Your job contains 1 sequence.
>001086
MEVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGI
VIPSSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKKNAVTVLQDL
LTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCPPLQENQTAKRKRKVSIHDE
LDHQECCTNTDHVRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATPLSQK
PPLRKKRAQQIVSLLKQRRLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSV
ISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVK
MKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIH
VALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILR
QVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLAR
SSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFESDAEDIG
SVDDNSDDDDTCSNRDDSECNSENQRQRRPKYLNCCKSENNMLTVYMEIDESHRGDVWLS
GLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRMEDPTKAIAESVPSVRHYGSGAKIKRA
LPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLDSFSLISKSCGKEKSSSVKDAKATEVS
TDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALL
SVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPV
SDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLNAVK
HGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRGKGDHLVS
KHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADF
VSAINEGWLYQWNVQIADTVMGEIIAFFPTMPQTSSALALWLVKLDAIIAPYLERVNSGK
EDARMRCRGIFLFPQRPFI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001086
(1159 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2032505 - symbol:HB-1 "homeobox-1" species:370... 313 9.6e-71 6
TAIR|locus:2167628 - symbol:RLT2 "RINGLET 2" species:3702... 305 2.4e-64 7
>TAIR|locus:2032505 [details] [associations]
symbol:HB-1 "homeobox-1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 EMBL:CP002684 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010228
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 IPI:IPI00539857
RefSeq:NP_174164.2 UniGene:At.27788 PRIDE:F4HY56
EnsemblPlants:AT1G28420.1 GeneID:839740 KEGG:ath:AT1G28420
OMA:ESHLRIM Uniprot:F4HY56
Length = 1705
Score = 313 (115.2 bits), Expect = 9.6e-71, Sum P(6) = 9.6e-71
Identities = 83/235 (35%), Positives = 119/235 (50%)
Query: 264 LQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMXXXXXXXXXXXX 323
LQ + + K KQ + E+ K E A I++E +D I
Sbjct: 443 LQRENERAEKKKQKDEIRREKDAIRRKLAIEKATARRIAKESMDLIEDEQLELMELAAIS 502
Query: 324 XXGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKV 383
P+ DH + + L + RD L+ FPP S+++K PF PW S ETV L V
Sbjct: 503 KGLPSVLQL-DHDTLQNLE---VYRDSLSTFPPKSLQLKMPFAISPWKDSDETVGNLLMV 558
Query: 384 FHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMEL-----GRG 438
+ FL +++ ++D+ FTLDEF QAFHD DS LLG+IHV LL+ ++ DVE G G
Sbjct: 559 WRFLISFSDVLDLWPFTLDEFIQAFHDYDSRLLGEIHVTLLRSIIRDVEDVARTPFSGIG 618
Query: 439 CPPHLSVSCK--FLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSK 491
+ + + + ++ F + W K LNPLTW EILRQ+ ++AGFG K
Sbjct: 619 NNQYTTANPEGGHPQIVEGAYAWGFDIRSWKKHLNPLTWPEILRQLALSAGFGPK 673
Score = 268 (99.4 bits), Expect = 9.6e-71, Sum P(6) = 9.6e-71
Identities = 120/437 (27%), Positives = 197/437 (45%)
Query: 735 AGDFHGVRETNTSRELHPLDSFSLISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSD 794
+ D H +++ R L D+ ++ ++ ++S S + + +++P +S+ LG D
Sbjct: 1052 SNDLH---KSSAERALINQDA-NISQENYASKRSRSQLKSYIGHKAEEVYPYRSLPLGQD 1107
Query: 795 RRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLI 854
RR+NRYW F ++ DP R+ F DG W +ID+EEA L++ LD RG +E+ L
Sbjct: 1108 RRHNRYWHFAVSVSKSDPC-SRLLFVELHDGKWLLIDSEEAFDILVASLDMRGIRESHLR 1166
Query: 855 ESLEKRE-AFLCQAMSS-GLVNNTEIRHVAQSDQSELDLVREXXXXXXXXXXNNLALSEI 912
L+K E +F A L N + + + S D V A+S
Sbjct: 1167 IMLQKIEGSFKENACKDIKLARNPFLTEKSVVNHSPTDSVSPSSS----------AISGS 1216
Query: 913 GKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLN--AVKHGKRSYLDAL 970
+S+ + +I +D+G+ E + R +F W+W Y +L A K+GK+ + L
Sbjct: 1217 NSDSMETSTSIRVDLGRNDTENKNLSKRFHDFQRWMWTETYSSLPSCARKYGKKRS-ELL 1275
Query: 971 ARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRGKGDHLVSKHKILSSQLQ 1030
A C+ C Y + C CH ++ D E A L ++L L
Sbjct: 1276 ATCDACVASYLSEYTFCSSCHQRLDV-VDSSEILDSGLAV-----SPLPFGVRLLKPLLV 1329
Query: 1031 SLKAAV--HAIESVMPEDALVGAW-----TKSAHKLWVKRLRRTSSLAELLQVVADFVSA 1083
L+A+V A+ES ED W T S+ ++ L S + + ++F+SA
Sbjct: 1330 FLEASVPDEALESFWTEDQRK-KWGFRLNTSSSPGELLQVLTSLESAIKKESLSSNFMSA 1388
Query: 1084 INEGWLYQWNVQIADTVMGEIIAFFPTMPQTSSALALWLVKLDA-IIAPYLERVNSGKED 1142
+ L N + D +++ P +P+T SA+AL L +LDA II E+ ED
Sbjct: 1389 --KELLGAANAEADDQGSVDVL---PWIPKTVSAVALRLSELDASIIYVKPEKPEVIPED 1443
Query: 1143 ARMRCRGIFLFPQ-RPF 1158
+ I LFP+ PF
Sbjct: 1444 ENEQ---ISLFPRDSPF 1457
Score = 136 (52.9 bits), Expect = 9.6e-71, Sum P(6) = 9.6e-71
Identities = 26/54 (48%), Positives = 40/54 (74%)
Query: 649 IDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MEDPTKA 700
IDES++G W+ GL EG+Y L+++E+LNALV L+ + + G+SIR +ED +A
Sbjct: 927 IDESNQGQSWIQGLTEGDYCHLSVEERLNALVALVGIANEGNSIRTGLEDRMEA 980
Score = 133 (51.9 bits), Expect = 9.6e-71, Sum P(6) = 9.6e-71
Identities = 33/87 (37%), Positives = 46/87 (52%)
Query: 6 KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
KTP Q + L K YSEEKYP+++ L+ LDL+ +Q++ WF +R +DK D P
Sbjct: 46 KTPFQLETLEKVYSEEKYPSEATRAELSEKLDLSDRQLQMWFCHRRLKDKKDGQSNKPVK 105
Query: 66 SSKKLKGFHGRNRLGVVSAKIVKKQDS 92
SS N L + V +QDS
Sbjct: 106 SSVAAVQSASVNELPAAAGS-VPEQDS 131
Score = 99 (39.9 bits), Expect = 9.6e-71, Sum P(6) = 9.6e-71
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 509 KYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVEXXXXXXXXXXX 568
++ L PGT+K F +L +G+ G V +LA Q + L +T++ E
Sbjct: 725 RHRLTPGTVKFAAFHVLSLEGSKGLTVLELADKIQKSGLRDLTTSKTPEASISVALTRDV 784
Query: 569 XXFEKIASSTYRLRINTSKEADDFES 594
FE+IA STY +R K+ D E+
Sbjct: 785 KLFERIAPSTYCVRAPYVKDPKDGEA 810
Score = 66 (28.3 bits), Expect = 9.6e-71, Sum P(6) = 9.6e-71
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 127 LKKVFRKDGPPLGVEFDSLPSQAF 150
L + R DGP LG+EFD LP AF
Sbjct: 192 LGEPLRDDGPILGMEFDPLPPGAF 215
Score = 46 (21.3 bits), Expect = 2.7e-37, Sum P(6) = 2.7e-37
Identities = 26/121 (21%), Positives = 48/121 (39%)
Query: 345 SLCRD--LLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLD 402
+L RD L + P++ ++ P+ P D K+ F + G D+ D
Sbjct: 779 ALTRDVKLFERIAPSTYCVRAPYVKDPKDGEAILADARKKIRAFENGFTGPEDVNDLERD 838
Query: 403 EFAQAFHDKDSML--LGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQE 460
E + D+D + L + A +L + + G+G ++ C A + S +E
Sbjct: 839 EDFEIDIDEDPEVDDLATLASASKSAVLGEANVLSGKGVD---TMFCDVKADVKSELEKE 895
Query: 461 F 461
F
Sbjct: 896 F 896
Score = 42 (19.8 bits), Expect = 1.1e-42, Sum P(6) = 1.1e-42
Identities = 11/45 (24%), Positives = 26/45 (57%)
Query: 264 LQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQ 308
L+ +RK + + ++++ ER R+ +E+ L + + +ERL +
Sbjct: 388 LEIQRKKNEERMRKEMERNERERRKEEER--LMRERIKEEERLQR 430
Score = 39 (18.8 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 1097 ADTVMGEIIAFFPTMPQTSSALALWLVKLDAIIAPY 1132
+D +G ++ + + S L LW LD I +
Sbjct: 548 SDETVGNLLMVWRFLISFSDVLDLWPFTLDEFIQAF 583
Score = 38 (18.4 bits), Expect = 5.1e-31, Sum P(4) = 5.1e-31
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 256 KQRRLANNLQSKRKPVAKGKQVK----LDKGERLRQPNKEKCELAPDSVISQERLD 307
K++++ NN SK V +Q+K L+ E++ K E A + +S E+LD
Sbjct: 24 KKKKIDNNSSSKDGRVKPKRQMKTPFQLETLEKVYSEEKYPSE-ATRAELS-EKLD 77
Score = 37 (18.1 bits), Expect = 3.6e-42, Sum P(6) = 3.6e-42
Identities = 10/51 (19%), Positives = 27/51 (52%)
Query: 244 RKKRAQQIVSLLKQRRLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCE 294
RKK +++ ++ + N + +RK + + ++ + ERL++ + + E
Sbjct: 392 RKKNEERM-----RKEMERNERERRKEEERLMRERIKEEERLQREQRREVE 437
>TAIR|locus:2167628 [details] [associations]
symbol:RLT2 "RINGLET 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 EMBL:AB005239 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0010228 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00536771 RefSeq:NP_199231.1 UniGene:At.24988
ProteinModelPortal:Q9FFH1 SMR:Q9FFH1 PRIDE:Q9FFH1
EnsemblPlants:AT5G44180.1 GeneID:834441 KEGG:ath:AT5G44180
TAIR:At5g44180 HOGENOM:HOG000241585 InParanoid:Q9FFH1 OMA:AFHDYDP
PhylomeDB:Q9FFH1 ProtClustDB:CLSN2715588 ArrayExpress:Q9FFH1
Genevestigator:Q9FFH1 Uniprot:Q9FFH1
Length = 1694
Score = 305 (112.4 bits), Expect = 2.4e-64, Sum P(7) = 2.4e-64
Identities = 66/149 (44%), Positives = 89/149 (59%)
Query: 348 RDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQA 407
RD A FPP SVK+K+PF +PW+ S E V L V+ FL T+A ++ + FTLDEFAQA
Sbjct: 488 RDKQAIFPPTSVKLKKPFAVKPWNGSDENVANLLMVWRFLITFADVLGLWPFTLDEFAQA 547
Query: 408 FHDKDSMLLGKIHVALLKLLLSDVE---MELGRGCPPHLSVSCK-FLALLHSVENQE--- 460
FHD D L+G+IH+ LLK ++ D+E L G + +V+ H VE
Sbjct: 548 FHDYDPRLMGEIHIVLLKTIIKDIEGVVRTLSTGVGANQNVAANPGGGHPHVVEGAYAWG 607
Query: 461 FFVEFWNKSLNPLTWTEILRQVLVAAGFG 489
F + W K+LN TW EILRQ+ ++AG G
Sbjct: 608 FDIRSWRKNLNVFTWPEILRQLALSAGLG 636
Score = 170 (64.9 bits), Expect = 2.4e-64, Sum P(7) = 2.4e-64
Identities = 40/107 (37%), Positives = 60/107 (56%)
Query: 782 DLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLS 841
+L+ +S+ LG DRR NRYW F + DPG R++ E +DG W +ID+EEA L+
Sbjct: 1067 ELYVYRSLPLGQDRRRNRYWRFSASASRNDPGCGRIFVEL-QDGRWRLIDSEEAFDYLVK 1125
Query: 842 VLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSE 888
LD RG +E+ L L K EA +A+ + N + ++ S S+
Sbjct: 1126 SLDVRGVRESHLHFMLLKIEASFKEALRRNVAANPGVCSISSSLDSD 1172
Score = 141 (54.7 bits), Expect = 2.4e-64, Sum P(7) = 2.4e-64
Identities = 53/229 (23%), Positives = 104/229 (45%)
Query: 933 EQHRMWSRLQEFDAWIW-NSFYLN-LNAVKHGKRSYLDALARCERCHDLYWRDEKHCKIC 990
E+ + R F+ W+W N + + L+A K+G + C C +L++ + C C
Sbjct: 1191 ERCSVLQRFHSFEKWMWDNMLHPSALSAFKYGAKQSSPLFRICRICAELHFVGDICCPSC 1250
Query: 991 ---HTTFEL-DFDLEERYAVHAATCRGKGDH-LVSKHKILSS-QLQSLKAAVHAIESVMP 1044
H ++ + E+ A R +GD + + ILS +++ LK + +E+ +P
Sbjct: 1251 GQMHAGPDVGELCFAEQVAQLGDNLR-RGDTGFILRSSILSPLRIRLLKVQLALVEASLP 1309
Query: 1045 EDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMG-- 1102
+ L WT++ K W +L +SS +L QV+ +A+ +L N + ++G
Sbjct: 1310 PEGLEAFWTENLRKSWGMKLLSSSSHEDLYQVLTTLEAALKRDFLSS-NFETTSELLGLQ 1368
Query: 1103 ------EI---IAFFPTMPQTSSALALWLVKLDAIIAPYLERVNSGKED 1142
++ + P +P+T+ +AL L D+ I ++ N +D
Sbjct: 1369 EGALASDLTCGVNVLPWIPKTAGGVALRLFDFDSSIVYTPDQNNDPLKD 1417
Score = 127 (49.8 bits), Expect = 2.4e-64, Sum P(7) = 2.4e-64
Identities = 23/45 (51%), Positives = 36/45 (80%)
Query: 650 DESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRM 694
DES G+ W+ GL+EG+YS+L+ +E+LNALV LI + + G++IR+
Sbjct: 894 DESKLGEQWVQGLVEGDYSNLSSEERLNALVALIGIATEGNTIRI 938
Score = 107 (42.7 bits), Expect = 2.4e-64, Sum P(7) = 2.4e-64
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 509 KYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVEXXXXXXXXXXX 568
++ L PGT+K F +L +G G + ++A Q + L +T+ E
Sbjct: 690 RHRLTPGTVKFAAFHVLSLEGEKGLNILEVAEKIQKSGLRDLTTSRTPEASVAAALSRDT 749
Query: 569 XXFEKIASSTYRLRINTSKEADDFES 594
FE++A STY +R + K+A D E+
Sbjct: 750 KLFERVAPSTYCVRASYRKDAGDAET 775
Score = 105 (42.0 bits), Expect = 2.4e-64, Sum P(7) = 2.4e-64
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 4 KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
K KT Q + L YS E YP+++ L+ L+L+ +Q++ WF +R +++
Sbjct: 22 KMKTAAQLEVLENTYSAEPYPSEAIRADLSVKLNLSDRQLQMWFCHRRLKERKST----- 76
Query: 64 SSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKKNAVTVLQ----- 118
+ S ++ K + V D + N+ S G+G + VTV++
Sbjct: 77 TPSKRQRKELVTPTAMESWEPP-VNAGDLVAGNELDSRRAARGSGG--SGVTVVRRFNEP 133
Query: 119 ---DLLTSDYI---LKKVFRKDGPPLGVEFDSLPSQAF 150
++ Y+ L + R +GP LG+EFD LP AF
Sbjct: 134 SSAEVRAIGYVEAQLGERLRDNGPVLGMEFDPLPPGAF 171
Score = 42 (19.8 bits), Expect = 4.1e-42, Sum P(7) = 4.1e-42
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 845 DRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDL 891
D G E + E+ E+ AF SG+ + ++ + + SE D+
Sbjct: 769 DAGDAETIFAEARERIRAF-----KSGITDVEDVDDAERDEDSESDV 810
Score = 41 (19.5 bits), Expect = 2.4e-64, Sum P(7) = 2.4e-64
Identities = 15/72 (20%), Positives = 37/72 (51%)
Query: 237 LSQKPPLRKKRAQQIVSLLKQRRLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELA 296
L ++ LR+KR +QI ++++ + +R K ++ + E++R+ + + L
Sbjct: 350 LEKQDMLRRKREEQIRKEMERQDRERRKEEERLLREKQREEERYLKEQMRELQRREKFLK 409
Query: 297 PDSVISQERLDQ 308
++ I E++ Q
Sbjct: 410 KET-IRAEKMRQ 420
Score = 40 (19.1 bits), Expect = 7.8e-64, Sum P(8) = 7.8e-64
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 163 LQENQTAKRKRKVSIHDELDHQE 185
L++ +RKR+ I E++ Q+
Sbjct: 350 LEKQDMLRRKREEQIRKEMERQD 372
Score = 37 (18.1 bits), Expect = 7.8e-64, Sum P(8) = 7.8e-64
Identities = 8/46 (17%), Positives = 23/46 (50%)
Query: 234 ATPLSQKPPLRKKRAQQIVSLLKQRRLANNLQSKRKPVAKGKQVKL 279
A + QK +RK++ + +R +A + + + + ++++L
Sbjct: 415 AEKMRQKEEMRKEKEVARLKAANERAIARKIAKESMELIEDERLEL 460
Score = 37 (18.1 bits), Expect = 1.3e-41, Sum P(7) = 1.3e-41
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 824 DGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKR 860
+G + + +EE L AL++++ + I +LE+R
Sbjct: 908 EGDYSNLSSEERLNALVALIGIATEGNTIRI-ALEER 943
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1159 1101 0.00088 123 3 11 22 0.40 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 636 (68 KB)
Total size of DFA: 533 KB (2243 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 94.26u 0.14s 94.40t Elapsed: 00:00:04
Total cpu time: 94.26u 0.14s 94.40t Elapsed: 00:00:04
Start: Fri May 10 05:50:18 2013 End: Fri May 10 05:50:22 2013