEEEEeCcc
Confidence 46899999999999999999998772 2467766421 111 234567776666544 34599999999
Q ss_pred ccccCCCCcchHHHHHHHHHHHHHHhcCCcccCCCCEEEEEEeCCCCCCCHHHHhccCcEEEecCCCH
Q 001076 1054 SMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDA 1121 (1163)
Q Consensus 1054 ~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~~Pd~ 1121 (1163)
.|- ....+.|+..|+. .+.++++|.+|+.+..+.+++++|+ .++.++.|..
T Consensus 90 ~l~------------~~aqNaLLK~LEE----Pp~~t~fiLit~~~~~ll~TI~SRC-~~i~~~~p~~ 140 (198)
T d2gnoa2 90 RMT------------QQAANAFLKALEE----PPEYAVIVLNTRRWHYLLPTIKSRV-FRVVVNVPKE 140 (198)
T ss_dssp GBC------------HHHHHHTHHHHHS----CCTTEEEEEEESCGGGSCHHHHTTS-EEEECCCCHH
T ss_pred ccc------------hhhhhHHHHHHhC----CCCCceeeeccCChhhCHHHHhcce-EEEeCCCchH
Confidence 983 2334555655554 3467899999999999999999999 6788887753
No 50
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.62 E-value=1.1e-09 Score=115.09 Aligned_cols=68 Identities=31% Similarity=0.418 Sum_probs=50.9
Q ss_pred CCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEeccccccc
Q 001076 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSK 1023 (1163)
Q Consensus 946 ~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~s~ 1023 (1163)
++|++..+.+...+.+.++... ..-...|++|||+||||||||+||++||.+++.+|+.++++++...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~~~~ 71 (273)
T d1gvnb_ 4 VNFTDKQFENRLNDNLEELIQG----------KKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQ 71 (273)
T ss_dssp TCCCHHHHHHHHHHHHHHHHTT----------CCCCSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHTT
T ss_pred cccChHHHHHHHHHHHHHHHhc----------ccCCCCCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEecHHHHHH
Confidence 4556666666666666555432 1113456899999999999999999999999999999998876543
No 51
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.60 E-value=1.2e-06 Score=90.71 Aligned_cols=182 Identities=14% Similarity=0.097 Sum_probs=111.7
Q ss_pred CcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecccccccccc
Q 001076 947 TFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFG 1026 (1163)
Q Consensus 947 tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~s~~~G 1026 (1163)
.-++++|.++..+.|.+. ..+.++|+||+|+|||+|++.+++.++..+..+++.........
T Consensus 10 ~~~~f~GR~~el~~l~~~------------------~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~~~~~~~ 71 (283)
T d2fnaa2 10 NRKDFFDREKEIEKLKGL------------------RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYI 71 (283)
T ss_dssp SGGGSCCCHHHHHHHHHT------------------CSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTTCSCC
T ss_pred ChhhCCChHHHHHHHHhc------------------cCCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEEeccccccccc
Confidence 457899999888877541 12579999999999999999999999999888886543211100
Q ss_pred ch----------------------------------------------HHHHHHHHHHH--hccCCeEEEEccccccccC
Q 001076 1027 EG----------------------------------------------EKYVKAVFSLA--SKIAPSVVFVDEVDSMLGR 1058 (1163)
Q Consensus 1027 e~----------------------------------------------E~~Ir~lF~~A--~k~~PsILfIDEID~L~g~ 1058 (1163)
.. ...+..++... ....+.+|++||++.|...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~~ 151 (283)
T d2fnaa2 72 SYKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKL 151 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGC
T ss_pred cHHHHHHHHHHHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHHhhcccccccccchhhhhccc
Confidence 00 01122222222 2245788999999988643
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCcccCCCCEEEEEEeCCC---------CCCCHHHHhccCcEEEecCCCHHHHHHHHH
Q 001076 1059 RENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRP---------FDLDEAVVRRLPRRLMVNLPDAPNREKIIR 1129 (1163)
Q Consensus 1059 r~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p---------~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk 1129 (1163)
... ... ..+..+... ..++..|.+.... ......+..|+...+.++..+.++..+++.
T Consensus 152 ~~~-~~~----~~l~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~ 218 (283)
T d2fnaa2 152 RGV-NLL----PALAYAYDN--------LKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLR 218 (283)
T ss_dssp TTC-CCH----HHHHHHHHH--------CTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHH
T ss_pred chH-HHH----HHHHHHHHh--------hhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHHH
Confidence 322 111 112222211 1344555544321 111222334555779999999999999999
Q ss_pred HHHhhCCCCChhhHHHHHHHcCCCCHHHHHhh
Q 001076 1130 VILAKEELASDVDLEGIANMADGYSGSDLKVD 1161 (1163)
Q Consensus 1130 ~ll~k~~l~~dvdl~~LA~~TeGySgaDLk~L 1161 (1163)
..+...++..+ +++.+.+.+.|. +..|..+
T Consensus 219 ~~~~~~~~~~~-~~~~i~~~~~G~-P~~L~~~ 248 (283)
T d2fnaa2 219 RGFQEADIDFK-DYEVVYEKIGGI-PGWLTYF 248 (283)
T ss_dssp HHHHHHTCCCC-CHHHHHHHHCSC-HHHHHHH
T ss_pred hhhhhcCCCHH-HHHHHHHHhCCC-HHHHHHH
Confidence 98877665433 467888999887 4445443
No 52
>d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.55 E-value=8.6e-08 Score=89.58 Aligned_cols=79 Identities=22% Similarity=0.361 Sum_probs=63.9
Q ss_pred eeecceeEEccC--CccceeecCCCCCccceEEEEeecCCcceEEEEEecC-CceEEEcCeecCCCceEEeeCCCEEEEc
Q 001076 148 SMTGAVFTVGHN--RQCDLYLKDPSISKNLCRLRRIENGGPSGALLEITGG-KGEVEVNGNVHPKDSQVVLRGGDELVFS 224 (1163)
Q Consensus 148 ~i~~~~~t~G~~--~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~~~-~G~v~vNg~~~~k~~~~~L~~gDev~f~ 224 (1163)
.|.....+||++ ..||+.|.++.+|..||.|.... +. .+|++.++ ||| +|||++|.+ .+.|++||+|.|+
T Consensus 25 ~l~~~~~~iG~~rs~~~dI~L~~~~Vs~~Ha~i~~~~--~~--~~l~d~~s~~gt-~vng~~v~~--~~~L~~gd~i~iG 97 (107)
T d1wlna1 25 RLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMD--GV--VTVTPRSMDAET-YVDGQRISE--TTMLQSGMRLQFG 97 (107)
T ss_dssp ECCSEEEECSSSCCSTTCCCCCCTTCCSSCEEEEESS--SC--EEEEESCSSSCE-EETSCBCSS--CEEECTTCEEEET
T ss_pred EECCCCEEECCCCCCCCcEEECCcceeeeEEEEEEcc--cc--cEEecCCCCcce-EEccccccc--eeECCCCCEEEEC
Confidence 455789999965 57999999999999999999753 33 67788755 576 899999975 6789999999998
Q ss_pred cCCCeeEEeee
Q 001076 225 PSGKHSYIFQQ 235 (1163)
Q Consensus 225 ~~~~~ayifq~ 235 (1163)
. .|-|.|.+
T Consensus 98 ~--~~~Frf~~ 106 (107)
T d1wlna1 98 T--SHVFKFVD 106 (107)
T ss_dssp T--TEEEEEEC
T ss_pred C--ceEEEEeC
Confidence 4 36777764
No 53
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=98.50 E-value=2.5e-08 Score=109.18 Aligned_cols=66 Identities=18% Similarity=0.267 Sum_probs=52.2
Q ss_pred chhHHHHHHHhhhhhhcccccccccC-CCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccCC
Q 001076 461 SDITKNVLIASTYVHLKCNNFAKYAS-DLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1163)
Q Consensus 461 se~Tk~~L~~~~~~hLk~~~~~k~~~-~l~~~s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~~ 530 (1163)
-++.|.+|..|.|-|+++..+..-.+ +.++ +-|||.||+| --.-.||||||+.++.++..+|.+.+
T Consensus 19 Qd~A~~~l~~av~~~~~r~~~~~~~~~~~~~--~~iLl~GPpG--~GKT~lAkalA~~~~~~~~~i~~s~~ 85 (309)
T d1ofha_ 19 QADAKRAVAIALRNRWRRMQLQEPLRHEVTP--KNILMIGPTG--VGKTEIARRLAKLANAPFIKVEATKF 85 (309)
T ss_dssp CHHHHHHHHHHHHHHHHTTSSCHHHHHHCCC--CCEEEECCTT--SSHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred hHHHHHHHHHHHHHHHHHhccCCCCccCCCC--ceEEEECCCC--CCHHHHHHHHhhccccchhccccccc
Confidence 37899999999999998876543222 2222 6799999999 57889999999999999999997554
No 54
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=98.40 E-value=9.8e-09 Score=109.19 Aligned_cols=102 Identities=25% Similarity=0.271 Sum_probs=62.3
Q ss_pred ceeeeecCCCCCCCCCC--CCCCCCCC-cccccccccccCCCcchhhH-HHHHHHHHHHHhhccCCCeEEEEcchhhhhc
Q 001076 643 KIGVRFDRSIPEGNNLG--GFCEDDHG-FFCTASSLRLDSSLGDEVDK-LAINELFEVALNESKSSPLIVFVKDIEKSLT 718 (1163)
Q Consensus 643 kvgV~Fd~~~~~~~~l~--~~c~~~~~-ff~~~~~~~~d~s~~~~~~~-~~l~~l~evl~~e~k~~P~IIffddid~~La 718 (1163)
..||+|.+|+++|||+. ..|..-.. ||.-....- +.++.+..+ ..++.+|+.+.. ++|+||||||||.++.
T Consensus 40 ~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~--~~g~~~~~~~~~i~~if~~A~~---~~p~il~iDEid~l~~ 114 (246)
T d1d2na_ 40 LVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDK--MIGFSETAKCQAMKKIFDDAYK---SQLSCVVVDDIERLLD 114 (246)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGG--CTTCCHHHHHHHHHHHHHHHHT---SSEEEEEECCHHHHTT
T ss_pred CeEEEEECcCCCCHHHHHHHHhhcccccccccccccc--cccccccchhhhhhhhhhhhhh---cccceeehhhhhhHhh
Confidence 35899999999999987 22322222 331111111 345555543 457777777765 8999999999999655
Q ss_pred C-------ChhhHHHHHHHHhcCC--C-CEEEEEecccccc
Q 001076 719 G-------NNDAYGALKSKLENLP--S-NVVVIGSHTQLDS 749 (1163)
Q Consensus 719 ~-------~~~~~~~i~s~L~~L~--g-~VivIgs~~~~d~ 749 (1163)
. ...+.+.+...|+.+. + +|+|||+||+++.
T Consensus 115 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~~v~vi~tTn~~~~ 155 (246)
T d1d2na_ 115 YVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDV 155 (246)
T ss_dssp CBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEEEEEESCHHH
T ss_pred hcccccchhHHHHHHHHHHhcCCCccccceeeeeccCChhh
Confidence 2 2233333433443332 2 6999999996544
No 55
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=97.98 E-value=6.6e-07 Score=91.88 Aligned_cols=112 Identities=18% Similarity=0.280 Sum_probs=95.7
Q ss_pred HHHHHHHHHHhhccCCCeEE--------------------------------EEcchhhhhcC---ChhhHHHHHHHHhc
Q 001076 689 AINELFEVALNESKSSPLIV--------------------------------FVKDIEKSLTG---NNDAYGALKSKLEN 733 (1163)
Q Consensus 689 ~l~~l~evl~~e~k~~P~II--------------------------------ffddid~~La~---~~~~~~~i~s~L~~ 733 (1163)
-++++.++|++..|++|++| |--|+..++|| +++|..+++..|..
T Consensus 30 Ei~~l~~iL~r~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~~LiAg~~~rG~~E~rl~~il~e 109 (195)
T d1jbka_ 30 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLND 109 (195)
T ss_dssp HHHHHHHHHTSSSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHHHHTTTCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeHHHHhccCCccHHHHHHHHHHHHH
Confidence 48999999999889999998 88899999996 57999999999977
Q ss_pred C---CCCEEEEEeccccccccccCCCCCceeeccCCchhhhccccCCCCccccccccccchHHHHHhhhccccceeecCC
Q 001076 734 L---PSNVVVIGSHTQLDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLP 810 (1163)
Q Consensus 734 L---~g~VivIgs~~~~d~~~~~~~~~~~~~~~~~~~~~~lldp~~pd~~~~~~~r~~~~~~~~~~l~~lf~~~i~i~~P 810 (1163)
+ .|+||++.+..|.-.+++.+ .|++ ++.|+|+|. +.+++.+| |+.+++.+|+..+.
T Consensus 110 ~~~~~~~iILfIDeih~l~~~g~~-~g~~-------d~~~~Lkp~----L~rg~l~~---------IgatT~eey~~~~e 168 (195)
T d1jbka_ 110 LAKQEGNVILFIDELHTMVGAGKA-DGAM-------DAGNMLKPA----LARGELHC---------VGATTLDEYRQYIE 168 (195)
T ss_dssp HHHSTTTEEEEEETGGGGTT-------CC-------CCHHHHHHH----HHTTSCCE---------EEEECHHHHHHHTT
T ss_pred HhcCCCcEEEEcchHHHHhcCCCC-CCcc-------cHHHHHHHH----HhCCCceE---------EecCCHHHHHHHHH
Confidence 6 67999999999999877765 3566 889999996 89999999 99999999999999
Q ss_pred chhHHHHHHHH
Q 001076 811 QDEALLSDWKQ 821 (1163)
Q Consensus 811 ~DeALlRRfer 821 (1163)
+|.||.|||++
T Consensus 169 ~d~aL~rrF~~ 179 (195)
T d1jbka_ 169 KDAALERRFQK 179 (195)
T ss_dssp TCHHHHTTEEE
T ss_pred cCHHHHhcCCE
Confidence 99999999974
No 56
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=97.93 E-value=3e-05 Score=75.63 Aligned_cols=26 Identities=38% Similarity=0.692 Sum_probs=23.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCc
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGAN 1011 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~p 1011 (1163)
.|+|.||+|+|||+|++.|+..++.+
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~ 27 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKR 27 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGG
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCC
Confidence 58999999999999999999988654
No 57
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.57 E-value=0.00076 Score=71.62 Aligned_cols=179 Identities=16% Similarity=0.109 Sum_probs=97.6
Q ss_pred HHHhcCCCCCCCCCCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh---
Q 001076 932 KKLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA--- 1008 (1163)
Q Consensus 932 k~ll~~iip~~e~~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eL--- 1008 (1163)
+.++...+|+.. ++.|.+..++.+.+.+..- . .....-|.|+|..|+|||+||+.+++..
T Consensus 9 ~~l~~~~~p~~~------~~~gR~~~~~~i~~~L~~~---------~--~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~ 71 (277)
T d2a5yb3 9 RKLLLGNVPKQM------TCYIREYHVDRVIKKLDEM---------C--DLDSFFLFLHGRAGSGKSVIASQALSKSDQL 71 (277)
T ss_dssp HHHHHTTCBCCC------CSCCCHHHHHHHHHHHHHH---------T--TSSSEEEEEECSTTSSHHHHHHHHHHHCSST
T ss_pred ccccccCCCCCC------ceeCcHHHHHHHHHHHHhc---------c--CCCceEEEEECCCCCCHHHHHHHHHHhhhhh
Confidence 344444555332 5678999998888877421 0 1123458899999999999999998874
Q ss_pred -CCcE---EEEeccccccc------------------------cccchHHHHHH-HHHHHhccCCeEEEEccccccccCC
Q 001076 1009 -GANF---INISMSSITSK------------------------WFGEGEKYVKA-VFSLASKIAPSVVFVDEVDSMLGRR 1059 (1163)
Q Consensus 1009 -g~pf---i~Id~seL~s~------------------------~~Ge~E~~Ir~-lF~~A~k~~PsILfIDEID~L~g~r 1059 (1163)
+..| +.++.+..... .........+. .....-...+++|+||+++..
T Consensus 72 ~~~~f~~~~Wv~vs~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~---- 147 (277)
T d2a5yb3 72 IGINYDSIVWLKDSGTAPKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQE---- 147 (277)
T ss_dssp BTTTBSEEEEEECCCCSTTHHHHHHHHHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCH----
T ss_pred hhhcCceEEEEEecCCCCHHHHHHHHHHHHHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhHH----
Confidence 2222 23332221000 00111112222 223333556799999999632
Q ss_pred CCcchHHHHHHHHHHHHHHhcCCcccCCCCEEEEEEeCCCCCCCHHHHhccCcEEEecCCCHHHHHHHHHHHHhhCCCCC
Q 001076 1060 ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELAS 1139 (1163)
Q Consensus 1060 ~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~~Pd~eeR~eILk~ll~k~~l~~ 1139 (1163)
...+ .+. . ....||.||....... .+..+. ..+.+...+.++-.++|..+.......+
T Consensus 148 ------~~~~----~~~----~------~~srilvTTR~~~v~~-~~~~~~-~~~~l~~L~~~ea~~Lf~~~~~~~~~~~ 205 (277)
T d2a5yb3 148 ------ETIR----WAQ----E------LRLRCLVTTRDVEISN-AASQTC-EFIEVTSLEIDECYDFLEAYGMPMPVGE 205 (277)
T ss_dssp ------HHHH----HHH----H------TTCEEEEEESBGGGGG-GCCSCE-EEEECCCCCHHHHHHHHHHTSCCCC--C
T ss_pred ------hhhh----hhc----c------cCceEEEEeehHHHHH-hcCCCC-ceEECCCCCHHHHHHHHHHHhCCccCch
Confidence 1111 111 0 1235777776542211 111111 3577888999999999876543332222
Q ss_pred h--hhHHHHHHHcCCC
Q 001076 1140 D--VDLEGIANMADGY 1153 (1163)
Q Consensus 1140 d--vdl~~LA~~TeGy 1153 (1163)
. .....|++.|.|.
T Consensus 206 ~~~~~~~~iv~~c~Gl 221 (277)
T d2a5yb3 206 KEEDVLNKTIELSSGN 221 (277)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHhCCC
Confidence 1 1246788888776
No 58
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.57 E-value=2.6e-05 Score=73.69 Aligned_cols=32 Identities=28% Similarity=0.638 Sum_probs=28.9
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id 1016 (1163)
+.|+|.||||+|||++|+.||+.++++|+..+
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id~~ 34 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSD 34 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEEHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCeEeec
Confidence 46999999999999999999999999997543
No 59
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.53 E-value=1.7e-05 Score=76.71 Aligned_cols=37 Identities=16% Similarity=0.190 Sum_probs=32.7
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecccc
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 1020 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL 1020 (1163)
++.|+|+||||||||+||++||+.++.+++..+...+
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~~~~ 43 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREF 43 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEECCTTHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCCeEeeehHHH
Confidence 3689999999999999999999999999987766543
No 60
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.31 E-value=4.6e-05 Score=73.27 Aligned_cols=32 Identities=47% Similarity=0.838 Sum_probs=28.8
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id 1016 (1163)
..|+|.||||+|||++|+.||+.+|++++.++
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~~l~~~~i~~~ 36 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELASKSGLKYINVG 36 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHCCEEEEHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCcEEech
Confidence 46999999999999999999999999997643
No 61
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.14 E-value=8.8e-05 Score=72.48 Aligned_cols=32 Identities=34% Similarity=0.587 Sum_probs=29.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id 1016 (1163)
++|+|.|+||+|||++++.||+.+|++|+..|
T Consensus 1 k~I~liG~~GsGKsTi~k~La~~l~~~~~d~d 32 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAKDLDLVFLDSD 32 (161)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTCEEEEHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHhCCCEEecC
Confidence 36899999999999999999999999999754
No 62
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.13 E-value=8.3e-05 Score=71.78 Aligned_cols=36 Identities=31% Similarity=0.530 Sum_probs=32.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecccc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 1020 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL 1020 (1163)
+-|+|.||||+|||++|++|++++|.+++.++...+
T Consensus 5 ~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d~~ 40 (176)
T d1zp6a1 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDL 40 (176)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCEEEecHHHH
Confidence 458999999999999999999999999999986543
No 63
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.07 E-value=0.00012 Score=71.83 Aligned_cols=32 Identities=25% Similarity=0.553 Sum_probs=29.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id 1016 (1163)
+.|+|.|+||+|||++|+.+|+.+|++|+..|
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~D 34 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDTD 34 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEEehh
Confidence 46889999999999999999999999998654
No 64
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.03 E-value=0.00013 Score=71.05 Aligned_cols=31 Identities=26% Similarity=0.615 Sum_probs=28.3
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi~Id 1016 (1163)
.|+|.|+||+|||++++.||+.++.+|+..|
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l~~~fiD~D 33 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTD 33 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTCCEEEHH
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCeEeec
Confidence 5788899999999999999999999998655
No 65
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=96.96 E-value=0.00029 Score=67.54 Aligned_cols=33 Identities=15% Similarity=0.343 Sum_probs=30.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEec
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~ 1017 (1163)
+-|+|+|+||+|||++|++|++.++.+++.++.
T Consensus 4 kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~ 36 (178)
T d1qhxa_ 4 RMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGV 36 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCCeEEeec
Confidence 458999999999999999999999999988774
No 66
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.86 E-value=0.00036 Score=66.94 Aligned_cols=24 Identities=38% Similarity=0.690 Sum_probs=22.7
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
++|+|+||||||||+|+++++..+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 579999999999999999999887
No 67
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.83 E-value=0.00033 Score=67.34 Aligned_cols=32 Identities=31% Similarity=0.477 Sum_probs=28.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id 1016 (1163)
+=++|.||||+|||++|+.|++.++++++..+
T Consensus 7 ~iivl~G~~GsGKsT~a~~La~~l~~~~~~~d 38 (171)
T d1knqa_ 7 HIYVLMGVSGSGKSAVASEVAHQLHAAFLDGD 38 (171)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHTCEEEEGG
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCeechh
Confidence 45889999999999999999999999887655
No 68
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.82 E-value=0.00032 Score=66.82 Aligned_cols=28 Identities=25% Similarity=0.417 Sum_probs=25.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEE
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi 1013 (1163)
-|+|+||||+|||++|++||+.++..++
T Consensus 4 lI~i~G~~GsGKTTva~~L~~~~~~~~~ 31 (176)
T d2bdta1 4 LYIITGPAGVGKSTTCKRLAAQLDNSAY 31 (176)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSSEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHcCCCEE
Confidence 4899999999999999999999987654
No 69
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.70 E-value=0.0045 Score=62.82 Aligned_cols=73 Identities=21% Similarity=0.236 Sum_probs=50.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecccccc--------------c--------------cccchHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITS--------------K--------------WFGEGEKYVK 1033 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~seL~s--------------~--------------~~Ge~E~~Ir 1033 (1163)
.-++|+|+||+|||+||..+|... +..++.++..+-.. . ........+.
T Consensus 27 sl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (242)
T d1tf7a2 27 SIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQ 106 (242)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESSSCHHHHHHHHHTTSCCHHHHHHTTSEEECCCCGGGSCHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeeccCCHHHHHHHHHHcCCChHHHhhcCceEEEEeecchhhHHHHHH
Confidence 458999999999999999998876 55666665432000 0 0111233455
Q ss_pred HHHHHHhccCCeEEEEcccccccc
Q 001076 1034 AVFSLASKIAPSVVFVDEVDSMLG 1057 (1163)
Q Consensus 1034 ~lF~~A~k~~PsILfIDEID~L~g 1057 (1163)
.+........+.+++||.++.++.
T Consensus 107 ~i~~~i~~~~~~~vviDs~~~~~~ 130 (242)
T d1tf7a2 107 IIKSEINDFKPARIAIDSLSALAR 130 (242)
T ss_dssp HHHHHHHTTCCSEEEEECHHHHTS
T ss_pred HHHHHHHhcCCceeeeecchhhhc
Confidence 566666778899999999998864
No 70
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.62 E-value=0.00065 Score=66.20 Aligned_cols=30 Identities=30% Similarity=0.557 Sum_probs=27.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi~I 1015 (1163)
.|+|.||||+|||++|+.||+.+|++++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i~~ 31 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHIST 31 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceech
Confidence 589999999999999999999999987764
No 71
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=96.61 E-value=0.00072 Score=64.93 Aligned_cols=26 Identities=46% Similarity=0.718 Sum_probs=23.9
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCC
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGA 1010 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~ 1010 (1163)
..|+|+||||+|||++|+.||+.++.
T Consensus 6 ~~I~i~G~~GsGKTT~~~~La~~l~~ 31 (174)
T d1y63a_ 6 INILITGTPGTGKTSMAEMIAAELDG 31 (174)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHhCC
Confidence 56999999999999999999999864
No 72
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=96.60 E-value=0.003 Score=70.53 Aligned_cols=96 Identities=20% Similarity=0.270 Sum_probs=65.7
Q ss_pred CCCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhC---CcEEEEec-cc
Q 001076 944 IGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG---ANFINISM-SS 1019 (1163)
Q Consensus 944 ~~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg---~pfi~Id~-se 1019 (1163)
...++++++-.+...+.+++++.. +..-|||.||+|+|||++..++..++. .+++.+-- .+
T Consensus 133 ~~~~l~~LG~~~~~~~~l~~l~~~---------------~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE 197 (401)
T d1p9ra_ 133 TRLDLHSLGMTAHNHDNFRRLIKR---------------PHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIE 197 (401)
T ss_dssp TCCCGGGSCCCHHHHHHHHHHHTS---------------SSEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCC
T ss_pred cchhhhhhcccHHHHHHHHHHHhh---------------hhceEEEEcCCCCCccHHHHHHhhhhcCCCceEEEeccCcc
Confidence 345788888888888888877632 323489999999999999999988873 45555532 22
Q ss_pred cccc------cccchHHHHHHHHHHHhccCCeEEEEccccc
Q 001076 1020 ITSK------WFGEGEKYVKAVFSLASKIAPSVVFVDEVDS 1054 (1163)
Q Consensus 1020 L~s~------~~Ge~E~~Ir~lF~~A~k~~PsILfIDEID~ 1054 (1163)
..-. ..+............+.++.|.||+|.||-.
T Consensus 198 ~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiRd 238 (401)
T d1p9ra_ 198 FDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRD 238 (401)
T ss_dssp SCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCCS
T ss_pred cccCCCCeeeecCCcCCCHHHHHHHHHhhcCCEEEecCcCC
Confidence 1110 0111222345666777899999999999963
No 73
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=96.55 E-value=0.00054 Score=67.91 Aligned_cols=32 Identities=19% Similarity=0.301 Sum_probs=28.4
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eLg~pfi~I 1015 (1163)
|..|+|.||||+|||++|+.||+.+|++++.+
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~~~~~is~ 34 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKYQLAHISA 34 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHCCEECCH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHCCcEEeh
Confidence 35799999999999999999999999987643
No 74
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.52 E-value=0.012 Score=60.18 Aligned_cols=134 Identities=15% Similarity=0.153 Sum_probs=72.2
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecccccc--------------------ccccchHHHHHHHHHHHh
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITS--------------------KWFGEGEKYVKAVFSLAS 1040 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~seL~s--------------------~~~Ge~E~~Ir~lF~~A~ 1040 (1163)
+.-++|.||+|+|||+.+..||..+ |..+.-+.+..+.. ....+....+......++
T Consensus 9 p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~~~~a~ 88 (211)
T d2qy9a2 9 PFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAK 88 (211)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccccchhhhhhhhhhcCCcccccccCCCHHHHHHHHHHHHH
Confidence 4568999999999999877788666 55555555433110 011223345555566666
Q ss_pred ccCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCccc-CCCCEEEEEEeCCCCCCCHHHHh----ccCcEEE
Q 001076 1041 KIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK-DKERVLVLAATNRPFDLDEAVVR----RLPRRLM 1115 (1163)
Q Consensus 1041 k~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k-~~~~VlVIaTTN~p~~Ld~aLlr----RFd~vI~ 1115 (1163)
...-.+||||=..+.- .....+. -+..+...+...... +...++|+-++...+.+...... -+ ..+.
T Consensus 89 ~~~~d~ilIDTaGr~~------~d~~~~~-el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~-~~lI 160 (211)
T d2qy9a2 89 ARNIDVLIADTAGRLQ------NKSHLME-ELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGL-TGIT 160 (211)
T ss_dssp HTTCSEEEECCCCCGG------GHHHHHH-HHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHHHHHHHHHSCC-CEEE
T ss_pred HcCCCEEEeccCCCcc------ccHHHHH-HHHHHHHHHhhhcccCcceeeeehhcccCcchHHHHhhhhhccCC-ceEE
Confidence 6667899999886541 2222222 223333333332221 22456666666555555443222 13 2455
Q ss_pred ecCCCHHHHH
Q 001076 1116 VNLPDAPNRE 1125 (1163)
Q Consensus 1116 I~~Pd~eeR~ 1125 (1163)
+...|...|.
T Consensus 161 lTKlDe~~~~ 170 (211)
T d2qy9a2 161 LTKLDGTAKG 170 (211)
T ss_dssp EECCTTCTTT
T ss_pred EeecCCCCCc
Confidence 6666655553
No 75
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.48 E-value=0.0009 Score=66.29 Aligned_cols=30 Identities=20% Similarity=0.459 Sum_probs=27.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~ 1014 (1163)
.-|+|.||||+|||++|+.||+.+|+.++.
T Consensus 7 ~iI~i~G~pGSGKsT~a~~La~~~g~~~i~ 36 (194)
T d1qf9a_ 7 NVVFVLGGPGSGKGTQCANIVRDFGWVHLS 36 (194)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHCCEEEE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHCCceEc
Confidence 568999999999999999999999987654
No 76
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=96.47 E-value=0.00099 Score=65.86 Aligned_cols=31 Identities=29% Similarity=0.455 Sum_probs=27.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~I 1015 (1163)
..|+|.||||+|||++|+.||+.+|++++.+
T Consensus 4 ~riil~G~pGSGKsT~a~~La~~~g~~~i~~ 34 (190)
T d1ak2a1 4 VRAVLLGPPGAGKGTQAPKLAKNFCVCHLAT 34 (190)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHTCEEEEH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeEEeH
Confidence 4688899999999999999999998887654
No 77
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.47 E-value=0.00042 Score=66.35 Aligned_cols=26 Identities=27% Similarity=0.338 Sum_probs=23.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCC
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGA 1010 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~ 1010 (1163)
.-|+|+|+||+|||++|++||+.++.
T Consensus 7 ~~I~l~G~~GsGKTTia~~La~~L~~ 32 (183)
T d1m8pa3 7 FTIFLTGYMNSGKDAIARALQVTLNQ 32 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 34899999999999999999999843
No 78
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.38 E-value=0.0055 Score=62.62 Aligned_cols=71 Identities=15% Similarity=0.172 Sum_probs=42.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEeccccc--------------cc--c----ccchHHHHHHHHHHHhc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSIT--------------SK--W----FGEGEKYVKAVFSLASK 1041 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~seL~--------------s~--~----~Ge~E~~Ir~lF~~A~k 1041 (1163)
+-++|.||+|+|||+.+..||..+ |..+.-+.+.... +- + .......+......++.
T Consensus 7 ~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~~~~~~~ 86 (207)
T d1okkd2 7 RVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKA 86 (207)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeccccccchhhHhhcccccCceEEeccCCccHHHHHHHHHHHHHH
Confidence 568999999999999777777666 5555444433211 00 0 01122333333334444
Q ss_pred cCCeEEEEcccccc
Q 001076 1042 IAPSVVFVDEVDSM 1055 (1163)
Q Consensus 1042 ~~PsILfIDEID~L 1055 (1163)
..-.+||||=..+.
T Consensus 87 ~~~d~ilIDTaGr~ 100 (207)
T d1okkd2 87 RGYDLLFVDTAGRL 100 (207)
T ss_dssp HTCSEEEECCCCCC
T ss_pred CCCCEEEcCccccc
Confidence 45689999988754
No 79
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.36 E-value=0.0012 Score=64.85 Aligned_cols=30 Identities=40% Similarity=0.651 Sum_probs=27.4
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi~I 1015 (1163)
.|+|.||||+|||++|+.||+.+|+.++.+
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i~~ 31 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQIST 31 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceEch
Confidence 589999999999999999999999887754
No 80
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=96.35 E-value=0.0041 Score=65.79 Aligned_cols=73 Identities=26% Similarity=0.322 Sum_probs=50.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecccccc------------c----cccchHHHHHHHHHHHhccCCe
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITS------------K----WFGEGEKYVKAVFSLASKIAPS 1045 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~seL~s------------~----~~Ge~E~~Ir~lF~~A~k~~Ps 1045 (1163)
.-++|+||||+|||+|+-.++... |..++++|...-+. + .....|+.+.-+-...+..++.
T Consensus 55 ~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~~~~~~a~~~Gvd~d~v~~~~~~~~E~~~~~i~~l~~~~~~~ 134 (263)
T d1u94a1 55 RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVD 134 (263)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHHHTCCS
T ss_pred eEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEccccccCHHHHHHhCCCHHHEEEecCCCHHHHHHHHHHHHhcCCCC
Confidence 447999999999999998886555 77788888654111 1 1123454444444445567789
Q ss_pred EEEEcccccccc
Q 001076 1046 VVFVDEVDSMLG 1057 (1163)
Q Consensus 1046 ILfIDEID~L~g 1057 (1163)
+|+||-|..++.
T Consensus 135 liViDSi~al~~ 146 (263)
T d1u94a1 135 VIVVDSVAALTP 146 (263)
T ss_dssp EEEEECGGGCCC
T ss_pred EEEEECcccccc
Confidence 999999988863
No 81
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.35 E-value=0.0014 Score=65.46 Aligned_cols=31 Identities=16% Similarity=0.377 Sum_probs=27.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~I 1015 (1163)
..|+|.||||+|||++|+.||+.+|+.++.+
T Consensus 7 mrIiliG~PGSGKtT~a~~La~~~g~~~is~ 37 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSRITKHFELKHLSS 37 (189)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHBCCEEEEH
T ss_pred eeEEEECCCCCCHHHHHHHHHHHHCCeEEcH
Confidence 5789999999999999999999999777543
No 82
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.29 E-value=0.0013 Score=64.91 Aligned_cols=30 Identities=20% Similarity=0.444 Sum_probs=26.9
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~ 1014 (1163)
.-|+|.||||+||||+|+.||+.+|+.++.
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~g~~~i~ 31 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKYGYTHLS 31 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHCCEEEE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCceEc
Confidence 468999999999999999999999877653
No 83
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.28 E-value=0.0012 Score=65.55 Aligned_cols=31 Identities=19% Similarity=0.382 Sum_probs=27.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~I 1015 (1163)
+-|+|.||||+|||++|+.||+.+|+.++..
T Consensus 9 ~iI~i~GppGSGKsT~a~~La~~~g~~~is~ 39 (196)
T d1ukza_ 9 SVIFVLGGPGAGKGTQCEKLVKDYSFVHLSA 39 (196)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSCEEEEH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeEEeh
Confidence 4589999999999999999999998877653
No 84
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=96.26 E-value=0.0014 Score=64.36 Aligned_cols=30 Identities=33% Similarity=0.582 Sum_probs=27.4
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi~I 1015 (1163)
.|+|.||||+|||++|+.||+.+|++++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~is~ 31 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHIST 31 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceeeH
Confidence 589999999999999999999999988764
No 85
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.25 E-value=0.00044 Score=67.72 Aligned_cols=28 Identities=25% Similarity=0.226 Sum_probs=24.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcE
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANF 1012 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pf 1012 (1163)
.-|+|+|+||+|||++|+.||..++.++
T Consensus 20 ~vI~L~G~pGSGKTTiAk~La~~l~~~~ 47 (195)
T d1x6va3 20 CTVWLTGLSGAGKTTVSMALEEYLVCHG 47 (195)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhcC
Confidence 4578999999999999999999995443
No 86
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.24 E-value=0.0015 Score=64.22 Aligned_cols=31 Identities=29% Similarity=0.488 Sum_probs=27.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~I 1015 (1163)
..|+|.||||+|||++|+.||+.+|++++..
T Consensus 3 mrIvl~G~pGSGKtT~a~~La~~~g~~~i~~ 33 (180)
T d1akya1 3 IRMVLIGPPGAGKGTQAPNLQERFHAAHLAT 33 (180)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHCCEEEEH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCceEec
Confidence 4688999999999999999999999887655
No 87
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.23 E-value=0.0013 Score=65.53 Aligned_cols=29 Identities=34% Similarity=0.507 Sum_probs=26.3
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi~ 1014 (1163)
-|.|.||||+||+++|+.||+.+|++++.
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~gl~~iS 33 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQWHLLD 33 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEEC
Confidence 57888999999999999999999988853
No 88
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.19 E-value=0.0015 Score=64.84 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=29.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEeccccc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT 1021 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~ 1021 (1163)
+-|+|.||||+|||++|+.||+.+|++++ ++.+++
T Consensus 9 ~iI~l~G~pGSGKsT~a~~La~~~g~~~i--s~g~ll 43 (194)
T d3adka_ 9 KIIFVVGGPGSGKGTQCEKIVQKYGYTHL--STGDLL 43 (194)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHTCCEEE--EHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeeE--eccHHH
Confidence 56899999999999999999999988775 444443
No 89
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.13 E-value=0.0037 Score=61.61 Aligned_cols=33 Identities=24% Similarity=0.401 Sum_probs=26.8
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecc
Q 001076 986 GILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~s 1018 (1163)
=|+|+|.||+|||++|++||+.+ +.+...++..
T Consensus 4 li~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~~D 39 (213)
T d1bifa1 4 LIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVG 39 (213)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcCCCCeEEccc
Confidence 38999999999999999999887 4555555543
No 90
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.11 E-value=0.0018 Score=63.35 Aligned_cols=30 Identities=30% Similarity=0.441 Sum_probs=27.1
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi~I 1015 (1163)
.|+|.||||+|||++|+.||+.+++.++..
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i~~ 31 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQIST 31 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceech
Confidence 588999999999999999999999887653
No 91
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=96.09 E-value=0.008 Score=61.17 Aligned_cols=123 Identities=17% Similarity=0.159 Sum_probs=68.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEeccccccccccchHHHHHHHHHHHhccCCeEEEEccccccccCCCCcch
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGE 1064 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~s~~~Ge~E~~Ir~lF~~A~k~~PsILfIDEID~L~g~r~s~~~ 1064 (1163)
+.++|+|||+||||++|.+|++-++..++.+.-+. +. |....-..-.|+++||+....
T Consensus 54 n~i~~~GP~~TGKS~f~~sl~~~l~G~vis~~N~~--s~------------F~Lq~l~~~kv~l~dD~t~~~-------- 111 (205)
T d1tuea_ 54 NCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNST--SH------------FWLEPLTDTKVAMLDDATTTC-------- 111 (205)
T ss_dssp SEEEEESCGGGCHHHHHHHHHHHHTCEECCCCCSS--SC------------GGGGGGTTCSSEEEEEECHHH--------
T ss_pred eEEEEECCCCccHHHHHHHHHHHhCCEEEeccCCC--CC------------cccccccCCeEEEEeccccch--------
Confidence 56999999999999999999999976554432111 00 111111223588999985321
Q ss_pred HHHHHHHHHH-HHHHhcCCcc----cCCC-----CEEEEEEeCCC---CCCCHHHHhccCcEEEecC-------------
Q 001076 1065 HEAMRKMKNE-FMVNWDGLRT----KDKE-----RVLVLAATNRP---FDLDEAVVRRLPRRLMVNL------------- 1118 (1163)
Q Consensus 1065 ~eal~~il~~-LL~~Ldgl~~----k~~~-----~VlVIaTTN~p---~~Ld~aLlrRFd~vI~I~~------------- 1118 (1163)
...+.+ +...++|-.- +.+. ..-+|.|||.. +.-...|.+|. .++.|+.
T Consensus 112 ----~~~~d~~lK~ll~G~~vsvd~KhK~~vqi~~pPliITsN~~~~~~d~~~~L~sRi-~~f~F~~~fP~~~~~~p~~~ 186 (205)
T d1tuea_ 112 ----WTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPYLESRI-TVFEFPNAFPFDKNGNPVYE 186 (205)
T ss_dssp ----HHHHHHHCHHHHHTCCEEEC----CCEEECCCCEEEEESSCTTSSSSCHHHHTSC-EEEECCSCCCBCTTSCBSCC
T ss_pred ----HHHHHHHHHhccCCCeeeeecccCCcccccCCCEEEEcCCCCCccccchhhhheE-EEEECCCcCCCCCCCCccee
Confidence 122233 2334454211 1111 12345677753 33347888886 5666642
Q ss_pred CCHHHHHHHHHHHHhh
Q 001076 1119 PDAPNREKIIRVILAK 1134 (1163)
Q Consensus 1119 Pd~eeR~eILk~ll~k 1134 (1163)
.+.++-..+|+.+..+
T Consensus 187 l~~~~wk~Ff~~~w~~ 202 (205)
T d1tuea_ 187 INDKNWKCFFERTWSR 202 (205)
T ss_dssp CCHHHHHHHHHHHTGG
T ss_pred cChhHHHHHHHHHHHh
Confidence 2455666677666544
No 92
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=96.08 E-value=0.016 Score=53.79 Aligned_cols=32 Identities=22% Similarity=0.357 Sum_probs=25.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id 1016 (1163)
...||.+|+|+|||+++..++...+..++.+-
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~ 40 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLN 40 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHcCCcEEEEc
Confidence 56899999999999988777766776665544
No 93
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.04 E-value=0.021 Score=58.37 Aligned_cols=26 Identities=35% Similarity=0.363 Sum_probs=21.3
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
+|.-++|.||+|+|||+.+..||..+
T Consensus 10 ~p~vi~lvGptGvGKTTTiAKLAa~~ 35 (213)
T d1vmaa2 10 PPFVIMVVGVNGTGKTTSCGKLAKMF 35 (213)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 44568999999999999777777665
No 94
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=95.92 E-value=0.0023 Score=64.22 Aligned_cols=28 Identities=32% Similarity=0.663 Sum_probs=25.2
Q ss_pred EEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001076 987 ILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eLg~pfi~ 1014 (1163)
|.|.||||+|||++|+.||+++|++++.
T Consensus 6 IaIdGp~GsGKgT~ak~La~~lg~~~is 33 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDFGFTYLD 33 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcEEC
Confidence 5677999999999999999999998754
No 95
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.87 E-value=0.0034 Score=61.84 Aligned_cols=33 Identities=24% Similarity=0.366 Sum_probs=27.2
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id 1016 (1163)
+.-|||+|+||+|||++|+.++...++.++..|
T Consensus 14 p~liil~G~pGsGKST~a~~l~~~~~~~~i~~D 46 (172)
T d1yj5a2 14 PEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRD 46 (172)
T ss_dssp CCEEEEECCTTSSHHHHHHHHTGGGTCEEEEHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhcCCEEEchH
Confidence 355899999999999999999988886665433
No 96
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=95.85 E-value=0.025 Score=55.89 Aligned_cols=76 Identities=16% Similarity=0.178 Sum_probs=48.5
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh----CCcEEEEeccccc-------cc---------------------------c
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEA----GANFINISMSSIT-------SK---------------------------W 1024 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eL----g~pfi~Id~seL~-------s~---------------------------~ 1024 (1163)
+..-++|+|+||+|||+||..+|... +..+..++...-. .. .
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEV 104 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHHHGGGTCCHHHHHHTTSEEEEECCCCSSCCSC
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHcCCChHHHHHhcchhhhhhccchhhhhh
Confidence 33568999999999999998765432 5566666543200 00 0
Q ss_pred c--cchHHHHHHHHHHHhccCCeEEEEccccccccC
Q 001076 1025 F--GEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGR 1058 (1163)
Q Consensus 1025 ~--Ge~E~~Ir~lF~~A~k~~PsILfIDEID~L~g~ 1058 (1163)
. ......+..+...+.++.+.+++||.+..+...
T Consensus 105 ~~~~~~~~l~~~l~~~i~~~~~~~viiD~~~~l~~~ 140 (242)
T d1tf7a1 105 VGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQ 140 (242)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTCSEEEEECSTTTSTT
T ss_pred hccccHHHHHHHHHHHHHhhccchhhhhHHHHHHHh
Confidence 0 011223455556667788999999999988643
No 97
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=95.82 E-value=0.018 Score=60.87 Aligned_cols=75 Identities=28% Similarity=0.319 Sum_probs=51.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEeccccccc----------------cccchHHHHHHHHHHHhccCCe
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK----------------WFGEGEKYVKAVFSLASKIAPS 1045 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~seL~s~----------------~~Ge~E~~Ir~lF~~A~k~~Ps 1045 (1163)
+-+.|+||+|+|||+||..++..+ |..++++|...-+.. .....|+.+.-+-.......+.
T Consensus 58 ~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~~~~~~~a~~~Gvd~d~i~~~~~~~~E~~~~~~~~l~~~~~~~ 137 (268)
T d1xp8a1 58 RITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQPDNGEQALEIMELLVRSGAID 137 (268)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHTTTCCS
T ss_pred eEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCccCCHHHHHHhCCCchhEEEEcCCCHHHHHHHHHHHHhcCCCc
Confidence 347999999999999998886555 778888986542110 1123344444333344455688
Q ss_pred EEEEccccccccCC
Q 001076 1046 VVFVDEVDSMLGRR 1059 (1163)
Q Consensus 1046 ILfIDEID~L~g~r 1059 (1163)
+|+||-+..|+.+.
T Consensus 138 liIiDSi~al~~r~ 151 (268)
T d1xp8a1 138 VVVVDSVAALTPRA 151 (268)
T ss_dssp EEEEECTTTCCCST
T ss_pred EEEEecccccccHH
Confidence 99999999998543
No 98
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=95.71 E-value=0.0025 Score=59.93 Aligned_cols=33 Identities=33% Similarity=0.520 Sum_probs=24.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEEeccc
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFINISMSS 1019 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi~Id~se 1019 (1163)
-|+|+|+||+|||++|+.|+.... .+..++..+
T Consensus 4 lIii~G~pGsGKTTla~~L~~~~~-~~~~~~~d~ 36 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTWAREFIAKNP-GFYNINRDD 36 (152)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHST-TEEEECHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHhCC-CCEEechHH
Confidence 478999999999999999876653 344555444
No 99
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=95.61 E-value=0.027 Score=58.27 Aligned_cols=36 Identities=17% Similarity=0.181 Sum_probs=28.0
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh----CCcEEEEecc
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEA----GANFINISMS 1018 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eL----g~pfi~Id~s 1018 (1163)
+..-++|.|+||+|||+++..+|..+ |.++..+++.
T Consensus 34 ~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~E 73 (277)
T d1cr2a_ 34 GGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLE 73 (277)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEESS
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEeeec
Confidence 33458999999999999988887542 7788777653
No 100
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=95.56 E-value=0.0048 Score=67.06 Aligned_cols=69 Identities=20% Similarity=0.341 Sum_probs=48.9
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhC--CcEEEE-ecccccc-------ccccchHHHHHHHHHHHhccCCeEEEEcccc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAG--ANFINI-SMSSITS-------KWFGEGEKYVKAVFSLASKIAPSVVFVDEVD 1053 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg--~pfi~I-d~seL~s-------~~~Ge~E~~Ir~lF~~A~k~~PsILfIDEID 1053 (1163)
++||++|++|+|||++.++++.... ..++.+ +..++.- .+.+..+-....++..+.+..|..|++.|+-
T Consensus 167 ~nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~~~~~~ll~~~lR~~pd~iivgEiR 245 (323)
T d1g6oa_ 167 KNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELR 245 (323)
T ss_dssp CCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTTBCHHHHHHHHTTSCCSEEEESCCC
T ss_pred CCEEEEeeccccchHHHHHHhhhcccccceeeccchhhhhcccccccceeccccchhHHHHHHHHhccCCCcccCCccC
Confidence 4799999999999999999998873 344444 2233211 1112223345677888899999999999994
No 101
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=95.53 E-value=0.014 Score=59.75 Aligned_cols=72 Identities=18% Similarity=0.037 Sum_probs=38.4
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecccc--------------cc------ccccchHHHHHHHHHHH
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSI--------------TS------KWFGEGEKYVKAVFSLA 1039 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~seL--------------~s------~~~Ge~E~~Ir~lF~~A 1039 (1163)
.|.-|+|.||+|+|||+.+..||..+ +..+.-+.+... ++ ....+....+.+....+
T Consensus 11 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~a~~~~ 90 (211)
T d1j8yf2 11 IPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGVEKF 90 (211)
T ss_dssp SSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTCCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeeccccchhHHHHHhccccCcceeecccchhhhHHHHHHHHHh
Confidence 34568999999999999877777665 444444433221 10 01112233344444445
Q ss_pred hccCCeEEEEccccc
Q 001076 1040 SKIAPSVVFVDEVDS 1054 (1163)
Q Consensus 1040 ~k~~PsILfIDEID~ 1054 (1163)
+...-.+||||=..+
T Consensus 91 ~~~~~d~IlIDTaGr 105 (211)
T d1j8yf2 91 LSEKMEIIIVDTAGR 105 (211)
T ss_dssp HHTTCSEEEEECCCS
T ss_pred hccCCceEEEecCCc
Confidence 555668999997753
No 102
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=95.47 E-value=0.057 Score=54.77 Aligned_cols=71 Identities=21% Similarity=0.156 Sum_probs=42.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEeccccc--------------c------ccccchHHHHHHHHHHHhc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSIT--------------S------KWFGEGEKYVKAVFSLASK 1041 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~seL~--------------s------~~~Ge~E~~Ir~lF~~A~k 1041 (1163)
+-++|.||+|+|||+.+..||..+ +..+..+++.... . ................++.
T Consensus 11 ~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 90 (207)
T d1ls1a2 11 NLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARL 90 (207)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSCHHHHHHHHHHHHHHTCCEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccchHHHHHHHHHHhcCCccccccccchhhHHHHHHHHHHhh
Confidence 347889999999999888787666 5665555543311 0 0011222223333334455
Q ss_pred cCCeEEEEcccccc
Q 001076 1042 IAPSVVFVDEVDSM 1055 (1163)
Q Consensus 1042 ~~PsILfIDEID~L 1055 (1163)
..-.+|+||=..+.
T Consensus 91 ~~~d~vlIDTaGr~ 104 (207)
T d1ls1a2 91 EARDLILVDTAGRL 104 (207)
T ss_dssp HTCCEEEEECCCCS
T ss_pred ccCcceeecccccc
Confidence 55679999988654
No 103
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=95.45 E-value=0.013 Score=53.52 Aligned_cols=20 Identities=30% Similarity=0.137 Sum_probs=16.4
Q ss_pred CCceEEEEcCCCChHHHHHH
Q 001076 983 PCKGILLFGPPGTGKTMLAK 1002 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LAr 1002 (1163)
....++|++|+|+|||..+-
T Consensus 6 ~~~~~il~~~tGsGKT~~~~ 25 (140)
T d1yksa1 6 KGMTTVLDFHPGAGKTRRFL 25 (140)
T ss_dssp TTCEEEECCCTTSSTTTTHH
T ss_pred cCCcEEEEcCCCCChhHHHH
Confidence 34689999999999997553
No 104
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=95.26 E-value=0.0069 Score=57.36 Aligned_cols=31 Identities=29% Similarity=0.195 Sum_probs=25.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh---CCcEEEEe
Q 001076 986 GILLFGPPGTGKTMLAKAVATEA---GANFINIS 1016 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eL---g~pfi~Id 1016 (1163)
-+.|+|++|+|||+|++.|++++ |..+..+.
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~ 37 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIK 37 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEec
Confidence 58999999999999999999887 55554443
No 105
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.14 E-value=0.0057 Score=58.48 Aligned_cols=32 Identities=25% Similarity=0.412 Sum_probs=25.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhC---CcEEEEe
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAG---ANFINIS 1016 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg---~pfi~Id 1016 (1163)
+-|+|.|+||+|||++++.|++.++ ..+..+.
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~ 36 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVS 36 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTTTCCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHcCCCeEEEe
Confidence 3589999999999999999999883 3444443
No 106
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=95.11 E-value=0.034 Score=60.95 Aligned_cols=20 Identities=35% Similarity=0.459 Sum_probs=16.8
Q ss_pred eEEEEcCCCChHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVA 1005 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA 1005 (1163)
-++|+||||||||+++..+.
T Consensus 165 ~~vI~G~pGTGKTt~i~~~l 184 (359)
T d1w36d1 165 ISVISGGPGTGKTTTVAKLL 184 (359)
T ss_dssp EEEEECCTTSTHHHHHHHHH
T ss_pred eEEEEcCCCCCceehHHHHH
Confidence 58999999999999876544
No 107
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=94.99 E-value=0.014 Score=59.33 Aligned_cols=64 Identities=20% Similarity=0.250 Sum_probs=52.1
Q ss_pred cccccccccchhHHHHHHHhhhhhhcccccccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccC
Q 001076 452 SFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1163)
Q Consensus 452 sf~~FPYylse~Tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1163)
|||+ |+-.|++|..|-.+...|.+.+.. -+-+||+||+| .-.-+|||+||+++++....++.+.
T Consensus 7 ~~dd--ivGq~~~~~~L~~~i~~~~~~~~~----------~~~~Ll~GPpG--~GKTtla~~la~~~~~~~~~~~~~~ 70 (239)
T d1ixsb2 7 TLDE--YIGQERLKQKLRVYLEAAKARKEP----------LEHLLLFGPPG--LGKTTLAHVIAHELGVNLRVTSGPA 70 (239)
T ss_dssp SGGG--SCSCHHHHHHHHHHHHHHTTSSSC----------CCCEEEECCTT--SCHHHHHHHHHHHHTCCEEEEETTT
T ss_pred CHHH--hCCHHHHHHHHHHHHHHHHhcCCC----------CCeEEEECCCC--CCHHHHHHHHHHHhCCCeEeccCCc
Confidence 7888 578899999998887766554332 24599999999 6788999999999999999888654
No 108
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.99 E-value=0.028 Score=59.48 Aligned_cols=73 Identities=23% Similarity=0.287 Sum_probs=48.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecccccc------------c----cccchHHHHHHHHHHHhccCCe
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITS------------K----WFGEGEKYVKAVFSLASKIAPS 1045 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~seL~s------------~----~~Ge~E~~Ir~lF~~A~k~~Ps 1045 (1163)
+-+.|+||+|+|||+||..++... |..+++||...-++ + .....|+.+.-+-.......+.
T Consensus 61 ~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~~e~a~~~GvD~d~il~~~~~~~E~~~~~~~~l~~~~~~~ 140 (269)
T d1mo6a1 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLIRSGALD 140 (269)
T ss_dssp SEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCCHHHHHHHTCCGGGCEEECCSSHHHHHHHHHHHHHTTCEE
T ss_pred eeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCccCCHHHHHHhCCCHHHeEEecCCCHHHHHHHHHHHHhcCCCC
Confidence 447999999999999987775444 77888888654211 1 1122344333232333455678
Q ss_pred EEEEcccccccc
Q 001076 1046 VVFVDEVDSMLG 1057 (1163)
Q Consensus 1046 ILfIDEID~L~g 1057 (1163)
+|+||-+..+++
T Consensus 141 liIiDSi~al~~ 152 (269)
T d1mo6a1 141 IVVIDSVAALVP 152 (269)
T ss_dssp EEEEECSTTCCC
T ss_pred EEEEeccccccc
Confidence 999999998874
No 109
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=94.73 E-value=0.0092 Score=57.27 Aligned_cols=31 Identities=29% Similarity=0.298 Sum_probs=25.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh---CCcEEEEe
Q 001076 986 GILLFGPPGTGKTMLAKAVATEA---GANFINIS 1016 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eL---g~pfi~Id 1016 (1163)
=++|.|+||+|||++++.|++.+ ++.+..+.
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L~~~~~~~~~~~ 36 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIIN 36 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 36899999999999999999998 44555554
No 110
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=94.70 E-value=0.011 Score=60.00 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=31.9
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh----CCcEEEEeccccc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA----GANFINISMSSIT 1021 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL----g~pfi~Id~seL~ 1021 (1163)
.-|+|+|.||+|||+||++|++.+ +.+++.+|...+.
T Consensus 25 ~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~iR 65 (208)
T d1m7ga_ 25 LTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIR 65 (208)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchHHH
Confidence 569999999999999999999766 7889999976643
No 111
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.38 E-value=0.048 Score=54.09 Aligned_cols=73 Identities=21% Similarity=0.235 Sum_probs=46.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---------CCcEEEEeccccccc---------c------------------ccch
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA---------GANFINISMSSITSK---------W------------------FGEG 1028 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL---------g~pfi~Id~seL~s~---------~------------------~Ge~ 1028 (1163)
.-++|+||||+|||+|+..+|... +.+++.++...-... + ....
T Consensus 35 ~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (251)
T d1szpa2 35 SITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQ 114 (251)
T ss_dssp SEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGGGHHHHHHTCCCHHHHGGGEEEEECCSTTTH
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecchHHHHHHHHHHHhcCCchhhhhcceEEEeccchhHH
Confidence 568999999999999999887543 445666665431100 0 0111
Q ss_pred HHHHHHHHHHHhccCCeEEEEcccccccc
Q 001076 1029 EKYVKAVFSLASKIAPSVVFVDEVDSMLG 1057 (1163)
Q Consensus 1029 E~~Ir~lF~~A~k~~PsILfIDEID~L~g 1057 (1163)
...............+.++++|.+..+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~ds~~~~~~ 143 (251)
T d1szpa2 115 LRLLDAAAQMMSESRFSLIVVDSVMALYR 143 (251)
T ss_dssp HHHHHHTHHHHHHSCEEEEEEETGGGGGS
T ss_pred HHHHHHHHHHhhccccceeeehhhhhhhh
Confidence 22233344455556778999999987763
No 112
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.16 E-value=0.04 Score=53.04 Aligned_cols=31 Identities=26% Similarity=0.333 Sum_probs=24.8
Q ss_pred EEEEcCCCChHHHHHHHHHHHh---CCcEEEEec
Q 001076 987 ILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eL---g~pfi~Id~ 1017 (1163)
|-|.||+|+|||+||+.|+..+ +.....++.
T Consensus 25 IgI~G~~GSGKSTla~~L~~~l~~~~~~~~~~~~ 58 (198)
T d1rz3a_ 25 LGIDGLSRSGKTTLANQLSQTLREQGISVCVFHM 58 (198)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred EEEECCCCCCHHHHHHHHHHHhccccccceeccc
Confidence 5699999999999999999877 445555543
No 113
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=93.77 E-value=5.4e-05 Score=84.22 Aligned_cols=63 Identities=3% Similarity=-0.089 Sum_probs=39.8
Q ss_pred HHHHHHHHhhhhhhccc-hhhHHHhhhhcCCCCcccccchhhcccCCchhhhhhHHhHHhhhhhhhc
Q 001076 818 DWKQQLERDVETLKGQS-NIISIRSVLSRNGLDCVDLESLCIKDQTLTTEGVEKIVGWALSHHFMHC 883 (1163)
Q Consensus 818 Rferq~e~~LpdlkgR~-~Il~IHT~l~~~~L~~vdLeeLa~~tkg~sgadIe~Lv~~Aas~Al~r~ 883 (1163)
||++++++..|+...|. +++..|. ....+ ..+.+.|+..+.+++++|++.++.+++..+..+.
T Consensus 275 Rf~~~i~~~~~~~~~~~~~~l~~i~--~~~~l-~~~~~~L~~li~~~s~~D~~~~i~~~~~~~~~~l 338 (362)
T d1svma_ 275 RFVKQIDFRPKDYLKHCLERSEFLL--EKRII-QSGIALLLMLIWYRPVAEFAQSIQSRIVEWKERL 338 (362)
T ss_dssp TEEEEEECCCCHHHHHHHHTCTHHH--HTTCT-TCHHHHHHHHHHHSCGGGSCGGGHHHHHHHHHHH
T ss_pred cCceEEeecCCCcHHHHHHHHHHHh--cccCC-CCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH
Confidence 66666666666655442 3333332 22222 2345668888889999999999999988776543
No 114
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=93.45 E-value=0.061 Score=56.55 Aligned_cols=55 Identities=27% Similarity=0.383 Sum_probs=37.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEeccccccccccchHHHHHHHHHHHhccCCeEEEEccccc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDS 1054 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~seL~s~~~Ge~E~~Ir~lF~~A~k~~PsILfIDEID~ 1054 (1163)
..++|+||++||||+++.+|++.+|.- ..++-+. + -|..+.-....|+++||.+.
T Consensus 105 n~~~l~G~~~tGKS~f~~~i~~~lg~~-~~~~~~~--~------------~f~l~~l~~k~~~~~~e~~~ 159 (267)
T d1u0ja_ 105 NTIWLFGPATTGKTNIAEAIAHTVPFY-GCVNWTN--E------------NFPFNDCVDKMVIWWEEGKM 159 (267)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHSSCE-EECCTTC--S------------SCTTGGGSSCSEEEECSCCE
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHhcch-hhccccC--C------------CccccccCCCEEEEEeCCCc
Confidence 569999999999999999999999653 2222111 0 12233333446889999863
No 115
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.42 E-value=0.026 Score=55.87 Aligned_cols=28 Identities=36% Similarity=0.549 Sum_probs=24.3
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEE
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi 1013 (1163)
.|+|.||+|+|||+|++.|++..+--|.
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~~~~ 29 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSSIFG 29 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTTTEE
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCCcee
Confidence 4899999999999999999999865443
No 116
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.38 E-value=0.025 Score=55.75 Aligned_cols=28 Identities=39% Similarity=0.648 Sum_probs=24.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcE
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANF 1012 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pf 1012 (1163)
+.|+|.||+|+|||+|++.|+++....|
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~~~ 29 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPDSF 29 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred CeEEEECCCCCCHHHHHHHHHHhCCcce
Confidence 4599999999999999999999875433
No 117
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=93.16 E-value=0.046 Score=55.10 Aligned_cols=65 Identities=20% Similarity=0.311 Sum_probs=50.0
Q ss_pred cccccccccchhHHHHHHHhhhhhhcccccccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccCC
Q 001076 452 SFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1163)
Q Consensus 452 sf~~FPYylse~Tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~~ 530 (1163)
+||+ +.-.|+.+.-|...--.+.++.+. -|-+||+||+| .-.-+|||+||++++....++..+..
T Consensus 7 ~~~d--ivGqe~~~~~l~~~i~~~~~~~~~----------~~~~L~~GPpG--tGKT~lA~~la~~~~~~~~~~~~~~~ 71 (238)
T d1in4a2 7 SLDE--FIGQENVKKKLSLALEAAKMRGEV----------LDHVLLAGPPG--LGKTTLAHIIASELQTNIHVTSGPVL 71 (238)
T ss_dssp SGGG--CCSCHHHHHHHHHHHHHHHHHTCC----------CCCEEEESSTT--SSHHHHHHHHHHHHTCCEEEEETTTC
T ss_pred cHHH--cCChHHHHHHHHHHHHHHHhcCCC----------CCeEEEECCCC--CcHHHHHHHHHhccCCCcccccCccc
Confidence 6888 678899999888775544433322 23599999999 56999999999999999988875443
No 118
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.14 E-value=0.24 Score=48.51 Aligned_cols=23 Identities=30% Similarity=0.465 Sum_probs=20.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
+.|+|.|+||+|||+|..++...
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 47999999999999999999764
No 119
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=93.13 E-value=0.28 Score=50.27 Aligned_cols=67 Identities=22% Similarity=0.310 Sum_probs=39.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh-----CCcE------------EE--Eeccc-ccc--ccccchHHHHHHHHHHHhcc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA-----GANF------------IN--ISMSS-ITS--KWFGEGEKYVKAVFSLASKI 1042 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL-----g~pf------------i~--Id~se-L~s--~~~Ge~E~~Ir~lF~~A~k~ 1042 (1163)
+.++|+||...|||++.|+++-.. |+++ +. +...+ +.. ..+..--..+..++..+.
T Consensus 42 ~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a~~~~~d~I~~~~~~~d~~~~~~S~F~~E~~~~~~il~~~~-- 119 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNAT-- 119 (234)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCCEEEEEEC-----------CHHHHHHHHHHHHHCC--
T ss_pred eEEEEeccCchhhHHHHHHHHHHHHHHHcCCeEecCceecccchhheeEEccCcccccchhHHHHHHHHHHHHHHhcc--
Confidence 568999999999999999986443 4321 11 22221 110 112222234556666554
Q ss_pred CCeEEEEcccc
Q 001076 1043 APSVVFVDEVD 1053 (1163)
Q Consensus 1043 ~PsILfIDEID 1053 (1163)
..++++|||+-
T Consensus 120 ~~sLvliDE~~ 130 (234)
T d1wb9a2 120 EYSLVLMDEIG 130 (234)
T ss_dssp TTEEEEEESCC
T ss_pred cccEEeecccc
Confidence 35899999996
No 120
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=92.75 E-value=0.13 Score=48.10 Aligned_cols=21 Identities=33% Similarity=0.597 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
.|+|.|+||+|||+|..++..
T Consensus 3 kI~lvG~~nvGKSsLin~l~~ 23 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAG 23 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999999863
No 121
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=92.75 E-value=0.31 Score=49.67 Aligned_cols=25 Identities=36% Similarity=0.430 Sum_probs=21.1
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHh
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
..-.+|+|+||+|||+|+..+|..+
T Consensus 29 g~~~~i~G~~G~GKS~l~l~la~~i 53 (274)
T d1nlfa_ 29 GTVGALVSPGGAGKSMLALQLAAQI 53 (274)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 3457999999999999999888664
No 122
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=92.58 E-value=0.21 Score=47.20 Aligned_cols=22 Identities=27% Similarity=0.415 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|++|+|||+|...+...
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~ 25 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 5899999999999999998654
No 123
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=92.44 E-value=0.27 Score=45.15 Aligned_cols=23 Identities=26% Similarity=0.359 Sum_probs=20.4
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh
Q 001076 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.|+|.|+||+|||+|...+...-
T Consensus 2 kivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 58999999999999999987554
No 124
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=92.33 E-value=0.56 Score=44.70 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
-|.|.|.+|+|||+|..++...
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4999999999999999999754
No 125
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.75 E-value=0.051 Score=52.03 Aligned_cols=26 Identities=27% Similarity=0.313 Sum_probs=22.4
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
+..-++|+||||+|||+||..+|...
T Consensus 22 ~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 22 TGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 44568999999999999999998765
No 126
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=91.51 E-value=0.073 Score=50.81 Aligned_cols=30 Identities=23% Similarity=0.228 Sum_probs=24.8
Q ss_pred EEEEcCCCChHHHHHHHHHHHh---CCcEEEEe
Q 001076 987 ILLFGPPGTGKTMLAKAVATEA---GANFINIS 1016 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eL---g~pfi~Id 1016 (1163)
+-++|++|+|||+|+..|+.++ |..+..+.
T Consensus 4 i~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik 36 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVK 36 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEE
Confidence 5699999999999999999887 66665553
No 127
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=91.27 E-value=0.08 Score=59.53 Aligned_cols=66 Identities=18% Similarity=0.261 Sum_probs=54.4
Q ss_pred chhHHHHHHHhhhhhhccccccc-ccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccCC
Q 001076 461 SDITKNVLIASTYVHLKCNNFAK-YASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1163)
Q Consensus 461 se~Tk~~L~~~~~~hLk~~~~~k-~~~~l~~~s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~~ 530 (1163)
=|+.|.+|--|.|=|.|.-.+.. .-..+.+. -|||-||+|+ -.-.|||+||+.++||..++|.+.|
T Consensus 19 Q~~AKk~lsvav~nhyrR~~~~~~~~~ei~ks--NILliGPTGv--GKTlLAr~LAk~l~VPFv~~daT~f 85 (443)
T d1g41a_ 19 QADAKRAVAIALRNRWRRMQLQEPLRHEVTPK--NILMIGPTGV--GKTEIARRLAKLANAPFIKVEATKF 85 (443)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCC--CEEEECCTTS--SHHHHHHHHHHHTTCCEEEEEGGGG
T ss_pred cHHHHHHHHHHHHHHHHHhhcccccccccccc--cEEEECCCCC--CHHHHHHHHHHHhCCCEEEeeccee
Confidence 48999999999999987754432 22345544 6999999994 6778999999999999999999998
No 128
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.11 E-value=0.35 Score=46.83 Aligned_cols=24 Identities=33% Similarity=0.616 Sum_probs=21.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
+.|+|.|+||+|||+|..+|...-
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~~ 27 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTDS 27 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHSS
T ss_pred CEEEEECCCCCCHHHHHHHHhCCC
Confidence 379999999999999999998653
No 129
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=91.01 E-value=0.24 Score=51.22 Aligned_cols=24 Identities=29% Similarity=0.483 Sum_probs=21.1
Q ss_pred CceEEEEcCCCChHHHHHHHHHHH
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
...|+|.|.||+|||+|..+|..+
T Consensus 32 ~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 32 SLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CcEEEEECCCCCcHHHHHHHHhCC
Confidence 357999999999999999999754
No 130
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.00 E-value=0.059 Score=53.51 Aligned_cols=26 Identities=23% Similarity=0.285 Sum_probs=22.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCc
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGAN 1011 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~p 1011 (1163)
-|-|.|++|+|||++|+.|+..++..
T Consensus 4 iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 4 LIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHhchh
Confidence 36799999999999999999998653
No 131
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=90.77 E-value=0.061 Score=52.27 Aligned_cols=25 Identities=20% Similarity=0.474 Sum_probs=22.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhC
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAG 1009 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg 1009 (1163)
+=|+|.||+|+|||+|++.|+.+..
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 3489999999999999999998873
No 132
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.62 E-value=0.18 Score=47.71 Aligned_cols=22 Identities=23% Similarity=0.487 Sum_probs=19.8
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|++|+|||+|+..+...
T Consensus 5 Ki~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4899999999999999998764
No 133
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=90.57 E-value=0.093 Score=51.13 Aligned_cols=29 Identities=28% Similarity=0.391 Sum_probs=25.0
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHhCCc
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEAGAN 1011 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eLg~p 1011 (1163)
+..-|+|.|+=|+|||++++++++.+|..
T Consensus 32 ~g~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 32 KAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred CCeEEEEecCCCccHHHHHHHHHhhcccc
Confidence 33458999999999999999999999753
No 134
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=90.51 E-value=0.37 Score=45.65 Aligned_cols=22 Identities=45% Similarity=0.593 Sum_probs=19.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~ 1006 (1163)
..|+|.|++|+|||+|...+..
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 4599999999999999998854
No 135
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=90.49 E-value=0.14 Score=48.21 Aligned_cols=22 Identities=32% Similarity=0.510 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|++|+|||+|...+...
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 6999999999999999998643
No 136
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=90.30 E-value=0.066 Score=53.70 Aligned_cols=24 Identities=38% Similarity=0.447 Sum_probs=21.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-++|+||||+|||++|-.+|...
T Consensus 37 ~~~li~G~pGsGKT~~~lq~~~~~ 60 (254)
T d1pzna2 37 AITEVFGEFGSGKTQLAHTLAVMV 60 (254)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHh
Confidence 458999999999999999998765
No 137
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=90.19 E-value=0.5 Score=44.82 Aligned_cols=23 Identities=22% Similarity=0.485 Sum_probs=20.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
..|+|.|.+|+|||+|+..+...
T Consensus 5 ~KivlvG~~~vGKTsli~~~~~~ 27 (168)
T d1u8za_ 5 HKVIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCcCHHHHHHHHHhC
Confidence 46999999999999999998753
No 138
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=90.09 E-value=0.15 Score=48.67 Aligned_cols=22 Identities=27% Similarity=0.395 Sum_probs=19.7
Q ss_pred ceEEEEcCCCChHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~ 1006 (1163)
..|+|.|++|+|||+|...+..
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~~ 34 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLKL 34 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTTC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 4699999999999999998864
No 139
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=90.08 E-value=0.76 Score=44.88 Aligned_cols=18 Identities=50% Similarity=0.743 Sum_probs=15.6
Q ss_pred ceEEEEcCCCChHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAK 1002 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LAr 1002 (1163)
+++++.+|+|+|||+.|.
T Consensus 41 ~~~il~apTGsGKT~~a~ 58 (202)
T d2p6ra3 41 KNLLLAMPTAAGKTLLAE 58 (202)
T ss_dssp SCEEEECSSHHHHHHHHH
T ss_pred CCEEEEcCCCCchhHHHH
Confidence 469999999999998763
No 140
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=90.05 E-value=0.13 Score=56.29 Aligned_cols=77 Identities=31% Similarity=0.468 Sum_probs=58.4
Q ss_pred hHHHHHhcccCCccccccccccccccchhHHHHHHHhhhhhhcccccccccC-----------------CCCCCCCceee
Q 001076 435 FKDSLQEGILGPENIEVSFESFPYYLSDITKNVLIASTYVHLKCNNFAKYAS-----------------DLPTMCPRILL 497 (1163)
Q Consensus 435 ~k~~l~~~i~~~~~~~vsf~~FPYylse~Tk~~L~~~~~~hLk~~~~~k~~~-----------------~l~~~s~rILL 497 (1163)
.+++|.+.||-- ++.|.++-.|.|-|.|...+.+-.+ +.++.| ||+
T Consensus 11 i~~~L~~~ViGQ---------------d~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~n--iLf 73 (364)
T d1um8a_ 11 LKAVLDNYVIGQ---------------EQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSN--ILL 73 (364)
T ss_dssp HHHHHHTTCCSC---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCC--EEE
T ss_pred HHHHhCCeecCh---------------HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcc--eee
Confidence 567788888743 7889999999999987644332211 344444 999
Q ss_pred cCCCCchHHHHHHHHHHHhhcCCeEEEEeccCC
Q 001076 498 SGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1163)
Q Consensus 498 sgpagsE~Yqe~LaKALA~~f~a~LLilDs~~~ 530 (1163)
-||+| --.--|||+||+++++++..+|.+-+
T Consensus 74 iGPTG--vGKTElAk~LA~~~~~~~ir~D~s~~ 104 (364)
T d1um8a_ 74 IGPTG--SGKTLMAQTLAKHLDIPIAISDATSL 104 (364)
T ss_dssp ECCTT--SSHHHHHHHHHHHTTCCEEEEEGGGC
T ss_pred eCCCC--ccHHHHHHHHHhhcccceeehhhhhc
Confidence 99999 45556899999999999999998665
No 141
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=90.01 E-value=0.31 Score=45.92 Aligned_cols=23 Identities=17% Similarity=0.369 Sum_probs=20.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
..|+|.|.+|+|||+|..++...
T Consensus 16 ~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 57999999999999999998754
No 142
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.71 E-value=0.11 Score=51.70 Aligned_cols=25 Identities=32% Similarity=0.303 Sum_probs=21.7
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHh
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
..-++|+||||+|||++|..+|...
T Consensus 37 G~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 37 MAITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp SEEEEEECCTTCTHHHHHHHHHHHT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHH
Confidence 3458999999999999999998654
No 143
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.65 E-value=0.27 Score=49.41 Aligned_cols=76 Identities=17% Similarity=0.072 Sum_probs=48.9
Q ss_pred cccccccccchhHHHHHHHhhhhhhcccc-ccccc-CCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccC
Q 001076 452 SFESFPYYLSDITKNVLIASTYVHLKCNN-FAKYA-SDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1163)
Q Consensus 452 sf~~FPYylse~Tk~~L~~~~~~hLk~~~-~~k~~-~~l~~~s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1163)
+|+++-. .++.+.-|...--.+..... -.++. ..=....+-+||+||+| .-.-++|+|||++++..+..++.+.
T Consensus 12 ~~~dlig--~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG--~GKTt~a~~la~~~~~~~~~~~~~~ 87 (253)
T d1sxja2 12 NLQQVCG--NKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPG--IGKTTAAHLVAQELGYDILEQNASD 87 (253)
T ss_dssp SGGGCCS--CHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTT--SSHHHHHHHHHHHTTCEEEEECTTS
T ss_pred CHHHhcC--CHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCC--CCHHHHHHHHHHHHHhhhhcccccc
Confidence 4666443 46666666554332211111 11222 22234457799999999 5688999999999999999888766
Q ss_pred CC
Q 001076 530 LP 531 (1163)
Q Consensus 530 ~~ 531 (1163)
..
T Consensus 88 ~~ 89 (253)
T d1sxja2 88 VR 89 (253)
T ss_dssp CC
T ss_pred ch
Confidence 54
No 144
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=89.54 E-value=0.72 Score=46.82 Aligned_cols=22 Identities=27% Similarity=0.397 Sum_probs=19.3
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
-++|+||...|||++.|+++-.
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~ 58 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALI 58 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHH
T ss_pred EEEEECCCccccchhhhhhHHH
Confidence 4899999999999999988644
No 145
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=89.47 E-value=0.096 Score=50.99 Aligned_cols=29 Identities=24% Similarity=0.344 Sum_probs=24.2
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi~I 1015 (1163)
=|-|+|++|+|||++|+.+ .+.|++++..
T Consensus 5 IIgitG~~gSGKstva~~l-~~~g~~~~~~ 33 (191)
T d1uf9a_ 5 IIGITGNIGSGKSTVAALL-RSWGYPVLDL 33 (191)
T ss_dssp EEEEEECTTSCHHHHHHHH-HHTTCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHH-HHCCCeEEEc
Confidence 3568999999999999988 5689887653
No 146
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=89.16 E-value=0.31 Score=49.35 Aligned_cols=56 Identities=16% Similarity=0.281 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhhcc-CCCeEEEEcchhhhhcCChhhHHHHHHHHhcCCCCEEEEEecccc
Q 001076 689 AINELFEVALNESK-SSPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQL 747 (1163)
Q Consensus 689 ~l~~l~evl~~e~k-~~P~IIffddid~~La~~~~~~~~i~s~L~~L~g~VivIgs~~~~ 747 (1163)
.++.+++.+..... .+.-||++||+|. |. .+.-+.|..+|+...+++++|+.+++.
T Consensus 99 ~ir~~~~~~~~~~~~~~~kviiIde~d~-l~--~~~q~~Llk~lE~~~~~~~~il~tn~~ 155 (239)
T d1njfa_ 99 DTRDLLDNVQYAPARGRFKVYLIDEVHM-LS--RHSFNALLKTLEEPPEHVKFLLATTDP 155 (239)
T ss_dssp HHHHHHHSCCCSCSSSSSEEEEEETGGG-SC--HHHHHHHHHHHHSCCTTEEEEEEESCG
T ss_pred HHHHHHHHHHhccccCCCEEEEEECccc-CC--HHHHHHHHHHHhcCCCCeEEEEEcCCc
Confidence 35555555433222 3456999999999 54 344467888999888899999998853
No 147
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=89.10 E-value=0.14 Score=50.61 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=27.1
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCCcEEEEec
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~ 1017 (1163)
.++|||.|++|+|||++|-++... |..++.=|.
T Consensus 14 g~gvl~~G~sG~GKStlal~l~~~-g~~lv~DD~ 46 (176)
T d1kkma_ 14 GLGVLITGDSGVGKSETALELVQR-GHRLIADDR 46 (176)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHT-TCEEEEEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEEecCe
Confidence 478999999999999999988865 877765443
No 148
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.03 E-value=0.47 Score=44.72 Aligned_cols=22 Identities=27% Similarity=0.528 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|+..+...
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999998764
No 149
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.84 E-value=0.27 Score=46.94 Aligned_cols=22 Identities=23% Similarity=0.459 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|++.|++|+|||+|+..+.+.
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHhcC
Confidence 4899999999999999998754
No 150
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=88.75 E-value=0.17 Score=50.37 Aligned_cols=29 Identities=21% Similarity=0.390 Sum_probs=23.4
Q ss_pred EEEEcCCCChHHHHHHHHHHHh--CCcEEEE
Q 001076 987 ILLFGPPGTGKTMLAKAVATEA--GANFINI 1015 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eL--g~pfi~I 1015 (1163)
|++.|++|+|||+|..++.+.+ +.....+
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~~~~~~~iv 33 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYV 33 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTTTSCEEEE
T ss_pred EEEEcCCCCcHHHHHHHHHHHHhhCCeEEEE
Confidence 7899999999999999998776 3344444
No 151
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=88.24 E-value=0.1 Score=49.02 Aligned_cols=36 Identities=14% Similarity=0.058 Sum_probs=31.4
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccC
Q 001076 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1163)
Q Consensus 492 s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1163)
+++|++.||+| --.-+|||+||++|+.+.+-.|...
T Consensus 7 ~K~I~i~G~~G--sGKTTla~~La~~~~~~~i~~~~~~ 42 (192)
T d1lw7a2 7 AKTVAILGGES--SGKSVLVNKLAAVFNTTSAWEYGRE 42 (192)
T ss_dssp CEEEEEECCTT--SHHHHHHHHHHHHTTCEEECCTTHH
T ss_pred ceEEEEECCCC--CCHHHHHHHHHHHhCCCeEeeehHH
Confidence 57899999999 5889999999999999988766554
No 152
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=88.19 E-value=0.65 Score=43.83 Aligned_cols=21 Identities=29% Similarity=0.594 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
.|.|.|++|+|||+|..+|..
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999999963
No 153
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=88.09 E-value=0.12 Score=50.92 Aligned_cols=24 Identities=21% Similarity=0.213 Sum_probs=21.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-++|+|+||+|||+++..+|..+
T Consensus 35 ~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 35 SVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHH
Confidence 458999999999999999998765
No 154
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=88.07 E-value=0.15 Score=50.03 Aligned_cols=30 Identities=27% Similarity=0.485 Sum_probs=24.8
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eLg~pfi~ 1014 (1163)
..+|||.|++|+|||++|-++.+. |..++.
T Consensus 15 g~gvli~G~sg~GKS~la~~l~~~-g~~li~ 44 (169)
T d1ko7a2 15 GVGVLITGDSGIGKSETALELIKR-GHRLVA 44 (169)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEEe
Confidence 478999999999999999887766 666553
No 155
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.01 E-value=0.2 Score=50.19 Aligned_cols=31 Identities=19% Similarity=0.270 Sum_probs=26.4
Q ss_pred EEEEcCCCChHHHHHHHHHHHh---CCcEEEEec
Q 001076 987 ILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eL---g~pfi~Id~ 1017 (1163)
|.|.|+.|+|||++++.|++.+ |.+++.+..
T Consensus 6 I~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~~ 39 (209)
T d1nn5a_ 6 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRF 39 (209)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 6777999999999999999877 788877653
No 156
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.98 E-value=0.16 Score=49.60 Aligned_cols=24 Identities=25% Similarity=0.564 Sum_probs=21.8
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
+.|+|.||+|+||++|++.|+++.
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~ 27 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKH 27 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHC
T ss_pred CcEEEECCCCCCHHHHHHHHHHhC
Confidence 469999999999999999999875
No 157
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.89 E-value=0.48 Score=44.55 Aligned_cols=22 Identities=14% Similarity=0.323 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|++|+|||+|+..+.+.
T Consensus 4 Kv~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999988753
No 158
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.86 E-value=1.1 Score=41.68 Aligned_cols=22 Identities=27% Similarity=0.439 Sum_probs=19.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|+..+...
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999998754
No 159
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.85 E-value=0.41 Score=45.53 Aligned_cols=22 Identities=32% Similarity=0.569 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|++|+|||+|+..+.+.
T Consensus 8 KI~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4899999999999999888763
No 160
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=87.68 E-value=0.95 Score=47.13 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=23.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEec
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~ 1017 (1163)
..-||+|..|+|||.+|-..+... |..+..+-.
T Consensus 105 m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~P 140 (264)
T d1gm5a3 105 MNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVP 140 (264)
T ss_dssp CCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECS
T ss_pred ceeeeeccccccccHHHHHHHHHHHhcccceeEEee
Confidence 567999999999999776654333 666555443
No 161
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=87.59 E-value=0.24 Score=48.31 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=27.3
Q ss_pred EEEEcCCCChHHHHHHHHHHHh---CCcEEEEecc
Q 001076 987 ILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eL---g~pfi~Id~s 1018 (1163)
|.|.|..|+||||+++.|++.+ |.+++.+.-+
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~P 37 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFP 37 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 6789999999999999999876 7788777544
No 162
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=87.43 E-value=0.14 Score=53.37 Aligned_cols=24 Identities=29% Similarity=0.433 Sum_probs=18.0
Q ss_pred ceEEEEcCCCChHHH-HHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTM-LAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~-LArALA~eL 1008 (1163)
.++|+.|+||||||+ |+..+++.+
T Consensus 25 g~~lV~g~aGSGKTt~l~~ri~~ll 49 (318)
T d1pjra1 25 GPLLIMAGAGSGKTRVLTHRIAYLM 49 (318)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCccHHHHHHHHHHHHH
Confidence 459999999999998 444455443
No 163
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=87.06 E-value=0.18 Score=49.83 Aligned_cols=32 Identities=28% Similarity=0.399 Sum_probs=26.2
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id 1016 (1163)
..+|||.|++|+|||++|.++... |..++.=|
T Consensus 15 g~gvli~G~sG~GKS~lal~l~~~-G~~lvaDD 46 (177)
T d1knxa2 15 GVGVLLTGRSGIGKSECALDLINK-NHLFVGDD 46 (177)
T ss_dssp TEEEEEEESSSSSHHHHHHHHHTT-TCEEEEEE
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHc-CCceecCC
Confidence 478999999999999999888754 77776544
No 164
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.86 E-value=1.6 Score=41.58 Aligned_cols=21 Identities=29% Similarity=0.457 Sum_probs=19.0
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
.|+|.|++|+|||+|+..+.+
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhc
Confidence 489999999999999998874
No 165
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=86.70 E-value=0.16 Score=52.31 Aligned_cols=17 Identities=29% Similarity=0.450 Sum_probs=14.6
Q ss_pred ceEEEEcCCCChHHHHH
Q 001076 985 KGILLFGPPGTGKTMLA 1001 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LA 1001 (1163)
.++|+.|+||||||+++
T Consensus 15 ~~~lI~g~aGTGKTt~l 31 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVI 31 (306)
T ss_dssp SEEEECCCTTSCHHHHH
T ss_pred CCEEEEeeCCccHHHHH
Confidence 46899999999999843
No 166
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=86.68 E-value=0.16 Score=50.64 Aligned_cols=28 Identities=39% Similarity=0.612 Sum_probs=23.4
Q ss_pred EEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001076 987 ILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eLg~pfi~I 1015 (1163)
|-|+|.+|+|||++|+.+. .+|++++..
T Consensus 6 IgitG~igSGKStv~~~l~-~~G~~vida 33 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFA-DLGINVIDA 33 (208)
T ss_dssp EEEECCTTSCHHHHHHHHH-HTTCEEEEH
T ss_pred EEEECCCcCCHHHHHHHHH-HCCCcEEEc
Confidence 5689999999999999875 789877653
No 167
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=86.66 E-value=0.38 Score=51.36 Aligned_cols=39 Identities=15% Similarity=0.110 Sum_probs=30.6
Q ss_pred CCCceEEEEcCCCChHHHHHHHHHHHhC-----CcEEEEecccc
Q 001076 982 KPCKGILLFGPPGTGKTMLAKAVATEAG-----ANFINISMSSI 1020 (1163)
Q Consensus 982 ~p~kgVLL~GPPGTGKT~LArALA~eLg-----~pfi~Id~seL 1020 (1163)
+.|--|-|.|++|+|||++|+.|+..+. ..+..+.+..+
T Consensus 78 k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F 121 (308)
T d1sq5a_ 78 RIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred CCCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeee
Confidence 3445688999999999999999999873 45666776654
No 168
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=86.64 E-value=0.16 Score=47.93 Aligned_cols=23 Identities=22% Similarity=0.374 Sum_probs=20.0
Q ss_pred CCceEEEEcCCCChHHHHHHHHH
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVA 1005 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA 1005 (1163)
....|+|.|++|+|||+|..++.
T Consensus 12 k~~kI~lvG~~~vGKTsLl~~l~ 34 (186)
T d1f6ba_ 12 KTGKLVFLGLDNAGKTTLLHMLK 34 (186)
T ss_dssp CCEEEEEEEETTSSHHHHHHHHS
T ss_pred CCCEEEEECCCCCCHHHHHHHHh
Confidence 34579999999999999999884
No 169
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=86.52 E-value=0.14 Score=50.75 Aligned_cols=29 Identities=28% Similarity=0.489 Sum_probs=24.2
Q ss_pred EEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001076 987 ILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eLg~pfi~Id 1016 (1163)
|-|+|+.|+|||++|+.+. ++|++++..|
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~~vidaD 33 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGVPLVDAD 33 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTCCEEEHH
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCeEEEch
Confidence 5589999999999999886 6898887544
No 170
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.78 E-value=0.21 Score=45.79 Aligned_cols=22 Identities=27% Similarity=0.505 Sum_probs=19.8
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|+||+|||+|...+...
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5899999999999999998764
No 171
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=85.59 E-value=0.21 Score=50.11 Aligned_cols=24 Identities=25% Similarity=0.393 Sum_probs=21.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhC
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAG 1009 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg 1009 (1163)
=++|.||+|+|||+|.+.|.....
T Consensus 4 livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 4 LYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHhhCC
Confidence 489999999999999999998863
No 172
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.52 E-value=0.64 Score=49.07 Aligned_cols=35 Identities=20% Similarity=0.323 Sum_probs=26.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh------CCcEEEEecccc
Q 001076 986 GILLFGPPGTGKTMLAKAVATEA------GANFINISMSSI 1020 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eL------g~pfi~Id~seL 1020 (1163)
=|-|.|++|+|||+|+..|...+ ...+..+++.++
T Consensus 29 iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~Ddf 69 (286)
T d1odfa_ 29 FIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDF 69 (286)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGG
T ss_pred EEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCC
Confidence 35689999999999999887665 345666666554
No 173
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=85.28 E-value=0.2 Score=48.52 Aligned_cols=29 Identities=21% Similarity=0.228 Sum_probs=25.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEE
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~pfi 1013 (1163)
.-|.|.|+.|+|||++++.|++.++...+
T Consensus 10 ~~I~ieG~~GsGKTTl~~~L~~~l~~~~~ 38 (197)
T d2vp4a1 10 FTVLIEGNIGSGKTTYLNHFEKYKNDICL 38 (197)
T ss_dssp EEEEEECSTTSCHHHHHHTTGGGTTTEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 45899999999999999999999865433
No 174
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.22 E-value=1.3 Score=41.72 Aligned_cols=21 Identities=29% Similarity=0.575 Sum_probs=19.0
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
.|+|.|++|+|||+|...+..
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHc
Confidence 489999999999999999865
No 175
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=85.12 E-value=1.2 Score=47.57 Aligned_cols=35 Identities=26% Similarity=0.388 Sum_probs=27.2
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHh---C--CcEEEEecc
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEA---G--ANFINISMS 1018 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eL---g--~pfi~Id~s 1018 (1163)
...|=|+||||+|||+|..+++..+ | +-++.+|.+
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDps 93 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPS 93 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred ceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCc
Confidence 3569999999999999999998776 3 345666643
No 176
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=85.05 E-value=0.31 Score=50.08 Aligned_cols=17 Identities=29% Similarity=0.307 Sum_probs=14.6
Q ss_pred CCceEEEEcCCCChHHH
Q 001076 983 PCKGILLFGPPGTGKTM 999 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~ 999 (1163)
..+.+|+.+|+|+|||+
T Consensus 8 ~~~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 8 KKRLTIMDLHPGAGKTK 24 (305)
T ss_dssp TTCEEEECCCTTSSTTT
T ss_pred cCCcEEEEECCCCCHHH
Confidence 34679999999999995
No 177
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=84.95 E-value=0.25 Score=45.67 Aligned_cols=23 Identities=30% Similarity=0.473 Sum_probs=20.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
-.|+|.|.||+|||+|..++...
T Consensus 6 ~kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 6 MRILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHhCC
Confidence 35999999999999999998754
No 178
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.78 E-value=1 Score=44.63 Aligned_cols=15 Identities=40% Similarity=0.496 Sum_probs=14.0
Q ss_pred ceEEEEcCCCChHHH
Q 001076 985 KGILLFGPPGTGKTM 999 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~ 999 (1163)
+.+++..|+|+|||+
T Consensus 41 ~dvl~~a~TGsGKTl 55 (206)
T d1veca_ 41 RDILARAKNGTGKSG 55 (206)
T ss_dssp CCEEEECCSSSTTHH
T ss_pred CCEEeeccCcccccc
Confidence 579999999999997
No 179
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=84.68 E-value=0.46 Score=48.59 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=30.0
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecc
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~s 1018 (1163)
.++-+++.|.=|+|||++|.++|..+ |..+.-+|+.
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~D 45 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTD 45 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 45778999999999999999998777 7777777754
No 180
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=84.64 E-value=0.72 Score=46.04 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=25.7
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh-----CCcEEEEeccc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA-----GANFINISMSS 1019 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL-----g~pfi~Id~se 1019 (1163)
..|||.|..|+|||+|.+.+...- |+....++...
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~~~~pTiG~~~~~~~~~~ 46 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRILHVVLTSGIFETKFQVDK 46 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHCCCCCSCEEEEEEETT
T ss_pred CEEEEECCCCCCHHHHHHHHhcCCcCCCCCeEEEEEEECc
Confidence 469999999999999999885433 55555555443
No 181
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=84.31 E-value=1 Score=41.56 Aligned_cols=22 Identities=27% Similarity=0.585 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|.|.|.||+|||+|..+|..+
T Consensus 2 kI~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999765
No 182
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=84.22 E-value=1.8 Score=40.53 Aligned_cols=30 Identities=23% Similarity=0.364 Sum_probs=23.0
Q ss_pred EEEcCCCChHHH-HHHHHH--HHhCCcEEEEec
Q 001076 988 LLFGPPGTGKTM-LAKAVA--TEAGANFINISM 1017 (1163)
Q Consensus 988 LL~GPPGTGKT~-LArALA--~eLg~pfi~Id~ 1017 (1163)
+++||-.+|||+ |.+.+- ...|..++.+..
T Consensus 6 ~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp 38 (139)
T d2b8ta1 6 FITGPMFAGKTAELIRRLHRLEYADVKYLVFKP 38 (139)
T ss_dssp EEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEccccCHHHHHHHHHHHHHHHCCCcEEEEEE
Confidence 789999999999 777763 344777776664
No 183
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.14 E-value=1.2 Score=41.88 Aligned_cols=21 Identities=43% Similarity=0.817 Sum_probs=18.6
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
.|+|.|.+|+|||+|+..+..
T Consensus 3 Ki~lvG~~~vGKTsLi~~~~~ 23 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARIFGG 23 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCcCHHHHHHHHhC
Confidence 489999999999999998864
No 184
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=84.14 E-value=0.34 Score=52.78 Aligned_cols=33 Identities=27% Similarity=0.543 Sum_probs=26.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEec
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~ 1017 (1163)
+++++.|++|+|||.+++.++..+ |.+++.+|.
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~ 86 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDP 86 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 689999999999999887765444 777777764
No 185
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=83.66 E-value=0.36 Score=47.58 Aligned_cols=28 Identities=29% Similarity=0.343 Sum_probs=23.3
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh---CCcEE
Q 001076 986 GILLFGPPGTGKTMLAKAVATEA---GANFI 1013 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eL---g~pfi 1013 (1163)
=|.|.|+.|+|||++++.|++.+ |...+
T Consensus 4 fIviEG~dGsGKsT~~~~L~~~L~~~g~~~~ 34 (210)
T d4tmka_ 4 YIVIEGLEGAGKTTARNVVVETLEQLGIRDM 34 (210)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 37899999999999999999887 55433
No 186
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=83.36 E-value=0.46 Score=46.06 Aligned_cols=33 Identities=24% Similarity=0.250 Sum_probs=28.1
Q ss_pred ceEEEEcC-CCChHHHHHHHHHHHh---CCcEEEEec
Q 001076 985 KGILLFGP-PGTGKTMLAKAVATEA---GANFINISM 1017 (1163)
Q Consensus 985 kgVLL~GP-PGTGKT~LArALA~eL---g~pfi~Id~ 1017 (1163)
+.++++|- +|+|||+++..||..+ |..+..+|.
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 57899999 5999999999888777 888888874
No 187
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.77 E-value=0.44 Score=47.55 Aligned_cols=29 Identities=14% Similarity=0.134 Sum_probs=25.2
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCCcE
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEAGANF 1012 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eLg~pf 1012 (1163)
|+-|.|.|+-|+|||++++.|++.++...
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~ 30 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWH 30 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcC
Confidence 46689999999999999999999986443
No 188
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=82.62 E-value=0.29 Score=49.08 Aligned_cols=29 Identities=24% Similarity=0.185 Sum_probs=24.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi~ 1014 (1163)
-|-|+|+.|+|||++|+.++...|+.++.
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~g~~~i~ 31 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNYSAVKYQ 31 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSCEEECC
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCCeEEc
Confidence 37899999999999999999988865543
No 189
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=82.54 E-value=1 Score=47.62 Aligned_cols=71 Identities=21% Similarity=0.305 Sum_probs=50.6
Q ss_pred hHHHHHhcccCCccccccccccccccchhHHHHHHHhhhhhhcccccccccCCCCCCCC--ceeecCCCCchHHHHHHHH
Q 001076 435 FKDSLQEGILGPENIEVSFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCP--RILLSGPAGSEIYQETLAK 512 (1163)
Q Consensus 435 ~k~~l~~~i~~~~~~~vsf~~FPYylse~Tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~--rILLsgpagsE~Yqe~LaK 512 (1163)
.++.|.+.|+-- |+.+..|..+.+.|... +. .+..| -+||.||+| --...|||
T Consensus 16 l~~~L~~~viGQ---------------~~a~~~v~~~v~~~~~~--l~------~~~~p~~~~lf~Gp~G--vGKT~lak 70 (315)
T d1r6bx3 16 LGDRLKMLVFGQ---------------DKAIEALTEAIKMARAG--LG------HEHKPVGSFLFAGPTG--VGKTEVTV 70 (315)
T ss_dssp HHHHHTTTSCSC---------------HHHHHHHHHHHHHHHTT--CS------CTTSCSEEEEEECSTT--SSHHHHHH
T ss_pred HHHHhCCeecCh---------------HHHHHHHHHHHHHHHcc--CC------CCCCCceEEEEECCCc--chhHHHHH
Confidence 455666666543 77888887776655322 11 11122 389999999 57889999
Q ss_pred HHHhhcCCeEEEEeccCC
Q 001076 513 ALAKHFSARLLIVDSLLL 530 (1163)
Q Consensus 513 ALA~~f~a~LLilDs~~~ 530 (1163)
+||+.++.+++.+|.+.+
T Consensus 71 ~la~~l~~~~i~~d~s~~ 88 (315)
T d1r6bx3 71 QLSKALGIELLRFDMSEY 88 (315)
T ss_dssp HHHHHHTCEEEEEEGGGC
T ss_pred HHHhhccCCeeEeccccc
Confidence 999999999999998765
No 190
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.54 E-value=0.7 Score=43.84 Aligned_cols=22 Identities=41% Similarity=0.545 Sum_probs=18.1
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|++.|++|+|||+|...+.+.
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC--
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999887654
No 191
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=82.48 E-value=0.92 Score=44.76 Aligned_cols=31 Identities=26% Similarity=0.278 Sum_probs=25.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi~Id 1016 (1163)
+.+|.+|+|+|||.+|-+++.+++.+.+.+-
T Consensus 87 ~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~ 117 (206)
T d2fz4a1 87 RGCIVLPTGSGKTHVAMAAINELSTPTLIVV 117 (206)
T ss_dssp EEEEEESSSTTHHHHHHHHHHHSCSCEEEEE
T ss_pred CcEEEeCCCCCceehHHhHHHHhcCceeEEE
Confidence 4678899999999999999999977766554
No 192
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.50 E-value=0.39 Score=45.34 Aligned_cols=22 Identities=23% Similarity=0.460 Sum_probs=19.8
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|+..+.+.
T Consensus 6 KivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999998764
No 193
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.35 E-value=0.89 Score=43.50 Aligned_cols=19 Identities=37% Similarity=0.614 Sum_probs=17.9
Q ss_pred eEEEEcCCCChHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAV 1004 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArAL 1004 (1163)
.|+|.|.+|+|||+|...+
T Consensus 4 KivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 5899999999999999988
No 194
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=81.32 E-value=1 Score=48.04 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=27.9
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh-----CCcEEEEeccc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA-----GANFINISMSS 1019 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL-----g~pfi~Id~se 1019 (1163)
..|=|+||||+|||+|..+++..+ ..-++.+|.+.
T Consensus 52 ~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss 91 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSS 91 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGG
T ss_pred eEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeeccccc
Confidence 569999999999999999998765 34567777644
No 195
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=80.14 E-value=0.46 Score=45.03 Aligned_cols=22 Identities=32% Similarity=0.440 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|++|+|||+|...+.+.
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHcC
Confidence 4899999999999999998764
No 196
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.75 E-value=0.48 Score=44.84 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=20.1
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh
Q 001076 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.|++.|.+|+|||+|+..+.+.-
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~~ 30 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKGQ 30 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCcCHHHHHHHHHhCC
Confidence 58999999999999999988543
No 197
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=79.55 E-value=0.72 Score=45.96 Aligned_cols=32 Identities=25% Similarity=0.206 Sum_probs=27.2
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEEec
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi~Id~ 1017 (1163)
=|.|.|+-|+||||+++.|++.+...+..+.-
T Consensus 5 ~I~iEG~DGsGKST~~~~L~~~L~~~~~~~~~ 36 (214)
T d1tmka_ 5 LILIEGLDRTGKTTQCNILYKKLQPNCKLLKF 36 (214)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTTTSEEEEES
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHhCCEEEEE
Confidence 38899999999999999999999776665543
No 198
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.53 E-value=0.46 Score=45.04 Aligned_cols=22 Identities=36% Similarity=0.603 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|...+.+.
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999999863
No 199
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.93 E-value=0.52 Score=44.85 Aligned_cols=22 Identities=27% Similarity=0.524 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|++.|++|+|||+|+..+.+.
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999998653
No 200
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.70 E-value=0.54 Score=44.55 Aligned_cols=22 Identities=32% Similarity=0.575 Sum_probs=19.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|++|+|||+|...+...
T Consensus 4 Ki~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 4 KLAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 5899999999999999988764
No 201
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.47 E-value=0.55 Score=44.28 Aligned_cols=21 Identities=29% Similarity=0.381 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
.|+|.|.+|+|||+|+..+..
T Consensus 5 KivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999998875
No 202
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=78.18 E-value=0.29 Score=49.34 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=30.2
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccCC
Q 001076 494 RILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1163)
Q Consensus 494 rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~~ 530 (1163)
-|||.||+| --.-+||||||..++...++++...+
T Consensus 34 ~ilL~GpPG--tGKT~la~~la~~~~~~~~~i~~d~~ 68 (273)
T d1gvnb_ 34 AFLLGGQPG--SGKTSLRSAIFEETQGNVIVIDNDTF 68 (273)
T ss_dssp EEEEECCTT--SCTHHHHHHHHHHTTTCCEEECTHHH
T ss_pred EEEEECCCC--CCHHHHHHHHHHHhhcceEEEecHHH
Confidence 399999999 46778999999999999999987543
No 203
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=77.90 E-value=0.53 Score=44.62 Aligned_cols=21 Identities=24% Similarity=0.388 Sum_probs=19.3
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
.|+|.|+||+|||+|..+|..
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~ 22 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTG 22 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999999974
No 204
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.86 E-value=0.55 Score=44.46 Aligned_cols=22 Identities=23% Similarity=0.424 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|...+...
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4999999999999999988753
No 205
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=77.53 E-value=1.2 Score=43.83 Aligned_cols=93 Identities=12% Similarity=0.122 Sum_probs=52.7
Q ss_pred eeecCCCCCCCCCC-----CCCCCCCCcccccccccccCCCcchhhHHHHHHHHHHHHhhcc---CCCeEEEEcchhhhh
Q 001076 646 VRFDRSIPEGNNLG-----GFCEDDHGFFCTASSLRLDSSLGDEVDKLAINELFEVALNESK---SSPLIVFVKDIEKSL 717 (1163)
Q Consensus 646 V~Fd~~~~~~~~l~-----~~c~~~~~ff~~~~~~~~d~s~~~~~~~~~l~~l~evl~~e~k---~~P~IIffddid~~L 717 (1163)
++|.+|.|.|++.. .++.... ++. ..++...+........+..+........ .+.-||++||+|. +
T Consensus 38 lLl~Gp~G~GKttl~~~la~~l~~~~--~~~---~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~-~ 111 (227)
T d1sxjc2 38 LLFYGPPGTGKTSTIVALAREIYGKN--YSN---MVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADA-M 111 (227)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHHTTS--HHH---HEEEECTTSCCSHHHHHTHHHHHHHBCCSSSCSCEEEEETTGGG-S
T ss_pred EEEECCCCCChhHHHHHHHHHhhcCC--Ccc---eeEEecccccCCeeeeecchhhccccccccCCCeEEEEEecccc-c
Confidence 78889999999854 2211111 111 0111122222222233333333322211 4566999999999 3
Q ss_pred cCChhhHHHHHHHHhcCCCCEEEEEeccc
Q 001076 718 TGNNDAYGALKSKLENLPSNVVVIGSHTQ 746 (1163)
Q Consensus 718 a~~~~~~~~i~s~L~~L~g~VivIgs~~~ 746 (1163)
. .+....|...|+....++++|..++.
T Consensus 112 ~--~~~~~~Ll~~le~~~~~~~~~~~~~~ 138 (227)
T d1sxjc2 112 T--NAAQNALRRVIERYTKNTRFCVLANY 138 (227)
T ss_dssp C--HHHHHHHHHHHHHTTTTEEEEEEESC
T ss_pred h--hhHHHHHHHHhhhcccceeeccccCc
Confidence 3 44566788889988888888888874
No 206
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=77.53 E-value=0.48 Score=47.22 Aligned_cols=24 Identities=38% Similarity=0.555 Sum_probs=21.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-+.|.||.|+|||+|.+.|+..+
T Consensus 28 ei~~l~G~NGsGKSTLl~~i~gl~ 51 (200)
T d1sgwa_ 28 NVVNFHGPNGIGKTTLLKTISTYL 51 (200)
T ss_dssp CCEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCChHHHHHHHHhccc
Confidence 458899999999999999998765
No 207
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=77.47 E-value=0.6 Score=44.69 Aligned_cols=22 Identities=27% Similarity=0.576 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|+..+.+.
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999988753
No 208
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.43 E-value=0.52 Score=44.44 Aligned_cols=21 Identities=29% Similarity=0.528 Sum_probs=18.8
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
.|+|.|.+|+|||+|...+..
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 489999999999999998875
No 209
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.14 E-value=0.59 Score=44.47 Aligned_cols=22 Identities=23% Similarity=0.422 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|+..+.+.
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5999999999999999988754
No 210
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.11 E-value=0.64 Score=43.91 Aligned_cols=22 Identities=32% Similarity=0.495 Sum_probs=19.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|++|+|||+|+..+.+.
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4999999999999999988763
No 211
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=77.04 E-value=0.6 Score=43.84 Aligned_cols=22 Identities=36% Similarity=0.584 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|++.|.+|+|||+|+.++...
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999998753
No 212
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=76.96 E-value=0.53 Score=48.42 Aligned_cols=26 Identities=27% Similarity=0.339 Sum_probs=22.6
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
+...+-|.||+|+|||+|++.|+..+
T Consensus 28 ~Ge~vaIvG~sGsGKSTLl~ll~gl~ 53 (241)
T d2pmka1 28 QGEVIGIVGRSGSGKSTLTKLIQRFY 53 (241)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhcC
Confidence 34569999999999999999998766
No 213
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=76.85 E-value=0.55 Score=48.58 Aligned_cols=26 Identities=27% Similarity=0.422 Sum_probs=22.3
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
+...+-|.||+|+|||+|++.|+...
T Consensus 40 ~Ge~iaivG~sGsGKSTLl~ll~gl~ 65 (253)
T d3b60a1 40 AGKTVALVGRSGSGKSTIASLITRFY 65 (253)
T ss_dssp TTCEEEEEECTTSSHHHHHHHHTTTT
T ss_pred CCCEEEEECCCCChHHHHHHHHhccc
Confidence 33569999999999999999998665
No 214
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.77 E-value=0.62 Score=43.80 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=20.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
..|+|.|++|+|||+|...+.+.
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCcCHHHHHHHHHhC
Confidence 46999999999999999998754
No 215
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.73 E-value=0.62 Score=43.56 Aligned_cols=21 Identities=24% Similarity=0.396 Sum_probs=19.0
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
.|+|.|.+|+|||+|+..+.+
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999999875
No 216
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.58 E-value=0.31 Score=48.42 Aligned_cols=25 Identities=20% Similarity=0.244 Sum_probs=22.8
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhC
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAG 1009 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg 1009 (1163)
+-|.|.|+-|+|||++++.|++.+.
T Consensus 3 k~I~ieG~dGsGKST~~~~L~~~l~ 27 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFVNILKQLCE 27 (241)
T ss_dssp EEEEEECSTTSSHHHHHTTTGGGCT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHh
Confidence 4589999999999999999999884
No 217
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=76.37 E-value=0.73 Score=48.70 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=25.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecccc
Q 001076 986 GILLFGPPGTGKTMLAKAVATEA---GANFINISMSSI 1020 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~seL 1020 (1163)
=|-++|++|+|||++++++++.+ +.....+.+.++
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsf 43 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAF 43 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCC
Confidence 48999999999999999998876 667666766554
No 218
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=76.36 E-value=1.1 Score=45.57 Aligned_cols=33 Identities=33% Similarity=0.445 Sum_probs=26.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecc
Q 001076 986 GILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~s 1018 (1163)
=|+++|.=|+|||+++..||..+ |..+..+|+.
T Consensus 22 iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~D 57 (279)
T d1ihua2 22 LIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD 57 (279)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 37888999999999888887666 7788877764
No 219
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=76.32 E-value=0.67 Score=44.21 Aligned_cols=22 Identities=32% Similarity=0.451 Sum_probs=19.4
Q ss_pred CceEEEEcCCCChHHHHHHHHH
Q 001076 984 CKGILLFGPPGTGKTMLAKAVA 1005 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA 1005 (1163)
.-.|+|.|++|+|||+|...+.
T Consensus 17 ~~KI~lvG~~~vGKTsLi~~l~ 38 (182)
T d1moza_ 17 ELRILILGLDGAGKTTILYRLQ 38 (182)
T ss_dssp CEEEEEEEETTSSHHHHHHHTC
T ss_pred eEEEEEECCCCCCHHHHHHHHh
Confidence 3579999999999999998874
No 220
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.26 E-value=0.65 Score=43.97 Aligned_cols=21 Identities=33% Similarity=0.550 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
.|+|.|.+|+|||+|+..+..
T Consensus 7 KI~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 499999999999999998865
No 221
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=75.98 E-value=0.64 Score=47.78 Aligned_cols=26 Identities=27% Similarity=0.381 Sum_probs=22.2
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
+..-+-|.||+|+|||+|++.|+..+
T Consensus 27 ~Ge~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 27 PNSIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp TTEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhh
Confidence 34568999999999999999997655
No 222
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=75.91 E-value=1 Score=44.64 Aligned_cols=42 Identities=36% Similarity=0.384 Sum_probs=31.0
Q ss_pred CCCeEEEEcchhhhhcCChhhHHHHHHHHhcCCCCEEEEEecccc
Q 001076 703 SSPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQL 747 (1163)
Q Consensus 703 ~~P~IIffddid~~La~~~~~~~~i~s~L~~L~g~VivIgs~~~~ 747 (1163)
.++.||++||+|. +.. +....|...++.-..++++|+.+++.
T Consensus 108 ~~~~iilide~d~-~~~--~~~~~ll~~l~~~~~~~~~i~~~n~~ 149 (231)
T d1iqpa2 108 ASFKIIFLDEADA-LTQ--DAQQALRRTMEMFSSNVRFILSCNYS 149 (231)
T ss_dssp CSCEEEEEETGGG-SCH--HHHHHHHHHHHHTTTTEEEEEEESCG
T ss_pred CCceEEeehhhhh-cch--hHHHHHhhhcccCCcceEEEeccCCh
Confidence 5789999999999 433 22335666777767789999988853
No 223
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=75.89 E-value=0.67 Score=47.41 Aligned_cols=24 Identities=21% Similarity=0.506 Sum_probs=21.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-+-|.||+|+|||+|.+.|+...
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 32 EFVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCcchhhHhccCCC
Confidence 458999999999999999987654
No 224
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.88 E-value=0.71 Score=43.89 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=20.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
..|+|.|.+|+|||+|+..+.+.
T Consensus 3 ~KivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 35899999999999999988764
No 225
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.81 E-value=0.71 Score=48.46 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=22.5
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
+..-+-|.||.|+|||+|++.|+..+
T Consensus 61 ~Ge~vaivG~nGsGKSTLl~~i~Gl~ 86 (281)
T d1r0wa_ 61 KGEMLAITGSTGSGKTSLLMLILGEL 86 (281)
T ss_dssp TTCEEEEEESTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCChHHHHHHHHhCCC
Confidence 33558999999999999999998766
No 226
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=75.75 E-value=3.1 Score=40.90 Aligned_cols=57 Identities=25% Similarity=0.268 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhhcc-CCCeEEEEcchhhhhcCChhhHHHHHHHHhcCCCCEEEEEecccc
Q 001076 688 LAINELFEVALNESK-SSPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQL 747 (1163)
Q Consensus 688 ~~l~~l~evl~~e~k-~~P~IIffddid~~La~~~~~~~~i~s~L~~L~g~VivIgs~~~~ 747 (1163)
.+++.+.+.+...+. .+.-||+|||+|. +. .+.-++|..+|+.-+.++++|..++++
T Consensus 91 ~~ir~l~~~~~~~~~~~~~kviIide~d~-l~--~~a~n~Llk~lEep~~~~~fIl~t~~~ 148 (207)
T d1a5ta2 91 DAVREVTEKLNEHARLGGAKVVWVTDAAL-LT--DAAANALLKTLEEPPAETWFFLATREP 148 (207)
T ss_dssp HHHHHHHHHTTSCCTTSSCEEEEESCGGG-BC--HHHHHHHHHHHTSCCTTEEEEEEESCG
T ss_pred chhhHHhhhhhhccccCccceEEechhhh-hh--hhhhHHHHHHHHhhcccceeeeeecCh
Confidence 356777777655444 4677999999999 44 456678889999999999999888843
No 227
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=75.69 E-value=0.66 Score=47.80 Aligned_cols=22 Identities=32% Similarity=0.662 Sum_probs=19.6
Q ss_pred EEEEcCCCChHHHHHHHHHHHh
Q 001076 987 ILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eL 1008 (1163)
+-|.||.|+|||+|.+.|+..+
T Consensus 27 ~~liGpnGaGKSTll~~i~Gl~ 48 (240)
T d2onka1 27 CVLLGPTGAGKSVFLELIAGIV 48 (240)
T ss_dssp EEEECCTTSSHHHHHHHHHTSS
T ss_pred EEEECCCCChHHHHHHHHHcCC
Confidence 5578999999999999998766
No 228
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=75.67 E-value=0.79 Score=46.92 Aligned_cols=24 Identities=29% Similarity=0.567 Sum_probs=21.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-+-|.||.|+|||+|.+.|+...
T Consensus 27 ei~~liGpsGsGKSTLl~~i~Gl~ 50 (232)
T d2awna2 27 EFVVFVGPSGCGKSTLLRMIAGLE 50 (232)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCChHHHHHHHHhcCC
Confidence 458999999999999999998655
No 229
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.67 E-value=0.67 Score=47.87 Aligned_cols=26 Identities=31% Similarity=0.483 Sum_probs=22.2
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
+..-+-|.||.|+|||+|++.|+..+
T Consensus 39 ~Ge~vaivG~sGsGKSTLl~li~gl~ 64 (251)
T d1jj7a_ 39 PGEVTALVGPNGSGKSTVAALLQNLY 64 (251)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHhccc
Confidence 34569999999999999999997655
No 230
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=75.65 E-value=0.66 Score=47.73 Aligned_cols=24 Identities=33% Similarity=0.567 Sum_probs=21.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-+-|.||.|+|||+|++.|+...
T Consensus 30 e~~~liG~sGaGKSTll~~i~gl~ 53 (240)
T d1g2912 30 EFMILLGPSGCGKTTTLRMIAGLE 53 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCChHHHHHHHHhcCC
Confidence 458999999999999999998665
No 231
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.54 E-value=0.74 Score=43.81 Aligned_cols=22 Identities=32% Similarity=0.564 Sum_probs=19.8
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|++.|.+|+|||+|...+...
T Consensus 9 Ki~vvG~~~vGKTsli~~l~~~ 30 (177)
T d1x3sa1 9 KILIIGESGVGKSSLLLRFTDD 30 (177)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5999999999999999998753
No 232
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.39 E-value=0.76 Score=43.25 Aligned_cols=22 Identities=23% Similarity=0.453 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|...+.+.
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~~ 27 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVED 27 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999998753
No 233
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=75.39 E-value=0.68 Score=44.65 Aligned_cols=22 Identities=23% Similarity=0.366 Sum_probs=19.7
Q ss_pred ceEEEEcCCCChHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~ 1006 (1163)
+.|.|.|+||+|||+|..+|.+
T Consensus 24 ~~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 24 PEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp CEEEEEEBTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHhcC
Confidence 3699999999999999999963
No 234
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.24 E-value=0.77 Score=43.18 Aligned_cols=22 Identities=23% Similarity=0.486 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|+..+...
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 4899999999999999998754
No 235
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=74.84 E-value=0.8 Score=43.12 Aligned_cols=22 Identities=18% Similarity=0.442 Sum_probs=19.4
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|...+...
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999988754
No 236
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=73.98 E-value=0.74 Score=47.37 Aligned_cols=24 Identities=25% Similarity=0.353 Sum_probs=21.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-+-|.||+|+|||+|++.|+...
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~Gl~ 55 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNLLE 55 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHcCCc
Confidence 458999999999999999997655
No 237
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=73.94 E-value=0.8 Score=46.05 Aligned_cols=22 Identities=32% Similarity=0.518 Sum_probs=19.0
Q ss_pred EEEEcCCCChHHHHHHHHHHHh
Q 001076 987 ILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eL 1008 (1163)
.+|+|+.|+|||+|..||+-.+
T Consensus 26 n~IvG~NGsGKStiL~Ai~~~l 47 (292)
T g1f2t.1 26 NLIIGQNGSGKSSLLDAILVGL 47 (292)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 3899999999999999997543
No 238
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.87 E-value=0.86 Score=43.57 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|...+...
T Consensus 7 KivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 5899999999999999988764
No 239
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=73.66 E-value=0.81 Score=46.77 Aligned_cols=24 Identities=29% Similarity=0.582 Sum_probs=21.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-+-|.||.|+|||+|.+.|+...
T Consensus 27 e~~~liGpsGaGKSTll~~l~Gl~ 50 (229)
T d3d31a2 27 EYFVILGPTGAGKTLFLELIAGFH 50 (229)
T ss_dssp CEEEEECCCTHHHHHHHHHHHTSS
T ss_pred CEEEEECCCCCcHHHHHHHHhcCc
Confidence 458999999999999999998765
No 240
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=73.22 E-value=0.98 Score=46.39 Aligned_cols=24 Identities=33% Similarity=0.558 Sum_probs=21.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-+-|.||.|+|||+|.+.|+...
T Consensus 33 e~~~liGpsGaGKSTLl~~i~Gl~ 56 (239)
T d1v43a3 33 EFLVLLGPSGCGKTTTLRMIAGLE 56 (239)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCChHHHHHHHHHcCC
Confidence 458999999999999999998766
No 241
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.05 E-value=0.88 Score=43.20 Aligned_cols=21 Identities=38% Similarity=0.634 Sum_probs=18.8
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
.|+|.|.+|+|||+|+..+..
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999998864
No 242
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=73.01 E-value=3.1 Score=39.20 Aligned_cols=23 Identities=26% Similarity=0.426 Sum_probs=20.2
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh
Q 001076 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.|+|.|..|+|||+|...+...-
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~~ 26 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRIIH 26 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 58999999999999999986554
No 243
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=72.80 E-value=0.97 Score=42.75 Aligned_cols=23 Identities=22% Similarity=0.380 Sum_probs=20.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
-.|+|.|.+|+|||+|+..+.+.
T Consensus 5 ~Ki~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 5 YKLVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 45899999999999999998763
No 244
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=72.71 E-value=0.77 Score=42.50 Aligned_cols=32 Identities=38% Similarity=0.535 Sum_probs=27.4
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEEEe
Q 001076 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1163)
Q Consensus 493 ~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilD 526 (1163)
|.|+|+||+|| -.-++|++||+.|+.+.+-.|
T Consensus 5 ~~I~i~G~pGs--GKTTia~~La~~l~~~~i~~~ 36 (173)
T d1rkba_ 5 PNILLTGTPGV--GKTTLGKELASKSGLKYINVG 36 (173)
T ss_dssp CCEEEECSTTS--SHHHHHHHHHHHHCCEEEEHH
T ss_pred CEEEEECCCCC--CHHHHHHHHHHHHCCcEEech
Confidence 78999999994 778999999999999876443
No 245
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=72.63 E-value=8.1 Score=40.09 Aligned_cols=24 Identities=38% Similarity=0.535 Sum_probs=21.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
..++|+|++|+|||+|+..+++..
T Consensus 69 Qr~~If~~~g~GKt~l~~~i~~~~ 92 (276)
T d2jdid3 69 GKIGLFGGAGVGKTVLIMELINNV 92 (276)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CEEEeeCCCCCCHHHHHHHHHHHH
Confidence 369999999999999999998774
No 246
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=72.52 E-value=0.9 Score=44.02 Aligned_cols=22 Identities=32% Similarity=0.573 Sum_probs=19.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|++|+|||+|+..+.+.
T Consensus 8 KivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 8 KLLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhhC
Confidence 4899999999999999998753
No 247
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=72.17 E-value=0.77 Score=47.30 Aligned_cols=24 Identities=29% Similarity=0.551 Sum_probs=21.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-+-|.||.|+|||+|++.|+...
T Consensus 32 e~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 32 ERFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTSS
T ss_pred CEEEEECCCCCcHHHHHHHHHcCc
Confidence 468999999999999999998755
No 248
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=72.15 E-value=5.2 Score=41.56 Aligned_cols=25 Identities=20% Similarity=0.226 Sum_probs=22.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhC
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAG 1009 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg 1009 (1163)
++|-|.|..|+|||+|+.++....|
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~g 31 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYTG 31 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhcC
Confidence 6899999999999999999987654
No 249
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=72.11 E-value=0.94 Score=43.42 Aligned_cols=22 Identities=32% Similarity=0.483 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|+..+.+.
T Consensus 4 KivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999988764
No 250
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=71.82 E-value=1.3 Score=40.92 Aligned_cols=34 Identities=15% Similarity=0.237 Sum_probs=29.4
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEec
Q 001076 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDS 527 (1163)
Q Consensus 492 s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs 527 (1163)
++=|+|+||+|| -.-++||+||+.|+.+.+.+|.
T Consensus 3 ~kiI~l~G~~Gs--GKsTva~~L~~~l~~~~~~~~~ 36 (178)
T d1qhxa_ 3 TRMIILNGGSSA--GKSGIVRCLQSVLPEPWLAFGV 36 (178)
T ss_dssp CCEEEEECCTTS--SHHHHHHHHHHHSSSCEEEEEH
T ss_pred CeEEEEECCCCC--CHHHHHHHHHHHcCCCeEEeec
Confidence 455899999994 6779999999999999888886
No 251
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=71.78 E-value=0.94 Score=46.94 Aligned_cols=24 Identities=21% Similarity=0.430 Sum_probs=21.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-+-|.||.|+|||+|+++|+...
T Consensus 29 Ei~~iiG~sGsGKSTLl~~i~Gl~ 52 (258)
T d1b0ua_ 29 DVISIIGSSGSGKSTFLRCINFLE 52 (258)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCcHHHHHHHHHcCc
Confidence 458999999999999999998644
No 252
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=71.71 E-value=1.1 Score=43.13 Aligned_cols=31 Identities=29% Similarity=0.495 Sum_probs=21.3
Q ss_pred eEEEEcCCCChHHHHHHHHHHH----hCCcEEEEe
Q 001076 986 GILLFGPPGTGKTMLAKAVATE----AGANFINIS 1016 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e----Lg~pfi~Id 1016 (1163)
++|+++|+|+|||.++..++.. .+..++.+-
T Consensus 25 n~lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~ 59 (200)
T d1wp9a1 25 NCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLA 59 (200)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHHHHSCSCEEEEC
T ss_pred CeEEEeCCCCcHHHHHHHHHHHHHHhcCCcEEEEc
Confidence 5889999999999866655543 244454443
No 253
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=71.70 E-value=3.6 Score=38.47 Aligned_cols=22 Identities=27% Similarity=0.489 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|..|+|||+|...+...
T Consensus 4 KivllG~~~vGKTsl~~r~~~~ 25 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKII 25 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhhC
Confidence 5899999999999999887543
No 254
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=71.68 E-value=0.61 Score=44.26 Aligned_cols=21 Identities=33% Similarity=0.521 Sum_probs=9.1
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
.|+|.|.+|+|||+|+.++..
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEEECCCCC-----------
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999988864
No 255
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=71.53 E-value=1.6 Score=44.28 Aligned_cols=34 Identities=15% Similarity=0.453 Sum_probs=28.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~s 1018 (1163)
+.|-++|.=|+|||++|..||..+ |..+.-+|+.
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D 38 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 357789999999999998887776 7888888864
No 256
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.97 E-value=1 Score=43.25 Aligned_cols=22 Identities=27% Similarity=0.375 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|...+.+.
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhhC
Confidence 4899999999999999988754
No 257
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=70.88 E-value=0.39 Score=45.04 Aligned_cols=22 Identities=32% Similarity=0.347 Sum_probs=20.1
Q ss_pred EEEEcCCCChHHHHHHHHHHHh
Q 001076 987 ILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eL 1008 (1163)
.+|+||.|+|||++..||.-.+
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L 48 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTAL 48 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 5889999999999999998776
No 258
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.53 E-value=1.1 Score=43.28 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~e 1007 (1163)
.|+|.|.+|+|||+|+..+...
T Consensus 5 KvvllG~~~vGKTSli~r~~~~ 26 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTTN 26 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999887654
No 259
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=69.93 E-value=1.1 Score=42.09 Aligned_cols=21 Identities=29% Similarity=0.439 Sum_probs=19.3
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
-|+|.|.||+|||+|..+|.+
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 489999999999999999974
No 260
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=69.28 E-value=0.74 Score=47.71 Aligned_cols=26 Identities=19% Similarity=0.286 Sum_probs=22.1
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
+...+.|.||+|+|||+|++.|+...
T Consensus 43 ~Ge~vaivG~sGsGKSTLl~ll~gl~ 68 (255)
T d2hyda1 43 KGETVAFVGMSGGGKSTLINLIPRFY 68 (255)
T ss_dssp TTCEEEEECSTTSSHHHHHTTTTTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHHhcC
Confidence 34569999999999999999987655
No 261
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=69.07 E-value=1.1 Score=41.52 Aligned_cols=33 Identities=36% Similarity=0.304 Sum_probs=28.7
Q ss_pred eeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccC
Q 001076 495 ILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1163)
Q Consensus 495 ILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1163)
|+|.||+|| -.-++||+||+.|+.+.+.+|.-.
T Consensus 7 I~l~G~~Gs--GKSTia~~La~~lg~~~~~~~~d~ 39 (176)
T d1zp6a1 7 LLLSGHPGS--GKSTIAEALANLPGVPKVHFHSDD 39 (176)
T ss_dssp EEEEECTTS--CHHHHHHHHHTCSSSCEEEECTTH
T ss_pred EEEECCCCC--CHHHHHHHHHHHhCCCEEEecHHH
Confidence 789999994 677899999999999999988633
No 262
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=68.91 E-value=4.7 Score=39.53 Aligned_cols=25 Identities=28% Similarity=0.319 Sum_probs=21.5
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHH
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
|.-+|.+.|.++.|||+|+.+|...
T Consensus 2 ~~ini~iiGhvd~GKSTL~~~Ll~~ 26 (204)
T d2c78a3 2 PHVNVGTIGHVDHGKTTLTAALTYV 26 (204)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCcHHHHHHHHHHH
Confidence 5567899999999999999999644
No 263
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=68.75 E-value=1.2 Score=45.18 Aligned_cols=23 Identities=30% Similarity=0.430 Sum_probs=19.4
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh
Q 001076 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eL 1008 (1163)
-.+|+|+.|+|||++..||.-.+
T Consensus 25 ~~vi~G~NgsGKTtileAI~~~l 47 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLLDAILVGL 47 (369)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHH
Confidence 35899999999999999996533
No 264
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=68.68 E-value=3.1 Score=42.29 Aligned_cols=32 Identities=28% Similarity=0.210 Sum_probs=23.8
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEe
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINIS 1016 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id 1016 (1163)
...||+|.+|+|||.++-..+... |..++.+-
T Consensus 77 ~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~ 111 (233)
T d2eyqa3 77 MDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLV 111 (233)
T ss_dssp CEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEEC
T ss_pred cCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEc
Confidence 578999999999999776655443 66665554
No 265
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=67.96 E-value=0.8 Score=42.90 Aligned_cols=21 Identities=14% Similarity=0.273 Sum_probs=19.0
Q ss_pred ceEEEEcCCCChHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVA 1005 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA 1005 (1163)
..|.|.|.|++|||+|..+|.
T Consensus 17 ~~I~lvG~~NvGKSSL~n~L~ 37 (188)
T d1puia_ 17 IEVAFAGRSNAGKSSALNTLT 37 (188)
T ss_dssp EEEEEEECTTSSHHHHHTTTC
T ss_pred CEEEEECCCCCCHHHHHHHHh
Confidence 469999999999999999884
No 266
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=67.47 E-value=1.1 Score=46.56 Aligned_cols=22 Identities=23% Similarity=0.412 Sum_probs=19.8
Q ss_pred EEEEcCCCChHHHHHHHHHHHh
Q 001076 987 ILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eL 1008 (1163)
-+|+||.|+|||++..||+-.+
T Consensus 29 nvi~G~NGsGKS~il~AI~~~L 50 (329)
T g1xew.1 29 TAIVGANGSGKSNIGDAILFVL 50 (329)
T ss_dssp EEEEECTTSSSHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 4999999999999999997665
No 267
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=67.44 E-value=1.5 Score=41.60 Aligned_cols=23 Identities=26% Similarity=0.501 Sum_probs=20.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
-.|.|.|.+|+|||+|..++...
T Consensus 9 ~kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 9 IKVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
Confidence 46899999999999999999754
No 268
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=67.39 E-value=1.1 Score=40.40 Aligned_cols=30 Identities=27% Similarity=0.485 Sum_probs=25.7
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEE
Q 001076 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLI 524 (1163)
Q Consensus 493 ~rILLsgpagsE~Yqe~LaKALA~~f~a~LLi 524 (1163)
+-|.|.||+| --.-++||+||+.|+.+.+-
T Consensus 3 k~I~l~G~~G--sGKSTvak~La~~L~~~~id 32 (169)
T d1kaga_ 3 RNIFLVGPMG--AGKSTIGRQLAQQLNMEFYD 32 (169)
T ss_dssp CCEEEECCTT--SCHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCC--CCHHHHHHHHHHHhCCCeEe
Confidence 3599999999 46779999999999999753
No 269
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=67.16 E-value=1.1 Score=42.62 Aligned_cols=21 Identities=33% Similarity=0.504 Sum_probs=18.7
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
.|.|.|.||+|||+|..+|..
T Consensus 3 ~VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp SEEEECCGGGCHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 488999999999999999853
No 270
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=66.85 E-value=1.2 Score=45.62 Aligned_cols=24 Identities=33% Similarity=0.423 Sum_probs=21.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-+-|.||.|+|||+|.++|+..+
T Consensus 33 ei~~liGpnGaGKSTl~~~i~Gl~ 56 (240)
T d1ji0a_ 33 QIVTLIGANGAGKTTTLSAIAGLV 56 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCcHHHHHHHHhCCC
Confidence 458999999999999999997655
No 271
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=66.80 E-value=10 Score=38.93 Aligned_cols=24 Identities=33% Similarity=0.583 Sum_probs=21.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
++|-|.|..|+|||+|+.++....
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~ 26 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKT 26 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred eEEEEEcCCCCcHHHHHHHHHHHc
Confidence 578999999999999999997655
No 272
>d1vioa2 d.66.1.5 (A:0-57) Pseudouridine synthase RsuA N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=66.53 E-value=1.5 Score=35.00 Aligned_cols=26 Identities=27% Similarity=0.533 Sum_probs=21.8
Q ss_pred CceEEEcCeecCCCceEEeeCCCEEEE
Q 001076 197 KGEVEVNGNVHPKDSQVVLRGGDELVF 223 (1163)
Q Consensus 197 ~G~v~vNg~~~~k~~~~~L~~gDev~f 223 (1163)
.|.|+|||+.+.+. .+.++.||+|.|
T Consensus 25 ~g~V~Vng~~v~~~-~~~v~~~d~I~~ 50 (58)
T d1vioa2 25 QSAVKINGEIVKSG-SVQISQEDEIYF 50 (58)
T ss_dssp TTCEEETTEECCCT-TCEECTTSCEEE
T ss_pred cCeEEECCEEeCCC-CCCCCCCCEEEE
Confidence 46799999999986 466788999988
No 273
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=66.53 E-value=1.1 Score=42.54 Aligned_cols=20 Identities=35% Similarity=0.532 Sum_probs=18.2
Q ss_pred eEEEEcCCCChHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVA 1005 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA 1005 (1163)
.|-|.|+|++|||+|..+|.
T Consensus 3 ~VaiiG~~nvGKSSLin~L~ 22 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVS 22 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSE
T ss_pred eEEEECCCCCCHHHHHHHHh
Confidence 48899999999999999984
No 274
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=65.78 E-value=5.9 Score=38.32 Aligned_cols=31 Identities=23% Similarity=0.377 Sum_probs=24.8
Q ss_pred EEEcCCCChHHHHHHHHHHHh---CCcEEEEecc
Q 001076 988 LLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1163)
Q Consensus 988 LL~GPPGTGKT~LArALA~eL---g~pfi~Id~s 1018 (1163)
+..|..|+|||++|..+|..+ |..+..+|+.
T Consensus 6 v~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D 39 (232)
T d1hyqa_ 6 VASGKGGTGKTTITANLGVALAQLGHDVTIVDAD 39 (232)
T ss_dssp EEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 344889999999999888776 7888888763
No 275
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=64.02 E-value=1.7 Score=44.34 Aligned_cols=24 Identities=33% Similarity=0.459 Sum_probs=21.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-+-|.||.|+|||+|.+.|+..+
T Consensus 29 ei~glvG~nGaGKSTLl~~l~G~~ 52 (238)
T d1vpla_ 29 EIFGLIGPNGAGKTTTLRIISTLI 52 (238)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHhcCC
Confidence 447799999999999999998666
No 276
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=63.43 E-value=6.3 Score=37.24 Aligned_cols=21 Identities=33% Similarity=0.536 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~ 1006 (1163)
+|-|.|.|++|||+|..+|..
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 588999999999999999974
No 277
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=63.31 E-value=5.4 Score=37.30 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=21.9
Q ss_pred EEEEcCCCChHHH-HHHHH--HHHhCCcEEEEe
Q 001076 987 ILLFGPPGTGKTM-LAKAV--ATEAGANFINIS 1016 (1163)
Q Consensus 987 VLL~GPPGTGKT~-LArAL--A~eLg~pfi~Id 1016 (1163)
-|++||-.+|||+ |.+.+ ....|..++.+.
T Consensus 10 ~lI~GpMfSGKTteLi~~~~~~~~~g~~vl~i~ 42 (141)
T d1xx6a1 10 EVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFK 42 (141)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeccccHHHHHHHHHHHHhhhcCCcEEEEE
Confidence 3889999999999 66655 333477776655
No 278
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.02 E-value=3.5 Score=38.15 Aligned_cols=31 Identities=26% Similarity=0.338 Sum_probs=21.8
Q ss_pred EEEEcCCCChHHH-HHHHHHHH--hCCcEEEEec
Q 001076 987 ILLFGPPGTGKTM-LAKAVATE--AGANFINISM 1017 (1163)
Q Consensus 987 VLL~GPPGTGKT~-LArALA~e--Lg~pfi~Id~ 1017 (1163)
-|++||-.+|||+ |.+.+-+. .|..++.+..
T Consensus 5 ~li~GpMfsGKTt~Li~~~~~~~~~g~~v~~ikp 38 (133)
T d1xbta1 5 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKY 38 (133)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred EEEEecccCHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 4789999999999 55555333 3666666653
No 279
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=62.78 E-value=1.7 Score=44.77 Aligned_cols=24 Identities=29% Similarity=0.530 Sum_probs=20.9
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.-+-|.||.|+|||+|++.|+...
T Consensus 31 ei~~liG~nGaGKSTLl~~i~Gl~ 54 (254)
T d1g6ha_ 31 DVTLIIGPNGSGKSTLINVITGFL 54 (254)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCcHHHHHHHHHCCC
Confidence 458999999999999999997655
No 280
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.62 E-value=2.1 Score=40.89 Aligned_cols=25 Identities=20% Similarity=0.236 Sum_probs=21.2
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHh
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
--.|++.|.+|+|||+|...+...-
T Consensus 5 ~~ki~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 5 ELRLGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp EEEEEEECCTTTTHHHHHHHHHHSC
T ss_pred cEEEEEECCCCCCHHHHHHHHHhCC
Confidence 3579999999999999999887643
No 281
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=62.52 E-value=2 Score=45.21 Aligned_cols=24 Identities=38% Similarity=0.606 Sum_probs=21.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
..++|.|++|+|||+|+..+++..
T Consensus 44 Qr~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 44 QRGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHH
T ss_pred CeeeEeCCCCCCHHHHHHHHHHHH
Confidence 469999999999999999998765
No 282
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=62.33 E-value=2 Score=43.58 Aligned_cols=27 Identities=26% Similarity=0.276 Sum_probs=22.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGAN 1011 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~p 1011 (1163)
+..+|.|++|+|||+|..+|.......
T Consensus 96 kt~~~~G~SGVGKSTLiN~L~~~~~~~ 122 (225)
T d1u0la2 96 KISTMAGLSGVGKSSLLNAINPGLKLR 122 (225)
T ss_dssp SEEEEECSTTSSHHHHHHHHSTTCCCC
T ss_pred CeEEEECCCCCCHHHHHHhhcchhhhh
Confidence 467999999999999999997554433
No 283
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=62.31 E-value=3 Score=42.61 Aligned_cols=34 Identities=15% Similarity=0.394 Sum_probs=26.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL---g~pfi~Id~s 1018 (1163)
+.|.++|.=|+|||++|..||..+ |..+.-+|+.
T Consensus 3 r~IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlID~D 39 (289)
T d2afhe1 3 RQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 346779999999999777776555 8888877763
No 284
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=62.17 E-value=5.4 Score=38.77 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=28.3
Q ss_pred CCCeEEEEcchhhhhcCChhhHHHHHHHHhcCCCCEEEEEeccc
Q 001076 703 SSPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQ 746 (1163)
Q Consensus 703 ~~P~IIffddid~~La~~~~~~~~i~s~L~~L~g~VivIgs~~~ 746 (1163)
...-||++||+|.+ . .+..+.+...++.-....++|..++.
T Consensus 107 ~~~~viiiDe~d~l-~--~~~~~~l~~~~~~~~~~~~~i~~~~~ 147 (237)
T d1sxjd2 107 PPYKIIILDEADSM-T--ADAQSALRRTMETYSGVTRFCLICNY 147 (237)
T ss_dssp CSCEEEEETTGGGS-C--HHHHHHHHHHHHHTTTTEEEEEEESC
T ss_pred cCceEEEEeccccc-C--HHHHHHHhhccccccccccccccccc
Confidence 34458999999994 3 34445666677767777777777764
No 285
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=62.07 E-value=2.3 Score=45.56 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=25.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhC--CcEEEE
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAG--ANFINI 1015 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg--~pfi~I 1015 (1163)
..|.|.|+-|+|||++++.|++.++ ..++.+
T Consensus 7 ~rI~iEG~iGsGKSTl~~~L~~~l~~~~~v~~~ 39 (333)
T d1p6xa_ 7 VRIYLDGVYGIGKSTTGRVMASAASGGSPTLYF 39 (333)
T ss_dssp EEEEEECSTTSSHHHHHHHHHSGGGCSSCEEEE
T ss_pred EEEEEECCccCCHHHHHHHHHHHhccCCCeEEE
Confidence 4689999999999999999999884 344444
No 286
>d1dm9a_ d.66.1.3 (A:) Heat shock protein 15 kD {Escherichia coli [TaxId: 562]}
Probab=61.32 E-value=2.1 Score=38.44 Aligned_cols=31 Identities=19% Similarity=0.296 Sum_probs=25.0
Q ss_pred CCceEEEcCeecCCCceEEeeCCCEEEEccCCC
Q 001076 196 GKGEVEVNGNVHPKDSQVVLRGGDELVFSPSGK 228 (1163)
Q Consensus 196 ~~G~v~vNg~~~~k~~~~~L~~gDev~f~~~~~ 228 (1163)
.+|.|.|||+.+ | ....++.||.|.|...+.
T Consensus 28 ~~G~V~vNg~~v-K-ps~~vk~GDvI~i~~~~~ 58 (104)
T d1dm9a_ 28 EGGKVHYNGQRS-K-PSKIVELNATLTLRQGND 58 (104)
T ss_dssp HTTCEEETTEEC-C-TTCBCCTTCEEEEEETTE
T ss_pred HcCCeeeCCeec-c-ccccCCCCCEEEEEeCCe
Confidence 357899999987 4 357889999999977754
No 287
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=61.27 E-value=1.5 Score=44.53 Aligned_cols=22 Identities=36% Similarity=0.570 Sum_probs=19.9
Q ss_pred ceEEEEcCCCChHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~ 1006 (1163)
.-+-|.||.|+|||+|.+.|+.
T Consensus 26 ei~~iiG~nGaGKSTLl~~l~G 47 (231)
T d1l7vc_ 26 EILHLVGPNGAGKSTLLARMAG 47 (231)
T ss_dssp CEEECBCCTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCcHHHHHHHHhC
Confidence 4589999999999999999986
No 288
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=60.48 E-value=1.9 Score=40.44 Aligned_cols=30 Identities=33% Similarity=0.535 Sum_probs=26.9
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001076 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1163)
Q Consensus 492 s~rILLsgpagsE~Yqe~LaKALA~~f~a~LL 523 (1163)
.|||.|.||+| --.-+++|+||+.++.+.+
T Consensus 1 ~p~IvliG~~G--~GKSTig~~La~~l~~~fi 30 (165)
T d2iyva1 1 APKAVLVGLPG--SGKSTIGRRLAKALGVGLL 30 (165)
T ss_dssp CCSEEEECSTT--SSHHHHHHHHHHHHTCCEE
T ss_pred CCcEEEECCCC--CCHHHHHHHHHHHhCCCeE
Confidence 48999999999 4788999999999999965
No 289
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=59.37 E-value=9.9 Score=37.13 Aligned_cols=43 Identities=23% Similarity=0.338 Sum_probs=33.0
Q ss_pred CCeEEEEcchhhhhcCChhhHHHHHHHHhcCCCCEEEEEecccccc
Q 001076 704 SPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQLDS 749 (1163)
Q Consensus 704 ~P~IIffddid~~La~~~~~~~~i~s~L~~L~g~VivIgs~~~~d~ 749 (1163)
...||+|||+|. |. .+..+.+...++...+++++|.++++.+.
T Consensus 131 ~~~iiiide~d~-l~--~~~~~~l~~~~e~~~~~~~~Il~tn~~~~ 173 (252)
T d1sxje2 131 RYKCVIINEANS-LT--KDAQAALRRTMEKYSKNIRLIMVCDSMSP 173 (252)
T ss_dssp CCEEEEEECTTS-SC--HHHHHHHHHHHHHSTTTEEEEEEESCSCS
T ss_pred CceEEEeccccc-cc--cccchhhhcccccccccccceeeeccccc
Confidence 456999999999 43 44556688888888899998988885443
No 290
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=58.51 E-value=2.5 Score=44.74 Aligned_cols=23 Identities=30% Similarity=0.611 Sum_probs=19.9
Q ss_pred EEEEcCCCChHHHHHHHHHHHhC
Q 001076 987 ILLFGPPGTGKTMLAKAVATEAG 1009 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eLg 1009 (1163)
-+|+||.|+|||.+..||.-.+|
T Consensus 28 ~~i~G~NGsGKS~ileAi~~~lg 50 (427)
T d1w1wa_ 28 TSIIGPNGSGKSNMMDAISFVLG 50 (427)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 48999999999999999976554
No 291
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=56.69 E-value=7 Score=42.78 Aligned_cols=55 Identities=24% Similarity=0.314 Sum_probs=42.6
Q ss_pred cccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEec
Q 001076 948 FDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1163)
Q Consensus 948 fddI~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~ 1017 (1163)
|..-|-+..+++.|.+-+.. + .+..+|.|-+|+|||+++.++++..+.|++.+..
T Consensus 10 ~~p~gDQP~aI~~l~~~l~~----------g-----~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~ 64 (413)
T d1t5la1 10 YEPQGDQPQAIAKLVDGLRR----------G-----VKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAH 64 (413)
T ss_dssp SCCCTTHHHHHHHHHHHHHH----------T-----CSEEEEEECTTSCHHHHHHHHHHHHTCCEEEECS
T ss_pred CCCCCCCHHHHHHHHHHHhc----------C-----CCcEEEeCCCCcHHHHHHHHHHHHhCCCEEEEeC
Confidence 44445667778777776631 1 2568999999999999999999999999888764
No 292
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.20 E-value=2.1 Score=42.74 Aligned_cols=54 Identities=20% Similarity=0.316 Sum_probs=33.2
Q ss_pred CCCCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCC--CCCCceEEEEcCCCChHHH
Q 001076 943 DIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTM 999 (1163)
Q Consensus 943 e~~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l--~~p~kgVLL~GPPGTGKT~ 999 (1163)
++..+|++++-.+.+.+.|.+. -+.+|.......+ .-..+.+++..|+|+|||.
T Consensus 9 e~i~sF~~l~L~~~l~~~L~~~---g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTl 64 (218)
T d2g9na1 9 EIVDSFDDMNLSESLLRGIYAY---GFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTA 64 (218)
T ss_dssp CCCCCGGGSCCCHHHHHHHHHH---TCCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHH
T ss_pred CccCCHHHCCCCHHHHHHHHHC---CCCCCCHHHHHHHHHHHcCCCEEEEcccchhhhh
Confidence 4456899987777777777553 1233322222111 0112579999999999998
No 293
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=56.13 E-value=5.1 Score=38.81 Aligned_cols=31 Identities=26% Similarity=0.462 Sum_probs=25.0
Q ss_pred EEEE-cCCCChHHHHHHHHHHHh---CCcEEEEec
Q 001076 987 ILLF-GPPGTGKTMLAKAVATEA---GANFINISM 1017 (1163)
Q Consensus 987 VLL~-GPPGTGKT~LArALA~eL---g~pfi~Id~ 1017 (1163)
|-++ +.-|+|||++|..+|..+ |.++.-+|+
T Consensus 5 Iav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~ 39 (237)
T d1g3qa_ 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDG 39 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 5455 678999999999888776 888888885
No 294
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=54.65 E-value=2.5 Score=42.17 Aligned_cols=23 Identities=39% Similarity=0.462 Sum_probs=20.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh
Q 001076 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eL 1008 (1163)
-.+|+|.-|+|||+|.+.+++..
T Consensus 5 v~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 5 VTLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEEESSSSSCHHHHHHHHHSC
T ss_pred EEEEeeCCCCCHHHHHHHHHhcC
Confidence 47999999999999999998765
No 295
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=54.12 E-value=4.3 Score=40.08 Aligned_cols=24 Identities=42% Similarity=0.444 Sum_probs=20.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
.|.||.=++|+|||..|-+++..+
T Consensus 32 ~g~iLaDe~GlGKT~~~i~~~~~~ 55 (230)
T d1z63a1 32 FGICLADDMGLGKTLQTIAVFSDA 55 (230)
T ss_dssp CCEEECCCTTSCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCChHHHHHHhhhhh
Confidence 478999999999999887776655
No 296
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=53.31 E-value=3 Score=41.37 Aligned_cols=21 Identities=29% Similarity=0.464 Sum_probs=17.0
Q ss_pred ceEEEEcCCCChHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVA 1005 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA 1005 (1163)
+.+++.+|+|+|||+.+-..+
T Consensus 59 ~~~~i~apTGsGKT~~~~~~~ 79 (237)
T d1gkub1 59 ESFAATAPTGVGKTSFGLAMS 79 (237)
T ss_dssp CCEECCCCBTSCSHHHHHHHH
T ss_pred CCEEEEecCCChHHHHHHHHH
Confidence 579999999999998655444
No 297
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=53.18 E-value=3 Score=38.37 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=27.7
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEEEec
Q 001076 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVDS 527 (1163)
Q Consensus 493 ~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs 527 (1163)
+-|+|.||+| --.-++||+||++++++.+-.|-
T Consensus 7 ~iivl~G~~G--sGKsT~a~~La~~l~~~~~~~d~ 39 (171)
T d1knqa_ 7 HIYVLMGVSG--SGKSAVASEVAHQLHAAFLDGDF 39 (171)
T ss_dssp EEEEEECSTT--SCHHHHHHHHHHHHTCEEEEGGG
T ss_pred eEEEEECCCC--CCHHHHHHHHHHHhCCCeechhh
Confidence 3467899999 47889999999999999876664
No 298
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=52.72 E-value=3.9 Score=37.15 Aligned_cols=28 Identities=29% Similarity=0.476 Sum_probs=23.9
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeE
Q 001076 493 PRILLSGPAGSEIYQETLAKALAKHFSARL 522 (1163)
Q Consensus 493 ~rILLsgpagsE~Yqe~LaKALA~~f~a~L 522 (1163)
+-|+|.||+| --.-++||+||++++-..
T Consensus 3 klI~i~G~~G--sGKTTva~~L~~~~~~~~ 30 (176)
T d2bdta1 3 KLYIITGPAG--VGKSTTCKRLAAQLDNSA 30 (176)
T ss_dssp EEEEEECSTT--SSHHHHHHHHHHHSSSEE
T ss_pred eEEEEECCCC--CCHHHHHHHHHHHcCCCE
Confidence 4599999999 578899999999998653
No 299
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=52.54 E-value=2 Score=43.84 Aligned_cols=26 Identities=35% Similarity=0.570 Sum_probs=19.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCC
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEAGA 1010 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eLg~ 1010 (1163)
+..+|.|++|+|||+|..+|..+...
T Consensus 98 ~~~vl~G~SGVGKSSLiN~L~~~~~~ 123 (231)
T d1t9ha2 98 KTTVFAGQSGVGKSSLLNAISPELGL 123 (231)
T ss_dssp SEEEEEESHHHHHHHHHHHHCC----
T ss_pred ceEEEECCCCccHHHHHHhhccHhHh
Confidence 45678899999999999999755443
No 300
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=52.12 E-value=2.6 Score=44.99 Aligned_cols=31 Identities=29% Similarity=0.306 Sum_probs=25.4
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCC---cEEEEe
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGA---NFINIS 1016 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~---pfi~Id 1016 (1163)
.|.|.|+-|+|||++++.|++.+.. +++.+.
T Consensus 7 rI~IEG~iGsGKSTl~~~L~~~l~~~g~~v~~~~ 40 (331)
T d1osna_ 7 RIYLDGAYGIGKTTAAEEFLHHFAITPNRILLIG 40 (331)
T ss_dssp EEEEEESSSSCTTHHHHHHHHTTTTSGGGEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhhcCCceEEEe
Confidence 5899999999999999999998843 444443
No 301
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.97 E-value=3.8 Score=40.10 Aligned_cols=33 Identities=27% Similarity=0.441 Sum_probs=26.1
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCe-----EEEEecc
Q 001076 494 RILLSGPAGSEIYQETLAKALAKHFSAR-----LLIVDSL 528 (1163)
Q Consensus 494 rILLsgpagsE~Yqe~LaKALA~~f~a~-----LLilDs~ 528 (1163)
-+||+||+| .-.-++|++||+.++.+ .+.++.+
T Consensus 38 ~~ll~Gp~G--~GKTt~a~~la~~l~~~~~~~~~~~~n~~ 75 (224)
T d1sxjb2 38 HMIISGMPG--IGKTTSVHCLAHELLGRSYADGVLELNAS 75 (224)
T ss_dssp CEEEECSTT--SSHHHHHHHHHHHHHGGGHHHHEEEECTT
T ss_pred eEEEECCCC--CCchhhHHHHHHHHhcccccccccccccc
Confidence 489999999 78899999999987754 5555544
No 302
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=51.73 E-value=2.3 Score=43.46 Aligned_cols=22 Identities=27% Similarity=0.478 Sum_probs=19.2
Q ss_pred EEEEcCCCChHHHHHHHHHHHh
Q 001076 987 ILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eL 1008 (1163)
.+|+||.|+|||++..||+-.+
T Consensus 27 nvlvG~NgsGKS~iL~Ai~~~l 48 (308)
T d1e69a_ 27 TAIVGPNGSGKSNIIDAIKWVF 48 (308)
T ss_dssp EEEECCTTTCSTHHHHHHHHTS
T ss_pred EEEECCCCCcHHHHHHHHHHHh
Confidence 5899999999999999996544
No 303
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=51.00 E-value=3.6 Score=45.98 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=17.1
Q ss_pred ceEEEEcCCCChHHHHH-HHHHHH
Q 001076 985 KGILLFGPPGTGKTMLA-KAVATE 1007 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LA-rALA~e 1007 (1163)
.++|+.|.+|||||+.+ ..++..
T Consensus 25 ~~~lV~A~AGSGKT~~lv~ri~~l 48 (623)
T g1qhh.1 25 GPLLIMAGAGSGKTRVLTHRIAYL 48 (623)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCEEEEEeCchHHHHHHHHHHHHH
Confidence 46899999999999944 445443
No 304
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=50.89 E-value=4.6 Score=39.86 Aligned_cols=54 Identities=22% Similarity=0.262 Sum_probs=32.9
Q ss_pred CCCCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCC--CCCCceEEEEcCCCChHHH
Q 001076 943 DIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTM 999 (1163)
Q Consensus 943 e~~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l--~~p~kgVLL~GPPGTGKT~ 999 (1163)
++..+|++++-.++..+.|.+.= +.++....+..+ ....+.+++..|+|+|||+
T Consensus 7 ~~~~sF~~l~l~~~l~~~L~~~g---~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~ 62 (212)
T d1qdea_ 7 KVVYKFDDMELDENLLRGVFGYG---FEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTG 62 (212)
T ss_dssp CCCCCGGGGTCCHHHHHHHHHHT---CCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHH
T ss_pred ccccChhhCCCCHHHHHHHHHCC---CCCCCHHHHHHHHHHHcCCCEEeecccccchhh
Confidence 44567999877777777776532 222222111111 0112579999999999998
No 305
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=50.49 E-value=2 Score=39.46 Aligned_cols=26 Identities=23% Similarity=0.383 Sum_probs=22.1
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCe
Q 001076 494 RILLSGPAGSEIYQETLAKALAKHFSAR 521 (1163)
Q Consensus 494 rILLsgpagsE~Yqe~LaKALA~~f~a~ 521 (1163)
-|+|+|++| --.-++||+||+.++++
T Consensus 8 ~I~l~G~~G--sGKTTia~~La~~L~~~ 33 (183)
T d1m8pa3 8 TIFLTGYMN--SGKDAIARALQVTLNQQ 33 (183)
T ss_dssp EEEEECSTT--SSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCC--CCHHHHHHHHHHHHhhc
Confidence 389999999 47789999999998764
No 306
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=48.85 E-value=3.7 Score=38.40 Aligned_cols=31 Identities=39% Similarity=0.432 Sum_probs=26.6
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEEEEe
Q 001076 494 RILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1163)
Q Consensus 494 rILLsgpagsE~Yqe~LaKALA~~f~a~LLilD 526 (1163)
.|.|.||+| --.-+++|+||++|+.+.+=+|
T Consensus 2 ~I~liG~~G--sGKsTi~k~La~~l~~~~~d~d 32 (161)
T d1viaa_ 2 NIVFIGFMG--SGKSTLARALAKDLDLVFLDSD 32 (161)
T ss_dssp CEEEECCTT--SCHHHHHHHHHHHHTCEEEEHH
T ss_pred cEEEECCCC--CCHHHHHHHHHHHhCCCEEecC
Confidence 599999999 4778999999999999977444
No 307
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=47.98 E-value=4.2 Score=37.97 Aligned_cols=29 Identities=17% Similarity=0.291 Sum_probs=24.9
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEEE
Q 001076 494 RILLSGPAGSEIYQETLAKALAKHFSARLLI 524 (1163)
Q Consensus 494 rILLsgpagsE~Yqe~LaKALA~~f~a~LLi 524 (1163)
||+|.||||| -.-++||.||+++|...+=
T Consensus 2 ~I~i~G~pGS--GKsT~a~~La~~~~~~~i~ 30 (182)
T d1zina1 2 NLVLMGLPGA--GKGTQAEKIVAAYGIPHIS 30 (182)
T ss_dssp EEEEECSTTS--SHHHHHHHHHHHHCCCEEE
T ss_pred EEEEECCCCC--CHHHHHHHHHHHHCCceec
Confidence 6999999994 6778999999999887653
No 308
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=46.92 E-value=3.6 Score=43.88 Aligned_cols=25 Identities=24% Similarity=0.412 Sum_probs=19.8
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCC
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGA 1010 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~ 1010 (1163)
.|.|.|+-|+|||++++.+++.++.
T Consensus 6 rI~IEG~iGsGKTTl~~~La~~l~~ 30 (329)
T d1e2ka_ 6 RVYIDGPHGMGKTTTTQLLVALGSR 30 (329)
T ss_dssp EEEECSCTTSSHHHHHHHHTC----
T ss_pred EEEEECCcCCCHHHHHHHHHHHhCC
Confidence 4889999999999999999988743
No 309
>d1whha_ b.34.10.1 (A:) CLIP170-related 59kda protein CLIPR-59 (1500005P14Rik) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.63 E-value=21 Score=31.55 Aligned_cols=60 Identities=23% Similarity=0.278 Sum_probs=33.0
Q ss_pred CcccccCCceeeeccCCCCcccCCCCCCCCCcccCeeeeccccCCC--CceeeeecCCCCCCCCCC------CCCCCCCC
Q 001076 596 NYTFKKGDRVKFVGNVTSGTTVQPTLRGPGIGFRGRVILPFEDNDF--SKIGVRFDRSIPEGNNLG------GFCEDDHG 667 (1163)
Q Consensus 596 ~~~~~~gdrvk~~g~~~~~~~~~~~~~~p~~g~rg~v~~~~e~n~~--~kvgV~Fd~~~~~~~~l~------~~c~~~~~ 667 (1163)
...++-||||..-|. .+|.|.++-..... --|||-||.|.++ +|.. =.|..+++
T Consensus 23 ~~~~~vGdrV~v~~~-----------------~~G~vryvG~~~~~~g~~~GVEld~p~Gk-ndGt~~G~rYF~C~p~~G 84 (102)
T d1whha_ 23 GAKAEVGDQVLVAGQ-----------------KQGIVRFYGKTDFAPGYWYGIELDQPTGK-HDGSVFGVRYFTCAPRHG 84 (102)
T ss_dssp CCSSCTTSEEEETTT-----------------EEEEEEEEEECSSSSSEEEEEECSSSCCS-SSSEETTEECSCCCTTTE
T ss_pred cCcCcccCEEEECCC-----------------ceEEEEEecccCCCCCeEEEEEeCCCCCC-CCCEECCEEEEecCCCcE
Confidence 356788999876332 13444433322222 3489999998753 2222 35666666
Q ss_pred cccccc
Q 001076 668 FFCTAS 673 (1163)
Q Consensus 668 ff~~~~ 673 (1163)
-|++..
T Consensus 85 iFv~~~ 90 (102)
T d1whha_ 85 VFAPAS 90 (102)
T ss_dssp EEECGG
T ss_pred EEeCHH
Confidence 555443
No 310
>d1v8ca1 d.15.3.1 (A:1-87) MoaD-related protein, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=46.34 E-value=4.7 Score=34.33 Aligned_cols=27 Identities=22% Similarity=0.220 Sum_probs=22.1
Q ss_pred eEEEcCeecC--CCceEEeeCCCEEEEcc
Q 001076 199 EVEVNGNVHP--KDSQVVLRGGDELVFSP 225 (1163)
Q Consensus 199 ~v~vNg~~~~--k~~~~~L~~gDev~f~~ 225 (1163)
.|+|||+.+. .+-..+|+.||||+|-.
T Consensus 54 ~i~vng~~i~~~~~~~~~l~~gdeV~i~P 82 (87)
T d1v8ca1 54 SVFLEGRDVRYLQGLSTPLSPGATLDLFP 82 (87)
T ss_dssp EEEETTEEGGGTTGGGCBCCTTCEEEEEC
T ss_pred EEEEcCeeeecccCCcccCCCCCEEEEEC
Confidence 4889999885 46688999999998743
No 311
>d1kska3 d.66.1.5 (A:1-59) Pseudouridine synthase RsuA N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=45.90 E-value=5.5 Score=31.64 Aligned_cols=26 Identities=15% Similarity=0.298 Sum_probs=20.4
Q ss_pred CceEEEcCeecCCCceEEeeCCCEEEE
Q 001076 197 KGEVEVNGNVHPKDSQVVLRGGDELVF 223 (1163)
Q Consensus 197 ~G~v~vNg~~~~k~~~~~L~~gDev~f 223 (1163)
+|-|.|||+.+.+.... +..||+|.|
T Consensus 24 ~g~V~Vng~~v~~~~~~-V~~~d~I~~ 49 (59)
T d1kska3 24 GNRVTVDGEIVRNAAFK-LLPEHDVAY 49 (59)
T ss_dssp TTCEEETTEECCCTTCE-ECTTCCEEE
T ss_pred cCcEEECCEEeecCCcC-cCCCCEEEE
Confidence 46799999999987443 467899877
No 312
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=45.52 E-value=4.9 Score=37.59 Aligned_cols=30 Identities=20% Similarity=0.366 Sum_probs=26.4
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001076 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1163)
Q Consensus 492 s~rILLsgpagsE~Yqe~LaKALA~~f~a~LL 523 (1163)
+..|.|.||+| --.-+++|.||+++|.+.+
T Consensus 2 ~~~Iil~G~~G--sGKSTia~~LA~~Lg~~~i 31 (170)
T d1e6ca_ 2 TEPIFMVGARG--CGMTTVGRELARALGYEFV 31 (170)
T ss_dssp CCCEEEESCTT--SSHHHHHHHHHHHHTCEEE
T ss_pred CCCEEEECCCC--CCHHHHHHHHHHHhCCCEE
Confidence 46799999999 4778999999999999966
No 313
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=45.21 E-value=27 Score=33.76 Aligned_cols=24 Identities=38% Similarity=0.239 Sum_probs=20.7
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcC
Q 001076 494 RILLSGPAGSEIYQETLAKALAKHFS 519 (1163)
Q Consensus 494 rILLsgpagsE~Yqe~LaKALA~~f~ 519 (1163)
-++|+||+| .-.-++++++|+++.
T Consensus 48 ~l~l~GppG--tGKT~l~~~l~~~l~ 71 (287)
T d1w5sa2 48 IYGSIGRVG--IGKTTLAKFTVKRVS 71 (287)
T ss_dssp EEECTTCCS--SSHHHHHHHHHHHHH
T ss_pred EEEeECCCC--CCHHHHHHHHHHHHH
Confidence 367899999 689999999999974
No 314
>d1vjka_ d.15.3.1 (A:) Molybdopterin synthase subunit MoaD {Pyrococcus furiosus [TaxId: 2261]}
Probab=44.91 E-value=5.6 Score=33.64 Aligned_cols=24 Identities=29% Similarity=0.346 Sum_probs=20.0
Q ss_pred eEEEcCeecCCCceEEeeCCCEEEEc
Q 001076 199 EVEVNGNVHPKDSQVVLRGGDELVFS 224 (1163)
Q Consensus 199 ~v~vNg~~~~k~~~~~L~~gDev~f~ 224 (1163)
.|.|||+.++.. .+|+.||||+|-
T Consensus 61 ~iavN~~~~~~d--~~L~~gDevai~ 84 (88)
T d1vjka_ 61 NIAVNGRYVSWD--EELKDGDVVGVF 84 (88)
T ss_dssp EEEETTBCCCTT--CBCCTTCEEEEE
T ss_pred EEEEcceEcCCC--cCcCCCCEEEEe
Confidence 478999999865 579999999884
No 315
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=43.89 E-value=14 Score=33.82 Aligned_cols=34 Identities=15% Similarity=0.118 Sum_probs=26.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh-----CCcEEEEecc
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA-----GANFINISMS 1018 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL-----g~pfi~Id~s 1018 (1163)
-.|+|.|-.|+||++||+++...+ +.++-.+|..
T Consensus 7 f~i~~tg~~~~gk~~ia~al~~~l~q~~G~R~vtll~~~ 45 (122)
T d1g8fa3 7 FSIVLGNSLTVSREQLSIALLSTFLQFGGGRYYKIFEHN 45 (122)
T ss_dssp EEEEECTTCCSCHHHHHHHHHHHHTTSCSCCCEEECCCT
T ss_pred eEEEEeCCCCCCHHHHHHHHHHHHHHhcCCcceEEecCC
Confidence 358999999999999999997666 3566556543
No 316
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.73 E-value=2.7 Score=39.54 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=24.0
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001076 493 PRILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1163)
Q Consensus 493 ~rILLsgpagsE~Yqe~LaKALA~~f~a~LL 523 (1163)
.-|+|+||+| --.-+|||+||++++.+..
T Consensus 20 ~vI~L~G~pG--SGKTTiAk~La~~l~~~~~ 48 (195)
T d1x6va3 20 CTVWLTGLSG--AGKTTVSMALEEYLVCHGI 48 (195)
T ss_dssp EEEEEESSCH--HHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEECCCC--CCHHHHHHHHHHHHHhcCC
Confidence 3699999999 4678999999999876543
No 317
>d1c06a_ d.66.1.2 (A:) Ribosomal protein S4 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=43.63 E-value=5.4 Score=38.25 Aligned_cols=29 Identities=14% Similarity=0.267 Sum_probs=24.9
Q ss_pred CceEEEcCeecCCCceEEeeCCCEEEEccC
Q 001076 197 KGEVEVNGNVHPKDSQVVLRGGDELVFSPS 226 (1163)
Q Consensus 197 ~G~v~vNg~~~~k~~~~~L~~gDev~f~~~ 226 (1163)
-|.|.|||++|..- .+.++.||+|.+--.
T Consensus 75 Hghi~vNgk~v~iP-Sy~vk~GDvIsvkek 103 (159)
T d1c06a_ 75 HGHILVDGSRVNIP-SYRVKPGQTIAVREK 103 (159)
T ss_dssp TSCEEETTEECCCS-SCCCCSSCEEEECGG
T ss_pred hcceEccceEEEec-ceeecCCcEEeeccc
Confidence 37799999999998 899999999988433
No 318
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=43.22 E-value=20 Score=35.37 Aligned_cols=26 Identities=19% Similarity=0.234 Sum_probs=22.0
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhC
Q 001076 984 CKGILLFGPPGTGKTMLAKAVATEAG 1009 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA~eLg 1009 (1163)
..++.+.|....|||+|+.+|....+
T Consensus 9 ~~~i~viGHVd~GKSTL~~~Ll~~~g 34 (222)
T d1zunb3 9 MLRFLTCGNVDDGKSTLIGRLLHDSK 34 (222)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHHHTT
T ss_pred cceEEEEcCCCCCHHHHHHHHHHHcC
Confidence 34689999999999999999976654
No 319
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=43.06 E-value=14 Score=40.06 Aligned_cols=50 Identities=24% Similarity=0.256 Sum_probs=37.9
Q ss_pred CcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEec
Q 001076 953 ALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1163)
Q Consensus 953 Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eLg~pfi~Id~ 1017 (1163)
-+.++++.|.+.+.. + .+.++|.|-+|++|+.++.++++..+.|++.|..
T Consensus 12 dqp~aI~~l~~~L~~----------g-----~~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~ 61 (408)
T d1c4oa1 12 DQPKAIAGLVEALRD----------G-----ERFVTLLGATGTGKTVTMAKVIEALGRPALVLAP 61 (408)
T ss_dssp THHHHHHHHHHHHHT----------T-----CSEEEEEECTTSCHHHHHHHHHHHHTCCEEEEES
T ss_pred CCHHHHHHHHHHHhc----------C-----CCcEEEecCCCCHHHHHHHHHHHHhCCCEEEEeC
Confidence 344566666666531 1 1358999999999999999999999999887753
No 320
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=42.96 E-value=6.1 Score=41.52 Aligned_cols=37 Identities=27% Similarity=0.418 Sum_probs=31.0
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhc---CCeEEEEeccCCCC
Q 001076 494 RILLSGPAGSEIYQETLAKALAKHF---SARLLIVDSLLLPG 532 (1163)
Q Consensus 494 rILLsgpagsE~Yqe~LaKALA~~f---~a~LLilDs~~~~g 532 (1163)
-|||.||+| .-...|||+||+.+ +.+++-+|.+.+..
T Consensus 55 ~~lf~Gp~G--~GKt~lak~la~~l~~~~~~~~~~~~~~~~~ 94 (315)
T d1qvra3 55 SFLFLGPTG--VGKTELAKTLAATLFDTEEAMIRIDMTEYME 94 (315)
T ss_dssp EEEEBSCSS--SSHHHHHHHHHHHHHSSGGGEEEECTTTCCS
T ss_pred EEEEECCCc--chHHHHHHHHHHHhcCCCcceEEEecccccc
Confidence 489999999 56789999999998 78888899866543
No 321
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=42.24 E-value=7.3 Score=41.61 Aligned_cols=23 Identities=30% Similarity=0.306 Sum_probs=17.9
Q ss_pred eEEEEcCCCChHHH-HHHHHHHHh
Q 001076 986 GILLFGPPGTGKTM-LAKAVATEA 1008 (1163)
Q Consensus 986 gVLL~GPPGTGKT~-LArALA~eL 1008 (1163)
.+|+.+..|||||+ |+..++..+
T Consensus 18 ~~lv~A~AGsGKT~~l~~r~~~ll 41 (485)
T d1w36b1 18 ERLIEASAGTGKTFTIAALYLRLL 41 (485)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CeEEEEcCchHHHHHHHHHHHHHH
Confidence 48999999999998 455566554
No 322
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.90 E-value=4.9 Score=39.37 Aligned_cols=15 Identities=33% Similarity=0.437 Sum_probs=14.0
Q ss_pred ceEEEEcCCCChHHH
Q 001076 985 KGILLFGPPGTGKTM 999 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~ 999 (1163)
+.+++..|+|+|||+
T Consensus 39 ~dvl~~A~TGsGKTl 53 (207)
T d1t6na_ 39 MDVLCQAKSGMGKTA 53 (207)
T ss_dssp CCEEEECCTTSCHHH
T ss_pred CCeEEEecccccccc
Confidence 579999999999997
No 323
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=40.65 E-value=8.3 Score=37.55 Aligned_cols=21 Identities=24% Similarity=0.178 Sum_probs=16.8
Q ss_pred ceEEEEcCCCChHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVA 1005 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA 1005 (1163)
..+++..|+|+|||+.+-..+
T Consensus 43 ~d~iv~a~TGsGKT~~~~l~~ 63 (208)
T d1hv8a1 43 YNIVAQARTGSGKTASFAIPL 63 (208)
T ss_dssp SEEEEECCSSSSHHHHHHHHH
T ss_pred CCeeeechhcccccceeeccc
Confidence 479999999999999655443
No 324
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=40.44 E-value=4.6 Score=42.88 Aligned_cols=18 Identities=44% Similarity=0.702 Sum_probs=15.3
Q ss_pred ceEEEEcCCCChHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAK 1002 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LAr 1002 (1163)
.--||+|.+|||||+|..
T Consensus 15 ~valffGLSGTGKTTLs~ 32 (318)
T d1j3ba1 15 DVAVFFGLSGTGKTTLST 32 (318)
T ss_dssp CEEEEEECTTSCHHHHTC
T ss_pred CEEEEEccCCCCcccccc
Confidence 347999999999999764
No 325
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=40.17 E-value=3.7 Score=39.78 Aligned_cols=15 Identities=33% Similarity=0.430 Sum_probs=14.0
Q ss_pred ceEEEEcCCCChHHH
Q 001076 985 KGILLFGPPGTGKTM 999 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~ 999 (1163)
+.+++..|+|+|||+
T Consensus 39 ~dvii~a~TGSGKTl 53 (209)
T d1q0ua_ 39 ESMVGQSQTGTGKTH 53 (209)
T ss_dssp CCEEEECCSSHHHHH
T ss_pred CCeEeecccccccce
Confidence 579999999999997
No 326
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.14 E-value=17 Score=36.32 Aligned_cols=27 Identities=15% Similarity=0.279 Sum_probs=22.2
Q ss_pred CCCceEEEEcCCCChHHHHHHHHHHHh
Q 001076 982 KPCKGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 982 ~p~kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
++.-+|.+.|..+.|||+|+.+|+..+
T Consensus 4 k~~iNi~iiGHvD~GKsTl~~~ll~~~ 30 (239)
T d1f60a3 4 KSHINVVVIGHVDSGKSTTTGHLIYKC 30 (239)
T ss_dssp CEEEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCccEEEEEeCCCCCHHHHHHHHHHHc
Confidence 344589999999999999999987544
No 327
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=39.71 E-value=16 Score=37.17 Aligned_cols=23 Identities=22% Similarity=0.319 Sum_probs=17.8
Q ss_pred CCceEEEEcCCCChHHHHHHHHH
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVA 1005 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA 1005 (1163)
...|.||.=..|+|||..|-++.
T Consensus 78 ~~~g~iLaDemGlGKT~qaia~l 100 (298)
T d1z3ix2 78 NSYGCIMADEMGLGKTLQCITLI 100 (298)
T ss_dssp TCCEEEECCCTTSCHHHHHHHHH
T ss_pred cCCceEEEeCCCCCHHHHHHHHH
Confidence 34689999999999998655443
No 328
>d1whja_ b.34.10.1 (A:) Restin-like protein 2, Rsnl2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=39.59 E-value=16 Score=32.42 Aligned_cols=61 Identities=25% Similarity=0.269 Sum_probs=33.7
Q ss_pred CCcccccCCceeeeccCCCCcccCCCCCCCCCcccCeeeecccc--CCCCceeeeecCCCCCCCCCC------CCCCCCC
Q 001076 595 KNYTFKKGDRVKFVGNVTSGTTVQPTLRGPGIGFRGRVILPFED--NDFSKIGVRFDRSIPEGNNLG------GFCEDDH 666 (1163)
Q Consensus 595 ~~~~~~~gdrvk~~g~~~~~~~~~~~~~~p~~g~rg~v~~~~e~--n~~~kvgV~Fd~~~~~~~~l~------~~c~~~~ 666 (1163)
....|+-||||..-|. .+|.|.++-.. ..---|||.||.|.++ +|.. =.|...+
T Consensus 21 ~~~~l~vG~rV~v~~~-----------------~~G~VryvG~~~~~~g~~vGVeldep~Gk-ndGt~~G~~YF~C~~~~ 82 (102)
T d1whja_ 21 TSLGLKLGDRVVIAGQ-----------------KVGTLRFCGTTEFASGQWAGIELDEPEGK-NNGSVGRVQYFKCAPKY 82 (102)
T ss_dssp HHHTCCTTCEEEETTT-----------------EEEEEEEEEECSSSCSEEEEEEESSSCCS-BSSEETTEECCCCCTTT
T ss_pred cccCCccCCEEEECCC-----------------CeEEEEEeeecCCCCCcEEEEEECCCCCC-CCCEECCEEEeecCCCc
Confidence 3456788999876321 13444433222 1124699999998653 2221 2566666
Q ss_pred Ccccccc
Q 001076 667 GFFCTAS 673 (1163)
Q Consensus 667 ~ff~~~~ 673 (1163)
+-|++..
T Consensus 83 GiFv~~~ 89 (102)
T d1whja_ 83 GIFAPLS 89 (102)
T ss_dssp EEEEEGG
T ss_pred EEEecHH
Confidence 6555443
No 329
>d2gy9d1 d.66.1.2 (D:2-205) Ribosomal protein S4 {Escherichia coli [TaxId: 562]}
Probab=39.50 E-value=5.2 Score=39.90 Aligned_cols=30 Identities=17% Similarity=0.171 Sum_probs=25.5
Q ss_pred CCceEEEcCeecCCCceEEeeCCCEEEEccC
Q 001076 196 GKGEVEVNGNVHPKDSQVVLRGGDELVFSPS 226 (1163)
Q Consensus 196 ~~G~v~vNg~~~~k~~~~~L~~gDev~f~~~ 226 (1163)
+-|.|.|||++|..- .+.++.||+|.+--.
T Consensus 117 ~Hghi~VNgk~VnIP-Sy~vk~GDvIsvkek 146 (204)
T d2gy9d1 117 SHKAIMVNGRVVNIA-SYQVSPNDVVSIREK 146 (204)
T ss_dssp HTTCEEESSSBCCCT-TCBCCTTCBEEECTT
T ss_pred HhcceecCCEEEEec-cEeecCCCEEEeccc
Confidence 346799999999998 899999999988543
No 330
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=39.15 E-value=11 Score=38.57 Aligned_cols=41 Identities=20% Similarity=0.181 Sum_probs=28.5
Q ss_pred ccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh
Q 001076 951 IGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 951 I~Gleevk~~L~e~V~lpl~~pelf~k~~l~~p~kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
+...+-+++.+..++.. ++.++.-|+|+|||.++-+++..+
T Consensus 112 ~~~rdyQ~~av~~~l~~-----------------~~~il~~pTGsGKT~i~~~i~~~~ 152 (282)
T d1rifa_ 112 IEPHWYQKDAVFEGLVN-----------------RRRILNLPTSAGRSLIQALLARYY 152 (282)
T ss_dssp CCCCHHHHHHHHHHHHH-----------------SEEEECCCTTSCHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHhc-----------------CCceeEEEcccCccHHHHHHHHHh
Confidence 33456667777666642 346777799999999888777544
No 331
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=39.13 E-value=27 Score=34.00 Aligned_cols=58 Identities=14% Similarity=0.182 Sum_probs=34.7
Q ss_pred ccccccccccccchhHHHHHHHhhhhhhcccccccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCC
Q 001076 449 IEVSFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSA 520 (1163)
Q Consensus 449 ~~vsf~~FPYylse~Tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgpagsE~Yqe~LaKALA~~f~a 520 (1163)
-+.||||| +..+.-+.+...|-- +..+..+...-|+|.||+| .-.--|+.|+|+++..
T Consensus 5 ~~~tFdnF--~vg~~N~~a~~~~~~----------~~~~~~~~~n~l~l~G~~G--~GKTHLl~A~~~~~~~ 62 (213)
T d1l8qa2 5 PKYTLENF--IVGEGNRLAYEVVKE----------ALENLGSLYNPIFIYGSVG--TGKTHLLQAAGNEAKK 62 (213)
T ss_dssp TTCCSSSC--CCCTTTHHHHHHHHH----------HHHTTTTSCSSEEEECSSS--SSHHHHHHHHHHHHHH
T ss_pred CCCChhhc--cCCCcHHHHHHHHHH----------HHhCcCCCCCcEEEECCCC--CcHHHHHHHHHHHhcc
Confidence 35689995 666655544333221 1122223233488999998 4677888888887643
No 332
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=38.95 E-value=35 Score=34.94 Aligned_cols=24 Identities=29% Similarity=0.367 Sum_probs=19.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
..++|+|++|+|||+|+..++...
T Consensus 68 Qr~~Ifg~~g~GKt~l~~~~~~~~ 91 (276)
T d1fx0a3 68 QRELIIGDRQTGKTAVATDTILNQ 91 (276)
T ss_dssp CBCBEEESSSSSHHHHHHHHHHTC
T ss_pred ceEeeccCCCCChHHHHHHHHhhh
Confidence 358999999999999987755443
No 333
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.92 E-value=7.2 Score=42.25 Aligned_cols=22 Identities=18% Similarity=0.422 Sum_probs=20.1
Q ss_pred CceEEEEcCCCChHHHHHHHHH
Q 001076 984 CKGILLFGPPGTGKTMLAKAVA 1005 (1163)
Q Consensus 984 ~kgVLL~GPPGTGKT~LArALA 1005 (1163)
+-+|.|.|.||+|||+|..+|.
T Consensus 56 ~l~Iai~G~~n~GKSSLiNaL~ 77 (400)
T d1tq4a_ 56 VLNVAVTGETGSGKSSFINTLR 77 (400)
T ss_dssp CEEEEEEECTTSSHHHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHh
Confidence 3679999999999999999996
No 334
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=38.35 E-value=4.5 Score=43.12 Aligned_cols=17 Identities=24% Similarity=0.581 Sum_probs=14.7
Q ss_pred ceEEEEcCCCChHHHHH
Q 001076 985 KGILLFGPPGTGKTMLA 1001 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LA 1001 (1163)
..|+-||++|+|||+..
T Consensus 81 ~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 81 GTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeEEecccCCCCcceee
Confidence 46999999999999764
No 335
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.32 E-value=7.9 Score=38.46 Aligned_cols=52 Identities=21% Similarity=0.348 Sum_probs=31.8
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCC--CCCCceEEEEcCCCChHHH
Q 001076 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTM 999 (1163)
Q Consensus 945 ~~tfddI~Gleevk~~L~e~V~lpl~~pelf~k~~l--~~p~kgVLL~GPPGTGKT~ 999 (1163)
..+|++++-.+...+.|.+.= +.+|.......+ .-..+.+++..|+|+|||.
T Consensus 16 ~~sF~~l~L~~~l~~~L~~~g---~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTl 69 (222)
T d2j0sa1 16 TPTFDTMGLREDLLRGIYAYG---FEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 69 (222)
T ss_dssp CCSGGGGCCCHHHHHHHHHHT---CCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHH
T ss_pred CCCHHHCCCCHHHHHHHHHCC---CCCCCHHHHHHHHHHHCCCCeEEEcCcchhhhh
Confidence 457888887777777776641 222221111100 0013679999999999997
No 336
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=38.29 E-value=5.9 Score=41.90 Aligned_cols=17 Identities=47% Similarity=0.733 Sum_probs=14.9
Q ss_pred eEEEEcCCCChHHHHHH
Q 001076 986 GILLFGPPGTGKTMLAK 1002 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LAr 1002 (1163)
--||+|-+|||||+|..
T Consensus 16 ~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 16 VAVFFGLSGTGKTTLST 32 (313)
T ss_dssp EEEEECSTTSSHHHHHC
T ss_pred EEEEEccCCCCccccee
Confidence 46999999999999864
No 337
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.19 E-value=3.9 Score=43.05 Aligned_cols=17 Identities=29% Similarity=0.493 Sum_probs=15.2
Q ss_pred ceEEEEcCCCChHHHHH
Q 001076 985 KGILLFGPPGTGKTMLA 1001 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LA 1001 (1163)
..|+-||++|+|||+..
T Consensus 77 ~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 77 GTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred cceeeecccCCCCceec
Confidence 57999999999999965
No 338
>d2hqha1 b.34.10.1 (A:26-97) Dynactin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.06 E-value=16 Score=30.47 Aligned_cols=30 Identities=27% Similarity=0.482 Sum_probs=18.8
Q ss_pred CceeeeecCCCCCCCCCC------CCCCCCCCccccc
Q 001076 642 SKIGVRFDRSIPEGNNLG------GFCEDDHGFFCTA 672 (1163)
Q Consensus 642 ~kvgV~Fd~~~~~~~~l~------~~c~~~~~ff~~~ 672 (1163)
--|||.||.|.++ +|.. =.|...++-|++.
T Consensus 31 ~~vGVeldep~Gk-ndGt~~G~~YF~C~~~~G~Fv~~ 66 (72)
T d2hqha1 31 KWVGVILDEAKGK-NDGTVQGRKYFTCDEGHGIFVRQ 66 (72)
T ss_dssp CEEEEEESSSCSS-BSSEETTEESSCCCTTTEEEECG
T ss_pred cEEEEEEccCCCC-CCCEECCEEEEecCCCcEEEech
Confidence 4689999998654 2222 3566666655443
No 339
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=37.92 E-value=9.5 Score=36.52 Aligned_cols=23 Identities=26% Similarity=0.362 Sum_probs=18.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
+.+|+.-|+|+|||..+......
T Consensus 41 ~~vlv~apTGsGKT~~~~~~~~~ 63 (206)
T d1oywa2 41 RDCLVVMPTGGGKSLCYQIPALL 63 (206)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCCCcchhhhhhhh
Confidence 47999999999999876544433
No 340
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.04 E-value=5.3 Score=38.88 Aligned_cols=15 Identities=47% Similarity=0.581 Sum_probs=13.8
Q ss_pred ceEEEEcCCCChHHH
Q 001076 985 KGILLFGPPGTGKTM 999 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~ 999 (1163)
+.+++.+|+|+|||+
T Consensus 39 ~dvi~~a~tGsGKTl 53 (206)
T d1s2ma1 39 RDILARAKNGTGKTA 53 (206)
T ss_dssp CCEEEECCTTSCHHH
T ss_pred CCEEEecCCcchhhh
Confidence 579999999999996
No 341
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=36.44 E-value=9.3 Score=39.33 Aligned_cols=32 Identities=22% Similarity=0.370 Sum_probs=24.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH-----hCCcEEEEe
Q 001076 985 KGILLFGPPGTGKTMLAKAVATE-----AGANFINIS 1016 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~e-----Lg~pfi~Id 1016 (1163)
..+=|.|-|.+|||+|-.++-.. .++||.+++
T Consensus 11 ~kiGivG~Pn~GKSTlfnalT~~~~~~~anypftTi~ 47 (296)
T d1ni3a1 11 LKTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATID 47 (296)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHSTTTSTTCCSSCCCC
T ss_pred cEEEEECCCCCCHHHHHHHHHCCCCCCcCCCCccCcc
Confidence 34889999999999999998643 256665443
No 342
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=36.34 E-value=13 Score=35.97 Aligned_cols=28 Identities=21% Similarity=0.288 Sum_probs=23.7
Q ss_pred CCCCceeecCCCCchHHHHHHHHHHHhhcC
Q 001076 490 TMCPRILLSGPAGSEIYQETLAKALAKHFS 519 (1163)
Q Consensus 490 ~~s~rILLsgpagsE~Yqe~LaKALA~~f~ 519 (1163)
...+.|||+||+| .-..++||+||+++.
T Consensus 41 ~~~~~lll~GppG--tGKT~l~~~l~~~l~ 68 (276)
T d1fnna2 41 HHYPRATLLGRPG--TGKTVTLRKLWELYK 68 (276)
T ss_dssp SSCCEEEEECCTT--SSHHHHHHHHHHHHT
T ss_pred CCCCceEEECCCC--CCHHHHHHHHHHHHh
Confidence 4567899999999 678899999999874
No 343
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=36.12 E-value=9.3 Score=44.40 Aligned_cols=24 Identities=25% Similarity=0.410 Sum_probs=21.7
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
..|++.|.+|+|||+-++.|.+.+
T Consensus 87 QsIiisGeSGsGKTe~~k~il~yL 110 (684)
T d1lkxa_ 87 QCVIISGESGAGKTEASKKIMQFL 110 (684)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHH
Confidence 579999999999999999887766
No 344
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=35.87 E-value=9.4 Score=44.59 Aligned_cols=24 Identities=33% Similarity=0.451 Sum_probs=21.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
..|++.|.+|+|||.-++.|.+.+
T Consensus 126 QsIiisGeSGaGKTe~~k~il~yL 149 (712)
T d1d0xa2 126 QSLLITGESGAGKTENTKKVIQYL 149 (712)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred ceEEEeCCCCCCHHHHHHHHHHHH
Confidence 589999999999999888887665
No 345
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=35.28 E-value=13 Score=37.32 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=43.4
Q ss_pred ccccccccchhHHHHHHHhhhhhhcccccccccCCCCCCCCceeecCCCC---chHHHHHHHHHHHhhcCCeEEE
Q 001076 453 FESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAG---SEIYQETLAKALAKHFSARLLI 524 (1163)
Q Consensus 453 f~~FPYylse~Tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgpag---sE~Yqe~LaKALA~~f~a~LLi 524 (1163)
-++|||-|.+.-+.++-+..- -+.+..+ -.-||+|..| ||+|-...+.++.+..+|=+|+
T Consensus 49 ~~~lP~~lt~~Q~~~~~~i~~-~~~~~~~-----------~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~ 111 (233)
T d2eyqa3 49 CDSFPFETTPDQAQAINAVLS-DMCQPLA-----------MDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLV 111 (233)
T ss_dssp HHTCCSCCCHHHHHHHHHHHH-HHHSSSC-----------CEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEEC
T ss_pred hhccccccchhHHHHHHHHHH-HHhccCc-----------cCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEc
Confidence 368999999888877643322 2222221 2469999999 9999999999998888775553
No 346
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=34.70 E-value=5.7 Score=41.82 Aligned_cols=17 Identities=29% Similarity=0.532 Sum_probs=14.8
Q ss_pred ceEEEEcCCCChHHHHH
Q 001076 985 KGILLFGPPGTGKTMLA 1001 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LA 1001 (1163)
..|+-||.+|+|||+..
T Consensus 86 ~~i~aYGqTGSGKTyTm 102 (330)
T d1ry6a_ 86 CSCFAYGQTGSGKTYTM 102 (330)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred eEEEeeeccccccceee
Confidence 45999999999999864
No 347
>d1fm0d_ d.15.3.1 (D:) Molybdopterin synthase subunit MoaD {Escherichia coli [TaxId: 562]}
Probab=34.66 E-value=11 Score=31.37 Aligned_cols=24 Identities=33% Similarity=0.372 Sum_probs=19.4
Q ss_pred eEEEcCeecCCCceEEeeCCCEEEEc
Q 001076 199 EVEVNGNVHPKDSQVVLRGGDELVFS 224 (1163)
Q Consensus 199 ~v~vNg~~~~k~~~~~L~~gDev~f~ 224 (1163)
.|-||++.++.. .+|+.||||+|=
T Consensus 52 ~vavn~~~~~~~--~~l~~gdevAi~ 75 (81)
T d1fm0d_ 52 LAAVNQTLVSFD--HPLTDGDEVAFF 75 (81)
T ss_dssp EEEETTEECCTT--CBCCTTCEEEEE
T ss_pred EEecCceecCCC--CCcCCCCEEEEE
Confidence 467899988765 589999999883
No 348
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=33.58 E-value=9.7 Score=36.19 Aligned_cols=36 Identities=36% Similarity=0.519 Sum_probs=29.3
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccCCC
Q 001076 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLLP 531 (1163)
Q Consensus 492 s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~~~ 531 (1163)
.|=|.+.||||| -.-++||.||++||-+- +++-+||
T Consensus 3 ~piI~I~GppGS--GKgT~ak~La~~~gl~~--iStGdLl 38 (225)
T d1ckea_ 3 APVITIDGPSGA--GKGTLCKAMAEALQWHL--LDSGAIY 38 (225)
T ss_dssp SCEEEEECCTTS--SHHHHHHHHHHHHTCEE--EEHHHHH
T ss_pred CCEEEEECCCCC--CHHHHHHHHHHHhCCcE--ECHHHHH
Confidence 467999999994 77899999999998775 5766655
No 349
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=33.48 E-value=7.8 Score=41.11 Aligned_cols=18 Identities=44% Similarity=0.696 Sum_probs=15.4
Q ss_pred ceEEEEcCCCChHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAK 1002 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LAr 1002 (1163)
.--||+|-+|||||+|..
T Consensus 15 d~alfFGLSGTGKTTLs~ 32 (323)
T d1ii2a1 15 DVTVFFGLSGTGKTTLSA 32 (323)
T ss_dssp CEEEEECCTTSSHHHHHC
T ss_pred CEEEEEccCCCCccccee
Confidence 346999999999999973
No 350
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.31 E-value=11 Score=35.70 Aligned_cols=32 Identities=25% Similarity=0.291 Sum_probs=26.4
Q ss_pred CCCCceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001076 490 TMCPRILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1163)
Q Consensus 490 ~~s~rILLsgpagsE~Yqe~LaKALA~~f~a~LL 523 (1163)
+--+.|+|.||+|| -.-++||.||++||...+
T Consensus 6 ~~~~iI~i~GppGS--GKsT~a~~La~~~g~~~i 37 (196)
T d1ukza_ 6 DQVSVIFVLGGPGA--GKGTQCEKLVKDYSFVHL 37 (196)
T ss_dssp TTCEEEEEECSTTS--SHHHHHHHHHHHSSCEEE
T ss_pred CCCcEEEEECCCCC--CHHHHHHHHHHHhCCeEE
Confidence 34578999999994 678999999999987653
No 351
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=33.26 E-value=9.3 Score=39.76 Aligned_cols=23 Identities=30% Similarity=0.368 Sum_probs=19.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001076 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
..++|+|++|+|||+|+..++..
T Consensus 69 Qr~~If~~~g~GKt~ll~~~~~~ 91 (285)
T d2jdia3 69 QRELIIGDRQTGKTSIAIDTIIN 91 (285)
T ss_dssp CBCEEEESTTSSHHHHHHHHHHH
T ss_pred CEEEeecCCCCChHHHHHHHHHh
Confidence 46899999999999998877644
No 352
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=33.22 E-value=12 Score=35.30 Aligned_cols=35 Identities=31% Similarity=0.347 Sum_probs=27.7
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccCC
Q 001076 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1163)
Q Consensus 492 s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~~ 530 (1163)
.-||+|-||||| -.-++||-||++||... +++.++
T Consensus 3 ~~riil~G~pGS--GKsT~a~~La~~~g~~~--i~~gdl 37 (190)
T d1ak2a1 3 GVRAVLLGPPGA--GKGTQAPKLAKNFCVCH--LATGDM 37 (190)
T ss_dssp CCEEEEECCTTS--SHHHHHHHHHHHHTCEE--EEHHHH
T ss_pred ccEEEEECCCCC--CHHHHHHHHHHHhCCeE--EeHHHH
Confidence 468999999994 78899999999998664 555443
No 353
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=32.95 E-value=19 Score=37.73 Aligned_cols=17 Identities=35% Similarity=0.642 Sum_probs=14.7
Q ss_pred ceEEEEcCCCChHHHHH
Q 001076 985 KGILLFGPPGTGKTMLA 1001 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LA 1001 (1163)
..|+-||.+|+|||+..
T Consensus 84 ~~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 84 VCIFAYGQTGSGKTFTM 100 (342)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred cceeeeeccCCcccccc
Confidence 46899999999999854
No 354
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=32.95 E-value=22 Score=35.86 Aligned_cols=26 Identities=27% Similarity=0.443 Sum_probs=21.9
Q ss_pred CCCceEEEEcCCCChHHHHHHHHHHH
Q 001076 982 KPCKGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 982 ~p~kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
.....+++.|-|.+||++|+.+|...
T Consensus 110 ~~~~~v~vvG~PNvGKSsliN~L~~~ 135 (273)
T d1puja_ 110 PRAIRALIIGIPNVGKSTLINRLAKK 135 (273)
T ss_dssp CCCEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CCceEEEEEecCccchhhhhhhhhcc
Confidence 34456999999999999999999753
No 355
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=32.50 E-value=13 Score=43.37 Aligned_cols=24 Identities=38% Similarity=0.408 Sum_probs=21.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
..|++.|.+|+|||+-++.|.+.+
T Consensus 92 Q~IiisGeSGaGKTe~~k~il~yL 115 (710)
T d1br2a2 92 QSILCTGESGAGKTENTKKVIQYL 115 (710)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHH
Confidence 579999999999999888887766
No 356
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=32.45 E-value=8.3 Score=36.43 Aligned_cols=29 Identities=14% Similarity=0.309 Sum_probs=24.9
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001076 493 PRILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1163)
Q Consensus 493 ~rILLsgpagsE~Yqe~LaKALA~~f~a~LL 523 (1163)
.+|+|.||+|| -.-++|+.||++++.+-+
T Consensus 4 m~I~i~GppGs--GKsT~a~~La~~~~~~~i 32 (189)
T d1zaka1 4 LKVMISGAPAS--GKGTQCELIKTKYQLAHI 32 (189)
T ss_dssp CCEEEEESTTS--SHHHHHHHHHHHHCCEEC
T ss_pred eEEEEECCCCC--CHHHHHHHHHHHHCCcEE
Confidence 47999999994 677899999999988854
No 357
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=32.31 E-value=14 Score=33.45 Aligned_cols=28 Identities=21% Similarity=0.387 Sum_probs=23.7
Q ss_pred CCCceeecCCCCchHHHHHHHHHHHhhcCC
Q 001076 491 MCPRILLSGPAGSEIYQETLAKALAKHFSA 520 (1163)
Q Consensus 491 ~s~rILLsgpagsE~Yqe~LaKALA~~f~a 520 (1163)
-.-.|+|.||+| --.-+++|+||+.|+.
T Consensus 4 k~~~I~i~G~~G--sGKTT~~~~La~~l~~ 31 (174)
T d1y63a_ 4 KGINILITGTPG--TGKTSMAEMIAAELDG 31 (174)
T ss_dssp SSCEEEEECSTT--SSHHHHHHHHHHHSTT
T ss_pred CCCEEEEEeCCC--CCHHHHHHHHHHHhCC
Confidence 345699999999 4778999999999975
No 358
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=32.24 E-value=9.8 Score=38.74 Aligned_cols=29 Identities=28% Similarity=0.378 Sum_probs=20.2
Q ss_pred eEEEEcCCCChHHHHHHHHHH----HhCCcEEE
Q 001076 986 GILLFGPPGTGKTMLAKAVAT----EAGANFIN 1014 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~----eLg~pfi~ 1014 (1163)
.+=|.|-|.+|||+|-.++-. ..++||.+
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~~~~~~~ypf~t 36 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKAGIEAANYPFCT 36 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHTC------CCCC
T ss_pred eEEEECCCCCCHHHHHHHHHCCCCccccCCCCC
Confidence 467999999999999998853 23556644
No 359
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=32.03 E-value=11 Score=35.68 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=27.3
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccCC
Q 001076 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1163)
Q Consensus 492 s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~~ 530 (1163)
++-|+|.||||| -.-++||.||+++|... +++.++
T Consensus 8 ~~iI~l~G~pGS--GKsT~a~~La~~~g~~~--is~g~l 42 (194)
T d3adka_ 8 SKIIFVVGGPGS--GKGTQCEKIVQKYGYTH--LSTGDL 42 (194)
T ss_dssp SCEEEEEECTTS--SHHHHHHHHHHHTCCEE--EEHHHH
T ss_pred CcEEEEECCCCC--CHHHHHHHHHHHhCCee--EeccHH
Confidence 356999999995 67899999999998765 455443
No 360
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=31.96 E-value=11 Score=44.54 Aligned_cols=24 Identities=38% Similarity=0.499 Sum_probs=20.8
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
..|++.|.+|+|||.-++.|.+.+
T Consensus 124 QsIiisGeSGaGKTe~~K~il~yL 147 (794)
T d2mysa2 124 QSILITGESGAGKTVNTKRVIQYF 147 (794)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHH
T ss_pred cEEEEEcCCCCCHHHHHHHHHHHH
Confidence 579999999999999888776665
No 361
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=31.82 E-value=12 Score=44.20 Aligned_cols=24 Identities=33% Similarity=0.389 Sum_probs=21.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
..|++.|.+|+|||.-++.|.+.+
T Consensus 122 Q~IiisGESGaGKTe~~K~il~yL 145 (789)
T d1kk8a2 122 QSCLITGESGAGKTENTKKVIMYL 145 (789)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHH
Confidence 589999999999999888877665
No 362
>d2exda1 b.40.12.1 (A:72-143) Hypothetical protein PH0471 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=30.78 E-value=19 Score=29.77 Aligned_cols=46 Identities=24% Similarity=0.228 Sum_probs=35.0
Q ss_pred cceEEEEEecCCceEEEcCeecCCCceEEeeCCCEEEEccC-CCeeE
Q 001076 186 PSGALLEITGGKGEVEVNGNVHPKDSQVVLRGGDELVFSPS-GKHSY 231 (1163)
Q Consensus 186 ~~~a~le~~~~~G~v~vNg~~~~k~~~~~L~~gDev~f~~~-~~~ay 231 (1163)
....++++....|.|.|+|+...--..-+|.-|++|.+..- |.+.+
T Consensus 19 ~~g~v~~~~~~~G~V~v~Ge~W~A~s~~~i~~G~~V~Vv~~~G~~L~ 65 (72)
T d2exda1 19 KVGKVVKIAEDHYLVEVEGDKWIAYSDEKLSLGDRVMVVDVDGLKLK 65 (72)
T ss_dssp CEEEEEECCTTCEEEEETTEEEEECCSSCCCTTCEEEEEEECSSCEE
T ss_pred CEEEEEEecCCCEEEEECCEEEEEEeCCccCCCCEEEEEEeECCEEE
Confidence 33456889999999999999987766778999999977544 44333
No 363
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=30.39 E-value=13 Score=35.59 Aligned_cols=34 Identities=26% Similarity=0.329 Sum_probs=27.2
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccC
Q 001076 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1163)
Q Consensus 492 s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1163)
--||+|-||||| -.-++||.||++||... +|..+
T Consensus 6 ~mrIiliG~PGS--GKtT~a~~La~~~g~~~--is~gd 39 (189)
T d2ak3a1 6 LLRAAIMGAPGS--GKGTVSSRITKHFELKH--LSSGD 39 (189)
T ss_dssp CCEEEEECCTTS--SHHHHHHHHHHHBCCEE--EEHHH
T ss_pred ceeEEEECCCCC--CHHHHHHHHHHHHCCeE--EcHHH
Confidence 358999999994 67899999999999665 45433
No 364
>d1p9ka_ d.66.1.6 (A:) Hypothetical protein YbcJ {Escherichia coli [TaxId: 562]}
Probab=30.27 E-value=5.8 Score=33.56 Aligned_cols=26 Identities=27% Similarity=0.581 Sum_probs=20.2
Q ss_pred CceEEEcCeecCCCceEEeeCCCEEEE
Q 001076 197 KGEVEVNGNVHPKDSQVVLRGGDELVF 223 (1163)
Q Consensus 197 ~G~v~vNg~~~~k~~~~~L~~gDev~f 223 (1163)
.|.|.|||+.+.+... .++.||+|.|
T Consensus 45 ~G~V~VNG~~~~~p~~-~V~~~d~I~v 70 (79)
T d1p9ka_ 45 EGQVKVDGAVETRKRC-KIVAGQTVSF 70 (79)
T ss_dssp HHHHEETTBCCCCSSC-CCCSSEEEEE
T ss_pred hCCcccCCEEeccccc-cCCCCCEEEE
Confidence 4779999999977644 5566899987
No 365
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=30.01 E-value=15 Score=34.34 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=26.0
Q ss_pred CCc-eeecCCCCchHHHHHHHHHHHhhcCC---eEEEEec
Q 001076 492 CPR-ILLSGPAGSEIYQETLAKALAKHFSA---RLLIVDS 527 (1163)
Q Consensus 492 s~r-ILLsgpagsE~Yqe~LaKALA~~f~a---~LLilDs 527 (1163)
||. |+|.|+||| -.-+||++||+++++ +.-+||.
T Consensus 1 ~p~li~l~Glpgs--GKSTla~~L~~~l~~~~~~~~~~~~ 38 (213)
T d1bifa1 1 CPTLIVMVGLPAR--GKTYISKKLTRYLNFIGVPTREFNV 38 (213)
T ss_dssp CCEEEEEECCTTS--SHHHHHHHHHHHHHHTTCCEEEEEH
T ss_pred CCEEEEEECCCCC--CHHHHHHHHHHHHHhcCCCCeEEcc
Confidence 455 899999994 678999999998864 4555554
No 366
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=29.94 E-value=14 Score=43.15 Aligned_cols=24 Identities=33% Similarity=0.429 Sum_probs=21.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
..|++.|.+|+|||+-++.+.+.+
T Consensus 95 Q~IiisGeSGsGKTe~~k~il~~l 118 (730)
T d1w7ja2 95 QSIIVSGESGAGKTVSAKYAMRYF 118 (730)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHH
Confidence 589999999999999888887665
No 367
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.61 E-value=11 Score=34.12 Aligned_cols=25 Identities=24% Similarity=0.526 Sum_probs=20.5
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhc
Q 001076 492 CPRILLSGPAGSEIYQETLAKALAKHF 518 (1163)
Q Consensus 492 s~rILLsgpagsE~Yqe~LaKALA~~f 518 (1163)
++-|+|.|||| .-.-+|++++|+.+
T Consensus 1 ~k~v~ItG~~G--tGKTtl~~~i~~~l 25 (189)
T d2i3ba1 1 ARHVFLTGPPG--VGKTTLIHKASEVL 25 (189)
T ss_dssp CCCEEEESCCS--SCHHHHHHHHHHHH
T ss_pred CcEEEEECCCC--CcHHHHHHHHHHHH
Confidence 35699999999 57778888888776
No 368
>d2uubd1 d.66.1.2 (D:2-209) Ribosomal protein S4 {Thermus thermophilus [TaxId: 274]}
Probab=29.32 E-value=12 Score=37.18 Aligned_cols=30 Identities=27% Similarity=0.410 Sum_probs=25.2
Q ss_pred CCceEEEcCeecCCCceEEeeCCCEEEEccC
Q 001076 196 GKGEVEVNGNVHPKDSQVVLRGGDELVFSPS 226 (1163)
Q Consensus 196 ~~G~v~vNg~~~~k~~~~~L~~gDev~f~~~ 226 (1163)
+-|.|.|||++|..- .+.++.||+|.+--.
T Consensus 121 ~Hg~i~vNg~~v~ip-s~~~~~gd~I~vrek 150 (208)
T d2uubd1 121 RHGHITVNGRRVDLP-SYRVRPGDEIAVAEK 150 (208)
T ss_dssp HTTCEEETTEECCCT-TCBCCTTCEEEECGG
T ss_pred HhcCeecCCeEEEec-cEEecCCceeehhhc
Confidence 346799999999987 889999999988543
No 369
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=29.14 E-value=42 Score=32.20 Aligned_cols=57 Identities=19% Similarity=0.257 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhhcc-CCCeEEEEcchhhhhcCChhhHHHHHHHHhcCCCCEEEEEeccccc
Q 001076 689 AINELFEVALNESK-SSPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQLD 748 (1163)
Q Consensus 689 ~l~~l~evl~~e~k-~~P~IIffddid~~La~~~~~~~~i~s~L~~L~g~VivIgs~~~~d 748 (1163)
++|.+.+.+...+- .+.-|+++||+|. | +.+.-++|.++|++-+++++.|..+++.+
T Consensus 63 ~IR~i~~~~~~~~~~~~~KviIId~ad~-l--~~~aqNaLLK~LEEPp~~t~fiLit~~~~ 120 (198)
T d2gnoa2 63 DIRTIKDFLNYSPELYTRKYVIVHDCER-M--TQQAANAFLKALEEPPEYAVIVLNTRRWH 120 (198)
T ss_dssp HHHHHHHHHTSCCSSSSSEEEEETTGGG-B--CHHHHHHTHHHHHSCCTTEEEEEEESCGG
T ss_pred HHHHHHHHHhhCcccCCCEEEEEeCccc-c--chhhhhHHHHHHhCCCCCceeeeccCChh
Confidence 56677777765443 4556999999999 4 45777789999999999988888877543
No 370
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=28.80 E-value=6.1 Score=41.84 Aligned_cols=17 Identities=41% Similarity=0.657 Sum_probs=14.7
Q ss_pred ceEEEEcCCCChHHHHH
Q 001076 985 KGILLFGPPGTGKTMLA 1001 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LA 1001 (1163)
..|+-||.+|+|||+..
T Consensus 82 ~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 82 CTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp EEEEEEECTTSSHHHHH
T ss_pred ceEEeeeeccccceEEe
Confidence 46999999999999754
No 371
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=28.63 E-value=16 Score=35.81 Aligned_cols=22 Identities=27% Similarity=0.403 Sum_probs=19.8
Q ss_pred EEEEcCCCChHHHHHHHHHHHh
Q 001076 987 ILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eL 1008 (1163)
|-+.|.+++|||+|+.+|....
T Consensus 8 IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 8 VSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHHHhhc
Confidence 8889999999999999997654
No 372
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.05 E-value=14 Score=34.60 Aligned_cols=32 Identities=34% Similarity=0.475 Sum_probs=26.5
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEE
Q 001076 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIV 525 (1163)
Q Consensus 492 s~rILLsgpagsE~Yqe~LaKALA~~f~a~LLil 525 (1163)
|=||+|-||+|| -.-++||.||++||..-+-.
T Consensus 2 ~mrIvl~G~pGS--GKtT~a~~La~~~g~~~i~~ 33 (180)
T d1akya1 2 SIRMVLIGPPGA--GKGTQAPNLQERFHAAHLAT 33 (180)
T ss_dssp CCEEEEECCTTS--SHHHHHHHHHHHHCCEEEEH
T ss_pred ceEEEEECCCCC--CHHHHHHHHHHHhCCceEec
Confidence 348999999994 78999999999998775544
No 373
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=27.55 E-value=5.7 Score=42.54 Aligned_cols=17 Identities=29% Similarity=0.528 Sum_probs=14.7
Q ss_pred ceEEEEcCCCChHHHHH
Q 001076 985 KGILLFGPPGTGKTMLA 1001 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LA 1001 (1163)
..|+-||.+|+|||+..
T Consensus 115 ~tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 115 ATCFAYGQTGSGKTHTM 131 (362)
T ss_dssp EEEEEEESTTSSHHHHH
T ss_pred ceEEeeccCCCCCceee
Confidence 46899999999999864
No 374
>d1y9qa2 b.82.1.15 (A:83-181) Probable transcriptional regulator VC1968, C-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=27.37 E-value=35 Score=28.97 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=30.4
Q ss_pred EEEEEecCCceEEEcCeecCCCceEEeeCCCEEEEccCCCeeE
Q 001076 189 ALLEITGGKGEVEVNGNVHPKDSQVVLRGGDELVFSPSGKHSY 231 (1163)
Q Consensus 189 a~le~~~~~G~v~vNg~~~~k~~~~~L~~gDev~f~~~~~~ay 231 (1163)
-++=+.++.+.|.+||+ .++|+.||-+.|-....|+|
T Consensus 46 E~~~Vl~G~~~~~~~~~------~~~l~~GD~~~~~~~~~H~~ 82 (99)
T d1y9qa2 46 EYIHVLEGIMKVFFDEQ------WHELQQGEHIRFFSDQPHGY 82 (99)
T ss_dssp EEEEEEESCEEEEETTE------EEEECTTCEEEEECSSSEEE
T ss_pred EEEEEEcCceEEEecce------EEEecCCCEEEECCCCeEEE
Confidence 44556677888888875 88999999999998888888
No 375
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=27.35 E-value=14 Score=35.25 Aligned_cols=34 Identities=32% Similarity=0.439 Sum_probs=27.5
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccCCC
Q 001076 494 RILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLLP 531 (1163)
Q Consensus 494 rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~~~ 531 (1163)
.|-+.|||| --.-++||.||++||.+ -+|+-++|
T Consensus 5 ~IaIdGp~G--sGKgT~ak~La~~lg~~--~istGdl~ 38 (223)
T d1q3ta_ 5 QIAIDGPAS--SGKSTVAKIIAKDFGFT--YLDTGAMY 38 (223)
T ss_dssp EEEEECSSC--SSHHHHHHHHHHHHCCE--EEEHHHHH
T ss_pred EEEEECCCC--CCHHHHHHHHHHHhCCc--EECHHHHH
Confidence 477889999 47789999999999877 55776655
No 376
>d1h3fa2 d.66.1.4 (A:352-432) Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=27.06 E-value=28 Score=29.12 Aligned_cols=32 Identities=6% Similarity=0.097 Sum_probs=22.2
Q ss_pred ceEEEcCeecCCCceEEeeCCCEEEEccCCCee
Q 001076 198 GEVEVNGNVHPKDSQVVLRGGDELVFSPSGKHS 230 (1163)
Q Consensus 198 G~v~vNg~~~~k~~~~~L~~gDev~f~~~~~~a 230 (1163)
|-|+|||+++.-- ...|..||++++..-.++-
T Consensus 43 g~V~iN~~ki~d~-~~~l~~~~~~il~~GKK~~ 74 (81)
T d1h3fa2 43 RGLRLDGEVLTDP-MLQVDLSRPRILQRGKDRF 74 (81)
T ss_dssp TCEEETTEECCCT-TCEEECSSCEEEEETTTEE
T ss_pred CCEEECCEEecCc-cceecCCCeEEEEecCccE
Confidence 4579999999643 4567788888775544433
No 377
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=27.05 E-value=13 Score=39.44 Aligned_cols=17 Identities=35% Similarity=0.640 Sum_probs=14.9
Q ss_pred ceEEEEcCCCChHHHHH
Q 001076 985 KGILLFGPPGTGKTMLA 1001 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LA 1001 (1163)
..|+-||++|+|||+..
T Consensus 76 ~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 76 VCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeeeccccCCCCccccc
Confidence 46999999999999963
No 378
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=26.71 E-value=15 Score=34.32 Aligned_cols=29 Identities=21% Similarity=0.345 Sum_probs=24.6
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEEE
Q 001076 494 RILLSGPAGSEIYQETLAKALAKHFSARLLI 524 (1163)
Q Consensus 494 rILLsgpagsE~Yqe~LaKALA~~f~a~LLi 524 (1163)
+|+|.||+|| -.-++|+-||++|+...+-
T Consensus 2 ~I~i~G~pGS--GKsT~a~~La~~~g~~~is 30 (182)
T d1s3ga1 2 NIVLMGLPGA--GKGTQADRIVEKYGTPHIS 30 (182)
T ss_dssp EEEEECSTTS--SHHHHHHHHHHHHCCCEEE
T ss_pred EEEEECCCCC--CHHHHHHHHHHHHCCceee
Confidence 6999999994 6788999999999887553
No 379
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=26.65 E-value=18 Score=35.41 Aligned_cols=27 Identities=22% Similarity=0.474 Sum_probs=22.4
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHhC
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATEAG 1009 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~eLg 1009 (1163)
|.-+|.+.|.-+.|||+|+.+|....|
T Consensus 2 p~iNi~viGHVd~GKTTL~~~Ll~~~g 28 (224)
T d1jnya3 2 PHLNLIVIGHVDHGKSTLVGRLLMDRG 28 (224)
T ss_dssp CEEEEEEEESTTSSHHHHHHHHHHHHB
T ss_pred CccEEEEEecCCCCHHHHHHHHHHHcC
Confidence 445789999999999999999865554
No 380
>d2ogqa2 d.223.1.2 (A:507-593) Serine/threonine-protein kinase plk C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.57 E-value=36 Score=28.97 Aligned_cols=31 Identities=13% Similarity=0.337 Sum_probs=23.4
Q ss_pred CCceEEEcCeecCCCceEEeeC-CCEEEEccCCC
Q 001076 196 GKGEVEVNGNVHPKDSQVVLRG-GDELVFSPSGK 228 (1163)
Q Consensus 196 ~~G~v~vNg~~~~k~~~~~L~~-gDev~f~~~~~ 228 (1163)
+||+|+|| .+.-+++++|.+ |+-|.+.-..+
T Consensus 20 SngtvQVN--fF~DhtKiil~~~~~~vtyid~~~ 51 (87)
T d2ogqa2 20 SNGSVQIN--FFQDHTKLILCPLMAAVTYIDEKR 51 (87)
T ss_dssp TTSCEEEE--ETTTCCEEEEETTTTEEEEECTTC
T ss_pred cCCcEEEE--EeCCCcEEEEcCCCCEEEEEecCC
Confidence 68899998 565677888887 67777766655
No 381
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=26.54 E-value=8.3 Score=35.84 Aligned_cols=44 Identities=18% Similarity=0.154 Sum_probs=32.4
Q ss_pred CCCCCCCCcee-ecCCCCchHHHHHHHHHHHhhcCCe---EEEEeccCCC
Q 001076 486 SDLPTMCPRIL-LSGPAGSEIYQETLAKALAKHFSAR---LLIVDSLLLP 531 (1163)
Q Consensus 486 ~~l~~~s~rIL-LsgpagsE~Yqe~LaKALA~~f~a~---LLilDs~~~~ 531 (1163)
..+.+..|.|. ++||+|| -.-+|||+|+++|+.. ..+++.-..+
T Consensus 15 ~~~~~~~~~iIgI~G~~GS--GKSTla~~L~~~l~~~~~~~~~~~~~~~~ 62 (198)
T d1rz3a_ 15 LAIKTAGRLVLGIDGLSRS--GKTTLANQLSQTLREQGISVCVFHMDDHI 62 (198)
T ss_dssp HTSCCSSSEEEEEEECTTS--SHHHHHHHHHHHHHHTTCCEEEEEGGGGC
T ss_pred HhccCCCCEEEEEECCCCC--CHHHHHHHHHHHhccccccceeccccccc
Confidence 45777888765 9999996 7889999999988764 4444443344
No 382
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=26.42 E-value=2.2e+02 Score=26.25 Aligned_cols=115 Identities=18% Similarity=0.219 Sum_probs=61.9
Q ss_pred EEEEcCCCChHHHHHHHHHHHh---CCcEEEEeccc-----------------cc-----cccccch----HHHHHHHHH
Q 001076 987 ILLFGPPGTGKTMLAKAVATEA---GANFINISMSS-----------------IT-----SKWFGEG----EKYVKAVFS 1037 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eL---g~pfi~Id~se-----------------L~-----s~~~Ge~----E~~Ir~lF~ 1037 (1163)
|.+|=-.|=|||+-|--+|-++ |..++.+..-. +. ..|.... .......+.
T Consensus 5 i~vytG~GKGKTTAAlG~alRA~G~G~rV~ivQFlKg~~~~ge~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~ 84 (157)
T d1g5ta_ 5 IIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWETQNREADTAACMAVWQ 84 (157)
T ss_dssp EEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGGTCEEEECCTTCCCCGGGHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcHHHHHHHHHHHhcCCCEEEEEEEecCCcccchhhhhcccCcEEEEecCCCcccCCChHHHHHHHHHHHH
Confidence 5666668999999888776554 55554443200 00 0011111 123445566
Q ss_pred HHhc----cCCeEEEEccccccccCCCCcchHHHHHHHHHHHHHHhcCCcccCCCCEEEEEEeCCCCCCCHHHHhccCcE
Q 001076 1038 LASK----IAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRR 1113 (1163)
Q Consensus 1038 ~A~k----~~PsILfIDEID~L~g~r~s~~~~eal~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~aLlrRFd~v 1113 (1163)
.|++ ....+|++|||-..+....-+ ..+++..++. .+..+=||.|.+. .++.++.+-|.+
T Consensus 85 ~a~~~~~~~~~dllILDEi~~Ai~~gli~---------~~~v~~ll~~----rp~~~evVlTGr~---~p~~L~e~ADlV 148 (157)
T d1g5ta_ 85 HGKRMLADPLLDMVVLDELTYMVAYDYLP---------LEEVISALNA----RPGHQTVIITGRG---CHRDILDLADTV 148 (157)
T ss_dssp HHHHHTTCTTCSEEEEETHHHHHHTTSSC---------HHHHHHHHHT----SCTTCEEEEECSS---CCHHHHHHCSEE
T ss_pred HHHHHhhcCccCEEeHHHHHHHHHcCCCC---------HHHHHHHHHh----CCCCCEEEEECCC---CCHHHHHhccee
Confidence 5554 246799999997654222110 1223333332 2355677888754 346777777766
Q ss_pred EEec
Q 001076 1114 LMVN 1117 (1163)
Q Consensus 1114 I~I~ 1117 (1163)
-++.
T Consensus 149 TEm~ 152 (157)
T d1g5ta_ 149 SELR 152 (157)
T ss_dssp EECC
T ss_pred eeee
Confidence 5553
No 383
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=25.60 E-value=15 Score=34.19 Aligned_cols=28 Identities=21% Similarity=0.317 Sum_probs=23.7
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001076 494 RILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1163)
Q Consensus 494 rILLsgpagsE~Yqe~LaKALA~~f~a~LL 523 (1163)
||+|.||+|| -.-++||.||++++..-+
T Consensus 2 ~I~i~G~pGS--GKsT~~~~La~~~~~~~i 29 (179)
T d1e4va1 2 RIILLGAPVA--GKGTQAQFIMEKYGIPQI 29 (179)
T ss_dssp EEEEEESTTS--SHHHHHHHHHHHHCCCEE
T ss_pred EEEEECCCCC--CHHHHHHHHHHHhCCcee
Confidence 6999999994 678999999999986543
No 384
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=25.59 E-value=16 Score=33.99 Aligned_cols=28 Identities=36% Similarity=0.523 Sum_probs=24.1
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001076 494 RILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1163)
Q Consensus 494 rILLsgpagsE~Yqe~LaKALA~~f~a~LL 523 (1163)
+|+|-||+|| -.-++||.||++||-..+
T Consensus 2 ~I~i~G~pGs--GKsT~a~~La~~~g~~~i 29 (181)
T d2cdna1 2 RVLLLGPPGA--GKGTQAVKLAEKLGIPQI 29 (181)
T ss_dssp EEEEECCTTS--SHHHHHHHHHHHHTCCEE
T ss_pred EEEEECCCCC--CHHHHHHHHHHHHCCceE
Confidence 6999999994 678999999999987644
No 385
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=25.57 E-value=21 Score=34.50 Aligned_cols=25 Identities=28% Similarity=0.352 Sum_probs=21.6
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHH
Q 001076 983 PCKGILLFGPPGTGKTMLAKAVATE 1007 (1163)
Q Consensus 983 p~kgVLL~GPPGTGKT~LArALA~e 1007 (1163)
|.-+|-+.|....|||+|+.+|...
T Consensus 2 p~ini~iiGHvd~GKSTL~~~l~~~ 26 (196)
T d1d2ea3 2 PHVNVGTIGHVDHGKTTLTAAITKI 26 (196)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCcHHHHHHHHHHH
Confidence 4467899999999999999999764
No 386
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=24.87 E-value=16 Score=37.58 Aligned_cols=30 Identities=30% Similarity=0.413 Sum_probs=17.1
Q ss_pred EEEEcCCCChHHHHHHHHH----HHhCCcEEEEe
Q 001076 987 ILLFGPPGTGKTMLAKAVA----TEAGANFINIS 1016 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA----~eLg~pfi~Id 1016 (1163)
|=|.|-|.+|||+|-.++- +..++||.+++
T Consensus 3 v~lvG~pn~GKStlfn~lt~~~~~v~nypftT~~ 36 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIE 36 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC--------------
T ss_pred EeEECCCCCCHHHHHHHHHCCCCchhcCCCCccc
Confidence 5689999999999999983 33367766554
No 387
>d1xo3a_ d.15.3.3 (A:) C9orf74 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.74 E-value=12 Score=32.57 Aligned_cols=28 Identities=18% Similarity=0.210 Sum_probs=21.7
Q ss_pred eEEEcCeec--CCCceEEeeCCCEEEEccC
Q 001076 199 EVEVNGNVH--PKDSQVVLRGGDELVFSPS 226 (1163)
Q Consensus 199 ~v~vNg~~~--~k~~~~~L~~gDev~f~~~ 226 (1163)
-|+|||.-+ ..|-..+|+.||||.|-.+
T Consensus 68 ~v~vN~~di~~l~gl~t~l~dgDeV~~~p~ 97 (101)
T d1xo3a_ 68 LVLINDADWELLGELDYQLQDQDSILFIST 97 (101)
T ss_dssp EEEETTEEHHHHTTTSCCCCTTCEEEEEET
T ss_pred EEEEcCcceeccCCCccCcCCCCEEEEeCC
Confidence 478999865 4566789999999988443
No 388
>d1ixda_ b.34.10.1 (A:) Cylindromatosis tumour-suppressor Cyld {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.08 E-value=88 Score=27.45 Aligned_cols=32 Identities=13% Similarity=0.169 Sum_probs=19.2
Q ss_pred ceeeeecCCCCCCCCCC------CCCCCCCCccccccc
Q 001076 643 KIGVRFDRSIPEGNNLG------GFCEDDHGFFCTASS 674 (1163)
Q Consensus 643 kvgV~Fd~~~~~~~~l~------~~c~~~~~ff~~~~~ 674 (1163)
-|||.||.+....+|.. =.|...++.|++...
T Consensus 49 ~~GVeldd~~~G~ndGt~~G~rYF~C~~~~G~Fv~~~~ 86 (104)
T d1ixda_ 49 LAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKS 86 (104)
T ss_dssp EEEEEESSCCTTCBSSEETTEECSCCCTTCBEEEEGGG
T ss_pred EEEEEeCCCCCCCcCCEECCEEEEecCCCcEEEechHH
Confidence 58999976543323332 457777776655543
No 389
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=23.82 E-value=1.8e+02 Score=24.84 Aligned_cols=21 Identities=10% Similarity=0.101 Sum_probs=13.9
Q ss_pred EEecCCCHHHHHHHHHHHHhh
Q 001076 1114 LMVNLPDAPNREKIIRVILAK 1134 (1163)
Q Consensus 1114 I~I~~Pd~eeR~eILk~ll~k 1134 (1163)
+...+.+.++-.+.++.++++
T Consensus 101 ~l~KP~~~~~L~~~i~~~l~r 121 (123)
T d1mb3a_ 101 YISKPISVVHFLETIKRLLER 121 (123)
T ss_dssp EECSSCCHHHHHHHHHHHHSC
T ss_pred EEECCCCHHHHHHHHHHHHhC
Confidence 334455777777777877754
No 390
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=23.37 E-value=17 Score=38.59 Aligned_cols=17 Identities=35% Similarity=0.599 Sum_probs=14.7
Q ss_pred ceEEEEcCCCChHHHHH
Q 001076 985 KGILLFGPPGTGKTMLA 1001 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LA 1001 (1163)
..|+-||++|+|||+..
T Consensus 126 ~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 126 ICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeEEeeccCCCccceEe
Confidence 46999999999999863
No 391
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=23.05 E-value=40 Score=31.46 Aligned_cols=58 Identities=14% Similarity=0.287 Sum_probs=39.0
Q ss_pred CceEEEEcCCCC-hHHHHHHHHHHHh-CCcEEEEeccccccccccchHHHHHHHHHHHhccCCeEEEEcccc
Q 001076 984 CKGILLFGPPGT-GKTMLAKAVATEA-GANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVD 1053 (1163)
Q Consensus 984 ~kgVLL~GPPGT-GKT~LArALA~eL-g~pfi~Id~seL~s~~~Ge~E~~Ir~lF~~A~k~~PsILfIDEID 1053 (1163)
|+.|.+.|-+|+ |+++| ..|.+.. .+.++-+.+.. .+..+.+.+++..|..+++.+-+
T Consensus 2 pK~I~IlGsTGSIG~~tL-~Vi~~~~d~f~v~~lsa~~-----------N~~~L~~q~~ef~Pk~v~i~d~~ 61 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTL-DLIERNLDRYQVIALTANR-----------NVKDLADAAKRTNAKRAVIADPS 61 (150)
T ss_dssp CEEEEEETTTSHHHHHHH-HHHHHTGGGEEEEEEEESS-----------CHHHHHHHHHHTTCSEEEESCGG
T ss_pred CcEEEEECCCcHHHHHHH-HHHHcCCCCcEEEEEEeCC-----------CHHHHHHHHHhhccccceeccHH
Confidence 488999999997 77765 2333222 45555554422 45677888899999888886543
No 392
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.62 E-value=18 Score=33.88 Aligned_cols=33 Identities=9% Similarity=0.127 Sum_probs=26.0
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEEEeccC
Q 001076 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1163)
Q Consensus 493 ~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1163)
+.|+|-||||| -.-++||.||++||.. .+++.+
T Consensus 2 ~iI~i~GppGS--GKsT~a~~La~~~g~~--~i~~g~ 34 (194)
T d1teva_ 2 LVVFVLGGPGA--GKGTQCARIVEKYGYT--HLSAGE 34 (194)
T ss_dssp EEEEEECCTTS--SHHHHHHHHHHHHCCE--EEEHHH
T ss_pred cEEEEECCCCC--CHHHHHHHHHHHhCCc--eEcHHH
Confidence 46999999994 6789999999999864 455533
No 393
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=22.33 E-value=21 Score=34.45 Aligned_cols=31 Identities=32% Similarity=0.445 Sum_probs=23.9
Q ss_pred EEEEcCCCChHHHHHHHHHHHhCCcEEEEecc
Q 001076 987 ILLFGPPGTGKTMLAKAVATEAGANFINISMS 1018 (1163)
Q Consensus 987 VLL~GPPGTGKT~LArALA~eLg~pfi~Id~s 1018 (1163)
+|+.|+..+||+..|..++... -+++++-..
T Consensus 2 iLVtGGarSGKS~~AE~l~~~~-~~~~YiAT~ 32 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIGDA-PQVLYIATS 32 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHCSC-SSEEEEECC
T ss_pred EEEECCCCccHHHHHHHHHhcC-CCcEEEEcc
Confidence 6999999999999999987543 455555443
No 394
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.60 E-value=23 Score=33.40 Aligned_cols=32 Identities=28% Similarity=0.414 Sum_probs=25.5
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEEEe
Q 001076 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1163)
Q Consensus 493 ~rILLsgpagsE~Yqe~LaKALA~~f~a~LLilD 526 (1163)
+=|.|+||+|+ -.-+|+|.|++.|.-.+-+.-
T Consensus 2 rpIvl~GpsG~--GK~tl~~~L~~~~~~~~~~~~ 33 (186)
T d1gkya_ 2 RPIVISGPSGT--GKSTLLKKLFAEYPDSFGFSV 33 (186)
T ss_dssp CCEEEECCTTS--SHHHHHHHHHHHCTTTEEECC
T ss_pred CeEEEECCCCC--CHHHHHHHHHHhCCcceeEEE
Confidence 44999999995 788899999999976654443
No 395
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=21.27 E-value=29 Score=33.18 Aligned_cols=26 Identities=31% Similarity=0.413 Sum_probs=22.3
Q ss_pred CCCCceEEEEcCCCChHHHHHHHHHH
Q 001076 981 TKPCKGILLFGPPGTGKTMLAKAVAT 1006 (1163)
Q Consensus 981 ~~p~kgVLL~GPPGTGKT~LArALA~ 1006 (1163)
.+|.-+|.+.|....|||+|+.+|..
T Consensus 5 ~~p~ini~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 5 VQPEVNIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp CCCCEEEEEECSTTSSHHHHHHHHHS
T ss_pred CCCCeEEEEEEccCCcHHHHHHHHHh
Confidence 35666899999999999999999964
No 396
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.23 E-value=22 Score=37.56 Aligned_cols=24 Identities=17% Similarity=0.353 Sum_probs=21.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001076 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1163)
Q Consensus 985 kgVLL~GPPGTGKT~LArALA~eL 1008 (1163)
++|-+.|..|.|||+|+.++....
T Consensus 18 RNI~iiGhvd~GKTTL~d~Ll~~~ 41 (341)
T d1n0ua2 18 RNMSVIAHVDHGKSTLTDSLVQRA 41 (341)
T ss_dssp EEEEEECCGGGTHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCcHHHHHHHHHHHC
Confidence 579999999999999999997554
No 397
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=20.92 E-value=21 Score=33.40 Aligned_cols=29 Identities=21% Similarity=0.269 Sum_probs=24.1
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001076 493 PRILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1163)
Q Consensus 493 ~rILLsgpagsE~Yqe~LaKALA~~f~a~LL 523 (1163)
+.|+|.||+|| -.-++|+.||+++|...+
T Consensus 7 ~iI~i~G~pGS--GKsT~a~~La~~~g~~~i 35 (194)
T d1qf9a_ 7 NVVFVLGGPGS--GKGTQCANIVRDFGWVHL 35 (194)
T ss_dssp EEEEEEESTTS--SHHHHHHHHHHHHCCEEE
T ss_pred cEEEEECCCCC--CHHHHHHHHHHHHCCceE
Confidence 35899999994 577899999999997654
No 398
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=20.38 E-value=1.2e+02 Score=24.00 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=30.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEEeccc
Q 001076 986 GILLFGPPGTGKTMLAKAVATEAGANFINISMSS 1019 (1163)
Q Consensus 986 gVLL~GPPGTGKT~LArALA~eLg~pfi~Id~se 1019 (1163)
.|.+|+-+|++.-..|+.+....|++|..++...
T Consensus 2 ki~iYs~~~C~~C~~ak~~L~~~~i~y~~~~i~~ 35 (76)
T d1h75a_ 2 RITIYTRNDCVQCHATKRAMENRGFDFEMINVDR 35 (76)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred EEEEEeCCCCccHHHHHHHHHhcCceeEEEeecC
Confidence 3789999999999999999999999999998643
No 399
>d1g2914 b.40.6.3 (1:302-372) Maltose transport protein MalK, C-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=20.16 E-value=58 Score=25.77 Aligned_cols=55 Identities=22% Similarity=0.106 Sum_probs=35.7
Q ss_pred cceEEEEeecCCc-ceEEEEEecCCceEEEcCeecCCCceEEeeCCCEEEEccCCCeeEEeee
Q 001076 174 NLCRLRRIENGGP-SGALLEITGGKGEVEVNGNVHPKDSQVVLRGGDELVFSPSGKHSYIFQQ 235 (1163)
Q Consensus 174 ~~c~l~~~~~~g~-~~a~le~~~~~G~v~vNg~~~~k~~~~~L~~gDev~f~~~~~~ayifq~ 235 (1163)
..+++..+|.=|. ..++++.-+..=+|. +. ....++.||.|.|....++.|+|-.
T Consensus 9 i~~~V~~vE~lG~et~v~~~~~~~~i~~~-----~~--~~~~~~~G~~v~l~~~~~~~hlFD~ 64 (71)
T d1g2914 9 VRAVVEIVENLGSERIVRLRVGGVTFVGS-----FR--SESRVREGVEVDVVFDMKKIHIFDK 64 (71)
T ss_dssp EEEEEEEEEECSSCEEEEEEETTEEEEEE-----EC--TTCCCCTTCEEEEEECGGGCEEEET
T ss_pred EEEEEEEEEcccCeEEEEEEECCEEEEEE-----EC--CCCCCCCCCEEEEEECcccEEEEcc
Confidence 4567777765443 355565533322222 22 2455789999999999999999974
Done!