BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001086
         (1159 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224131970|ref|XP_002321223.1| predicted protein [Populus trichocarpa]
 gi|222861996|gb|EEE99538.1| predicted protein [Populus trichocarpa]
          Length = 1152

 Score = 1466 bits (3796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 750/1154 (64%), Positives = 891/1154 (77%), Gaps = 22/1154 (1%)

Query: 3    VKRKTPLQAKALLKFYS-EEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
            +KRK+PLQ +ALLKFY+ E+KYP++  ME LA   +LT+KQVR WFIEKRR +K  N ++
Sbjct: 1    MKRKSPLQLQALLKFYAAEDKYPSQRAMEDLAVVSNLTFKQVRGWFIEKRRSEKSKNELI 60

Query: 62   IPSSSSKKLKGFHGRNRLGVVS-AKIVKKQDSLIHN-------------KHLSLMVCNGT 107
             P   +KKL  F GR    V S A+ + KQ  L  +             KH    V    
Sbjct: 61   EPPRLTKKLSVFKGRKGAAVASDARKMLKQLELSASSTDKSNKPSSSKYKHAPSEVQGRI 120

Query: 108  GKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCPPLQENQ 167
            GK+K  + ++QDLLTSDYIL K+FRKDGPPLG+EFDS P++AF   +D  NS P  QENQ
Sbjct: 121  GKRKKKLVLVQDLLTSDYILGKIFRKDGPPLGLEFDSPPTRAFHGCEDFRNSHPAHQENQ 180

Query: 168  TAKRKRKVSIHDELDHQECCTNTDHVRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQV 227
             A ++ KVS+    D Q C   +  V+KHGMGKGLMT WRV NP+GG  PTGI     Q+
Sbjct: 181  RANKRGKVSMCAAFDDQNC-NESAPVKKHGMGKGLMTVWRVTNPDGGDFPTGIHCGGSQI 239

Query: 228  TVVPQMATPLSQKPPL-RKKRAQQIVSLLKQRRLANNLQSKRKPVAKGKQVKLDKGERLR 286
            TV PQ++TP+ +K PL +KKR   + SL+KQR L   LQ KRKP  K ++V+  + E  +
Sbjct: 240  TVTPQISTPVPRKQPLQKKKRRPPVSSLVKQRMLQKELQEKRKPSVKRREVESKRDEIQK 299

Query: 287  QPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSL 346
            Q  +EKCELA + +++QERL+Q AMLVDDEELELREL  GPNP TC +H +   L GCSL
Sbjct: 300  QSFREKCELALERLMNQERLNQFAMLVDDEELELRELRAGPNPLTCTEHFAANRLFGCSL 359

Query: 347  CRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQ 406
            C+DLL KFPPNSVK+KQPF  QPWDSSPE VKKLFKVFHFL TY+  VDIC FTLDE AQ
Sbjct: 360  CKDLLVKFPPNSVKLKQPFAMQPWDSSPEAVKKLFKVFHFLYTYSVTVDICPFTLDELAQ 419

Query: 407  AFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFW 466
            AFHDKDS LLGKIHVALLKLLLSDVE E+  G  PHLS+SCKFLALLHSVE+QEF VEFW
Sbjct: 420  AFHDKDSFLLGKIHVALLKLLLSDVETEISSGLLPHLSISCKFLALLHSVEDQEFVVEFW 479

Query: 467  NKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILL 526
              SLNPLTWTEIL QVL+AAGFGSKQG  R+E LSKEM LM+KYGL PGTLKGELF++L 
Sbjct: 480  KNSLNPLTWTEILCQVLIAAGFGSKQGGFRREVLSKEMSLMVKYGLHPGTLKGELFQLLS 539

Query: 527  EQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINT- 585
             QGNNG KV  LA+SSQI ELNL  TT+E+ELLI STLSSDITLFEKI+SST+RLRINT 
Sbjct: 540  VQGNNGLKVSDLAKSSQIVELNLAGTTDELELLICSTLSSDITLFEKISSSTFRLRINTL 599

Query: 586  SKEADDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSENQRQRRPKYLNCCKSENNMLTV 645
            +KEA  F+SD ED G V ++  D+   S+  +S+C+SEN   R  K ++  K +N MLT 
Sbjct: 600  AKEASGFQSDTEDSGIVHEDFHDNGA-SSSSNSDCDSENSSPRNLKLIDYPKRKNKMLTF 658

Query: 646  YMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRMEDPTKAIAESV 705
              EIDES  G+VWL GLMEGEYSDL+I+EKLN LV LIDLVSAGSSIR+ED  K   ESV
Sbjct: 659  ENEIDESRPGEVWLLGLMEGEYSDLSIEEKLNGLVALIDLVSAGSSIRLEDLAKPTVESV 718

Query: 706  PSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLDSFSLISKSCGK 765
            P++ H+ SGAKIKR+   + ++PRPSWVHAG  +  +E  TS +  P+DS  L SK  GK
Sbjct: 719  PNIYHHCSGAKIKRSSSTKDNVPRPSWVHAGQINVTKEAYTSSKFFPVDSSVLFSKFDGK 778

Query: 766  EK-SSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSED 824
            +K S   K+ +   +  +LHPMQSI+LGSDRRYNRYWLFLGPCN YDPGHKRVYFESSED
Sbjct: 779  DKLSGKEKETEGMGLEINLHPMQSIFLGSDRRYNRYWLFLGPCNSYDPGHKRVYFESSED 838

Query: 825  GHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQS 884
            GHWEVIDTEEALRALLSVLDDRGR+EALLIESLEKRE FLCQ MSS +VN++ + +  QS
Sbjct: 839  GHWEVIDTEEALRALLSVLDDRGRREALLIESLEKRETFLCQEMSSKMVNDSGVGYFTQS 898

Query: 885  DQSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEF 944
            DQSEL+ VREDSSSPVSDVDNNL L++I  +SLP   AIVL+ GKKG+E+++ W+RL++F
Sbjct: 899  DQSELETVREDSSSPVSDVDNNLTLTDIANDSLPPMSAIVLETGKKGKEENQKWNRLRQF 958

Query: 945  DAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERY 1004
            D WIWN FY +LNAVK  KRSYL++L RCE CHDLYWRDEKHCKICHTTFELDFDLEERY
Sbjct: 959  DTWIWNCFYCDLNAVKRSKRSYLESLRRCETCHDLYWRDEKHCKICHTTFELDFDLEERY 1018

Query: 1005 AVHAATCRGKGDHLV-SKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKR 1063
            A+H+ATCR K D+++  KHK+LSS+LQSLKAAV+AIE+VMPEDALVGAWTKSAH+LWV+R
Sbjct: 1019 AIHSATCRQKEDNVMCPKHKVLSSKLQSLKAAVYAIETVMPEDALVGAWTKSAHRLWVRR 1078

Query: 1064 LRRTSSLAELLQVVADFVSAINEGWLYQWNV-QIADTVMGEIIAFFPTMPQTSSALALWL 1122
            LRRTSSLAELLQVVADFV+AINE WL Q N+ Q + T M EII  FPTMPQTSSALALWL
Sbjct: 1079 LRRTSSLAELLQVVADFVAAINEDWLCQCNLAQGSSTYMEEIITCFPTMPQTSSALALWL 1138

Query: 1123 VKLDAIIAPYLERV 1136
            +KLD +I+PYLE++
Sbjct: 1139 MKLDELISPYLEKI 1152


>gi|255567182|ref|XP_002524572.1| hypothetical protein RCOM_1211540 [Ricinus communis]
 gi|223536125|gb|EEF37780.1| hypothetical protein RCOM_1211540 [Ricinus communis]
          Length = 1120

 Score = 1424 bits (3685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 735/1157 (63%), Positives = 867/1157 (74%), Gaps = 57/1157 (4%)

Query: 1    MEVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGI 60
            ME+KRK+PLQ +AL KFY+E+KYP++  ME LA  LDLT+KQV+ WFIE+RRRDK  +  
Sbjct: 1    MEMKRKSPLQLQALEKFYAEQKYPSQMVMEELAGVLDLTFKQVQGWFIERRRRDKSKD-- 58

Query: 61   VIPSSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKKNAVTVLQDL 120
             IP S +K+     GRN LGV +A               + M+     KKK  +   QDL
Sbjct: 59   -IPPSLNKEHSVIKGRNCLGVAAA---------------TRMISKTKRKKKKLIPS-QDL 101

Query: 121  LTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCPPLQENQTAKRKRKVSIHDE 180
            LT DY+L K+FRKDGPPLGVEFDSLPS+AF  S DS NS    QENQ A RKRKVS  D 
Sbjct: 102  LTPDYVLCKIFRKDGPPLGVEFDSLPSKAFLNSIDSRNSNLASQENQRANRKRKVSKQDT 161

Query: 181  LDHQECCTNTDHVRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATPLSQK 240
               Q+   N+D   KHG+GKGLMT WR  NP  G  P  I  + +++  VPQ+ TP  +K
Sbjct: 162  STCQDY-NNSDPAMKHGIGKGLMTVWRATNPTAGHFPPRIPFSQKEI--VPQVPTPTPRK 218

Query: 241  PPLRKKRAQQIVSLLKQRRLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSV 300
               RKK+ QQ+VS++KQ+RL N    KRKP  K + V+  + E  + P KE+CELA + V
Sbjct: 219  SLCRKKK-QQLVSIMKQKRLENKTHHKRKPSVKQRVVESQRDEFQKLPLKERCELALEGV 277

Query: 301  ISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVK 360
            ISQER++Q AML DDEELELREL+ GPNP +C D+ +   L+GCSLC+DLL KFPPN VK
Sbjct: 278  ISQERINQFAMLADDEELELRELQAGPNPLSCSDNCAINKLYGCSLCKDLLPKFPPNCVK 337

Query: 361  MKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIH 420
            MKQPF  QPWDSS +TVKKLFK                             DS+LLGKIH
Sbjct: 338  MKQPFAKQPWDSSADTVKKLFK-----------------------------DSLLLGKIH 368

Query: 421  VALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILR 480
            VALLKLLLSDVE E+     PH SVSCKFLALLHSVE+QEF +EFW KSLNPLTW EIL 
Sbjct: 369  VALLKLLLSDVETEISSRYLPHSSVSCKFLALLHSVEDQEFLMEFWKKSLNPLTWIEILH 428

Query: 481  QVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLAR 540
            Q+LVAAGFGS+QG+ RKESLSKEM LM+KYGLR GTLKGELF +L E+GNNG K+ +LA+
Sbjct: 429  QILVAAGFGSRQGAFRKESLSKEMNLMMKYGLRVGTLKGELFTLLSERGNNGLKIPELAK 488

Query: 541  SSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINT-SKEADDFESDAEDI 599
            S QIAELNL +TTEE+ELLISSTLSSDITLFEKI+ S YRLRI+T SKEADDF+SD ED 
Sbjct: 489  SLQIAELNLTNTTEELELLISSTLSSDITLFEKISPSAYRLRISTLSKEADDFQSDTEDS 548

Query: 600  GSVDDNSDDDDTCSNRDDSECNSENQRQRRPKYLNCCKSENNMLTVYMEIDESHRGDVWL 659
            GSV D+ +D  TCS+  DSEC  EN   R+ K  N  K++++MLTVY EIDESH G+VWL
Sbjct: 549  GSVHDDFNDSGTCSS-SDSECELENPNSRKSKRSNSHKNKSHMLTVYNEIDESHPGEVWL 607

Query: 660  SGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRMEDPTKAIAESVPSVRHYGSGAKIKR 719
             GL+EGEY+DL I+EKLNALV LIDL+SAGSSIRMED T+   ESVP+  HYGSGAKIKR
Sbjct: 608  LGLVEGEYADLCIEEKLNALVALIDLLSAGSSIRMEDSTRPTTESVPNTLHYGSGAKIKR 667

Query: 720  ALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLDSFSLISKSCGKEKSSSV-KDAKATE 778
            +   QH+LPRPSW+H G  +   E +TS    P+DS   I K   +EKSSS   D + TE
Sbjct: 668  SSSKQHNLPRPSWIHVGQINNATELHTSSTSRPIDSSVSILKFNEREKSSSKGNDTQETE 727

Query: 779  VSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRA 838
            +  +LHPMQSI+LGSDRRYNRYWLFLGPCN +DPGHKRVYFESSEDGHWEVIDT EALRA
Sbjct: 728  LGVNLHPMQSIFLGSDRRYNRYWLFLGPCNSHDPGHKRVYFESSEDGHWEVIDTAEALRA 787

Query: 839  LLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSS 898
            LLSVLDDRG +EALLIESLEKRE FLC  MSS + N++E RH+   D SEL++VREDS+S
Sbjct: 788  LLSVLDDRGTREALLIESLEKREGFLCLEMSSSIANDSENRHLTLPDHSELEIVREDSTS 847

Query: 899  PVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLNA 958
            PVSDVDNNL+L+E+  +S P CGAI+L  GKK E++++ W RLQEFDAWIWN FY +LN+
Sbjct: 848  PVSDVDNNLSLNEVTNDSSPLCGAIILAAGKKEEDENQKWCRLQEFDAWIWNYFYCDLNS 907

Query: 959  VKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRGKGDH- 1017
            VK  KRSY ++LARCE CHDLYWRDEKHC+ CHTTFELDFDLEERYA+H+ATCR KGDH 
Sbjct: 908  VKRSKRSYFESLARCETCHDLYWRDEKHCRFCHTTFELDFDLEERYAIHSATCRHKGDHE 967

Query: 1018 LVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVV 1077
            ++ KHK+LSSQLQ+LKAAVHAIES MPEDAL GAWTKSAH+LWVKRLRRTSS+AELLQVV
Sbjct: 968  MLRKHKVLSSQLQALKAAVHAIESAMPEDALRGAWTKSAHRLWVKRLRRTSSVAELLQVV 1027

Query: 1078 ADFVSAINEGWLYQWNVQIADTVMGEIIAFFPTMPQTSSALALWLVKLDAIIAPYLERVN 1137
            ADFV+AINE WL Q + Q ++  + EIIA FPTMPQTSSALALWLVKLD +I PYLERV 
Sbjct: 1028 ADFVAAINENWLCQNSAQDSNNYLEEIIACFPTMPQTSSALALWLVKLDDLICPYLERVQ 1087

Query: 1138 -SGKEDARMRCRGIFLF 1153
                +  R +C GI L 
Sbjct: 1088 CENNQGTRTKCTGILLL 1104


>gi|359494654|ref|XP_002263797.2| PREDICTED: uncharacterized protein LOC100241125 [Vitis vinifera]
          Length = 1154

 Score = 1320 bits (3416), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 698/1143 (61%), Positives = 855/1143 (74%), Gaps = 29/1143 (2%)

Query: 19   SEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSSKKLKGFHGRNR 78
            +E+ YPT+  M+  AAAL LTYKQVR WF E+RR++K +NG+ +  SSSKKL     +N 
Sbjct: 6    AEDNYPTQRVMKDYAAALGLTYKQVRGWFFERRRKEKNENGMGV--SSSKKL--VRAKNG 61

Query: 79   LGVVSAKIVKKQDSL------------IHNK------HLSLMVCNGTGKKKNAVTVLQDL 120
            +GVV+AK + ++  L             +N+      H      + +   +    + +DL
Sbjct: 62   IGVVAAKKIIRRVGLAAHCRGNMSSSSTYNRACLGAHHWHCFRNHDSRAVERGKILNEDL 121

Query: 121  LTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCPPLQENQTAKRKRKVSIHDE 180
             T+DYILKKVFRKDGPPLGVEFDSLPS +F    DS NS    QENQT+ ++RKV +  +
Sbjct: 122  STTDYILKKVFRKDGPPLGVEFDSLPSSSFCHCTDSRNSHRTCQENQTSSKRRKVVVVSK 181

Query: 181  --LDHQECCTNTDHVRK-HGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATPL 237
              + HQ+ C N     K HG+GKGLMT WR  NP  G  PTGID AD QV  V   +T +
Sbjct: 182  PAVLHQQFCNNKSAPAKIHGIGKGLMTVWRATNPGAGDFPTGIDFADGQVAAVSPTSTSI 241

Query: 238  SQKPPLRKKRAQQIVSLLKQRRLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAP 297
             +K  ++KK+ ++  S+ K + +   L  K+KP  K  +V+ +K    ++PNKEKCELA 
Sbjct: 242  LRKSLIKKKKPRKQSSVTKWKSVGGKLNDKKKPSRKRGKVECNKDVNQKKPNKEKCELAL 301

Query: 298  DSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPN 357
            +   SQE LDQ AML+DDEELEL+E + GPNP TC  H +T GLHGCSLC+DLLAKFPPN
Sbjct: 302  EEGKSQEHLDQFAMLMDDEELELQESQAGPNPVTCSAHFATNGLHGCSLCKDLLAKFPPN 361

Query: 358  SVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLG 417
            +VKMKQPF  QPWDSSPE VKK+FKV HFL TY+ +VD+C FTLDEFAQAFHD+DS+LLG
Sbjct: 362  AVKMKQPFCMQPWDSSPELVKKMFKVLHFLYTYSVVVDVCPFTLDEFAQAFHDEDSLLLG 421

Query: 418  KIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLNPLTWTE 477
            K+H+ALL LLLSDVE EL  G  PH+  +CKFL LL SV   EF ++FW +SLNPLTWTE
Sbjct: 422  KVHLALLNLLLSDVETELSSGFLPHVIKNCKFLGLLQSVGQNEFVLKFWKRSLNPLTWTE 481

Query: 478  ILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQGNNGSKVCQ 537
            ILRQVLVAAGFGS++G+ R+E+L KE+  M+KYGLRPGTLKGELF IL  QGNNG KV  
Sbjct: 482  ILRQVLVAAGFGSRKGTLRREALDKELNPMVKYGLRPGTLKGELFSILSNQGNNGMKVPD 541

Query: 538  LARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINT-SKEADDFESDA 596
            LAR  QI+ELNL  TT+E+ELLI STLSSDITL+EKI+SS+YRLRI + + EA++F+SD 
Sbjct: 542  LARCVQISELNLAGTTDELELLIYSTLSSDITLYEKISSSSYRLRITSHTNEAENFQSDT 601

Query: 597  EDIGSVDDNSDDDDTCSNRDDSECNSENQRQRRPKYLNCCKSENNMLTVYMEIDESHRGD 656
            +D GS+DD+S D    S+ DDS+ +S      +  Y+N  K  N MLT+Y EIDES+ G+
Sbjct: 602  DDSGSIDDDSKDSRKYSSSDDSDSDSGTSNLGKLNYMNHHKQRNGMLTIYTEIDESNPGE 661

Query: 657  VWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRMEDPTKAIAESVPSVRHYGSGAK 716
            VWL GLMEGEYSDL+I+EKLNAL+ L+DLVS GSSIRMED TKA+ E VP++ HYGSGAK
Sbjct: 662  VWLLGLMEGEYSDLSIEEKLNALMALVDLVSGGSSIRMEDLTKAVVEYVPNIHHYGSGAK 721

Query: 717  IKRALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLDSFSLISKSCGKEK-SSSVKDAK 775
            IKR+   QH+LP P+  H G   G +E N S EL P+DS + ISK  GKEK SS  K+ +
Sbjct: 722  IKRSYTKQHNLPTPARGHFGQMLGGKEINPSSELCPVDSSTSISKFHGKEKFSSKRKETR 781

Query: 776  ATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEA 835
              EV  DLHPMQS++LG DRRYNRYWLFLGPCN  DPGHKRVYFESSEDGHWEVIDTEEA
Sbjct: 782  EAEVGLDLHPMQSVFLGPDRRYNRYWLFLGPCNANDPGHKRVYFESSEDGHWEVIDTEEA 841

Query: 836  LRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVRED 895
              ALLSVLD RG++EA L+ SLEKR+A LCQ MSS +  ++    + Q D+S+L ++RED
Sbjct: 842  FCALLSVLDGRGKREAFLLASLEKRKASLCQEMSSRIAIHSGSTSLTQYDRSDLYMIRED 901

Query: 896  SSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLN 955
            SSSPVSD+ +N   ++I  + L S GAIVL VGKKGEEQ + W RLQEFDAWIW+SFY +
Sbjct: 902  SSSPVSDIVDNPCATDITNDFLASSGAIVLGVGKKGEEQKQRWRRLQEFDAWIWSSFYSD 961

Query: 956  LNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRGKG 1015
            LNAVKHGKR+YLD+LARCE CHDLYWRDEKHCK CHTTFELDFDLEE+YA+H ATCR K 
Sbjct: 962  LNAVKHGKRTYLDSLARCESCHDLYWRDEKHCKTCHTTFELDFDLEEKYAIHIATCREKE 1021

Query: 1016 DH-LVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELL 1074
            D+ +  KHK+LSSQLQSLKAA+HAIESVMPEDALV AW+KSAHKLWV+RLRRTS L ELL
Sbjct: 1022 DNDMFPKHKVLSSQLQSLKAAIHAIESVMPEDALVEAWSKSAHKLWVRRLRRTSYLTELL 1081

Query: 1075 QVVADFVSAINEGWLYQWNVQI-ADTVMGEIIAFFPTMPQTSSALALWLVKLDAIIAPYL 1133
            QV+ADFV AI E WL Q +V + ++ ++ EI+  F TMPQTSSA+ALWLVKLDA+IAP+L
Sbjct: 1082 QVLADFVGAIKEDWLCQSDVVLGSNNLLEEIVVSFSTMPQTSSAVALWLVKLDALIAPHL 1141

Query: 1134 ERV 1136
            ERV
Sbjct: 1142 ERV 1144


>gi|297736146|emb|CBI24184.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score = 1311 bits (3392), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 702/1173 (59%), Positives = 852/1173 (72%), Gaps = 55/1173 (4%)

Query: 3    VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
            ++RKTPLQ K L   YSE+ YPT+  M+  AAAL LTYKQVR WF E+RR++K +NG+ +
Sbjct: 22   IRRKTPLQLKTLESLYSEDNYPTQRVMKDYAAALGLTYKQVRGWFFERRRKEKNENGMGV 81

Query: 63   PSSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKKNAVTVLQDLLT 122
             S +      ++ R  LG       +  DS    +          GK  N     +DL T
Sbjct: 82   SSRNMSSSSTYN-RACLGAHHWHCFRNHDSRAVER----------GKILN-----EDLST 125

Query: 123  SDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCPPLQENQTAKRKRKVSIHD-EL 181
            +DYILKKVFRKDGPPLGVEFDSLPS +F    DS NS    QENQT+ ++RKV +    +
Sbjct: 126  TDYILKKVFRKDGPPLGVEFDSLPSSSFCHCTDSRNSHRTCQENQTSSKRRKVVVSKPAV 185

Query: 182  DHQECCTNTDHVRK-HGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATPLSQK 240
             HQ+ C N     K HG+GKGLMT WR  NP  G  PTGID AD QV  V   +T + +K
Sbjct: 186  LHQQFCNNKSAPAKIHGIGKGLMTVWRATNPGAGDFPTGIDFADGQVAAVSPTSTSILRK 245

Query: 241  PPLRKKRAQQIVSLLKQRRLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSV 300
              ++KK+ ++  S+ K + +   L  K+KP  K  +V+ +K    ++PNKEKCELA +  
Sbjct: 246  SLIKKKKPRKQSSVTKWKSVGGKLNDKKKPSRKRGKVECNKDVNQKKPNKEKCELALEEG 305

Query: 301  ISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVK 360
             SQE LDQ AML+DDEELEL+E + GPNP TC  H +T GLHGCSLC+DLLAKFPPN+VK
Sbjct: 306  KSQEHLDQFAMLMDDEELELQESQAGPNPVTCSAHFATNGLHGCSLCKDLLAKFPPNAVK 365

Query: 361  MKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIH 420
            MKQPF  QPWDSSPE VKK+FKV HFL TY+ +VD+C FTLDEFAQAFHD+DS+LLGK+H
Sbjct: 366  MKQPFCMQPWDSSPELVKKMFKVLHFLYTYSVVVDVCPFTLDEFAQAFHDEDSLLLGKVH 425

Query: 421  VALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILR 480
            +ALL LLLSDVE EL  G  PH+  +CKFL LL SV   EF ++FW +SLNPLTWTEILR
Sbjct: 426  LALLNLLLSDVETELSSGFLPHVIKNCKFLGLLQSVGQNEFVLKFWKRSLNPLTWTEILR 485

Query: 481  QVLVAAGFGSKQGSSRKESLSK---------------------------------EMILM 507
            QVLVAAGFGS++G+ R+E+L K                                 E+  M
Sbjct: 486  QVLVAAGFGSRKGTLRREALDKKAGLKGRVVPFCLMVDCLLKCLLPFYFPLAPMFELNPM 545

Query: 508  LKYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSD 567
            +KYGLRPGTLKGELF IL  QGNNG KV  LAR  QI+ELNL  TT+E+ELLI STLSSD
Sbjct: 546  VKYGLRPGTLKGELFSILSNQGNNGMKVPDLARCVQISELNLAGTTDELELLIYSTLSSD 605

Query: 568  ITLFEKIASSTYRLRINT-SKEADDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSENQR 626
            ITL+EKI+SS+YRLRI + + EA++F+SD +D GS+DD+S D    S+ DDS+ +S    
Sbjct: 606  ITLYEKISSSSYRLRITSHTNEAENFQSDTDDSGSIDDDSKDSRKYSSSDDSDSDSGTSN 665

Query: 627  QRRPKYLNCCKSENNMLTVYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLV 686
              +  Y+N  K  N MLT+Y EIDES+ G+VWL GLMEGEYSDL+I+EKLNAL+ L+DLV
Sbjct: 666  LGKLNYMNHHKQRNGMLTIYTEIDESNPGEVWLLGLMEGEYSDLSIEEKLNALMALVDLV 725

Query: 687  SAGSSIRMEDPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRETNT 746
            S GSSIRMED TKA+ E VP++ HYGSGAKIKR+   QH+LP P+  H G   G +E N 
Sbjct: 726  SGGSSIRMEDLTKAVVEYVPNIHHYGSGAKIKRSYTKQHNLPTPARGHFGQMLGGKEINP 785

Query: 747  SRELHPLDSFSLISKSCGKEK-SSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLG 805
            S EL P+DS + ISK  GKEK SS  K+ +  EV  DLHPMQS++LG DRRYNRYWLFLG
Sbjct: 786  SSELCPVDSSTSISKFHGKEKFSSKRKETREAEVGLDLHPMQSVFLGPDRRYNRYWLFLG 845

Query: 806  PCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLC 865
            PCN  DPGHKRVYFESSEDGHWEVIDTEEA  ALLSVLD RG++EA L+ SLEKR+A LC
Sbjct: 846  PCNANDPGHKRVYFESSEDGHWEVIDTEEAFCALLSVLDGRGKREAFLLASLEKRKASLC 905

Query: 866  QAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVL 925
            Q MSS +  ++    + Q D+S+L ++REDSSSPVSD+ +N   ++I  + L S GAIVL
Sbjct: 906  QEMSSRIAIHSGSTSLTQYDRSDLYMIREDSSSPVSDIVDNPCATDITNDFLASSGAIVL 965

Query: 926  DVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEK 985
             VGKKGEEQ + W RLQEFDAWIW+SFY +LNAVKHGKR+YLD+LARCE CHDLYWRDEK
Sbjct: 966  GVGKKGEEQKQRWRRLQEFDAWIWSSFYSDLNAVKHGKRTYLDSLARCESCHDLYWRDEK 1025

Query: 986  HCKICHTTFELDFDLEERYAVHAATCRGKGDH-LVSKHKILSSQLQSLKAAVHAIESVMP 1044
            HCK CHTTFELDFDLEE+YA+H ATCR K D+ +  KHK+LSSQLQSLKAA+HAIESVMP
Sbjct: 1026 HCKTCHTTFELDFDLEEKYAIHIATCREKEDNDMFPKHKVLSSQLQSLKAAIHAIESVMP 1085

Query: 1045 EDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQI-ADTVMGE 1103
            EDALV AW+KSAHKLWV+RLRRTS L ELLQV+ADFV AI E WL Q +V + ++ ++ E
Sbjct: 1086 EDALVEAWSKSAHKLWVRRLRRTSYLTELLQVLADFVGAIKEDWLCQSDVVLGSNNLLEE 1145

Query: 1104 IIAFFPTMPQTSSALALWLVKLDAIIAPYLERV 1136
            I+  F TMPQTSSA+ALWLVKLDA+IAP+LERV
Sbjct: 1146 IVVSFSTMPQTSSAVALWLVKLDALIAPHLERV 1178


>gi|324388022|gb|ADY38784.1| sequence-specific DNA-binding transcription factor [Coffea arabica]
          Length = 1116

 Score = 1164 bits (3012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1073 (57%), Positives = 766/1073 (71%), Gaps = 86/1073 (8%)

Query: 120  LLTSDYILKKVFRKDGPPLGVEFDSLPSQAFFR----SKDSINSCPPLQENQTAKRKRKV 175
            L  SDYIL+K+FRKDGP LGVEFDSLP  AF      S+ S  +C   QENQ   +++KV
Sbjct: 60   LFNSDYILQKIFRKDGPALGVEFDSLPENAFRYCRPGSRKSHRTC---QENQRTFKRQKV 116

Query: 176  SIHDELDHQEC----CTNTDH------------------------------VRKHGMGKG 201
            S    LD+Q C     T   H                              ++KHG+GKG
Sbjct: 117  ST--PLDYQACPEPRSTTIKHGIGKGLMAKNGTPVKRHGIGKGLMTKKSAPMKKHGIGKG 174

Query: 202  LMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATPLSQKPPLRKKRA-QQIVSLLKQRRL 260
            LMT WRV NP+GG  PTGI             ++  S    L KK++ Q+  SL+  R+L
Sbjct: 175  LMTVWRVTNPDGGDFPTGIG------------SSTFSNFSLLAKKKSLQRRQSLM--RKL 220

Query: 261  ANNLQSKRKPVAKGKQVKLDKG-----ERLRQPNKEKCELAPDSVISQERLDQIAMLVDD 315
               LQ K+K   + ++     G     E+ +Q  KEKCELA + +  +E LDQ+  LVDD
Sbjct: 221  GKRLQEKKKASVRCRKEIHGMGASGRFEQRKQARKEKCELALEGLTCEENLDQLVNLVDD 280

Query: 316  EELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPE 375
            EELEL+EL+ GPNP +C  H++T G HGCSLC+DLLAKFPP+SV MK+P   QPWDSSPE
Sbjct: 281  EELELKELQAGPNPLSCSAHLATNGSHGCSLCKDLLAKFPPDSVVMKRPLYGQPWDSSPE 340

Query: 376  TVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMEL 435
             VKKLFKVFHFLCTYA  +D+CSFT DEFAQ F DKDS+LLG++H+ALLK+LLSD+EMEL
Sbjct: 341  LVKKLFKVFHFLCTYALKIDVCSFTFDEFAQGFQDKDSLLLGQVHLALLKVLLSDIEMEL 400

Query: 436  GRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSS 495
              G   H S + KFL LLHS++ ++F +E W ++LN LTWTEILRQVLVAAGFGSK   S
Sbjct: 401  NSGFFSHSSKNSKFLELLHSIDQEKFLLELWQRALNALTWTEILRQVLVAAGFGSKCVRS 460

Query: 496  RKESLSKEMILMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEE 555
              E+ +KE+ LM KYGL PGTLKGELF +LL  GNNG KV +L +   IAELN+ +T ++
Sbjct: 461  PGEARNKEVSLMAKYGLSPGTLKGELFSVLLNHGNNGLKVSELTKIPSIAELNIAATADK 520

Query: 556  VELLISSTLSSDITLFEKIASSTYRLRINTS-KEADDFESDAEDIGSVDDNSDDDDTCSN 614
            +ELLISSTLSSDITLFE+I+SS YRLR+N + KE+++F SD+ED GSVDD+SD     S+
Sbjct: 521  LELLISSTLSSDITLFERISSSGYRLRVNPAIKESENFPSDSEDFGSVDDDSDTGGGHSS 580

Query: 615  RDDSECNSENQR----QRRPKYLNCCKSENNMLTVYMEIDESHRGDVWLSGLMEGEYSDL 670
             +DSEC + + R    +RR  Y++     NNMLTV  EIDESH G+VWL GLMEGEYSDL
Sbjct: 581  AEDSECETRSSRSNKLRRRKNYMS-----NNMLTVSTEIDESHPGEVWLLGLMEGEYSDL 635

Query: 671  TIDEKLNALVGLIDLVSAGSSIRMEDPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPRP 730
            +I+EKL AL+ LIDLVS+GSS+R+EDP  AI   VP++  + +GAKIKR+   Q++ PR 
Sbjct: 636  SIEEKLCALLALIDLVSSGSSVRLEDPVAAITTFVPNMTQHSTGAKIKRSTAKQYNFPR- 694

Query: 731  SWVHAGDFHGV--RETNTSRELHPLDSFSLISKSCGKEKSSSV-KDAKATEVSTDLHPMQ 787
                AG + G   R+ +++  L+P+DS  L+SK+  +E+S S+ KD +  E S DLHPMQ
Sbjct: 695  ---QAGGYCGANGRDASSTSVLNPIDSLVLMSKTSERERSCSMRKDNREMEASEDLHPMQ 751

Query: 788  SIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRG 847
            SIYLGSDRRYNRYWLFLGPCN  DPGHKR+YFESSEDG+WE ID EEAL +L+S LD RG
Sbjct: 752  SIYLGSDRRYNRYWLFLGPCNGSDPGHKRIYFESSEDGNWEFIDNEEALCSLVSSLDRRG 811

Query: 848  RQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPVSDVDNNL 907
            ++EA L+ SLEKRE +LC+AMS+ +VN+  I  +  SDQS+ +  REDS S VSDVDNNL
Sbjct: 812  QREAFLLSSLEKRELYLCRAMSN-VVNDAGIGQLNHSDQSDQNTSREDSLSAVSDVDNNL 870

Query: 908  ALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYL 967
            +L E+ K+ +PS GA+V ++ +K E+Q   W+  Q FD WIW SFY NLNAVKHGKRSY+
Sbjct: 871  SLIEVQKD-VPS-GAVVFEM-RKAEQQRHRWNLTQAFDRWIWKSFYSNLNAVKHGKRSYV 927

Query: 968  DALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRGKGD-HLVSKHKILS 1026
            D+L RCE CHDLYWRDEKHCK+CHTTFELDFDLEERYAVH ATCRG  D +   +HK+LS
Sbjct: 928  DSLTRCEHCHDLYWRDEKHCKVCHTTFELDFDLEERYAVHTATCRGNLDVNKFPRHKVLS 987

Query: 1027 SQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINE 1086
            SQLQSLKAA+ AIESVMP D LV +W KSAH LWVKRLRR S+LAE LQV+ DFVSAINE
Sbjct: 988  SQLQSLKAAICAIESVMPGDLLVDSWAKSAHNLWVKRLRRASTLAECLQVIGDFVSAINE 1047

Query: 1087 GWLYQWNVQI-ADTVMGEIIAFFPTMPQTSSALALWLVKLDAIIAPYLERVNS 1138
               YQ +  + ++ VM +I++ FPTMPQTSSA A WLVKLD +IAP+LERV S
Sbjct: 1048 DSFYQCDDSVESNCVMEDILSSFPTMPQTSSAFAFWLVKLDELIAPHLERVKS 1100


>gi|356527716|ref|XP_003532454.1| PREDICTED: uncharacterized protein LOC100792062 [Glycine max]
          Length = 1164

 Score = 1159 bits (2998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1062 (59%), Positives = 764/1062 (71%), Gaps = 53/1062 (4%)

Query: 102  MVCNGTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCP 161
            M      KKK     LQ+L T+DYI+  V RKDGPPLG EFD LPS      K  I++C 
Sbjct: 58   MAVTSNVKKKQKRKGLQELFTTDYIVNSVLRKDGPPLGQEFDFLPSGP----KYFISAC- 112

Query: 162  PLQENQTAKRKRKVSIHDELDHQECCTNTDHVRKHGMGKGLMTAWRVMNPNGGTVPTGID 221
              +E+Q + ++RKV         +C      V+KHG+GKGLMT WR  NP+ G +P G  
Sbjct: 113  --EEDQGSSKRRKVPNSATRSLADCNMKAP-VKKHGIGKGLMTVWRATNPDIGDLPFGFG 169

Query: 222  VADRQVTVVPQMATPLSQKPPLRKKRAQQIV-------SLLKQRRLANNLQSKRKPVAKG 274
            V+ ++V ++     P     P+R+ R+ + V       S ++ +R  N  Q KRK   + 
Sbjct: 170  VSGQEVPLISNSTGP----KPVRENRSWKTVNRNGTPKSKMQNKR--NKSQDKRKLTMQR 223

Query: 275  KQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCD 334
            +   L+      Q  KEKCELA DS IS+E +D+I++L DDEELELREL+ G N   CCD
Sbjct: 224  RVGDLNLNVTQNQSPKEKCELALDSAISEEGVDRISVLFDDEELELRELQEGTNLFMCCD 283

Query: 335  HISTKGLHGCSLCR---------DLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFH 385
            H++  G+ GCSLC+         D+L KFPP+ VKMK+P   QPWDSSPE VKKLFKVFH
Sbjct: 284  HLAAGGMVGCSLCKVINCMWLFTDVLVKFPPDIVKMKKPIHLQPWDSSPEIVKKLFKVFH 343

Query: 386  FLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSV 445
            F+ TYA IVDIC FTLDEF QAFHDKDSMLLGKIHVALL LL+SD+E+EL  G  PHL+ 
Sbjct: 344  FIYTYAIIVDICPFTLDEFVQAFHDKDSMLLGKIHVALLTLLVSDIEVELTNGFSPHLNK 403

Query: 446  SCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMI 505
            SC FLALLHSVE+QE+ ++FW +SLN LTW EIL QVLVA+GFGSKQGS R E L+KE+ 
Sbjct: 404  SCNFLALLHSVESQEYSLDFWRRSLNSLTWIEILHQVLVASGFGSKQGSLRGEVLNKELN 463

Query: 506  LMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLS 565
            L++ YGL PGTLK ELF IL E+GN G KV +LA+S QIAELNL ST EE+E LI STLS
Sbjct: 464  LLVNYGLCPGTLKSELFNILSERGNIGCKVAELAKSMQIAELNLASTPEELESLICSTLS 523

Query: 566  SDITLFEKIASSTYRLRINT-SKEADDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSEN 624
            SDITLFEKI+S+ YRLR++T  K+ D+  SD ED GSVDD  +D DTCS+ DD E +  N
Sbjct: 524  SDITLFEKISSTAYRLRMSTVMKDGDESHSDTEDFGSVDDELNDTDTCSSGDDFESDPIN 583

Query: 625  QRQRRPKYLNCCKSENNMLTVYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLID 684
               R+ K  +  K  NNML VY EIDESH G+ WL GLME EYSDL I+EKLNAL  L D
Sbjct: 584  SSIRKLKRASSHK--NNMLKVYTEIDESHPGEAWLLGLMESEYSDLNIEEKLNALAALTD 641

Query: 685  LVSAGSSIRMEDPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRET 744
            LVS+GSSIRM+D TK  A+   S++  GSGAKIKR+   +   P P W         ++ 
Sbjct: 642  LVSSGSSIRMKDSTKVAADCNSSIQLQGSGAKIKRSAVKK---PGPLW--------NQKL 690

Query: 745  NTSRELHPLDSFSLISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFL 804
            + + +   +DS SLIS+   +E  +S +  K + +S   HP+QS++LGSDRRYNRYWLFL
Sbjct: 691  HLNSDPCTVDSSSLISRLHSRE--ASFEKGKGSSIS---HPIQSVFLGSDRRYNRYWLFL 745

Query: 805  GPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFL 864
            GPCN  DPGH+R+YFESSEDGHWEVIDTEEAL ALLSVLDDRG +EALLIESLE+R+A L
Sbjct: 746  GPCNVDDPGHRRIYFESSEDGHWEVIDTEEALCALLSVLDDRGNREALLIESLERRQASL 805

Query: 865  CQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIV 924
            C++MS   VN+T    ++ SDQSELD+V +DS SP SDVD NL L+E  K+SLPS GA+V
Sbjct: 806  CRSMSRINVNSTGKGSMSHSDQSELDMVTDDSYSPASDVD-NLNLTETAKDSLPSAGAVV 864

Query: 925  LDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDE 984
            +  GKKGEEQ + W R+QE+D WIWNSFY +LN VK+GKRSYLD+LARC+ CHDLYWRDE
Sbjct: 865  IKAGKKGEEQIKKWIRVQEYDTWIWNSFYSDLNVVKYGKRSYLDSLARCKSCHDLYWRDE 924

Query: 985  KHCKICHTTFELDFDLEERYAVHAATCRGKGD-HLVSKHKILSSQLQSLKAAVHAIESVM 1043
            +HCKICH TFELDFDLEERYA+H ATCR K D +    HK+L SQ+QSLKAAV+AIESVM
Sbjct: 925  RHCKICHMTFELDFDLEERYAIHIATCREKEDSNTFPNHKVLPSQIQSLKAAVYAIESVM 984

Query: 1044 PEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMGE 1103
            PEDALVGAW KSAHKLWVKRLRRTS+L ELLQV+ADFV AIN+ WL+Q   +    ++ E
Sbjct: 985  PEDALVGAWRKSAHKLWVKRLRRTSTLVELLQVLADFVGAINKDWLFQ--CKFPHGLVEE 1042

Query: 1104 IIAFFPTMPQTSSALALWLVKLDAIIAPYLERVNSGKEDARM 1145
            IIA F +MP TSSALALWLVKLDAIIAPYL+RV+  K+   M
Sbjct: 1043 IIASFASMPHTSSALALWLVKLDAIIAPYLDRVHLQKKQGTM 1084


>gi|356511419|ref|XP_003524424.1| PREDICTED: uncharacterized protein LOC100802783 [Glycine max]
          Length = 1108

 Score = 1135 bits (2937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1098 (57%), Positives = 780/1098 (71%), Gaps = 50/1098 (4%)

Query: 54   DKGDNGIVIPSSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSL-MVCNGTGKKKN 112
            D+G+NG+++   +S+       R R G V +++     +   +   S  +      KKK 
Sbjct: 12   DRGENGVIV---ASRAFPHDEFRPRGGKVLSRVAAVAAARNGSSTSSYDIAVTRNVKKKQ 68

Query: 113  AVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPS-QAFFRSKDSINSCPPLQENQTAKR 171
                L++L T+DYI+  V RKDGP LG EFD LPS   +F S     +C   QE+Q + +
Sbjct: 69   KRKGLRELFTTDYIVNSVLRKDGPTLGQEFDFLPSGPKYFTS-----AC---QEDQGSFK 120

Query: 172  KRKVSIHDELDHQECCTNTDHVRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVP 231
            +RKV  +        C     V+KHG+GKGLMT WR  NP+ G +P G  V+ ++V   P
Sbjct: 121  RRKVP-NSAFQSLANCNMKAPVKKHGIGKGLMTVWRETNPDAGDLPFGFGVSGQEV---P 176

Query: 232  QMATPLSQKPPLRKKRAQQIVSLL-----KQRRLANNLQSKRKPVAKGKQVKLDKGERLR 286
             ++  + QKP  +  R+ + V+       K +   N  Q KRK   + +  +L+      
Sbjct: 177  LISNSIGQKPVRKNNRSWKTVNRNGMPKNKTQNKRNKSQDKRKLTMQRRVGELNLNVTQN 236

Query: 287  QPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCS- 345
            Q  KEKCELA DS IS+E +D+ +ML DDEELELREL+ G N      ++S    H C  
Sbjct: 237  QSPKEKCELALDSAISEEGVDRFSMLFDDEELELRELQEGTNLSNVLINVS----HCCMW 292

Query: 346  LCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFA 405
            L  D+L KFPP+ VKMK+P   QPWDSSPE VKKLFKVFHF+ TYA IVDIC FTLDEF 
Sbjct: 293  LFTDVLVKFPPDIVKMKKPIHLQPWDSSPEIVKKLFKVFHFIYTYAIIVDICPFTLDEFV 352

Query: 406  QAFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEF 465
            QAFHDKDSMLLGKIHVALL LLLSD+E+E+  G  PHL+ SC FLALLHSVE+QE+ ++F
Sbjct: 353  QAFHDKDSMLLGKIHVALLTLLLSDIEVEITNGFSPHLNKSCNFLALLHSVESQEYSLDF 412

Query: 466  WNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRIL 525
            W +SLN LTW EILRQVLVA+GFGSKQGS R+E L+KE+ L++ YGL PGTLK ELF IL
Sbjct: 413  WRRSLNSLTWIEILRQVLVASGFGSKQGSLRREVLNKELNLLVNYGLCPGTLKSELFNIL 472

Query: 526  LEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINT 585
             E+GN G KV ++A+S QIAELNL STTE +E LI STLSSDITLFEKI+S+ YRLR+++
Sbjct: 473  SERGNIGCKVAEMAKSMQIAELNLASTTEGLESLICSTLSSDITLFEKISSTAYRLRMSS 532

Query: 586  -SKEADDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSENQRQRRPKYLNCCKSENNMLT 644
             +K+ D+ +SD ED GSVDD  +  DTCS+ DD E +S N  +R+ K  N  K  NNML 
Sbjct: 533  VTKDGDESDSDTEDSGSVDDEFNVADTCSSGDDFESDSINSSKRKLKRANSHK--NNMLK 590

Query: 645  VYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRMEDPTKAIAES 704
            VY EIDESH G+ WL GLME EYSDL I+EKLNAL  L DLVS+GSSIRM+D TK  A+ 
Sbjct: 591  VYTEIDESHPGEAWLLGLMESEYSDLNIEEKLNALASLTDLVSSGSSIRMKDSTKVTADC 650

Query: 705  VPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLDSFSLISKSCG 764
               ++  GSGAKIKR+   +   P P W         ++ + + +   +DS SLIS+   
Sbjct: 651  NSGIQLRGSGAKIKRSAVKK---PGPLW--------NQKVHLNSDPCAVDSSSLISRFHT 699

Query: 765  KEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSED 824
             E  +S    K + +S   HP+QS++LGSDRRYNRYWLFLGPCN  DPGH+R+YFESSED
Sbjct: 700  HE--ASFGKGKVSFIS---HPIQSVFLGSDRRYNRYWLFLGPCNVDDPGHRRIYFESSED 754

Query: 825  GHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQS 884
            GHWEVIDTEEAL ALLSVLDDRG++EALLIESLE+R   LC++MS    N+T +  ++ S
Sbjct: 755  GHWEVIDTEEALCALLSVLDDRGKREALLIESLERRRTSLCRSMSRINANSTGMGSMSHS 814

Query: 885  DQSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEF 944
            DQSELD+V++DS SP SDVD NL L+E  ++SLPS GA+V++ GKKGEEQ + W R+QE+
Sbjct: 815  DQSELDMVKDDSYSPASDVD-NLNLTETAEDSLPSAGAVVIEAGKKGEEQIQKWIRVQEY 873

Query: 945  DAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERY 1004
            D+WIWNSFYL+LN VK+GKRSYLD+LARC+ CHDLYWRDE+HCKICH TFELDFDLEERY
Sbjct: 874  DSWIWNSFYLDLNVVKYGKRSYLDSLARCKSCHDLYWRDERHCKICHMTFELDFDLEERY 933

Query: 1005 AVHAATCRGKGD-HLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKR 1063
            A+H ATCR K D +    HK+LSSQ+QSLKAAV+AIESVMPEDA+VGAW KSAHKLWVKR
Sbjct: 934  AIHIATCREKEDSNTFPDHKVLSSQIQSLKAAVYAIESVMPEDAMVGAWRKSAHKLWVKR 993

Query: 1064 LRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMGEIIAFFPTMPQTSSALALWLV 1123
            LRRTS+L ELLQV+ DFV AIN+ WLYQ   +  D V+ EIIA F +MP T SALALWLV
Sbjct: 994  LRRTSTLVELLQVLTDFVGAINKDWLYQ--CKFLDGVVEEIIASFASMPHTPSALALWLV 1051

Query: 1124 KLDAIIAPYLERVNSGKE 1141
            KLDAIIAPYL+RV+  K+
Sbjct: 1052 KLDAIIAPYLDRVHLQKK 1069


>gi|221222542|gb|ABZ89177.1| putative protein [Coffea canephora]
          Length = 1156

 Score = 1115 bits (2884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1108 (55%), Positives = 762/1108 (68%), Gaps = 116/1108 (10%)

Query: 120  LLTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKD-----SINSCPPLQ---------- 164
            L  SDYIL+K+FRKDGP LGVEFDSLP  AF   +       I  C  L           
Sbjct: 60   LFNSDYILQKIFRKDGPALGVEFDSLPENAFRYCRPVYVNVDIYRCAYLTRVIDLLMCDQ 119

Query: 165  --ENQTAKRKR------------KVSIHDELDHQEC----CTNTDH-------------- 192
              E+ TA  KR            K  +   LD+Q C     T   H              
Sbjct: 120  APESLTAPAKRTKEHLKGKRYRKKFWVSTPLDYQACPEPRSTTIKHGIGKGLMAKNGTPV 179

Query: 193  ----------------VRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATP 236
                            ++KHG+GKGLMT WRV NP+GG  PTGI             ++ 
Sbjct: 180  KRHGIGKGLMTKKSAPMKKHGIGKGLMTVWRVTNPDGGDFPTGIG------------SST 227

Query: 237  LSQKPPLRKKRA-QQIVSLLKQRRLANNLQSKRKPVAKGKQVKLDKG-----ERLRQPNK 290
             S    L KK++ Q+  SL+  R+L   LQ K+K   + ++     G     E+ +Q  K
Sbjct: 228  FSNFSLLAKKKSLQRRQSLM--RKLGKRLQEKKKASVRCRKEIHGMGASGRFEQRKQARK 285

Query: 291  EKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDL 350
            EKCELA + +  +E LDQ+  L DDEELEL+EL+ GPNP +C  H++T G HGCSLC+DL
Sbjct: 286  EKCELALEGLTCEENLDQLVNLEDDEELELKELQAGPNPLSCSAHLATNGSHGCSLCKDL 345

Query: 351  LAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHD 410
            LAKFPP+SV MK+P   QPWDSSPE VKKLFKVFHFLCTYA  + +CSFT DEFAQ F D
Sbjct: 346  LAKFPPDSVVMKRPLYGQPWDSSPELVKKLFKVFHFLCTYALKIGVCSFTFDEFAQGFQD 405

Query: 411  KDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSL 470
            KDS+LLG++H+ALLK+LLSD+EMEL  G   H S + KFL LLHS++ ++F +E W ++L
Sbjct: 406  KDSLLLGQVHLALLKVLLSDIEMELNSGFFSHSSKNSKFLELLHSIDQEKFLLELWQRAL 465

Query: 471  NPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQGN 530
            N LTWTEILRQVLVAAGFGSK   S +E+ +KE+ LM KYGL PGTLKGELF +LL  GN
Sbjct: 466  NALTWTEILRQVLVAAGFGSKCVRSTREARNKEVSLMAKYGLSPGTLKGELFSVLLNHGN 525

Query: 531  NGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTS-KEA 589
            NG KV +L +   IAELN+ +T +++ELLISSTLSSDITLFE+I+SS YRLR+N + KE+
Sbjct: 526  NGLKVSELTKIPSIAELNIAATADKLELLISSTLSSDITLFERISSSGYRLRVNPAIKES 585

Query: 590  DDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSE----NQRQRRPKYLNCCKSENNMLTV 645
            ++F SD+ED GSVDD+SD     S+ +DSEC +     N+ +RR  Y++     NNMLTV
Sbjct: 586  ENFVSDSEDFGSVDDDSDTGGGHSSAEDSECETRSSHSNKLRRRKNYMS-----NNMLTV 640

Query: 646  YMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRME---------- 695
              EIDESH G+VWL GLMEGEYSDL+I+EKL AL+ LIDLVS+GSS+R+E          
Sbjct: 641  STEIDESHPGEVWLLGLMEGEYSDLSIEEKLCALLALIDLVSSGSSVRLEVVHLSFRRYK 700

Query: 696  DPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGV--RETNTSRELHPL 753
            DP  AI   VP++  + +GAKIKR+   Q++ PR     AG + G   R+  ++  L+P+
Sbjct: 701  DPVAAITTFVPNMTQHSTGAKIKRSTAKQYNFPR----QAGGYCGANGRDATSTSVLNPI 756

Query: 754  DSFSLISKSCGKEKSSSV-KDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDP 812
            DS  L+SK+  +E+S S+ KD +  E S DLHPMQSIYLGSDRRYNRYWLFLGPCN  DP
Sbjct: 757  DSLVLMSKTSERERSCSMRKDNREMEASEDLHPMQSIYLGSDRRYNRYWLFLGPCNGSDP 816

Query: 813  GHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGL 872
            GHKR+YFESSEDG+WE ID EEAL +L+S LD RG++EA L+ SLEKRE +LC+AMS+ +
Sbjct: 817  GHKRIYFESSEDGNWEFIDNEEALCSLVSSLDRRGQREAFLLSSLEKRELYLCRAMSN-V 875

Query: 873  VNNTEIRHVAQSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGE 932
            VN+  I  +  SDQS+ +  REDS S VSDVDNNL+L E+ K+ +PS GA+V ++ K  +
Sbjct: 876  VNDAGIGQLNHSDQSDQNTSREDSLSAVSDVDNNLSLIEVQKD-VPS-GAVVFEMRKAEQ 933

Query: 933  EQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHT 992
            ++HR W+  Q FD WIW SFY NLNAVKHGKRSY+D+L RCE CHDLYWRDEKHCK+CHT
Sbjct: 934  QRHR-WNLTQAFDRWIWKSFYSNLNAVKHGKRSYVDSLTRCEHCHDLYWRDEKHCKVCHT 992

Query: 993  TFELDFDLEERYAVHAATCRGKGD-HLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGA 1051
            TFELDFDLEERYAVH ATCRG  D +   +HK+LSSQLQSLKAA+ AIESVMP D LV +
Sbjct: 993  TFELDFDLEERYAVHTATCRGNLDVNKFPRHKVLSSQLQSLKAAICAIESVMPGDLLVDS 1052

Query: 1052 WTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQI-ADTVMGEIIAFFPT 1110
            W KSAH LWVKRLRR S+LAE LQV+ DFVSAINE   YQ +  + ++ VM +I++ FPT
Sbjct: 1053 WAKSAHNLWVKRLRRASTLAECLQVIGDFVSAINEDCFYQCDDSVESNCVMEDILSSFPT 1112

Query: 1111 MPQTSSALALWLVKLDAIIAPYLERVNS 1138
            MPQTSSA A WLVKLD +IAP+LERV S
Sbjct: 1113 MPQTSSAFAFWLVKLDELIAPHLERVKS 1140


>gi|326367377|gb|ADZ55295.1| sequence-specific DNA binding protein [Coffea arabica]
          Length = 1156

 Score = 1110 bits (2870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1108 (55%), Positives = 760/1108 (68%), Gaps = 116/1108 (10%)

Query: 120  LLTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKD-----SINSCPPLQ---------- 164
            L  SDYIL+K+FRKDGP LG EFDSLP  AF   +       I  C  L           
Sbjct: 60   LFNSDYILQKIFRKDGPALGFEFDSLPENAFRYCRPVYVNVDIYRCAYLTRVIDLLMCDQ 119

Query: 165  --ENQTAKRKR------------KVSIHDELDHQEC----CTNTDH-------------- 192
              E+ TA  KR            K  +   LD+Q C     T   H              
Sbjct: 120  APESLTAPAKRTKEHLKGKRYRKKFWVSTPLDYQACPEPRSTTIKHGIGKGLMAKNGTPV 179

Query: 193  ----------------VRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATP 236
                            ++KHG+GKGLMT WRV NP+GG  PTGI             ++ 
Sbjct: 180  KRHGIGKGLMTKKSAPMKKHGIGKGLMTVWRVTNPDGGDFPTGIG------------SST 227

Query: 237  LSQKPPLRKKRA-QQIVSLLKQRRLANNLQSKRKPVAKGKQVKLDKG-----ERLRQPNK 290
             S    L KK++ Q+  SL+  R+L   LQ K+K   + ++     G     E+ +Q  K
Sbjct: 228  FSNFSLLAKKKSLQRRQSLM--RKLGKRLQEKKKASVRCRKEIHGMGASGRFEQRKQARK 285

Query: 291  EKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDL 350
            EKCELA + +  +E LDQ+  L DDEELEL+EL+ GPNP +C  H++T G HGCSLC+DL
Sbjct: 286  EKCELALEGLTCEENLDQLVNLEDDEELELKELQAGPNPLSCSAHLATNGSHGCSLCKDL 345

Query: 351  LAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHD 410
            LAKFPP+SV MK+P   QPWDSSPE VKKLFKVFHFLCTYA  + +CSFT DEFAQ F D
Sbjct: 346  LAKFPPDSVVMKRPLYGQPWDSSPELVKKLFKVFHFLCTYALKIGVCSFTFDEFAQGFQD 405

Query: 411  KDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSL 470
            KDS+LLG++H+ALLK+LLSD+EMEL  G   H S + KFL LLHS++ ++  +E W ++L
Sbjct: 406  KDSLLLGQVHLALLKVLLSDIEMELNSGFFSHSSKNSKFLELLHSIDQEKLLLELWQRAL 465

Query: 471  NPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQGN 530
            N LTWTEILRQVLVAAGFGSK   S +E+ +KE+ LM KYGL PGTLKGELF +LL  GN
Sbjct: 466  NALTWTEILRQVLVAAGFGSKCVRSTREARNKEVSLMAKYGLSPGTLKGELFSVLLNHGN 525

Query: 531  NGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTS-KEA 589
            NG KV +L +   IAELN+ +T +++ELLISSTLSSDITLFE+I+SS YRLR+N + KE+
Sbjct: 526  NGLKVSELTKIPSIAELNIAATADKLELLISSTLSSDITLFERISSSGYRLRVNPAIKES 585

Query: 590  DDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSE----NQRQRRPKYLNCCKSENNMLTV 645
            ++F SD+ED GSVDD+SD     S+ +DSEC +     N+ +RR  Y++     NNMLTV
Sbjct: 586  ENFVSDSEDFGSVDDDSDTGGGHSSAEDSECETRSSHSNKLRRRKNYMS-----NNMLTV 640

Query: 646  YMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRME---------- 695
              EIDESH G+VWL GLMEGEYSDL+I+EKL AL+ LIDLVS+GSS+R+E          
Sbjct: 641  STEIDESHPGEVWLLGLMEGEYSDLSIEEKLCALLALIDLVSSGSSVRLEVVHLSFRRYK 700

Query: 696  DPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGV--RETNTSRELHPL 753
            DP  AI   VP++  + +GAKIKR+   Q++ PR     AG + G   R+  ++  L+P+
Sbjct: 701  DPVAAITTFVPNMTQHSTGAKIKRSTAKQYNFPR----QAGGYCGANGRDATSTSVLNPI 756

Query: 754  DSFSLISKSCGKEKSSSV-KDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDP 812
            DS  L+SK+  +E+S S+ KD +  E S DLHPMQSIYLGSDRRYNRYWLFLGPCN  DP
Sbjct: 757  DSLVLMSKTSERERSCSMRKDNREMEASEDLHPMQSIYLGSDRRYNRYWLFLGPCNGSDP 816

Query: 813  GHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGL 872
            GHKR+YFESSEDG+WE ID EEAL +L+S LD RG++EA L+ SLEKRE +LC+AMS+ +
Sbjct: 817  GHKRIYFESSEDGNWEFIDNEEALCSLVSSLDRRGQREAFLLSSLEKRELYLCRAMSN-V 875

Query: 873  VNNTEIRHVAQSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGE 932
            VN+  I  +  SDQS+ +  REDS S VSDVDNNL+L E+ K+ +PS GA+V ++ K  +
Sbjct: 876  VNDAGIGQLNHSDQSDQNTSREDSLSAVSDVDNNLSLIEVQKD-VPS-GAVVFEMRKAEQ 933

Query: 933  EQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHT 992
            ++HR W+  Q FD WIW SFY NLNAVKHGKRSY+D+L RCE CHDLYWRDEKHCK+CHT
Sbjct: 934  QRHR-WNLTQAFDRWIWKSFYSNLNAVKHGKRSYVDSLTRCEHCHDLYWRDEKHCKVCHT 992

Query: 993  TFELDFDLEERYAVHAATCRGKGD-HLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGA 1051
            TFELDFDLEERYAVH ATCRG  D +   +HK+LSSQLQSLKAA+ AIESVMP D LV +
Sbjct: 993  TFELDFDLEERYAVHTATCRGNLDVNKFPRHKVLSSQLQSLKAAICAIESVMPGDLLVDS 1052

Query: 1052 WTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQI-ADTVMGEIIAFFPT 1110
            W KSAH LWVKRLRR S+LAE LQV+ DFVSAINE   YQ +  + ++ VM +I++ FPT
Sbjct: 1053 WAKSAHNLWVKRLRRASTLAECLQVIGDFVSAINEDCFYQCDDSVESNCVMEDILSSFPT 1112

Query: 1111 MPQTSSALALWLVKLDAIIAPYLERVNS 1138
            MPQTSSA A WLVKLD +IAP+LERV S
Sbjct: 1113 MPQTSSAFAFWLVKLDELIAPHLERVKS 1140


>gi|334186462|ref|NP_193011.5| Homeodomain-like transcriptional regulator [Arabidopsis thaliana]
 gi|332657775|gb|AEE83175.1| Homeodomain-like transcriptional regulator [Arabidopsis thaliana]
          Length = 1131

 Score = 1106 bits (2860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1170 (52%), Positives = 785/1170 (67%), Gaps = 72/1170 (6%)

Query: 3    VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
            +KRK+PLQ +AL  FY E+ YPT  EME L  +L LT K+VR WF  +R R KG   +  
Sbjct: 1    MKRKSPLQVQALEGFYLEQMYPTPKEMEDLGKSLGLTLKEVRGWFKRRRSRGKGVKSM-- 58

Query: 63   PSSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKKNAVT-----VL 117
                          + LG  + ++  +  SL+ +   S   C G   ++  +        
Sbjct: 59   ------------ANDGLGAKNPQLYDR--SLMRSSTSSR--CVGVAVEERCIVGTRKASC 102

Query: 118  QDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCPPLQENQTAKRKRKVSI 177
            Q+LL S +IL KVFRKDGP LG EFD LPS A  R    + +    Q+ Q   RKRK+S 
Sbjct: 103  QNLLPSSHILAKVFRKDGPSLGSEFDHLPSGA--RKASWLGTSSVGQQKQKVARKRKIS- 159

Query: 178  HDELDH--QECCTNTDHVRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMAT 235
             + +DH  Q+C      V KHG+GKGLMT WRVMNPN   V   +D+ D + T+ PQ + 
Sbjct: 160  -ELMDHTSQDCIQENATVMKHGIGKGLMTVWRVMNPNRRDVSPCVDLLDERATL-PQSS- 216

Query: 236  PLSQKPPLRKKRAQQIVSLLKQRRLAN-NLQSKRKPVAKGKQVKLDKGERLRQPNKEKCE 294
              ++ PP +KK+ +Q+ S+LKQ+ L   + + KR+ + +  + +L+K E  R+  KE CE
Sbjct: 217  --ARNPPHQKKKQRQLASILKQKLLQKRSTEKKRRSIHR--EAELNKDETQRE-FKENCE 271

Query: 295  LAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCR------ 348
            LA D  + +E    I+ LVDDEELE+RE     NP TC  H  + G HGC LC+      
Sbjct: 272  LAADGEVFKETCQTISTLVDDEELEMRERHERGNPLTCSCHHPSSGSHGCFLCKGIAMRS 331

Query: 349  --------DLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFT 400
                    DLL KFPPNSV+M+ PFG  PW+SSPE+VKKLFKV HFL TY+  +DI  FT
Sbjct: 332  SDSSLLFPDLLPKFPPNSVQMRMPFGLHPWNSSPESVKKLFKVVHFLYTYSVTLDIGPFT 391

Query: 401  LDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQE 460
            LDEF +AFHDKDS+LLGKIH++LLKLLL DVE EL RG   +LS+SCKFLALL SVE+Q 
Sbjct: 392  LDEFTRAFHDKDSLLLGKIHLSLLKLLLLDVETELERGSFSNLSISCKFLALLQSVESQI 451

Query: 461  FFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGE 520
              ++ W  SLN LTWTE+LRQ+LVAAG+GS + + + E LSKE  LM KYGLR GTLKGE
Sbjct: 452  LILDMWRNSLNSLTWTELLRQILVAAGYGSLKCAVQSEELSKERKLMKKYGLRLGTLKGE 511

Query: 521  LFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYR 580
            LFR+L  QGNNG K+ +LA + ++A LNL +  EE E  I STL+SDITLFEKI+ STYR
Sbjct: 512  LFRMLNGQGNNGLKISELADAPEVAVLNLATVPEERENSICSTLASDITLFEKISESTYR 571

Query: 581  LRINTSKEADDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSENQRQRRPKYLNCCKSEN 640
            +R+N   E  D      D     D+  DD + S+ D+ E  SEN   R+ K     K ++
Sbjct: 572  VRVNCFSEDPDKSQSDSDDSGSVDDESDDCSISSGDEIEHVSENPALRKVKCRKRRKHKS 631

Query: 641  NMLTVYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRMEDPTKA 700
             M  V  EIDESH G+ WL GLMEGEYSDL+++EKL+  V LIDL+S+GS+IRMED  +A
Sbjct: 632  KMREVCSEIDESHPGEPWLLGLMEGEYSDLSVEEKLDVFVALIDLLSSGSTIRMEDLPRA 691

Query: 701  IAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLDSFSLIS 760
            +A+  PS+  +GSG KIKR+  NQ+S PR SWVH G+ +G++  + S + HP+DS S++ 
Sbjct: 692  VADCAPSIYSHGSGGKIKRSSSNQYSYPRGSWVHGGELYGIKALSKSSDSHPVDSSSIVG 751

Query: 761  KSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFE 820
                           A   + ++HPMQS+YLGSDRR+NRYWLFLG CN  DPGH+ V+FE
Sbjct: 752  AFA----------KLAGNRANNVHPMQSVYLGSDRRFNRYWLFLGTCNANDPGHRCVFFE 801

Query: 821  SSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRH 880
            SSEDGHWEVI+ +EALRALLSVLDDRGR+EA LIESLEKRE+FLCQAM S  V  +E  H
Sbjct: 802  SSEDGHWEVINNKEALRALLSVLDDRGRREARLIESLEKRESFLCQAMLSRQVTQSETAH 861

Query: 881  VAQSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLPS-CGAIVLDVGKKGEEQHRMWS 939
                     D+VREDSSSPVSD+DNNL L+EI  +   S   AIV ++G K  E+  +WS
Sbjct: 862  FT-------DIVREDSSSPVSDIDNNLCLNEIANDQFSSQHAAIVFEIGSK-REKSLLWS 913

Query: 940  RLQEFDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFD 999
             +QEFD WIW +F  NLN+VKH +RSYLD+L RC+ CHDLYWRDEKHCKICH TFE+D D
Sbjct: 914  LIQEFDDWIWANFNFNLNSVKHRRRSYLDSLTRCKSCHDLYWRDEKHCKICHATFEVDID 973

Query: 1000 LEERYAVHAATCRGKGD-HLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHK 1058
            LEERYA+HAATC  K +      HK+LSSQLQSLKAAV+AIES MPEDAL+GAW KSAH+
Sbjct: 974  LEERYAIHAATCMRKEECDTFPDHKVLSSQLQSLKAAVYAIESAMPEDALIGAWRKSAHR 1033

Query: 1059 LWVKRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMGEIIAFFPTMPQTSSAL 1118
            LW KRLRR+SS++E+ QV+ DFV AINE WL+  + Q   T+MGEII  FP+MPQT+SA+
Sbjct: 1034 LWAKRLRRSSSVSEITQVIGDFVGAINEEWLWHCSDQ-GQTLMGEIINCFPSMPQTTSAI 1092

Query: 1119 ALWLVKLDAIIAPYLERVNSGKEDARMRCR 1148
            ALWLVKLD +IAPY+E+    ++    R R
Sbjct: 1093 ALWLVKLDTLIAPYVEKAPPERDQPLCRTR 1122


>gi|357520649|ref|XP_003630613.1| hypothetical protein MTR_8g101380 [Medicago truncatula]
 gi|355524635|gb|AET05089.1| hypothetical protein MTR_8g101380 [Medicago truncatula]
          Length = 1215

 Score = 1088 bits (2814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1150 (52%), Positives = 746/1150 (64%), Gaps = 150/1150 (13%)

Query: 102  MVCNGTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCP 161
            MV NG  KK      +Q+L T+  I+  V   D P LG EFDSLPS      K+  ++C 
Sbjct: 34   MVVNGNWKKNRKRKSVQELYTTGDIVNTVLLNDAPTLGSEFDSLPSGP----KNYNSAC- 88

Query: 162  PLQENQTAKRKRKVSIHDELDHQEC----------------------------------- 186
              Q++Q   ++RK S      H  C                                   
Sbjct: 89   --QQDQEPVKRRKASKSAIQSHPNCNMKAPVERHGMGKGLATNPNCKMKAPVKRHGMGKG 146

Query: 187  ------CTNTDHVRKHG---------------------MGKGLMTAWRVMNPNGGTVPTG 219
                  C     V++HG                     MGKGLMT WR  N +   +P  
Sbjct: 147  LATNPNCNMKAPVKRHGMGKGLAANPNSNMKAPVKRHGMGKGLMTIWRATNHDARDLPIS 206

Query: 220  IDVADRQVTVVPQMATPLSQKPPLRKKRAQQIVSLLKQRR--LAN---NLQSKRKPVAKG 274
                D+ V +     TP+S        R+Q+ V+   + R  + N    LQ KRK   + 
Sbjct: 207  FGSVDKDVHLTSNTKTPISV------NRSQKAVTTNGKPRNKMPNKKATLQGKRKHFVEK 260

Query: 275  KQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCD 334
               + ++     Q   EKCELA DS IS   +DQI+ML+DDEELELRE++ G N   C D
Sbjct: 261  IVGESNQYATQNQLPIEKCELALDSSISDAGVDQISMLIDDEELELREIQEGSNLLICSD 320

Query: 335  HISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLF------------- 381
             ++  G+ G SLC D+L KFPP  VKMK+P   QPWDSSPE VKKLF             
Sbjct: 321  QLAANGMLGGSLCPDVLVKFPPGDVKMKKPIHLQPWDSSPELVKKLFKRLRWFGHVERKP 380

Query: 382  -----------KVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSD 430
                       KVFHF+ TYA +VD+C FTLDEF QAFHDKDSMLLG+IHVALL LLLSD
Sbjct: 381  VDVVVRRVDQMKVFHFIYTYAVVVDVCPFTLDEFVQAFHDKDSMLLGQIHVALLTLLLSD 440

Query: 431  VEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGS 490
            +E+EL  G  PHL+ SC FLALLHSVENQE+ ++ W +SLNPLTW EILRQVLVAAGFGS
Sbjct: 441  IEVELSNGFCPHLNKSCNFLALLHSVENQEYSLDAWRRSLNPLTWIEILRQVLVAAGFGS 500

Query: 491  KQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLE 550
            KQG+ ++E L KE+ +++ YGL PGTLK ELF+IL E+GNNG KV +LA+S QIAELNL 
Sbjct: 501  KQGAFQREGLGKELDILVNYGLCPGTLKCELFKILSERGNNGCKVSELAKSMQIAELNLS 560

Query: 551  STTEEVELLISSTLSSDITLFEKIASSTYRLRINT-SKEADDFESDAEDIGSVDDNSDDD 609
            STTEE+E LI STLSSDITLFEKI+SS YRLR++T +K+ DD +SD ED GSVDD  +D 
Sbjct: 561  STTEELESLIYSTLSSDITLFEKISSSAYRLRMSTVAKDDDDSQSDTEDSGSVDDELNDS 620

Query: 610  DTCSNRDDSECNSENQRQRRPKYLNCCKSENNMLTVYMEIDESHRGDVWLSGLMEGEYSD 669
            DTCS+ DD    S +   R+ +  N  K+++N L VY EIDESH G+VWL GLM+ EYSD
Sbjct: 621  DTCSSGDDFGSGSIHSNIRKLRRHNSRKAKHNKLKVYTEIDESHAGEVWLLGLMDSEYSD 680

Query: 670  LTIDEKLNALVGLIDLVSAGSSIRMEDPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPR 729
            L I+EKLNAL  L  L+S+GSSIRM+DP K  A+   S++  GSGAKIKR++        
Sbjct: 681  LKIEEKLNALAALTGLLSSGSSIRMKDPVKVTADCSSSIQLRGSGAKIKRSV-------- 732

Query: 730  PSWVHAGDFHGVRETNTSRELH------PLDSFSLISKSCGKEKSSSVKDAKATEVSTDL 783
                     + + +   ++E+H      P+DS  L+SK   +E S      +  +VS   
Sbjct: 733  ---------NPIEQMQCTKEVHMNSHACPVDSSLLVSKFHIQEAS-----LEKRKVSAYS 778

Query: 784  HPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVL 843
            HP+QS++LGSDRRYNRYWLFLGPCN  DPGH+RVYFESSEDGHWEVIDTEEAL ALLSVL
Sbjct: 779  HPIQSVFLGSDRRYNRYWLFLGPCNIDDPGHRRVYFESSEDGHWEVIDTEEALCALLSVL 838

Query: 844  DDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPVSDV 903
            DDRG++EALLIESLE+R+  LC++MS   V+N  +  ++ SDQSELD V EDS SPVSDV
Sbjct: 839  DDRGKREALLIESLERRQTSLCRSMSRIKVSNIGMGCMSHSDQSELDRVAEDSCSPVSDV 898

Query: 904  DNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLNAVKHGK 963
            D NL L+EI  + LPS GA+V++ GKK EEQ   W R+QE+D+WIWNSFYL+LN VK+G+
Sbjct: 899  D-NLNLTEI-TDYLPSPGAVVIEAGKKEEEQLHKWIRVQEYDSWIWNSFYLDLNVVKYGR 956

Query: 964  RSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRGKGD-HLVSKH 1022
            RSYLD+LARC  CHDLYWRDE+HCKICH TFELDFDLEE+YA+H A CR K D +    H
Sbjct: 957  RSYLDSLARCRSCHDLYWRDERHCKICHMTFELDFDLEEKYAIHIAMCREKEDSNTFPNH 1016

Query: 1023 KILSSQLQSLKAAVHAIE------------SVMPEDALVGAWTKSAHKLWVKRLRRTSSL 1070
            K+L SQ+QSLKAA++AIE            SVMPEDALVGAW KSAH LW+KRLRRTS+L
Sbjct: 1017 KVLPSQIQSLKAAIYAIEGLWEGGFGGEGRSVMPEDALVGAWRKSAHNLWIKRLRRTSTL 1076

Query: 1071 AELLQVVADFVSAINEGWLYQWNVQIADTVMGEIIAFFPTMPQTSSALALWLVKLDAIIA 1130
             ELLQV+ADFV A N+ WL+Q   +  D V+ E IA F +MP TSSALALWLVKLDAIIA
Sbjct: 1077 VELLQVLADFVGAFNDSWLFQ--CKFPDGVVEETIASFASMPHTSSALALWLVKLDAIIA 1134

Query: 1131 PYLERVNSGK 1140
            PYL+RV + K
Sbjct: 1135 PYLDRVQTQK 1144


>gi|449466626|ref|XP_004151027.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101218415,
            partial [Cucumis sativus]
          Length = 989

 Score = 1043 bits (2698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/950 (57%), Positives = 684/950 (72%), Gaps = 21/950 (2%)

Query: 193  VRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATPLSQKPPLRKKRAQQIV 252
            ++ HG+GKGLMT W+  NP+ G  P       ++   V  ++T  S+    + KR  +  
Sbjct: 42   IKTHGIGKGLMTVWQATNPDAGDFPARTIFGGQKFMDVSPVSTSSSEHSLRQGKRPPRQA 101

Query: 253  SLLKQRRLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAML 312
             +  + R+ + +Q KRKP+ K ++V+ ++    +Q   EKCELA + + SQE +DQ A+L
Sbjct: 102  KM--KGRVGSKVQGKRKPLIKTRRVECNEENSQKQLCYEKCELAWEGIKSQECIDQFAVL 159

Query: 313  VDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDS 372
            VDDEELEL+EL+   +  T CDH  T G++ CSLC+D+LAKFPPNSVKMKQPFG QPWDS
Sbjct: 160  VDDEELELKELQARKHIITSCDHFMTNGVNSCSLCKDMLAKFPPNSVKMKQPFGMQPWDS 219

Query: 373  SPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE 432
            S +  KKLFKVF+FLCTYA  + +CSFTLDEFA++FHDK+S LLGK+HVALLKLL  D+E
Sbjct: 220  SRDICKKLFKVFNFLCTYATTLGVCSFTLDEFAESFHDKNSFLLGKVHVALLKLLFCDIE 279

Query: 433  MELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQ 492
             E        LS SCKFLAL+HS+ +++F +E W KSLNPLTWTEILRQVLVAAGF SKQ
Sbjct: 280  AEFSNAYLTPLSKSCKFLALVHSLGSKDFALEVWKKSLNPLTWTEILRQVLVAAGFCSKQ 339

Query: 493  GSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLEST 552
             + +KE+LSKEM L+ KYGL+ GTLKGELF IL EQGNNG KV  L R S+I +LN+  T
Sbjct: 340  DALQKETLSKEMDLVSKYGLQRGTLKGELFIILSEQGNNGIKVSDLIRESKIVDLNVAGT 399

Query: 553  TEEVELLISSTLSSDITLFEKIASSTYRLRINTS-KEADDFESDAEDIGSVDDNSDDDDT 611
            TEE+EL I STLSSDITLFEKI+SS YRLR + +  + D+F+SD  D GSVDD +     
Sbjct: 400  TEELELQICSTLSSDITLFEKISSSAYRLRPSPAIMDVDEFQSDT-DFGSVDDIAASASI 458

Query: 612  CSNRDDSECNSENQRQRRPKYLNCCKSENNMLTVYMEIDESHRGDVWLSGLMEGEYSDLT 671
            CS+  DSEC+SE    +R K     KS+N   TV  EID SH G+ WL GLME EYS L+
Sbjct: 459  CSSSYDSECDSEKLCAQRFKIQ---KSKNENPTVSTEIDVSHPGEAWLLGLMEDEYSGLS 515

Query: 672  IDEKLNALVGLIDLVSAGSSIRMEDPTKA--IAESVPSVRHYGSGAKIKRALPNQHSLPR 729
            I+EKLNALV LIDL+S  SSIR +  + +  I +   +++HYGSGAKIK++    H+L  
Sbjct: 516  IEEKLNALVALIDLLSDRSSIRPKGSSTSCGIVDYASNIQHYGSGAKIKKSSVRGHNLSS 575

Query: 730  PSWV-HAGDFHGVRETNTSRELHPLDSFSLISKSCGKEKSSSVKDAKATEVSTDLHPMQS 788
             S++  +G          S E HP+DS + ISK   +   S VK A   + +  LH MQS
Sbjct: 576  RSFLASSGQLRSASIRYASLENHPIDSATAISKF-QENSGSQVKGADKMKNAIYLHSMQS 634

Query: 789  IYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGR 848
            I+LGSDRRYNRY LFLGPC+  DPGH+RVYFESSEDGHWEVIDT+EAL ALL VLDDRG+
Sbjct: 635  IFLGSDRRYNRYXLFLGPCDATDPGHRRVYFESSEDGHWEVIDTKEALCALLFVLDDRGK 694

Query: 849  QEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPVSDVDNNLA 908
            +EA LIESLEKR  FLC+AMS+    N   R   QS+QS++D +RE S SPVSDVDN+L 
Sbjct: 695  REAFLIESLEKRVVFLCEAMSNKSTRNLVSRSFTQSEQSDMDRIRESSYSPVSDVDNSLY 754

Query: 909  LSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLD 968
             +E   ++LP    IVL+V +KGEE+ + W+RLQ FD+W+WN FY  L AV+HG+RSYLD
Sbjct: 755  QAETTGDTLPLSSTIVLEVKRKGEEEKQSWNRLQAFDSWVWNFFYHALYAVRHGRRSYLD 814

Query: 969  ALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRGKG-DHLVSKHKILSS 1027
            +LARCE CHDLYWRDEKHCK+CH TFELD +LEERY +H ATCR KG D++  KHK+LSS
Sbjct: 815  SLARCECCHDLYWRDEKHCKVCHITFELDLNLEERYTIHRATCREKGDDNVFPKHKVLSS 874

Query: 1028 QLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEG 1087
            QLQ+LKA VHAIES+MPE A++GAWTKSAHKLW+KRLRRTSS+AEL+QVVADFV AINE 
Sbjct: 875  QLQALKAGVHAIESIMPEGAMIGAWTKSAHKLWIKRLRRTSSMAELMQVVADFVGAINED 934

Query: 1088 WLYQW----NVQIADTVMGEIIAFFPTMPQTSSALALWLVKLDAIIAPYL 1133
            W        +V I DT     +A F ++PQT+SALA WLVKLDA    Y+
Sbjct: 935  WFCNLPEDSSVCILDT-----LASFASLPQTTSALAFWLVKLDAFFYCYV 979


>gi|297790668|ref|XP_002863219.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309053|gb|EFH39478.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1100

 Score = 1030 bits (2663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/1166 (50%), Positives = 753/1166 (64%), Gaps = 121/1166 (10%)

Query: 29   MEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSSKKLKGFHGRNRLGVVSAKIVK 88
            ME L  +L LT K+V  WF  +R R KG     + S ++  L    G N        I++
Sbjct: 1    MEDLGKSLGLTVKEVCGWFKRRRTRGKG-----VKSMANDGL----GANNPQSYDRSIMR 51

Query: 89   KQDSLIHNKHLSLMV---CNGTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSL 145
               S   ++ +   V   C+   +K N     Q LL S +IL K+FRKDGP LG EFD L
Sbjct: 52   SSTS---SRCVGAAVEERCSVGTRKANC----QTLLPSSHILAKIFRKDGPSLGFEFDHL 104

Query: 146  PSQAFFRSKDSINSCPPLQENQTAKRKRKVSIHDELDHQECCTNTDHVRKHGMGKGLMTA 205
            PS A  R    + +    Q+ Q   RKRK+S   +   Q+C      V KHG+GKGLMT 
Sbjct: 105  PSGA--RKASWLGTSSVDQQKQKVARKRKISELMDSTSQDCIKENGTVIKHGIGKGLMTV 162

Query: 206  WRVMNPNGGTVPTGIDVADRQVTVVPQMATPLSQKPPLRKKRAQQIVSLLKQRRLAN-NL 264
            WRVMNPN   V   +D+ D + T+ PQ +   ++ PP +KK+ +Q+ S+LKQ+ L   + 
Sbjct: 163  WRVMNPNRRDVSPCVDLLDERATL-PQSS---ARNPPHQKKKQRQLASILKQKLLQKKST 218

Query: 265  QSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELE 324
            + KR+ + +  ++  D+ +R     KE CELA +  + +E    I++LVDDEELE+RE +
Sbjct: 219  EKKRRSINREAELNKDETQR---AFKENCELAANGEVFKETCQTISILVDDEELEMRERQ 275

Query: 325  VGPNPPTCCDHISTKGLHGCSLCR-------DLLAKFPPNSVKMKQPFGTQPWDSSPETV 377
               NP  C  H  + G HGC LC+       DLL KFPPNSV+M+ PFG  PW+SSPE+V
Sbjct: 276  ERGNPLACSCHHPSSGSHGCFLCKGVFLLFLDLLPKFPPNSVQMRVPFGLHPWNSSPESV 335

Query: 378  KKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGR 437
            KKLFK                             DS+LLGKIH++LLKLLL DVE EL R
Sbjct: 336  KKLFK-----------------------------DSLLLGKIHLSLLKLLLLDVETELQR 366

Query: 438  GCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRK 497
            G   +LS+SCKFLALL SVE+Q   ++ W  SLN LTWTEILRQ+LVAAG+GS + + + 
Sbjct: 367  GSFSNLSISCKFLALLQSVESQILILDMWRDSLNSLTWTEILRQILVAAGYGSVKCAVQS 426

Query: 498  ESLSKE-------------------------------MILMLKYGLRPGTLKGELFRILL 526
            E LSK+                               M LM KYGLR GTLKGELFR+L 
Sbjct: 427  EDLSKQLACICFVLEGRSVTCGELKALTRFYFVIEIHMRLMKKYGLRLGTLKGELFRMLN 486

Query: 527  EQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINT- 585
            E+GNNG K+ +LA + ++A LN  +  EE E  I STL+SDITLFEKI+ STYR+R+N  
Sbjct: 487  EKGNNGLKISELANAPEVAVLNFATAPEERENSICSTLASDITLFEKISESTYRVRVNCF 546

Query: 586  SKEADDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSENQRQRRPKYLNCCKSENNMLTV 645
            S++ D  +SD+++ GSVDD SDD  + S+ D+ E  SEN   R+ K     K ++    V
Sbjct: 547  SEDPDKSQSDSDNSGSVDDESDDC-SISSGDEIEHVSENPALRKVKCRKRRKHKSKTQEV 605

Query: 646  YMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRMEDPTKAIAESV 705
              EIDESH G+ WL GLMEGEYSDL+I+EKL+  V LIDL+S+GS+IRMED  +A+ +  
Sbjct: 606  CSEIDESHPGEPWLLGLMEGEYSDLSIEEKLDVFVALIDLLSSGSTIRMEDLPRAMVDYA 665

Query: 706  PSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLDSFSLISKSCGK 765
            PS+  +G G KIKR+  NQ+S PR SWVH G+ HG++  + S + HP+DS S++      
Sbjct: 666  PSIYSHGFGGKIKRSSSNQYSYPRGSWVHGGELHGMKALSKSSDSHPVDSSSIV------ 719

Query: 766  EKSSSVKDAK-ATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSED 824
                 V  AK A + + ++HPMQS+YLGSDRR+NRYWLFLGPCN  DPGH+ V+FESSED
Sbjct: 720  -----VAFAKLAEDKANNIHPMQSVYLGSDRRFNRYWLFLGPCNANDPGHRCVFFESSED 774

Query: 825  GHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQS 884
            GHWEVI+ +EALRALLSVLDDRGR+EA LIESLEKRE+FLCQAM +  V  +E  H    
Sbjct: 775  GHWEVINNKEALRALLSVLDDRGRREARLIESLEKRESFLCQAMLNRQVTQSESAHFT-- 832

Query: 885  DQSELDLVREDSSSPVSDVDNNLALSEIGKESLPS-CGAIVLDVGKKGEEQHRMWSRLQE 943
                 D+VREDSSSPVSD+DNNL LSEI  +   S   AIV ++G K  E+  +WS LQE
Sbjct: 833  -----DIVREDSSSPVSDIDNNLCLSEIANDQFSSQHAAIVFEIGSK-REKSLLWSLLQE 886

Query: 944  FDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEER 1003
            FD WIW +F  NLNAVKH +RSYLD+L RC+ CHDLYWRDEKHCKICH TFE+D DLEER
Sbjct: 887  FDEWIWANFNFNLNAVKHRRRSYLDSLTRCKSCHDLYWRDEKHCKICHATFEVDIDLEER 946

Query: 1004 YAVHAATCRGKGD-HLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVK 1062
            YA+H ATCR K +   +  HK+LSSQLQSLKAAV+AIES MPEDAL+GAW KSAH+LW K
Sbjct: 947  YAIHTATCRRKEECDTIPDHKVLSSQLQSLKAAVYAIESAMPEDALIGAWRKSAHRLWAK 1006

Query: 1063 RLRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMGEIIAFFPTMPQTSSALALWL 1122
            RLRR+S+++E+ QV+ DFV AINE WL+  + Q   T+MGEII  FP+MPQT+SA+ALWL
Sbjct: 1007 RLRRSSTVSEITQVIGDFVGAINEDWLWHSSDQ-GQTLMGEIICCFPSMPQTTSAIALWL 1065

Query: 1123 VKLDAIIAPYLERVNSGKEDARMRCR 1148
            VKLD +I PY+E+    +     R R
Sbjct: 1066 VKLDTLIGPYVEKAQPERNQPLCRTR 1091


>gi|4586251|emb|CAB40992.1| putative protein [Arabidopsis thaliana]
 gi|7267976|emb|CAB78317.1| putative protein [Arabidopsis thaliana]
          Length = 1108

 Score = 1006 bits (2600), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/1177 (49%), Positives = 747/1177 (63%), Gaps = 135/1177 (11%)

Query: 29   MEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSSKKLKGFHGRNRLGVVSAKIVK 88
            ME L  +L LT K+VR WF  +R R KG   +                + LG  + ++  
Sbjct: 1    MEDLGKSLGLTLKEVRGWFKRRRSRGKGVKSM--------------ANDGLGAKNPQLYD 46

Query: 89   KQDSLIHNKHLSLMVCNGTGKKKNAVT-----VLQDLLTSDYILKKVFRKDGPPLGVEFD 143
            +  SL+ +   S   C G   ++  +        Q+LL S +IL KVFRKDGP LG EFD
Sbjct: 47   R--SLMRSSTSSR--CVGVAVEERCIVGTRKASCQNLLPSSHILAKVFRKDGPSLGSEFD 102

Query: 144  SLPSQAFFRSKDSINSCPPLQENQTAKRKRKVSIHDELDH--QECCTNTDHVRKHGMGKG 201
             LPS A  R    + +    Q+ Q   RKRK+S  + +DH  Q+C      V KHG+GKG
Sbjct: 103  HLPSGA--RKASWLGTSSVGQQKQKVARKRKIS--ELMDHTSQDCIQENATVMKHGIGKG 158

Query: 202  LMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATPLSQKPPLRKKRAQQIVSLLKQRRLA 261
            LMT WRVMNPN   V   +D+ D + T+ PQ +   ++ PP +KK+ +Q+ S+LKQ+ L 
Sbjct: 159  LMTVWRVMNPNRRDVSPCVDLLDERATL-PQSS---ARNPPHQKKKQRQLASILKQKLLQ 214

Query: 262  N-NLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELEL 320
              + + KR+ + +  + +L+K E  R+  KE CELA D  + +E    I+ LVDDEELE+
Sbjct: 215  KRSTEKKRRSIHR--EAELNKDETQRE-FKENCELAADGEVFKETCQTISTLVDDEELEM 271

Query: 321  RELEVGPNPPTCCDHISTKGLHGCSLCR--------------DLLAKFPPNSVKMKQPFG 366
            RE     NP TC  H  + G HGC LC+              DLL KFPPNSV+M+ PFG
Sbjct: 272  RERHERGNPLTCSCHHPSSGSHGCFLCKGIAMRSSDSSLLFPDLLPKFPPNSVQMRMPFG 331

Query: 367  TQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKL 426
              PW+SSPE+VKKLFK                             DS+LLGKIH++LLKL
Sbjct: 332  LHPWNSSPESVKKLFK-----------------------------DSLLLGKIHLSLLKL 362

Query: 427  LLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAA 486
            LL DVE EL RG   +LS+SCKFLALL SVE+Q   ++ W  SLN LTWTE+LRQ+LVAA
Sbjct: 363  LLLDVETELERGSFSNLSISCKFLALLQSVESQILILDMWRNSLNSLTWTELLRQILVAA 422

Query: 487  GFGSKQGSSRKESLSKE--------------------------------MILMLKYGLRP 514
            G+GS + + + E LSK+                                M LM KYGLR 
Sbjct: 423  GYGSLKCAVQSEELSKQLASTCFVLGDRSVICGELKALARLYFVIDDIHMKLMKKYGLRL 482

Query: 515  GTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKI 574
            GTLKGELFR+L  QGNNG K+ +LA + ++A LNL +  EE E  I STL+SDITLFEKI
Sbjct: 483  GTLKGELFRMLNGQGNNGLKISELADAPEVAVLNLATVPEERENSICSTLASDITLFEKI 542

Query: 575  ASSTYRLRINTSKEADDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSENQRQRRPKYLN 634
            + STYR+R+N   E  D      D     D+  DD + S+ D+ E  SEN   R+ K   
Sbjct: 543  SESTYRVRVNCFSEDPDKSQSDSDDSGSVDDESDDCSISSGDEIEHVSENPALRKVKCRK 602

Query: 635  CCKSENNMLTVYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRM 694
              K ++ M  V  EIDESH G+ WL GLMEGEYSDL+++EKL+  V LIDL+S+GS+IRM
Sbjct: 603  RRKHKSKMREVCSEIDESHPGEPWLLGLMEGEYSDLSVEEKLDVFVALIDLLSSGSTIRM 662

Query: 695  EDPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLD 754
            ED  +A+A+  PS+  +GSG KIKR+  NQ+S PR SWVH G+ +G++  + S + HP+D
Sbjct: 663  EDLPRAVADCAPSIYSHGSGGKIKRSSSNQYSYPRGSWVHGGELYGIKALSKSSDSHPVD 722

Query: 755  SFSLISKSCGKEKSSSVKDAK-ATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPG 813
            S S++              AK A   + ++HPMQS+YLGSDRR+NRYWLFLG CN  DPG
Sbjct: 723  SSSIVGAF-----------AKLAGNRANNVHPMQSVYLGSDRRFNRYWLFLGTCNANDPG 771

Query: 814  HKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLV 873
            H+ V+FESSEDGHWEVI+ +EALRALLSVLDDRGR+EA LIESLEKRE+FLCQAM S  V
Sbjct: 772  HRCVFFESSEDGHWEVINNKEALRALLSVLDDRGRREARLIESLEKRESFLCQAMLSRQV 831

Query: 874  NNTEIRHVAQSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLPS-CGAIVLDVGKKGE 932
              +E  H         D+VREDSSSPVSD+DNNL L+EI  +   S   AIV ++G K  
Sbjct: 832  TQSETAHFT-------DIVREDSSSPVSDIDNNLCLNEIANDQFSSQHAAIVFEIGSK-R 883

Query: 933  EQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHT 992
            E+  +WS +QEFD WIW +F  NLN+VKH +RSYLD+L RC+ CHDLYWRDEKHCKICH 
Sbjct: 884  EKSLLWSLIQEFDDWIWANFNFNLNSVKHRRRSYLDSLTRCKSCHDLYWRDEKHCKICHA 943

Query: 993  TFELDFDLEERYAVHAATCRGKGD-HLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGA 1051
            TFE+D DLEERYA+HAATC  K +      HK+LSSQLQSLKAAV+AIES MPEDAL+GA
Sbjct: 944  TFEVDIDLEERYAIHAATCMRKEECDTFPDHKVLSSQLQSLKAAVYAIESAMPEDALIGA 1003

Query: 1052 WTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMGEIIAFFPTM 1111
            W KSAH+LW KRLRR+SS++E+ QV+ DFV AINE WL+  + Q   T+MGEII  FP+M
Sbjct: 1004 WRKSAHRLWAKRLRRSSSVSEITQVIGDFVGAINEEWLWHCSDQ-GQTLMGEIINCFPSM 1062

Query: 1112 PQTSSALALWLVKLDAIIAPYLERVNSGKEDARMRCR 1148
            PQT+SA+ALWLVKLD +IAPY+E+    ++    R R
Sbjct: 1063 PQTTSAIALWLVKLDTLIAPYVEKAPPERDQPLCRTR 1099


>gi|357161878|ref|XP_003579233.1| PREDICTED: uncharacterized protein LOC100825161 [Brachypodium
            distachyon]
          Length = 1111

 Score =  890 bits (2301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 523/1145 (45%), Positives = 694/1145 (60%), Gaps = 79/1145 (6%)

Query: 5    RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGD---NGIV 61
            +K+PLQ + L  FYSE +YP   +M   A+++ L Y QVR WF E+RR+++      G +
Sbjct: 7    KKSPLQIQMLEGFYSEVQYPKPDDMIEYASSVGLAYSQVRIWFKERRRKERRQMEAAGAL 66

Query: 62   IPSSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKKNAVTVLQDLL 121
            + +  S +  G                +  SL+  KH                   Q L 
Sbjct: 67   METQVSARSNG---------------PRSMSLVGEKH---------------ALRPQVLY 96

Query: 122  TSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCPPLQENQTAKRKRKVSIHDEL 181
              DYIL KVFRKDGP LG EFD LP  A    +D+        ++Q   +KRK+    + 
Sbjct: 97   PKDYILAKVFRKDGPSLGSEFDPLPKSAHGHVRDTTEYHS--DQDQRVVKKRKIVECTDQ 154

Query: 182  DHQECCTNTDHVRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATPLSQKP 241
                 C +   VRKHGMGKGLMT W  M      V        + V+        L    
Sbjct: 155  GFTLPCQSNGPVRKHGMGKGLMTVWHAMYSKNAEV--------QDVSNFIDETGCLRSLR 206

Query: 242  PLRKKRAQQIVSLLKQRRLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVI 301
            P      + I      R+    +  K +P    ++V   +   L++    +C L+ D   
Sbjct: 207  PFDDSDGKLIQKFFLPRK---KVDKKSRPPPSKRKVPRGRVTVLKEHPAMECHLSVDESE 263

Query: 302  SQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKM 361
            S E   + A LVDDEELEL EL+ GPNP  C  H+S+ G HGC LC+DLLA+FPP SVKM
Sbjct: 264  SSELQTEQATLVDDEELELSELQAGPNPLRCSAHLSSSGRHGCPLCKDLLARFPPPSVKM 323

Query: 362  KQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHV 421
            K+PF T+PWDSSPE VKKLF+V  F+ T+ G +D+  FT DEFAQAFHDK+S LLGK+HV
Sbjct: 324  KEPFSTKPWDSSPEMVKKLFQVVRFVYTHFGSMDVHPFTFDEFAQAFHDKESSLLGKVHV 383

Query: 422  ALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQ 481
            +LLKLL+ + + + G    P  S   +F++ L+ V  QEF V FW KSLN LTW EILRQ
Sbjct: 384  SLLKLLMLNTKRDSGDVFVPRSSKDSRFISFLNFVREQEFDVNFWIKSLNSLTWVEILRQ 443

Query: 482  VLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLARS 541
            VLVA+GFGS      +   +KE   M+KYGLRP TLKGELF +L ++G  G KV +LA+S
Sbjct: 444  VLVASGFGSDHHMLNRNFFNKEKNQMVKYGLRPRTLKGELFALLSKKGIGGLKVSELAKS 503

Query: 542  SQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTS-KEADDFESDAEDIG 600
             QI +LNL S T EVE LI STLSSDITLFEKIASS YRLR++   K  ++ +SD ED G
Sbjct: 504  PQIVDLNL-SGTSEVEQLIFSTLSSDITLFEKIASSAYRLRVDPRIKGKENPKSDTEDSG 562

Query: 601  SVDDNSDDDDTCSNRDDSE----CNSENQRQRRPKYLNCCKSENNMLTVYMEIDESHRGD 656
            +VDD+ D   +    D  E       E++  RR +     K+E+  +    EIDES+ G+
Sbjct: 563  TVDDDEDASSSGDEYDGPEELSFSEHESRIVRRKQ-----KNEHKTMNKCSEIDESYSGE 617

Query: 657  VWLSGLMEGEYSDLTIDEKLNALVGLIDLVS-AGSSIRMEDPTKAIAESVPSVRHYGSGA 715
             WL GLMEGEYSDL+IDEKL+ LV L+D+VS AGS  R+E+P +++  ++   + + SG 
Sbjct: 618  RWLLGLMEGEYSDLSIDEKLDCLVALMDVVSGAGSVPRLEEP-QSVLSNIQRAQSHASGG 676

Query: 716  KIKRALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLDSFSLISKSCGKEKSSSVKDAK 775
            KIK++        R  +  + ++      N     H LD+ S+  +S  +     + ++ 
Sbjct: 677  KIKKST-------RTIYQSSDEY-----LNRPGSSHSLDT-SMQGQSGNRRSQDYISESA 723

Query: 776  ATEVSTDL-HPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEE 834
            A E ST   H  Q + LGSDRRYN YWLFLGPC   DPGH+RVYFESSEDGHWEVID+ +
Sbjct: 724  ANESSTAFAHQPQIVLLGSDRRYNNYWLFLGPCRADDPGHRRVYFESSEDGHWEVIDSPQ 783

Query: 835  ALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEI-----RHVAQSDQSEL 889
             L +LLS+LD RG +EA L+ S++KR+A L + M   L +   +        ++S+ S  
Sbjct: 784  ELLSLLSLLDIRGTREAHLLASMKKRQACLFEGMKKHLEDGNAVGVSASSDSSRSETSTP 843

Query: 890  DLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIW 949
             L   D +SP+SD+DN    + +    L +  AIV++ G++G+E+   W RLQ  D WIW
Sbjct: 844  KLSSGDGASPLSDIDNASVPTYLADNLLSASSAIVIEAGRRGDEKILKWERLQALDKWIW 903

Query: 950  NSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAA 1009
             SFY +L AVK GKRS+ ++L  CE CHDLYWRDEKHC+ICH+TFE+ FDLEERYA+H A
Sbjct: 904  TSFYSSLIAVKCGKRSFKESLVHCESCHDLYWRDEKHCRICHSTFEVGFDLEERYAIHVA 963

Query: 1010 TCRGKGD-HLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTS 1068
            TCR   D + V  HK+LSSQLQ+LKAA+HAIE+ MPE A  G W KS+H LWV+RLRRTS
Sbjct: 964  TCREPEDLYDVPNHKVLSSQLQALKAAIHAIEACMPESAFAGLWMKSSHNLWVRRLRRTS 1023

Query: 1069 SLAELLQVVADFVSAINEGWLYQWNVQIADTVMGEIIAFFPTMPQTSSALALWLVKLDAI 1128
            SL ELLQV+ DFV A++E WLY+ +     + +  I  +F TMPQT+SA+ALW+VKLDA+
Sbjct: 1024 SLPELLQVLVDFVGAMDEDWLYESSSTSFCSYLDNITVYFQTMPQTTSAVALWVVKLDAL 1083

Query: 1129 IAPYL 1133
            IAPYL
Sbjct: 1084 IAPYL 1088


>gi|218200030|gb|EEC82457.1| hypothetical protein OsI_26894 [Oryza sativa Indica Group]
          Length = 1173

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/1182 (45%), Positives = 718/1182 (60%), Gaps = 75/1182 (6%)

Query: 5    RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN---GIV 61
            +K+PLQ + L +FYSE +YP   ++   A ++ LTY QVR WF E+RR+++ +    G  
Sbjct: 22   KKSPLQIQMLERFYSEVQYPQSEDIAEYATSVGLTYNQVRIWFKERRRKERRETESLGAH 81

Query: 62   IPSSSSKKLKGFHGRNRLGVVSAKI-------VKKQDSLIHNKHLSLMVCNGTGKKKNAV 114
            +    S +  GF   +      ++        ++ +D    +K +S      TG+K    
Sbjct: 82   MEKQLSARSNGFRCSSSRSSSFSRSTMYRTVNLQPEDDRYVDKGMSF-----TGEKHTLR 136

Query: 115  TVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCPPLQENQTAKRKRK 174
            +  Q L   DYIL+KVFRKDGPPLG EFD LP  A    +D+ ++     +NQ   +KRK
Sbjct: 137  S--QVLFPKDYILRKVFRKDGPPLGSEFDPLPHSAPGHLRDTTDN--HFYQNQRVIKKRK 192

Query: 175  VSIHDELDHQECCTNTDHVRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMA 234
            +           C +   VRKHG GKGLMT W  M  +   +  G +  D       +  
Sbjct: 193  IVEPTTQRSSLPCGDNGPVRKHGAGKGLMTVWHAMYSHSSKIQDGSNFID-------ETG 245

Query: 235  TPLSQKPPLRKKRAQQI--VSLLKQRRLANNLQSKR-KPVAKGKQVKLDKGERLRQPNKE 291
               S +P     R +      L++++ LA     KR +P +  ++V      R+  P K 
Sbjct: 246  CLRSLRPLDDCGRIEDCDDGKLIQKKVLARKKVVKRTRPPSNKRKVP---SSRVTDPKKH 302

Query: 292  ---KCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCR 348
               +C L+ D   S         LVDDEELELREL+ GPNP  C  H+S+ G HGC LC+
Sbjct: 303  PPMECHLSVDESQSPVLQANQVTLVDDEELELRELQAGPNPLRCSAHLSSSGRHGCPLCK 362

Query: 349  DLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAF 408
            DLL++FPP+SVKMKQPF T+PW SSPE VKKLF+V  F+    G +D+  FTLDE AQAF
Sbjct: 363  DLLSRFPPSSVKMKQPFSTRPWGSSPEMVKKLFQVVRFIYNRFGYMDVHPFTLDELAQAF 422

Query: 409  HDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNK 468
            HDKDSMLLG++HV LLKLLL + E        P  S  C+FL+ ++ V  QEF + FW K
Sbjct: 423  HDKDSMLLGEVHVNLLKLLLLNTERGSNDVFVPRSSKDCRFLSFVNFVREQEFDMNFWIK 482

Query: 469  SLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQ 528
            SLN LTW EILRQVLVA+GFGSK     ++  +KE   M+KYGLRP TLKGELF +L ++
Sbjct: 483  SLNSLTWVEILRQVLVASGFGSKHHMLNRDFFNKEKNQMVKYGLRPRTLKGELFALLSKK 542

Query: 529  GNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTS-K 587
            G+ G KV +LA+S +I +L++ ST  E+E LI STLSSDITLFEKIA S YRLR++   K
Sbjct: 543  GSGGLKVSELAKSPEIVDLSISST--EIEQLIYSTLSSDITLFEKIAPSAYRLRVDPRIK 600

Query: 588  EADDFESDAEDIGSVDDNSDDDDTCSNRDDSE---CNSENQRQRRPKYLNCCKSENNMLT 644
              +D  SD ED GSVDD+SD        D S     +    R  R K+ N  ++ N    
Sbjct: 601  GKEDSGSDTEDSGSVDDHSDASSGADESDGSHEMSFSEHEHRILRRKWKNGHENVNRC-- 658

Query: 645  VYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVS-AGSSIRMEDPTKAIAE 703
               EIDES+ G+ WL GLMEGEYSDL+IDEKL+ LV L+D+VS A S+ R+E+P++ +  
Sbjct: 659  --SEIDESYSGERWLLGLMEGEYSDLSIDEKLDCLVALMDVVSGADSAPRLEEPSRVVP- 715

Query: 704  SVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLDSFSLISKSC 763
            S+P  + + SG KIK++  N        +  +G  +G+ +++   +   L S   ++ S 
Sbjct: 716  SIPRAQPHVSGGKIKKSTRNICQSSDECFNASGSMYGL-DSSMHEQSRSLRSRDYVAYSG 774

Query: 764  GKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSE 823
              + S+ V            H  Q + LGSDRRYN YWLFLGPC   DPGH+RVYFESSE
Sbjct: 775  RNDTSTGVA-----------HQPQVVLLGSDRRYNNYWLFLGPCRADDPGHRRVYFESSE 823

Query: 824  DGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQ 883
            DGHWEVID+ + L +LL+ LD RG +EA L+ S++KR+  L +AM     N   ++    
Sbjct: 824  DGHWEVIDSPQELLSLLASLDSRGTREAYLLASMKKRQTCLFEAMKKHYENRDAVQPAMP 883

Query: 884  SDQSELD----------LVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEE 933
            SD S  +          L   D +SP SD+DN    +   +  + +  AI ++VG++G+E
Sbjct: 884  SDTSHSETSSGDGASPKLSSGDGASPTSDIDNASVPTNPAENMINASSAIAIEVGRRGDE 943

Query: 934  QHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTT 993
            +   W R Q FD WIW SFY  L AVK GK+S+ ++L RCE CHDLYWRDEKHC+ICH+T
Sbjct: 944  KILKWERSQTFDKWIWTSFYSCLTAVKCGKKSFKESLVRCESCHDLYWRDEKHCRICHST 1003

Query: 994  FELDFDLEERYAVHAATCRGKGD-HLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAW 1052
            FE+ FDLEERYA+H ATCR   D + V  HK+L SQLQ+LKAA+HAIE+ MPE A  G W
Sbjct: 1004 FEVSFDLEERYAIHVATCRDPEDAYDVPNHKVLPSQLQALKAAIHAIEAHMPEAAFAGLW 1063

Query: 1053 TKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQ-WNVQIADTVMGEIIAFFPTM 1111
             KS+HKLWVKRLRRTSSLAELLQV+ DFV A++E WLY+  +     + + +I+ +F TM
Sbjct: 1064 MKSSHKLWVKRLRRTSSLAELLQVLVDFVGAMDEDWLYKSSSSVSFCSYLDDIVIYFQTM 1123

Query: 1112 PQTSSALALWLVKLDAIIAPYLERVNS----GKEDARMRCRG 1149
            PQT+SA+ALW+VKLDA+I PYLER +S    G+E  + R R 
Sbjct: 1124 PQTTSAVALWVVKLDALITPYLERADSDRALGEESVQTRTRA 1165


>gi|222637469|gb|EEE67601.1| hypothetical protein OsJ_25152 [Oryza sativa Japonica Group]
          Length = 1173

 Score =  889 bits (2296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/1185 (45%), Positives = 721/1185 (60%), Gaps = 81/1185 (6%)

Query: 5    RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN---GIV 61
            +K+PLQ + L +FYSE +YP   ++   A ++ LTY QVR WF E+RR+++ +    G  
Sbjct: 22   KKSPLQIQMLERFYSEVQYPQSEDIAEYATSVGLTYNQVRIWFKERRRKERRETESLGAH 81

Query: 62   IPSSSSKKLKGFHGRNRLGVVSAKI-------VKKQDSLIHNKHLSLMVCNGTGKKKNAV 114
            +    S +  GF   +      ++        ++ +D    +K +S      TG+K    
Sbjct: 82   MEKQLSARSNGFRCSSSRSSSFSRSTMYRTVNLQPEDDRYVDKGMSF-----TGEKHTLR 136

Query: 115  TVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCPPLQENQTAKRKRK 174
            +  Q L   DYIL+KVFRKDGPPLG EFD LP  A    +D+ +      +NQ   +KRK
Sbjct: 137  S--QVLFPKDYILRKVFRKDGPPLGSEFDPLPHSAPGHLRDTTDD--HFYQNQRVIKKRK 192

Query: 175  VSIHDELDHQECCTNTDHVRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMA 234
            +           C +   VRKHG GKGLMT W  M  +   +  G +  D       +  
Sbjct: 193  IVEPTTQRSSLPCGDNGPVRKHGAGKGLMTVWHAMYSHSSKIQDGSNFID-------ETG 245

Query: 235  TPLSQKPPLRKKRAQQI--VSLLKQRRLANNLQSKR-KPVAKGKQVKLDKGERLRQPNKE 291
               S +P     R +      L++++ LA     KR +P +  ++V      R+  P K 
Sbjct: 246  CLRSLRPLDDCGRIEDCDDGKLIQKKVLARKKVVKRTRPPSNKRKVP---SSRVTDPKKH 302

Query: 292  ---KCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCR 348
               +C L+ D   S         LVDDEELELREL+ GPNP  C  H+S+ G HGC LC+
Sbjct: 303  PPMECHLSVDESQSPVLQANQVTLVDDEELELRELQAGPNPLRCSAHLSSSGRHGCPLCK 362

Query: 349  DLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAF 408
            DLL++FPP+SVKMKQPF T+PW SSPE VKKLF+V  F+    G +D+  FTLDE AQAF
Sbjct: 363  DLLSRFPPSSVKMKQPFSTRPWGSSPEMVKKLFQVVRFIYNRFGYMDVHPFTLDELAQAF 422

Query: 409  HDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNK 468
            HDKDSMLLG++HV LLKLLL + E        P  S  C+FL+ ++ V  QEF + FW K
Sbjct: 423  HDKDSMLLGEVHVNLLKLLLLNTERGSNDVFVPRSSKDCRFLSFVNFVREQEFDMNFWIK 482

Query: 469  SLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQ 528
            SLN LTW EILRQVLVA+GFGSK     ++  +KE   M+KYGLRP TLKGELF +L ++
Sbjct: 483  SLNSLTWVEILRQVLVASGFGSKHHMLNRDFFNKEKNQMVKYGLRPRTLKGELFALLSKK 542

Query: 529  GNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTS-K 587
            G+ G KV +LA+S +I +L++ ST  E+E LI STLSSDITLFEKIA S YRLR++   K
Sbjct: 543  GSGGLKVSELAKSPEIVDLSISST--EIEQLIYSTLSSDITLFEKIAPSAYRLRVDPRIK 600

Query: 588  EADDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSE------NQRQRRPKYLNCCKSENN 641
              +D  SD ED GSVDD+S   D  S  D+S+ + E        R  R K+ N  ++ N 
Sbjct: 601  GKEDSGSDTEDSGSVDDHS---DASSGADESDGSHEMSFSEHEHRILRRKWKNGHENVNR 657

Query: 642  MLTVYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVS-AGSSIRMEDPTKA 700
                  EIDES+ G+ WL GLMEGEYSDL+IDEKL+ LV L+D+VS A S+ R+E+P++ 
Sbjct: 658  C----SEIDESYSGERWLLGLMEGEYSDLSIDEKLDCLVALMDVVSGADSAPRLEEPSRV 713

Query: 701  IAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLDSFSLIS 760
            +  S+P  + + SG KIK++  N        +  +G  +G+ +++   +   L S   ++
Sbjct: 714  VP-SIPRAQPHVSGGKIKKSTRNICQSSDECFNASGSMYGL-DSSMHEQSRSLRSRDYVA 771

Query: 761  KSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFE 820
             S   + S+ V            H  Q + LGSDRRYN YWLFLGPC   DPGH+RVYFE
Sbjct: 772  YSGRNDTSTGVA-----------HQPQVVLLGSDRRYNNYWLFLGPCRADDPGHRRVYFE 820

Query: 821  SSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRH 880
            SSEDGHWEVID+ + L +LL+ LD RG +EA L+ S++KR+  L +AM     N   ++ 
Sbjct: 821  SSEDGHWEVIDSPQELLSLLASLDSRGTREAYLLASMKKRQTCLFEAMKKHYENRDAVQP 880

Query: 881  VAQSDQSELD----------LVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKK 930
               SD S  +          L   D +SP SD+DN    +   +  + +  AI ++VG++
Sbjct: 881  AMPSDTSHSETSSGDGASPKLSSGDGASPTSDIDNASVPTNPAENMINASSAIAIEVGRR 940

Query: 931  GEEQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKIC 990
            G+E+   W R Q FD WIW SFY  L AVK GK+S+ ++L RCE CHDLYWRDEKHC+IC
Sbjct: 941  GDEKILKWERSQTFDKWIWTSFYSCLTAVKCGKKSFKESLVRCESCHDLYWRDEKHCRIC 1000

Query: 991  HTTFELDFDLEERYAVHAATCRGKGD-HLVSKHKILSSQLQSLKAAVHAIESVMPEDALV 1049
            H+TFE+ FDLEERYA+H ATCR   D + V  HK+L SQLQ+LKAA+HAIE+ MPE A  
Sbjct: 1001 HSTFEVSFDLEERYAIHVATCRDPEDVYDVPNHKVLPSQLQALKAAIHAIEAHMPEAAFA 1060

Query: 1050 GAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQ-WNVQIADTVMGEIIAFF 1108
            G W KS+HKLWVKRLRRTSSLAELLQV+ DFV A++E WLY+  +     + + +I+ +F
Sbjct: 1061 GLWMKSSHKLWVKRLRRTSSLAELLQVLVDFVGAMDEDWLYKSSSSVSFCSYLDDIVIYF 1120

Query: 1109 PTMPQTSSALALWLVKLDAIIAPYLERVNS----GKEDARMRCRG 1149
             TMPQT+SA+ALW+VKLDA+I PYLER +S    G+E  + R R 
Sbjct: 1121 QTMPQTTSAVALWVVKLDALITPYLERADSDRALGEESVQTRTRA 1165


>gi|449522195|ref|XP_004168113.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101224723,
            partial [Cucumis sativus]
          Length = 760

 Score =  874 bits (2259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/760 (60%), Positives = 562/760 (73%), Gaps = 19/760 (2%)

Query: 383  VFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPH 442
            VF+FLCTYA  + +CSFTLDEFA++FHDK+S LLGK+HVALLKLL  D+E E        
Sbjct: 1    VFNFLCTYATTLGVCSFTLDEFAESFHDKNSFLLGKVHVALLKLLFCDIEAEFSNAYLTP 60

Query: 443  LSVSCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSK 502
            LS SCKFLAL+HS+ +++F +E W KSLNPLTWTEILRQVLVAAGF SKQ + +KE+LSK
Sbjct: 61   LSKSCKFLALVHSLGSKDFALEVWKKSLNPLTWTEILRQVLVAAGFCSKQDALQKETLSK 120

Query: 503  EMILMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISS 562
            EM L+ KYGL+ GTLKGELF IL EQGNNG KV  L R S+I +LN+  TTEE+EL I S
Sbjct: 121  EMDLVSKYGLQRGTLKGELFIILSEQGNNGIKVSDLIRESKIVDLNVAGTTEELELQICS 180

Query: 563  TLSSDITLFEKIASSTYRLRINTS-KEADDFESDAEDIGSVDDNSDDDDTCSNRDDSECN 621
            TLSSDITLFEKI+SS YRLR + +  + D+F+SD  D GSVDD +     CS+  DSEC+
Sbjct: 181  TLSSDITLFEKISSSAYRLRPSPAIMDVDEFQSDT-DFGSVDDIAASASICSSSYDSECD 239

Query: 622  SENQRQRRPKYLNCCKSENNMLTVYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVG 681
            SE    +R K     KS+N   TV  EID SH G+ WL GLME EYS L+I+EKLNALV 
Sbjct: 240  SEKLCAQRFKIQ---KSKNENPTVSTEIDVSHPGEAWLLGLMEDEYSGLSIEEKLNALVA 296

Query: 682  LIDLVSAGSSIRMEDPTKA--IAESVPSVRHYGSGAKIKRALPNQHSLPRPSWV-HAGDF 738
            LIDL+S GSSIR +  + +  I +   +++HYGSGAKIK++    H+L   S++  +G  
Sbjct: 297  LIDLLSDGSSIRPKGSSTSCGIVDYASNIQHYGSGAKIKKSSVRGHNLSSRSFLASSGQL 356

Query: 739  HGVRETNTSRELHPLDSFSLISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYN 798
                    S E HP+DS + ISK   +   S VK A   + +  LH MQSI+LGSDRRYN
Sbjct: 357  RSASIRYASLENHPIDSATAISK-FQENSGSQVKGADKMKNAIYLHSMQSIFLGSDRRYN 415

Query: 799  RYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLE 858
            RY LFLGPC+  DPGH+RVYFESSEDGHWEVIDT+EAL ALLSVLDDRG++EA LIESLE
Sbjct: 416  RYXLFLGPCDATDPGHRRVYFESSEDGHWEVIDTKEALCALLSVLDDRGKREAFLIESLE 475

Query: 859  KREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLP 918
            KR  FLC+AMS+    N   R   QS+QS++D +RE S SPVSDVDN+L  +E   ++LP
Sbjct: 476  KRVVFLCEAMSNKSTRNLVSRSFTQSEQSDMDRIRESSYSPVSDVDNSLYQAETTGDTLP 535

Query: 919  SCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHD 978
                IVL+V +KGEE+ + W+RLQ FD+W+WN FY  L AV+HG+RSYLD+LARCE CHD
Sbjct: 536  LSSTIVLEVKRKGEEEKQSWNRLQAFDSWVWNFFYHALYAVRHGRRSYLDSLARCECCHD 595

Query: 979  LYWRDEKHCKICHTTFELDFDLEERYAVHAATCRGKG-DHLVSKHKILSSQLQSLKAAVH 1037
            LYWRDEKHCK+CH TFELD +LEERY +H ATCR KG D++  KHK+LSSQLQ+LKA VH
Sbjct: 596  LYWRDEKHCKVCHITFELDLNLEERYTIHRATCREKGDDNVFPKHKVLSSQLQALKAGVH 655

Query: 1038 AIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQW----N 1093
            AIES+MPE A++GAWTKSAHKLW+KRLRRTSS+AEL+QVVADFV AINE W        +
Sbjct: 656  AIESIMPEGAMIGAWTKSAHKLWIKRLRRTSSMAELMQVVADFVGAINEDWFCNLPEDSS 715

Query: 1094 VQIADTVMGEIIAFFPTMPQTSSALALWLVKLDAIIAPYL 1133
            V I DT     +A F ++PQT+SALA WLVKLDA    Y+
Sbjct: 716  VCILDT-----LASFASLPQTTSALAFWLVKLDAFFYCYV 750


>gi|326532498|dbj|BAK05178.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1088

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/998 (46%), Positives = 611/998 (61%), Gaps = 55/998 (5%)

Query: 165  ENQTAKRKRKVSIHDELDHQECCTNTDHVRKHGMGKGLMTAWRVMNPNGGTVPTGIDVAD 224
            ++Q+  +KRK+             N D +R+HG GKGLMT W  M               
Sbjct: 112  QDQSVLKKRKIMSPTARRSTLPFENNDPMRRHGKGKGLMTVWHAMY-------------- 157

Query: 225  RQVTVVPQMATPLSQKPPLRKKRA-----QQIVSLLKQRRLANNLQSKRKPVAKGKQVKL 279
             Q   +   ++ + +   LR  R      +++  + +Q      +  K +P    ++V  
Sbjct: 158  SQTAEIQDCSSFIDESGCLRSLRPFEDCDRKLAQVQRQTLPRKKVNKKSRPPPSKRKVPC 217

Query: 280  DKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTK 339
             +   L +    +C L+ D   S E   + A LVDDEELEL EL+ GPNP  C  H+S+ 
Sbjct: 218  GRVTDLTEHPPVECHLSVDESESSELRTEQATLVDDEELELSELQAGPNPLRCSAHLSST 277

Query: 340  GLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSF 399
            G HGC LC+DLLA+FPP  V+MKQPF T+PW+SSPE VKKLF+V  F+ T+ G +D+  F
Sbjct: 278  GRHGCPLCKDLLARFPPPGVRMKQPFPTKPWESSPEMVKKLFQVVRFVYTHFGSMDVHPF 337

Query: 400  TLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQ 459
            T DEFAQAFHDKDS LLGK+HV+LLKLL+ + E   G    P  S   +FL+ L+ V  Q
Sbjct: 338  TFDEFAQAFHDKDSSLLGKVHVSLLKLLMLNTERGSGSVFVPRSSKDSRFLSFLNFVREQ 397

Query: 460  EFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKG 519
            EF V FW KSLN LTW EILRQVLVA+GFGS      +   +KE   M+KYGLRP TLKG
Sbjct: 398  EFDVNFWIKSLNSLTWVEILRQVLVASGFGSDHHILNRNFFNKEKNQMVKYGLRPRTLKG 457

Query: 520  ELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTY 579
            ELF +L ++G+ G KV +LA+S QI +LNL S   EVE LI STLS DITLFEKIA S Y
Sbjct: 458  ELFELLSKKGSGGLKVAELAKSPQIIDLNL-SGASEVEQLIFSTLSGDITLFEKIAPSAY 516

Query: 580  RLRINTS-KEADDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSENQRQR--RPKYLNCC 636
            RLR++   K  +D  SD ED G+VDD  D   +    D  + +      R  R K  N  
Sbjct: 517  RLRVDPRIKGKEDPRSDTEDSGTVDDGGDASSSGDESDGPQESYPEHESRIVRWKQKNIH 576

Query: 637  KSENNMLTVYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVS-AGSSIRME 695
            K+ N       EIDES+ G+ WL GLMEGEYSDL+IDEKL+ LV LID+VS AGS  R+E
Sbjct: 577  KNMNKC----SEIDESYSGERWLLGLMEGEYSDLSIDEKLDCLVALIDVVSGAGSVPRLE 632

Query: 696  DPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLDS 755
            +P +++  ++   + + SG KIK++        R  +  + ++      N     H  DS
Sbjct: 633  EP-QSVLSNIQRAQSHASGGKIKKST-------RTIYQSSDEY-----LNRPGSSHSFDS 679

Query: 756  FSLISKSCGKEKSSSVKDAKATEVSTDL-HPMQSIYLGSDRRYNRYWLFLGPCNEYDPGH 814
             S+  +S        + D+ A E  T   H  Q + LGSDRRYN YWLFLGPC   DPGH
Sbjct: 680  -SMQGQSGSLRGQDYIADSGANESPTRFAHQPQIVLLGSDRRYNNYWLFLGPCRADDPGH 738

Query: 815  KRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVN 874
            +RVYFESSEDGHWEVID+ + L +LLSVLD RG +EA L+  ++KR++ L + M   L +
Sbjct: 739  RRVYFESSEDGHWEVIDSPQDLLSLLSVLDIRGTREAHLLAPMKKRQSCLFEGMKKHLED 798

Query: 875  NTEIRHVA----------QSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIV 924
               +   A            ++        D +SP+SD+D+    + +      +  AI 
Sbjct: 799  GCVVALTASSDSSRSETSSGNRYSPKPSSGDGASPLSDIDSASVPTYLAGNLQNASSAIG 858

Query: 925  LDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDE 984
            ++VG++ +E+   W RLQ  D WIW SFY +L AVK GKRS+ ++L  CE CHDLYWRDE
Sbjct: 859  IEVGRRSDEKMSKWERLQALDKWIWTSFYSSLTAVKCGKRSFKESLVHCESCHDLYWRDE 918

Query: 985  KHCKICHTTFELDFDLEERYAVHAATCRGKGD-HLVSKHKILSSQLQSLKAAVHAIESVM 1043
            +HC+ICH+TFE+ FDLEERYA+H ATCR   D + V  HK+L SQLQ+LKAA+HAIE+ M
Sbjct: 919  RHCRICHSTFEVGFDLEERYAIHVATCREPEDLYDVPNHKVLPSQLQALKAAIHAIEARM 978

Query: 1044 PEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQ-WNVQIADTVMG 1102
            P  A  G W KS+H LWVKRLRRTSSL ELLQV+ DFV AI+E WLYQ  +     + + 
Sbjct: 979  PTAAFAGLWMKSSHNLWVKRLRRTSSLPELLQVLVDFVGAIDEDWLYQSSSAVSFSSYLD 1038

Query: 1103 EIIAFFPTMPQTSSALALWLVKLDAIIAPYLERVNSGK 1140
            +II +F TMPQT+SA+ALW+VKLDA+IAP+L + +SG+
Sbjct: 1039 DIIVYFQTMPQTTSAVALWVVKLDALIAPHLAQADSGR 1076



 Score = 47.0 bits (110), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 29/43 (67%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWF 47
          +K+PLQ + L  FYSE +YP   ++   AA++ LT+ QVR WF
Sbjct: 16 KKSPLQIQMLESFYSEVQYPKPEDVTEYAASVGLTHNQVRIWF 58


>gi|147843753|emb|CAN81987.1| hypothetical protein VITISV_000722 [Vitis vinifera]
          Length = 1500

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/683 (62%), Positives = 511/683 (74%), Gaps = 41/683 (6%)

Query: 502  KEMILMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLIS 561
            KE+  M+KYGLRPGTLKGELF IL  QGNNG KV  LAR  QI+ELNL  TT+E+ELLI 
Sbjct: 739  KELNPMVKYGLRPGTLKGELFSILSNQGNNGMKVPDLARCVQISELNLAGTTDELELLIY 798

Query: 562  STLSSDITLFEKIASSTYRLRINT-SKEADDFESDAEDIGSVDDNSDDDDTCSNRDDSEC 620
            STLSSDITL+EKI+SS+YRLRI + + EA++F+SD +D GS+DD+S D    S+ DDS+ 
Sbjct: 799  STLSSDITLYEKISSSSYRLRITSHTNEAENFQSDTDDSGSIDDDSKDSRKYSSSDDSDS 858

Query: 621  NSENQRQRRPKYLNCCKSENNMLTVYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALV 680
            +S      +  Y+N  K  N MLT+Y EIDES+ G+VWL GLMEGEYSDL+I+EKLNAL+
Sbjct: 859  DSGTSNLGKLNYMNHHKQRNGMLTIYTEIDESNPGEVWLLGLMEGEYSDLSIEEKLNALM 918

Query: 681  GLIDLVSAGSSIRME-------------------------------------DPTKAIAE 703
             L+DLVS GSSIRME                                     D TKA+ E
Sbjct: 919  ALVDLVSGGSSIRMEPNFERCFLGNPSERALADSYKIMGWGIRAFLEGSDFKDLTKAVVE 978

Query: 704  SVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLDSFSLISKSC 763
             VP++ HYGSGAKIKR+   QH+LP P+  H G   G +E N S EL P+DS + ISK  
Sbjct: 979  YVPNIHHYGSGAKIKRSYTKQHNLPTPARGHFGQMLGGKEINPSSELCPVDSSTSISKFH 1038

Query: 764  GKEK-SSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESS 822
            GKEK SS  K+ +  EV  DLHPMQS++LG DRRYNRYWLFLGPCN  DPGHKRVYFESS
Sbjct: 1039 GKEKFSSKRKETREAEVGLDLHPMQSVFLGPDRRYNRYWLFLGPCNANDPGHKRVYFESS 1098

Query: 823  EDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVA 882
            EDGHWEVIDTEEA  ALLSVLD RG++EA L+ SLEKR+A LCQ MSS +  ++    + 
Sbjct: 1099 EDGHWEVIDTEEAFCALLSVLDGRGKREAFLLASLEKRKASLCQEMSSRIAIHSGSTSLT 1158

Query: 883  QSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQ 942
            Q D+S+L ++REDSSSPVSD+ +N   ++I  + L S GAIVL VGKKGEEQ + W RLQ
Sbjct: 1159 QYDRSDLYMIREDSSSPVSDIVDNPCATDITNDFLASSGAIVLGVGKKGEEQKQRWRRLQ 1218

Query: 943  EFDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEE 1002
            EFDAWIW+SFY +LNAVKHGKR+YLD+LARCE CHDLYWRDEKHCK CHTTFELDFDLEE
Sbjct: 1219 EFDAWIWSSFYSDLNAVKHGKRTYLDSLARCESCHDLYWRDEKHCKTCHTTFELDFDLEE 1278

Query: 1003 RYAVHAATCRGKGDH-LVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWV 1061
            +YA+H ATCR K D+ +  KHK+LSSQLQSLKAA+HAIESVMPEDALV AW+KSAHKLWV
Sbjct: 1279 KYAIHIATCREKEDNDMFPKHKVLSSQLQSLKAAIHAIESVMPEDALVEAWSKSAHKLWV 1338

Query: 1062 KRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQI-ADTVMGEIIAFFPTMPQTSSALAL 1120
            +RLRRTS L ELLQV+ADFV AI E WL Q +V + ++ ++ EI+  F TMPQTSSA+AL
Sbjct: 1339 RRLRRTSYLTELLQVLADFVGAIKEDWLCQSDVVLGSNNLLEEIVVSFSTMPQTSSAVAL 1398

Query: 1121 WLVKLDAIIAPYLERVNSGKEDA 1143
            WLVKLDA+IAP+LER+   K ++
Sbjct: 1399 WLVKLDALIAPHLERIRGSKNNS 1421



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/171 (48%), Positives = 102/171 (59%), Gaps = 47/171 (27%)

Query: 382 KVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPP 441
           KV HFL TY+ +VD+C FTLDEFAQAFHD+DS+LLGK+H+ALL LLLSDVE EL  G  P
Sbjct: 506 KVLHFLYTYSVVVDVCPFTLDEFAQAFHDEDSLLLGKVHLALLNLLLSDVETELSSGFLP 565

Query: 442 HLSVSCKFLALLHS---------------------------------------------- 455
           H+  +CKFL LL S                                              
Sbjct: 566 HVIKNCKFLGLLQSESYDIRVGMSDGGSKEPLHVLQHEAYLTFALITEDDVRTNALQGWI 625

Query: 456 -VENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMI 505
            V   EF ++FW +SLNPLTWTEILRQVLVAAGFGS++G+ R+E+L K+ +
Sbjct: 626 LVGQNEFVLKFWKRSLNPLTWTEILRQVLVAAGFGSRKGTLRREALDKKYV 676


>gi|33146626|dbj|BAC79914.1| homeobox transcription factor Hox7-like protein [Oryza sativa
            Japonica Group]
 gi|33146880|dbj|BAC79878.1| homeobox transcription factor Hox7-like protein [Oryza sativa
            Japonica Group]
          Length = 706

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 347/698 (49%), Positives = 460/698 (65%), Gaps = 42/698 (6%)

Query: 463  VEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELF 522
            + FW KSLN LTW EILRQVLVA+GFGSK     ++  +KE   M+KYGLRP TLKGELF
Sbjct: 1    MNFWIKSLNSLTWVEILRQVLVASGFGSKHHMLNRDFFNKEKNQMVKYGLRPRTLKGELF 60

Query: 523  RILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLR 582
             +L ++G+ G KV +LA+S +I +L++ ST  E+E LI STLSSDITLFEKIA S YRLR
Sbjct: 61   ALLSKKGSGGLKVSELAKSPEIVDLSISST--EIEQLIYSTLSSDITLFEKIAPSAYRLR 118

Query: 583  INTS-KEADDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSE------NQRQRRPKYLNC 635
            ++   K  +D  SD ED GSVDD+SD     S  D+S+ + E        R  R K+ N 
Sbjct: 119  VDPRIKGKEDSGSDTEDSGSVDDHSD---ASSGADESDGSHEMSFSEHEHRILRRKWKNG 175

Query: 636  CKSENNMLTVYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVS-AGSSIRM 694
             ++ N       EIDES+ G+ WL GLMEGEYSDL+IDEKL+ LV L+D+VS A S+ R+
Sbjct: 176  HENVNRC----SEIDESYSGERWLLGLMEGEYSDLSIDEKLDCLVALMDVVSGADSAPRL 231

Query: 695  EDPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLD 754
            E+P++ +  S+P  + + SG KIK++  N        +  +G  +G+ +++   +   L 
Sbjct: 232  EEPSRVVP-SIPRAQPHVSGGKIKKSTRNICQSSDECFNASGSMYGL-DSSMHEQSRSLR 289

Query: 755  SFSLISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGH 814
            S   ++ S   + S+ V            H  Q + LGSDRRYN YWLFLGPC   DPGH
Sbjct: 290  SRDYVAYSGRNDTSTGVA-----------HQPQVVLLGSDRRYNNYWLFLGPCRADDPGH 338

Query: 815  KRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVN 874
            +RVYFESSEDGHWEVID+ + L +LL+ LD RG +EA L+ S++KR+  L +AM     N
Sbjct: 339  RRVYFESSEDGHWEVIDSPQELLSLLASLDSRGTREAYLLASMKKRQTCLFEAMKKHYEN 398

Query: 875  NTEIRHVAQSDQSELD----------LVREDSSSPVSDVDNNLALSEIGKESLPSCGAIV 924
               ++    SD S  +          L   D +SP SD+DN    +   +  + +  AI 
Sbjct: 399  RDAVQPAMPSDTSHSETSSGDGASPKLSSGDGASPTSDIDNASVPTNPAENMINASSAIA 458

Query: 925  LDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDE 984
            ++VG++G+E+   W R Q FD WIW SFY  L AVK GK+S+ ++L RCE CHDLYWRDE
Sbjct: 459  IEVGRRGDEKILKWERSQTFDKWIWTSFYSCLTAVKCGKKSFKESLVRCESCHDLYWRDE 518

Query: 985  KHCKICHTTFELDFDLEERYAVHAATCRGKGD-HLVSKHKILSSQLQSLKAAVHAIESVM 1043
            KHC+ICH+TFE+ FDLEERYA+H ATCR   D + V  HK+L SQLQ+LKAA+HAIE+ M
Sbjct: 519  KHCRICHSTFEVSFDLEERYAIHVATCRDPEDVYDVPNHKVLPSQLQALKAAIHAIEAHM 578

Query: 1044 PEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQ-WNVQIADTVMG 1102
            PE A  G W KS+HKLWVKRLRRTSSLAELLQV+ DFV A++E WLY+  +     + + 
Sbjct: 579  PEAAFAGLWMKSSHKLWVKRLRRTSSLAELLQVLVDFVGAMDEDWLYKSSSSVSFCSYLD 638

Query: 1103 EIIAFFPTMPQTSSALALWLVKLDAIIAPYLERVNSGK 1140
            +I+ +F TMPQT+SA+ALW+VKLDA+I PYLER +S +
Sbjct: 639  DIVIYFQTMPQTTSAVALWVVKLDALITPYLERADSDR 676


>gi|242032619|ref|XP_002463704.1| hypothetical protein SORBIDRAFT_01g004566 [Sorghum bicolor]
 gi|241917558|gb|EER90702.1| hypothetical protein SORBIDRAFT_01g004566 [Sorghum bicolor]
          Length = 686

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 317/651 (48%), Positives = 405/651 (62%), Gaps = 42/651 (6%)

Query: 507  MLKYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSS 566
            M+KYGLRP TLKGELF +L + G+ G KV  LA+SS+I +LN+ S  E +E LIS  LSS
Sbjct: 3    MVKYGLRPRTLKGELFALLSKAGSCGLKVSVLAKSSEIIDLNVSSPLE-LEQLISLALSS 61

Query: 567  DITLFEKIASSTYRLRINTSKEADDFESDAEDIGSVDDNSDDDDTCSNRDDSECN---SE 623
            DITLFEKIA S YRLR++   +    E D+        + DDD+  S  DD        E
Sbjct: 62   DITLFEKIAPSAYRLRVDPQIKG---EEDSILDSDDSGSVDDDEDTSRSDDGSQKFKFPE 118

Query: 624  NQ-RQRRPKYLNCCKSENNMLTVYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGL 682
            N+ R  R K  N  +S N       EIDES+ G+ WL  LMEGEYSDL+IDEKL+ LV L
Sbjct: 119  NESRLARRKEKNAHESPNKC----SEIDESYSGERWLLALMEGEYSDLSIDEKLDCLVAL 174

Query: 683  IDLVS-AGSSIRMEDPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGV 741
            ID+VS AGS  R+E+P + +  +VP V    SG KIK+   N       S   +G     
Sbjct: 175  IDVVSGAGSVPRLEEPQRVL-HNVPRVHPPQSGGKIKKLTKNLCQYSDESLNGSGSLDCC 233

Query: 742  RETNTSRELHPLDSFSLISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYW 801
             +    R                ++      D    ++    H  Q + LGSDRRYN YW
Sbjct: 234  HQGRPGR----------------RKNQDYTADPGRNDLPVAAHEPQVVLLGSDRRYNSYW 277

Query: 802  LFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKRE 861
            LFLGPC E DPGH+RVYFESSEDGHWEVID+ + L +LLSVLD RG +EA L+ S+EKR+
Sbjct: 278  LFLGPCREDDPGHRRVYFESSEDGHWEVIDSPQELLSLLSVLDSRGTREAHLLTSMEKRQ 337

Query: 862  AFLCQAMSSGLVNNTEIR----------HVAQSDQSELDLVREDSSSPVSDVDNNLALSE 911
            A L +AM   +      R            +  D +       D +SPVSD++N    + 
Sbjct: 338  ACLFEAMKKHVEGGKAARLPAPFDSYCSQTSSGDGASPKTSSVDGASPVSDIENTAVPTC 397

Query: 912  IGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLDALA 971
            +   +  S  AIV++ G++G+E+  MW RLQ FD WIW SFY  L AVK GK+S+ ++L 
Sbjct: 398  LKDSNFDSSSAIVIESGRRGDEKISMWERLQAFDKWIWTSFYSILTAVKSGKKSFKESLV 457

Query: 972  RCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCR-GKGDHLVSKHKILSSQLQ 1030
             CE CHDLYWRDEKHC+ICH+TFE+ FDLEE+YAVH ATCR  +  H V  HK L SQLQ
Sbjct: 458  HCESCHDLYWRDEKHCRICHSTFEVGFDLEEKYAVHVATCREPELSHEVPNHKFLPSQLQ 517

Query: 1031 SLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLY 1090
            +LKAA+HAIE+ MPE A  G+W KSAHKLWVKRLRRTSSL ELLQV+ DFV A++  WLY
Sbjct: 518  ALKAAIHAIEASMPEAAFTGSWMKSAHKLWVKRLRRTSSLPELLQVLVDFVGAMDVDWLY 577

Query: 1091 QWNVQIA-DTVMGEIIAFFPTMPQTSSALALWLVKLDAIIAPYLERVNSGK 1140
            + +      T + +II +F TMPQT+SA+ALW+V+LDA++APYL++    K
Sbjct: 578  KSSSSTRFRTYLDDIIVYFQTMPQTTSAVALWVVQLDALVAPYLDKAMDSK 628


>gi|414873455|tpg|DAA52012.1| TPA: hypothetical protein ZEAMMB73_387581 [Zea mays]
          Length = 458

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/466 (48%), Positives = 291/466 (62%), Gaps = 30/466 (6%)

Query: 680  VGLIDLVSAGSSIRMEDPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFH 739
            +G+ D  SA S  + ++P + +  +VP V    SG KIK++  N       S   +G   
Sbjct: 1    MGVFD--SAASCEKADEPQRVL-HNVPRVHPPQSGGKIKKSTKNLCQYSDESLNGSGSLD 57

Query: 740  GVRETNTSRELHPLDSFSLISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNR 799
               +  + R                ++      D    ++    H  Q + LGSDRRYN 
Sbjct: 58   CCHQGQSGR----------------RKNQDYTTDPGRNDLPIAAHGPQVVLLGSDRRYNS 101

Query: 800  YWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEK 859
            YWLFLGPC E DPGH+RVYFESSEDGHWEVID+ + L +LLS+LD RG +EA L+ S+EK
Sbjct: 102  YWLFLGPCREDDPGHRRVYFESSEDGHWEVIDSPQELLSLLSILDSRGTREAHLLTSMEK 161

Query: 860  REAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSP----------VSDVDNNLAL 909
            R+A L +AM   +      R  A SD         D +SP          VSD++N    
Sbjct: 162  RQACLFEAMKKHVEGGKAARLPASSDSYCSQTSSGDGTSPKTSSVDGASSVSDIENTSVP 221

Query: 910  SEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLDA 969
            + +   +L S  A+V++ G+ G+E+  MW RLQ FD WIW SFY  L AVK GK+S+ ++
Sbjct: 222  TSLKDSNLDSSSAVVIESGRGGDEKISMWERLQAFDKWIWTSFYSILTAVKSGKKSFKES 281

Query: 970  LARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCR-GKGDHLVSKHKILSSQ 1028
            L RC  CHDLYWRDEKHC+ICH+TFE+ FDLEE+YAVH ATCR  +  H V  HK L SQ
Sbjct: 282  LLRCGSCHDLYWRDEKHCRICHSTFEVGFDLEEKYAVHVATCREPELSHEVPNHKFLPSQ 341

Query: 1029 LQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGW 1088
            LQ+LKAA+HAIE+ MPE A  G+W KSAHKLWVKRLRRTSSL ELLQV+ DFV A++  W
Sbjct: 342  LQALKAAIHAIEASMPEAAFTGSWMKSAHKLWVKRLRRTSSLPELLQVLVDFVGAMDVDW 401

Query: 1089 LYQWNVQIADTVMGEIIAFFPTMPQTSSALALWLVKLDAIIAPYLE 1134
            LY+ +     T + +II  F TMPQT+SA+ALW+V+LDA+IAPYL+
Sbjct: 402  LYKSSSARLRTNLDDIIVDFQTMPQTTSAVALWVVQLDALIAPYLD 447


>gi|414873454|tpg|DAA52011.1| TPA: hypothetical protein ZEAMMB73_387581 [Zea mays]
          Length = 465

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/466 (48%), Positives = 291/466 (62%), Gaps = 30/466 (6%)

Query: 680  VGLIDLVSAGSSIRMEDPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFH 739
            +G+ D  SA S  + ++P + +  +VP V    SG KIK++  N       S   +G   
Sbjct: 1    MGVFD--SAASCEKADEPQRVL-HNVPRVHPPQSGGKIKKSTKNLCQYSDESLNGSGSLD 57

Query: 740  GVRETNTSRELHPLDSFSLISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNR 799
               +  + R                ++      D    ++    H  Q + LGSDRRYN 
Sbjct: 58   CCHQGQSGR----------------RKNQDYTTDPGRNDLPIAAHGPQVVLLGSDRRYNS 101

Query: 800  YWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEK 859
            YWLFLGPC E DPGH+RVYFESSEDGHWEVID+ + L +LLS+LD RG +EA L+ S+EK
Sbjct: 102  YWLFLGPCREDDPGHRRVYFESSEDGHWEVIDSPQELLSLLSILDSRGTREAHLLTSMEK 161

Query: 860  REAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSP----------VSDVDNNLAL 909
            R+A L +AM   +      R  A SD         D +SP          VSD++N    
Sbjct: 162  RQACLFEAMKKHVEGGKAARLPASSDSYCSQTSSGDGTSPKTSSVDGASSVSDIENTSVP 221

Query: 910  SEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLNAVKHGKRSYLDA 969
            + +   +L S  A+V++ G+ G+E+  MW RLQ FD WIW SFY  L AVK GK+S+ ++
Sbjct: 222  TSLKDSNLDSSSAVVIESGRGGDEKISMWERLQAFDKWIWTSFYSILTAVKSGKKSFKES 281

Query: 970  LARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCR-GKGDHLVSKHKILSSQ 1028
            L RC  CHDLYWRDEKHC+ICH+TFE+ FDLEE+YAVH ATCR  +  H V  HK L SQ
Sbjct: 282  LLRCGSCHDLYWRDEKHCRICHSTFEVGFDLEEKYAVHVATCREPELSHEVPNHKFLPSQ 341

Query: 1029 LQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGW 1088
            LQ+LKAA+HAIE+ MPE A  G+W KSAHKLWVKRLRRTSSL ELLQV+ DFV A++  W
Sbjct: 342  LQALKAAIHAIEASMPEAAFTGSWMKSAHKLWVKRLRRTSSLPELLQVLVDFVGAMDVDW 401

Query: 1089 LYQWNVQIADTVMGEIIAFFPTMPQTSSALALWLVKLDAIIAPYLE 1134
            LY+ +     T + +II  F TMPQT+SA+ALW+V+LDA+IAPYL+
Sbjct: 402  LYKSSSARLRTNLDDIIVDFQTMPQTTSAVALWVVQLDALIAPYLD 447


>gi|147801350|emb|CAN63605.1| hypothetical protein VITISV_019128 [Vitis vinifera]
          Length = 494

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 191/385 (49%), Positives = 249/385 (64%), Gaps = 25/385 (6%)

Query: 19  SEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSSKKLKGFHGRNR 78
           +E+ YPT+  M+  AAAL LTYKQVR WF E+RR++K +NG+ +  SSSKKL     +N 
Sbjct: 6   AEDNYPTQRVMKDYAAALGLTYKQVRGWFFERRRKEKNENGMGV--SSSKKL--VRAKNG 61

Query: 79  LGVVSAKIVKKQDSL------------IHNK------HLSLMVCNGTGKKKNAVTVLQDL 120
           +GVV+AK + ++  L             +N+      H      + +   +    + +DL
Sbjct: 62  IGVVAAKKIIRRVGLAAHCRGNMSSSSTYNRACLGAHHWHCFRNHDSRAVERGKILNEDL 121

Query: 121 LTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCPPLQENQTAKRKRKVSIHDE 180
            T+DYILKKVFRKDGPPLGVEFDSLPS +F    DS NS    QENQT+ ++RKV +  +
Sbjct: 122 STTDYILKKVFRKDGPPLGVEFDSLPSSSFCHCTDSRNSHRTCQENQTSSKRRKVVVVSK 181

Query: 181 --LDHQECCTNTDHVRK-HGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATPL 237
             + HQ+ C N     K HG+GKGLMT WR  NP  G  PTGID AD QV  V   +T +
Sbjct: 182 PAVLHQQFCNNKSAPAKIHGIGKGLMTVWRATNPGAGDFPTGIDFADGQVAAVSPTSTSI 241

Query: 238 SQKPPLRKKRAQQIVSLLKQRRLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAP 297
            +K  ++KK+ ++  S+ K + +   L  K+KP  K  +V+ +K    ++PNKEKCELA 
Sbjct: 242 LRKSLIKKKKPRKQSSVTKWKSVGGKLNDKKKPSRKRGKVECNKDVNQKKPNKEKCELAL 301

Query: 298 DSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPN 357
           +   SQE LDQ AML+DDEELEL+E + GPNP TC  H +T GLHGCSLC+DLLAKFPPN
Sbjct: 302 EEGKSQEHLDQFAMLMDDEELELQESQAGPNPVTCSAHFATNGLHGCSLCKDLLAKFPPN 361

Query: 358 SVKMKQPFGTQPWDSSPETVKKLFK 382
           +VKMKQPF  QPWDSSPE VKK+FK
Sbjct: 362 AVKMKQPFCMQPWDSSPELVKKMFK 386


>gi|255536725|ref|XP_002509429.1| homeobox protein, putative [Ricinus communis]
 gi|223549328|gb|EEF50816.1| homeobox protein, putative [Ricinus communis]
          Length = 1732

 Score =  332 bits (852), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 301/1046 (28%), Positives = 462/1046 (44%), Gaps = 215/1046 (20%)

Query: 281  KGERLRQPN---KEKCELAPDSVISQERLDQIAM----LVDDEELELRELEVGPNPPTCC 333
            + E++RQ     KEK  +   + I +    +IA     L++DE+LEL E+ V        
Sbjct: 445  RAEKMRQKEELRKEKEAVKRQAAIEKATARRIAKESLDLIEDEQLELMEIAVASKGLASI 504

Query: 334  DHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGI 393
             H++   L      RD L+ FPP SV++ +PF  QPW  S E +  L  V+ F  T+A +
Sbjct: 505  VHLNYDALQSLESFRDSLSMFPPQSVQLTKPFAIQPWMDSEENIGNLLMVWRFFITFADV 564

Query: 394  VDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE-------MELGRGCPPHLSVS 446
            + +  FTLDEF QAFHD DS LLG++HV+LL+L++ D+E       + LG       +  
Sbjct: 565  IGLWPFTLDEFVQAFHDYDSRLLGEVHVSLLRLIIKDIEDVARTPSIGLGTNQYSPANPE 624

Query: 447  CKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGS---------------- 490
                 ++       F +  W + LNP+TW EI RQ+ ++AGFG                 
Sbjct: 625  GGHPQIVEGAYMWGFDIRNWQRHLNPVTWPEIFRQLALSAGFGPRLKKKGTAWTYLGDND 684

Query: 491  ------------KQGSSRKE--SLSKEMILML----KYGLRPGTLKGELFRILLEQGNNG 532
                        + GS+ +   +L +E  L+L    ++ L PGT+K   F +L  +G+ G
Sbjct: 685  EVKGCEDTISTLRNGSAAENAFALMRERGLLLPRRSRHRLTPGTVKFAAFHVLSLEGSKG 744

Query: 533  SKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSK----- 587
              V +LA   Q + L   +T++  E  IS  L+ D  LFE+IA STY LR    K     
Sbjct: 745  LTVLELADKIQKSGLRDLTTSKTPEASISVALTRDQKLFERIAPSTYCLRAAYRKDPADA 804

Query: 588  ----------------------EADDFESDAEDIGSVDDNSDDDD--------------- 610
                                  +ADD E D E  G V+++ + DD               
Sbjct: 805  EAILSAARKKIRIFENGFLGGDDADDVERDEESEGDVEEDPEVDDLATPLTANKSAVHSN 864

Query: 611  ---TCSN-------------------RDDSECNSENQRQRRPKYLNCCKSEN----NMLT 644
               TCS                    ++ S   S   +  +   +  C +++    N+  
Sbjct: 865  EANTCSGSGKDNVCSGVPLSIKNELVKEPSSVPSNGLKDAKTPSIEQCVAQDVVAANIDE 924

Query: 645  VYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MEDPTKA-- 700
              +EIDES  G+ W+ GL E EY+ L+++E+LNALV L+ + + G++IR  +ED  +A  
Sbjct: 925  ENIEIDESKSGESWIQGLAEAEYAHLSVEERLNALVALVGIANEGNTIRSVLEDRLEAAN 984

Query: 701  ----------------IAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRET 744
                            + E + S   + S   ++  L    S      V       +   
Sbjct: 985  ALKKQMWAEAQLDRSRLKEDIMSKLDFSSSIGVRAELQVASSA-----VEGSQSPLLLVD 1039

Query: 745  NTSRELHPL---DSFSLI-SKSCGKEKSSSVKDAKAT--EVSTDLHPMQS--------IY 790
            + S+E  P    D  SL+ S+S   EK   V+D  +     S+  H   S         Y
Sbjct: 1040 SKSKEASPSTGEDQKSLLASESVPTEKQLVVQDPSSNPDNFSSQQHGYGSKRSRSQLKAY 1099

Query: 791  LG---------------SDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEA 835
            +G                DRR NRYW F+   ++ DP    ++ E   DG+W +ID+EEA
Sbjct: 1100 IGHIAEETYVYRSLPLGQDRRRNRYWQFVASASKNDPCSGWIFVE-LHDGNWRLIDSEEA 1158

Query: 836  LRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELD---LV 892
              ALLS LD RG +E+ L   L+K E    ++    +  N   R  A+++  E D   + 
Sbjct: 1159 FDALLSSLDTRGVRESHLRIMLQKVE----KSFKDNIRRNLHSRATAETEACEADSSSIC 1214

Query: 893  REDSSSPVSDV-DNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNS 951
                 SP S V  +NL  S        +     +++G+   E+     R Q+F  W+W  
Sbjct: 1215 SAGYGSPTSMVCGSNLDTSN-------TSSLFRIELGRNEMEKKGALKRYQDFQKWMWKE 1267

Query: 952  FY--LNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFEL---DFDLEERYAV 1006
             +  L L A+K+GK+  +  LA CE C D Y  ++ HC  CH TF      F++ E    
Sbjct: 1268 CFNSLTLCAMKYGKKRCIQLLATCEWCFDSYLAEDTHCLSCHQTFSTANKSFNIFE---- 1323

Query: 1007 HAATCRGKG--DHLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRL 1064
            H   C+ K   DH V     L   ++SLKA +  IE  +P +AL   WT++  K W  +L
Sbjct: 1324 HEVQCKDKTKLDHGVCDSS-LPPGIRSLKALLSLIEVSVPAEALESFWTENHRKTWAMKL 1382

Query: 1065 RRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMG---------------EIIAFFP 1109
             ++SS  ELLQ++    SAI    L   N ++     G                 +   P
Sbjct: 1383 NKSSSTEELLQMLTVLESAIKRDCLSA-NFEMTKEFSGGSILSHSALHSRADLRSVPVLP 1441

Query: 1110 TMPQTSSALALWLVKLDAIIAPYLER 1135
             +P+T++A+AL L  LDA IA Y++R
Sbjct: 1442 WIPKTTAAVALRLFDLDASIA-YIQR 1466



 Score = 47.8 bits (112), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 30/168 (17%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           KTP Q +AL K Y+ + YP++     L+  L+LT +Q++ WF  +R +DK        + 
Sbjct: 35  KTPFQLEALEKAYALDTYPSEKVRAELSQRLNLTDRQLQMWFCHRRLKDKDKKEEKKETP 94

Query: 66  SSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSL-----------------------M 102
           S++K K  H       +S   V++  ++I                              M
Sbjct: 95  SNRKRKAVH-------LSESPVEEMRAIIPEPGSDDGSGSGSGSSPFMDPRKVVSADVPM 147

Query: 103 VCNGTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
                     +V  L+ +   +  L +  R DGP LG+EFD LP  AF
Sbjct: 148 NRRYYESSPQSVMELRAIACVEAQLGEPLRDDGPILGMEFDPLPPDAF 195


>gi|357474459|ref|XP_003607514.1| hypothetical protein MTR_4g078860 [Medicago truncatula]
 gi|355508569|gb|AES89711.1| hypothetical protein MTR_4g078860 [Medicago truncatula]
          Length = 1573

 Score =  283 bits (724), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 282/1066 (26%), Positives = 454/1066 (42%), Gaps = 216/1066 (20%)

Query: 278  KLDKGERL-RQPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHI 336
            KL + E L R     + + A +  +++  +     L++DE LEL EL       +    +
Sbjct: 260  KLRQKEELQRVKEAARIKAASERAVARRMVKDAMDLIEDERLELMELAASKKGLSSILAL 319

Query: 337  STKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDI 396
              + +      RD    FPP SV++K+ F  QPW  S E V  L  V+ FL T+A I+ I
Sbjct: 320  DYETMQNLESYRDGQTSFPPKSVQLKRAFSIQPWSDSDENVGNLLMVWRFLITFADILGI 379

Query: 397  CSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE-------MELGRGCPPHLSVSCKF 449
              FTLDE  QAFHD D  +LG+IH+ALL+ ++ D+E         LG     + +     
Sbjct: 380  WPFTLDELIQAFHDYDPRILGEIHIALLRSIIKDIEDVARTPTTGLGGNQNSYTNSGGGH 439

Query: 450  LALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSK---------QGSSRKESL 500
              ++       F +  W + LNPLTW EILRQ  ++AGFG +           S+ + + 
Sbjct: 440  PQVVEGAYVWGFDIRNWQRHLNPLTWPEILRQFALSAGFGPQLKKHNIEQVHPSNNEVND 499

Query: 501  SKEMILMLKYG------------------------LRPGTLKGELFRILLEQGNNGSKVC 536
             K++I  L+ G                        L PGT+K   F +L  +GN G  + 
Sbjct: 500  GKDIISNLRSGAAVENAVAIMQEKGLSNPRRHKHRLTPGTVKYAAFYVLALEGNRGLNIL 559

Query: 537  QLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTY----------------- 579
            ++A   Q + L   +T++  E  I+S LS D  LFE+ A STY                 
Sbjct: 560  EIADKIQKSGLRDLTTSKSPEAAIASALSRDTELFERTAPSTYCVRPVYRKDPADSEAIF 619

Query: 580  -----RLRINTS-----KEADDFE--SDAEDIGSVDDNSDD------------------- 608
                 R+RI TS     + ADD E   D E + + D   DD                   
Sbjct: 620  SAARERIRIFTSGFVGAEVADDGERDEDCESVMAKDPEIDDLGAQTNTKKEVSNFKEFNA 679

Query: 609  ----------------DDTCSNRDDS-------ECNSENQRQRRPKYLNCCKSE-NNMLT 644
                             D+C  + D        E     +  R    +  C ++  N + 
Sbjct: 680  NTVMRSGKDNGEILQTRDSCREKVDEGLGLIVVESFDGRKDVRTSSEIAVCSNDIANPIL 739

Query: 645  VYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSI------RMEDPT 698
              M++DE+  G+ W+ GL EGEYSDL+++E+L+ALV LI + + G+SI      R+E   
Sbjct: 740  KSMDVDENTLGEPWVQGLTEGEYSDLSVEERLHALVALITVTNEGNSIRVALEERLEAAN 799

Query: 699  ----KAIAESVPSVRHYGSGAKIKR------ALPNQHSLPRPSW------VHAGDFH--- 739
                + +AE+    RH    + +K          N+ ++  PS        H  D     
Sbjct: 800  ALKKQMLAEAQLDKRHIKEDSFVKMQSFSYLGNKNEPAVTFPSLGGKQCPSHTVDVKNDK 859

Query: 740  ------GVRET-----NTSRELHPLDSFSLISKSC--------------GKEKSSSVKDA 774
                  G RE      N +   + L   ++ S+ C                EK+ S   +
Sbjct: 860  ALLTPCGQREQIALQENQNPSQNSLLEVNMQSQDCSTGPDNYSIQQSIYAAEKARSNLKS 919

Query: 775  KATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEE 834
                ++   +  +S+ LG DRR NRYW F+   ++ DPG  R++ E   DG W++ID+ E
Sbjct: 920  YIDHLAEQTYMYRSLPLGLDRRRNRYWQFVTSASQNDPGAGRIFVE-LHDGCWKLIDSVE 978

Query: 835  ALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVRE 894
               ALL  LD RG +E+ L   L++ E    +++    V N E+  + Q   +  +L +E
Sbjct: 979  GFDALLVSLDLRGIRESHLHMMLQRIETSFKESVRRN-VQNGEM--IMQKGDTVKNLKKE 1035

Query: 895  ------------DSSSPVS----DVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMW 938
                        D + P S    D+D ++A +           +  + +G+   E    +
Sbjct: 1036 AVKMAADLDCSADINCPTSVCIDDLDTSVAST-----------SFTIQLGRNEIENKDAY 1084

Query: 939  SRLQEFDAWIWNSFYLNL---NAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFE 995
             +  +F+ W+     LN    +A+K+GK+     L  C+ C  +Y+  E  C +CH  F 
Sbjct: 1085 MKYWDFEKWMRKEC-LNCSVSSAMKYGKKRCKQLLLICDLCGHVYFFREVQCPLCHRIFS 1143

Query: 996  LDFDLEERYAVHAATCRGKGD---HLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAW 1052
                    Y  H A   GK +            S++++ LK  +  +E  +P++AL   W
Sbjct: 1144 TSQGNSSSYE-HIAQSEGKMNIDADFFHDSSSSSTRMRLLKILLSVVEVTLPQEALQPFW 1202

Query: 1053 TKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWL---YQWNVQIADTVM-------- 1101
            T+   K W   L  +SS  ++LQ++     AI   +L   Y+   ++ D+V         
Sbjct: 1203 TERYRKSWSSNLEASSSTEDILQMLTALEGAIKREYLASDYETTNELLDSVCSSGCLPND 1262

Query: 1102 ---GEIIAFFPTMPQTSSALALWLVKLDAIIAPYLERVNSGKEDAR 1144
               GE I   P +P T++A+AL L+ LDA I    ++    K+D++
Sbjct: 1263 IIGGEKIPVLPWVPFTTAAVALRLMDLDACIFYTSQQKQETKKDSK 1308


>gi|6560763|gb|AAF16763.1|AC010155_16 F3M18.14 [Arabidopsis thaliana]
          Length = 1819

 Score =  277 bits (708), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 289/1036 (27%), Positives = 446/1036 (43%), Gaps = 230/1036 (22%)

Query: 301  ISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVK 360
            I++E +D    L++DE+LEL EL            +    L    + RD L+ FPP S++
Sbjct: 588  IAKESMD----LIEDEQLELMELAAISKGLPSVLQLDHDTLQNLEVYRDSLSTFPPKSLQ 643

Query: 361  MKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIH 420
            +K PF   PW  S ETV  L  V+ FL +++ ++D+  FTLDEF QAFHD DS LLG+IH
Sbjct: 644  LKMPFAISPWKDSDETVGNLLMVWRFLISFSDVLDLWPFTLDEFIQAFHDYDSRLLGEIH 703

Query: 421  VALLKLLLSDVEMELGR-----------------GCPPHLSVSCKFLALLHSVENQEFFV 463
            V LL+ ++ DVE ++ R                 G  P +     F     S     F +
Sbjct: 704  VTLLRSIIRDVE-DVARTPFSGIGNNQYTTANPEGGHPQIVEGVAFFV---SAYAWGFDI 759

Query: 464  EFWNKSLNPLTWTEILRQVLVAAGFGSK----------QGSSRKESLSKEMILMLKYG-- 511
              W K LNPLTW EILRQ+ ++AGFG K           G   +    +++I  ++ G  
Sbjct: 760  RSWKKHLNPLTWPEILRQLALSAGFGPKLKKKHSRLTNTGDKDEAKGCEDVISTIRNGTA 819

Query: 512  ----------------------LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNL 549
                                  L PGT+K   F +L  +G+ G  V +LA   Q + L  
Sbjct: 820  AESAFASMREKGLLAPRKSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELADKIQKSGLRD 879

Query: 550  ESTTEEVELLISSTLSSDITLFEKIASSTYRLR--------------------------- 582
             +T++  E  IS  L+ D+ LFE+IA STY +R                           
Sbjct: 880  LTTSKTPEASISVALTRDVKLFERIAPSTYCVRAPYVKDPKDGEAILADARKKIRAFENG 939

Query: 583  ------INTSKEADDFESDAEDIGSVDDNSD---------------------DDDTCSNR 615
                  +N  +  +DFE D ++   VDD +                      D   C  +
Sbjct: 940  FTGPEDVNDLERDEDFEIDIDEDPEVDDLATLASASKSAVLGEANVLSGKGVDTMFCDVK 999

Query: 616  DDSECNSENQRQRRP----KYLNCCKSENNMLTVY----MEIDESHRGDVWLSGLMEGEY 667
             D +   E +    P    K +    SE +  TV       IDES++G  W+ GL EG+Y
Sbjct: 1000 ADVKSELEKEFSSPPPSTMKSIVPQHSERHKNTVVGGVDAVIDESNQGQSWIQGLTEGDY 1059

Query: 668  SDLTIDEKLNALV--------------GLIDLVSAGSSIR-------------MEDPTKA 700
              L+++E+LNALV              GL D + A ++++             M D  K 
Sbjct: 1060 CHLSVEERLNALVALVGIANEGNSIRTGLEDRMEAANALKKQMWAEAQLDNSCMRDVLKL 1119

Query: 701  IAESVPSVRHYGSGA--KIKRALPNQHSLPR-PSWVH---------AGDFHGVRETNTSR 748
              +++ S +   +     I+ +   + S  R PS +          + D H   +++  R
Sbjct: 1120 DLQNLASSKTESTIGLPIIQSSTRERDSFDRDPSQLLDETKPLEDLSNDLH---KSSAER 1176

Query: 749  ELHPLDSFSLISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCN 808
             L   D+ ++  ++   ++S S   +     + +++P +S+ LG DRR+NRYW F    +
Sbjct: 1177 ALINQDA-NISQENYASKRSRSQLKSYIGHKAEEVYPYRSLPLGQDRRHNRYWHFAVSVS 1235

Query: 809  EYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFL---- 864
            + DP   R+ F    DG W +ID+EEA   L++ LD RG +E+ L   L+K E       
Sbjct: 1236 KSDPC-SRLLFVELHDGKWLLIDSEEAFDILVASLDMRGIRESHLRIMLQKIEGSFKENA 1294

Query: 865  CQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIV 924
            C+ +   L  N  +   +  + S  D V   SS          A+S    +S+ +  +I 
Sbjct: 1295 CKDIK--LARNPFLTEKSVVNHSPTDSVSPSSS----------AISGSNSDSMETSTSIR 1342

Query: 925  LDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNLN--AVKHGKRSYLDALARCERCHDLYWR 982
            +D+G+   E   +  R  +F  W+W   Y +L   A K+GK+   + LA C+ C   Y  
Sbjct: 1343 VDLGRNDTENKNLSKRFHDFQRWMWTETYSSLPSCARKYGKKRS-ELLATCDACVASYLS 1401

Query: 983  DEKHCKICHTTFELDFDLEERYAVHAATCRGKGDHLVSKHKILSSQL---------QSLK 1033
            +   C  CH   ++                      V   +IL S L         + LK
Sbjct: 1402 EYTFCSSCHQRLDV----------------------VDSSEILDSGLAVSPLPFGVRLLK 1439

Query: 1034 AAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQWN 1093
              +  +E+ +P++AL   WT+   K W  RL  +SS  ELLQV+    SAI +  L   N
Sbjct: 1440 PLLVFLEASVPDEALESFWTEDQRKKWGFRLNTSSSPGELLQVLTSLESAIKKESLSS-N 1498

Query: 1094 VQIADTVMGEI---------IAFFPTMPQTSSALALWLVKLDA-IIAPYLERVNSGKEDA 1143
               A  ++G           +   P +P+T SA+AL L +LDA II    E+     ED 
Sbjct: 1499 FMSAKELLGAANAEADDQGSVDVLPWIPKTVSAVALRLSELDASIIYVKPEKPEVIPEDE 1558

Query: 1144 RMRCRGIFLFPQ-RPF 1158
              +   I LFP+  PF
Sbjct: 1559 NEQ---ISLFPRDSPF 1571



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 27/171 (15%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           KTP Q + L K YSEEKYP+++    L+  LDL+ +Q++ WF  +R +DK D     P  
Sbjct: 81  KTPFQLETLEKVYSEEKYPSEATRAELSEKLDLSDRQLQMWFCHRRLKDKKDGQSNKPVK 140

Query: 66  SSKKLKGFHGRNRLGVVSAKIVKKQDSL-----------IHNKHLSLMVCNGTGK----- 109
           SS         N L   +A  V +QDS              N   +    + + +     
Sbjct: 141 SSVAAVQSASVNELP-AAAGSVPEQDSRSDSGSESGCSPYSNSRRNFASGSSSSRAELDE 199

Query: 110 ----------KKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
                      + +  V + ++  +  L +  R DGP LG+EFD LP  AF
Sbjct: 200 YETMGKPSYESRLSTMVHRAIVCIEAQLGEPLRDDGPILGMEFDPLPPGAF 250


>gi|186478960|ref|NP_174164.2| homeobox-1 [Arabidopsis thaliana]
 gi|332192854|gb|AEE30975.1| homeobox-1 [Arabidopsis thaliana]
          Length = 1705

 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 289/1027 (28%), Positives = 443/1027 (43%), Gaps = 218/1027 (21%)

Query: 301  ISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVK 360
            I++E +D    L++DE+LEL EL            +    L    + RD L+ FPP S++
Sbjct: 480  IAKESMD----LIEDEQLELMELAAISKGLPSVLQLDHDTLQNLEVYRDSLSTFPPKSLQ 535

Query: 361  MKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIH 420
            +K PF   PW  S ETV  L  V+ FL +++ ++D+  FTLDEF QAFHD DS LLG+IH
Sbjct: 536  LKMPFAISPWKDSDETVGNLLMVWRFLISFSDVLDLWPFTLDEFIQAFHDYDSRLLGEIH 595

Query: 421  VALLKLLLSDVE-------MELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLNPL 473
            V LL+ ++ DVE         +G       +       ++       F +  W K LNPL
Sbjct: 596  VTLLRSIIRDVEDVARTPFSGIGNNQYTTANPEGGHPQIVEGAYAWGFDIRSWKKHLNPL 655

Query: 474  TWTEILRQVLVAAGFGSK----------QGSSRKESLSKEMILMLKYG------------ 511
            TW EILRQ+ ++AGFG K           G   +    +++I  ++ G            
Sbjct: 656  TWPEILRQLALSAGFGPKLKKKHSRLTNTGDKDEAKGCEDVISTIRNGTAAESAFASMRE 715

Query: 512  ------------LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELL 559
                        L PGT+K   F +L  +G+ G  V +LA   Q + L   +T++  E  
Sbjct: 716  KGLLAPRKSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELADKIQKSGLRDLTTSKTPEAS 775

Query: 560  ISSTLSSDITLFEKIASSTYRLR---------------------------------INTS 586
            IS  L+ D+ LFE+IA STY +R                                 +N  
Sbjct: 776  ISVALTRDVKLFERIAPSTYCVRAPYVKDPKDGEAILADARKKIRAFENGFTGPEDVNDL 835

Query: 587  KEADDFESDAEDIGSVDD---------------------NSDDDDTCSNRDDSECNSENQ 625
            +  +DFE D ++   VDD                        D   C  + D +   E +
Sbjct: 836  ERDEDFEIDIDEDPEVDDLATLASASKSAVLGEANVLSGKGVDTMFCDVKADVKSELEKE 895

Query: 626  RQRRP----KYLNCCKSENNMLTVY----MEIDESHRGDVWLSGLMEGEYSDLTIDEKLN 677
                P    K +    SE +  TV       IDES++G  W+ GL EG+Y  L+++E+LN
Sbjct: 896  FSSPPPSTMKSIVPQHSERHKNTVVGGVDAVIDESNQGQSWIQGLTEGDYCHLSVEERLN 955

Query: 678  ALV--------------GLIDLVSAGSSIR-------------MEDPTKAIAESVPSVRH 710
            ALV              GL D + A ++++             M D  K   +++ S + 
Sbjct: 956  ALVALVGIANEGNSIRTGLEDRMEAANALKKQMWAEAQLDNSCMRDVLKLDLQNLASSKT 1015

Query: 711  YGSGA--KIKRALPNQHSLPR-PSWVH---------AGDFHGVRETNTSRELHPLDSFSL 758
              +     I+ +   + S  R PS +          + D H   +++  R L   D+ ++
Sbjct: 1016 ESTIGLPIIQSSTRERDSFDRDPSQLLDETKPLEDLSNDLH---KSSAERALINQDA-NI 1071

Query: 759  ISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVY 818
              ++   ++S S   +     + +++P +S+ LG DRR+NRYW F    ++ DP   R+ 
Sbjct: 1072 SQENYASKRSRSQLKSYIGHKAEEVYPYRSLPLGQDRRHNRYWHFAVSVSKSDPC-SRLL 1130

Query: 819  FESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFL----CQAMSSGLVN 874
            F    DG W +ID+EEA   L++ LD RG +E+ L   L+K E       C+ +   L  
Sbjct: 1131 FVELHDGKWLLIDSEEAFDILVASLDMRGIRESHLRIMLQKIEGSFKENACKDIK--LAR 1188

Query: 875  NTEIRHVAQSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQ 934
            N  +   +  + S  D V   SS          A+S    +S+ +  +I +D+G+   E 
Sbjct: 1189 NPFLTEKSVVNHSPTDSVSPSSS----------AISGSNSDSMETSTSIRVDLGRNDTEN 1238

Query: 935  HRMWSRLQEFDAWIWNSFYLNLN--AVKHGK-RSYLDALARCERCHDLYWRDEKHCKICH 991
              +  R  +F  W+W   Y +L   A K+GK RS L  LA C+ C   Y  +   C  CH
Sbjct: 1239 KNLSKRFHDFQRWMWTETYSSLPSCARKYGKKRSEL--LATCDACVASYLSEYTFCSSCH 1296

Query: 992  TTFELDFDLEERYAVHAATCRGKGDHLVSKHKILSSQL---------QSLKAAVHAIESV 1042
               ++                      V   +IL S L         + LK  +  +E+ 
Sbjct: 1297 QRLDV----------------------VDSSEILDSGLAVSPLPFGVRLLKPLLVFLEAS 1334

Query: 1043 MPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMG 1102
            +P++AL   WT+   K W  RL  +SS  ELLQV+    SAI +  L   N   A  ++G
Sbjct: 1335 VPDEALESFWTEDQRKKWGFRLNTSSSPGELLQVLTSLESAIKKESLSS-NFMSAKELLG 1393

Query: 1103 EIIA---------FFPTMPQTSSALALWLVKLDA-IIAPYLERVNSGKEDARMRCRGIFL 1152
               A           P +P+T SA+AL L +LDA II    E+     ED   +   I L
Sbjct: 1394 AANAEADDQGSVDVLPWIPKTVSAVALRLSELDASIIYVKPEKPEVIPEDENEQ---ISL 1450

Query: 1153 FPQ-RPF 1158
            FP+  PF
Sbjct: 1451 FPRDSPF 1457



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 27/171 (15%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           KTP Q + L K YSEEKYP+++    L+  LDL+ +Q++ WF  +R +DK D     P  
Sbjct: 46  KTPFQLETLEKVYSEEKYPSEATRAELSEKLDLSDRQLQMWFCHRRLKDKKDGQSNKPVK 105

Query: 66  SSKKLKGFHGRNRLGVVSAKIVKKQDSL-----------IHNKHLSLMVCNGTGK----- 109
           SS         N L   +A  V +QDS              N   +    + + +     
Sbjct: 106 SSVAAVQSASVNEL-PAAAGSVPEQDSRSDSGSESGCSPYSNSRRNFASGSSSSRAELDE 164

Query: 110 ----------KKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
                      + +  V + ++  +  L +  R DGP LG+EFD LP  AF
Sbjct: 165 YETMGKPSYESRLSTMVHRAIVCIEAQLGEPLRDDGPILGMEFDPLPPGAF 215


>gi|356515148|ref|XP_003526263.1| PREDICTED: uncharacterized protein LOC100797480 [Glycine max]
          Length = 1768

 Score =  266 bits (680), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 269/1038 (25%), Positives = 453/1038 (43%), Gaps = 189/1038 (18%)

Query: 278  KLDKGERLRQPNKE-KCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHI 336
            KL + E LR+  +  + + A +  I++    +   L++DE LEL EL       +    +
Sbjct: 447  KLRQKEELRREKEAARIKAANERAIARRIAKESIELIEDERLELMELAASKKELSSILAL 506

Query: 337  STKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDI 396
              + +      RD  A FPP SV++K+ F  +PW  S E V  L  V+ FL T+A ++ I
Sbjct: 507  DYETIQNLEFYRDGRASFPPKSVQLKRIFSIKPWSDSDENVGNLLMVWRFLITFADVLGI 566

Query: 397  CSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE-----MELGRGCPPHLSVSCKFLA 451
              FT+DE  QAFHD D  LLG+IH+ALLK ++ D+E        G GC  H SV+     
Sbjct: 567  WPFTVDELIQAFHDHDPRLLGEIHIALLKSIIKDIEDVARTPSTGLGCNQH-SVTNSGGG 625

Query: 452  LLHSVENQ---EFFVEFWNKSLNPLTWTEILRQVLVAAGFG---------------SKQG 493
                VE      F +  W + LNPLTW EILRQ  ++AGFG               + +G
Sbjct: 626  HPQVVEGAYLWGFDIRNWQRHLNPLTWPEILRQFALSAGFGPQLKKLSIEQVHPCNNNEG 685

Query: 494  SSRKESLS---------KEMILMLKYGLR----------PGTLKGELFRILLEQGNNGSK 534
            +  ++ +S           + +M + GL           PGT+K   F +L  +G+ G  
Sbjct: 686  NDGRDIISNLRSGAAVENAVAIMQEKGLSNPRRSRHCLTPGTVKFAAFHVLSLEGSKGLN 745

Query: 535  VCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADD--- 591
            + ++A   Q + L   +T++  E  IS+ LS D  LFE+ A STY +R    K+  D   
Sbjct: 746  ILEVADKIQKSGLRDLTTSKTPEASISAALSRDTKLFERTAPSTYCVRPAYRKDPADSEA 805

Query: 592  ----------------FESDAEDIGSVDDNSDDD------------DTCSNRDDSEC--- 620
                             E++A D G  D++S+ D            +T + ++ S     
Sbjct: 806  IYSGARERIRMFKSGFVEAEAADNGERDEDSESDMEEDPEIDDLGTETNAKKESSNYEGF 865

Query: 621  NSENQRQRRPKYLNCCKSENNMLTVYME-------------------------------- 648
            N++++ + R   +   ++ +  L    E                                
Sbjct: 866  NADSEMRNRKDSVEVLQTHDTSLEKVGEDLASIVAKDFNEHKDVSTSSGIAVCNNDVVDP 925

Query: 649  ------IDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MEDPTKA 700
                  +DES  G+ W+ GL EGEYSDL++ E+L+ALV LI + + G+SIR  +E+  +A
Sbjct: 926  NVKGIAVDESIPGEPWIQGLTEGEYSDLSVVERLHALVALIGVATEGNSIRVVLEERLEA 985

Query: 701  I--------AES--------------VPSVRHYGSGAKIKRALPNQHSLPRP-------- 730
                     AE+              + SV +     ++    P+  S   P        
Sbjct: 986  ANALKKQMWAEAQLDKRRIKEDYFAKMQSVSYLDKTNELTVVFPSADSKHSPVLIADDKN 1045

Query: 731  --SWVHAGDFH----GVRETNTSRELHPL-------------DSFSLISKSCGKEKSSSV 771
              + +++ D H     ++E     +  PL             D++S        EKS S 
Sbjct: 1046 SKALLNSHDLHEQSIELQENQNHLQSSPLKVNKQMQDCSTGPDNYSFQHSGYVVEKSRSN 1105

Query: 772  KDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVID 831
              +    ++   +  +S+ LG DRR NRYW F     + DPG  R++ E + DG W++ID
Sbjct: 1106 LKSYIGHLAEQTYMYRSLPLGLDRRRNRYWQFTTSA-QNDPGCGRIFVELN-DGRWKLID 1163

Query: 832  TEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVN-NTEIRHVAQSDQSELD 890
            +EE   ALL+ LD RG +E+ L   L++ E +  + +     N N  +++    ++ + +
Sbjct: 1164 SEEGFDALLASLDVRGIRESHLHMMLQRIETYFKEFVRKNAQNVNMRMQNGDPVERLKTE 1223

Query: 891  LVREDSSSPVS-DVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIW 949
             V   S+   S ++  + ++     ++  +  + V+ +G+   +      R  +F+ W+ 
Sbjct: 1224 SVEMASNQDCSANIHGSSSVCIDNLDASETSTSFVVQLGRNEADNKDACMRYWDFEKWMR 1283

Query: 950  NSF--YLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFEL--DFDLEERYA 1005
                 +  L+A+K GK+      + C+ C   Y+     C  C  TF          ++ 
Sbjct: 1284 KECLNFSVLSAMKFGKKWCHQLQSICDLCLHAYFSGGAPCSSCCRTFSACKSNPSSSKHI 1343

Query: 1006 VHAATCRGKGDHLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLR 1065
            VH+                LS +++ LK  +  +E  +P +AL   W  S  K W  +L 
Sbjct: 1344 VHSEGKVKIDIDCFHASSSLSLRIRLLKILLSIVEVTLPLEALQPLWRDSCRKSWSTKLD 1403

Query: 1066 RTSSLAELLQVVADFVSAINEGWL---YQWNVQI-----------ADTVMGEIIAFFPTM 1111
             +SS  +LLQ++     AI   +L   Y+   ++            D++ GE ++  P +
Sbjct: 1404 ASSSSEDLLQILTALEGAIKREYLDSNYETTFELLGLFSASGCHTKDSIDGERMSVLPWV 1463

Query: 1112 PQTSSALALWLVKLDAII 1129
            P TS+A+AL L++LDA I
Sbjct: 1464 PYTSAAVALRLLQLDACI 1481


>gi|147834372|emb|CAN65380.1| hypothetical protein VITISV_028554 [Vitis vinifera]
          Length = 1797

 Score =  261 bits (667), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 244/921 (26%), Positives = 404/921 (43%), Gaps = 201/921 (21%)

Query: 383  VFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE-----MELGR 437
            V+ FL T+A ++ +  FTLDEF QAFHD DS L+G+IH+AL+KL++ D+E       LG 
Sbjct: 603  VWRFLITFADVLQLWPFTLDEFVQAFHDYDSRLMGEIHIALVKLIIKDIEDVARTPSLGL 662

Query: 438  GCPPHLSVSCKFLALLHSVENQ---EFFVEFWNKSLNPLTWTEILRQVLVAAGFGSK-QG 493
            G   + +   +     H VE      F +  W + LNPLTW EILRQ  ++AGFG + + 
Sbjct: 663  GTNQNTAAGPEG-GHPHIVEGAYAWGFDIRNWQRHLNPLTWPEILRQFALSAGFGPQLKK 721

Query: 494  SSRKESLSKE---------MILMLKYG------------------------LRPGTLKGE 520
             S + S S+E         ++  L+ G                        L PGT+K  
Sbjct: 722  RSSEWSYSRENNEIKGCEDIVSTLRNGSAAVNAVAIMKGKGFSLSRRSRHRLTPGTVKFA 781

Query: 521  LFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYR 580
            +F +L  +G+ G  + +LA   Q + L   + ++  E  IS+ LS D  LFE+ A  TY 
Sbjct: 782  VFHVLSLEGSKGLTILELADKIQKSGLRDLTRSKAPEASISAALSRDAALFERTAPCTYC 841

Query: 581  LRINTSKEADDFES---------------------------------------DAEDIGS 601
            +R    K+  D E                                        + +D+G+
Sbjct: 842  VRPTFRKDPADAEKVLSAAREKVHVFENGFLAGEDVDDVERDDDSECDVAEGPEVDDLGT 901

Query: 602  VDDN-------SDDDDTCS-NRDDSECNSE-NQRQRRPKYLNCCKSENNMLTVYMEI--- 649
              +        ++D  TCS N  ++ CN   N +    K  +   S    +T    I   
Sbjct: 902  PSNANKNTIHLNNDGSTCSGNGKENACNDVINPQNEVVKDFSSPLSSGTKVTTTASITLN 961

Query: 650  --------------DESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRME 695
                          DES+ G+ W+ GL EGEYSDL+++E+LNALV LI + + G++IR  
Sbjct: 962  QYGAGNPDQENVEIDESNSGEPWVQGLAEGEYSDLSVEERLNALVALIGVANEGNTIR-- 1019

Query: 696  DPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAG-DFHGVRETNTSRE---LH 751
                               A ++  L    +L +  W  A  D   ++E N ++      
Sbjct: 1020 -------------------AVLEDRLEAAIALKKQMWAEAQLDKKRLKEENITKNHLSTL 1060

Query: 752  PLDSFSLISKSC-----------GKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRY 800
            P +  S++ +S              E+S     +     + D++  +S+ LG DRR NRY
Sbjct: 1061 PTEGTSIVQESTVPNNFISQHGYDAERSRLQLKSYIAHRAEDVYVYRSLPLGQDRRRNRY 1120

Query: 801  WLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKR 860
            W F+   +  DPG  R++ E   DG+W +I++EEA  AL++ LD RG +E+ L   L+K 
Sbjct: 1121 WQFVASASRNDPGSGRIFVE-LHDGYWRLINSEEAFDALITSLDTRGIRESHLHAMLQKI 1179

Query: 861  EAFLCQAMSSGLVNNTE-IRHVAQSDQSELDLVREDSSSP--VSDVDN-NLALSEIGKES 916
            E     A    +  N++ + +V Q+  +  +   E  S+P  ++  D+ N  +  +  ++
Sbjct: 1180 E----MAFKENVRRNSQCVDNVGQTRTTVKNENTETDSNPDCIAGFDSPNSTVCGLVSDA 1235

Query: 917  LPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLN--LNAVKHGKRSYLDALARCE 974
            L    +  +++G+   E+     R Q+F  W+W   + +  L ++K+GK+     L+ C+
Sbjct: 1236 LEPLSSFGIELGRNEMEKRATLKRYQDFQKWMWKECFNSEALCSMKYGKKRCAQLLSICD 1295

Query: 975  RCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRGKGDHLVSKHKILSSQL----Q 1030
             C + Y+ ++ HC  CH TF   FD    +  H   C  K         I  S L    +
Sbjct: 1296 FCFECYFNEDNHCPSCHRTFG-SFDNNVHFLEHVIQCESKKKTNPEDLHISDSSLPLGIR 1354

Query: 1031 SLKAAVHAIESVMPEDALVGAWTKSAHK-LWVKRLRRTSSLAELLQVV------------ 1077
             LKA +  IE  +P DAL   W +   +  W  +++ +SS+ +LLQV+            
Sbjct: 1355 LLKALLAFIEVSIPLDALESFWMEGYQRETWGMKIQTSSSIEDLLQVLEEESCCLTIVTG 1414

Query: 1078 ---------ADFVSAINEGWLYQWNVQ-------------------IADTVMGEIIAFFP 1109
                      D +  + EG + Q  +                    + D+     +    
Sbjct: 1415 NRQNPLLMAVDLIVTLLEGVIKQDRLSTEFRTTKELLGSCTSSGNAVYDSXYTGSVPVLA 1474

Query: 1110 TMPQTSSALALWLVKLDAIIA 1130
             +PQT++A+A+ L++LDA I+
Sbjct: 1475 WIPQTTAAVAVRLLELDASIS 1495



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 14/158 (8%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           KTP Q + L + Y+ E YPT++    L+  L L+ +Q++ WF  +R +DK + G    ++
Sbjct: 33  KTPFQLQTLERAYALEPYPTEASRAELSEKLGLSDRQLQMWFCHRRLKDKKE-GQAKEAA 91

Query: 66  SSKKLKGF------HGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTG-------KKKN 112
           S K             R+  G  S        S +    L  ++    G       +   
Sbjct: 92  SKKPRNAVAEEFEDEARSEHGSHSGSGSXSGSSPLGYGQLPQVLSGNMGPMGRRSYESPQ 151

Query: 113 AVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
           ++  L+ + + +  L +  R DGP LG+EFD LP  AF
Sbjct: 152 SIFELRVIASVEAQLGEPLRDDGPILGMEFDPLPPDAF 189


>gi|224125578|ref|XP_002329839.1| predicted protein [Populus trichocarpa]
 gi|222870901|gb|EEF08032.1| predicted protein [Populus trichocarpa]
          Length = 1423

 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 160/525 (30%), Positives = 246/525 (46%), Gaps = 119/525 (22%)

Query: 290 KEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRD 349
           K   E A    I+++ LD    L++DE+LEL EL           +++   L     CRD
Sbjct: 422 KAAMEKATARKIAKDSLD----LIEDEQLELMELIAASKGLASIVNLNYDTLQNLDSCRD 477

Query: 350 LLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFH 409
           LL  FP  +V++K+ FG QPW  S E +  L  V+ F  T+A ++ +  FTLDEF QAFH
Sbjct: 478 LLITFPSEAVQLKKSFGFQPWLDSEENIGNLLMVWKFFITFADVLGLWPFTLDEFVQAFH 537

Query: 410 DKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLA--------LLHSVENQEF 461
           D DS LLG++HVALLKL++ D+E ++ R     L ++  + A        ++       F
Sbjct: 538 DYDSRLLGELHVALLKLIIKDIE-DVARTPSSGLGINQYYTANPEGGHPQIVQGAHTWGF 596

Query: 462 FVEFWNKSLNPLTWTEILRQVLVAAGFGSK----------------------------QG 493
            +  W + LN LTW EILRQ+ ++AGFG +                             G
Sbjct: 597 DIRNWQQHLNSLTWPEILRQLALSAGFGPRLKKKCATWAGLGDIDEVKDCEDIVSIIRNG 656

Query: 494 SSRKES--LSKEMILML----KYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAEL 547
           S+ + +  L +E  L+L    ++ L PGT+K   F +L  +G+ G  V +LA   Q + L
Sbjct: 657 SAAENAFVLMREKGLLLPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELADRIQKSGL 716

Query: 548 NLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSK-------------------- 587
              +T++  E  IS  L+ D  LFE+IA STY +R    K                    
Sbjct: 717 RDLTTSKTPEASISVALTRDQKLFERIAPSTYCVRAAFRKDPADAEAILAEARKKIRIFE 776

Query: 588 -------EADDFESDAEDIGSVDDNSDDDDTC----SNR--------------------D 616
                  +ADD E D +  G  D++ + DD      SN+                    +
Sbjct: 777 NGFLGGEDADDVERDEDSEGDADEDPEVDDLATPMSSNKSTVHSSKVNALSGSGSGKVSN 836

Query: 617 DSECNSENQRQR--------------RPKYLNCC-----KSENNMLTVYMEIDESHRGDV 657
           D+    +N+ ++               P  +  C     +  NN     +EIDE++ G+ 
Sbjct: 837 DASLTVQNKCEKGLSSFSLNGPKDAVAPSIIEQCVTHKDEGTNNADEENIEIDENNSGES 896

Query: 658 WLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MEDPTKA 700
           W+ GL EGEYS L+++E+L+ALV L+ + + G+SIR  +ED  +A
Sbjct: 897 WIQGLTEGEYSHLSVEERLSALVVLVGISNEGNSIRAVLEDRLEA 941



 Score =  139 bits (351), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 182/404 (45%), Gaps = 57/404 (14%)

Query: 750  LHPLDSFSLISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNE 809
            L+P D+ S        ++S S   A    ++ ++   +S+ LG DRR NRYW F+   + 
Sbjct: 1039 LNP-DNISAQQHGYASKRSRSQLKAYIAHLAEEMCIYRSLPLGQDRRRNRYWQFVASASR 1097

Query: 810  YDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMS 869
             DP   R++ E   DG+W VID+EEA   LLS LD RG +E+ L   L+K E    + + 
Sbjct: 1098 NDPCSGRIFVEL-HDGNWRVIDSEEAFDTLLSSLDTRGVRESHLCIMLQKIELSFKENVR 1156

Query: 870  SGLVNNTEIRHVAQSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGK 929
                     R++  ++     +V   SS                 ++L +     +++G+
Sbjct: 1157 ---------RNLGSANIVPSSMVCVSSS-----------------DTLDAFSLFSIELGR 1190

Query: 930  KGEEQHRMWSRLQEFDAWIWNSFY--LNLNAVKHGKRSYLDALARCERCHDLYWRDEKHC 987
               E+     R Q+F  W+W   +    L AVK+GK+     L  C+ C D Y  ++ HC
Sbjct: 1191 NSAEKKGALKRYQDFQNWMWKECFNSSTLCAVKYGKKRCEQLLDTCDLCLDTYLSEDPHC 1250

Query: 988  KICHTTFELD---FDLEERYAVHAATCRGK----GDHLVSKHKILSSQLQSLKAAVHAIE 1040
              CH TF+ +   FD    +A H   C+ K      +  +    L    + L A +  IE
Sbjct: 1251 LSCHQTFKFENKKFD----FAEHEIQCKKKRKIDPGNACTCDSSLPPGTRLLTALLSCIE 1306

Query: 1041 SVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTV 1100
              +P++AL   W     K W  +L   SS  ELLQ++  F SAI    L   N ++   +
Sbjct: 1307 VSVPQEALESFWMGIPRKDWGMKLAMPSSTEELLQILTVFESAIKRERLSS-NFEMTKEL 1365

Query: 1101 MGE---------------IIAFFPTMPQTSSALALWLVKLDAII 1129
            +G                ++   P MP+T++A+AL L +LDA I
Sbjct: 1366 LGSSALSGSAAHDSASLGLVPVLPWMPKTTAAVALRLFELDASI 1409


>gi|334188190|ref|NP_001190470.1| Homeodomain-like transcriptional regulator [Arabidopsis thaliana]
 gi|332007688|gb|AED95071.1| Homeodomain-like transcriptional regulator [Arabidopsis thaliana]
          Length = 1507

 Score =  196 bits (497), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 157/540 (29%), Positives = 247/540 (45%), Gaps = 116/540 (21%)

Query: 267 KRKPVAKGKQVKLDKGERLRQPNKEK----CELAPDSVISQERLDQIAMLVDDEELELRE 322
           +R+   K + ++ +K  +  +  KEK     + A +  I+++   +   L++DE LEL E
Sbjct: 403 RREKFLKKETIRAEKMRQKEEMRKEKEVARLKAANERAIARKIAKESMELIEDERLELME 462

Query: 323 LEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFK 382
           +            +  + L      RD  A FPP SVK+K+PF  +PW+ S E V  L  
Sbjct: 463 VAALTKGLPSMLALDFETLQNLDEYRDKQAIFPPTSVKLKKPFAVKPWNGSDENVANLLM 522

Query: 383 VFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE-----MELGR 437
           V+ FL T+A ++ +  FTLDEFAQAFHD D  L+G+IH+ LLK ++ D+E     +  G 
Sbjct: 523 VWRFLITFADVLGLWPFTLDEFAQAFHDYDPRLMGEIHIVLLKTIIKDIEGVVRTLSTGV 582

Query: 438 GCPPHLSVSCKFLALLHSVENQ---EFFVEFWNKSLNPLTWTEILRQVLVAAGFGS--KQ 492
           G   +++ +       H VE      F +  W K+LN  TW EILRQ+ ++AG G   K+
Sbjct: 583 GANQNVAANPGG-GHPHVVEGAYAWGFDIRSWRKNLNVFTWPEILRQLALSAGLGPQLKK 641

Query: 493 GSSRKESL--------SKEMILMLKYG------------------------LRPGTLKGE 520
            + R  S+        S+ +I  L+ G                        L PGT+K  
Sbjct: 642 MNIRTVSVHDDNEANNSENVIFNLRKGVAAENAFAKMQERGLSNPRRSRHRLTPGTVKFA 701

Query: 521 LFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYR 580
            F +L  +G  G  + ++A   Q + L   +T+   E  +++ LS D  LFE++A STY 
Sbjct: 702 AFHVLSLEGEKGLNILEVAEKIQKSGLRDLTTSRTPEASVAAALSRDTKLFERVAPSTYC 761

Query: 581 LRINTSKEADD--------------FESDAEDIGSVDDNSDDDDTCSNRDDSECNSENQR 626
           +R +  K+A D              F+S   D+  VDD   D+D+ S+  +      N +
Sbjct: 762 VRASYRKDAGDAETIFAEARERIRAFKSGITDVEDVDDAERDEDSESDVGEDPEVDVNLK 821

Query: 627 QRRPKYLNCCKSEN-----------NMLTVYME--------------------------- 648
           +  P   N  K EN            + TV M+                           
Sbjct: 822 KEDP---NPLKVENLIGVEPLLENGKLDTVPMKTELGLPLTPSLPEEMKDEKRDDTLADQ 878

Query: 649 --------------IDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRM 694
                          DES  G+ W+ GL+EG+YS+L+ +E+LNALV LI + + G++IR+
Sbjct: 879 SLEDAVANGEDSACFDESKLGEQWVQGLVEGDYSNLSSEERLNALVALIGIATEGNTIRI 938



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 780  STDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEA 835
            + +L+  +S+ LG DRR NRYW F    +  DPG  R++ E  +DG W +ID+EEA
Sbjct: 1065 AEELYVYRSLPLGQDRRRNRYWRFSASASRNDPGCGRIFVE-LQDGRWRLIDSEEA 1119


>gi|15241428|ref|NP_199231.1| Homeodomain-like transcriptional regulator [Arabidopsis thaliana]
 gi|9759519|dbj|BAB10985.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007687|gb|AED95070.1| Homeodomain-like transcriptional regulator [Arabidopsis thaliana]
          Length = 1694

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 157/540 (29%), Positives = 247/540 (45%), Gaps = 116/540 (21%)

Query: 267 KRKPVAKGKQVKLDKGERLRQPNKEK----CELAPDSVISQERLDQIAMLVDDEELELRE 322
           +R+   K + ++ +K  +  +  KEK     + A +  I+++   +   L++DE LEL E
Sbjct: 403 RREKFLKKETIRAEKMRQKEEMRKEKEVARLKAANERAIARKIAKESMELIEDERLELME 462

Query: 323 LEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFK 382
           +            +  + L      RD  A FPP SVK+K+PF  +PW+ S E V  L  
Sbjct: 463 VAALTKGLPSMLALDFETLQNLDEYRDKQAIFPPTSVKLKKPFAVKPWNGSDENVANLLM 522

Query: 383 VFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE-----MELGR 437
           V+ FL T+A ++ +  FTLDEFAQAFHD D  L+G+IH+ LLK ++ D+E     +  G 
Sbjct: 523 VWRFLITFADVLGLWPFTLDEFAQAFHDYDPRLMGEIHIVLLKTIIKDIEGVVRTLSTGV 582

Query: 438 GCPPHLSVSCKFLALLHSVENQ---EFFVEFWNKSLNPLTWTEILRQVLVAAGFGS--KQ 492
           G   +++ +       H VE      F +  W K+LN  TW EILRQ+ ++AG G   K+
Sbjct: 583 GANQNVAANPGG-GHPHVVEGAYAWGFDIRSWRKNLNVFTWPEILRQLALSAGLGPQLKK 641

Query: 493 GSSRKESL--------SKEMILMLKYG------------------------LRPGTLKGE 520
            + R  S+        S+ +I  L+ G                        L PGT+K  
Sbjct: 642 MNIRTVSVHDDNEANNSENVIFNLRKGVAAENAFAKMQERGLSNPRRSRHRLTPGTVKFA 701

Query: 521 LFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYR 580
            F +L  +G  G  + ++A   Q + L   +T+   E  +++ LS D  LFE++A STY 
Sbjct: 702 AFHVLSLEGEKGLNILEVAEKIQKSGLRDLTTSRTPEASVAAALSRDTKLFERVAPSTYC 761

Query: 581 LRINTSKEADD--------------FESDAEDIGSVDDNSDDDDTCSNRDDSECNSENQR 626
           +R +  K+A D              F+S   D+  VDD   D+D+ S+  +      N +
Sbjct: 762 VRASYRKDAGDAETIFAEARERIRAFKSGITDVEDVDDAERDEDSESDVGEDPEVDVNLK 821

Query: 627 QRRPKYLNCCKSEN-----------NMLTVYME--------------------------- 648
           +  P   N  K EN            + TV M+                           
Sbjct: 822 KEDP---NPLKVENLIGVEPLLENGKLDTVPMKTELGLPLTPSLPEEMKDEKRDDTLADQ 878

Query: 649 --------------IDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRM 694
                          DES  G+ W+ GL+EG+YS+L+ +E+LNALV LI + + G++IR+
Sbjct: 879 SLEDAVANGEDSACFDESKLGEQWVQGLVEGDYSNLSSEERLNALVALIGIATEGNTIRI 938



 Score =  104 bits (260), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 162/370 (43%), Gaps = 50/370 (13%)

Query: 780  STDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRAL 839
            + +L+  +S+ LG DRR NRYW F    +  DPG  R++ E  +DG W +ID+EEA   L
Sbjct: 1065 AEELYVYRSLPLGQDRRRNRYWRFSASASRNDPGCGRIFVEL-QDGRWRLIDSEEAFDYL 1123

Query: 840  LSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSP 899
            +  LD RG +E+ L   L K EA   +A+   +  N  +  ++ S               
Sbjct: 1124 VKSLDVRGVRESHLHFMLLKIEASFKEALRRNVAANPGVCSISSS--------------- 1168

Query: 900  VSDVDNNLA-LSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFY--LNL 956
               +D++ A +S   K  L    A+         E+  +  R   F+ W+W++      L
Sbjct: 1169 ---LDSDTAEISTTFKIELGDSNAV---------ERCSVLQRFHSFEKWMWDNMLHPSAL 1216

Query: 957  NAVKHGKRSYLDALARCERCHDLYWRDEKHCKIC---HTTFEL-DFDLEERYAVHAATCR 1012
            +A K+G +        C  C +L++  +  C  C   H   ++ +    E+ A      R
Sbjct: 1217 SAFKYGAKQSSPLFRICRICAELHFVGDICCPSCGQMHAGPDVGELCFAEQVAQLGDNLR 1276

Query: 1013 GKGDHLVSKHKILSS-QLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLA 1071
                  + +  ILS  +++ LK  +  +E+ +P + L   WT++  K W  +L  +SS  
Sbjct: 1277 RGDTGFILRSSILSPLRIRLLKVQLALVEASLPPEGLEAFWTENLRKSWGMKLLSSSSHE 1336

Query: 1072 ELLQVVADFVSAINEGWL------------YQWNVQIADTVMGEIIAFFPTMPQTSSALA 1119
            +L QV+    +A+   +L             Q     +D   G  +   P +P+T+  +A
Sbjct: 1337 DLYQVLTTLEAALKRDFLSSNFETTSELLGLQEGALASDLTCG--VNVLPWIPKTAGGVA 1394

Query: 1120 LWLVKLDAII 1129
            L L   D+ I
Sbjct: 1395 LRLFDFDSSI 1404


>gi|168004355|ref|XP_001754877.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693981|gb|EDQ80331.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 2252

 Score =  189 bits (480), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 171/557 (30%), Positives = 249/557 (44%), Gaps = 90/557 (16%)

Query: 648  EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSI------RMEDPT--- 698
            EIDES  G+ W+ GL+EGEY+DL+++E+LNALV L+ +V+ G++I      R+E  T   
Sbjct: 1347 EIDESQVGEPWVQGLVEGEYADLSVEERLNALVALVTVVNEGNAIRIALEERLEAATALK 1406

Query: 699  -------------------------------KAIAESVPSVRHYGSG-------AKIKRA 720
                                           K   ES P   H  SG        ++   
Sbjct: 1407 RQMWAEMQLEKRRHKEELLSRSHFSLLPGTIKTDGES-PDPEHMTSGTLALYDHGQLDMN 1465

Query: 721  LPNQHSLPRPSWVHA--GDFHGVRETNTSRELHPLD-SFSLISKSCGKEKSSSVKDAKAT 777
            +PN        ++ A  G+     E +     H    S   +S +   EKS +   A   
Sbjct: 1466 MPNTDGT---GYIEAFAGNGKSFNELSNGVVAHEAGPSAGAVSGNHLAEKSRAQAKADIG 1522

Query: 778  EVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALR 837
              + +L+  +S  LGSDRR+NRYW F+      DPG  R++FES+ DG W VIDTEEA  
Sbjct: 1523 LRAEELYVFRSQPLGSDRRHNRYWQFVTGNGGQDPGCGRLFFESNSDGCWGVIDTEEAFD 1582

Query: 838  ALLSVLDDRGRQEALLIESLEKREAFLCQAM---SSGLVNNTEIRHVAQSDQSELDLVRE 894
             LL+ LD RG +EA L   L + E  L Q M   +S   N++ I+           L + 
Sbjct: 1583 VLLASLDPRGAREAALTAILNRLEGTLRQGMRLKASDTANSSPIKGSTTIPNKHPGL-KG 1641

Query: 895  DSSSPVSDVDNNLALSEIGKESLPSC-GAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFY 953
               SPVS +  + +         P+   AI +++GK   EQ +   R +E + WIW+   
Sbjct: 1642 IEESPVSSISGSES-------DSPAVLSAISVELGKTSREQKQALERYKEAEKWIWSECS 1694

Query: 954  LN---LNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEER-YAVHAA 1009
                 L A K G R     L  C+ CH+LY   +KHC+ CH TF  D     R ++ H  
Sbjct: 1695 TGGSALKATKAGLRREARVLVVCDVCHELYTSKDKHCQCCHATF--DKSSSPRVFSEHTR 1752

Query: 1010 TCRGKGDHLVSKHKI------LSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKR 1063
             C  K        K+      + S+LQ LK  +  IES +P  AL   WT    KLW   
Sbjct: 1753 DCEEKRRKCDPNWKLQGPVASMPSRLQLLKTEIIKIESAIPTKALNKDWTDHQRKLWAAS 1812

Query: 1064 LRRTSSLAELLQVVADFVSAINEGWL---YQWNVQIADTVMGE-------IIAFFPTMPQ 1113
            ++  +   ++LQ +    S I   WL   Y+   +IA             +I F+  +P 
Sbjct: 1813 VKAATEPNQVLQALTILESMIERDWLSSTYETTEEIASAAAEANGFGNQGLIPFW--VPP 1870

Query: 1114 TSSALALWLVKLDAIIA 1130
            T++A+AL +  LD  IA
Sbjct: 1871 TTAAVALRIRLLDNAIA 1887



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 198/456 (43%), Gaps = 93/456 (20%)

Query: 256  KQRRLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDD 315
            +Q+R A  L+ + K + K ++    + E  ++    K + A +  +++     +  L+DD
Sbjct: 782  EQKREAERLEKESKRMEKQRR----REEARKEKQAAKLKAANERALAKRLAKDMTDLMDD 837

Query: 316  EELELRELEVG----------PNPPTCCDHISTKGLHGCSLCRD----LLAKFPPNSVKM 361
            EELE  E              P      D      +H    CRD    +L  FPP +V+M
Sbjct: 838  EELERMEASAAASSLNLAFFAPFGKNGMDTSQGTIIHSSYSCRDHLPVVLKPFPPPNVRM 897

Query: 362  KQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHV 421
            K     QPW +S + +  L  V+ FL T+A +V +  FTLDE  QA+HD DS LLG+IHV
Sbjct: 898  KPVVAIQPWSNSDQNIGNLLLVWRFLTTFADVVGLWPFTLDELVQAYHDYDSRLLGEIHV 957

Query: 422  ALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQ--------EFFVEFWNKSLNPL 473
            ALLK L+ D+E E  +     +      +A+      Q         F +  W K +NPL
Sbjct: 958  ALLKTLVRDIE-EAAQAVSGGMVGQRDAIAMAAGGHPQLVEAAFAWGFDIREWGKHVNPL 1016

Query: 474  TWTEILRQVLVAAGFGSK----------------QGSSRKESLSK--------------- 502
            TW EILRQ  +AAGFG K                +G   ++ ++K               
Sbjct: 1017 TWPEILRQFALAAGFGPKWKKRKVLPDRSKEVPAEGEDGEDIVAKLRSGAAAVNAVASMQ 1076

Query: 503  ----EMILMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLARS----------------- 541
                  +   +Y L PGT+K   F +L  +G  G  + Q+A                   
Sbjct: 1077 GRGMGHLRRSQYRLTPGTVKYAAFHVLSLEGEKGLNIAQVADRIQTPDWSSFIEAMTERC 1136

Query: 542  -----SQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFE--- 593
                 SQ + L   S++   E  I++ LS D  LFE+ A STY +R    K+++D E   
Sbjct: 1137 IVLWLSQTSGLRDLSSSRTPEASIAAALSRDTVLFERTAPSTYCVRPQFRKDSEDAEEIL 1196

Query: 594  -SDAEDI-----GSVDDNSDDDDTCSNRDDSECNSE 623
             +  E I     G VD  +D D   ++R++ E   +
Sbjct: 1197 SAARERIRLFRSGLVDGEADKDVDEADREEYESEGQ 1232



 Score = 44.3 bits (103), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 35/50 (70%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           KTP+Q +AL + ++E++YP ++    L+  L+L+ KQ++ WF  +R +D+
Sbjct: 318 KTPVQLEALERVFAEDRYPAEAVRAELSTQLNLSDKQLQMWFCHRRLKDR 367


>gi|115473393|ref|NP_001060295.1| Os07g0619600 [Oryza sativa Japonica Group]
 gi|33146625|dbj|BAC79913.1| unknown protein [Oryza sativa Japonica Group]
 gi|33146879|dbj|BAC79877.1| unknown protein [Oryza sativa Japonica Group]
 gi|113611831|dbj|BAF22209.1| Os07g0619600 [Oryza sativa Japonica Group]
 gi|215693812|dbj|BAG89011.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 330

 Score =  186 bits (473), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/343 (39%), Positives = 174/343 (50%), Gaps = 43/343 (12%)

Query: 118 QDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCPPLQENQTAKRKRKVSI 177
           Q L   DYIL+KVFRKDGPPLG EFD LP  A    +D+ +      +NQ   +KRK+  
Sbjct: 17  QVLFPKDYILRKVFRKDGPPLGSEFDPLPHSAPGHLRDTTDDH--FYQNQRVIKKRKIVE 74

Query: 178 HDELDHQECCTNTDHVRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATPL 237
                    C +   VRKHG GKGLMT W  M  +   +  G +  D   T   +   PL
Sbjct: 75  PTTQRSSLPCGDNGPVRKHGAGKGLMTVWHAMYSHSSKIQDGSNFIDE--TGCLRSLRPL 132

Query: 238 SQKPPLRKKRAQQIVSLLKQRRLANNLQSKR-KPVAKGKQVKLDKGERLRQPNKE---KC 293
                  +        L++++ LA     KR +P +  ++V      R+  P K    +C
Sbjct: 133 DD---CGRIEDCDDGKLIQKKVLARKKVVKRTRPPSNKRKVP---SSRVTDPKKHPPMEC 186

Query: 294 ELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAK 353
            L+ D   S         LVDDEELELREL+ GPNP  C  H+S+ G HGC LC+DLL++
Sbjct: 187 HLSVDESQSPVLQANQVTLVDDEELELRELQAGPNPLRCSAHLSSSGRHGCPLCKDLLSR 246

Query: 354 FPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDS 413
           FPP+SVKMKQPF T+PW SSPE VKKLF                             +DS
Sbjct: 247 FPPSSVKMKQPFSTRPWGSSPEMVKKLF-----------------------------QDS 277

Query: 414 MLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSV 456
           MLLG++HV LLKLLL + E        P  S  C+FL+ ++ V
Sbjct: 278 MLLGEVHVNLLKLLLLNTERGSNDVFVPRSSKDCRFLSFVNFV 320


>gi|124360728|gb|ABN08705.1| DDT; Homeodomain-related [Medicago truncatula]
          Length = 1795

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/325 (36%), Positives = 167/325 (51%), Gaps = 43/325 (13%)

Query: 312 LVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWD 371
           L++DE+LEL EL       +   HI    L      RD L  FPP SVK+K+PF  QPW 
Sbjct: 508 LIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCVFPPKSVKLKKPFAIQPWI 567

Query: 372 SSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDV 431
           +S + V  L  V+ FL T+A  +++  FTLDEF QAFHD DS LLG+IHVA+LK+++ D+
Sbjct: 568 NSEQDVGNLLMVWRFLITFADALELWPFTLDEFVQAFHDYDSRLLGEIHVAVLKMIIKDI 627

Query: 432 EMELGRGCPPHLSVSCKFLA--------LLHSVENQEFFVEFWNKSLNPLTWTEILRQVL 483
           E ++ R     L V+    A        ++       F +  W K+LN LTW EILRQ+ 
Sbjct: 628 E-DVARTPSTGLGVNQNGAANPAGGHPEIVEGAYTWGFDIRNWQKNLNQLTWPEILRQLA 686

Query: 484 VAAGFGS----------------------------KQGSSRKESLSK--EMILML----K 509
           ++AGFG                             + GS+   +++K  E  L+     +
Sbjct: 687 LSAGFGPQLKKRSITWSCANDKEEGRSGDDVISTLRNGSAAVSAVAKMREKGLLAPRRSR 746

Query: 510 YGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDIT 569
           + L PGT+K   F +L  +G  G  V +LA   Q + L   +T++  E  IS  L+ D  
Sbjct: 747 HRLTPGTVKFAAFHVLSLEGPKGLNVLELAEKIQKSGLRDLTTSKTPEASISVALTRDGK 806

Query: 570 LFEKIASSTYRLRINTSKEADDFES 594
           LFE+IA STYR+R    ++  D ES
Sbjct: 807 LFERIAPSTYRVRTAFRQDPADAES 831



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 170/656 (25%), Positives = 284/656 (43%), Gaps = 115/656 (17%)

Query: 593  ESDAEDIGSVDDNSDDDDTC---SNRDDSECNSENQRQRRPKYLNCCKSENNMLTVYMEI 649
            E+ A D+  + +  D D  C   +   D++C +   RQ     + C       L   MEI
Sbjct: 901  ENLANDVDLIQNKLDTDLPCFPENGSKDADCPTSVTRQP----VACENLNARNLDDNMEI 956

Query: 650  DESHRGDVWLSGLMEGEYSDLTIDEKLNAL---VGL------------------------ 682
            DES  G+ W+ GL EGEYSDL+++E+LNAL   VG+                        
Sbjct: 957  DESKSGEPWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRIILEDRLEAANALKKQ 1016

Query: 683  ------IDLVS--------------AGSSIRMEDPTKAIAES--------VPSVRHYGS- 713
                  ID V               AG+    +D   A+  +        + ++++  S 
Sbjct: 1017 MWAEAQIDKVRLKDDYISKLDFPSLAGNKFETQDTYPAVEGNQSPLLDININNIKNEASP 1076

Query: 714  -GAKIKRALPNQHSLPRPSWVHAGDF-HGVRETNTSRELHPLDSFSLISKSCGKEKSSSV 771
              A+ +R  P+  SL     + A DF  G    N+  ++H   S          ++S S 
Sbjct: 1077 STAENQRGAPSAQSLLIEKPLVAHDFCPGTGPDNSQSQMHAQYS----------KRSRSQ 1126

Query: 772  KDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVID 831
              +  + ++ +++  +S+ LG DRR NRYW F+   +  DPG  R++ E   DG W +ID
Sbjct: 1127 LKSYISHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVE-HHDGSWRLID 1185

Query: 832  TEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDL 891
            +EEA   LL+ LD RG +E+ L   L+K E    ++    +  NT+   +    +  +  
Sbjct: 1186 SEEAFDILLTSLDSRGIRESHLRLMLQKIE----KSFKENVRKNTQCTKIGSKGEGSMK- 1240

Query: 892  VREDSSSPVSD-----VDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDA 946
               D + PV +        +  L E+   +  +  +  +++GK   E+     R Q+F  
Sbjct: 1241 TEADETYPVPEHLSGSGSPSSTLHELNSGTSETSSSFKIELGKSENEKKAALRRYQDFQK 1300

Query: 947  WIWNSFYLN--LNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERY 1004
            W+W   Y +  L A+K G +     +  CE C D Y+ ++ HC  CH TF  + +     
Sbjct: 1301 WMWKECYNSSILCAIKFGVKRCKPQVDICEICLDPYFMEDSHCNSCHQTFPSNNEF--NI 1358

Query: 1005 AVHAATCRGKGDHLVSKHKI-LSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKR 1063
            + H   C G     + +H + L ++L  LK  +  +E+ +  +A    WT    K W  +
Sbjct: 1359 SKHTFQCVGNLSKDIMEHSLPLRTRL--LKVLLSCMEASVLSEAFGTIWTTDFRKHWGVK 1416

Query: 1064 LRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMG---------------EIIAFF 1108
            L ++S++ ELLQ++  F  A+   +L   N    D ++G               E +A  
Sbjct: 1417 LNKSSTVEELLQMLTLFEKALRRDFLSS-NFSTTDELLGLSSMSKSAAHVSADPESVALL 1475

Query: 1109 PTMPQTSSALALWLVKLDAIIAPY-LERV-----NSGKEDARMRCRGIFLFPQRPF 1158
            P +P T++AL+L L + D+ I+   LER+         E  R+  R     P R F
Sbjct: 1476 PWVPLTTAALSLRLFEFDSSISYVKLERLEPVEEKEATEYIRLPSRYTPFKPNREF 1531



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 48/173 (27%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           KTP Q + L K Y+ E YP+++    L+  L L+ +Q++ WF  +R +DK +    +P  
Sbjct: 47  KTPFQLEMLEKAYALETYPSETTRIELSEKLGLSDRQLQMWFCHRRLKDKKE----LPVK 102

Query: 66  SSKKLKGFHGRNRLGVVSAKIVKKQDSLIH--NKHLSLMVCN------------------ 105
            ++K                     DS  H  N  L L  CN                  
Sbjct: 103 KARKAPPL----------------LDSPTHEPNPKLILEPCNEYGSGSGSGSSPFARTEL 146

Query: 106 --------GTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
                      +    +  L+ +   +  L +  R+DGP LG+EFD LP  AF
Sbjct: 147 RNVVPPPRSYYESPQTIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAF 199


>gi|357446737|ref|XP_003593644.1| Homeobox protein Hox-C4 [Medicago truncatula]
 gi|355482692|gb|AES63895.1| Homeobox protein Hox-C4 [Medicago truncatula]
          Length = 1796

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/325 (36%), Positives = 167/325 (51%), Gaps = 43/325 (13%)

Query: 312 LVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWD 371
           L++DE+LEL EL       +   HI    L      RD L  FPP SVK+K+PF  QPW 
Sbjct: 508 LIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCVFPPKSVKLKKPFAIQPWI 567

Query: 372 SSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDV 431
           +S + V  L  V+ FL T+A  +++  FTLDEF QAFHD DS LLG+IHVA+LK+++ D+
Sbjct: 568 NSEQDVGNLLMVWRFLITFADALELWPFTLDEFVQAFHDYDSRLLGEIHVAVLKMIIKDI 627

Query: 432 EMELGRGCPPHLSVSCKFLA--------LLHSVENQEFFVEFWNKSLNPLTWTEILRQVL 483
           E ++ R     L V+    A        ++       F +  W K+LN LTW EILRQ+ 
Sbjct: 628 E-DVARTPSTGLGVNQNGAANPAGGHPEIVEGAYTWGFDIRNWQKNLNQLTWPEILRQLA 686

Query: 484 VAAGFGS----------------------------KQGSSRKESLSK--EMILML----K 509
           ++AGFG                             + GS+   +++K  E  L+     +
Sbjct: 687 LSAGFGPQLKKRSITWSCANDKEEGRSGDDVISTLRNGSAAVSAVAKMREKGLLAPRRSR 746

Query: 510 YGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDIT 569
           + L PGT+K   F +L  +G  G  V +LA   Q + L   +T++  E  IS  L+ D  
Sbjct: 747 HRLTPGTVKFAAFHVLSLEGPKGLNVLELAEKIQKSGLRDLTTSKTPEASISVALTRDGK 806

Query: 570 LFEKIASSTYRLRINTSKEADDFES 594
           LFE+IA STYR+R    ++  D ES
Sbjct: 807 LFERIAPSTYRVRTAFRQDPADAES 831



 Score =  174 bits (441), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 170/657 (25%), Positives = 285/657 (43%), Gaps = 116/657 (17%)

Query: 593  ESDAEDIGSVDDNSDDDDTC---SNRDDSECNSENQRQRRPKYLNCCKSENNMLTVYMEI 649
            E+ A D+  + +  D D  C   +   D++C +   RQ     + C       L   MEI
Sbjct: 901  ENLANDVDLIQNKLDTDLPCFPENGSKDADCPTSVTRQP----VACENLNARNLDDNMEI 956

Query: 650  DESHRGDVWLSGLMEGEYSDLTIDEKLNAL---VGL------------------------ 682
            DES  G+ W+ GL EGEYSDL+++E+LNAL   VG+                        
Sbjct: 957  DESKSGEPWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRIILEDRLEAANALKKQ 1016

Query: 683  ------IDLVS--------------AGSSIRMEDPTKAIAES--------VPSVRHYGS- 713
                  ID V               AG+    +D   A+  +        + ++++  S 
Sbjct: 1017 MWAEAQIDKVRLKDDYISKLDFPSLAGNKFETQDTYPAVEGNQSPLLDININNIKNEASP 1076

Query: 714  -GAKIKRALPNQHSLPRPSWVHAGDF-HGVRETNTSRELHPLDSFSLISKSCGKEKSSSV 771
              A+ +R  P+  SL     + A DF  G    N+  ++H   S          ++S S 
Sbjct: 1077 STAENQRGAPSAQSLLIEKPLVAHDFCPGTGPDNSQSQMHAQYS----------KRSRSQ 1126

Query: 772  KDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVID 831
              +  + ++ +++  +S+ LG DRR NRYW F+   +  DPG  R++ E   DG W +ID
Sbjct: 1127 LKSYISHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVE-HHDGSWRLID 1185

Query: 832  TEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDL 891
            +EEA   LL+ LD RG +E+ L   L+K E    ++    +  NT+   +    +  +  
Sbjct: 1186 SEEAFDILLTSLDSRGIRESHLRLMLQKIE----KSFKENVRKNTQCTKIGSKGEGSMK- 1240

Query: 892  VREDSSSPVSD-----VDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDA 946
               D + PV +        +  L E+   +  +  +  +++GK   E+     R Q+F  
Sbjct: 1241 TEADETYPVPEHLSGSGSPSSTLHELNSGTSETSSSFKIELGKSENEKKAALRRYQDFQK 1300

Query: 947  WIWNSFYLN--LNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERY 1004
            W+W   Y +  L A+K G +     +  CE C D Y+ ++ HC  CH TF  + +     
Sbjct: 1301 WMWKECYNSSILCAIKFGVKRCKPQVDICEICLDPYFMEDSHCNSCHQTFPSNNEF--NI 1358

Query: 1005 AVHAATCRGKGDHLVSKHKI-LSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKR 1063
            + H   C G     + +H + L ++L  LK  +  +E+ +  +A    WT    K W  +
Sbjct: 1359 SKHTFQCVGNLSKDIMEHSLPLRTRL--LKVLLSCMEASVLSEAFGTIWTTDFRKHWGVK 1416

Query: 1064 LRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMG---------------EIIAFF 1108
            L ++S++ ELLQ++  F  A+   +L   N    D ++G               E +A  
Sbjct: 1417 LNKSSTVEELLQMLTLFEKALRRDFLSS-NFSTTDELLGLSSMSKSAAHVSADPESVALL 1475

Query: 1109 PTMPQTSSALALWLVKLDAIIAPY-LERVNSGKED------ARMRCRGIFLFPQRPF 1158
            P +P T++AL+L L + D+ I+   LER+   +E        R+  R     P R F
Sbjct: 1476 PWVPLTTAALSLRLFEFDSSISYVKLERLEPVEEKEATEYIQRLPSRYTPFKPNREF 1532



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 48/173 (27%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           KTP Q + L K Y+ E YP+++    L+  L L+ +Q++ WF  +R +DK +    +P  
Sbjct: 47  KTPFQLEMLEKAYALETYPSETTRIELSEKLGLSDRQLQMWFCHRRLKDKKE----LPVK 102

Query: 66  SSKKLKGFHGRNRLGVVSAKIVKKQDSLIH--NKHLSLMVCN------------------ 105
            ++K                     DS  H  N  L L  CN                  
Sbjct: 103 KARKAPPL----------------LDSPTHEPNPKLILEPCNEYGSGSGSGSSPFARTEL 146

Query: 106 --------GTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
                      +    +  L+ +   +  L +  R+DGP LG+EFD LP  AF
Sbjct: 147 RNVVPPPRSYYESPQTIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAF 199


>gi|242053943|ref|XP_002456117.1| hypothetical protein SORBIDRAFT_03g030785 [Sorghum bicolor]
 gi|241928092|gb|EES01237.1| hypothetical protein SORBIDRAFT_03g030785 [Sorghum bicolor]
          Length = 815

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 224/486 (46%), Gaps = 63/486 (12%)

Query: 259 RLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEEL 318
           R+   LQ + +   K +Q +  + E+     K   E A    I++E ++    LV+DE L
Sbjct: 143 RMEKLLQKQSRRAEKQRQKEELRKEKEAARQKAANERATARRIAREYME----LVEDERL 198

Query: 319 ELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVK 378
           EL EL           H+ +  L      R +L +FPP +V++K PF  +PW  S + V 
Sbjct: 199 ELMELAAQNKGLPSMLHLDSDTLQQLDSFRGMLRQFPPATVRLKLPFSIKPWTGSEDNVG 258

Query: 379 KL----------------FKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVA 422
           KL                 +V+ F  T+  ++ +C  TLDEF Q+ HD DS LLG++HVA
Sbjct: 259 KLLMVMLYSSYKTFLLTELQVWKFFITFTDVLGLCPVTLDEFVQSLHDYDSRLLGELHVA 318

Query: 423 LLKLLLSDVEMELGRGCPPHLSVS-CKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQ 481
           LLK ++ D+E ++ R     L V+      ++       F +  W + LN LTW EILRQ
Sbjct: 319 LLKSIIKDIE-DVARTQSIALGVNPGGHPQIVEGAYAWGFNIRSWQRHLNLLTWPEILRQ 377

Query: 482 VLVAAGFGSKQGSSRKESL----------SKEMILMLKYG-------------------- 511
             ++AGFG +      E             + +I  L+ G                    
Sbjct: 378 FALSAGFGPQLKKRTVEDSYYRNDNEGHDGENVISTLRNGSAAVNAAAKMKERGYTNRRR 437

Query: 512 ----LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSD 567
               L PGT+K   F +L  +G+ G  + ++A   Q + L   +T++  E  I++ LS D
Sbjct: 438 SRHRLTPGTVKFAAFHVLSLEGSKGLTILEVAEKIQKSGLRDLTTSKTPEASIAAALSRD 497

Query: 568 ITLFEKIASSTYRLRINTSKEADDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSENQRQ 627
             LFE+ A STY ++         +  D  D  +V   + +         S+  +E +  
Sbjct: 498 TKLFERTAPSTYCVK-------SPYRKDPADSEAVLSAAREKIRAFQNVLSDSEAEKEAD 550

Query: 628 RRPKYLNCCKSENNMLTVYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVS 687
              +  +    + +      +IDES++ + W+  L EG+Y DL+++E+LNALV L+ + +
Sbjct: 551 EAERDDDSECDDADDDPDDTQIDESNQVEPWVRALAEGDYYDLSVEERLNALVALVGVAT 610

Query: 688 AGSSIR 693
            G+SIR
Sbjct: 611 EGNSIR 616



 Score = 44.7 bits (104), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)

Query: 783 LHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHW 827
           L+  +S+ LG DRR NRYW F    +  D G  R++FE S+DG W
Sbjct: 753 LYVYRSLPLGQDRRRNRYWQFTTSASPNDLGSGRIFFE-SKDGCW 796


>gi|222619025|gb|EEE55157.1| hypothetical protein OsJ_02965 [Oryza sativa Japonica Group]
          Length = 1779

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 180/676 (26%), Positives = 289/676 (42%), Gaps = 136/676 (20%)

Query: 265 QSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELE 324
           QS+R    + K+    + E  RQ  K   E A    I++E ++    LV+DE LEL EL 
Sbjct: 240 QSRRAEKQRQKEELRKEKEAARQ--KAANERATARRIAREYME----LVEDECLELMELA 293

Query: 325 VGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLF--- 381
                      + +  L      R +L  FPP  V++K+PF  +PW  S + V  L    
Sbjct: 294 AQSKGLPSMLSLDSDTLQQLDSFRGMLTPFPPEPVRLKEPFSIKPWTVSEDNVGNLLMTH 353

Query: 382 --------------------KVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHV 421
                               +V+ F  T+A ++ + S T DEF Q+ HD DS LLG++H+
Sbjct: 354 ILSMQMDKQIDLFDTLASLHQVWKFSITFADVLGLSSVTFDEFVQSLHDYDSRLLGELHI 413

Query: 422 ALLKLLLSDVEMELGRGCPPHLSV--SCKFLALLHSVENQEFFVEFWNKSLNPLTWTEIL 479
           ALLK ++ D+E ++ R     L+V  +     ++       F +  W + LN LTW EIL
Sbjct: 414 ALLKSIIKDIE-DVSRTPSVALAVNPAGGHPQIVEGAYAWGFNIRSWQRHLNVLTWPEIL 472

Query: 480 RQVLVAAGFGSKQGSSRKESL----------SKEMILMLKYG------------------ 511
           RQ  ++AGFG +      E +           +++I  L+ G                  
Sbjct: 473 RQFALSAGFGPQLKKRNAEDVYYRDDNEGHDGQDVISTLRNGSAAVHAAALMKERGYTHR 532

Query: 512 ------LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLS 565
                 L PGT+K   F +L  +G+ G  + ++A   Q + L   +T++  E  I++ LS
Sbjct: 533 RRSRHRLTPGTVKFAAFHVLSLEGSKGLTILEVAERIQKSGLRDLTTSKTPEASIAAALS 592

Query: 566 SDITLFEKIASSTYRLRINTSKEADDFE----SDAEDIGSVDDNSDDDDTCSNRDDSE-- 619
            D  LFE+ A STY ++    K+  D E    S  E I +  +   D +     +D+E  
Sbjct: 593 RDTKLFERTAPSTYCVKSPYRKDPADSEVVLSSAREKIRAFQNVISDSEAEKEANDAERD 652

Query: 620 -----CNSENQRQRRPKYLNC-------CKSENNMLTVY----MEIDESHRGDVWLSGLM 663
                 ++++    +P   N          SE + +        EIDES++G+ W+ GL 
Sbjct: 653 EDSECDDADDDPDGKPSSANTSSDSPVRASSEYHEVPPTDAEDKEIDESNQGESWVHGLA 712

Query: 664 EGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MED--------PTKAIAESVPSVR---- 709
           EG+Y DL+++E+LNALV L+ + + G+ IR  +E+          + +AE+    R    
Sbjct: 713 EGDYCDLSVEERLNALVALVSVANEGNFIRAVLEERLESANALKKQMLAEAQLDKRRSKE 772

Query: 710 ------HYGSGAKIKRALPNQHSL-PRPSWVHAGDFHGVRET------------------ 744
                  Y S   +K  +  +++    P+  H  D H    T                  
Sbjct: 773 EFAGRVQYNSNMNLKADVNQENATESTPTPFHNVDKHNDGNTGVVDNNNNEIIDHNSNAA 832

Query: 745 NTSRELHPL--------DSFSLISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRR 796
           N S E + L        D+ S + +    +K+ S   A     +  L   +S+ LG DRR
Sbjct: 833 NASYERNGLGQDIAATPDTLS-VQQYAYADKTRSQLRAYIGHRAEQLFVYRSLPLGQDRR 891

Query: 797 YNRYWLFLGPCNEYDP 812
            NRYW F    +  DP
Sbjct: 892 RNRYWQFSTSASPNDP 907



 Score =  168 bits (426), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 157/585 (26%), Positives = 265/585 (45%), Gaps = 92/585 (15%)

Query: 648  EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MED--------P 697
            EIDES++G+ W+ GL EG+Y DL+++E+LNALV L+ + + G+ IR  +E+         
Sbjct: 946  EIDESNQGESWVHGLAEGDYCDLSVEERLNALVALVSVANEGNFIRAVLEERLESANALK 1005

Query: 698  TKAIAESVPSVR----------HYGSGAKIKRALPNQHSL-PRPSWVHAGDFHGVRET-- 744
             + +AE+    R           Y S   +K  +  +++    P+  H  D H    T  
Sbjct: 1006 KQMLAEAQLDKRRSKEEFAGRVQYNSNMNLKADVNQENATESTPTPFHNVDKHNDGNTGV 1065

Query: 745  ----------------NTSRELHPL--------DSFSLISKSCGKEKSSSVKDAKATEVS 780
                            N S E + L        D+ S + +    +K+ S   A     +
Sbjct: 1066 VDNNNNEIIDHNSNAANASYERNGLGQDIAATPDTLS-VQQYAYADKTRSQLRAYIGHRA 1124

Query: 781  TDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALL 840
              L   +S+ LG DRR NRYW F    +  DPG  R++FE   DG+W V+DTEEA  +L+
Sbjct: 1125 EQLFVYRSLPLGQDRRRNRYWQFSTSASPNDPGSGRIFFEC-RDGYWRVLDTEEAFDSLV 1183

Query: 841  SVLDDRGRQEALLIESLEKREAFLCQAM---SSGLVNNTEIRHVAQSDQSELDL-VREDS 896
            + LD RG +EA L   L++ E    +A+    S +V  +  R++       +    R D 
Sbjct: 1184 ASLDTRGSREAQLHSMLQRIEPTFKEAIKRKKSAVVEQSAGRYLKNGATEMIRASYRSDF 1243

Query: 897  SSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIW---NSFY 953
             SP S++    + S I         +  +++G+   E+  +  R   F  W+W   N   
Sbjct: 1244 GSPSSNLSGVTSDSAIAY-----SDSFKIELGRNDVEKTAISKRADVFIRWMWRECNDCK 1298

Query: 954  LNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRG 1013
            L   A+++GK+   + +  C  C+ +Y  +E+HC  CH  F+   +    ++ HA+ C+ 
Sbjct: 1299 LTC-AMEYGKKRCSELMHSCNYCYQIYLAEERHCSSCHKNFKSIHN----FSDHASQCKD 1353

Query: 1014 K--GDH---LVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTS 1068
            K   DH   + +    +   ++ LK  +  IE+ +P +A+   WT    K W  +L  T+
Sbjct: 1354 KLRTDHNWKMQTADHSVPIGVRLLKLQLSTIEASIPPEAIQPFWTDGYRKSWGVKLHSTT 1413

Query: 1069 SLAELLQVVADFVSAINEGWL--------------YQWNVQIADTVMGEIIAFFPTMPQT 1114
            SL E+ Q++    +AI    L               Q N       +    A  P +P T
Sbjct: 1414 SLEEIFQMLTLLEAAIKRDHLSSEFETTSELLNLNTQDNPSQNHVGLSGSAAVLPWVPDT 1473

Query: 1115 SSALALWLVKLDAIIAPYLERVNSGKEDARMRCRGIFLFPQRPFI 1159
            ++A+AL ++ LD+ ++ Y++  N   E    R  G F+ P   F+
Sbjct: 1474 TAAIALRMLDLDSAVS-YMQ--NQKME----RNGGDFMKPPSRFV 1511


>gi|449531460|ref|XP_004172704.1| PREDICTED: uncharacterized LOC101224723, partial [Cucumis sativus]
          Length = 229

 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 88/190 (46%), Positives = 124/190 (65%), Gaps = 2/190 (1%)

Query: 193 VRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATPLSQKPPLRKKRAQQIV 252
           ++ HG+GKGLMT W+  NP+ G  P       ++   V  ++T  S+    + KR  +  
Sbjct: 42  IKTHGIGKGLMTVWQATNPDAGDFPARTIFGGQKFMDVSPVSTSSSEHSLRQGKRPPRQA 101

Query: 253 SLLKQRRLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAML 312
            +  + R+ + +Q KRKP+ K ++V+ ++    +Q   EKCELA + + SQE +DQ A+L
Sbjct: 102 KM--KGRVGSKVQGKRKPLIKTRRVECNEENSQKQLCYEKCELAWEGIKSQECIDQFAVL 159

Query: 313 VDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDS 372
           VDDEELEL+EL+   +  T CDH  T G++ CSLC+D+LAKFPPNSVKMKQPFG QPWDS
Sbjct: 160 VDDEELELKELQARKHIITSCDHFMTNGVNSCSLCKDMLAKFPPNSVKMKQPFGMQPWDS 219

Query: 373 SPETVKKLFK 382
           S +  KKLFK
Sbjct: 220 SRDICKKLFK 229


>gi|224077058|ref|XP_002305113.1| predicted protein [Populus trichocarpa]
 gi|222848077|gb|EEE85624.1| predicted protein [Populus trichocarpa]
          Length = 1440

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/335 (34%), Positives = 171/335 (51%), Gaps = 47/335 (14%)

Query: 290 KEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRD 349
           K   E A    I+++ LD    L++DE+LEL EL           +++   L      RD
Sbjct: 432 KAAMEKATARKIAKDSLD----LIEDEQLELMELAAASKGLASIVNLNYDTLQNLDSFRD 487

Query: 350 LLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFH 409
           LL  FP  SV++K+PFG QPW  S E +  L  V+ F  T+A ++ +  FTLDEF QAFH
Sbjct: 488 LLITFPSESVQLKKPFGFQPWLDSEENIGNLLMVWRFFITFADVLGLWPFTLDEFVQAFH 547

Query: 410 DKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLA--------LLHSVENQEF 461
           D DS LL ++HVALLKL++ D+E ++ R     L ++  + A        ++       F
Sbjct: 548 DYDSRLLSELHVALLKLIIKDIE-DVARTPSIGLGINQYYTANPEGGHPQIVQGAYTWGF 606

Query: 462 FVEFWNKSLNPLTWTEILRQVLVAAGFGS----------------------------KQG 493
            +  W + LNPLTW EILRQ+ ++AGFG                             + G
Sbjct: 607 DIRNWQQHLNPLTWPEILRQLALSAGFGPQLRKRNATWTGLGDIDEVKDCEDIISTIRNG 666

Query: 494 SSRKES--LSKEMILML----KYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAEL 547
           S+ + +  L +E  L+L    ++ L PGT+K   F +L  +G+ G  V +LA   Q + L
Sbjct: 667 SAAENAFALMREKGLLLPRKSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELADKIQKSGL 726

Query: 548 NLESTTEEVELLISSTLSSDITLFEKIASSTYRLR 582
              +T++  E  IS  L+ D  LFE+IA STY +R
Sbjct: 727 RDLTTSKTPEASISVALTRDQKLFERIAPSTYCVR 761



 Score =  140 bits (352), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 185/398 (46%), Gaps = 40/398 (10%)

Query: 754  DSFSLISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPG 813
            D+ S+       ++S S   A  T ++ +L+  +S+ LG DRR NRYW F+   +  DP 
Sbjct: 1052 DNISVQQHGYASKRSRSQLKAYVTHLAEELYIYRSLPLGQDRRRNRYWQFVASASRNDPC 1111

Query: 814  HKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLV 873
              R++ E   DG+W VID+EEA   LLS LD RG +E+ L   L+K E+   +     L 
Sbjct: 1112 SGRIFVE-LHDGNWRVIDSEEAFDTLLSSLDTRGVRESHLRIMLQKIESSFKENGRRNLW 1170

Query: 874  NNTEIRHVAQSDQSELDLVREDSSSPVSDVDNNLALSEI-GKESLPSCGAIVLDVGKKGE 932
            +   +     +D+++      DS +  +D+D+  ++  +   ++  +     +++G+   
Sbjct: 1171 SPNIVCQSGTTDENK--KAETDSGNCPADIDDPSSMFCVSSSDTFDTFSLFRIELGRNSA 1228

Query: 933  EQHRMWSRLQEFDAWIWNSFY--LNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKIC 990
            E+     R  +F  W+W   +    L A+K GK+     L  C  C   Y  ++ HC  C
Sbjct: 1229 EKKGALKRYLDFQNWMWKDCFNSSTLRAMKFGKKRCEQLLDTCNLCFSSYLSEDTHCLSC 1288

Query: 991  HTTFELDFDLEERYAVHAA----TCRGKGDHLVSKHKILSSQLQSLKAAVHAIESVMPED 1046
            H TF++    E+R+    A    +C   G  L             L A + +IE  +P++
Sbjct: 1289 HQTFKIQCK-EKRFDPGNARAFDSCLPLGIRL-------------LTALLGSIEVSVPQE 1334

Query: 1047 ALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMGE--- 1103
            AL   W +   K WV +L  +SS  ELLQ +  F SAI    L   N +    ++G    
Sbjct: 1335 ALESFWMEICRKDWVVKLIMSSSTEELLQRLTVFESAIKRERLSS-NFETTKELLGPSAS 1393

Query: 1104 ------------IIAFFPTMPQTSSALALWLVKLDAII 1129
                         ++  P MP+T +A+AL L +LDA I
Sbjct: 1394 SGSAARDSASLGSVSLLPWMPKTIAAVALRLFELDASI 1431



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 2/63 (3%)

Query: 640 NNMLTVYMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MEDP 697
           NN     +EIDES  G  W+ GL EGEYS L+++E+LNALV L+ + + G+SIR  +ED 
Sbjct: 889 NNGDGQNIEIDESKSGASWIQGLTEGEYSHLSVEERLNALVVLVGIANEGNSIRSVLEDR 948

Query: 698 TKA 700
            +A
Sbjct: 949 LEA 951



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 17/158 (10%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGD-------N 58
           KTP Q + L K Y+ E YP++     L+  L L+ +Q++ WF  +R +DK +       N
Sbjct: 18  KTPFQLETLEKAYATETYPSEEMRAELSEKLGLSDRQLQMWFCHRRLKDKKETPVKKQRN 77

Query: 59  GIVIPSSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKK------N 112
              +P S  + ++     N     S             K   +++ +G   ++       
Sbjct: 78  TAPLPESPLEDMR-IGAENGSDYGSGSGSGSSPLSESRK---VILDDGHTMRRYYDSSPQ 133

Query: 113 AVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
           +V  L+ +   +  L +  R+DGP LG+EFD LP  AF
Sbjct: 134 SVMELRAIACVEAQLGEPLREDGPILGMEFDPLPPDAF 171


>gi|449479573|ref|XP_004155639.1| PREDICTED: uncharacterized protein LOC101230914 [Cucumis sativus]
          Length = 1750

 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 187/381 (49%), Gaps = 51/381 (13%)

Query: 264 LQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELELREL 323
           LQ +     K KQ +  + E+     K   E A    I++E ++    L++DE+LEL EL
Sbjct: 436 LQREYLRAEKRKQKEAIRKEKEAVRRKAAIEKATARRIARESME----LIEDEQLELMEL 491

Query: 324 EVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKV 383
                  +   ++    L      RD L  FPP SV++K+PFG QPW +S E +  L  V
Sbjct: 492 AAANKGLSSILNLDHDTLQNLESFRDYLGAFPPKSVQLKKPFGIQPWVNSEENIGNLLMV 551

Query: 384 FHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHL 443
           + F  T++ ++++  FTLDEF QA HD DS LL +IH+ LL+L++ D+E ++ R     +
Sbjct: 552 WRFFITFSDVLELWPFTLDEFVQALHDYDSRLLAEIHICLLRLIVKDIE-DVARTPSTGM 610

Query: 444 SVSCKFLA--------LLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFG------ 489
            ++   +A        ++       F +  W K LNPLTW EI RQ+ ++AG G      
Sbjct: 611 GMNQNGVANSGGGHPQIVEGAYAWGFDICNWQKHLNPLTWPEIFRQLALSAGHGPQLKKR 670

Query: 490 ----SKQGSSRKESLSKEMILMLKYG------------------------LRPGTLKGEL 521
               S+  S  +    ++++  L+ G                        L PGT+K   
Sbjct: 671 SLAMSEMRSKDEAKCGEDVVSTLRNGSAAENAFAIMQEKGLLAPRRSRHRLTPGTVKFAA 730

Query: 522 FRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRL 581
           F +L  +G+ G  V +LA   Q + L   ST++  E  IS  L+ D  LFE+IA STYR+
Sbjct: 731 FHVLSLEGSEGLTVLELAEKIQRSGLRDLSTSKTPEASISVALTRDTKLFERIAPSTYRV 790

Query: 582 RINTSKEADDFESDAEDIGSV 602
           R    K+ D    DA++I SV
Sbjct: 791 RAPYRKDPD----DADEILSV 807



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 244/547 (44%), Gaps = 73/547 (13%)

Query: 647  MEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MEDPTKAIAES 704
            MEIDES  G+ W+ GL EGEY DL+++E+LNALV L  + + G+SIR  +ED  +A A +
Sbjct: 925  MEIDESKEGESWIQGLTEGEYHDLSVEERLNALVVLTSIANEGNSIRLVLEDRLEA-ANA 983

Query: 705  VPS---VRHYGSGAKIKRALPNQHSLP-----------RPSWVHAG-------DFHGVRE 743
            V            +++K  +  +   P             S +  G       D      
Sbjct: 984  VKKQMLTEAQIDKSRLKEEIITKSDFPIHIVSKVEIELNGSTMDGGQSPFPVADNKNNET 1043

Query: 744  TNTSRELH---PLDSFSLI-----------SKSCG--KEKSSSVKDAKATEVSTDLHPMQ 787
            T ++ E H   P +  +L+           ++ CG   ++S S   +     + +++  +
Sbjct: 1044 TPSTAENHSSVPNERGTLVPDLFPGPDNFLAQQCGHASKRSRSQLKSYIAHRAEEMYTYR 1103

Query: 788  SIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRG 847
            S+ LG DRR NRYW F+   +  DPG  R++ E   DG+W +ID+EE   AL   LD RG
Sbjct: 1104 SLPLGRDRRRNRYWQFVASSSSNDPGSGRIFVEMY-DGNWRLIDSEEGFDALSLALDTRG 1162

Query: 848  RQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPVSDVDNNL 907
             +E+ L   L+  E    + +   L    E+     + ++E D     SSSP      N 
Sbjct: 1163 IRESHLRIMLQMIETSFKENVRRNLQCANEMVQSGITPKNENDY---SSSSPDCTAGFNS 1219

Query: 908  ALSEI---GKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFY--LNLNAVKHG 962
              S +     +++ +  +  +++G+   E+   + R Q+   W+    +    L A+K G
Sbjct: 1220 PSSTVCGLNLDTMVTSSSFRIELGRNENEKKNAFRRYQDLQRWMLRECFSTSTLCAMKFG 1279

Query: 963  KRSYLDALARCERCHDLYWRDEKHCKICHTTF-----ELDFDLEERYAVHAATCRGKGDH 1017
            ++        C+ C  L+     HC  CH TF     +++F    R+            H
Sbjct: 1280 EKRCNSLFDICDSCLCLFDSQHSHCPSCHQTFGVGGNDINFLEHTRHCERERKSSPLDTH 1339

Query: 1018 LVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVV 1077
             +     L S+L  LKA +  IE  +P +A    WT+   + W  R++ +SS+ ELLQ++
Sbjct: 1340 FLDASLPLKSRL--LKAFLAFIEVHVPSEAFQSFWTEHRQE-WGVRMKLSSSIEELLQLL 1396

Query: 1078 ADFVSAINEGWL---------------YQWNVQIADTVMGEIIAFFPTMPQTSSALALWL 1122
              F S I   +L                  NV      +G +I   P +P+TS+A+ L L
Sbjct: 1397 TMFESVIKRDFLKSDFTTTDEHLSSCSISGNVIHDPADIGSVIT-LPWIPRTSAAVGLRL 1455

Query: 1123 VKLDAII 1129
             ++DA I
Sbjct: 1456 CEVDASI 1462



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 26/166 (15%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           KTP Q + L K Y+ E YP++S    L+  L LT +Q++ WF  +R +DK +     P+ 
Sbjct: 36  KTPFQLETLEKAYALETYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKKE-----PAK 90

Query: 66  SSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKKNA------------ 113
             +K+          +   ++V +  S   +   S     G    +NA            
Sbjct: 91  KPRKVVPAPALPDSPIDELRVVAEPGSDYASGSGSGSSPFGDVGLRNAAPRSVGDDMPMM 150

Query: 114 ---------VTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
                    V  L+ +   +  L +  R+DGP LG+EFD LP  AF
Sbjct: 151 RRYYETSRSVMELRAIACVESQLGEPLREDGPILGIEFDPLPPDAF 196


>gi|449433800|ref|XP_004134685.1| PREDICTED: uncharacterized protein LOC101220962 [Cucumis sativus]
          Length = 1675

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 187/381 (49%), Gaps = 51/381 (13%)

Query: 264 LQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELELREL 323
           LQ +     K KQ +  + E+     K   E A    I++E ++    L++DE+LEL EL
Sbjct: 361 LQREYLRAEKRKQKEAIRKEKEAVRRKAAIEKATARRIARESME----LIEDEQLELMEL 416

Query: 324 EVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKV 383
                  +   ++    L      RD L  FPP SV++K+PFG QPW +S E +  L  V
Sbjct: 417 AAANKGLSSILNLDHDTLQNLESFRDYLGAFPPKSVQLKKPFGIQPWVNSEENIGNLLMV 476

Query: 384 FHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHL 443
           + F  T++ ++++  FTLDEF QA HD DS LL +IH+ LL+L++ D+E ++ R     +
Sbjct: 477 WRFFITFSDVLELWPFTLDEFVQALHDYDSRLLAEIHICLLRLIVKDIE-DVARTPSTGM 535

Query: 444 SVSCKFLA--------LLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFG------ 489
            ++   +A        ++       F +  W K LNPLTW EI RQ+ ++AG G      
Sbjct: 536 GMNQNGVANSGGGHPQIVEGAYAWGFDICNWQKHLNPLTWPEIFRQLALSAGHGPQLKKR 595

Query: 490 ----SKQGSSRKESLSKEMILMLKYG------------------------LRPGTLKGEL 521
               S+  S  +    ++++  L+ G                        L PGT+K   
Sbjct: 596 SLAMSEMRSKDEAKCGEDVVSTLRNGSAAENAFAIMQEKGLLAPRRSRHRLTPGTVKFAA 655

Query: 522 FRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRL 581
           F +L  +G+ G  V +LA   Q + L   ST++  E  IS  L+ D  LFE+IA STYR+
Sbjct: 656 FHVLSLEGSEGLTVLELAEKIQRSGLRDLSTSKTPEASISVALTRDTKLFERIAPSTYRV 715

Query: 582 RINTSKEADDFESDAEDIGSV 602
           R    K+ D    DA++I SV
Sbjct: 716 RAPYRKDPD----DADEILSV 732



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 247/549 (44%), Gaps = 77/549 (14%)

Query: 647  MEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MEDPTKAIAES 704
            MEIDES  G+ W+ GL EGEY DL+++E+LNALV L  + + G+SIR  +ED  +A A +
Sbjct: 850  MEIDESKEGESWIQGLTEGEYHDLSVEERLNALVVLTSIANEGNSIRLVLEDRLEA-ANA 908

Query: 705  VPSVRHYGSGAKIKRALPNQHSLPRPSW-VH----------------------AGDFHGV 741
            V   +   + A+I ++   +  + +  + +H                        D    
Sbjct: 909  VK--KQMLTEAQIDKSRLKEEIITKSDFPIHIVSKVEIELNGSTMDGGQSPFPVADNKNN 966

Query: 742  RETNTSRELH---PLDSFSLI-----------SKSCG--KEKSSSVKDAKATEVSTDLHP 785
              T ++ E H   P +  +L+           ++ CG   ++S S   +     + +++ 
Sbjct: 967  ETTPSTAENHSSVPNERGTLVPDLFPGPDNFLAQQCGHASKRSRSQLKSYIAHRAEEMYT 1026

Query: 786  MQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDD 845
             +S+ LG DRR NRYW F+   +  DPG  R++ E   DG+W +ID+EE   AL   LD 
Sbjct: 1027 YRSLPLGRDRRRNRYWQFVASSSSNDPGSGRIFVEMY-DGNWRLIDSEEGFDALSLALDT 1085

Query: 846  RGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPVSDVDN 905
            RG +E+ L   L+  E    + +   L    E+     + ++E D     SSSP      
Sbjct: 1086 RGIRESHLRIMLQMIETSFKENVRRNLQCANEMVQSGITPKNENDY---SSSSPDCTAGF 1142

Query: 906  NLALSEI---GKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFY--LNLNAVK 960
            N   S +     +++ +  +  +++G+   E+   + R Q+   W+    +    L A+K
Sbjct: 1143 NSPSSTVCGLNLDTMVTSSSFRIELGRNENEKKNAFRRYQDLQRWMLRECFSTSTLCAMK 1202

Query: 961  HGKRSYLDALARCERCHDLYWRDEKHCKICHTTF-----ELDFDLEERYAVHAATCRGKG 1015
             G++        C+ C  L+     HC  CH TF     +++F    R+           
Sbjct: 1203 FGEKRCNSLFDICDSCLCLFDSQHSHCPSCHQTFGVGGNDINFLEHTRHCERERKSSPLD 1262

Query: 1016 DHLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQ 1075
             H +     L S+L  LKA +  IE  +P +A    WT+   + W  R++ +SS+ ELLQ
Sbjct: 1263 THFLDASLPLKSRL--LKAFLAFIEVHVPSEAFQSFWTEHRQE-WGVRMKLSSSIEELLQ 1319

Query: 1076 VVADFVSAINEGWL---------------YQWNVQIADTVMGEIIAFFPTMPQTSSALAL 1120
            ++  F S I   +L                  NV      +G +I   P +P+TS+A+ L
Sbjct: 1320 LLTMFESVIKRDFLKSDFTTTDEHLSSCSISGNVIHDPADIGSVIT-LPWIPRTSAAVGL 1378

Query: 1121 WLVKLDAII 1129
             L ++DA I
Sbjct: 1379 RLCEVDASI 1387


>gi|359483496|ref|XP_002273559.2| PREDICTED: uncharacterized protein LOC100247033 [Vitis vinifera]
          Length = 1729

 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/324 (34%), Positives = 163/324 (50%), Gaps = 43/324 (13%)

Query: 312 LVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWD 371
           L++D+ LEL EL            +    L      RDLL+ FPP SV++++PF  QPWD
Sbjct: 460 LIEDDRLELMELAAASKGLPSIVSLDHDTLQNLESFRDLLSVFPPTSVQLRRPFAVQPWD 519

Query: 372 SSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDV 431
            S E +  L  V+ FL T+A ++ +  FTLDEF QAFHD DS L+G+IH+AL+KL++ D+
Sbjct: 520 DSEENIGNLLMVWRFLITFADVLQLWPFTLDEFVQAFHDYDSRLMGEIHIALVKLIIKDI 579

Query: 432 E-----MELGRGCPPHLSVSCKFLALLHSVENQ---EFFVEFWNKSLNPLTWTEILRQVL 483
           E       LG G   + +   +     H VE      F +  W + LNPLTW EILRQ  
Sbjct: 580 EDVARTPSLGLGTNQNTAAGPEG-GHPHIVEGAYAWGFDIRNWQRHLNPLTWPEILRQFA 638

Query: 484 VAAGFGSK-QGSSRKESLSKE---------MILMLKYG---------------------- 511
           ++AGFG + +  S + S S+E         ++  L+ G                      
Sbjct: 639 LSAGFGPQLKKRSSEWSYSRENNEIKGCEDIVSTLRNGSAAVNAVAIMKGKGFSLSRRSR 698

Query: 512 --LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDIT 569
             L PGT+K  +F +L  +G+ G  + +LA   Q + L   + ++  E  IS+ LS D  
Sbjct: 699 HRLTPGTVKFAVFHVLSLEGSKGLTILELADKIQKSGLRDLTRSKAPEASISAALSRDAA 758

Query: 570 LFEKIASSTYRLRINTSKEADDFE 593
           LFE+ A  TY +R    K+  D E
Sbjct: 759 LFERTAPCTYCVRPTFRKDPADAE 782



 Score =  162 bits (411), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 155/585 (26%), Positives = 265/585 (45%), Gaps = 84/585 (14%)

Query: 647  MEIDESHRGDVWLSGLMEGEYSDLTIDEKLNA---LVG-----------LIDLVSAGSSI 692
            +EIDES+ G+ W+ GL EGEYSDL+++E+LNA   L+G           L D + A  ++
Sbjct: 901  VEIDESNSGEPWVQGLAEGEYSDLSVEERLNALVALIGVANEGNTIRAVLEDRLEAAIAL 960

Query: 693  RME-------DPTKAIAESVPSVRH---YGSGAKIK----RALPNQHSLPRPSW------ 732
            + +       D  +   E++  V++     S A +K     A  +Q  LP  +       
Sbjct: 961  KKQMWAEAQLDKKRLKEENITKVQYTSCIASKADMKPTSAAAEGSQSPLPVDNKNNEASL 1020

Query: 733  -VHAGDFHGVRETNTSRELH--PLDSFSLISKSC-----------GKEKSSSVKDAKATE 778
                G    V   N    L   P +  S++ +S              E+S     +    
Sbjct: 1021 NTAVGQKPSVSSHNVQNHLSTLPTEGTSIVQESTVPNNFISQHGYDAERSRLQLKSYIAH 1080

Query: 779  VSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRA 838
             + D++  +S+ LG DRR NRYW F+   +  DPG  R++ E   DG+W +I++EEA  A
Sbjct: 1081 RAEDVYVYRSLPLGQDRRRNRYWQFVASASRNDPGSGRIFVE-LHDGYWRLINSEEAFDA 1139

Query: 839  LLSVLDDRGRQEALLIESLEKREAFLCQAM--SSGLVNNT-EIRHVAQSDQSELDLVRED 895
            L++ LD RG +E+ L   L+K E    + +  +S  V+N  + R   +++ +E D     
Sbjct: 1140 LITSLDTRGIRESHLHAMLQKIEMAFKENVRRNSQCVDNVGQTRTTVKNENTETD----- 1194

Query: 896  SSSP--VSDVDN-NLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSF 952
             S+P  ++  D+ N  +  +  ++L    +  +++G+   E+     R Q+F  W+W   
Sbjct: 1195 -SNPDCIAGFDSPNSTVCGLVSDALEPLSSFGIELGRNEMEKRATLKRYQDFQKWMWKEC 1253

Query: 953  YLN--LNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAAT 1010
            + +  L ++K+GK+     L+ C+ C + Y+ ++ HC  CH TF   FD    +  H   
Sbjct: 1254 FNSEALCSMKYGKKRCAQLLSICDFCFECYFNEDNHCPSCHRTFG-SFDNNVHFLEHVIQ 1312

Query: 1011 CRGKGDHLVSKHKILSSQL----QSLKAAVHAIESVMPEDALVGAWTKSAHK-LWVKRLR 1065
            C  K         I  S L    + LKA +  IE  +P DAL   W +   +  W  +++
Sbjct: 1313 CENKKKTNPEDLHISDSSLPLGIRLLKALLAFIEVSIPLDALESFWMEGYQRETWGMKIQ 1372

Query: 1066 RTSSLAELLQVVADFVSAINE--------------GWLYQWNVQIADTVMGEIIAFFPTM 1111
             +SS+ +LLQ+V      I +              G        + D+     +     +
Sbjct: 1373 TSSSIEDLLQIVTLLEGVIKQDRLSTEFRTTKELLGSCTSSGNAVYDSAYTGSVPVLAWI 1432

Query: 1112 PQTSSALALWLVKLDAIIAPYLERVNSGKEDARMRCRGIFLFPQR 1156
            PQT++A+A+ L++LDA I+ Y+    S   D +        FP R
Sbjct: 1433 PQTTAAVAVRLLELDASIS-YIHHDKSQCHDDKKELGEFRKFPSR 1476



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 16/159 (10%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           KTP Q + L + Y+ E YPT++    L+  L L+ +Q++ WF  +R +DK +       +
Sbjct: 15  KTPFQLQTLERAYALEPYPTEASRAELSEKLGLSDRQLQMWFCHRRLKDKKEG--QAKEA 72

Query: 66  SSKKLKG-----FHGRNRLGVVSAKIVKKQDSLIHNKHLSL-MVCNGT----GKKK---- 111
           +SKK +      F    R    S              +  L  V +G     G++     
Sbjct: 73  ASKKPRNAVAEEFEDEARSEHGSHSGSGSLSGSSPLGYGQLPQVLSGNMGPMGRRSYESP 132

Query: 112 NAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
            ++  L+ + + +  L +  R DGP LG+EFD LP  AF
Sbjct: 133 QSIFELRVIASVEAQLGEPLRDDGPILGMEFDPLPPDAF 171


>gi|356546621|ref|XP_003541723.1| PREDICTED: uncharacterized protein LOC100777465 [Glycine max]
          Length = 1755

 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 155/563 (27%), Positives = 255/563 (45%), Gaps = 95/563 (16%)

Query: 647  MEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MEDPTKAIAES 704
            MEIDES  G+ W+ GL EGEYSDL+++E+LNALV L+ + + G+SIR  +ED  ++    
Sbjct: 934  MEIDESKSGESWILGLTEGEYSDLSVEERLNALVALVGVANEGNSIRVVLEDRLESANAL 993

Query: 705  VPSVRHYGSGAKIKRALPNQHSLPRPSW----VHAGDFHGVRETNTS-----------RE 749
               +       K++    N   L  PS     V     +   E N S            E
Sbjct: 994  KKQMWAEAQIDKVRLKDDNISKLDFPSLTGNKVETPYTYPAMEGNLSPMLDININNINNE 1053

Query: 750  LHPLDSFSL----ISKSCGKEKSSSVKDAKA--------TEVSTDL-------------H 784
              P  + +     +++S   EK SS++D  +        T+VS                H
Sbjct: 1054 ASPSTAENQKGDPVAQSMPMEKCSSIQDFGSGTGADISQTQVSAQYSKRSRSQLKSYIAH 1113

Query: 785  PMQSIYL------GSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRA 838
              + +Y+      G DRR NRYW F+   +  DPG  R++ E   DG W +ID+EEA  A
Sbjct: 1114 IAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVE-YHDGKWRLIDSEEAFDA 1172

Query: 839  LLSVLDDRGRQEALL-----------IESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQS 887
            LL+ LD RG +E+ L            E++ KR A   +  S G  +      +  ++  
Sbjct: 1173 LLTSLDSRGIRESHLRLMLLKIENSFKENVRKRNACCAKNGSRGEFS----IKIEANEAC 1228

Query: 888  ELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAW 947
             +      S SP S       L ++  +   +  +  +++GK   E+     R Q+F  W
Sbjct: 1229 SIPEHNAGSGSPSS------TLHDLNADPSETSSSFKIELGKTESEKKAALRRYQDFQKW 1282

Query: 948  IWNSFYLN--LNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYA 1005
            +W   Y +  L A+K+G       +  C+ C +LY+ ++ HC  CH TF  +      ++
Sbjct: 1283 LWKECYNSSVLCAMKYGIERCKPQMDICDICLNLYFVEDSHCNSCHQTFPSNNGF--NFS 1340

Query: 1006 VHAATCRGK--GDHLVSKHKI-LSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVK 1062
             HA  CR K   D+ + ++ + L ++L  LK  +  +E  +  +A    W     K W  
Sbjct: 1341 KHAFQCRDKLSKDNCILEYSLPLRTRL--LKVLLACMEVSVLSEAFETNWINDVRKHWGI 1398

Query: 1063 RLRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMG---------------EIIAF 1107
            +L ++SS+ ELLQ++  F  ++   +L   N    D ++G               E +A 
Sbjct: 1399 KLSKSSSVEELLQILTLFERSLRRDFL-SLNFSTTDELLGSSSMSERSVQASTDPESVAV 1457

Query: 1108 FPTMPQTSSALALWLVKLDAIIA 1130
             P +P T++AL+L L ++D+ I+
Sbjct: 1458 LPWVPLTTAALSLRLFEIDSSIS 1480



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/325 (34%), Positives = 164/325 (50%), Gaps = 43/325 (13%)

Query: 312 LVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWD 371
           L++DE+LEL EL       +   HI    L      RD L  FPP SVK+++PF  QPW 
Sbjct: 487 LIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCIFPPKSVKLRKPFAIQPWI 546

Query: 372 SSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDV 431
            S + +  L  V+ FL T+A ++D+  FTLDEF QAFHD DS LLG+IHV LLK+++ D+
Sbjct: 547 DSEQNIGNLLMVWRFLITFADVLDLWPFTLDEFVQAFHDYDSRLLGEIHVVLLKVIIKDI 606

Query: 432 EMELGRGCPPHLSVSCKFLA--------LLHSVENQEFFVEFWNKSLNPLTWTEILRQVL 483
           E ++ R     L ++    A        ++       F +  W K+LN LTW E+ RQ+ 
Sbjct: 607 E-DVARTPSTGLGMNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKNLNQLTWPEVFRQLA 665

Query: 484 VAAGFGS----------------------------KQGSSRKESLSK--EMILML----K 509
           ++AG G                             + GS+ + +++K  E  L+     +
Sbjct: 666 LSAGLGPQLKKRNITWSYAIDKDEGKSCKDIISTLRNGSAAESAVAKMQERGLLAPRRSR 725

Query: 510 YGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDIT 569
           + L PGT+K   F +L  +G+ G  V +LA   Q + L   +T++  E  IS  L+ D  
Sbjct: 726 HRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTK 785

Query: 570 LFEKIASSTYRLRINTSKEADDFES 594
           LFE+IA STY +R    K   D +S
Sbjct: 786 LFERIAPSTYCVRDAFRKNPADADS 810



 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 12/153 (7%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           KTP Q + L K Y+ E YP+++    L+  L L+ +Q++ WF  +R +DK +    +PS 
Sbjct: 47  KTPFQLETLEKAYAVENYPSETMRVELSEKLGLSDRQLQMWFCHRRLKDKKE----LPSK 102

Query: 66  SSKKLKGFHGR--------NRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKKNAVTVL 117
             +K                 +GV          S      L  +V  G  +    +  L
Sbjct: 103 KPRKAAALPDSPVEEPKLGPEVGVEYGSGSGSGSSPFARSELRNVVPRGYYESPQTIMEL 162

Query: 118 QDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
           + +   +  L +  R+DGP LGVEFD LP  AF
Sbjct: 163 RAIACVEAQLGEPLREDGPILGVEFDPLPPDAF 195


>gi|297740429|emb|CBI30611.3| unnamed protein product [Vitis vinifera]
          Length = 1682

 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 172/346 (49%), Gaps = 47/346 (13%)

Query: 290 KEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRD 349
           K   E A    I++E ++    L++D+ LEL EL            +    L      RD
Sbjct: 429 KASIEKATARRIARESME----LIEDDRLELMELAAASKGLPSIVSLDHDTLQNLESFRD 484

Query: 350 LLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFH 409
           LL+ FPP SV++++PF  QPWD S E +  L  V+ FL T+A ++ +  FTLDEF QAFH
Sbjct: 485 LLSVFPPTSVQLRRPFAVQPWDDSEENIGNLLMVWRFLITFADVLQLWPFTLDEFVQAFH 544

Query: 410 DKDSMLLGKIHVALLKLLLSDVE-----MELGRGCPPHLSVSCKFLALLHSVENQ---EF 461
           D DS L+G+IH+AL+KL++ D+E       LG G   + +   +     H VE      F
Sbjct: 545 DYDSRLMGEIHIALVKLIIKDIEDVARTPSLGLGTNQNTAAGPEG-GHPHIVEGAYAWGF 603

Query: 462 FVEFWNKSLNPLTWTEILRQVLVAAGFGSK-QGSSRKESLSKE---------MILMLKYG 511
            +  W + LNPLTW EILRQ  ++AGFG + +  S + S S+E         ++  L+ G
Sbjct: 604 DIRNWQRHLNPLTWPEILRQFALSAGFGPQLKKRSSEWSYSRENNEIKGCEDIVSTLRNG 663

Query: 512 ------------------------LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAEL 547
                                   L PGT+K  +F +L  +G+ G  + +LA   Q + L
Sbjct: 664 SAAVNAVAIMKGKGFSLSRRSRHRLTPGTVKFAVFHVLSLEGSKGLTILELADKIQKSGL 723

Query: 548 NLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFE 593
              + ++  E  IS+ LS D  LFE+ A  TY +R    K+  D E
Sbjct: 724 RDLTRSKAPEASISAALSRDAALFERTAPCTYCVRPTFRKDPADAE 769



 Score =  152 bits (385), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 153/579 (26%), Positives = 249/579 (43%), Gaps = 106/579 (18%)

Query: 647  MEIDESHRGDVWLSGLMEGEYSDLTIDEKLNA---LVG-----------LIDLVSAGSSI 692
            +EIDES+ G+ W+ GL EGEYSDL+++E+LNA   L+G           L D + A  ++
Sbjct: 888  VEIDESNSGEPWVQGLAEGEYSDLSVEERLNALVALIGVANEGNTIRAVLEDRLEAAIAL 947

Query: 693  RME-------DPTKAIAESVPSVRH---YGSGAKIK----RALPNQHSLPRPSW------ 732
            + +       D  +   E++  V++     S A +K     A  +Q  LP  +       
Sbjct: 948  KKQMWAEAQLDKKRLKEENITKVQYTSCIASKADMKPTSAAAEGSQSPLPVDNKNNEASL 1007

Query: 733  -VHAGDFHGVRETNTSRELH--PLDSFSLISKSC-----------GKEKSSSVKDAKATE 778
                G    V   N    L   P +  S++ +S              E+S     +    
Sbjct: 1008 NTAVGQKPSVSSHNVQNHLSTLPTEGTSIVQESTVPNNFISQHGYDAERSRLQLKSYIAH 1067

Query: 779  VSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRA 838
             + D++  +S+ LG DRR NRYW F+   +  DPG  R++ E   DG+W +I++EEA  A
Sbjct: 1068 RAEDVYVYRSLPLGQDRRRNRYWQFVASASRNDPGSGRIFVE-LHDGYWRLINSEEAFDA 1126

Query: 839  LLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSS 898
            L++ LD RG +E+ L   L+K E    +                         VR +S +
Sbjct: 1127 LITSLDTRGIRESHLHAMLQKIEMAFKEN------------------------VRRNSHT 1162

Query: 899  PVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLN--L 956
                V + L       E L S G   +++G+   E+     R Q+F  W+W   + +  L
Sbjct: 1163 VCGLVSDAL-------EPLSSFG---IELGRNEMEKRATLKRYQDFQKWMWKECFNSEAL 1212

Query: 957  NAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRGKGD 1016
             ++K+GK+     L+ C+ C + Y+ ++ HC  CH TF   FD    +  H   C  K  
Sbjct: 1213 CSMKYGKKRCAQLLSICDFCFECYFNEDNHCPSCHRTFG-SFDNNVHFLEHVIQCENKKK 1271

Query: 1017 HLVSKHKILSSQL----QSLKAAVHAIESVMPEDALVGAWTKSAHK-LWVKRLRRTSSLA 1071
                   I  S L    + LKA +  IE  +P DAL   W +   +  W  +++ +SS+ 
Sbjct: 1272 TNPEDLHISDSSLPLGIRLLKALLAFIEVSIPLDALESFWMEGYQRETWGMKIQTSSSIE 1331

Query: 1072 ELLQVVADFVSAINE--------------GWLYQWNVQIADTVMGEIIAFFPTMPQTSSA 1117
            +LLQ+V      I +              G        + D+     +     +PQT++A
Sbjct: 1332 DLLQIVTLLEGVIKQDRLSTEFRTTKELLGSCTSSGNAVYDSAYTGSVPVLAWIPQTTAA 1391

Query: 1118 LALWLVKLDAIIAPYLERVNSGKEDARMRCRGIFLFPQR 1156
            +A+ L++LDA I+ Y+    S   D +        FP R
Sbjct: 1392 VAVRLLELDASIS-YIHHDKSQCHDDKKELGEFRKFPSR 1429



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 16/159 (10%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           KTP Q + L + Y+ E YPT++    L+  L L+ +Q++ WF  +R +DK +       +
Sbjct: 2   KTPFQLQTLERAYALEPYPTEASRAELSEKLGLSDRQLQMWFCHRRLKDKKEG--QAKEA 59

Query: 66  SSKKLKG-----FHGRNRLGVVSAKIVKKQDSLIHNKHLSL-MVCNGT----GKKK---- 111
           +SKK +      F    R    S              +  L  V +G     G++     
Sbjct: 60  ASKKPRNAVAEEFEDEARSEHGSHSGSGSLSGSSPLGYGQLPQVLSGNMGPMGRRSYESP 119

Query: 112 NAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
            ++  L+ + + +  L +  R DGP LG+EFD LP  AF
Sbjct: 120 QSIFELRVIASVEAQLGEPLRDDGPILGMEFDPLPPDAF 158


>gi|255553623|ref|XP_002517852.1| homeobox protein, putative [Ricinus communis]
 gi|223542834|gb|EEF44370.1| homeobox protein, putative [Ricinus communis]
          Length = 1784

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 175/360 (48%), Gaps = 44/360 (12%)

Query: 278 KLDKGERLRQPNKEKCELAPDSVISQERLDQIAM-LVDDEELELRELEVGPNPPTCCDHI 336
           K+ + E LR+  +   + A        R+ + +M LVDDE LEL EL            +
Sbjct: 456 KMRQKEELRREKEAARQKAATERAIARRIAKESMELVDDERLELMELAASSKGLPSVASL 515

Query: 337 STKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDI 396
             + L      RD LA FPP SV +K+PF  QPW+ S E V  L  V+ FL T+A ++ +
Sbjct: 516 DFETLQNLDTFRDKLAVFPPKSVLLKKPFSIQPWNDSEENVGNLLMVWRFLITFADVLGM 575

Query: 397 CSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLA----- 451
             FTLDEF QAFHD D  LLG++HVALL+ ++ D+E ++ R     L  +    A     
Sbjct: 576 WPFTLDEFVQAFHDFDPRLLGEMHVALLRTIIKDIE-DVARTPATGLGANQNSAANPGGG 634

Query: 452 ---LLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSK-------QGSSRKESL- 500
              ++       F +  W + LNPLTW EILRQ  ++AGFG +       Q   R E+  
Sbjct: 635 HPQIVEGAYAWGFDICSWQRHLNPLTWPEILRQFALSAGFGPQLKKRNVEQAYHRDENEG 694

Query: 501 --SKEMILMLKYG------------------------LRPGTLKGELFRILLEQGNNGSK 534
              +++I  L+ G                        L PGT+K   F +L  +G+ G  
Sbjct: 695 NDGEDVITNLRNGSAVENAVAIMQERGFSNPRRSRHRLTPGTVKFAAFHVLSLEGSKGLT 754

Query: 535 VCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFES 594
           + ++A   Q + L   +T++  E  I++ LS D  LFE+ A STY +R    K+  D E+
Sbjct: 755 ILEVAEKIQKSGLRDLTTSKTPEASIAAALSRDSKLFERTAPSTYCVRPAYRKDPTDAEA 814



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 186/374 (49%), Gaps = 34/374 (9%)

Query: 782  DLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLS 841
            +++  +S+ LG DRR NRYW F    +  DPG  R++ E   DG W ++D+E+   +LL+
Sbjct: 1128 EMYVYRSLPLGQDRRRNRYWQFTTSNSCNDPGCGRIFVE-LRDGRWRLVDSEKDFDSLLT 1186

Query: 842  VLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSEL-DLV-----RED 895
             LD RG +E+ L   L+K E    +A+   L++    R    + ++E  D+V        
Sbjct: 1187 SLDARGVRESHLHMMLQKIEMSFKEAVRRKLLSADMERQSGDTVKAEAGDMVTGPDCHTG 1246

Query: 896  SSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFY-- 953
            + SP S V   +A S++ + S     +  +++G+   E+++   R Q+F+ W+W   +  
Sbjct: 1247 TDSPSSTV--CIADSDVSETST----SFAVELGRNESERNQALRRYQDFEKWMWKECFNG 1300

Query: 954  LNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRG 1013
            L L A K+GK+     +  C+ CH +Y+ ++  C    T  +   DL   ++ H   C  
Sbjct: 1301 LVLCASKYGKKRSRQLVGVCDYCHGIYFSEDDQCPCSRTCEKPGSDL--NFSKHMVHCEE 1358

Query: 1014 KGDHLVSKHKILSS---QLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSL 1070
            K    ++     SS   +++ LK  +  IE  + ++AL   WT    K W  RL+ + S 
Sbjct: 1359 KSRVGLAYSSHASSSPLRIRLLKMQLALIEVSLLQEALQPVWTNGYRKSWGMRLQSSLSA 1418

Query: 1071 AELLQVVA--------DFVSAINE------GWLYQWNVQIADTVMGEIIAFFPTMPQTSS 1116
             +LLQV+         D++S+  E      G ++ +     D+   E +   P +P+T++
Sbjct: 1419 EDLLQVLTLLEVSIKRDYLSSKFETTSELLGSIHSFGSSGNDSSRKENVPVLPWLPRTTA 1478

Query: 1117 ALALWLVKLDAIIA 1130
            A+AL +++ D+ I+
Sbjct: 1479 AVALRVMEFDSSIS 1492



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 38/47 (80%)

Query: 648 EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRM 694
           +IDES+ G+ W+ GL+EGEYSDL+++E+LNA V LI +   G+SIR+
Sbjct: 943 DIDESNLGEPWVQGLIEGEYSDLSVEERLNAFVALIGVAIEGNSIRV 989



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 27/173 (15%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWF------------IEKR 51
           K KT  Q + L K Y+ E YP++     L+A L LT +Q++ WF            ++++
Sbjct: 28  KMKTASQLEILEKTYAVETYPSEELRAELSAQLGLTDRQLQMWFCHRRLKDRKGPPVKRQ 87

Query: 52  RRDKGDNGIVIPSSSSKKLKGFHGRNRL-------------GVVSAKIVKKQDSLIHNKH 98
           R+D+     V+P      +     RN L             G+ S ++V +   +   + 
Sbjct: 88  RKDESPAPSVVPGGEVTGVAA-EVRNELLPMPAAGSSPFGHGMDSRRVVARTPGVAVARI 146

Query: 99  LSLM-VCNGTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
            S M       + + A+  L+ +   +  L +  R+DGP LG+EFD LP  AF
Sbjct: 147 SSEMSAIKRYYEPQQAIAELRAIAFVEAQLGEPLREDGPILGMEFDPLPPDAF 199


>gi|218188822|gb|EEC71249.1| hypothetical protein OsI_03220 [Oryza sativa Indica Group]
          Length = 1584

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 158/585 (27%), Positives = 267/585 (45%), Gaps = 92/585 (15%)

Query: 648  EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MED--------P 697
            EIDES++G+ W+ GL EG+Y DL+++E+LNALV L+ + + G+ IR  +E+         
Sbjct: 758  EIDESNQGESWVHGLAEGDYCDLSVEERLNALVALVSVANEGNFIRAVLEERLESANALK 817

Query: 698  TKAIAESVPSVR----------HYGSGAKIKRALPNQHSL-PRPSWVHAGDFH-----GV 741
             + +AE+    R           Y S   +K  +  +++    P+  H  D H     GV
Sbjct: 818  KQMLAEAQLDKRRSKEEFAGRVQYNSNMNLKADVNQENATESTPTPFHNVDKHNDGNAGV 877

Query: 742  RETNT-------------SRELHPL--------DSFSLISKSCGKEKSSSVKDAKATEVS 780
             + N              S E + L        D+ S + +    +K+ S   A     +
Sbjct: 878  VDNNNNEIIDHNSNAANASYERNGLGQDIAATPDTLS-VQQYAYADKTRSQLRAYIGHRA 936

Query: 781  TDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALL 840
              L   +S+ LG DRR NRYW F    +  DPG  R++FE   DG+W V+DTEEA  +L+
Sbjct: 937  EQLFVYRSLPLGQDRRRNRYWQFSTSASPNDPGSGRIFFEC-RDGYWRVLDTEEAFDSLV 995

Query: 841  SVLDDRGRQEALLIESLEKREAFLCQAM---SSGLVNNTEIRHVAQSDQSELDL-VREDS 896
            + LD RG +EA L   L++ E    +A+    S +V  +  R++       +    R D 
Sbjct: 996  ASLDTRGSREAQLHSMLQRIEPTFKEAIKRKKSAVVEQSAGRYLKNGATEMIRASYRSDF 1055

Query: 897  SSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIW---NSFY 953
             SP S++    + S I         +  +++G+   E+  +  R   F  W+W   N   
Sbjct: 1056 GSPSSNLSGVTSDSAIAY-----SDSFKIELGRNDVEKTAISKRADVFIRWMWRECNDCK 1110

Query: 954  LNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRG 1013
            L   A+++GK+   + +  C  C+ +Y  +E+HC  CH  F+   +    ++ HA+ C+ 
Sbjct: 1111 LTC-AMEYGKKRCSELMHSCNYCYQIYLAEERHCSSCHKNFKSIHN----FSDHASQCKD 1165

Query: 1014 K--GDH---LVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTS 1068
            K   DH   + +    +   ++ LK  +  IE+ +P +A+   WT    K W  +L  T+
Sbjct: 1166 KLRTDHNWKMQTADHSVPIGVRLLKLQLSTIEASIPPEAIQPFWTDGYRKSWGVKLHSTT 1225

Query: 1069 SLAELLQVVADFVSAINEGWL--------------YQWNVQIADTVMGEIIAFFPTMPQT 1114
            SL E+ Q++    +AI    L               Q N       +    A  P +P T
Sbjct: 1226 SLEEIFQMLTLLEAAIKRDHLSSEFETTSELLNLNTQDNPSQNHVGLSGSAAVLPWVPDT 1285

Query: 1115 SSALALWLVKLDAIIAPYLERVNSGKEDARMRCRGIFLFPQRPFI 1159
            ++A+AL ++ LD+ ++ Y++  N   E    R  G F+ P   F+
Sbjct: 1286 TAAIALRMLDLDSAVS-YMQ--NQKME----RNGGDFMKPPSRFV 1323



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 177/394 (44%), Gaps = 64/394 (16%)

Query: 259 RLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEEL 318
           R+   +Q + +   K +Q +  + E+     K   E A    I++E ++    L++DE L
Sbjct: 232 RMEKFMQKQSRRAEKQRQKEELRKEKEAARQKAANERATARRIAREYME----LMEDERL 287

Query: 319 ELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPE--- 375
           EL EL            + +  L      R +L  FPP  V++K+PF  +PW  S +   
Sbjct: 288 ELMELAAQSKGLPSMLSLDSDTLQQLDSFRGMLTPFPPEPVRLKEPFSIKPWTVSEDNVG 347

Query: 376 --------------------TVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSML 415
                               T+  L +V+ F  T+A ++ + S T DEF Q+ HD DS L
Sbjct: 348 NLLMTHILSMQMDKQIDLFDTLASLHQVWKFSITFADVLGLSSVTFDEFVQSLHDYDSRL 407

Query: 416 LGKIHVALLKLLLSDVEMELGRGCPPHLSV--SCKFLALLHSVENQEFFVEFWNKSLNPL 473
           LG++H+ALLK ++ D+E ++ R     L+V  +     ++       F +  W + LN L
Sbjct: 408 LGELHIALLKSIIKDIE-DVSRTPSVALAVNPAGGHPQIVEGAYAWGFNIRSWQRHLNVL 466

Query: 474 TWTEILRQVLVAAGFGSKQGSSRKESL----------SKEMILMLKYG------------ 511
           TW EILRQ  ++AGFG +      E +           +++I  L+ G            
Sbjct: 467 TWPEILRQFALSAGFGPQLKKRNAEDVYYRDDNEGHDGQDVISTLRNGSAAVHAAALMKE 526

Query: 512 ------------LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELL 559
                       L PGT+K   F +L  +G+ G  + ++A   Q + L   +T++  E  
Sbjct: 527 RGYTHRRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILEVAERIQKSGLRDLTTSKTPEAS 586

Query: 560 ISSTLSSDITLFEKIASSTYRLRINTSKEADDFE 593
           I++ LS D  LFE+ A STY ++    K+  D E
Sbjct: 587 IAAALSRDTKLFERTAPSTYCVKSPYRKDPADSE 620


>gi|297845788|ref|XP_002890775.1| HB-1 [Arabidopsis lyrata subsp. lyrata]
 gi|297336617|gb|EFH67034.1| HB-1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1705

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 164/335 (48%), Gaps = 45/335 (13%)

Query: 301 ISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVK 360
           I++E +D    L++DE+LEL EL            +    L    + RD L+ FPP S++
Sbjct: 481 IAKESMD----LIEDEQLELMELAAISKGLPSVLQLDHDTLQNLEVYRDSLSTFPPKSLQ 536

Query: 361 MKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIH 420
           +K PF   PW  S ETV  L  V+ FL +++ ++D+  FTLDEF QAFHD DS LLG+IH
Sbjct: 537 LKMPFAISPWKDSDETVGNLLMVWRFLISFSDVLDLWPFTLDEFIQAFHDYDSRLLGEIH 596

Query: 421 VALLKLLLSDVE-------MELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLNPL 473
           V LL+ ++ D+E         +G       +       ++       F +  W K LNPL
Sbjct: 597 VTLLRSIIRDIEDVARTPFSGIGNNQYTTANPEGGHPQIVEGAYAWGFDIRSWKKHLNPL 656

Query: 474 TWTEILRQVLVAAGFG----------SKQGSSRKESLSKEMILMLKYG------------ 511
           TW EILRQ+ ++AGFG          +  G   +    +++I  ++ G            
Sbjct: 657 TWPEILRQLALSAGFGPRLKKKHSRLTNTGDKDEAKGCEDIISTIRNGSAAESAFASMRE 716

Query: 512 ------------LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELL 559
                       L PGT+K   F +L  +G+ G  V +LA   Q + L   +T++  E  
Sbjct: 717 KGLLAPRKSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELADKIQKSGLRDLTTSKTPEAS 776

Query: 560 ISSTLSSDITLFEKIASSTYRLRINTSKEADDFES 594
           IS  L+ D+ LFE+IA STY +R    K+  D E+
Sbjct: 777 ISVALTRDVKLFERIAPSTYCVRAPYVKDPADGEA 811



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 237/565 (41%), Gaps = 141/565 (24%)

Query: 649  IDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRMEDPTKAIAESVPSV 708
            +DES++G  W+ GL EG+Y  L+++E+LNA   L+ LV              IA    S+
Sbjct: 928  VDESNQGQSWIQGLTEGDYCHLSVEERLNA---LVALV-------------GIANEGNSI 971

Query: 709  RHYGSGAKIKRALPNQHSLPRPSWVHAG------------DFHGVRETNTSR-------- 748
            R     A ++  +   +SL +  W  A             DF  +  + T          
Sbjct: 972  R-----AGLEDRMEAANSLKKQMWAEAQLDNSCMRDVLKLDFQNLASSKTESTMGLPIIQ 1026

Query: 749  ------------------ELHPLDSFSLISKSCGKEKSSSVKDAKATE------------ 778
                              E  PLD  S        E++   +DA  ++            
Sbjct: 1027 SSTRERDSFDRDPSQLLDETKPLDDLSNNLHKSSAERALINQDANISQENCSSQLGYASK 1086

Query: 779  ------------VSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGH 826
                         + +++P +S+ LG DRR+NRYW F    ++ DP    ++ E   DG 
Sbjct: 1087 RSRSQLKSYIGHKAEEVYPYRSLPLGQDRRHNRYWHFAVSVSKSDPCSGLLFVEL-HDGK 1145

Query: 827  WEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEI-RHVAQSD 885
            W +ID+EEA   L++ LD RG +E+ L   L+K E     +       N ++ R+    +
Sbjct: 1146 WLLIDSEEAFDVLVASLDMRGIRESHLRIMLQKIEG----SFKENACKNIKLDRNPFLKE 1201

Query: 886  QSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFD 945
            +S ++    DS SP S      A+S    +S+ +  +I +++G+   E   +  R  +F 
Sbjct: 1202 KSIVNHSPTDSVSPSS------AISGSNSDSMETSTSIRVELGRNDTENKNLSKRFHDFQ 1255

Query: 946  AWIWNSFYLNLN--AVKHGK-RSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEE 1002
             W+W   Y +L   A K+GK RS L  LA C+ C   Y  +  HC  CH   ++      
Sbjct: 1256 RWMWTETYSSLPSCARKYGKKRSEL--LATCDACVASYLSEYTHCTSCHQRLDV------ 1307

Query: 1003 RYAVHAATCRGKGDHLVSKHKILSSQL---------QSLKAAVHAIESVMPEDALVGAWT 1053
                            V   +IL S L         + LK  +  +E+ +P++AL   WT
Sbjct: 1308 ----------------VDSSEILDSGLTVSPLPFGVRLLKPLLVFLEASVPDEALESFWT 1351

Query: 1054 KSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMGEIIA------- 1106
            +   K+W  RL  +SS  +LLQV+    SAI +  L   N   A  ++G   A       
Sbjct: 1352 EDKRKIWGFRLNASSSPEDLLQVLTSLESAIKKESLSS-NFMSAKELLGAANADVDDPGS 1410

Query: 1107 --FFPTMPQTSSALALWLVKLDAII 1129
                P +P+T SA+AL L +LDA I
Sbjct: 1411 VDILPWIPKTVSAVALRLSELDASI 1435



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 27/171 (15%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           KTP Q + L K YSEE YP+++    L+  LDL+ +Q++ WF  +R +DK D     P+ 
Sbjct: 47  KTPFQLETLEKVYSEETYPSEATRADLSEKLDLSDRQLQMWFCHRRLKDKKDGQSKKPAK 106

Query: 66  SSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLS----------------------LMV 103
           S+ +       +   +  A  V +QDS   +   S                      L  
Sbjct: 107 SAVQSSAL-ASSVHELPPAGSVPEQDSRSDSGSESGCSPYSNSRRNFASGSSSSRAELDE 165

Query: 104 CNGTGK----KKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
            +  GK     + +  V + ++  +  L +  R DGP LG+EFD LP  AF
Sbjct: 166 YDTMGKASYESRLSTMVRRAIVCIEAQLGEPLRDDGPILGMEFDPLPPGAF 216


>gi|297604909|ref|NP_001056321.2| Os05g0562400 [Oryza sativa Japonica Group]
 gi|51854271|gb|AAU10652.1| unknown protein [Oryza sativa Japonica Group]
 gi|255676572|dbj|BAF18235.2| Os05g0562400 [Oryza sativa Japonica Group]
          Length = 1397

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 157/587 (26%), Positives = 261/587 (44%), Gaps = 96/587 (16%)

Query: 648  EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MEDPTKAIA--- 702
            EIDES++G+ W+ GL EG+Y DL+++E+LNALV LI + + G+SIR  +E+  +A +   
Sbjct: 553  EIDESNQGESWVQGLAEGDYCDLSVEERLNALVALIGVATEGNSIRAVLEERLEAASALK 612

Query: 703  ---------------ESVPSVRHYGSGAKIKRALPNQHSL------PRPSWVHAGDFHG- 740
                           E   S   Y SG  +K  +  Q++L      P  + V   + +G 
Sbjct: 613  KQMWAEAQLDKRRSREEFSSKMQYDSGMGLKTDVDQQNTLAESNLTPVHNLVKDSNGNGS 672

Query: 741  -------------------VRETNTSRELHPLDSFSLISKS-CGKEKSSSVKDAKATEVS 780
                               V E N  R+    +  +L  +     EK+ S   +     +
Sbjct: 673  LVNNELPVDQQSQPNACSVVHERNGVRQEFSANPENLSGQQYVTSEKTRSQLKSYIGHKA 732

Query: 781  TDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALL 840
              LH  +S+ LG DRR NRYW F    +  DPG  R++FE S DG+W +ID+ E   AL+
Sbjct: 733  EQLHVYRSLPLGQDRRRNRYWQFSTSASPDDPGSGRIFFE-SRDGYWRLIDSIETFDALV 791

Query: 841  SVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPV 900
            S LD RG +E+ L   L+  E    +A+          +  A  + S   +++  +S  +
Sbjct: 792  SSLDTRGIRESHLHSMLQSIEPTFKEAIGR--------KRCASIEPSAGRVLKNGTSEII 843

Query: 901  SDVDNN------LALSEIGKES-LPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWN--S 951
            S   +N        LS +  +S +    +  +++G+   E+  +  R   F  W+W   +
Sbjct: 844  SPNHSNEFGSPCSTLSGVATDSAMAYSDSFRIELGRNDVEKTAISERADLFIKWMWKECN 903

Query: 952  FYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATC 1011
             +    A+KHGK+   + +  C+ C+ +Y  +E HC  CH TF+   ++ E    H++ C
Sbjct: 904  NHQPTCAMKHGKKRCSELIQCCDFCYQIYLAEETHCASCHKTFKSIHNISE----HSSQC 959

Query: 1012 RGKG------DHLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLR 1065
              K          +S + +              +E+ +P +AL   WT    K W  +L 
Sbjct: 960  EEKRRTDPNWKMQISDYSVPVGLRLLKLLLA-TVEASVPAEALEPFWTDVYRKSWGVKLY 1018

Query: 1066 RTSSLAELLQVVA--------DFVSAINEGWLYQWNVQIADTVMGEIIA------FFPTM 1111
             TSS  E+ +++         DF+S+  E      N+   D+     +         P +
Sbjct: 1019 STSSTKEVFEMLTILEGAIRRDFLSSDFETTTELLNLSTQDSASRNTVPRSGSADVLPWV 1078

Query: 1112 PQTSSALALWLVKLDAIIAPYL-ERVNSGKEDARMRCRGIFL-FPQR 1156
            P T +A+ L L+ LD+ I+  L ++V S KE    R  G F+  P R
Sbjct: 1079 PDTVAAVVLRLLDLDSAISYTLRQKVGSNKE----RGAGEFMKLPPR 1121



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 176/360 (48%), Gaps = 48/360 (13%)

Query: 278 KLDKGERLRQPNKEKCELAPDSVISQERLDQIAM-LVDDEELELRELEVGPNPPTCCDHI 336
           K+ + E LR+  +   + A +   +  R+ +  M L++DE LEL EL            +
Sbjct: 63  KIRQKEELRKEKEAARQKAANERATARRIAREYMELMEDERLELMELVSRSKGLPSMLSL 122

Query: 337 STKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDI 396
            +  L      R +L +FP   V++K PF  +PW SS + +  L  V+ F  T+A ++ I
Sbjct: 123 DSDTLQQLDSFRGMLRQFPSEIVRLKVPFSIKPWTSSEDNIGNLLMVWKFFITFADVLGI 182

Query: 397 CSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLA----- 451
            SFTLDEF Q+ HD DS LLG++HVALLK ++ D+E ++ R  P   SV+    A     
Sbjct: 183 PSFTLDEFVQSLHDYDSRLLGELHVALLKSIIKDIE-DVAR-TP---SVASGMTANPGGG 237

Query: 452 ---LLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLS------- 501
              ++    +  F +  W + LN LTW EILRQ  ++AG G +      E+++       
Sbjct: 238 HPQIVEGAYDWGFNILAWQRHLNLLTWPEILRQFGLSAGLGPQLRKRNAENVNNHDDNEG 297

Query: 502 ---KEMILMLKYG------------------------LRPGTLKGELFRILLEQGNNGSK 534
              +++I +L+ G                        L PGT+K   F +L  +G+ G  
Sbjct: 298 RNGEDVISILRSGSAAVNAAAKMKERGYGNRRRSRHRLTPGTVKFAAFHVLSLEGSQGLT 357

Query: 535 VCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFES 594
           + ++A   Q + L   +T++  E  IS+ LS D  LFE+ A STY ++    K+  D E+
Sbjct: 358 ILEVAEKIQKSGLRDLTTSKTPEASISAALSRDSKLFERTAPSTYCVKTPYRKDPADSEA 417


>gi|225446457|ref|XP_002275272.1| PREDICTED: uncharacterized protein LOC100250601 [Vitis vinifera]
          Length = 1772

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 178/389 (45%), Gaps = 55/389 (14%)

Query: 281 KGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKG 340
           K E  R+    + + A D  I++    +   L++DE LEL EL            + ++ 
Sbjct: 456 KEELRREKEAARVKAANDRAIARRIAKESMELIEDERLELMELVALSKGLPSILSLDSET 515

Query: 341 LHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFT 400
           L      RD+L  FPP SV++++PF  QPW  S E +  L  V+ FL T++ ++ +  FT
Sbjct: 516 LQNLESFRDMLTAFPPKSVQLRRPFTIQPWTDSEENIGNLLMVWRFLITFSDVLGLWPFT 575

Query: 401 LDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE-------MELGRGCPPHLSVSCKFLALL 453
           +DEF QAFHD D  LLG+IHVALL+ ++ D+E       + LG       +       ++
Sbjct: 576 MDEFVQAFHDYDPRLLGEIHVALLRSIIKDIEDVARTPSIGLGANQNSAANPGGGHPQIV 635

Query: 454 HSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESL----------SKE 503
                  F +  W + LNPLTW EILRQ  ++AGFG K      E             ++
Sbjct: 636 EGAYAWGFDIRSWQRHLNPLTWPEILRQFALSAGFGPKLKKRNVEETYLRDDNEGNDCED 695

Query: 504 MILMLKYG------------------------LRPGTLKGELFRILLEQGNNGSKVCQLA 539
           +I  L+ G                        L PGT+K   F +L  +G+ G  + ++A
Sbjct: 696 IITNLRSGAAAENAVAIMQERGFSNPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILEVA 755

Query: 540 RSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADD-------- 591
              Q + L   +T++  E  I++ LS D  LFE+ A STY +R    K+  D        
Sbjct: 756 DKIQKSGLRDLTTSKTPEASIAAALSRDGKLFERTAPSTYCVRPAYRKDPADADAILSAA 815

Query: 592 ------FESDAEDIGSVDDNSDDDDTCSN 614
                 F+S   D    DD   D+D+ S+
Sbjct: 816 REKIQIFKSGCSDGEEADDVERDEDSESD 844



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 194/408 (47%), Gaps = 63/408 (15%)

Query: 766  EKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDG 825
            EKS S   +     + +++  +S+ LG DRR NRYW F+   +  DP   R++ E   +G
Sbjct: 1113 EKSRSQLKSYIGHKAEEMYVYRSLPLGQDRRRNRYWQFITSASRNDPNSGRIFVEL-RNG 1171

Query: 826  HWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAM-----------SSGLVN 874
             W +ID+EE   AL++ LD RG +EA L   L++ E    + +            SG   
Sbjct: 1172 CWRLIDSEEGFDALVASLDARGVREAHLQSMLQRIEISFKETVRRNLQLSSIGRQSGGAV 1231

Query: 875  NTEIRHVAQSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQ 934
             TE   +A+     +D+   DS S    V N+ A         PS  +  +++G+   E+
Sbjct: 1232 KTEDSEMARPTGCSVDI---DSPSSTVCVSNSDATE-------PSA-SFSIELGRNDAEK 1280

Query: 935  HRMWSRLQEFDAWIWNSFY--LNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHT 992
                +R Q+F+ W+W        L A+K+GK+     L  C+ CHDL++ ++ HC  CH 
Sbjct: 1281 FDALNRYQDFEKWMWKECINPSTLCALKYGKKRCTQLLGICDHCHDLHFFEDNHCPSCHR 1340

Query: 993  TFELDFDLEERYAVHAATCRGKGDHLVSKHKI------------LSSQLQSLKAAVHAIE 1040
            T+     L+  Y+ H A C         KHK+               +++ LKA +  IE
Sbjct: 1341 TYS---PLDSNYSEHVAQCE-------EKHKVDLEWGFSSSSDSSPLRIKLLKAHLALIE 1390

Query: 1041 -SVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVA--------DFVSA----INE- 1086
             SV+PE AL   WT +  K W  +L  +SS  +L+Q++         D++S+     NE 
Sbjct: 1391 VSVLPE-ALQPDWTDTYRKSWGMKLHASSSAEDLIQILTLLESNIRRDYLSSDFETTNEL 1449

Query: 1087 -GWLYQWNVQIADTVMGEIIAFFPTMPQTSSALALWLVKLDAIIAPYL 1133
             G        + D++    +   P +PQT++A+A+ L++LDA I+  L
Sbjct: 1450 LGLSNASGCAVDDSLAAGSVPVLPWIPQTTAAVAIRLIELDASISYML 1497



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 39/47 (82%)

Query: 648 EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRM 694
           +IDES+ G+ W+ GLMEGEYSDL+++E+LNALV LI +   G+SIR+
Sbjct: 944 DIDESNSGEPWVQGLMEGEYSDLSVEERLNALVALIGVAIEGNSIRI 990



 Score = 47.8 bits (112), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 24/171 (14%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           K KT  Q + L K Y+ E YP+++    L+A L L+ +Q++ WF  +R +D+    +  P
Sbjct: 22  KMKTASQLEILEKTYAVETYPSETLRAELSAKLGLSDRQLQMWFCHRRLKDRKTPPVKRP 81

Query: 64  SSSS-----KKLKGFHGRNRLGV-------------------VSAKIVKKQDSLIHNKHL 99
              S         G   R  + V                    S ++V +  + +     
Sbjct: 82  RKDSPVKVTSSAAGTPVREEMEVGNEHPSGSGSGSSPFGHVLESRRVVPRPGTAVARIGA 141

Query: 100 SLMVCNGTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
            +       +    ++ L+ +   +  L +  R+DGP LG+EFD LP  AF
Sbjct: 142 DMPPMKRYYEPPQPISELRAIAFVEAQLGEPLREDGPILGMEFDPLPPDAF 192


>gi|224095585|ref|XP_002310414.1| predicted protein [Populus trichocarpa]
 gi|222853317|gb|EEE90864.1| predicted protein [Populus trichocarpa]
          Length = 1728

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/356 (32%), Positives = 175/356 (49%), Gaps = 43/356 (12%)

Query: 281 KGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKG 340
           K E  R+    + + A +  I++    +   L+DDE LEL E+            +  + 
Sbjct: 449 KEELRREKEAARQKAATERAIARRMAKESMELIDDERLELMEMAASSKGLPSIIPLDFET 508

Query: 341 LHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFT 400
           L    L RD L +FPP SV +K+PF  QPW+ S E V  L  V+ FL T+A ++ I  FT
Sbjct: 509 LQNLDLFRDKLTEFPPKSVLLKRPFLIQPWNDSEENVGNLLMVWRFLITFADVLGIWPFT 568

Query: 401 LDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGR----GCPPHLSVSCK----FLAL 452
           LDEF QAFHD DS LL ++HVALLK ++ D+E ++ R    G  P+ + +         +
Sbjct: 569 LDEFVQAFHDYDSRLLSEVHVALLKSIIKDIE-DVARTPATGLGPNQNGAANPGGGHPQI 627

Query: 453 LHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSK-------QGSSRKESL---SK 502
           +       F +  W + LNPLTW EILRQ  ++AGFG +       Q   R ++     +
Sbjct: 628 VEGAYAWGFDLRSWQRHLNPLTWPEILRQFGLSAGFGPQMKKRNVDQAYLRDDNEGNDGE 687

Query: 503 EMILMLKYG------------------------LRPGTLKGELFRILLEQGNNGSKVCQL 538
           ++I  L+ G                        L PGT+K   F +L  +G+ G  + ++
Sbjct: 688 DVITNLRNGAAVENAVSIMQERGFSNPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILEV 747

Query: 539 ARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFES 594
           A   Q + L   +T++  E  I++ LS D  LFE+ A STY +R    K+  D ++
Sbjct: 748 ADKIQKSGLRDLTTSKTPEASIAAALSRDSKLFERTAPSTYCIRPAYRKDPADTDT 803



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 190/417 (45%), Gaps = 49/417 (11%)

Query: 766  EKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDG 825
            EKS S   +     + +++  +S+ LG DRR NRYW F    +  DPG  R++ E   DG
Sbjct: 1100 EKSRSQLKSVIGHRAEEMYVYRSLPLGQDRRRNRYWQFTTSASRNDPGCGRIFVE-LHDG 1158

Query: 826  HWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSD 885
             W +ID EE    LLS LD RG +E+ L   L+K E    + M   ++   E+    +S 
Sbjct: 1159 RWRLIDYEEGFDTLLSSLDVRGVRESHLHAMLQKIEVPFKETMRRRML-PVEMAAGPESG 1217

Query: 886  QSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFD 945
             + +D  R     P SD+               +  +  +++G+   E++    R Q+F+
Sbjct: 1218 -TGMDSPRSTVCVPDSDMSE-------------TSTSFTIELGRNEIEKNHTLKRFQDFE 1263

Query: 946  AWIWNSFYLN--LNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEER 1003
             W+W   + +  L A+K+ K+     L  C+ CHD Y+ ++ HC  CH T      L   
Sbjct: 1264 KWMWKECFKSSVLCAMKYEKKRCTQLLGVCDYCHDTYFFEDNHCPSCHKTHASQTGLN-- 1321

Query: 1004 YAVHAATCRGK----------GDHLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWT 1053
            ++ H A C  K                + ++L S L  ++A+   + SV+PE AL   WT
Sbjct: 1322 FSEHVAHCERKLKMDPDSALCSLSFPPRIRLLKSLLALIEASALNV-SVLPE-ALQPVWT 1379

Query: 1054 KSAHKLWVKRLRRTSSLAELLQVVA--------DFVSAINEGWLYQWNVQIA------DT 1099
                K W  +L+ +S + +LLQ++         D++S+  E      +          D+
Sbjct: 1380 NGYRKSWGMKLQSSSCVDDLLQILTLLEIGMKRDYLSSNYETSSELLSSSDPSGCAAHDS 1439

Query: 1100 VMGEIIAFFPTMPQTSSALALWLVKLDAIIAPYLERVNSGKEDARMRCRGIFLFPQR 1156
                     P +PQT++A+AL +++ DA I+  L +    ++D   R  G F+ P +
Sbjct: 1440 FNTGTAPVLPWLPQTTAAVALRVIEFDASISYMLHQKLESQKD---RSAGNFILPSK 1493



 Score = 61.2 bits (147), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 40/48 (83%)

Query: 647 MEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRM 694
           ++IDE++ G+ W+ GL+EGEYSDL+++E+LNALV LI +   G+SIR+
Sbjct: 930 VDIDENNLGEPWVQGLVEGEYSDLSVEERLNALVALIGVAIEGNSIRV 977



 Score = 53.9 bits (128), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 22/168 (13%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           K K+  Q + L K YS + YP+++    L+  L L+ +Q++ WF  +R +D+    +  P
Sbjct: 18  KMKSASQLEILEKTYSVDTYPSEAARAELSVQLGLSDRQLQMWFCHRRLKDRKAPLVKRP 77

Query: 64  SSSSKKLKGFHGRNRLGVVSAKIVKKQDS----LIHNKHLSLMVCNGTG----------- 108
              S    G  G   +GVV A++  +  S     +        V   TG           
Sbjct: 78  RKESPSPAGMPGGGEMGVV-AEVGNEHGSGSSPFVLGVDPRRAVGRPTGVAVPRISADVQ 136

Query: 109 ------KKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
                 + + ++  L+ +   +  L +  R+DGP LG+EFD LP  AF
Sbjct: 137 AMKRYYEPQQSIAELRAVAFVEAQLGEPLREDGPILGMEFDPLPPDAF 184


>gi|302143341|emb|CBI21902.3| unnamed protein product [Vitis vinifera]
          Length = 1870

 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 178/389 (45%), Gaps = 55/389 (14%)

Query: 281 KGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKG 340
           K E  R+    + + A D  I++    +   L++DE LEL EL            + ++ 
Sbjct: 606 KEELRREKEAARVKAANDRAIARRIAKESMELIEDERLELMELVALSKGLPSILSLDSET 665

Query: 341 LHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFT 400
           L      RD+L  FPP SV++++PF  QPW  S E +  L  V+ FL T++ ++ +  FT
Sbjct: 666 LQNLESFRDMLTAFPPKSVQLRRPFTIQPWTDSEENIGNLLMVWRFLITFSDVLGLWPFT 725

Query: 401 LDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE-------MELGRGCPPHLSVSCKFLALL 453
           +DEF QAFHD D  LLG+IHVALL+ ++ D+E       + LG       +       ++
Sbjct: 726 MDEFVQAFHDYDPRLLGEIHVALLRSIIKDIEDVARTPSIGLGANQNSAANPGGGHPQIV 785

Query: 454 HSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLS----------KE 503
                  F +  W + LNPLTW EILRQ  ++AGFG K      E             ++
Sbjct: 786 EGAYAWGFDIRSWQRHLNPLTWPEILRQFALSAGFGPKLKKRNVEETYLRDDNEGNDCED 845

Query: 504 MILMLKYG------------------------LRPGTLKGELFRILLEQGNNGSKVCQLA 539
           +I  L+ G                        L PGT+K   F +L  +G+ G  + ++A
Sbjct: 846 IITNLRSGAAAENAVAIMQERGFSNPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILEVA 905

Query: 540 RSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADD-------- 591
              Q + L   +T++  E  I++ LS D  LFE+ A STY +R    K+  D        
Sbjct: 906 DKIQKSGLRDLTTSKTPEASIAAALSRDGKLFERTAPSTYCVRPAYRKDPADADAILSAA 965

Query: 592 ------FESDAEDIGSVDDNSDDDDTCSN 614
                 F+S   D    DD   D+D+ S+
Sbjct: 966 REKIQIFKSGCSDGEEADDVERDEDSESD 994



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 171/402 (42%), Gaps = 109/402 (27%)

Query: 766  EKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDG 825
            EKS S   +     + +++  +S+ LG DRR NRYW F+   +  DP   R++ E   +G
Sbjct: 1263 EKSRSQLKSYIGHKAEEMYVYRSLPLGQDRRRNRYWQFITSASRNDPNSGRIFVE-LRNG 1321

Query: 826  HWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSD 885
             W +ID+EE   AL++ LD RG +EA L   L++ E    +                   
Sbjct: 1322 CWRLIDSEEGFDALVASLDARGVREAHLQSMLQRIEISFKET------------------ 1363

Query: 886  QSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIV-------------LDVGKKGE 932
                             V  NL LS IG+++ PS    V             +++G+   
Sbjct: 1364 -----------------VRRNLQLSSIGRQNSPSSTVCVSNSDATEPSASFSIELGRNDA 1406

Query: 933  EQHRMWSRLQEFDAWIWNSFY--LNLNAVKHGKRSYLDA-----LARCERCH--DLYWRD 983
            E+    +R Q+F+ W+W        L A+K+GK+S LD+     +A+CE  H  DL W  
Sbjct: 1407 EKFDALNRYQDFEKWMWKECINPSTLCALKYGKKSPLDSNYSEHVAQCEEKHKVDLEW-- 1464

Query: 984  EKHCKICHTTFELDFDLEERYAVHAATCRGKGDHLVSKHKILSSQLQSLKAAVHAIE-SV 1042
                                                S       +++ LKA +  IE SV
Sbjct: 1465 ---------------------------------GFSSSSDSSPLRIKLLKAHLALIEVSV 1491

Query: 1043 MPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVA--------DFVSA----INE--GW 1088
            +PE AL   WT +  K W  +L  +SS  +L+Q++         D++S+     NE  G 
Sbjct: 1492 LPE-ALQPDWTDTYRKSWGMKLHASSSAEDLIQILTLLESNIRRDYLSSDFETTNELLGL 1550

Query: 1089 LYQWNVQIADTVMGEIIAFFPTMPQTSSALALWLVKLDAIIA 1130
                   + D++    +   P +PQT++A+A+ L++LDA I+
Sbjct: 1551 SNASGCAVDDSLAAGSVPVLPWIPQTTAAVAIRLIELDASIS 1592



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 39/47 (82%)

Query: 648  EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRM 694
            +IDES+ G+ W+ GLMEGEYSDL+++E+LNALV LI +   G+SIR+
Sbjct: 1094 DIDESNSGEPWVQGLMEGEYSDLSVEERLNALVALIGVAIEGNSIRI 1140



 Score = 47.8 bits (112), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 24/171 (14%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           K KT  Q + L K Y+ E YP+++    L+A L L+ +Q++ WF  +R +D+    +  P
Sbjct: 22  KMKTASQLEILEKTYAVETYPSETLRAELSAKLGLSDRQLQMWFCHRRLKDRKTPPVKRP 81

Query: 64  SSSS-----KKLKGFHGRNRLGV-------------------VSAKIVKKQDSLIHNKHL 99
              S         G   R  + V                    S ++V +  + +     
Sbjct: 82  RKDSPVKVTSSAAGTPVREEMEVGNEHPSGSGSGSSPFGHVLESRRVVPRPGTAVARIGA 141

Query: 100 SLMVCNGTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
            +       +    ++ L+ +   +  L +  R+DGP LG+EFD LP  AF
Sbjct: 142 DMPPMKRYYEPPQPISELRAIAFVEAQLGEPLREDGPILGMEFDPLPPDAF 192


>gi|222632557|gb|EEE64689.1| hypothetical protein OsJ_19544 [Oryza sativa Japonica Group]
          Length = 1855

 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 157/587 (26%), Positives = 261/587 (44%), Gaps = 96/587 (16%)

Query: 648  EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MEDPTKAIA--- 702
            EIDES++G+ W+ GL EG+Y DL+++E+LNALV LI + + G+SIR  +E+  +A +   
Sbjct: 1011 EIDESNQGESWVQGLAEGDYCDLSVEERLNALVALIGVATEGNSIRAVLEERLEAASALK 1070

Query: 703  ---------------ESVPSVRHYGSGAKIKRALPNQHSL------PRPSWVHAGDFHG- 740
                           E   S   Y SG  +K  +  Q++L      P  + V   + +G 
Sbjct: 1071 KQMWAEAQLDKRRSREEFSSKMQYDSGMGLKTDVDQQNTLAESNLTPVHNLVKDSNGNGS 1130

Query: 741  -------------------VRETNTSRELHPLDSFSLISKS-CGKEKSSSVKDAKATEVS 780
                               V E N  R+    +  +L  +     EK+ S   +     +
Sbjct: 1131 LVNNELPVDQQSQPNACSVVHERNGVRQEFSANPENLSGQQYVTSEKTRSQLKSYIGHKA 1190

Query: 781  TDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALL 840
              LH  +S+ LG DRR NRYW F    +  DPG  R++FE S DG+W +ID+ E   AL+
Sbjct: 1191 EQLHVYRSLPLGQDRRRNRYWQFSTSASPDDPGSGRIFFE-SRDGYWRLIDSIETFDALV 1249

Query: 841  SVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPV 900
            S LD RG +E+ L   L+  E    +A+          +  A  + S   +++  +S  +
Sbjct: 1250 SSLDTRGIRESHLHSMLQSIEPTFKEAIGR--------KRCASIEPSAGRVLKNGTSEII 1301

Query: 901  SDVDNN------LALSEIGKES-LPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWN--S 951
            S   +N        LS +  +S +    +  +++G+   E+  +  R   F  W+W   +
Sbjct: 1302 SPNHSNEFGSPCSTLSGVATDSAMAYSDSFRIELGRNDVEKTAISERADLFIKWMWKECN 1361

Query: 952  FYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATC 1011
             +    A+KHGK+   + +  C+ C+ +Y  +E HC  CH TF+   ++ E    H++ C
Sbjct: 1362 NHQPTCAMKHGKKRCSELIQCCDFCYQIYLAEETHCASCHKTFKSIHNISE----HSSQC 1417

Query: 1012 RGKG------DHLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLR 1065
              K          +S + +              +E+ +P +AL   WT    K W  +L 
Sbjct: 1418 EEKRRTDPNWKMQISDYSVPVGLRLLKLLLA-TVEASVPAEALEPFWTDVYRKSWGVKLY 1476

Query: 1066 RTSSLAELLQVVA--------DFVSAINEGWLYQWNVQIADTVMGEIIA------FFPTM 1111
             TSS  E+ +++         DF+S+  E      N+   D+     +         P +
Sbjct: 1477 STSSTKEVFEMLTILEGAIRRDFLSSDFETTTELLNLSTQDSASRNTVPRSGSADVLPWV 1536

Query: 1112 PQTSSALALWLVKLDAIIAPYL-ERVNSGKEDARMRCRGIFL-FPQR 1156
            P T +A+ L L+ LD+ I+  L ++V S KE    R  G F+  P R
Sbjct: 1537 PDTVAAVVLRLLDLDSAISYTLRQKVGSNKE----RGAGEFMKLPPR 1579



 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 175/360 (48%), Gaps = 48/360 (13%)

Query: 278 KLDKGERLRQPNKEKCELAPDSVISQERLDQIAM-LVDDEELELRELEVGPNPPTCCDHI 336
           K+ + E LR+  +   + A +   +  R+ +  M L++DE LEL EL            +
Sbjct: 521 KIRQKEELRKEKEAARQKAANERATARRIAREYMELMEDERLELMELVSRSKGLPSMLSL 580

Query: 337 STKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDI 396
            +  L      R +L +FP   V++K PF  +PW SS + +  L  V+ F  T+A ++ I
Sbjct: 581 DSDTLQQLDSFRGMLRQFPSEIVRLKVPFSIKPWTSSEDNIGNLLMVWKFFITFADVLGI 640

Query: 397 CSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLA----- 451
            SFTLDEF Q+ HD DS LLG++HVALLK ++ D+E ++ R      SV+    A     
Sbjct: 641 PSFTLDEFVQSLHDYDSRLLGELHVALLKSIIKDIE-DVARTP----SVASGMTANPGGG 695

Query: 452 ---LLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLS------- 501
              ++    +  F +  W + LN LTW EILRQ  ++AG G +      E+++       
Sbjct: 696 HPQIVEGAYDWGFNILAWQRHLNLLTWPEILRQFGLSAGLGPQLRKRNAENVNNHDDNEG 755

Query: 502 ---KEMILMLKYG------------------------LRPGTLKGELFRILLEQGNNGSK 534
              +++I +L+ G                        L PGT+K   F +L  +G+ G  
Sbjct: 756 RNGEDVISILRSGSAAVNAAAKMKERGYGNRRRSRHRLTPGTVKFAAFHVLSLEGSQGLT 815

Query: 535 VCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFES 594
           + ++A   Q + L   +T++  E  IS+ LS D  LFE+ A STY ++    K+  D E+
Sbjct: 816 ILEVAEKIQKSGLRDLTTSKTPEASISAALSRDSKLFERTAPSTYCVKTPYRKDPADSEA 875



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 2   EVKR--KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           +VKR  KTP Q + L + Y+E+ YP ++    L+  L LT +Q++ WF  +R +D+
Sbjct: 57  KVKRVMKTPYQLEVLERTYTEDPYPNETMRAELSVKLGLTDRQLQMWFCHRRLKDR 112


>gi|125553311|gb|EAY99020.1| hypothetical protein OsI_20978 [Oryza sativa Indica Group]
          Length = 1384

 Score =  163 bits (413), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 160/586 (27%), Positives = 266/586 (45%), Gaps = 94/586 (16%)

Query: 648  EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MEDPTKAIA--- 702
            EIDES++G+ W+ GL EG+Y DL+++E+LNALV LI + + G+SIR  +E+  +A +   
Sbjct: 540  EIDESNQGESWVQGLAEGDYCDLSVEERLNALVALIGVATEGNSIRAVLEERLEAASALK 599

Query: 703  ---------------ESVPSVRHYGSGAKIKRALPNQHSL------PRPSWVHAGDFHG- 740
                           E   S   Y SG  +K  +  Q++L      P  + V   + +G 
Sbjct: 600  KQMWAEAQLDKRRSREEFSSKMQYDSGMGLKTDVDQQNTLAESNLTPVHNLVKDSNGNGS 659

Query: 741  -------------------VRETNTSRELHPLDSFSLISKS-CGKEKSSSVKDAKATEVS 780
                               V E N  R+    +  +L  +     EK+ S   +     +
Sbjct: 660  LVNNELPVDQQSQPNACSVVHERNGVRQEFSANPENLSGQQYVTSEKTRSQLKSYIGHKA 719

Query: 781  TDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALL 840
              LH  +S+ LG DRR NRYW F    +  DPG  R++FE S DG+W +ID+ E   AL+
Sbjct: 720  EQLHVYRSLPLGQDRRRNRYWQFSTSASPDDPGSGRIFFE-SRDGYWRLIDSIETFDALV 778

Query: 841  SVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPV 900
            S LD RG +E+ L   L+  E    +A+          +  A  + S   +++  +S  +
Sbjct: 779  SSLDTRGIRESHLHSMLQSIEPTFKEAIGR--------KRCASIEPSAGRVLKNGTSEII 830

Query: 901  SDVDNN------LALSEIGKES-LPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWN--S 951
            S   +N        LS +  +S +    +  +++G+   E+  +  R   F  W+W   +
Sbjct: 831  SPNHSNEFGSPCSTLSGVATDSAMAYSDSFRIELGRNDVEKTAISERADLFIKWMWKECN 890

Query: 952  FYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATC 1011
             +    A+KHGK+   + +  C+ C+ +Y  +E HC  CH TF+   ++ E    H++ C
Sbjct: 891  NHQPTCAMKHGKKRCSELIQCCDFCYQIYLAEETHCASCHKTFKSIHNISE----HSSQC 946

Query: 1012 RGKGDHLVS-KHKILSSQL----QSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRR 1066
              K     + K +I    +    + LK  +  +E+ +P +AL   WT    K W  +L  
Sbjct: 947  EEKRRTDPNWKMQISDDSVPVGLRLLKLLLATVEASVPAEALEPFWTDVYRKSWGVKLYS 1006

Query: 1067 TSSLAELLQVVA--------DFVSAINEGWLYQWNVQIADTVMGEIIA------FFPTMP 1112
            TSS  E+ +++         DF+S+  E      N+   D+     +         P +P
Sbjct: 1007 TSSTKEVFEMLTILEGAIRRDFLSSDFETTTELLNLSTQDSASRNTVPRSGSADVLPWVP 1066

Query: 1113 QTSSALALWLVKLDAIIAPYL-ERVNSGKEDARMRCRGIFL-FPQR 1156
             T +A+ L L+ LD+ I+  L ++V S KE    R  G F+  P R
Sbjct: 1067 DTVAAVVLRLLDLDSAISYTLRQKVGSNKE----RGAGEFMKLPPR 1108



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 176/360 (48%), Gaps = 48/360 (13%)

Query: 278 KLDKGERLRQPNKEKCELAPDSVISQERLDQIAM-LVDDEELELRELEVGPNPPTCCDHI 336
           K+ + E LR+  +   + A +   +  R+ +  M L++DE LEL EL            +
Sbjct: 50  KIRQKEELRKEKEAARQKAANERATARRIAREYMELMEDERLELMELVSRSKGLPSMLSL 109

Query: 337 STKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDI 396
            +  L      R +L +FP   V++K PF  +PW SS + +  L  V+ F  T+A ++ I
Sbjct: 110 DSDTLQQLDSFRGMLRQFPSEIVRLKVPFSIKPWTSSEDNIGNLLMVWKFFITFADVLGI 169

Query: 397 CSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLA----- 451
            SFTLDEF Q+ HD DS LLG++HVALLK ++ D+E ++ R  P   SV+    A     
Sbjct: 170 PSFTLDEFVQSLHDYDSRLLGELHVALLKSIIKDIE-DVAR-TP---SVASGMTANPGGG 224

Query: 452 ---LLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLS------- 501
              ++    +  F +  W + LN LTW EILRQ  ++AG G +      E+++       
Sbjct: 225 HPQIVEGAYDWGFNILAWQRHLNLLTWPEILRQFGLSAGLGPQLRKRNAENVNNHDDNEG 284

Query: 502 ---KEMILMLKYG------------------------LRPGTLKGELFRILLEQGNNGSK 534
              +++I +L+ G                        L PGT+K   F +L  +G+ G  
Sbjct: 285 RNGEDVISILRSGSAAVNAAAKMKERGYGNRRRSRHRLTPGTVKFAAFHVLSLEGSQGLT 344

Query: 535 VCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFES 594
           + ++A   Q + L   +T++  E  IS+ LS D  LFE+ A STY ++    K+  D E+
Sbjct: 345 ILEVAEKIQKSGLRDLTTSKTPEASISAALSRDSKLFERTAPSTYCVKTPYRKDPADSEA 404


>gi|224132876|ref|XP_002327902.1| predicted protein [Populus trichocarpa]
 gi|222837311|gb|EEE75690.1| predicted protein [Populus trichocarpa]
          Length = 1746

 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 166/355 (46%), Gaps = 41/355 (11%)

Query: 281 KGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPTCCDHISTKG 340
           K E  RQ    + + A +  I++    +   LV+DE LEL EL            +  + 
Sbjct: 467 KEELRRQREAARQKAASERAIARRMAKESLELVEDERLELMELAASSKGLPSIIPLDFET 526

Query: 341 LHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFT 400
           L    L RD L KFPP SV +K+PF  QPW+ S E +  L  V+ FL T+  ++ I  FT
Sbjct: 527 LQNLDLFRDKLTKFPPKSVLLKRPFLIQPWNGSEENIGNLLMVWRFLITFVDVLGIWPFT 586

Query: 401 LDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE-------MELGRGCPPHLSVSCKFLALL 453
           LDEF QAFHD +  LLG+IH++LLK ++ D+E         LG       +       ++
Sbjct: 587 LDEFVQAFHDYEPRLLGEIHISLLKSIIKDIEDVARTPATSLGPNQNSAANPGGGHPQIV 646

Query: 454 HSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESL----------SKE 503
                  F +  W + LNPLTW EILRQ  ++AGFG +      E             ++
Sbjct: 647 EGAYAWGFDIRSWQRHLNPLTWPEILRQFGLSAGFGPQLKKRNVEQAYLCDDNEGNDGED 706

Query: 504 MILMLKYG------------------------LRPGTLKGELFRILLEQGNNGSKVCQLA 539
           +I  L+ G                        L PGT+K   F +L  +G+ G  + ++A
Sbjct: 707 VITNLRNGAAVENAFAIMQERGFSNPRRSRHRLTPGTVKFASFHVLSLEGSKGLTILEVA 766

Query: 540 RSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFES 594
              Q + L   +T++  E  I++ LS D  LFE+ A STY +R    K+  D E+
Sbjct: 767 DKIQKSGLRDLTTSKTPEASIAAALSRDSKLFERTAPSTYCVRPPYRKDPADAEA 821



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 185/407 (45%), Gaps = 60/407 (14%)

Query: 766  EKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDG 825
            EKS S   +     + +++  +S+ LG DRR NRYW F    +  DPG  R++ E   DG
Sbjct: 1125 EKSRSQLKSVIGHRAEEMYVYRSLPLGQDRRRNRYWQFTTSASRNDPGCGRIFVEL-HDG 1183

Query: 826  HWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSD 885
             W VID+EE   ALLS LD RG +E+ L   L K E    + +   ++      H +   
Sbjct: 1184 RWRVIDSEEGFNALLSSLDVRGVRESHLHAMLHKIEVPFKETLRKRML------HASTEG 1237

Query: 886  QSELDLVREDSSSPV-----SDVDNNLALSEIGKESLP-SCGAIVLDVGKKGEEQHRMWS 939
            +S+  +  E   +       S +D+  +   I    +  +  +  +++G+   E++    
Sbjct: 1238 KSKGPIKAEAVETAAGIECGSGMDSPQSTVCIPDSDMSETSTSFTIELGRNEIEKNHALK 1297

Query: 940  RLQEFDAWIWNSFYLN--LNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTF--- 994
            R Q+F+ W+W   + +  L A+K+GK+     L  C+ CHD Y  ++ HC  CH T+   
Sbjct: 1298 RFQDFEKWMWKECFKSSVLCAMKYGKKRCTQRLGVCDYCHDTYLSEDNHCPSCHKTYDAS 1357

Query: 995  ELDFDLEERYAVHAATCRGKGDHLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTK 1054
            ++  ++ E    H A C  K                 LK       SV+PE AL   WT 
Sbjct: 1358 QVGLNISE----HVAHCERK-----------------LKV------SVLPE-ALQPVWTD 1389

Query: 1055 SAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWL---YQWNVQI-----------ADTV 1100
               K W  +L+ +SS+ +LLQ++      +   +L   Y+ + ++             + 
Sbjct: 1390 DYRKSWGMKLQSSSSVEDLLQILTLLEGGMKRDYLSSNYETSSELLRSSDPSGCAAYGSF 1449

Query: 1101 MGEIIAFFPTMPQTSSALALWLVKLDAIIAPYLERVNSGKEDARMRC 1147
              E +   P +PQT++A+AL +++ DA I+  L +     +D   R 
Sbjct: 1450 NTETVPVLPWLPQTTAAVALRVIEFDASISYMLHQKPEAHKDRSTRS 1496



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 39/48 (81%)

Query: 647 MEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRM 694
           ++IDES+ G+ W+ GL +GEYSDL+++E+L+ALV LI +   G+SIR+
Sbjct: 950 VDIDESNPGEPWVQGLADGEYSDLSVEERLSALVALIGVAIEGNSIRV 997



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 21/168 (12%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           K KT  Q + L K Y+ + YP+++    L+  L L+ +Q++ WF  +R +D+    +  P
Sbjct: 32  KMKTASQLEILEKTYAADTYPSEAVRAELSVQLGLSDRQLQMWFCHRRLKDRKAPLVKRP 91

Query: 64  SSSSKKLKGF---------------HGRNR-----LGVVSAKIVKKQDSL-IHNKHLSLM 102
              S    G                HG        LGV S + V +   + +      + 
Sbjct: 92  HKESPSPAGMPGGVEMGVGTEVGNEHGSGSASLSGLGVDSRRAVGRPTGVAVPRISADVQ 151

Query: 103 VCNGTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
                 + + +V  L+ +   +  L +  R+DGP LG+EFD LP  AF
Sbjct: 152 AMKRYYEPQQSVAELRAIAFVEAQLGEPLREDGPILGIEFDPLPPDAF 199


>gi|357130694|ref|XP_003566982.1| PREDICTED: uncharacterized protein LOC100827669 [Brachypodium
            distachyon]
          Length = 1845

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 244/556 (43%), Gaps = 92/556 (16%)

Query: 648  EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MEDPTKAI---- 701
            EIDES++G+ W+ GL EG+Y +L+++E+LNALV L+ + + G+SIR  +E+  +A     
Sbjct: 1014 EIDESYQGESWVRGLAEGDYYNLSVEERLNALVALVGVATEGNSIRAVLEERLEAANAIK 1073

Query: 702  --------------AESVPSVRHYGSGAKIKRALPNQH----SLPRPSWVHAGDFHGVRE 743
                           E   S   Y S   +K  +  +H    + P P+     D  G   
Sbjct: 1074 KQMWAEAQLDKRRSKEEFASRMQYSSYTSLKADVNPEHNATETTPTPARNIDIDTDGNMG 1133

Query: 744  TNTSRELHPLDSFSLIS--------KSCGKEKSSSVKDAKATEVS--------------- 780
               + E+  LD +S  +           G++ SS+  +  A + +               
Sbjct: 1134 AVNNTEM--LDQYSHSNAGNVSYERNGVGQDISSTPDNLSAQQYAYADKTRSQLKSYIGH 1191

Query: 781  --TDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRA 838
                L+  +S+ LG DRR NRYW F    +  DPG  R++FES  DG+W VID+EEA  +
Sbjct: 1192 RAEQLYVYRSLPLGQDRRRNRYWQFSTSASPNDPGSGRIFFES-RDGYWRVIDSEEAFDS 1250

Query: 839  LLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLV----RE 894
            L++ LD RG +EA L   L++ EA   + +       TE            DL+    R 
Sbjct: 1251 LVASLDTRGSREAQLHSMLQRIEATFKEGIKRKSNAATEQPAGRYLKNGATDLMQGSYRS 1310

Query: 895  DSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYL 954
            +  SP S       LS +  +S        +++G+   E+  +  R   F  W+W   Y 
Sbjct: 1311 EFGSPSS------TLSTVSSDSF------RIELGRNDAEKTAISKRADGFLKWMWRECYD 1358

Query: 955  N--LNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCR 1012
                 AVK+GK+     +  C  C+ +Y  +E+HC  CH  F+   +  E    H + C 
Sbjct: 1359 RKLTCAVKYGKKRCSTLIHSCCYCYQIYLAEERHCSSCHKIFKPIHNFSE----HVSQCE 1414

Query: 1013 GKGD-----HLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRT 1067
             K        +  +   +   ++ LK  +  IE+++P +AL   WT    K W  +L  T
Sbjct: 1415 EKRRTDPNWKMQIEDYSVPIGIRMLKLQLATIEAMIPSEALQPFWTDGYRKSWGVKLHST 1474

Query: 1068 SSLAELLQVVADFVSAINEGWLYQ--------WNVQIAD----TVMGEIIAFFPT-MPQT 1114
             S+ E+ Q++     AI   +L           N+ I D       G   A   T +P T
Sbjct: 1475 ESVEEIFQMLTLLEGAIRRDYLSSEFETTSEYLNLNIQDMHSQNPFGLSGASVLTWVPDT 1534

Query: 1115 SSALALWLVKLDAIIA 1130
             +A+ L +++LD  ++
Sbjct: 1535 IAAITLRMLELDYAVS 1550



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 176/371 (47%), Gaps = 40/371 (10%)

Query: 259 RLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEEL 318
           R+   LQ + +   K +Q +  + E+     K   E A    I++E ++    LV+DE L
Sbjct: 513 RMEKFLQKQSRRAEKQRQKEELRKEKEAARQKAANERATARRIAREYME----LVEDERL 568

Query: 319 ELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVK 378
           EL EL            + +  L      R +L++FPP +VK+K PF  +PW  S   + 
Sbjct: 569 ELMELAAQSKGLPSMLSLDSDTLQQLDSFRGMLSQFPPETVKLKVPFLIKPWTGSENNLG 628

Query: 379 KLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRG 438
            L  V+ FL T+A ++ + + TLDEF Q+ HD DS LLG+ HVALLK ++ D+E ++ R 
Sbjct: 629 NLLMVWKFLITFADVLGLSAVTLDEFVQSLHDYDSRLLGEFHVALLKSIIKDIE-DVART 687

Query: 439 CPPHLSVS--CKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSR 496
               L V+       ++    +  F +  W   LN LTW EILRQ  ++AGFG +     
Sbjct: 688 PSVALGVNPGGGHPQIVEGAYSWGFNIRSWQHHLNLLTWPEILRQFALSAGFGPQLKKRN 747

Query: 497 KESL----------SKEMILMLKYG-----------------------LRPGTLKGELFR 523
            E +           + +I  L+ G                       L PGT+K   F 
Sbjct: 748 AEDVFYRDENEGQDGQNVISTLRNGSAAVRAAALMKERGYTHRRSRHRLTPGTVKFAAFH 807

Query: 524 ILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRI 583
           +L  + +NG  + ++A   Q + L   +T++  E  I++ LS D  LFE+ A STY ++ 
Sbjct: 808 VLSLEESNGLTILEVAEKIQKSGLRDLTTSKTPEASIAAALSRDTKLFERTAPSTYCVKS 867

Query: 584 NTSKEADDFES 594
              K+  D E+
Sbjct: 868 PYRKDPADSEA 878


>gi|297794989|ref|XP_002865379.1| hypothetical protein ARALYDRAFT_494576 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311214|gb|EFH41638.1| hypothetical protein ARALYDRAFT_494576 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1684

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 181/374 (48%), Gaps = 47/374 (12%)

Query: 267 KRKPVAKGKQVKLDKGERLRQPNKEK----CELAPDSVISQERLDQIAMLVDDEELELRE 322
           +R+   K + ++ +K  +  +  KEK     + A +  I+++   +   L++DE LEL E
Sbjct: 404 RREKFLKKETIRAEKMRQKEEMRKEKEVARLKAANERAIARKIAKESMELIEDERLELME 463

Query: 323 LEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFK 382
           +            +  + L      RD    FPP SV++K+PF  +PW+ S E V  L  
Sbjct: 464 VAALTKGLPSMLALDFETLQNLEEYRDKQVLFPPTSVRLKKPFAVKPWNGSDENVANLLM 523

Query: 383 VFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE-----MELGR 437
           V+ FL T+A ++ +  FTLDEFAQAFHD D  L+G+IH+ LLK ++ D+E     +  G 
Sbjct: 524 VWRFLITFADVLGLWPFTLDEFAQAFHDYDPRLMGEIHIVLLKTIIKDIEGVARTLLTGV 583

Query: 438 GCPPHLSVSCKFLALLHSVENQ---EFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGS 494
           G   + + S       H VE      F +  W ++LN  TW EILRQ+ ++AG G +   
Sbjct: 584 GANQN-TASNPGGGHPHVVEGAYAWGFDIRSWRRNLNVFTWPEILRQLALSAGLGPQLKK 642

Query: 495 SRKESL----------SKEMILMLKYG------------------------LRPGTLKGE 520
              +++          S+ +I+ L+ G                        L PGT+K  
Sbjct: 643 MNIKTVSVHDDNEANNSENVIVNLRKGVAAENAFAKMQERGLSNPRRSRHRLTPGTVKFA 702

Query: 521 LFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYR 580
            F +L  +G  G  +  +A   Q + L   +T+   E  +++ LS D  LFE++A STY 
Sbjct: 703 AFHVLSLEGEKGLTILDVAEKIQKSGLRDLTTSRTPEASVAAALSRDTKLFERVAPSTYC 762

Query: 581 LRINTSKEADDFES 594
           +R +  K+A D E+
Sbjct: 763 VRASYRKDAGDAET 776



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 163/368 (44%), Gaps = 46/368 (12%)

Query: 780  STDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRAL 839
            + +L+  +S+ LG DRR NRYW F    +  DPG  R++ E  +DG W +ID+EE    L
Sbjct: 1066 AEELYVYRSLPLGQDRRRNRYWRFSASASRNDPGCGRIFVE-LQDGRWRLIDSEEGFDYL 1124

Query: 840  LSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSP 899
            +  LD RG +E+ L   L K EA   +A+   +  N  +  ++ S  S            
Sbjct: 1125 VKSLDVRGVRESHLHFMLLKIEASFKEAVRRSVEANPGLSSISSSMDS------------ 1172

Query: 900  VSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYL--NLN 957
                 +   +S   K  L    AI         E+  +  R Q F+ W+W++      L+
Sbjct: 1173 -----DTAEISTTFKIELGDSNAI---------ERCSVLQRFQSFEKWMWDNMLHPGALS 1218

Query: 958  AVKHGKRSYLDALARCERCHDLYWRDEKHCKIC---HTTFEL-DFDLEERYAVHAATCRG 1013
            A K+G +        C  C  L++ ++  C  C   H   ++ +    E+ A      RG
Sbjct: 1219 AYKYGAKQSSPLFRICRICAGLHFVEDICCPSCGQMHAGPDIAELCFAEQVAQLGDILRG 1278

Query: 1014 KGDHLVSKHKILSS-QLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAE 1072
                 + +  I S  +++ LK  +  +E+ +P + L   WT++  K W  +L  +SS  E
Sbjct: 1279 GDIGFILRSSISSPLRIRLLKVQLALVEASLPPEGLEAFWTENLRKSWGMKLMSSSSPEE 1338

Query: 1073 LLQVVADFVSAINEGWLYQWNVQIADTVMG---EIIA--------FFPTMPQTSSALALW 1121
            L QV+    +A+   +L   N +    ++G   E +A          P +P+T+  +AL 
Sbjct: 1339 LNQVLTTLEAALKRDFLSS-NFETTSELLGLQVEALANDFTCGVNVLPWIPKTTGGVALR 1397

Query: 1122 LVKLDAII 1129
            L + D+ I
Sbjct: 1398 LFEFDSSI 1405



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 649 IDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIRM 694
            DES  G+ W+ GL+EG+Y++L+ +E+LNALV LI +   G++IR+
Sbjct: 894 FDESKLGEQWVQGLVEGDYANLSSEERLNALVALIGIAIEGNTIRI 939



 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 20/160 (12%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           K KT  Q + L   Y+ E YP+++    L+  L+L+ +Q++ WF  +R +D+       P
Sbjct: 20  KMKTAAQLEVLENTYAAEPYPSEAIRADLSVKLNLSDRQLQMWFCHRRLKDRKS---TTP 76

Query: 64  SSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLS--LMVCNGTGKKKNAVTVLQ--- 118
           S   +K           V S+K       L+    L        G G     VTV++   
Sbjct: 77  SKRHRK----ELVTPTAVESSKPAVNAGDLVAGNELDSRRAARGGGGSGSGGVTVVRRFN 132

Query: 119 -----DLLTSDYI---LKKVFRKDGPPLGVEFDSLPSQAF 150
                ++    Y+   L +  R +GP LG+EFD LP  AF
Sbjct: 133 EPSSAEVRAIGYVEAQLGERLRDNGPILGMEFDPLPPGAF 172


>gi|242053937|ref|XP_002456114.1| hypothetical protein SORBIDRAFT_03g030770 [Sorghum bicolor]
 gi|241928089|gb|EES01234.1| hypothetical protein SORBIDRAFT_03g030770 [Sorghum bicolor]
          Length = 1842

 Score =  157 bits (397), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 177/371 (47%), Gaps = 40/371 (10%)

Query: 259 RLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEEL 318
           R+   LQ + +   K +Q +  + E+     K   E A    I++E ++    LV+DE L
Sbjct: 521 RMEKLLQKQSRRAEKQRQKEELRKEKEAARQKAANERATARRIAREYME----LVEDERL 576

Query: 319 ELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVK 378
           EL EL           H+ +  L      R +L++FPP +V++K PF  +PW  S + V 
Sbjct: 577 ELMELAAQNKGLPSMLHLDSDTLQQLDSFRGMLSQFPPTTVRLKLPFSIKPWTGSEDNVG 636

Query: 379 KLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRG 438
           KL  V+ F  T+  ++ +C  TLDEF Q+ HD DS LLG++HVALLK ++ D+E ++ R 
Sbjct: 637 KLLMVWKFFITFTDVLGLCPVTLDEFVQSLHDYDSRLLGELHVALLKSIIKDIE-DVART 695

Query: 439 CPPHLSVS-CKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRK 497
               L V+      ++       F +  W + LN LTW EILRQ  ++AGFG +      
Sbjct: 696 QSIALGVNPGGHPQIVEGAYAWGFNIRSWQRHLNLLTWPEILRQFALSAGFGPQLKKRTV 755

Query: 498 ESL----------SKEMILMLKYG------------------------LRPGTLKGELFR 523
           E             + +I  L+ G                        L PGT+K   F 
Sbjct: 756 EDSYYRNDNEGHDGENVISTLRNGSAAVNAAAKMKERGYTNRRRSRHRLTPGTVKFAAFH 815

Query: 524 ILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRI 583
           +L  +G+ G  + ++A   Q + L   +T++  E  I++ LS D  LFE+ A STY ++ 
Sbjct: 816 VLSLEGSKGLTILEVAEKIQKSGLRDLTTSKTPEASIAAALSRDAKLFERTAPSTYCVKS 875

Query: 584 NTSKEADDFES 594
              K+  D E+
Sbjct: 876 PYRKDPADSEA 886



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 182/401 (45%), Gaps = 48/401 (11%)

Query: 783  LHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSV 842
            L+  +S+ LG DRR NRYW F    +  DPG  R++FE S+DG W VID+EEA  +L++ 
Sbjct: 1194 LYVYRSLPLGQDRRRNRYWQFTTSASPNDPGSGRIFFE-SKDGCWRVIDSEEAFDSLVAA 1252

Query: 843  LDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVREDSSSPVSD 902
            LD RG +EA L   L+  E    +A+      + E+           D++R +  S V  
Sbjct: 1253 LDTRGSREAQLHSMLQVIEPTFKEAIKRRSA-SIELPAGRYPKNGATDMIRANYHSEVGS 1311

Query: 903  VDNNL--ALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLN--LNA 958
              +    A S+I         +  +++G+   E+  +  R  +F  W+W   Y      A
Sbjct: 1312 SSSTPFGATSDI---VTAYSDSFKVELGRNDFEKTAISKRADKFLKWMWRECYNQELTCA 1368

Query: 959  VKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRGK---- 1014
            +K+GK+   + L  C  C+ +Y  +E+HC  CH TF+  ++    ++ H   C  K    
Sbjct: 1369 MKYGKKRCSELLHSCNCCYQIYLAEERHCPSCHKTFKSIYN----FSDHTTQCEEKRRTD 1424

Query: 1015 -------GDHLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRT 1067
                    D+ V    +L      LK  +  IE+ +P +AL   WT    K W  +L  T
Sbjct: 1425 PYWKMQIADYSVPIGMVL------LKLQLVTIEAAIPSEALQPFWTDVYRKSWSVKLYTT 1478

Query: 1068 SSLAELLQVVADFVSAINEGWLYQWNVQIADTVMGEIIA------------FFPTMPQTS 1115
             S+AE  Q++     AI  G L       ++ +  + IA              P +P T+
Sbjct: 1479 KSIAETFQLLTVLEGAIRPGCLSSDFETTSECLNSQSIAPQNPVLPAGSASALPWVPDTT 1538

Query: 1116 SALALWLVKLDAIIAPYLERVNSGKEDARMRCRGIFLFPQR 1156
            SA+ L ++ LD+ I+ Y++     ++D      G   FP R
Sbjct: 1539 SAVMLRMLDLDSAIS-YVQNQKMERDDG-----GSMKFPSR 1573



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 36/46 (78%)

Query: 648  EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR 693
            +IDES++ + W+  L EG+Y DL+++E+LNALV L+ + + G+SIR
Sbjct: 1024 QIDESNQVEPWVRALAEGDYCDLSVEERLNALVALVGVATEGNSIR 1069



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 40/188 (21%)

Query: 3   VKR--KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK----- 55
           VKR  KTP Q + L K Y+ E+YP+++    L+A + L+ +Q++ WF  +R +D+     
Sbjct: 56  VKRMMKTPYQLEVLEKTYAAEQYPSEAMRLELSAKIGLSDRQLQMWFCHRRLKDRKPPTK 115

Query: 56  -------------------------------GDNGIVIPSSSSKKLKGFHGRNRLGVVSA 84
                                           D  +  P    + L   H R   G  SA
Sbjct: 116 RQRREEESALAPVMPPPPVLPAPVSVMPLASSDLMVGAPGPYDEPLHPVHSRRGAGRSSA 175

Query: 85  --KIVKKQDSLIHNKHLSLMVCNGTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEF 142
             +I        + +   +M+       +   + L+ + + +  L +  R+DGP LGVEF
Sbjct: 176 VPRISMPDIGRRYYEPTPIMIAPAIPSMQLTQSELRVINSVESQLGEPLREDGPALGVEF 235

Query: 143 DSLPSQAF 150
           D LP  AF
Sbjct: 236 DPLPPGAF 243


>gi|414873456|tpg|DAA52013.1| TPA: putative homeodomain-like transcription factor superfamily
           protein [Zea mays]
          Length = 713

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 136/411 (33%), Positives = 185/411 (45%), Gaps = 66/411 (16%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPS 64
           +K+P Q + L KFYS+ +YP   EM   A  + LTY QVR WF E+RR+++      I S
Sbjct: 21  KKSPQQIQRLEKFYSDVQYPKPEEMGEYATCVGLTYSQVRIWFKERRRKERRMEMGAIGS 80

Query: 65  SSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKKNAVTVL-QDLLTS 123
              ++   F  R+     S+       + I++   S     G         +L Q L   
Sbjct: 81  QMERQ---FSARSSGPRCSSSSSFCNQAPIYDISRSESDTWGMSTAGEESKILSQVLFPK 137

Query: 124 DYILKKVFRKDGPPLGVEFDSLPSQAFFRSKDSINSCPPLQENQTAKRKRKVSIHDELDH 183
           DYIL K+FRKDGPPLG EFD LP  A    +D+  +C    ENQ   +KRK+ I      
Sbjct: 138 DYILSKIFRKDGPPLGSEFDPLPQSAHGCIRDT--TCHHSSENQRTVKKRKI-IESTNQR 194

Query: 184 QECCTNTDHVRKHGMGKGLMTAWRVMNPNGGTVPTGIDVADRQVTVVPQMATPLSQKPPL 243
            +   NT  VRKHG+GKGLMT W  M  +     +G +  D   T   +   P      L
Sbjct: 195 SDVYENTAPVRKHGIGKGLMTVWHAMYSHNVKCQSGRNFIDE--TGCLRSLRPFDDFDGL 252

Query: 244 RKK---RAQQIVSLLKQR--------------------RLANNLQSKRKPVAKGKQVKLD 280
             +   R  Q+ S L  +                        N    RK + K  +V ++
Sbjct: 253 EDRDNGRKTQVKSHLFDKFGKYYIVTAELAIHKSCMVPTYVQNQGMTRKKIVKRSKVLVN 312

Query: 281 K---------GERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELEVGPNPPT 331
           +         G ++  P    C L+ D   S E   ++  LVDDEELEL EL+       
Sbjct: 313 RKKVPCKRVTGPKVHPPM--ACHLSVDESESLELQTELVTLVDDEELELSELQT------ 364

Query: 332 CCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFK 382
                            DLLAKFPP S+KMK+ F T+PW+SSPE VKKLF+
Sbjct: 365 -----------------DLLAKFPPQSLKMKKLFSTKPWESSPEMVKKLFQ 398



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/215 (47%), Positives = 126/215 (58%), Gaps = 10/215 (4%)

Query: 486 AGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIA 545
           +GFG KQ    +E  +KE   M KYGLRP TLKGELF +L + G+ G KV  LA+SS+I 
Sbjct: 412 SGFGPKQHLLNQEFFNKEKNQMAKYGLRPRTLKGELFALLSKAGSCGLKVSVLAKSSEII 471

Query: 546 ELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEA----DDFESDAEDIGS 601
           +LN+ S   E+E LIS  LSSDITLFEKIA S YRLR++   +          D+  +  
Sbjct: 472 DLNVSSPL-ELEQLISLALSSDITLFEKIAPSAYRLRVDPQIKGEEDSMSDSDDSGSVDE 530

Query: 602 VDDNSDDDDTCSNRDDSECNSENQRQRRPKYLNCCKSENNMLTVYMEIDESHRGDVWLSG 661
            +D S  DD        +      R  R K  N   S N       EIDES+ G+ WL  
Sbjct: 531 DEDASRSDDGSDGSQKLKFLENESRLARRKEKNAHGSPNKC----SEIDESYSGEKWLLA 586

Query: 662 LMEGEYSDLTIDEKLNALVGLIDLVS-AGSSIRME 695
           LMEGEYSDL+IDEKL+ LV LID+VS AGS  R+E
Sbjct: 587 LMEGEYSDLSIDEKLDCLVALIDVVSGAGSVPRLE 621


>gi|357128519|ref|XP_003565920.1| PREDICTED: uncharacterized protein LOC100835009 [Brachypodium
            distachyon]
          Length = 1857

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 157/574 (27%), Positives = 259/574 (45%), Gaps = 112/574 (19%)

Query: 648  EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSI------RMEDPT--- 698
            EIDES++G+ W+ GL +G+Y DL+++E+LNALV L+++ + G+S+      R+E      
Sbjct: 990  EIDESNQGESWVEGLADGDYCDLSVEERLNALVALVNVATEGNSMRAILEERLEAANALK 1049

Query: 699  ------------------------------KAIAE--------SVPSVRHY-----GSGA 715
                                          KAIA+        ++P V++      G  +
Sbjct: 1050 KQMWAESQLDKRRSREDFAGKIEHDSCMGLKAIADQENSVGECNLPPVQNLIKENDGKAS 1109

Query: 716  KIKR-ALPNQHSLPRPSWVHAGDFHGVRETN-TSRELHPLDSFSLISKSCGKEKSSSVKD 773
             +    L  QHS      ++AG+   V E N  SRE +P +S S + +    +K+ S   
Sbjct: 1110 SVNNDLLVGQHS-----QLNAGNM--VHEVNGVSRESNP-ESLS-VQQYASSDKTRSQLK 1160

Query: 774  AKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTE 833
            +     +  L+  +S+ LG DRR NRYW F    +  DPG  R++FE S DG+W +ID+ 
Sbjct: 1161 SFIGHKAEQLYVYRSLPLGQDRRLNRYWQFSTSASPNDPGSGRIFFE-SRDGYWRLIDSA 1219

Query: 834  EALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVR 893
            EA  AL++ LD RG +E+ L   L+  E+    A+  G      + H A S      ++R
Sbjct: 1220 EAFDALVASLDTRGIRESHLHSMLQSIESAFKDAI--GRRKCATVEHPAGS------ILR 1271

Query: 894  EDSSSPVSDVDNNLALSEIGKESLPSCGAIV-----------LDVGKKGEEQHRMWSRLQ 942
              SS  +S   +N    E G       G +            +++G    E+  +  R  
Sbjct: 1272 NGSSEIISPNHSN----EFGSPCSTLSGVVSDNTKVYSDSFKIELGCDDLEKVAILKRAS 1327

Query: 943  EFDAWIWN--SFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDL 1000
             F  W+W   + + +  A+K+GK+   + + +C+ C+ +Y  +E HC  CH TF+    L
Sbjct: 1328 MFLKWMWRECNNHQSTCAMKYGKKRCSELIQQCDSCYQIYSTEEMHCSSCHKTFKSVHSL 1387

Query: 1001 EERYAVHAATC----RGKGD-HLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKS 1055
             E    HA+ C    R   D  +      +  +L+ LK  + +IE  +P +AL   WT  
Sbjct: 1388 SE----HASQCDEKWRTDPDWKMQISDDSIPIRLRLLKLLLASIEVSIPAEALQPFWTDG 1443

Query: 1056 AHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQ--------WNVQIADTVMGEIIA- 1106
              K W  +L  TSS  E+ Q++     AI   +L           N    D      +A 
Sbjct: 1444 YRKSWGLKLYSTSSTKEVFQMLTVLEGAIRRNYLSSNFKTTAELLNSMAQDNSNQNSVAR 1503

Query: 1107 -----FFPTMPQTSSALALWLVKLDAIIAPYLER 1135
                   P +P T++A+ L L+ LD+ ++  L++
Sbjct: 1504 SGSADVLPWVPNTTAAVTLRLLDLDSALSCTLDQ 1537



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 169/359 (47%), Gaps = 43/359 (11%)

Query: 278 KLDKGERLRQPNKEKCELAPDSVISQERLDQIAM-LVDDEELELRELEVGPNPPTCCDHI 336
           KL + E LR+  +   + A +   +  R+ +  + L++DE LEL EL            +
Sbjct: 497 KLRQKEELRKEKEAARQKAANEKATARRIAREYLELMEDERLELMELVSRSKGLPSMLSL 556

Query: 337 STKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDI 396
            +  L      R +L +FP   V++K PF  +PW SS   +  L  V+ F  T+A I+ +
Sbjct: 557 DSDTLQQLDSFRGMLTQFPAEVVRLKIPFSVKPWISSENNIGSLLMVWKFFFTFADILGL 616

Query: 397 CSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLA----- 451
            SFTLDEF Q+ HD DS LL ++HVALLK ++ D+E  + R       V+    A     
Sbjct: 617 PSFTLDEFMQSLHDYDSRLLAELHVALLKSIIKDIE-NVARTSSDAFGVNQSSSANPGGG 675

Query: 452 ---LLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSK---------------QG 493
              ++       F +  W + L   TW EILRQ  ++AGFG +               +G
Sbjct: 676 HPQIVEGAYAWGFNILTWQRHLTYHTWPEILRQFGLSAGFGPQLKKRSVEDVYCHDDNEG 735

Query: 494 SSRKESLS---------KEMILMLKYG---------LRPGTLKGELFRILLEQGNNGSKV 535
            + ++ +S         K   LM + G         L PGT+K   F +L  +G+ G  +
Sbjct: 736 RTSQDVISTLRNGSAALKSAALMKERGYTNRRSRHRLTPGTVKFAAFHVLSLEGDKGLSI 795

Query: 536 CQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFES 594
            ++A   Q + L   +T++  E  IS+ LS D  LFE+ A STY ++    K+  D E+
Sbjct: 796 LEVAEKIQKSGLRDLTTSKTPEASISAALSRDTKLFERTAPSTYCVKAPYRKDPADSEA 854



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 41/180 (22%)

Query: 6   KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGD-------- 57
           KTP Q + L K Y+++ YP ++    LAA L+LT +Q++ WF  +R +D+          
Sbjct: 50  KTPYQLQVLEKTYADDPYPNETTRVELAAKLELTDRQLQMWFCHRRLKDRKQPVKREEEV 109

Query: 58  NGIVIPSSS--------SKKLKGF---------------HGRNRLGVV---SAKIVKKQD 91
           +  VIPS S        SK  +G                 GR+R   V   SA  + ++ 
Sbjct: 110 SVPVIPSPSVLQPSVPNSKLARGSGSTYSQQLLPCSQRGRGRDRSSAVPRISATEIARRY 169

Query: 92  SLIHNKHL-SLMVCNGTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAF 150
              H   L  L            +  +Q+L+       +  R+DGP LGV FD LP  AF
Sbjct: 170 YEPHQVMLPPLAAVQPMQGAHQMIDYVQELIG------EQLREDGPVLGVHFDPLPPGAF 223


>gi|302817814|ref|XP_002990582.1| hypothetical protein SELMODRAFT_428998 [Selaginella moellendorffii]
 gi|300141750|gb|EFJ08459.1| hypothetical protein SELMODRAFT_428998 [Selaginella moellendorffii]
          Length = 1015

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 177/381 (46%), Gaps = 60/381 (15%)

Query: 259 RLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEEL 318
           R+   LQ + + VAK +Q    K E  R+    K   A +   +++       L+DDE+L
Sbjct: 520 RMEKLLQKENQRVAKLRQ----KEEMRREKEATKLRAAYERATAKKLAKLSTGLIDDEQL 575

Query: 319 ELRELEVGPNPPTCCDHISTKGLHGCS---LCRDLLAKFPPNSVKMKQPFGTQPWDSSPE 375
           EL  +++G            +GL   S     +  L  FPP SV+MK P G  PW+ S  
Sbjct: 576 EL--MQMG---------AFVQGLISGSEFDPNKIELPMFPPASVRMKPPIGVPPWNDSNH 624

Query: 376 TVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE--- 432
            V  LF V+  L  +A ++ +  FTLDEF QA HD DS LLG+IH+ALLK L+ DV+   
Sbjct: 625 NVANLFMVWRMLTNFADVIGLWPFTLDEFVQALHDYDSRLLGEIHIALLKTLVKDVKDAS 684

Query: 433 MELGRGCPPHLSV-SCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSK 491
                G    L+V S     L+ +     F ++ W + +N LTW EILRQ  +A+G+G +
Sbjct: 685 QAAAIGSNQALAVASGGHPELVEAAYAWGFDIQEWGQHVNALTWPEILRQFALASGYGPR 744

Query: 492 --------------------------------------QGSSRKESLSKEMILMLKYGLR 513
                                                 Q   R  S  ++     K  L 
Sbjct: 745 WKKKITETAPSTPVAEGKNAEDAVANLRSGAAAANAVTQMRGRNSSRVRKQQQQHKPVLT 804

Query: 514 PGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEK 573
           PGT+K   F++L  +G+ G  + ++    Q A L   ST++  E  IS+ LS D  LFE+
Sbjct: 805 PGTVKFAAFQVLSVEGSKGLTILEVVDRVQKAGLRDLSTSKTPEASISAVLSRDTKLFER 864

Query: 574 IASSTYRLRINTSKEADDFES 594
           +A STY +R+   K  ++ E+
Sbjct: 865 VAPSTYCVRLVFRKSPEEAEA 885



 Score = 44.3 bits (103), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 34/52 (65%)

Query: 4  KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          K KTP Q + L + Y+E+KYP++     L+  L+LT +QV+ WF  +R +D+
Sbjct: 9  KMKTPSQLEILERVYAEDKYPSEIVRSELSHQLNLTDRQVKMWFCHRRLKDR 60


>gi|302803755|ref|XP_002983630.1| hypothetical protein SELMODRAFT_422901 [Selaginella moellendorffii]
 gi|300148467|gb|EFJ15126.1| hypothetical protein SELMODRAFT_422901 [Selaginella moellendorffii]
          Length = 924

 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 170/378 (44%), Gaps = 54/378 (14%)

Query: 259 RLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEEL 318
           R+   LQ + + VAK +Q    K E  R+    K   A +   +++       L+DDE+L
Sbjct: 119 RMEKLLQKENQRVAKLRQ----KEEMRREKEATKLRAAYERATAKKLAKLSTGLIDDEQL 174

Query: 319 ELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVK 378
           EL ++                 +         L  FPP SV+MK P G  PW+ S   V 
Sbjct: 175 ELMQMGAFVQGLISGSEFDPNKIE--------LPMFPPASVRMKPPIGVPPWNDSNHNVA 226

Query: 379 KLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE---MEL 435
            LF V+  L  +A ++ +  FTLDEF QA HD DS LLG+IH+ALLK L+ DV+      
Sbjct: 227 NLFMVWRMLTNFADVIGLWPFTLDEFVQALHDYDSRLLGEIHIALLKTLVKDVKDASQAA 286

Query: 436 GRGCPPHLSV-SCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSK--- 491
             G    L+V S     L+ +     F ++ W + +N LTW EILRQ  +A+G+G +   
Sbjct: 287 AIGSNQALAVASGGHPELVEAAYAWGFDIQEWGQHVNALTWPEILRQFALASGYGPRWKK 346

Query: 492 -----------------------------------QGSSRKESLSKEMILMLKYGLRPGT 516
                                              Q   R  S  ++     K  L PGT
Sbjct: 347 KITETAPSTPVAEGKNAEDAVANLRSGAAAANAVTQMRGRNSSRVRKQQQQHKPVLTPGT 406

Query: 517 LKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIAS 576
           +K   F++L  +G+ G  + ++    Q A L   ST++  E  IS+ LS D  LFE++A 
Sbjct: 407 VKFAAFQVLSVEGSKGLTILEVVDRVQKAGLRDLSTSKTPEASISAVLSRDTKLFERVAP 466

Query: 577 STYRLRINTSKEADDFES 594
           STY +R    K  ++ E+
Sbjct: 467 STYCVRPVFRKSPEEAEA 484


>gi|414881059|tpg|DAA58190.1| TPA: putative homeodomain-like transcription factor superfamily
           protein [Zea mays]
          Length = 1287

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 179/388 (46%), Gaps = 57/388 (14%)

Query: 259 RLANNLQSKRKPVAKGKQVKLDKGERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEEL 318
           R+   LQ + +   K +Q +  + E+     K   E A    I++E ++    LV+DE L
Sbjct: 520 RMEKFLQKQSRRAEKQRQKEELRKEKEAARQKAANERATARRIAREYME----LVEDERL 575

Query: 319 ELRELEVGPNPPTCCDHISTKGLHGCSLCRDLLAKFPPNSVKMKQPFGTQPWDSSPETVK 378
           E  EL           ++ +  L      R +L++FPP +V+MK PF  +PW  S + V 
Sbjct: 576 ESMELAAQNKGLPSMLYLDSDTLQQLDSFRGMLSQFPPTTVRMKLPFSIKPWTGSEDNVG 635

Query: 379 KLF----------------KVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVA 422
            L                 +V+ FL T+  ++ +C  TLDEF Q+ HD DS LLG++H+A
Sbjct: 636 NLLMYSYNFISGDILLTGLQVWKFLITFTDVLGLCPVTLDEFVQSLHDYDSRLLGELHIA 695

Query: 423 LLKLLLSDVEMELGRGCPPHLSVS--CKFLALLHSVENQEFFVEFWNKSLNPLTWTEILR 480
           LL+ ++ D+E ++ R     L V+       ++       F +  W + LN LTW EILR
Sbjct: 696 LLRSIIKDIE-DVARTPSIALGVNPGGGHPQIVEGAYAWGFNIRSWQRHLNLLTWPEILR 754

Query: 481 QVLVAAGFGSKQGSSRKESL----------SKEMILMLKYG------------------- 511
           Q  ++AGFG +      E             + +IL ++ G                   
Sbjct: 755 QFALSAGFGPQLKKRTVEDSYYRNDNEGHDGENVILTIRNGTAAVNAAAKMKERGYTNRR 814

Query: 512 -----LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSS 566
                L PGT+K   F +L  +G+NG  + ++A   Q + L   +T++  E  I++ LS 
Sbjct: 815 RSRHRLTPGTVKFAAFHVLSLEGSNGLTILEVAEKIQKSGLRDLTTSKTPEASIAAALSR 874

Query: 567 DITLFEKIASSTYRLRINTSKEADDFES 594
           D  LFE+ A STY ++    K+  D E+
Sbjct: 875 DTKLFERTAPSTYCVKSPYRKDPADSEA 902



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 783  LHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEE 834
            L+  +S+ LG DRR NRYW F    +  DPG  R++FE S+DG+W VID+EE
Sbjct: 1222 LYVYRSLPLGQDRRRNRYWQFTTSASPNDPGSGRIFFE-SKDGYWRVIDSEE 1272



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 36/46 (78%)

Query: 648  EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR 693
            +IDES++ + W+  L EG+Y DL+++E+LNALV L+ + + G+SIR
Sbjct: 1040 QIDESNQAEPWVRALAEGDYCDLSVEERLNALVALVGVATEGNSIR 1085



 Score = 41.2 bits (95), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 2/55 (3%)

Query: 3   VKR--KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           VKR  KTP Q + L K Y+ E+YP+++    L+A + L+ +Q++ WF  +R +D+
Sbjct: 55  VKRMMKTPYQLEVLEKTYAVEQYPSEAMRLELSAKIGLSDRQLQMWFCHRRLKDR 109


>gi|413948471|gb|AFW81120.1| putative homeodomain-like transcription factor superfamily protein
            [Zea mays]
          Length = 1841

 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 192/394 (48%), Gaps = 57/394 (14%)

Query: 783  LHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSV 842
            L+  +S+ LG DRR NRYW F    + YDPG  R++FE S DG+W VIDT EA  AL++ 
Sbjct: 1169 LYVYRSLPLGQDRRRNRYWQFSASSSSYDPGSGRIFFE-SRDGYWRVIDTSEAFEALVAS 1227

Query: 843  LDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTE--IRHVAQSDQSELDLVREDSSSPV 900
            LD RG +E+ L   L+  E    +A+      N E      +++  +E      +  SP 
Sbjct: 1228 LDTRGIRESHLHSILQSIEPTFKEAVERKRCANLEHPTGRTSENGSNESPNCNNEFGSPC 1287

Query: 901  SDV-----DNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLN 955
            S +     DN +A S+I K          ++VG+   E++ +  R   F  WIW   Y +
Sbjct: 1288 STLSGVASDNLMAHSDIFK----------IEVGRNEAEKNSISKRASVFLKWIWRECYSH 1337

Query: 956  LN--AVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRG 1013
             +  A+++GK+   + +  C+ C+ +Y  +E+HC  CH TF+   +  E    H++ C  
Sbjct: 1338 QSTYAMRYGKKRCPELIHSCDYCYQIYLAEERHCS-CHKTFKHIHNFLE----HSSQCEE 1392

Query: 1014 KGDHLVSKHKILSSQLQSLKAAV-----------HAIESVMPEDALVGAWTKSAHKLWVK 1062
            K      +    + ++Q++  +V             IE+++P +AL+  WT    K W  
Sbjct: 1393 K------QRTDPNWKMQTVDLSVPVGLRLLRLLLATIEALVPAEALLPFWTDGYRKSWGA 1446

Query: 1063 RLRRTSSLAELLQVVADFVSAINEGWL---YQWNVQIADTVMGEI-----------IAFF 1108
            +L   SS  E+LQ+++   SAI   +L   ++   ++ ++   +                
Sbjct: 1447 KLYSASSAEEVLQMLSVLESAIKRDYLSSNFETTTELLNSSTQDFATQNSAGGSGSATAL 1506

Query: 1109 PTMPQTSSALALWLVKLDAIIAPYLE-RVNSGKE 1141
            P +P T++A+AL L+ LDA I+  L  ++ S KE
Sbjct: 1507 PWVPDTTAAVALRLLDLDASISYTLHPKLGSNKE 1540



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 143/289 (49%), Gaps = 43/289 (14%)

Query: 348 RDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQA 407
           R +L KFPP +V++K PF  +PW +S + +  L   + F  T+  ++ + SFTLDEF QA
Sbjct: 576 RGMLGKFPPETVRLKVPFSIKPWAASEDIIGNLLMAWKFFVTFGDVLGLPSFTLDEFVQA 635

Query: 408 FHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLA--------LLHSVENQ 459
            HD DS LLG++HV+LLK ++ D+E ++ R     L V+    A        ++      
Sbjct: 636 LHDYDSRLLGELHVSLLKSVIKDIE-DVARTPSVALGVNQSSSANPGGGHPQIVEGAYAW 694

Query: 460 EFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSK----------EMILMLK 509
              +  W + LN LTW EILRQ  + AGFG +   S  E +            ++I +L+
Sbjct: 695 GINILNWQRHLNFLTWPEILRQFGLCAGFGPQLKKSDAEIVHHRDDNEGRNGVDVISILR 754

Query: 510 YG------------------------LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIA 545
            G                        L PGT+K   F +L  +G+ G  + ++A   Q +
Sbjct: 755 NGSAAVKAAALMKERGYTNRRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILEVAEKIQKS 814

Query: 546 ELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFES 594
            L   +T++  E  IS+ LS D  LFE+ A STY ++    K+ DD E+
Sbjct: 815 GLRDLTTSKTPEASISAALSRDTKLFERTAPSTYCVKTPYRKDPDDSEA 863



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 39/47 (82%)

Query: 647  MEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR 693
            +EIDES++G+ W+ GL EG+Y DL++DE+LNALV LI + + G+SIR
Sbjct: 986  IEIDESNQGESWVQGLAEGDYCDLSVDERLNALVALIAVANEGNSIR 1032



 Score = 44.7 bits (104), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 2/55 (3%)

Query: 3  VKR--KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          VKR  KTP Q + L + Y+E+ YP +++   L+  L+LT +Q++ WF  +R +D+
Sbjct: 43 VKRVMKTPYQLEVLERTYAEDSYPNETKRAELSVQLNLTDRQLQMWFCHRRLKDR 97


>gi|413950870|gb|AFW83519.1| hypothetical protein ZEAMMB73_389748 [Zea mays]
          Length = 699

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 142/281 (50%), Gaps = 37/281 (13%)

Query: 350 LLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFH 409
           ++++FPP +VKMK PF  +PW  S + + KL  V+ FL T+  ++ +C  TLDEF Q+ H
Sbjct: 15  MVSQFPPATVKMKLPFSIKPWTGSEDNIGKLLMVWKFLITFTDVLGLCPVTLDEFVQSLH 74

Query: 410 DKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVS--CKFLALLHSVENQEFFVEFWN 467
           D DS LLG++HVALLK ++ D+E ++ R     L V+       ++    +  F +  W 
Sbjct: 75  DYDSRLLGELHVALLKSIIKDIE-DVARTPSIALGVNPGGGHPQIVEGAYSWGFDIRSWQ 133

Query: 468 KSLNPLTWTEILRQVLVAAGFGSKQGSSRKESL----------SKEMILMLKYG------ 511
           + LN LTW EILRQ  ++AG G +      E             + +IL L+ G      
Sbjct: 134 RHLNLLTWPEILRQFALSAGSGPQLKKRTVEDSHYHYDNEGHDGENVILALRNGTAAVNA 193

Query: 512 ------------------LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTT 553
                             L PGT+K   F +L  +G+NG  +  +A   Q + L   +T+
Sbjct: 194 VAKMKERGYTNRRRSRHRLTPGTVKFAAFHVLSLEGSNGLTILDVAEKIQKSGLRDLTTS 253

Query: 554 EEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFES 594
           +  E  I++ LS D  LFE+ A STY L+    K+  D E+
Sbjct: 254 KTPEASIAAALSRDAKLFERTAPSTYCLKSPYRKDPADSEA 294



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 48/234 (20%)

Query: 648 EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR-------------- 693
           +IDES++ + W+  L EG+Y DL+++E+LNALV L+ + + G+SIR              
Sbjct: 432 QIDESNQIEPWVCALAEGDYCDLSVEERLNALVALVGVATEGNSIRGVLEERLELANALK 491

Query: 694 ------MEDPTKAIAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRETNTS 747
                 ++   +   E   S   Y SG   K  +  ++++   +   A D +   + +  
Sbjct: 492 KQMWAEVQLDKRRFKEEFASRVQYNSGMSFKPDIYQENNMTEITSTRACDAYKENDGHVG 551

Query: 748 ---------------------------RELHPLDSFSLISKSCGKEKSSSVKDAKATEVS 780
                                      +E+H     S + +    +K+ S   +     +
Sbjct: 552 TINNCEMLDQHSQGNAGGITYDRNVVGQEIHATPDTSYVQQYAYADKTRSQLKSYIGHRA 611

Query: 781 TDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEE 834
             L+  +S+ LG DRR NRYW F    +  DPG  R++FE SEDG W VID+E+
Sbjct: 612 EQLYVYRSLPLGQDRRRNRYWQFTTSASPNDPGSGRIFFE-SEDGCWRVIDSED 664


>gi|413948472|gb|AFW81121.1| putative homeodomain-like transcription factor superfamily protein
            [Zea mays]
          Length = 1431

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 192/394 (48%), Gaps = 57/394 (14%)

Query: 783  LHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSV 842
            L+  +S+ LG DRR NRYW F    + YDPG  R++FE S DG+W VIDT EA  AL++ 
Sbjct: 759  LYVYRSLPLGQDRRRNRYWQFSASSSSYDPGSGRIFFE-SRDGYWRVIDTSEAFEALVAS 817

Query: 843  LDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTE--IRHVAQSDQSELDLVREDSSSPV 900
            LD RG +E+ L   L+  E    +A+      N E      +++  +E      +  SP 
Sbjct: 818  LDTRGIRESHLHSILQSIEPTFKEAVERKRCANLEHPTGRTSENGSNESPNCNNEFGSPC 877

Query: 901  SDV-----DNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLN 955
            S +     DN +A S+I K          ++VG+   E++ +  R   F  WIW   Y +
Sbjct: 878  STLSGVASDNLMAHSDIFK----------IEVGRNEAEKNSISKRASVFLKWIWRECYSH 927

Query: 956  LN--AVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRG 1013
             +  A+++GK+   + +  C+ C+ +Y  +E+HC  CH TF+   +  E    H++ C  
Sbjct: 928  QSTYAMRYGKKRCPELIHSCDYCYQIYLAEERHCS-CHKTFKHIHNFLE----HSSQCEE 982

Query: 1014 KGDHLVSKHKILSSQLQSLKAAV-----------HAIESVMPEDALVGAWTKSAHKLWVK 1062
            K      +    + ++Q++  +V             IE+++P +AL+  WT    K W  
Sbjct: 983  K------QRTDPNWKMQTVDLSVPVGLRLLRLLLATIEALVPAEALLPFWTDGYRKSWGA 1036

Query: 1063 RLRRTSSLAELLQVVADFVSAINEGWL---YQWNVQIADTVMGEI-----------IAFF 1108
            +L   SS  E+LQ+++   SAI   +L   ++   ++ ++   +                
Sbjct: 1037 KLYSASSAEEVLQMLSVLESAIKRDYLSSNFETTTELLNSSTQDFATQNSAGGSGSATAL 1096

Query: 1109 PTMPQTSSALALWLVKLDAIIAPYLE-RVNSGKE 1141
            P +P T++A+AL L+ LDA I+  L  ++ S KE
Sbjct: 1097 PWVPDTTAAVALRLLDLDASISYTLHPKLGSNKE 1130



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 143/289 (49%), Gaps = 43/289 (14%)

Query: 348 RDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQA 407
           R +L KFPP +V++K PF  +PW +S + +  L   + F  T+  ++ + SFTLDEF QA
Sbjct: 166 RGMLGKFPPETVRLKVPFSIKPWAASEDIIGNLLMAWKFFVTFGDVLGLPSFTLDEFVQA 225

Query: 408 FHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLA--------LLHSVENQ 459
            HD DS LLG++HV+LLK ++ D+E ++ R     L V+    A        ++      
Sbjct: 226 LHDYDSRLLGELHVSLLKSVIKDIE-DVARTPSVALGVNQSSSANPGGGHPQIVEGAYAW 284

Query: 460 EFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSK----------EMILMLK 509
              +  W + LN LTW EILRQ  + AGFG +   S  E +            ++I +L+
Sbjct: 285 GINILNWQRHLNFLTWPEILRQFGLCAGFGPQLKKSDAEIVHHRDDNEGRNGVDVISILR 344

Query: 510 YG------------------------LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIA 545
            G                        L PGT+K   F +L  +G+ G  + ++A   Q +
Sbjct: 345 NGSAAVKAAALMKERGYTNRRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILEVAEKIQKS 404

Query: 546 ELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFES 594
            L   +T++  E  IS+ LS D  LFE+ A STY ++    K+ DD E+
Sbjct: 405 GLRDLTTSKTPEASISAALSRDTKLFERTAPSTYCVKTPYRKDPDDSEA 453



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 39/47 (82%)

Query: 647 MEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR 693
           +EIDES++G+ W+ GL EG+Y DL++DE+LNALV LI + + G+SIR
Sbjct: 576 IEIDESNQGESWVQGLAEGDYCDLSVDERLNALVALIAVANEGNSIR 622


>gi|413946505|gb|AFW79154.1| putative homeodomain-like transcription factor superfamily protein
           [Zea mays]
          Length = 1832

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 42/288 (14%)

Query: 348 RDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQA 407
           R +L KFPP +V++K PF  +PW  S + +  L  V+ F  T+  ++ + SFTLDEF QA
Sbjct: 579 RGMLGKFPPETVRLKVPFSIKPWADSEDIIGNLLMVWKFFVTFGDVLGLPSFTLDEFVQA 638

Query: 408 FHDKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLA--------LLHSVENQ 459
            HD DS LLG++H+ALLK ++ D+E ++ R     L V+    A        ++      
Sbjct: 639 LHDYDSRLLGELHIALLKSIIKDIE-DVARTPSVALGVNQSSSANPGGGHPQIVEGAYAW 697

Query: 460 EFFVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSK----------EMILMLK 509
              +  W   LN LTW EILRQ  + AGFG +   S  E +            ++I +L+
Sbjct: 698 GINILNWQHHLNFLTWPEILRQFGLCAGFGPQLKKSNAEIVHHRDNNEVHNGVDVISILR 757

Query: 510 YG-----------------------LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAE 546
            G                       L PGT+K   F +L  +G+ G  + ++A   Q + 
Sbjct: 758 NGSAAVKAAALMKERGYTNRRSRHRLTPGTVKFAAFYVLSLEGSRGLTILEVAEKIQKSG 817

Query: 547 LNLESTTEEVELLISSTLSSDITLFEKIASSTYRLRINTSKEADDFES 594
           L   +T++  E  +S+ LS D  LFE+ A STY ++    K+ DD E+
Sbjct: 818 LRDLTTSKTPEASVSAALSRDTKLFERTAPSTYCVKTPYRKDPDDSEA 865



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 174/378 (46%), Gaps = 49/378 (12%)

Query: 783  LHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSV 842
            L+  +S+ LG DRR NRYW F    + YDPG  RV+FE S DG+W VID+ EA  AL+S 
Sbjct: 1174 LYVYRSLPLGQDRRRNRYWQFSASSSSYDPGSGRVFFE-SRDGYWRVIDSSEAFEALVSS 1232

Query: 843  LDDRGRQEALLIESLEKREAFLCQAMS-SGLVNNTEIRHVAQSDQSELDLVREDSSSPVS 901
            LD RG +E+ L   L+  E    +A+     V+         +  +E      +  SP S
Sbjct: 1233 LDTRGIRESHLHSMLQSIEPTFREAVERKKCVSLEHTTGWTDNGSNESPNCNNEFGSPCS 1292

Query: 902  DV-----DNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYLNL 956
             +     DN +A S+  K          +++G    E+  +  R   F  W+W   Y + 
Sbjct: 1293 TLSGVASDNLMAYSDTFK----------IEIGHNEAEKSSISKRASVFLKWMWRECYCHQ 1342

Query: 957  N--AVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRGK 1014
            +   +K+GK+   + +  C+ C+ +Y  +E+HC  CH +F+   +  E    H + C   
Sbjct: 1343 STYTMKYGKKRCPELIQSCDHCYQIYLAEEQHCSSCHKSFKPIHNFLE----HLSQCEDN 1398

Query: 1015 GDHLVSKHKILSSQLQSLKAAV---------HAIESVMPEDALVGAWTKSAHKLWVKRLR 1065
                   +    +Q+  L   V           IE+ +P +AL+  WT    K W  +L 
Sbjct: 1399 Q----RTNPSWKTQIVGLSVPVGLRLLRLLLATIEASVPAEALLPFWTDLYRKSWGVKLY 1454

Query: 1066 RTSSLAELLQVVADFVSAINEGW----------LYQWNVQIA--DTVMGEIIA-FFPTMP 1112
              SS  E+LQ+++   SAI   +          L   N Q A  ++V G   A   P +P
Sbjct: 1455 SASSAEEVLQMLSVLESAIKRDYLSSNFETTTELLNSNTQDATQNSVGGSGSATILPWVP 1514

Query: 1113 QTSSALALWLVKLDAIIA 1130
             T++A+AL L+ LD  I+
Sbjct: 1515 DTTAAVALRLLDLDTSIS 1532



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 37/46 (80%)

Query: 648  EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR 693
            EIDES++G+ W+ GL EG+Y DL++DE+LNA V LI + + G+SIR
Sbjct: 989  EIDESNQGESWVQGLAEGDYCDLSVDERLNAFVALIGVATEGNSIR 1034



 Score = 45.1 bits (105), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 2/55 (3%)

Query: 3   VKR--KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           VKR  KTP Q + L + Y+E+ YP +++   L+  L+LT +Q++ WF  +R +D+
Sbjct: 48  VKRVMKTPYQLEVLERTYAEDSYPNETKRAELSVQLNLTDRQLQMWFCHRRLKDR 102


>gi|147782899|emb|CAN76810.1| hypothetical protein VITISV_044061 [Vitis vinifera]
          Length = 1496

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 240/533 (45%), Gaps = 102/533 (19%)

Query: 648  EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR--MEDPTKAIAESV 705
            +IDES+ G+ W  GLMEGEYSDL+++E+LNALV LI +   G+SIR  +E   +   E+ 
Sbjct: 744  DIDESNSGEPWXQGLMEGEYSDLSVEERLNALVALIGVAIEGNSIRIVLERLFQERLEAA 803

Query: 706  PSVRH--YGSGAKIKRALPNQH-----SLPRPSWVHAGDFHGVRETNTSRELHPLDSFSL 758
             +++   +      KR +  ++      + R  W  A   +   +    R         +
Sbjct: 804  NALKKQMWAEAQLDKRRMKEEYVMKIVGITRLLW--AIRLNRXLQCPRQRAGKVQCYLDM 861

Query: 759  ISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVY 818
            + KS   +  S +   KA E    ++  +S+ LG DRR NRYW F+   +  DP   R++
Sbjct: 862  LQKSHASQLKSYIGH-KAEE----MYVYRSLPLGQDRRRNRYWQFITSASRNDPNSGRIF 916

Query: 819  FESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAM---------- 868
             E   +G W +ID+EE   AL++ LD RG +EA L   L++ E    + +          
Sbjct: 917  VE-LRNGCWRLIDSEEGFDALVASLDARGVREAHLQSMLQRIEISFKETVRRNLQLSSIG 975

Query: 869  -SSGLVNNTEIRHVAQSDQSELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDV 927
              SG    TE   +A+     +D+   DS S    V N+ A         PS  +  +++
Sbjct: 976  RQSGGAVKTEDSEMARPTGCSVDI---DSPSSTVCVSNSDATE-------PSA-SFSIEL 1024

Query: 928  GKKGEEQHRMWSRLQEFDAWIWNSFY--LNLNAVKHGKR--------SYLDALARCERCH 977
            G+   E+    +R Q+F+ W+W        L A+K+GK+        +Y + +A+CE  H
Sbjct: 1025 GRNDAEKFDALNRYQDFEKWMWKECINPSTLCALKYGKKRTYSPLDSNYSEHVAQCEEKH 1084

Query: 978  --DLYWRDEKHCKICHTTFELDFDLEERYAVHAATCRGKGDHLVSKHKILSSQLQSLKAA 1035
              DL W                                      S       +++ LKA 
Sbjct: 1085 KVDLEW-----------------------------------GFSSSSDSSPLRIKLLKAH 1109

Query: 1036 VHAIE-SVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVA--------DFVSA--- 1083
            +  IE SV+PE AL   WT +  K W  +L  +SS  +L+Q++         D++S+   
Sbjct: 1110 LALIEVSVLPE-ALQPDWTDTYRKSWGMKLHASSSAEDLIQILTLLESNIRRDYLSSDFE 1168

Query: 1084 -INE--GWLYQWNVQIADTVMGEIIAFFPTMPQTSSALALWLVKLDAIIAPYL 1133
              NE  G        + D++    +   P +PQT++A+A+ L++LDA I+  L
Sbjct: 1169 TTNELLGLSNASGCAVDDSLAAGSVPVLPWIPQTTAAVAIRLIELDASISYML 1221



 Score =  114 bits (286), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 137/307 (44%), Gaps = 74/307 (24%)

Query: 382 KVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE-------ME 434
           +V+ FL T++ ++ +  FT+DEF QAFHD D  LLG+IHVALL+ ++ D+E       + 
Sbjct: 338 RVWRFLITFSDVLGLWPFTMDEFVQAFHDYDPRLLGEIHVALLRSIIKDIEDVARTPSIG 397

Query: 435 LGR---------GCPPHL---SVSCKF-------LALLHSVENQEFFVEFWNKSLNPLTW 475
           LG          G  P +      C F       + +L+      F +  W + LNPLTW
Sbjct: 398 LGANQNSAANPGGGHPQIVEGDPGCLFSSLLVFDVGILYQAYAWGFDIRSWQRHLNPLTW 457

Query: 476 TEILRQVLVAAGFGSKQGSSRKESL----------SKEMILMLKYG-------------- 511
            EILRQ  ++AGFG K      E             +++I  L+ G              
Sbjct: 458 PEILRQFALSAGFGPKLKKRNVEETYLRDDNEGNDCEDIITNLRSGAAAENAVAIMQERG 517

Query: 512 ----------LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLIS 561
                     L PGT+K   F +L  +G+ G  + ++A   Q + L   +T++  E  I+
Sbjct: 518 FSNPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILEVADKIQKSGLRDLTTSKTPEASIA 577

Query: 562 STLSSDITLFEKIASSTYRLRINTSKEADD--------------FESDAEDIGSVDDNSD 607
           + LS D  LFE+ A STY +R    K+  D              F+S   D    DD   
Sbjct: 578 AALSRDGKLFERTAPSTYCVRPAYRKDPADADAILSAAREKIQIFKSGCSDGEEADDVER 637

Query: 608 DDDTCSN 614
           D+D+ S+
Sbjct: 638 DEDSESD 644


>gi|302811657|ref|XP_002987517.1| hypothetical protein SELMODRAFT_447019 [Selaginella moellendorffii]
 gi|300144671|gb|EFJ11353.1| hypothetical protein SELMODRAFT_447019 [Selaginella moellendorffii]
          Length = 1495

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 178/382 (46%), Gaps = 60/382 (15%)

Query: 265 QSKRKPVAKGKQVKLDK----GERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELEL 320
           Q + + +A+ +Q +L+K     E  RQ    K + A +   +++       L+DDE+LEL
Sbjct: 415 QDRLERLAQKEQQRLEKLRLKEEVRRQKEAAKLQAAYERATAKKLAKLSTGLMDDEQLEL 474

Query: 321 RELEVGPNPPTCCDHISTKGLHGCSL---CRDLLAKFPPNSVKMKQPFGTQPWDSSPETV 377
             +++G         + +  + G S     +  L K+PP SV+MK+  G  PWDS  + V
Sbjct: 475 --MQMG----AFVQGLVSGDMEGGSAFDPSKVELKKYPPASVRMKKVLGVSPWDSV-QNV 527

Query: 378 KKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE----- 432
             L  V+ FL T++  + +  FT+DE  Q  HD DS LL + ++ALL+ L+ DVE     
Sbjct: 528 SNLLMVWGFLTTFSDAIGLWPFTVDELVQGLHDFDSRLLNETYIALLRTLIRDVEDAAQA 587

Query: 433 MELGRGCPPH-LSVSC-KFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGS 490
              G     H ++V+      ++ +     F ++ W + ++PLTW EILRQ  +AAG+G 
Sbjct: 588 AASGTAGSQHAIAVAAGGHPQIVEAAYTWGFDIQEWGQHMSPLTWPEILRQFALAAGYGP 647

Query: 491 KQGSSRKESLSK------------EMILMLKYG--------------------------- 511
           +     +   +K              I  L+ G                           
Sbjct: 648 RWKKKTQSPDAKPDCIEIHDGHNANAIATLRSGAAAVNAVALMRGKHGTRLKVRKGQTPK 707

Query: 512 LRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLF 571
           L PGT+K   F +L  QG+ G  + +L    Q + L   S+++  E  IS+ LS D  LF
Sbjct: 708 LTPGTVKYAAFHVLSIQGSKGLTILELTDRIQKSGLRDLSSSKTPEASISAALSRDTYLF 767

Query: 572 EKIASSTYRLRINTSKEADDFE 593
           E++A STY +R    ++ DD E
Sbjct: 768 ERVAPSTYCVRSPFRRDPDDAE 789



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 150/316 (47%), Gaps = 40/316 (12%)

Query: 830  IDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSEL 889
            ID  +AL AL++ LD RG +EA L   L      + +AM S          +AQS     
Sbjct: 948  IDESQALDALMACLDTRGAREASLYNILTHIGGPVRKAMKS----------LAQSRAYVE 997

Query: 890  DLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIW 949
                +   SP S V      S+   E +PS  AI +++G+   E      R ++ D W+W
Sbjct: 998  SSKGKAEGSPSSGV---FGPSDASPE-VPS--AIPVELGRSTLEIQHAMDRFKDLDRWLW 1051

Query: 950  NSFYL----NLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYA 1005
            N        NL A+  G +  ++ LA CE CH LYW DE HC  CH   E       +++
Sbjct: 1052 NRCLARGGKNLKALSLGNKRDVEMLATCELCHGLYWPDENHCPYCHAMVE-----SSKFS 1106

Query: 1006 VHAATCRGKGDHLVSK----HKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWV 1061
             H   C  K   L +K    +++L S+LQ LK  + ++E  +P +A   +WT  + ++W 
Sbjct: 1107 SHVRECESK---LEAKQGIGYQLLPSRLQLLKQLLLSVEVAVPAEAFKDSWTSDSRRIWC 1163

Query: 1062 KRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMGEII-------AFFPTMPQT 1114
              ++  SS +ELL+ + +  S ++E W+   + + A+  +              P +PQT
Sbjct: 1164 SNVKAASSSSELLEALTELESCVDENWISS-SFETAEKALSTTALGSNSRRKNLPWIPQT 1222

Query: 1115 SSALALWLVKLDAIIA 1130
            ++A+AL L   DA IA
Sbjct: 1223 TAAVALRLSAFDAAIA 1238



 Score = 43.9 bits (102), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 4  KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRD-KGD 57
          K KTP Q + L + Y+E+KYP++     L+  L LT +Q++ WF  +R +D KGD
Sbjct: 22 KMKTPSQLEILERVYAEDKYPSEVVRAELSTKLSLTDRQLQMWFCHRRLKDRKGD 76


>gi|302812110|ref|XP_002987743.1| hypothetical protein SELMODRAFT_447089 [Selaginella moellendorffii]
 gi|300144635|gb|EFJ11318.1| hypothetical protein SELMODRAFT_447089 [Selaginella moellendorffii]
          Length = 1182

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 178/376 (47%), Gaps = 60/376 (15%)

Query: 271 VAKGKQVKLDK----GERLRQPNKEKCELAPDSVISQERLDQIAMLVDDEELELRELEVG 326
           +A+ +Q +L+K     E  RQ    K + A +   +++       L+DDE+LEL  +++G
Sbjct: 421 LAQKEQQRLEKLRLKEEVRRQKEAAKLQAAYERATAKKLAKLSTGLMDDEQLEL--MQMG 478

Query: 327 PNPPTCCDHISTKGLHGCSL---CRDLLAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKV 383
                    + +  + G S     +  L K+PP SV+MK+  G  PWDS  + V  L  V
Sbjct: 479 ----AFVQGLVSGDMEGGSAFDPSKVELKKYPPASVRMKKVLGVSPWDSV-QNVSNLLMV 533

Query: 384 FHFLCTYAGIVDICSFTLDEFAQAFHDKDSMLLGKIHVALLKLLLSDVE-----MELGRG 438
           + FL T++  + +  FT+DE  Q  HD DS LL + ++ALL+ L+ DVE        G  
Sbjct: 534 WGFLTTFSDAIGLWPFTVDELVQGLHDFDSRLLNETYIALLRTLIRDVEDAAQAAASGTA 593

Query: 439 CPPH-LSVSC-KFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSK----- 491
              H ++V+      ++ +     F ++ W + ++PLTW EILRQ  +AAG+G +     
Sbjct: 594 GSQHAIAVAAGGHPQIVEAAYTWGFDIQEWGQHMSPLTWPEILRQFALAAGYGPRWKKKT 653

Query: 492 QGSSRKE----------------------SLSKEMILMLKYGLR------------PGTL 517
           Q    K                       +++   ++  K+G R            PGT+
Sbjct: 654 QSPDAKPDCIEIHDGHNANAIATLRSGAAAVNAVALMRGKHGTRLKVRKGQTPKLTPGTV 713

Query: 518 KGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASS 577
           K   F +L  QG+ G  + +L    Q + L   S+++  E  IS+ LS D  LFE++A S
Sbjct: 714 KYAAFHVLSIQGSKGLTILELTDRIQKSGLRDLSSSKTPEASISAALSRDTYLFERVAPS 773

Query: 578 TYRLRINTSKEADDFE 593
           TY +R    ++ DD E
Sbjct: 774 TYCVRSPFRRDPDDAE 789



 Score = 43.5 bits (101), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 4  KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRD-KGD 57
          K KTP Q + L + Y+E+KYP++     L+  L LT +Q++ WF  +R +D KGD
Sbjct: 22 KMKTPSQLEILERVYAEDKYPSEVVRAELSTKLSLTDRQLQMWFCHRRLKDRKGD 76


>gi|384251194|gb|EIE24672.1| hypothetical protein COCSUDRAFT_46901 [Coccomyxa subellipsoidea
           C-169]
          Length = 1406

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 164/351 (46%), Gaps = 37/351 (10%)

Query: 379 KLFKVFHFLCTYAGIVDICSFTLDEF-AQAFHDKDSMLLGKIHVALLKLLLSDVE----- 432
           +L  V+ FL ++  ++ +   T+DE  A     + S LLG+IHV LL+LL +D+E     
Sbjct: 467 ELLMVWAFLHSFGELLGLWPATVDELLAAVVLGERSRLLGEIHVGLLRLLQADMEEAHAS 526

Query: 433 -MELGRGCPPHLSVSCKFLA-LLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGS 490
               G G    L  +    A  L       F V+ W   LN LTW E+LR+  +AAG G 
Sbjct: 527 GATQGGGPSSGLDRAVAMSAGWLEEAWAWGFDVDIWRAHLNALTWPEVLREFAIAAGLGR 586

Query: 491 KQGSSRKESLSK-----EMILM-----LKYGLRP----GTLKGELFRILLEQGNNGSKVC 536
           K+   RKE+  K     E ++      LK  L P    GT+K   +++L E G +G  + 
Sbjct: 587 KRPKPRKEARPKMGTEGEDVVADEAGNLKLRLPPRYAVGTVKAAAWQVLAEAGPDGLGIT 646

Query: 537 QLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLR--IN---------- 584
           ++A+  Q   L    T+   E  +++ LS D+ +F + A +TY L   +N          
Sbjct: 647 EIAKRIQKQGLRDLRTSRTPEASVAAALSRDV-VFGRTAPATYGLNSLVNNMKLAGLPAP 705

Query: 585 -TSKEADDFESDAEDIGSVDDNSDDDDTCSNRDDSECNSENQRQRRPKYLNCCKSENNML 643
             S + +  E+ ++  G V     ++   +++          +Q      +  +S+++  
Sbjct: 706 AASADTEKKEAASDAAGEVKAEVKEEPQGTDKAAGASADAIAKQEGDANAHGHESDDDSD 765

Query: 644 TVYMEIDES-HRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR 693
           +   E +E   +G+ W++ L   EY +L+++ ++ A+V L+ L   G S+R
Sbjct: 766 SEDEEPEEDVVQGEPWVTALETCEYGELSMEMRMAAIVALMHLALDGPSVR 816



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)

Query: 791  LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
            LG DRRYNRYW         + G  R++ E  +   + ++   + L  L+  L+ RG +E
Sbjct: 944  LGQDRRYNRYWRL---AAGSEAGSGRIFVELQDTQTYRILGQPDTLETLMGALEKRGARE 1000

Query: 851  ALLIESLEKREAFLCQAMSS 870
              L  SL + +  + Q M +
Sbjct: 1001 GALYNSLLRHKDSILQGMPA 1020



 Score = 41.6 bits (96), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 28/50 (56%)

Query: 6  KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          KTPLQ +AL   YS    P+    + L   + LT  QV+ WF  +RR+DK
Sbjct: 35 KTPLQKEALEAAYSINPLPSDEVRKALGERIGLTAHQVQIWFSHRRRKDK 84


>gi|294462087|gb|ADE76596.1| unknown [Picea sitchensis]
          Length = 188

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 8/163 (4%)

Query: 922  AIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFY--LNLNAVKHGKRSYLDALARCERCHDL 979
            +  +++G+   E+  +  R ++F+ WIW       +L A K  K+  ++ L  C+ CH++
Sbjct: 4    SFTIELGRNNAEKVHVLERYKDFEKWIWIECLESSSLRASKSRKKRGIELLRTCDGCHEV 63

Query: 980  YWRDEKHCKICHTTFELDFDLEERYAVHAATCRGKGDHLVSKHKI------LSSQLQSLK 1033
            YW  +KHC  CH TFE  F  E +++ H   C  K     +  ++        S++Q LK
Sbjct: 64   YWSKDKHCSCCHGTFEGSFRFEVKFSQHVLECEEKRRRNDTNWRLQGPTWSFPSRIQLLK 123

Query: 1034 AAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQV 1076
            A + A+E  +P DAL   WT+   + W   LR  +S AELLQ+
Sbjct: 124  AVIAAVEVSIPSDALKPFWTEGYRRSWGLTLRSATSPAELLQL 166


>gi|147856402|emb|CAN80318.1| hypothetical protein VITISV_009814 [Vitis vinifera]
          Length = 771

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/78 (62%), Positives = 59/78 (75%), Gaps = 1/78 (1%)

Query: 482 VLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILL-EQGNNGSKVCQLAR 540
           VLVAAGFGS++G+ RKE+L KE+  M+KYGLR G LKGELF I L  QGN+G  V  L+R
Sbjct: 247 VLVAAGFGSRKGTLRKEALDKELNSMVKYGLRLGILKGELFSIYLSNQGNDGMTVPDLSR 306

Query: 541 SSQIAELNLESTTEEVEL 558
              I+ELNL  TTEE+EL
Sbjct: 307 CVHISELNLADTTEELEL 324


>gi|414881058|tpg|DAA58189.1| TPA: hypothetical protein ZEAMMB73_972839 [Zea mays]
          Length = 598

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 25/326 (7%)

Query: 835  ALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDLVRE 894
            A  +LL+ LD RG +EA L   L+  E    +A+   +  + E+           D++R 
Sbjct: 26   AFDSLLAALDTRGTREAQLHSMLQVIEPTFKEAIKRNV--SIELSAGRYPKNGATDMIRA 83

Query: 895  DSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWNSFYL 954
            +  S V    +  + +     +     +  +++G+   E+  +  R   F  W+W  FY 
Sbjct: 84   NYHSEVGSSSSTPSATSDSITAYSD--SFKVELGRNDFEKTAISKRADIFLKWMWREFYN 141

Query: 955  N--LNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHAATCR 1012
                 A+K+GK+   + L  C  C+ +Y  +E+HC  CH TF+  ++  +    H   C 
Sbjct: 142  QELTCAMKYGKKRCSELLHSCNCCYQIYLAEERHCSSCHKTFKSIYNFSD----HTTQCE 197

Query: 1013 GKGDHLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAE 1072
             K      +       +Q+   +V    + +P +AL   WT    K W  +L  T S+AE
Sbjct: 198  EK------QRTEPFWNMQNTDYSVPIGMAYIPSEALQPFWTDVYRKSWSVKLYTTKSIAE 251

Query: 1073 LLQVVADFVSAINEGWLYQWNVQIADTVMGEI--IAFFPTMPQTSSALALWLVKLDAIIA 1130
            + Q++     AI    L   + + ++ +  ++   +  P +P T+SA+ L ++ LD+ I 
Sbjct: 252  IFQLLTVLEGAIRPDCLSS-DFETSECLNSQVGSASVLPWVPDTTSAVMLRMLDLDSAIL 310

Query: 1131 PYLERVNSGKEDARMRCRGIFLFPQR 1156
             Y++     ++D      G   FP R
Sbjct: 311  -YVQNQKMDRDDG-----GFMKFPSR 330


>gi|147788788|emb|CAN60835.1| hypothetical protein VITISV_013893 [Vitis vinifera]
          Length = 407

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/80 (53%), Positives = 56/80 (70%), Gaps = 1/80 (1%)

Query: 484 VAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILL-EQGNNGSKVCQLARSS 542
             + FGS++G+ RKE+L KE+  M+KYGLR G LKGELF I L  QGN+G  +  L+R  
Sbjct: 5   TVSSFGSRKGTLRKEALDKELNSMVKYGLRLGILKGELFSIYLSNQGNDGMTIPDLSRCV 64

Query: 543 QIAELNLESTTEEVELLISS 562
            I++LNL  TTEE+EL I S
Sbjct: 65  HISKLNLADTTEELELPIFS 84


>gi|413950871|gb|AFW83520.1| hypothetical protein ZEAMMB73_217727 [Zea mays]
          Length = 577

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 52/291 (17%)

Query: 892  VREDSSSPVSDV-DNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWSRLQEFDAWIWN 950
            V   SS+P +D  D+  A S+  K          +++G+   E+  +  R   F  W+W 
Sbjct: 44   VGSSSSTPFNDTSDSVTAYSDSFK----------VELGRNDFEKAAISKRADIFLKWMWR 93

Query: 951  SFYLNLN--AVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDFDLEERYAVHA 1008
              Y      A+++GK+   + L  C  C+ +Y  +E+HC  CH TF+  ++  +    H 
Sbjct: 94   ECYNQEETCAMRYGKKRCSELLHSCNCCYQIYLAEERHCSSCHKTFKSIYNFSD----HT 149

Query: 1009 ATCRGK-----------GDHLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTKSAH 1057
              C  K            D+ V    +L      LK  +  IE+ +P +AL   WT    
Sbjct: 150  TQCEEKWRTDPYWKMQIADYSVPIGMVL------LKLQLVLIEAYIPSEALQPFWTDVYR 203

Query: 1058 KLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQWNVQIADTVMGEIIA----------- 1106
            K W  +L  T S+AE  Q++     AI    L       ++ +  ++IA           
Sbjct: 204  KSWSVKLYATKSIAETFQLLTVLEGAIIPDRLSSDFETTSECLNSQVIAPQNPVLPAGFA 263

Query: 1107 -FFPTMPQTSSALALWLVKLDAIIAPYLERVNSGKEDARMRCRGIFLFPQR 1156
               P +P T+SA+ L ++ LD+ I  Y++     ++D      G   FP R
Sbjct: 264  SVLPWVPDTTSAVMLRVLDLDSAIL-YVQNQKMERDDG-----GFMKFPSR 308


>gi|242032617|ref|XP_002463703.1| hypothetical protein SORBIDRAFT_01g004563 [Sorghum bicolor]
 gi|241917557|gb|EER90701.1| hypothetical protein SORBIDRAFT_01g004563 [Sorghum bicolor]
          Length = 121

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/91 (51%), Positives = 57/91 (62%)

Query: 412 DSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLN 471
           DS+LLG++HV LLKLLL   EM       P  S  C+FL+ L+ V  QEF    W +SLN
Sbjct: 31  DSLLLGEVHVGLLKLLLLKAEMGSDGVFVPRSSKDCRFLSFLNFVREQEFDANVWIRSLN 90

Query: 472 PLTWTEILRQVLVAAGFGSKQGSSRKESLSK 502
            LTW EILRQVLVA+GFG  Q    +E  +K
Sbjct: 91  ALTWVEILRQVLVASGFGPNQHLLNQEFFNK 121


>gi|164521888|gb|ABY60733.1| zygote-expressed homeodomain protein [Chlamydomonas reinhardtii]
          Length = 1767

 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 36/242 (14%)

Query: 374 PETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFH-DKDSMLLGKIHVALLKLLLSDVE 432
           P+   +L   + FL ++A +  +   +L++        +DS LLG +H ALL+LL +D+E
Sbjct: 603 PDLGTELLVCWSFLQSFADLFGVAVPSLEQLLGGLAAGEDSRLLGDVHCALLRLLQADME 662

Query: 433 ------MELGRGCP--PHL---SVSCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQ 481
                   +GR     PH    SV+      L       F V+ W   LN  TW E+LRQ
Sbjct: 663 DAHDEKERVGRPTANVPHFMDKSVAGSA-QRLEEAWAWGFDVDAWRAHLNTRTWPEVLRQ 721

Query: 482 VLVAAGFGSKQGSSRK--ESLSK--------------------EMILMLKYGLRPGTLKG 519
           V +  G G  + + R+  + L K                     + L +      GT+K 
Sbjct: 722 VAIVWGRGRARPAVRRPAQDLGKGPRIQGMDGEDVLDDGATGGSLKLRMPQRYTHGTVKA 781

Query: 520 ELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTY 579
             +++L   G NG  V  L R  Q   L    +++  E +++ +L+ D+ LF K+A +T+
Sbjct: 782 AAWQVLANVGPNGLSVGDLVRRIQKQGLREMRSSKTPEAVVAGSLARDV-LFTKVAPATW 840

Query: 580 RL 581
            L
Sbjct: 841 AL 842



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 2/83 (2%)

Query: 791  LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
            LGSDRR+NRYWLF    +  D G  R++ E + +G W ++ + EA   L++ L+ RG +E
Sbjct: 1217 LGSDRRHNRYWLFTS-GSPDDAGTARLWVELAPEGRWRLLTSPEAFDQLVAALEPRGLRE 1275

Query: 851  ALLIESLEKREAFLCQAMSSGLV 873
              L ++L  R A   +A   G+ 
Sbjct: 1276 GALAQAL-ARVADTVKAAMPGIA 1297


>gi|302854934|ref|XP_002958970.1| homeodomain protein [Volvox carteri f. nagariensis]
 gi|300255685|gb|EFJ39975.1| homeodomain protein [Volvox carteri f. nagariensis]
          Length = 1722

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 117/256 (45%), Gaps = 46/256 (17%)

Query: 365 FGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHD-KDSMLLGKIHVAL 423
           FGT P     +   +L   + FL ++A +  +   +L+   +A  + ++S LL  +H AL
Sbjct: 527 FGTGPDGLDDDIGSELLVCWSFLQSFADLFGVKVPSLEGLLEALAEGEESRLLADVHCAL 586

Query: 424 LKLLLSDVE------MELGRGCPPHLSVSCKFL--ALLHSVENQE------FFVEFWNKS 469
           L+L+ +D+E        +GR      + +  F+  +++ S    E      + V+ W   
Sbjct: 587 LRLIQADMEDAHDEKERVGR----QTAAAPNFMDRSVVGSARRLEEAWAWGYDVDCWRAH 642

Query: 470 LNPLTWTEILRQVLVAAGFGSKQGSSRKESL------------------------SKEMI 505
           LN LTW E+LRQV V AG G  +   R+ +                         S ++ 
Sbjct: 643 LNALTWPEVLRQVAVVAGRGRSRPPIRRSAADGTKGPRIQGIEGEDVVDDGSSGGSLKLR 702

Query: 506 LMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLS 565
           +  +Y L  GT+K   +++L   G +G  V +L R  Q   L    +++  E +++ +L+
Sbjct: 703 MPSRYVL--GTVKAAAWQVLASTGPSGLPVAELVRRIQRTGLREMRSSKTPEAVVAGSLA 760

Query: 566 SDITLFEKIASSTYRL 581
            D+ LF ++  +T+ L
Sbjct: 761 RDV-LFMRVQPATWAL 775



 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 791  LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
            LGSDRRYNRYWLF     E D G  R++ ES+ +G W ++ T + L  L++ L+ +G +E
Sbjct: 1168 LGSDRRYNRYWLFTT-GEEGDAGSGRLWVESAPEGTWRLLTTPQQLDELVASLEPKGVRE 1226

Query: 851  ALLIESL 857
              L ++L
Sbjct: 1227 GQLAQAL 1233


>gi|307111906|gb|EFN60140.1| hypothetical protein CHLNCDRAFT_56599 [Chlorella variabilis]
          Length = 1852

 Score = 67.0 bits (162), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 30/237 (12%)

Query: 375  ETVKKLFKVFHFLCTYAGIVDICSFTLDEF-AQAFHDKDSMLLGKIHVALLKLLLSDVEM 433
            E   KL   + FL  + G++ +   TL E  A       S LL  +H+ LL+L+ +D+E 
Sbjct: 788  EQGSKLLTSWSFLHGFGGMLGLPHCTLSELLAAVAKGSSSSLLASLHITLLRLVQADMEE 847

Query: 434  ELGRGCPPHLSVSC-----------KFLALLHSVENQ---EFFVEFWNKSLNPLTWTEIL 479
                    + + +            +F++  H +E      F V+ W   LN LTW E+ 
Sbjct: 848  AHAAQFGAYATTTAAMLAEQRGGDSRFMSAAHMLEEAWSWGFDVDGWRAHLNSLTWPEVA 907

Query: 480  RQVLVAAGFGSKQGSSRKESLSK--------------EMILMLKYGLRPGTLKGELFRIL 525
            RQ+ V AG G ++   +KE   K              ++ L L   L  GT+K   +++L
Sbjct: 908  RQLAVTAGLGRRRPKPKKEERPKMGQEGEDTVQDGSGDLKLRLPPRLGVGTVKAAAWQVL 967

Query: 526  LEQGNNGSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKIASSTYRLR 582
             E G  G +V  +AR  Q        +++  E  ++  +  D+ LF +  ++T+ L+
Sbjct: 968  AEAGPEGMRVEDIAREIQKRGFRDLRSSKTPEASVAGAMGRDV-LFVRTKAATFALQ 1023



 Score = 44.7 bits (104), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 33/53 (62%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
            ++KTP Q +AL   ++  +YPT+     L + + LT +QV TWF  +RR++K
Sbjct: 425 AQQKTPFQKEALEAAFALSQYPTEDMKRVLGSKIGLTAQQVGTWFTHRRRKEK 477


>gi|159490648|ref|XP_001703285.1| hypothetical protein CHLREDRAFT_143889 [Chlamydomonas reinhardtii]
 gi|158280209|gb|EDP05967.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 1280

 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 2/83 (2%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LGSDRR+NRYWLF    +  D G  R++ E + +G W ++ + EA   L++ L+ RG +E
Sbjct: 705 LGSDRRHNRYWLFTS-GSPDDAGTARLWVELAPEGRWRLLTSPEAFDQLVAALEPRGLRE 763

Query: 851 ALLIESLEKREAFLCQAMSSGLV 873
             L ++L  R A   +A   G+ 
Sbjct: 764 GALAQAL-ARVADTVKAAMPGIA 785


>gi|242053941|ref|XP_002456116.1| hypothetical protein SORBIDRAFT_03g030782 [Sorghum bicolor]
 gi|241928091|gb|EES01236.1| hypothetical protein SORBIDRAFT_03g030782 [Sorghum bicolor]
          Length = 247

 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 40/188 (21%)

Query: 3   VKR--KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK----- 55
           VKR  KTP Q + L K Y+ E+YP+++    L+A + L+ +Q++ WF  +R +D+     
Sbjct: 56  VKRMMKTPYQLEVLEKTYAAEQYPSEAMRLELSAKIGLSDRQLQMWFCHRRLKDRKPPAK 115

Query: 56  -------------------------------GDNGIVIPSSSSKKLKGFHGRNRLGVVSA 84
                                           D+ +  P    + L   H R   G  SA
Sbjct: 116 RQRREEESALAPVMPPPPVLPAPVSVMPLASSDHMVGAPGPYDEPLHPVHSRRGAGRSSA 175

Query: 85  --KIVKKQDSLIHNKHLSLMVCNGTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEF 142
             +I        + +   +M+       +   + L+ + + +  L +  R+DGP LG+EF
Sbjct: 176 VPRISMPDIGRRYYEPTPIMIAPAIPSMQLTQSELRVINSVESELGEPLREDGPALGIEF 235

Query: 143 DSLPSQAF 150
           D LP  AF
Sbjct: 236 DPLPPGAF 243


>gi|253761271|ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 [Sorghum bicolor]
 gi|241947124|gb|EES20269.1| hypothetical protein SORBIDRAFT_0139s002040 [Sorghum bicolor]
          Length = 1822

 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 783 LHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEA 835
           L+  +S+ LG DRR NRYW F    +  D G  R++FE S+DG W VID+EEA
Sbjct: 237 LYVYRSLPLGQDRRRNRYWQFTTSASPNDLGSGRIFFE-SKDGCWRVIDSEEA 288



 Score = 53.9 bits (128), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 36/46 (78%)

Query: 648 EIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSIR 693
           +IDES++ + W+  L EG+Y DL+++E+LNALV L+ + + G+SIR
Sbjct: 65  QIDESNQVEPWVRALAEGDYYDLSVEERLNALVALVGVATEGNSIR 110


>gi|296083843|emb|CBI24231.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 6  KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          KTP Q +AL KFY+E KYPT+S    LA  + LT KQ+  WF  +R +DK
Sbjct: 25 KTPSQVQALEKFYNEHKYPTESMKSELAEEIGLTEKQISGWFCHRRLKDK 74


>gi|359479221|ref|XP_002279963.2| PREDICTED: uncharacterized protein LOC100265339 [Vitis vinifera]
          Length = 528

 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 6  KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          KTP Q +AL KFY+E KYPT+S    LA  + LT KQ+  WF  +R +DK
Sbjct: 25 KTPSQVQALEKFYNEHKYPTESMKSELAEEIGLTEKQISGWFCHRRLKDK 74


>gi|147810395|emb|CAN59966.1| hypothetical protein VITISV_022759 [Vitis vinifera]
          Length = 245

 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 6  KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          KTP Q +AL KFY+E KYPT+S    LA  + LT KQ+  WF  +R +DK
Sbjct: 30 KTPSQVQALEKFYNEHKYPTESMKSELAEEIGLTEKQISGWFCHRRLKDK 79


>gi|357493979|ref|XP_003617278.1| hypothetical protein MTR_5g089870 [Medicago truncatula]
 gi|355518613|gb|AET00237.1| hypothetical protein MTR_5g089870 [Medicago truncatula]
          Length = 544

 Score = 53.9 bits (128), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 33/52 (63%)

Query: 4  KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          K KTP Q K L KFY+E KYPT+     +A  L+LT KQV  WF  +R +DK
Sbjct: 23 KLKTPAQLKGLEKFYTEHKYPTEELKLAIAEELELTEKQVSGWFCHRRLKDK 74


>gi|334186341|ref|NP_192234.2| homeobox-leucine zipper family protein [Arabidopsis thaliana]
 gi|332656897|gb|AEE82297.1| homeobox-leucine zipper family protein [Arabidopsis thaliana]
          Length = 507

 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 2/53 (3%)

Query: 4  KRKTPLQAKALLKFYSEEKYPTKSEMEG-LAAALDLTYKQVRTWFIEKRRRDK 55
          K KTP+Q  AL  FY+E KYPT+ EM+G LA  + LT KQV  WF  +R +DK
Sbjct: 24 KLKTPMQVMALENFYNEHKYPTE-EMKGKLAEEVGLTEKQVSGWFCHRRLKDK 75


>gi|356524168|ref|XP_003530704.1| PREDICTED: uncharacterized protein LOC100811885 [Glycine max]
          Length = 400

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 32/50 (64%)

Query: 6  KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          KTP Q KAL  FY++ KYPT+     LA  L+LT KQ+  WF  +R +DK
Sbjct: 25 KTPAQLKALEDFYNDNKYPTEEMKSELADELELTEKQISGWFCHRRLKDK 74


>gi|356554131|ref|XP_003545402.1| PREDICTED: uncharacterized protein LOC100803515 [Glycine max]
          Length = 527

 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 32/52 (61%)

Query: 4  KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          K KTP Q KAL  FY+E KYPT+     LA  L LT KQ+  WF  +R +DK
Sbjct: 23 KLKTPAQLKALENFYNEHKYPTEEMKLVLAEELGLTEKQISGWFCHRRLKDK 74


>gi|356501401|ref|XP_003519513.1| PREDICTED: uncharacterized protein LOC100805913 [Glycine max]
          Length = 526

 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 32/52 (61%)

Query: 4  KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          K KTP Q KAL  FY+E KYPT+     LA  L LT KQ+  WF  +R +DK
Sbjct: 23 KLKTPAQLKALEDFYNEHKYPTEEMKLVLAEELGLTEKQISGWFCHRRLKDK 74


>gi|356569985|ref|XP_003553173.1| PREDICTED: uncharacterized protein LOC100812697 [Glycine max]
          Length = 381

 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 31/50 (62%)

Query: 6  KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          KTP Q K L  FY++ KYPT+     LA  L+LT KQ+  WF  +R +DK
Sbjct: 25 KTPAQLKGLEDFYNDNKYPTEEMKSELADELELTEKQISGWFCHRRLKDK 74


>gi|224105959|ref|XP_002313994.1| predicted protein [Populus trichocarpa]
 gi|222850402|gb|EEE87949.1| predicted protein [Populus trichocarpa]
          Length = 471

 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 31/50 (62%)

Query: 6  KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          KTP Q  AL  FY+E KYPT+     LA  + LT KQ+ +WF  +R +DK
Sbjct: 25 KTPAQVVALENFYNEHKYPTEEMKSELADQIGLTEKQISSWFCHRRLKDK 74


>gi|449444877|ref|XP_004140200.1| PREDICTED: uncharacterized protein LOC101207235 [Cucumis sativus]
 gi|449480977|ref|XP_004156045.1| PREDICTED: uncharacterized LOC101207235 [Cucumis sativus]
          Length = 506

 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 32/52 (61%)

Query: 4  KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          K KTP Q  AL KFY+E KYPT+     L+  L LT KQ+  WF  +R +DK
Sbjct: 25 KLKTPSQLVALEKFYNEHKYPTEEMKSQLSEELGLTEKQISGWFCHRRLKDK 76


>gi|307950967|gb|ADN97183.1| A2 mating-type protein [Phanerochaete chrysosporium]
          Length = 489

 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 2   EVKRKTPLQ---AKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           E  R+ P +     AL +F++E+ YPT++E E LAAA  + Y+Q+  W   +R R K D 
Sbjct: 155 ESSRRQPFRQEAVPALERFFAEKPYPTRTEKEQLAAATHMDYRQIHVWLQNRRNRLKRDG 214


>gi|356512894|ref|XP_003525149.1| PREDICTED: DDT domain-containing protein DDB_G0282237-like [Glycine
           max]
          Length = 678

 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 8/78 (10%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG DR YN YW F   C      + R++ ES +   W    ++E L AL+S L+ +G +E
Sbjct: 563 LGKDRDYNNYWWF---CR-----YGRIFVESCDSKKWGYYSSKEELDALMSSLNCKGERE 614

Query: 851 ALLIESLEKREAFLCQAM 868
            +L + LEK  + +C  +
Sbjct: 615 RVLRKQLEKYYSTICSEL 632


>gi|294462655|gb|ADE76873.1| unknown [Picea sitchensis]
          Length = 371

 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 2/57 (3%)

Query: 1  MEVKR--KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          +E KR  KTP Q +AL   Y+E KYPT+S    L+  L L+ KQV+ WF  +R +DK
Sbjct: 16 VEQKRRLKTPSQVEALENIYAEHKYPTESMKGKLSRELGLSEKQVQRWFRHRRLKDK 72


>gi|357520229|ref|XP_003630403.1| Nucleosome/chromatin assembly factor group [Medicago truncatula]
 gi|355524425|gb|AET04879.1| Nucleosome/chromatin assembly factor group [Medicago truncatula]
          Length = 460

 Score = 48.1 bits (113), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 31/206 (15%)

Query: 677 NALVGLIDLVSAGSSIRMEDPT-KAIAESVPSVRHYGSGAK--IKRALPNQHSLPRPSWV 733
           N L G  D++S  + I+      K I   + S R   S  K  +KR+ P     P+    
Sbjct: 243 NHLNG-ADILSNNNHIKQNGHVGKKINGEIESSRQDNSLGKSGVKRSSPASKKTPK---- 297

Query: 734 HAGDFHGVRETNTSREL-HPLDSFSLISKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLG 792
                      N   EL  P ++   +S+    EK+S  +  +  E   +  P+    LG
Sbjct: 298 -----------NLDTELKEPAENGKELSRKDPSEKNSIEQRREYFEREMEKRPISRSPLG 346

Query: 793 SDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEAL 852
            DR YNRYW F            R++ ES +   W    ++E L AL+  L+ +G +E  
Sbjct: 347 KDRDYNRYWWFR--------RDGRIFVESCDSKEWGYYSSKEELDALIGSLNCKGERERA 398

Query: 853 LIESLEKREAFLC---QAMSSGLVNN 875
           L + LE     +C   Q  S  L+ N
Sbjct: 399 LQKQLEINYRSICTELQKRSKELLQN 424


>gi|356516421|ref|XP_003526893.1| PREDICTED: uncharacterized protein LOC100784607 [Glycine max]
          Length = 621

 Score = 48.1 bits (113), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 20/100 (20%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHK--RVYFESSEDGHWEVIDTEEALRALLSVLDDRGR 848
           LG DR YNRYW F          H+  R++ ESS+   W    ++E L AL+S L+ +G 
Sbjct: 506 LGKDRYYNRYWWF----------HRDGRIFVESSDSKEWGFYSSKEELDALMSSLNCKGE 555

Query: 849 QEALLIESLEKREAFLC---QAMSSGLVNNTEIRHVAQSD 885
           +E  L + LE     +C   Q  S  LV+      VAQ D
Sbjct: 556 RERALHKQLEIYYNRICSELQKSSKDLVHK-----VAQDD 590


>gi|449485127|ref|XP_002190732.2| PREDICTED: homeobox protein NANOG [Taeniopygia guttata]
          Length = 327

 Score = 47.8 bits (112), Expect = 0.038,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 8/64 (12%)

Query: 10  QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKG--------DNGIV 61
           Q KAL + +  +KY +  ++  LAAAL+LTYKQV+TWF  +R + K         D G+ 
Sbjct: 125 QLKALHQRFQSQKYLSPQQIRELAAALELTYKQVKTWFQNQRMKFKRCQKESQWMDKGMY 184

Query: 62  IPSS 65
           +P +
Sbjct: 185 LPQN 188


>gi|359480782|ref|XP_002272046.2| PREDICTED: DDT domain-containing protein DDB_G0282237 [Vitis
           vinifera]
          Length = 621

 Score = 47.4 bits (111), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 17/134 (12%)

Query: 733 VHAGDFHGVRETNTSRELHPLDSFSLISKSCGKEKSSSVK-DAKATEVSTDLHPMQSIYL 791
           V   + HG+   NTS +         +  S GK+ S   K D +  +   D   +++  L
Sbjct: 455 VQEANGHGLENNNTSDDA--------LGNSDGKKSSKKQKVDREYLQREIDKRFIRTEPL 506

Query: 792 GSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQEA 851
           G D+ YNRYW F            R++ ES +   W    T+E L A    L+ +G +E 
Sbjct: 507 GKDKDYNRYWFFRR--------DGRIFVESWDSKQWGYYSTKEELDAFKGSLNRKGVRER 558

Query: 852 LLIESLEKREAFLC 865
            L   LEK    +C
Sbjct: 559 ALQSQLEKSNNKIC 572


>gi|2707270|gb|AAB92246.1| homeobox-containing protein [Dictyostelium discoideum]
          Length = 534

 Score = 47.4 bits (111), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 12/107 (11%)

Query: 2   EVKRKTPL---QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           E KR+T L   QA  L  F+  + YPTK + E LA  L ++Y  V TWF  K R++K   
Sbjct: 77  EKKRRTRLKKEQADILKTFFDNDDYPTKDDKETLANRLGMSYCAVTTWFSNK-RQEKKRR 135

Query: 59  GIVIPSSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCN 105
           G V P  +        G     +++  I+K +  +IH++ + +   N
Sbjct: 136 GDVAPVQT--------GEEEFLLMTKMIMKIEMVIIHHQEIKVEPLN 174


>gi|281201499|gb|EFA75708.1| hypothetical protein PPL_10761 [Polysphondylium pallidum PN500]
          Length = 785

 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 2   EVKRKTPL---QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           E KR+T L   Q+  L  F+ ++ YP K E E LA+ L + Y  V TWF  KR+  +
Sbjct: 362 EKKRRTRLKKEQSSTLKSFFEKDNYPNKEEKEKLASMLGMNYTAVTTWFSNKRQEKR 418


>gi|357163659|ref|XP_003579804.1| PREDICTED: DDT domain-containing protein DDB_G0282237-like
           [Brachypodium distachyon]
          Length = 641

 Score = 47.0 bits (110), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 92/240 (38%), Gaps = 24/240 (10%)

Query: 646 YMEIDESHRGDVWLSGLMEGEYSDLTIDEKLNALVGLIDLVSAGSSI------RMEDPTK 699
           +ME+         +S +  G Y  +    KL  L  L+D   A S++      R++    
Sbjct: 369 FMEMTSKKDFSSNISTVRRGHYGLVHTGRKLQILRELVDEAIATSAVKEKLEERIDQQQA 428

Query: 700 AIAESVPSVRHYGSGAKIKRALPNQHSLPRPSWVHAGDFHGVRETNTSRELHPLDSFSLI 759
            +AE    +R      K+      ++ +           H  +  N S    P+      
Sbjct: 429 LVAEKREVIRKNKEEQKLNMEGVTKNEM--------NQTHAAQNGNESANGQPVGKEGKE 480

Query: 760 SKSCGKEKSSSVKDAKATEVSTDL--HPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRV 817
            K     K+   K      + T++    +++  LG DR YNRYW F            R+
Sbjct: 481 RKIASASKTGDGKLYLRRHLETEMVDQSIRTSPLGKDRLYNRYWFF--------RREGRL 532

Query: 818 YFESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTE 877
           + E+++   W    T+E L AL+  L+ +G +E  L   LEK    +  A+   L + T+
Sbjct: 533 FVENADSEEWGYYSTKEELDALIGSLNIKGIRERALKRQLEKFYDKISNALEKRLKDVTQ 592


>gi|307110662|gb|EFN58898.1| expressed protein [Chlorella variabilis]
          Length = 1199

 Score = 47.0 bits (110), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 7/78 (8%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG+DR + RYW  L        GH+   +    +G W  + +   L AL+  LD RG +E
Sbjct: 804 LGADRHHRRYWWGLA-------GHRPAVYVEDGEGRWGSVSSLAELDALVGSLDRRGIRE 856

Query: 851 ALLIESLEKREAFLCQAM 868
             L E++EKR   +  AM
Sbjct: 857 MALAEAIEKRFQTISVAM 874


>gi|328873080|gb|EGG21447.1| homeobox transcription factor [Dictyostelium fasciculatum]
          Length = 402

 Score = 47.0 bits (110), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 8/70 (11%)

Query: 2   EVKRKTPL---QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK--- 55
           E KR+T L   Q+  L  F++ + YP K E E LA  L +TY  V TWF  KR+ ++   
Sbjct: 122 EKKRRTRLKKEQSTVLKSFFNRDCYPNKEEKESLANQLGMTYTAVTTWFSNKRQENRRKS 181

Query: 56  --GDNGIVIP 63
             G  G  +P
Sbjct: 182 TDGTGGRRVP 191


>gi|242065398|ref|XP_002453988.1| hypothetical protein SORBIDRAFT_04g022750 [Sorghum bicolor]
 gi|241933819|gb|EES06964.1| hypothetical protein SORBIDRAFT_04g022750 [Sorghum bicolor]
          Length = 586

 Score = 47.0 bits (110), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 778 EVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALR 837
           +   D   ++S  LG DR+YNRYW F   C        R++ E+++   W    T+E L 
Sbjct: 458 DTEIDKLSIRSSPLGKDRQYNRYWFF--KC------EGRLFVETADSREWGYYSTKEELD 509

Query: 838 ALLSVLDDRGRQEALLIESLEK 859
           AL+  L+ +G +E  L   LEK
Sbjct: 510 ALMGSLNVKGIRERALKRQLEK 531


>gi|116309804|emb|CAH66843.1| H0525C06.6 [Oryza sativa Indica Group]
 gi|218194903|gb|EEC77330.1| hypothetical protein OsI_16003 [Oryza sativa Indica Group]
          Length = 618

 Score = 46.6 bits (109), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 8/74 (10%)

Query: 786 MQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDD 845
           +QS  LG DR YNRYW F            R++ ES++   W    T+E L AL+  L+ 
Sbjct: 498 VQSNSLGKDRYYNRYWFF--------RHEGRLFVESADSKEWGYYSTKEELDALIGSLNV 549

Query: 846 RGRQEALLIESLEK 859
           +G +E  L   L+K
Sbjct: 550 KGIRERALKRQLDK 563


>gi|147775536|emb|CAN73827.1| hypothetical protein VITISV_003176 [Vitis vinifera]
          Length = 533

 Score = 46.6 bits (109), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 32/185 (17%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKR---------RRD 54
           K KT  Q + L K Y+ E YP+++    L+A L L+ +Q++ WF  +R         +R 
Sbjct: 224 KMKTASQLEILEKTYAVETYPSETLRAELSAKLGLSDRQLQMWFCHRRLKDRKTPPVKRP 283

Query: 55  KGDNGIVIPSSSSKKLKGFHGRNRLGVV-------------------SAKIVKKQDSLIH 95
           + D+ + + SS++    G   R  + V                    S ++V +  + + 
Sbjct: 284 RKDSPVKVTSSAA----GTPVREEMEVGNEHPSGSGSGSSPFGHVLESRRVVPRPGTAVA 339

Query: 96  NKHLSLMVCNGTGKKKNAVTVLQDLLTSDYILKKVFRKDGPPLGVEFDSLPSQAFFRSKD 155
                +       +    ++ L+ +   +  L +  R+DGP LG+EFD LP  AF     
Sbjct: 340 RIGADMPPMKRYYEPPQXISELRAIAFVEAQLGEPLREDGPILGMEFDPLPPDAFGAPIG 399

Query: 156 SINSC 160
             + C
Sbjct: 400 KFDFC 404


>gi|66820224|ref|XP_643746.1| hypothetical protein DDB_G0275173 [Dictyostelium discoideum AX4]
 gi|75013535|sp|Q869W0.1|HBX2_DICDI RecName: Full=Homeobox protein 2; Short=DdHbx-2
 gi|60471913|gb|EAL69867.1| hypothetical protein DDB_G0275173 [Dictyostelium discoideum AX4]
          Length = 942

 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 4/65 (6%)

Query: 2   EVKRKTPL---QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           E KR+T L   QA  L  F+  + YPTK + E LA  L ++Y  V TWF  K R++K   
Sbjct: 485 EKKRRTRLKKEQADILKTFFDNDDYPTKDDKETLANRLGMSYCAVTTWFSNK-RQEKKRR 543

Query: 59  GIVIP 63
           G V P
Sbjct: 544 GDVAP 548


>gi|356527556|ref|XP_003532375.1| PREDICTED: DDT domain-containing protein DDB_G0282237-like [Glycine
           max]
          Length = 683

 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 8/78 (10%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG DR +NRYW F   C      + R++ ES +  +W    ++E L  L+S L+ +G +E
Sbjct: 568 LGKDRDHNRYWWF---CR-----YGRIFVESCDSKNWGYYSSKEELDTLMSSLNCKGERE 619

Query: 851 ALLIESLEKREAFLCQAM 868
             L + LEK    +C  +
Sbjct: 620 RALQKHLEKYYNTICSEL 637


>gi|222628920|gb|EEE61052.1| hypothetical protein OsJ_14909 [Oryza sativa Japonica Group]
          Length = 126

 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 8/76 (10%)

Query: 784 HPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVL 843
             +QS  LG DR YNRYW F            R++ ES++   W    T+E L AL+  L
Sbjct: 4   QSVQSNSLGKDRYYNRYWFFRHEG--------RLFVESADSKEWGYYSTKEELDALIGSL 55

Query: 844 DDRGRQEALLIESLEK 859
           + +G +E  L   L+K
Sbjct: 56  NVKGIRERALKRQLDK 71


>gi|330790879|ref|XP_003283523.1| hypothetical protein DICPUDRAFT_96404 [Dictyostelium purpureum]
 gi|325086633|gb|EGC40020.1| hypothetical protein DICPUDRAFT_96404 [Dictyostelium purpureum]
          Length = 597

 Score = 45.8 bits (107), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 3/57 (5%)

Query: 2   EVKRKTPL---QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           E KR+T L   QA+ L  F+  + YPTK + E LA  L ++Y  V TWF  KR+  K
Sbjct: 306 EKKRRTRLKKEQAEILKSFFENDDYPTKEDKEKLAQRLGMSYCAVTTWFSNKRQEKK 362


>gi|341888339|gb|EGT44274.1| hypothetical protein CAEBREN_14128 [Caenorhabditis brenneri]
          Length = 2469

 Score = 45.8 bits (107), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 36/140 (25%)

Query: 369 PWDSSPETVKKL-------------------FKVFHFLCTYAGIVDICSFTLDEFAQAFH 409
           PW  +PET+ KL                    +++  L +Y   + I  FT ++F  A  
Sbjct: 180 PWIENPETLPKLDLPETSQDIPIPISSTMDAIEIYEILRSYHRTLRITPFTFEDFCAALI 239

Query: 410 DKD-SMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNK 468
            K+ S ++ ++H+ALL++ L   + EL +                +SV      V     
Sbjct: 240 SKNNSCIMAEVHMALLRVCLKSDDEELTQ----------------YSVTETNNSVNIMIH 283

Query: 469 SLNPLTWTEILRQVLVAAGF 488
            ++ LT+ EILRQ + A  F
Sbjct: 284 HMDTLTYAEILRQYIEAYPF 303


>gi|115446709|ref|NP_001047134.1| Os02g0556900 [Oryza sativa Japonica Group]
 gi|46389867|dbj|BAD15468.1| putative DDT domain-containing protein [Oryza sativa Japonica
           Group]
 gi|113536665|dbj|BAF09048.1| Os02g0556900 [Oryza sativa Japonica Group]
 gi|215695207|dbj|BAG90398.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 617

 Score = 45.8 bits (107), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 11/95 (11%)

Query: 786 MQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDD 845
           ++S  LG DR YNRYW F            R++ ES++   W    T+E L  L+S L+ 
Sbjct: 497 IRSSPLGKDRHYNRYWFF--------RREGRLFVESADSKEWGYYSTKEELDVLMSSLNV 548

Query: 846 RGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRH 880
           +G +E  L   L+K  + +  A+      + EI H
Sbjct: 549 KGLRERALKRQLDKLYSKISNALEK---RSKEITH 580


>gi|222623061|gb|EEE57193.1| hypothetical protein OsJ_07138 [Oryza sativa Japonica Group]
          Length = 720

 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 8/83 (9%)

Query: 786 MQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDD 845
           ++S  LG DR YNRYW F            R++ ES++   W    T+E L  L+S L+ 
Sbjct: 600 IRSSPLGKDRHYNRYWFF--------RREGRLFVESADSKEWGYYSTKEELDVLMSSLNV 651

Query: 846 RGRQEALLIESLEKREAFLCQAM 868
           +G +E  L   L+K  + +  A+
Sbjct: 652 KGLRERALKRQLDKLYSKISNAL 674


>gi|326912641|ref|XP_003202657.1| PREDICTED: homeobox protein NANOG-like [Meleagris gallopavo]
          Length = 309

 Score = 45.4 bits (106), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 14/73 (19%)

Query: 10  QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKG--------DNGIV 61
           Q + L + +  +KY +  ++  LAAAL LTYKQV+TWF  +R + K         D GI 
Sbjct: 109 QLQTLHQRFQSQKYLSPHQIRELAAALGLTYKQVKTWFQNQRMKFKRCQKESQWVDKGIY 168

Query: 62  IPSSSSKKLKGFH 74
           +P +      GFH
Sbjct: 169 LPQN------GFH 175


>gi|225784819|ref|NP_001139614.1| nanog homeobox [Gallus gallus]
 gi|116804642|gb|ABK27429.1| nanog [Gallus gallus]
          Length = 309

 Score = 45.4 bits (106), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 14/73 (19%)

Query: 10  QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKG--------DNGIV 61
           Q + L + +  +KY +  ++  LAAAL LTYKQV+TWF  +R + K         D GI 
Sbjct: 109 QLQTLHQRFQSQKYLSPHQIRELAAALGLTYKQVKTWFQNQRMKFKRCQKESQWVDKGIY 168

Query: 62  IPSSSSKKLKGFH 74
           +P +      GFH
Sbjct: 169 LPQN------GFH 175


>gi|413922685|gb|AFW62617.1| hypothetical protein ZEAMMB73_485594 [Zea mays]
          Length = 620

 Score = 45.4 bits (106), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 19/111 (17%)

Query: 777 TEVSTDLH--------PMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWE 828
           TEV   +H         ++S  LG DR+Y+RYW F            R++ E+++   W 
Sbjct: 483 TEVKRHMHLETEIEKLSIRSSPLGKDRQYSRYWFF--------KREGRLFVETADSREWG 534

Query: 829 VIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAM---SSGLVNNT 876
              T+E L AL+  L+ +G +E  L   LEK  + +  A+   S  + N T
Sbjct: 535 YYSTKEELDALMDSLNVKGIRERALKRQLEKFYSKISNALEKRSKDIANKT 585


>gi|218190975|gb|EEC73402.1| hypothetical protein OsI_07656 [Oryza sativa Indica Group]
          Length = 643

 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 11/95 (11%)

Query: 786 MQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDD 845
           ++S  LG DR YNRYW F            R++ ES++   W    T+E L  L+S L+ 
Sbjct: 523 IRSSPLGKDRHYNRYWFF--------RREGRLFVESADTKEWGYYSTKEELDVLMSSLNV 574

Query: 846 RGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRH 880
           +G +E  L   L+K  + +  A+      + EI H
Sbjct: 575 KGIRERALKRQLDKLYSKISNALEK---RSKEITH 606


>gi|326533320|dbj|BAJ93632.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 560

 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 8/69 (11%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG DR YNRYW F            R++ E+++   W    T+E L AL+  L+ +G +E
Sbjct: 433 LGKDRFYNRYWFF--------RREGRLFVENADSKEWGYYSTKEELDALIGSLNIKGIRE 484

Query: 851 ALLIESLEK 859
             L E L+K
Sbjct: 485 RALKEQLDK 493


>gi|148357118|ref|NP_001091862.1| nanog homeobox [Danio rerio]
 gi|146552045|gb|ABQ42198.1| ovary-expressed homeobox protein [Danio rerio]
 gi|190336875|gb|AAI62315.1| Zgc:193933 [Danio rerio]
 gi|190339410|gb|AAI62318.1| Zgc:193933 [Danio rerio]
 gi|354551458|gb|AER28355.1| nanog protein [Danio rerio]
 gi|374706711|gb|AEZ64150.1| Nanog [Danio rerio]
          Length = 384

 Score = 45.1 bits (105), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 31/46 (67%)

Query: 10  QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           Q  AL+  ++ ++Y T +EM+ LA A  LTYKQV+TWF  +R + K
Sbjct: 206 QMNALVNRFNVQRYLTPAEMKTLAGATGLTYKQVKTWFQNRRMKLK 251


>gi|426385227|ref|XP_004059126.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Gorilla
           gorilla gorilla]
          Length = 290

 Score = 45.1 bits (105), Expect = 0.26,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 177 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 235


>gi|297810981|ref|XP_002873374.1| DDT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319211|gb|EFH49633.1| DDT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
          Length = 722

 Score = 45.1 bits (105), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG DR YNRYW F          + R++ E S+   W    ++E L AL+  L+ +G +E
Sbjct: 607 LGKDRDYNRYWWFR--------SNGRIFVEDSDSKEWGYYTSKEELDALMGSLNRKGERE 658

Query: 851 ALLIESLEKREAFLC---QAMSSGLVNNTEI 878
             L   LE     +C   Q  +  + +N E+
Sbjct: 659 LSLHTQLETFYDRICSTLQKRTKDIAHNIEM 689


>gi|345320236|ref|XP_001516194.2| PREDICTED: homeobox protein NANOG-like [Ornithorhynchus anatinus]
          Length = 323

 Score = 45.1 bits (105), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 3/55 (5%)

Query: 7   TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKR---RRDKGDN 58
           T  Q   L + +  +KY +  ++  LA +L+LTYKQV+TWF  +R   +RD+ DN
Sbjct: 130 TQTQLNTLNRRFQTQKYLSPQQIRDLAMSLNLTYKQVKTWFQNQRMKSKRDRKDN 184


>gi|317419780|emb|CBN81816.1| Homeodomain transcription factor Nanog [Dicentrarchus labrax]
          Length = 436

 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 3/55 (5%)

Query: 10  QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKR---RRDKGDNGIV 61
           Q  AL++ +S ++Y T +EM+ LA    LTYKQ++TWF  +R   RR + D   V
Sbjct: 232 QMNALVQRFSVQRYLTPAEMKNLAEMTGLTYKQIKTWFQNRRMKLRRHQKDTSWV 286


>gi|345796334|ref|XP_535801.3| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-4 [Canis lupus familiaris]
          Length = 373

 Score = 44.7 bits (104), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 152 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 210


>gi|212275504|ref|NP_001130568.1| uncharacterized protein LOC100191667 [Zea mays]
 gi|194689504|gb|ACF78836.1| unknown [Zea mays]
 gi|238011510|gb|ACR36790.1| unknown [Zea mays]
 gi|413922686|gb|AFW62618.1| hypothetical protein ZEAMMB73_485594 [Zea mays]
 gi|413922687|gb|AFW62619.1| hypothetical protein ZEAMMB73_485594 [Zea mays]
 gi|413922688|gb|AFW62620.1| hypothetical protein ZEAMMB73_485594 [Zea mays]
          Length = 622

 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 11/94 (11%)

Query: 786 MQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDD 845
           ++S  LG DR+Y+RYW F            R++ E+++   W    T+E L AL+  L+ 
Sbjct: 502 IRSSPLGKDRQYSRYWFF--------KREGRLFVETADSREWGYYSTKEELDALMDSLNV 553

Query: 846 RGRQEALLIESLEKREAFLCQAM---SSGLVNNT 876
           +G +E  L   LEK  + +  A+   S  + N T
Sbjct: 554 KGIRERALKRQLEKFYSKISNALEKRSKDIANKT 587


>gi|341895284|gb|EGT51219.1| CBN-NURF-1 protein, partial [Caenorhabditis brenneri]
          Length = 1026

 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 36/140 (25%)

Query: 369 PWDSSPETVKKL-------------------FKVFHFLCTYAGIVDICSFTLDEFAQAFH 409
           PW  +PET+ KL                    +++  L +Y   + I  FT ++F  A  
Sbjct: 179 PWIENPETLPKLDLPETSQDIPIPISSTMDAIEIYEILRSYHRTLRITPFTFEDFCAALI 238

Query: 410 DKD-SMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNK 468
            K+ S ++ ++H+ALL++ L   + EL +                +SV      V     
Sbjct: 239 SKNNSCIMAEVHMALLRVCLKSDDEELTQ----------------YSVTETNNSVNIMIH 282

Query: 469 SLNPLTWTEILRQVLVAAGF 488
            ++ LT+ EILRQ + A  F
Sbjct: 283 HMDTLTYAEILRQYIEAYPF 302


>gi|30682510|ref|NP_196480.2| DDT domain-containing protein [Arabidopsis thaliana]
 gi|332003948|gb|AED91331.1| DDT domain-containing protein [Arabidopsis thaliana]
          Length = 723

 Score = 44.7 bits (104), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG DR YNRYW F          + R++ E+S+   W     +E L AL+  L+ +G +E
Sbjct: 608 LGKDRDYNRYWWFR--------SNGRIFVENSDSEEWGYYTAKEELDALMGSLNRKGERE 659

Query: 851 ALLIESLEKREAFLC---QAMSSGLVNNTEI 878
             L   LE     +C   Q  +  + +N E+
Sbjct: 660 LSLYTQLEIFYDRICSTLQKRTKDIAHNIEM 690


>gi|443694028|gb|ELT95263.1| hypothetical protein CAPTEDRAFT_213976 [Capitella teleta]
          Length = 279

 Score = 44.7 bits (104), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 7/100 (7%)

Query: 4   KRKTPLQAKALL-KFYSEE---KYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGD-- 57
           KR  P +A  L+ K+Y E     YP K +M+  A+A  +T  QV+ W   KR R      
Sbjct: 165 KRSLPAEAVVLMSKWYQENFHYPYPDKEDMQHFASAGGITVGQVKKWMANKRVRSLNTLS 224

Query: 58  -NGIVIPSSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHN 96
            NG V P     KL+    ++    +     K Q  L+HN
Sbjct: 225 YNGSVHPKRKHNKLRSAAAKSNEDQLQRSREKSQTYLVHN 264


>gi|9759357|dbj|BAB10012.1| unnamed protein product [Arabidopsis thaliana]
          Length = 723

 Score = 44.7 bits (104), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 11/91 (12%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG DR YNRYW F          + R++ E+S+   W     +E L AL+  L+ +G +E
Sbjct: 608 LGKDRDYNRYWWF--------RSNGRIFVENSDSEEWGYYTAKEELDALMGSLNRKGERE 659

Query: 851 ALLIESLEKREAFLC---QAMSSGLVNNTEI 878
             L   LE     +C   Q  +  + +N E+
Sbjct: 660 LSLYTQLEIFYDRICSTLQKRTKDIAHNIEM 690


>gi|115439095|ref|NP_001043827.1| Os01g0672300 [Oryza sativa Japonica Group]
 gi|56201851|dbj|BAD73301.1| homeobox transcription factor-like [Oryza sativa Japonica Group]
 gi|113533358|dbj|BAF05741.1| Os01g0672300 [Oryza sativa Japonica Group]
 gi|323388843|gb|ADX60226.1| DDT transcription factor [Oryza sativa Japonica Group]
          Length = 417

 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 21/142 (14%)

Query: 1032 LKAAVHAIESVMPEDALVGAWTKSAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQ 1091
            LK  +  IE+ +P +A+   WT    K W  +L  T+SL E+ Q++    +AI    L  
Sbjct: 15   LKLQLSTIEASIPPEAIQPFWTDGYRKSWGVKLHSTTSLEEIFQMLTLLEAAIKRDHLSS 74

Query: 1092 --------WNVQIADTV------MGEIIAFFPTMPQTSSALALWLVKLDAIIAPYLERVN 1137
                     N+   D        +    A  P +P T++A+AL ++ LD+ ++ Y++  N
Sbjct: 75   EFETTSELLNLNTQDNPSQNHVGLSGSAAVLPWVPDTTAAIALRMLDLDSAVS-YMQ--N 131

Query: 1138 SGKEDARMRCRGIFLFPQRPFI 1159
               E    R  G F+ P   F+
Sbjct: 132  QKME----RNGGDFMKPPSRFV 149


>gi|339243205|ref|XP_003377528.1| putative homeobox domain protein [Trichinella spiralis]
 gi|316973663|gb|EFV57227.1| putative homeobox domain protein [Trichinella spiralis]
          Length = 1019

 Score = 44.3 bits (103), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 30/46 (65%)

Query: 7   TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRR 52
           TP Q   L +F+  EKYP+  + + LA  L+L+ ++V+ WF E+RR
Sbjct: 463 TPDQLCTLSQFFQLEKYPSGRQFKQLAKTLNLSERKVKNWFTEQRR 508


>gi|327264175|ref|XP_003216891.1| PREDICTED: homeobox protein NANOG-like [Anolis carolinensis]
          Length = 317

 Score = 44.3 bits (103), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 30/46 (65%)

Query: 10  QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           Q + L   +  +KY +  ++  LAAALDLTYKQ++TWF  +R + K
Sbjct: 101 QLQILHHRFQNQKYLSPQQIRELAAALDLTYKQIKTWFQNQRMKFK 146


>gi|4262153|gb|AAD14453.1| putative DNA-binding protein [Arabidopsis thaliana]
 gi|7270195|emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana]
 gi|20152542|emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana]
 gi|111074212|gb|ABH04479.1| At4g03250 [Arabidopsis thaliana]
          Length = 476

 Score = 44.3 bits (103), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)

Query: 13 ALLKFYSEEKYPTKSEMEG-LAAALDLTYKQVRTWFIEKRRRDK 55
          AL  FY+E KYPT+ EM+G LA  + LT KQV  WF  +R +DK
Sbjct: 2  ALENFYNEHKYPTE-EMKGKLAEEVGLTEKQVSGWFCHRRLKDK 44


>gi|405968593|gb|EKC33653.1| Iroquois-class homeodomain protein IRX-6 [Crassostrea gigas]
          Length = 505

 Score = 44.3 bits (103), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 30/56 (53%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R+T    KA LK + +  YPTK+E   LA    +T  Q+ TWF   RRR K +N
Sbjct: 183 ATRETTAPLKAWLKEHMKNPYPTKAEKVMLAIVTKMTLTQISTWFANARRRLKKEN 238


>gi|334262074|gb|AEG74407.1| nanog, partial [Carassius auratus]
          Length = 323

 Score = 44.3 bits (103), Expect = 0.47,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 30/46 (65%)

Query: 10  QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           Q  AL+  ++ ++Y T +EM  LA A  LTYKQV+TWF  +R + K
Sbjct: 184 QMNALIHRFNIQRYLTPAEMRTLAGATGLTYKQVKTWFQNRRMKLK 229


>gi|393218098|gb|EJD03586.1| hypothetical protein FOMMEDRAFT_166956 [Fomitiporia mediterranea
           MF3/22]
          Length = 611

 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 8/80 (10%)

Query: 18  YSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGI-----VIP---SSSSKK 69
           +S+ +YPT ++ E LA    ++YKQ+  WF  +R R K +N +     V P   S+S  K
Sbjct: 171 FSKCQYPTHADKELLAKKTGMSYKQIHVWFQNRRSRTKKNNALSLDNQVAPGLLSASVPK 230

Query: 70  LKGFHGRNRLGVVSAKIVKK 89
              F G N   V  +    K
Sbjct: 231 AAAFVGHNPPYVYPSTYPPK 250


>gi|326917275|ref|XP_003204926.1| PREDICTED: iroquois-class homeodomain protein IRX-4-like [Meleagris
           gallopavo]
          Length = 319

 Score = 43.9 bits (102), Expect = 0.54,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 11/95 (11%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPS 64
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N  ++  
Sbjct: 150 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKCMLKR 209

Query: 65  SSSKKLKGFHGRNRLGVVSAKIV---KKQDSLIHN 96
           S         G      VSA +    + QDS + N
Sbjct: 210 SG--------GSATAAAVSAPVNVMDRHQDSPVTN 236


>gi|114598888|ref|XP_001175262.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Pan
           troglodytes]
          Length = 293

 Score = 43.9 bits (102), Expect = 0.54,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 146 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 204


>gi|308806029|ref|XP_003080326.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
 gi|116058786|emb|CAL54493.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
          Length = 1121

 Score = 43.9 bits (102), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG DR    YW   G       G K   +  S DG+W + +++ A+ AL++ L+ +G +E
Sbjct: 37  LGMDRHLTTYWWNFG-------GRKDGIYVQSFDGNWGIYNSQAAVDALVNALNTKGTRE 89

Query: 851 ALLIESLEKRE 861
             L + LEKR+
Sbjct: 90  NALKKQLEKRK 100


>gi|268563024|ref|XP_002646832.1| Hypothetical protein CBG19514 [Caenorhabditis briggsae]
          Length = 864

 Score = 43.9 bits (102), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query: 7   TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRD 54
           T  Q + LL    E  YPTK + E LA   DLT +Q+R+WF   RR++
Sbjct: 83  TEEQYRLLLATLQENHYPTKEQREELAEKADLTRQQIRSWFERNRRKN 130


>gi|218185249|gb|EEC67676.1| hypothetical protein OsI_35107 [Oryza sativa Indica Group]
          Length = 1888

 Score = 43.9 bits (102), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 115/270 (42%), Gaps = 47/270 (17%)

Query: 353 KFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFH-DK 411
           + PP+S  +  P          E +  LF V++FL +++  + +  F LD+F  + +   
Sbjct: 322 ELPPSSGDIAVP---------EEAISYLFSVYNFLRSFSVQLFLSPFGLDDFVSSVNCTT 372

Query: 412 DSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLN 471
            + LL  +HV+LL+ L   +E +   G    L ++   L  L            W   L+
Sbjct: 373 QNTLLDAVHVSLLRALRRHLETKSSEG----LKLASNCLKYLD-----------WTL-LD 416

Query: 472 PLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQGNN 531
            LTW   L + L   G     G  R        +L ++Y   P TLK  + ++L +   +
Sbjct: 417 SLTWPAFLLEYLYVMGIIKDLGGRR----FGRSVLAIEYYKLPVTLKLRILQLLCDHVID 472

Query: 532 GSKVCQLARSSQIAELNLESTTEEVELLISSTLSSDITLFEKI-----ASSTYRL----R 582
             ++      +++ E   E  +EE+E  + S+  +++     +     AS+  +L     
Sbjct: 473 SEEL-----KTELEE--REGYSEEMEYEMDSSTFAEVGSRSVLTRGSKASACKKLDALQN 525

Query: 583 INTSKEADDFESDAEDIGSVDDNSDDDDTC 612
           + T++  ++ ES A    S D NSDD   C
Sbjct: 526 LETAQNGNNPES-ASTHASQDGNSDDCRIC 554


>gi|224144403|ref|XP_002325278.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
 gi|222862153|gb|EEE99659.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
          Length = 616

 Score = 43.5 bits (101), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 14/127 (11%)

Query: 760 SKSCGKEKSSSVKDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYF 819
           SK  GK+K+    + +  E   +   + +  LG DR YNRYW F            R++ 
Sbjct: 473 SKKTGKKKNM---NREYFEREIEKRILHTNPLGKDRDYNRYWWF--------KRDGRMFV 521

Query: 820 ESSEDGHWEVIDTEEALRALLSVLDDRGRQEALLIESLEKREAFLC---QAMSSGLVNNT 876
           ESS+   W     +E +  L+  L+ +G +E  L + +EK  + +C   Q  S  L N  
Sbjct: 522 ESSDSKLWGYYCCKEEIDLLMGSLNPKGEREKALRKQVEKFYSRICMELQKRSKDLANRI 581

Query: 877 EIRHVAQ 883
            +    Q
Sbjct: 582 ALEEAVQ 588


>gi|328864887|gb|EGG13273.1| DDT domain-containing protein [Dictyostelium fasciculatum]
          Length = 761

 Score = 43.5 bits (101), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 8/121 (6%)

Query: 772 KDAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVID 831
           K  +  EV  D +  +   LG DR YN+YW +        PG  R++ E++ +G W    
Sbjct: 635 KKEENLEVKLDQYSSRYEALGKDRDYNKYWYWSQL-----PG--RLFIETT-NGDWSFYT 686

Query: 832 TEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAMSSGLVNNTEIRHVAQSDQSELDL 891
           + + L  L+  LD RG +E  LI  ++ +   +  +M S  +  T   +  Q   + + +
Sbjct: 687 SRQELEDLMQYLDHRGVRERKLINVIKAKYDNIANSMDSRTLQITNQLNYEQKRSARIKM 746

Query: 892 V 892
           +
Sbjct: 747 I 747


>gi|147898590|ref|NP_001090204.1| iroquois-class homeodomain protein irx-4-A [Xenopus laevis]
 gi|82108525|sp|Q90XW6.1|IRX4A_XENLA RecName: Full=Iroquois-class homeodomain protein irx-4-A; AltName:
           Full=Iroquois homeobox protein 4-A
 gi|15383983|gb|AAK96065.1|AF338157_1 iroquois-4 homeobox transcription factor [Xenopus laevis]
          Length = 496

 Score = 43.5 bits (101), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 150 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 208


>gi|402578101|gb|EJW72056.1| homeobox domain-containing protein, partial [Wuchereria
          bancrofti]
          Length = 115

 Score = 43.5 bits (101), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 29/50 (58%)

Query: 7  TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKG 56
          T L  K L +FY + KYPT  + + +A   DL   Q+  WF  +R+RDKG
Sbjct: 47 TDLLVKILRQFYRKNKYPTLEDKKEIARITDLKIIQISNWFKNRRQRDKG 96


>gi|238637235|ref|NP_001154863.1| iroquois-class homeodomain protein irx-4-B [Xenopus laevis]
 gi|263431784|sp|B7ZRT8.1|IRX4B_XENLA RecName: Full=Iroquois-class homeodomain protein irx-4-B; AltName:
           Full=Iroquois homeobox protein 4-B
 gi|213626269|gb|AAI70284.1| Unknown (protein for MGC:197011) [Xenopus laevis]
          Length = 495

 Score = 43.5 bits (101), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 150 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 208


>gi|242075880|ref|XP_002447876.1| hypothetical protein SORBIDRAFT_06g017345 [Sorghum bicolor]
 gi|241939059|gb|EES12204.1| hypothetical protein SORBIDRAFT_06g017345 [Sorghum bicolor]
          Length = 566

 Score = 43.5 bits (101), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 8/82 (9%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG DR YN+YW F+  C        R++ ES     W    T++ L ALL   + +G +E
Sbjct: 462 LGKDRFYNKYWFFM--C------EGRLFVESENSREWGYYSTKQELDALLGSFNIKGIRE 513

Query: 851 ALLIESLEKREAFLCQAMSSGL 872
             L   L+K    +  A+ S L
Sbjct: 514 RALKRQLDKLYDKISNALESRL 535


>gi|7269403|emb|CAB81363.1| putative homeodomain-protein [Arabidopsis thaliana]
          Length = 689

 Score = 43.5 bits (101), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 30/54 (55%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R+T  Q + L KFY E  +PT+ +   L   L++   QV+ WF  KR  +K +N
Sbjct: 45 RRTAYQTQELEKFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKVNN 98


>gi|297813979|ref|XP_002874873.1| homeobox-leucine zipper family protein [Arabidopsis lyrata subsp.
          lyrata]
 gi|297320710|gb|EFH51132.1| homeobox-leucine zipper family protein [Arabidopsis lyrata subsp.
          lyrata]
          Length = 480

 Score = 43.5 bits (101), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 26/43 (60%)

Query: 13 ALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          AL  FY+E KYPT+     LA  + LT KQV  WF  +R +DK
Sbjct: 2  ALENFYNEHKYPTEDMKGKLAEEVGLTEKQVSGWFCHRRLKDK 44


>gi|393244447|gb|EJD51959.1| hypothetical protein AURDEDRAFT_111507 [Auricularia delicata
           TFB-10046 SS5]
          Length = 627

 Score = 43.1 bits (100), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 28/51 (54%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           +K P     LL  + + + PTK E E LAA   LT +QVR WF  +R R K
Sbjct: 121 QKQPYANDVLLYAFEQSQNPTKREREQLAALTGLTREQVRVWFQNRRSRSK 171


>gi|308220120|gb|ADO22632.1| SIX class homeobox transcription factor SIX13a [Mnemiopsis leidyi]
          Length = 342

 Score = 43.1 bits (100), Expect = 0.83,   Method: Composition-based stats.
 Identities = 21/42 (50%), Positives = 25/42 (59%)

Query: 14  LLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           L +FY + KYPT  E + L+   DLTY QV  WF  KR R K
Sbjct: 291 LEEFYQQNKYPTPLEKKELSERCDLTYMQVCNWFKNKRMRGK 332


>gi|82084460|sp|Q688D0.1|IRX4_XENTR RecName: Full=Iroquois-class homeodomain protein irx-4; AltName:
           Full=Iroquois homeobox protein 4
 gi|51890231|gb|AAU12854.1| Irx4 [Xenopus (Silurana) tropicalis]
          Length = 496

 Score = 43.1 bits (100), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 150 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 208


>gi|452881609|ref|NP_001263621.1| iroquois-class homeodomain protein irx-4 [Xenopus (Silurana)
           tropicalis]
          Length = 496

 Score = 43.1 bits (100), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 150 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 208


>gi|410905171|ref|XP_003966065.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like
           [Takifugu rubripes]
          Length = 471

 Score = 43.1 bits (100), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 150 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 208


>gi|395510753|ref|XP_003759635.1| PREDICTED: iroquois-class homeodomain protein irx-4-B-like
           [Sarcophilus harrisii]
          Length = 511

 Score = 43.1 bits (100), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 151 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 209


>gi|222615525|gb|EEE51657.1| hypothetical protein OsJ_32971 [Oryza sativa Japonica Group]
          Length = 1888

 Score = 43.1 bits (100), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 30/177 (16%)

Query: 353 KFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFH-DK 411
           + PP+S  +  P          E +  LF V++FL +++  + +  F LD+F  + +   
Sbjct: 322 ELPPSSGDIAVP---------EEAISYLFSVYNFLRSFSVQLFLSPFGLDDFVSSVNCTT 372

Query: 412 DSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLN 471
            + LL  +HV+LL+ L   +E +   G    L ++   L  L            W   L+
Sbjct: 373 QNTLLDAVHVSLLRALRRHLETKSSEG----LKLASNCLKYLD-----------WTL-LD 416

Query: 472 PLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQ 528
            LTW   L + L   G     G  R        +L ++Y   P TLK  + ++L + 
Sbjct: 417 SLTWPAFLLEYLYVMGIIKDLGGRR----FGRSVLAIEYYKLPVTLKLRILQLLCDH 469


>gi|346703214|emb|CBX25313.1| hypothetical_protein [Oryza brachyantha]
          Length = 1891

 Score = 43.1 bits (100), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 36/182 (19%)

Query: 351 LAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFH- 409
           + + PP+S  +  P          E +  LF V++FL +++  + +  F LD+F  A + 
Sbjct: 304 VPELPPSSGDIAVP---------EEAISYLFSVYNFLRSFSVQLFLSPFGLDDFVSAINC 354

Query: 410 DKDSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSC-KFL--ALLHSVENQEFFVEFW 466
              + LL  +HV+LL+ L   +E +   G    L+ +C ++L  ALL S           
Sbjct: 355 TVQNTLLDAVHVSLLRALRRHLETKSSEGL--KLASNCLRYLDWALLDS----------- 401

Query: 467 NKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILL 526
                 LTW   L + L   G     G    +S  +  +L ++Y   P TLK  + ++L 
Sbjct: 402 ------LTWPAFLLEYLYVMGIIKDLGG---QSFGRR-VLAIEYYKLPVTLKLRILQLLC 451

Query: 527 EQ 528
           + 
Sbjct: 452 DH 453


>gi|403416441|emb|CCM03141.1| predicted protein [Fibroporia radiculosa]
          Length = 632

 Score = 43.1 bits (100), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 29/54 (53%)

Query: 14  LLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSS 67
           L  F+  + +P++ +   LAA   L YKQ+  WF  +R R KGD  I   S SS
Sbjct: 160 LEDFFECDPFPSREDKLSLAAKTALEYKQINVWFQNRRNRSKGDRNISRESGSS 213


>gi|302803753|ref|XP_002983629.1| hypothetical protein SELMODRAFT_422900 [Selaginella
          moellendorffii]
 gi|300148466|gb|EFJ15125.1| hypothetical protein SELMODRAFT_422900 [Selaginella
          moellendorffii]
          Length = 603

 Score = 43.1 bits (100), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 34/52 (65%)

Query: 4  KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          K KTP Q + L + Y+E+KYP++     L+  L+LT +QV+ WF  +R +D+
Sbjct: 9  KMKTPSQLEILERVYAEDKYPSEIVRSELSHQLNLTDRQVKMWFCHRRLKDR 60


>gi|62701668|gb|AAX92741.1| expressed protein [Oryza sativa Japonica Group]
 gi|62701669|gb|AAX92742.1| expressed protein [Oryza sativa Japonica Group]
 gi|77548688|gb|ABA91485.1| PHD-finger family protein, expressed [Oryza sativa Japonica Group]
 gi|77548689|gb|ABA91486.1| PHD-finger family protein, expressed [Oryza sativa Japonica Group]
          Length = 1884

 Score = 43.1 bits (100), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 30/177 (16%)

Query: 353 KFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFH-DK 411
           + PP+S  +  P          E +  LF V++FL +++  + +  F LD+F  + +   
Sbjct: 318 ELPPSSGDIAVP---------EEAISYLFSVYNFLRSFSVQLFLSPFGLDDFVSSVNCTT 368

Query: 412 DSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLN 471
            + LL  +HV+LL+ L   +E +   G    L ++   L  L            W   L+
Sbjct: 369 QNTLLDAVHVSLLRALRRHLETKSSEG----LKLASNCLKYLD-----------WTL-LD 412

Query: 472 PLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQ 528
            LTW   L + L   G     G  R        +L ++Y   P TLK  + ++L + 
Sbjct: 413 SLTWPAFLLEYLYVMGIIKDLGGRR----FGRSVLAIEYYKLPVTLKLRILQLLCDH 465


>gi|348512342|ref|XP_003443702.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like
           [Oreochromis niloticus]
          Length = 473

 Score = 43.1 bits (100), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 148 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 207

Query: 63  P 63
           P
Sbjct: 208 P 208


>gi|156370953|ref|XP_001628531.1| predicted protein [Nematostella vectensis]
 gi|156215510|gb|EDO36468.1| predicted protein [Nematostella vectensis]
          Length = 237

 Score = 43.1 bits (100), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)

Query: 7   TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKR-------RRDKGDNG 59
           T  Q K L  +YS  +Y ++ E   LA AL++T  QVR WF  +R        R+K  +G
Sbjct: 161 TERQLKYLETYYSNGRYLSRDERTVLAQALEMTELQVRNWFQNRRYQRKQKQEREKAADG 220

Query: 60  IVIPSSSSKKLK 71
           + + + S+K  K
Sbjct: 221 VALENDSTKAAK 232


>gi|19486|emb|CAA47871.1| homeobox transcription factor Hox7 [Solanum peruvianum]
          Length = 157

 Score = 43.1 bits (100), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 33/54 (61%)

Query: 6  KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNG 59
          KTP Q + L + Y+ E YP+++    L+  L LT +Q++ WF  +R +DK  +G
Sbjct: 19 KTPFQLETLERVYAMETYPSEAIRAELSEKLGLTDRQLQMWFCHRRLKDKNTSG 72


>gi|432908322|ref|XP_004077810.1| PREDICTED: iroquois-class homeodomain protein irx-4-like [Oryzias
           latipes]
          Length = 470

 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 148 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 207

Query: 63  P 63
           P
Sbjct: 208 P 208


>gi|296082654|emb|CBI21659.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 8/75 (10%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG D+ YNRYW F            R++ ES +   W    T+E L A    L+ +G +E
Sbjct: 582 LGKDKDYNRYWFFRR--------DGRIFVESWDSKQWGYYSTKEELDAFKGSLNRKGVRE 633

Query: 851 ALLIESLEKREAFLC 865
             L   LEK    +C
Sbjct: 634 RALQSQLEKSNNKIC 648


>gi|401066066|gb|AFP90860.1| NANOGP8 [Homo sapiens]
          Length = 305

 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 13/91 (14%)

Query: 18  YSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSSKKLKGFHGRN 77
           +  +KY +  +M+GL+  L+L+YKQV+TWF  +R + K            +  K    +N
Sbjct: 114 FQRQKYLSLQQMQGLSNILNLSYKQVKTWFQNQRMKSK------------RWQKNNWPKN 161

Query: 78  RLGVVSAKIVKKQDSLIHNKHLSLMVCNGTG 108
             GV          SL  + H   +V N TG
Sbjct: 162 SNGVTQKASAPTYPSLYSSYHQGCLV-NPTG 191


>gi|48976089|ref|NP_001001744.1| iroquois-class homeodomain protein IRX-4 [Gallus gallus]
 gi|25453057|sp|Q9YGS0.1|IRX4_CHICK RecName: Full=Iroquois-class homeodomain protein IRX-4; AltName:
           Full=Iroquois homeobox protein 4
 gi|4322577|gb|AAD16100.1| iroquois-related homeobox transcription factor [Gallus gallus]
          Length = 485

 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 148 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 207

Query: 63  P 63
           P
Sbjct: 208 P 208


>gi|449272822|gb|EMC82546.1| Homeobox protein NANOG, partial [Columba livia]
          Length = 229

 Score = 42.7 bits (99), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 30/46 (65%)

Query: 10  QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           Q + L + +  +KY +  ++  LAAAL LTYKQV+TWF  +R + K
Sbjct: 58  QLQTLHQRFQSQKYLSPQQIRELAAALGLTYKQVKTWFQNRRMKLK 103


>gi|449272821|gb|EMC82545.1| Homeobox protein NANOG [Columba livia]
          Length = 314

 Score = 42.7 bits (99), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 14/73 (19%)

Query: 10  QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKG--------DNGIV 61
           Q + L + +  +KY +  ++  LAAAL LTYKQV+TWF  +R + K         + G+ 
Sbjct: 114 QLQILHQRFQSQKYLSPQQIRELAAALGLTYKQVKTWFQNQRMKYKRCQRESQWVEKGVY 173

Query: 62  IPSSSSKKLKGFH 74
           +P +      GFH
Sbjct: 174 LPQN------GFH 180


>gi|357149537|ref|XP_003575146.1| PREDICTED: uncharacterized protein LOC100841967 [Brachypodium
           distachyon]
          Length = 608

 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LGSDR YNRYW F            R++ E+++   W    ++E L  L+  L+ +G +E
Sbjct: 493 LGSDRHYNRYWFF--------KREGRLFVENADSREWGYYSSKEELDVLMGSLNVKGIRE 544

Query: 851 ALLIESLEKREAFLCQAMSSGLVNNT 876
             L   LE     +  A+   L + T
Sbjct: 545 RALKRQLENFYNTISNALEKRLKDIT 570


>gi|47215229|emb|CAF96727.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 420

 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 148 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 207

Query: 63  P 63
           P
Sbjct: 208 P 208


>gi|54291725|ref|NP_991261.1| iroquois-class homeodomain protein IRX-4 [Danio rerio]
 gi|41946909|gb|AAH65966.1| Iroquois homeobox protein 4a [Danio rerio]
          Length = 440

 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 146 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 204


>gi|255544393|ref|XP_002513258.1| conserved hypothetical protein [Ricinus communis]
 gi|223547632|gb|EEF49126.1| conserved hypothetical protein [Ricinus communis]
          Length = 718

 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 8/75 (10%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG DR YNRYW F            R++ ESS+   W     +E L AL+  L+ +G +E
Sbjct: 603 LGKDRDYNRYWWF--------RRDGRIFIESSDSKLWGYYSGKEELDALMGSLNCKGVRE 654

Query: 851 ALLIESLEKREAFLC 865
             L   L+K  + +C
Sbjct: 655 KALQIQLQKLYSRIC 669


>gi|57164996|gb|AAW34337.1| Iroquois 4a protein [Danio rerio]
          Length = 438

 Score = 42.7 bits (99), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 146 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 204


>gi|8978355|dbj|BAA98208.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1515

 Score = 42.7 bits (99), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 25/156 (16%)

Query: 375 ETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQA-FHDKDSMLLGKIHVALLKLLLSDVEM 433
           E V  L  V+ FL +++  + IC F L++F  A +    + LL  +HVALL+ L   +E 
Sbjct: 193 EAVAHLLSVYGFLRSFSFQLYICPFELNDFVGALYFSGPNSLLDAVHVALLRALKGHLE- 251

Query: 434 ELGRGCPPHLSVSCKFLA--LLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSK 491
                    LS S   LA   L  ++        W+  L+ LTW   L Q   A G    
Sbjct: 252 --------RLSSSKSVLASKCLRCID--------WSL-LDVLTWPVYLVQYFTAMG---- 290

Query: 492 QGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLE 527
             S  + ++  + ++ ++Y   P  +K ++ +IL +
Sbjct: 291 HASGPQWNIFNKFVVEIEYYSLPIGMKLKILQILCD 326


>gi|357153170|ref|XP_003576362.1| PREDICTED: uncharacterized protein LOC100837721 [Brachypodium
           distachyon]
          Length = 2116

 Score = 42.7 bits (99), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 55/274 (20%)

Query: 353 KFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFH-DK 411
           + PP+S  +  P          E++  LF  ++FL ++   + +  F LD+F  + +   
Sbjct: 519 ELPPSSADIAVP---------EESISYLFSAYNFLRSFNVQLFLSPFGLDDFVASINCTV 569

Query: 412 DSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSC-KFL--ALLHSVENQEFFVEFWNK 468
            + LL  +HV+LL++L   +E +   G    L+ +C KF+  ALL +             
Sbjct: 570 QNTLLDAVHVSLLRVLRRHLETKSSDGS--ELASNCLKFVDWALLDA------------- 614

Query: 469 SLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQ 528
               LTW   L + L   G     G    +S  +  + +  Y L P T+K  L +IL + 
Sbjct: 615 ----LTWPTFLLEYLYIMGCMKSLGG---KSFGRTFLAIEYYKL-PVTMKLRLLQILCD- 665

Query: 529 GNNGSKVCQLARSSQI-AELNL-ESTTEEVEL-----LISSTLSSDITLFEKIASSTYRL 581
                    +A S ++ AEL   E   E++E      ++S   S  ++     AS   ++
Sbjct: 666 --------HVAESEELKAELEAREGYNEDIEYDTDSSILSEAGSRAVSTRASKASVLNKI 717

Query: 582 R-INTSKEADDFESDAEDI--GSVDDNSDDDDTC 612
             + +S+ A +      D+   S D NSDD   C
Sbjct: 718 EGLQSSETAPNVSQPETDLPNASQDGNSDDCRIC 751


>gi|334325458|ref|XP_003340649.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like, partial
           [Monodelphis domestica]
          Length = 400

 Score = 42.7 bits (99), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 151 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 209


>gi|334188015|ref|NP_198371.3| DNA binding and zinc-finger domain-containing protein [Arabidopsis
           thaliana]
 gi|332006563|gb|AED93946.1| DNA binding and zinc-finger domain-containing protein [Arabidopsis
           thaliana]
          Length = 1539

 Score = 42.7 bits (99), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 25/156 (16%)

Query: 375 ETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFH-DKDSMLLGKIHVALLKLLLSDVEM 433
           E V  L  V+ FL +++  + IC F L++F  A +    + LL  +HVALL+ L   +E 
Sbjct: 193 EAVAHLLSVYGFLRSFSFQLYICPFELNDFVGALYFSGPNSLLDAVHVALLRALKGHLE- 251

Query: 434 ELGRGCPPHLSVSCKFLA--LLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSK 491
                    LS S   LA   L  ++        W+  L+ LTW   L Q   A G    
Sbjct: 252 --------RLSSSKSVLASKCLRCID--------WSL-LDVLTWPVYLVQYFTAMG---- 290

Query: 492 QGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLE 527
             S  + ++  + ++ ++Y   P  +K ++ +IL +
Sbjct: 291 HASGPQWNIFNKFVVEIEYYSLPIGMKLKILQILCD 326


>gi|355699055|gb|AES01002.1| LAG1-like protein, ceramide synthase 5 [Mustela putorius furo]
          Length = 311

 Score = 42.7 bits (99), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)

Query: 8  PLQAKALLK--FYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          P Q  A+L+  F S  KYP +  +EGL+  LD   ++++ WF  +R +DK
Sbjct: 44 PAQPNAILEKVFISITKYPDEKRLEGLSKQLDWDVRKIQCWFRHRRNQDK 93


>gi|339246043|ref|XP_003374655.1| putative PHD finger protein [Trichinella spiralis]
 gi|316972140|gb|EFV55831.1| putative PHD finger protein [Trichinella spiralis]
          Length = 754

 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 19/84 (22%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPG---HKRVYFESSEDGH------------WEVIDTEEA 835
           LG+DR YNRYW F     ++ PG    K  Y  S+ DG+            W   DTEE 
Sbjct: 409 LGTDRCYNRYWFF----GKWLPGLFVEKGCYQCSTFDGNNDENCSSAAAYQWCHYDTEEQ 464

Query: 836 LRALLSVLDDRGRQEALLIESLEK 859
           +R L+  L D+G +E+ L +++ K
Sbjct: 465 IRELVDHLLDKGERESQLKKAILK 488


>gi|327270173|ref|XP_003219864.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like [Anolis
           carolinensis]
          Length = 471

 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 152 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 210


>gi|109130462|ref|XP_001088535.1| PREDICTED: homeobox protein NANOG-like [Macaca mulatta]
          Length = 300

 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 13/91 (14%)

Query: 18  YSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSSKKLKGFHGRN 77
           +  +KY +  +M+ L+A L+L+YKQV+TWF  +R + K            ++ K    +N
Sbjct: 114 FQRQKYLSLQQMQELSAILNLSYKQVKTWFQNQRMKSK------------RRQKNNWPKN 161

Query: 78  RLGVVSAKIVKKQDSLIHNKHLSLMVCNGTG 108
             GV          +L  + H   +V N TG
Sbjct: 162 SSGVTQKASAPTYPTLYSSYHQGCLV-NTTG 191


>gi|390599441|gb|EIN08837.1| hypothetical protein PUNSTDRAFT_134013 [Punctularia
          strigosozonata HHB-11173 SS5]
          Length = 204

 Score = 42.4 bits (98), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 28/50 (56%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRD 54
          R +P  A+ L +F++   YPT  E  GL   +  T K+V  WF  +R+RD
Sbjct: 43 RASPEHAEKLERFFAANPYPTTEEKVGLGFEIGWTEKKVTVWFQNRRQRD 92


>gi|356541977|ref|XP_003539448.1| PREDICTED: uncharacterized protein LOC100808614 [Glycine max]
          Length = 1613

 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 36/186 (19%)

Query: 374 PE-TVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDS-MLLGKIHVALLKLL---L 428
           PE  V  LF V+ FL +++  + +  FTLDEF  A + K S  LL  IHV+L+ +L   L
Sbjct: 181 PEPCVLNLFSVYGFLRSFSIRLFLSPFTLDEFVGALNCKVSNTLLDAIHVSLMHILKRHL 240

Query: 429 SDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGF 488
            ++  +  R  P    + C   +L                 L+ LTW   + Q L  A F
Sbjct: 241 ENISPDGSR--PATKCLRCSDWSL-----------------LDALTWPVFVFQYL--AIF 279

Query: 489 GSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAELN 548
           G  +G   K    +  I   +Y L P + K  + +IL ++         LA     AE+N
Sbjct: 280 GYTKGPEWKGFYDE--IFYGEYYLLPASRKLTILQILCDE--------VLASEELKAEMN 329

Query: 549 LESTTE 554
           +   +E
Sbjct: 330 MREESE 335


>gi|156407960|ref|XP_001641625.1| predicted protein [Nematostella vectensis]
 gi|156228764|gb|EDO49562.1| predicted protein [Nematostella vectensis]
          Length = 154

 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 33/59 (55%)

Query: 7   TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           T +Q   L K +   +Y TK     +A  LDLT +QV+ WF  +R + K DN  VIP+S
Sbjct: 87  TRIQLLELEKEFHFTRYLTKERRTEMARMLDLTERQVKIWFQNRRMKWKKDNKPVIPTS 145


>gi|224046681|ref|XP_002199378.1| PREDICTED: zinc fingers and homeoboxes protein 2 [Taeniopygia
           guttata]
          Length = 833

 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 16/146 (10%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRR-RDKGDNGIVI 62
           K KT  Q +AL + + +  +PT+ E++ L     L+ +++ +WF E+R+ RD  +  ++ 
Sbjct: 532 KEKTQEQLRALEESFLKCSFPTQGELDRLRVETKLSRREIDSWFSERRKIRDSMEQAVLD 591

Query: 63  PSSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKKNAVTVLQDLLT 122
              S +K+K     N  G +S      Q  L+ +  L        G    + T L+    
Sbjct: 592 SMGSYRKIKDQGTPN--GAIS------QAELLSSSQLP-------GALSGSSTTLKKTQE 636

Query: 123 SDYILKKVFRKDGPPLGVEFDSLPSQ 148
             ++LK  F +   P   E+D L SQ
Sbjct: 637 QIHLLKSTFARTQWPSPQEYDQLASQ 662


>gi|344258358|gb|EGW14462.1| Iroquois-class homeodomain protein IRX-4 [Cricetulus griseus]
          Length = 431

 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 69  RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 127


>gi|253828361|gb|ACT36586.1| Anthox1a, partial [Nematostella vectensis]
          Length = 153

 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 33/59 (55%)

Query: 7   TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           T +Q   L K +   +Y TK     +A  LDLT +QV+ WF  +R + K DN  VIP+S
Sbjct: 86  TRIQLLELEKEFHFTRYLTKERRTEMARMLDLTERQVKIWFQNRRMKWKKDNKPVIPTS 144


>gi|302784160|ref|XP_002973852.1| hypothetical protein SELMODRAFT_100168 [Selaginella moellendorffii]
 gi|300158184|gb|EFJ24807.1| hypothetical protein SELMODRAFT_100168 [Selaginella moellendorffii]
          Length = 505

 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)

Query: 354 FPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDS 413
            PP S   ++P  +  +    E V  L  V+ F   +A  ++I  FTLD+F +A   K+ 
Sbjct: 292 LPPPS---ERPAPSSEFSVPAECVGHLLMVWDFCSAFATSLEITQFTLDDFEEALCSKEE 348

Query: 414 M--LLGKIHVALLKLLLSDVEM 433
              LL ++H ALLK +LS+  +
Sbjct: 349 ECPLLEEVHHALLKAILSNTNL 370


>gi|90079599|dbj|BAE89479.1| unnamed protein product [Macaca fascicularis]
          Length = 302

 Score = 42.4 bits (98), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 4/52 (7%)

Query: 8   PLQAK--ALLK--FYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           P QA+  A+L+  F S  KYP K  +EGL+  LD   ++++ WF  +R +DK
Sbjct: 83  PYQAQPNAILEKVFVSITKYPDKKRLEGLSKQLDWNVRKIQCWFRHRRNQDK 134


>gi|354506372|ref|XP_003515237.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Cricetulus
           griseus]
          Length = 486

 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 122 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 181

Query: 63  P 63
           P
Sbjct: 182 P 182


>gi|351708278|gb|EHB11197.1| Iroquois-class homeodomain protein IRX-4, partial [Heterocephalus
           glaber]
          Length = 426

 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 32/60 (53%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPS 64
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P+
Sbjct: 52  RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWPA 111


>gi|443701875|gb|ELU00101.1| hypothetical protein CAPTEDRAFT_88378, partial [Capitella teleta]
          Length = 76

 Score = 42.4 bits (98), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/56 (41%), Positives = 29/56 (51%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGI 60
          R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K DN +
Sbjct: 16 RESTTTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKDNKV 71


>gi|313216211|emb|CBY37561.1| unnamed protein product [Oikopleura dioica]
          Length = 256

 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 30/54 (55%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R++  Q KA LK + +  YPTK E   LA    ++  QV TWF   RRR K +N
Sbjct: 90  RESTQQLKAWLKDHQKNPYPTKGEKIMLALVSGMSLTQVSTWFANARRRLKKEN 143


>gi|18858901|ref|NP_571898.1| iroquois homeobox protein 1, b [Danio rerio]
 gi|14764399|gb|AAK08650.1| iroquois homeobox protein Ziro1 [Danio rerio]
          Length = 445

 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 126 RETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 182


>gi|443692475|gb|ELT94068.1| hypothetical protein CAPTEDRAFT_227938 [Capitella teleta]
          Length = 506

 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 27/48 (56%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNG 59
           +AL + Y + +YPT  E   LA    LT  QV  WF  +R+RD+  +G
Sbjct: 226 QALKECYKQNRYPTPDEKRALAKKTGLTLTQVSNWFKNRRQRDRTPHG 273


>gi|20530591|gb|AAM27167.1|AF414134_1 iroquois 1 [Danio rerio]
          Length = 419

 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 100 RETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 156


>gi|334188013|ref|NP_851094.2| DNA binding and zinc-finger domain-containing protein [Arabidopsis
           thaliana]
 gi|332006562|gb|AED93945.1| DNA binding and zinc-finger domain-containing protein [Arabidopsis
           thaliana]
          Length = 1706

 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 25/156 (16%)

Query: 375 ETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFH-DKDSMLLGKIHVALLKLLLSDVEM 433
           E V  L  V+ FL +++  + IC F L++F  A +    + LL  +HVALL+ L   +E 
Sbjct: 193 EAVAHLLSVYGFLRSFSFQLYICPFELNDFVGALYFSGPNSLLDAVHVALLRALKGHLE- 251

Query: 434 ELGRGCPPHLSVSCKFLA--LLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAGFGSK 491
                    LS S   LA   L  ++        W+  L+ LTW   L Q   A G    
Sbjct: 252 --------RLSSSKSVLASKCLRCID--------WSL-LDVLTWPVYLVQYFTAMG---- 290

Query: 492 QGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLE 527
             S  + ++  + ++ ++Y   P  +K ++ +IL +
Sbjct: 291 HASGPQWNIFNKFVVEIEYYSLPIGMKLKILQILCD 326


>gi|32263856|gb|AAA86634.2| HOM/Hox class homeobox protein [Nematostella vectensis]
          Length = 155

 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 33/59 (55%)

Query: 7   TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           T +Q   L K +   +Y TK     +A  LDLT +QV+ WF  +R + K DN  VIP+S
Sbjct: 88  TRIQLLELEKEFHFTRYLTKERRTEMARMLDLTERQVKIWFQNRRMKWKKDNKPVIPTS 146


>gi|449139031|gb|AGE89846.1| mirror, partial [Ceratitis capitata]
          Length = 80

 Score = 42.4 bits (98), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 28/54 (51%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 24 RETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 77


>gi|441615031|ref|XP_003263249.2| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-4 [Nomascus leucogenys]
          Length = 500

 Score = 42.4 bits (98), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 141 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 199


>gi|56694856|gb|AAW23090.1| Irx-b [Oikopleura dioica]
 gi|313233986|emb|CBY10154.1| unnamed protein product [Oikopleura dioica]
          Length = 256

 Score = 42.4 bits (98), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 30/54 (55%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R++  Q KA LK + +  YPTK E   LA    ++  QV TWF   RRR K +N
Sbjct: 90  RESTQQLKAWLKDHQKNPYPTKGEKIMLALVSGMSLTQVSTWFANARRRLKKEN 143


>gi|432104635|gb|ELK31247.1| Iroquois-class homeodomain protein IRX-4 [Myotis davidii]
          Length = 460

 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 105 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 164

Query: 63  P 63
           P
Sbjct: 165 P 165


>gi|63102405|gb|AAH95294.1| Zhx3 protein [Danio rerio]
          Length = 1074

 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 30/50 (60%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRR 53
           K + P Q +AL   +++E  PT  E++ L A   +T +++  WF E+RRR
Sbjct: 738 KEREPHQVRALEASFTQEPDPTSEEVDRLRAETKMTRREIHGWFAERRRR 787


>gi|50418124|gb|AAH77101.1| Iroquois homeobox protein 1, b [Danio rerio]
          Length = 445

 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 126 RETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 182


>gi|238054048|ref|NP_001153902.1| Nanog protein [Oryzias latipes]
 gi|213536445|gb|ACJ51123.1| Nanog [Oryzias latipes]
          Length = 420

 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 10  QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKR---RRDKGDNGIV 61
           Q   L++ +S ++Y   +EM+ LA    LTYKQV+TWF  +R   RR + D   V
Sbjct: 220 QMSTLVQRFSVQRYLAPAEMKNLADVTGLTYKQVKTWFQNRRMKLRRHQKDTSWV 274


>gi|38488708|ref|NP_942108.1| zinc fingers and homeoboxes protein 3 [Danio rerio]
 gi|34420188|gb|AAP51126.1| homeoboxes protein ZHX3 [Danio rerio]
          Length = 1083

 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 30/50 (60%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRR 53
           K + P Q +AL   +++E  PT  E++ L A   +T +++  WF E+RRR
Sbjct: 738 KEREPHQVRALEASFTQEPDPTSEEVDRLRAETKMTRREIHGWFAERRRR 787


>gi|358336974|dbj|GAA55413.1| iroquois-class homeodomain protein irx-3 [Clonorchis sinensis]
          Length = 510

 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 24/167 (14%)

Query: 1   MEVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGI 60
           +  +  T L  K LL+ +    YPTK E   LA A  +   Q+ TWF   RRR K DN +
Sbjct: 168 VPTRETTSLLRKWLLQ-HQLNPYPTKGEKVMLALATRMNLTQISTWFANARRRLKKDNQM 226

Query: 61  V----------IPSSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNK-------HLSLMV 103
                       P+ S K ++G +       +SA ++K+ ++ +  K       H     
Sbjct: 227 TWYPRCRNSQFCPAESYKPIQGNN-----NTLSAMVLKELENKVVYKPIRHIGEHQMDPF 281

Query: 104 CNGTGKKKNAVTVLQDLLTSDYILKKVFRKDGP-PLGVEFDSLPSQA 149
            N +G + N ++   +L   D    + + K  P PL  +  ++P  A
Sbjct: 282 TNASGSEINTLSEASELHHPDGTDTQPYSKGKPNPLVQDVFTMPQSA 328


>gi|432892191|ref|XP_004075698.1| PREDICTED: uncharacterized protein LOC101162386 [Oryzias latipes]
          Length = 928

 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 26/48 (54%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNG 59
            AL + Y   +YPT  E + LA    L+  QV  WF  +R+RD+  +G
Sbjct: 177 NALKECYKSNRYPTPDEKKNLAKVTGLSLTQVSNWFKNRRQRDRTPSG 224


>gi|291190916|ref|NP_001167421.1| Iroquois-class homeodomain protein IRX-1 [Salmo salar]
 gi|223648794|gb|ACN11155.1| Iroquois-class homeodomain protein IRX-1 [Salmo salar]
          Length = 457

 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 122 RETTSTLKAWLQEHQKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 178


>gi|395735619|ref|XP_002815444.2| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-4 [Pongo abelii]
          Length = 541

 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 177 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 235


>gi|344272615|ref|XP_003408127.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Loxodonta
           africana]
          Length = 519

 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 150 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 209

Query: 63  P 63
           P
Sbjct: 210 P 210


>gi|302803574|ref|XP_002983540.1| hypothetical protein SELMODRAFT_118414 [Selaginella moellendorffii]
 gi|300148783|gb|EFJ15441.1| hypothetical protein SELMODRAFT_118414 [Selaginella moellendorffii]
          Length = 505

 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)

Query: 354 FPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHDKDS 413
            PP S   ++P  +  +    E V  L  V+ F   +A  ++I  FTLD+F +A   K+ 
Sbjct: 292 LPPPS---ERPAPSSEFSLPAECVGHLLMVWDFCSAFATSLEITQFTLDDFEEALCSKEE 348

Query: 414 M--LLGKIHVALLKLLLSDVEM 433
              LL ++H ALLK +LS+  +
Sbjct: 349 ECPLLEEVHHALLKAILSNTNL 370


>gi|281339203|gb|EFB14787.1| hypothetical protein PANDA_007419 [Ailuropoda melanoleuca]
          Length = 462

 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 136 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 195

Query: 63  P 63
           P
Sbjct: 196 P 196


>gi|121484129|gb|ABM54407.1| IRX6 [Pan paniscus]
          Length = 225

 Score = 42.0 bits (97), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 28/54 (51%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 140 RETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 193


>gi|148233976|ref|NP_001085658.1| zinc fingers and homeoboxes 3 [Xenopus laevis]
 gi|49257436|gb|AAH73104.1| MGC83579 protein [Xenopus laevis]
          Length = 925

 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 32/55 (58%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           K + P Q +AL K + +  +PT  E+  L +   +T +++ +WF EKR+R   +N
Sbjct: 604 KERAPEQVRALEKSFFQSSFPTVDEVNSLRSETKMTRREIDSWFAEKRKRLAEEN 658


>gi|168007129|ref|XP_001756261.1| ATP-dependent chromatin assembly factor [Physcomitrella patens
           subsp. patens]
 gi|162692771|gb|EDQ79127.1| ATP-dependent chromatin assembly factor [Physcomitrella patens
           subsp. patens]
          Length = 628

 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 788 SIYLGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRG 847
           ++ LG DR +NR+W F            R++ ES +  HW     +E L AL+  L+ +G
Sbjct: 513 TVPLGKDRDHNRFWFF--------NREGRLFVESEDSTHWGYYAGKEELDALIGSLNVKG 564

Query: 848 RQEALLIESLEKREAFLCQAM 868
            +E  L + LE  +  +  A+
Sbjct: 565 IREKALRKQLETYQVKISNAL 585


>gi|157823705|ref|NP_001100800.1| iroquois-class homeodomain protein IRX-4 [Rattus norvegicus]
 gi|149032790|gb|EDL87645.1| Iroquois related homeobox 4 (Drosophila) (predicted) [Rattus
           norvegicus]
          Length = 515

 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 150 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 209

Query: 63  P 63
           P
Sbjct: 210 P 210


>gi|301766924|ref|XP_002918882.1| PREDICTED: iroquois-class homeodomain protein IRX-4-like
           [Ailuropoda melanoleuca]
          Length = 500

 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 171 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 230

Query: 63  P 63
           P
Sbjct: 231 P 231


>gi|125554370|gb|EAY99975.1| hypothetical protein OsI_21979 [Oryza sativa Indica Group]
          Length = 438

 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 2   EVKR--KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           +VKR  KTP Q + L + Y+E+ YP ++    L+  L LT +Q++ WF  +R +D+
Sbjct: 55  KVKRVMKTPYQLEVLERTYTEDPYPNETMRAELSVKLGLTDRQLQMWFCHRRLKDR 110


>gi|358421017|ref|XP_003584799.1| PREDICTED: iroquois-class homeodomain protein IRX-4-like, partial
           [Bos taurus]
          Length = 423

 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 52  RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 110


>gi|307950962|gb|ADN97179.1| A2 mating-type protein [Phanerochaete chrysosporium]
          Length = 463

 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)

Query: 18  YSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK-GDNGIVIPSSSSKKLKGFHGR 76
           +++  YPT+ E E LA   ++ Y+QV  WF  +R R K   +G+       K+   FH  
Sbjct: 171 FAQNAYPTRLEKESLAEITNMEYRQVNVWFQNRRTRSKRSGHGV-------KRGHVFHRV 223

Query: 77  NRLGVVSAK 85
           +R+ +  AK
Sbjct: 224 HRVAMTDAK 232


>gi|194224044|ref|XP_001917484.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 1
           [Equus caballus]
          Length = 517

 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 149 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 207


>gi|449533895|ref|XP_004173906.1| PREDICTED: DDT domain-containing protein DDB_G0282237-like, partial
           [Cucumis sativus]
          Length = 329

 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 8/75 (10%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG DR +NRYW F            R++ ESS+   W    + E L   +  L+ +G +E
Sbjct: 214 LGKDRHHNRYWWFRRDG--------RIFVESSDSKEWGYYSSMEELDTFMGSLNCKGERE 265

Query: 851 ALLIESLEKREAFLC 865
             L + LEK  + +C
Sbjct: 266 RALSKHLEKFYSKIC 280


>gi|431900719|gb|ELK08163.1| Iroquois-class homeodomain protein IRX-4 [Pteropus alecto]
          Length = 524

 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 152 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 211

Query: 63  P 63
           P
Sbjct: 212 P 212


>gi|9256547|ref|NP_061373.1| iroquois-class homeodomain protein IRX-4 [Mus musculus]
 gi|20177969|sp|Q9QY61.1|IRX4_MOUSE RecName: Full=Iroquois-class homeodomain protein IRX-4; AltName:
           Full=Homeodomain protein IRXA3; AltName: Full=Iroquois
           homeobox protein 4
 gi|6689880|gb|AAF23886.1|AF124732_1 iroquois homeobox protein 4 [Mus musculus]
 gi|117558649|gb|AAI26943.1| Iroquois related homeobox 4 (Drosophila) [Mus musculus]
 gi|148705098|gb|EDL37045.1| Iroquois related homeobox 4 (Drosophila) [Mus musculus]
          Length = 515

 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 150 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 209

Query: 63  P 63
           P
Sbjct: 210 P 210


>gi|449485131|ref|XP_002190766.2| PREDICTED: homeobox protein NANOG-like [Taeniopygia guttata]
          Length = 289

 Score = 42.0 bits (97), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 2   EVKRKTPLQAKALLKF---YSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           + K +T    + LL     +  +KY +  ++  LA AL LTYKQV+TWF  +R + K
Sbjct: 100 KTKSRTAFSKEQLLTLHQRFQSQKYLSPQQIRELAVALGLTYKQVKTWFQNRRMKLK 156


>gi|229558899|gb|ACQ76903.1| homeodomain transcription factor Nanog-like protein [Sus scrofa]
          Length = 304

 Score = 42.0 bits (97), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 8/75 (10%)

Query: 18  YSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK--------GDNGIVIPSSSSKK 69
           +  +KY +  +M+ L+  L+L+YKQV+TWF  +R + K         ++  VI  S+S +
Sbjct: 114 FQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQRMKCKRWQKNHWPRNSNSVIQGSASTE 173

Query: 70  LKGFHGRNRLGVVSA 84
             GF+  ++  +V+A
Sbjct: 174 YPGFYSYHQGCLVNA 188


>gi|355758834|gb|EHH61528.1| hypothetical protein EGM_19401, partial [Macaca fascicularis]
          Length = 325

 Score = 42.0 bits (97), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 72  RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 130


>gi|154622684|gb|ABS83566.1| NANOG [Sus scrofa]
          Length = 305

 Score = 42.0 bits (97), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 8/75 (10%)

Query: 18  YSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK--------GDNGIVIPSSSSKK 69
           +  +KY +  +M+ L+  L+L+YKQV+TWF  +R + K         ++  VI  S+S +
Sbjct: 114 FQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQRMKCKRWQKNHWPRNSNSVIQGSASTE 173

Query: 70  LKGFHGRNRLGVVSA 84
             GF+  ++  +V+A
Sbjct: 174 YPGFYSYHQGCLVNA 188


>gi|357155257|ref|XP_003577059.1| PREDICTED: uncharacterized protein LOC100838217 [Brachypodium
           distachyon]
          Length = 1786

 Score = 42.0 bits (97), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 46/256 (17%)

Query: 371 DSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFH-DKDSMLLGKIHVALLKLLLS 429
           D   E++  LF V++FL +++  + +  F LD+F  +      S +L  +HV+LL+ L  
Sbjct: 210 DVPEESIDSLFSVYNFLRSFSVQLFLSPFGLDDFVASIKCTVQSTMLDAVHVSLLRALRR 269

Query: 430 DVEMELGRGCPPHLSVSCKFL--ALLHSVENQEFFVEFWNKSLNPLTWTEILRQVLVAAG 487
            +E +   G   H     K+L  ALL +                 LTW  +L       G
Sbjct: 270 HLEAKASDGS-KHALNCLKYLDWALLDT-----------------LTWPTLLLGYFNLTG 311

Query: 488 FGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFRILLEQGNNGSKVCQLARSSQIAEL 547
                G    +S  ++++ +  Y L P TLK  + +IL          C  A  S+  + 
Sbjct: 312 CVKTLGG---KSFGRKLLAIEYYKL-PVTLKLRVLQIL----------CDHAIDSEELKT 357

Query: 548 NLES---TTEEVELLISSTLSSD-----ITLFEKIASSTYRLRINTSKEADDFESDAEDI 599
            LES     EE E  I  ++ S+     +      AS++ ++  + + E+    ++ E +
Sbjct: 358 ELESREAYNEETEYGIDYSIYSEAGSRSVLTRPSRASASKKIEDSQNLESAPNVTNPEAV 417

Query: 600 ---GSVDDNSDDDDTC 612
               S+D NSDD   C
Sbjct: 418 VANASLDGNSDDCRIC 433


>gi|308220158|gb|ADO22651.1| SIX class homeobox transcription factor SIX13f [Mnemiopsis leidyi]
          Length = 144

 Score = 42.0 bits (97), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)

Query: 13  ALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGI 60
           +L  F+ +  YPT +E   LA + +L+Y Q+  WF  KR R+K  N +
Sbjct: 96  SLTSFFEKNPYPTPAEKRRLATSCELSYVQISNWFKNKRMREKESNRL 143


>gi|194018700|ref|NP_001123443.1| homeobox protein NANOG [Sus scrofa]
 gi|90820134|gb|ABD98822.1| homeodomain transcription factor Nanog [Sus scrofa]
          Length = 304

 Score = 42.0 bits (97), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 8/75 (10%)

Query: 18  YSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK--------GDNGIVIPSSSSKK 69
           +  +KY +  +M+ L+  L+L+YKQV+TWF  +R + K         ++  VI  S+S +
Sbjct: 114 FQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQRMKCKRWQKNHWPRNSNSVIQGSASTE 173

Query: 70  LKGFHGRNRLGVVSA 84
             GF+  ++  +V+A
Sbjct: 174 YPGFYSYHQGCLVNA 188


>gi|74209013|dbj|BAE21235.1| unnamed protein product [Mus musculus]
          Length = 515

 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 150 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 209

Query: 63  P 63
           P
Sbjct: 210 P 210


>gi|7705555|ref|NP_057442.1| iroquois-class homeodomain protein IRX-4 [Homo sapiens]
 gi|12644347|sp|P78413.2|IRX4_HUMAN RecName: Full=Iroquois-class homeodomain protein IRX-4; AltName:
           Full=Homeodomain protein IRXA3; AltName: Full=Iroquois
           homeobox protein 4
 gi|6689882|gb|AAF23887.1|AF124733_1 iroquois homeobox protein 4 [Homo sapiens]
 gi|33356601|gb|AAQ16547.1| homeodomain protein IRXA3 [Homo sapiens]
 gi|119628543|gb|EAX08138.1| iroquois homeobox protein 4, isoform CRA_a [Homo sapiens]
 gi|119628544|gb|EAX08139.1| iroquois homeobox protein 4, isoform CRA_a [Homo sapiens]
 gi|187953259|gb|AAI36506.1| Iroquois homeobox 4 [Homo sapiens]
 gi|223460856|gb|AAI36507.1| Iroquois homeobox 4 [Homo sapiens]
 gi|261858350|dbj|BAI45697.1| iroquois homeobox protein 4 [synthetic construct]
 gi|371501720|dbj|BAL44219.1| iroquois-class homeodomain protein IRX-4 variant 1 [Homo sapiens]
 gi|371501724|dbj|BAL44221.1| iroquois-class homeodomain protein IRX-4 variant 3 [Homo sapiens]
          Length = 519

 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 149 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 208

Query: 63  P 63
           P
Sbjct: 209 P 209


>gi|397473020|ref|XP_003808021.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 3 [Pan
           paniscus]
 gi|397473022|ref|XP_003808022.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 4 [Pan
           paniscus]
          Length = 544

 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 175 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 234

Query: 63  P 63
           P
Sbjct: 235 P 235


>gi|371501722|dbj|BAL44220.1| iroquois-class homeodomain protein IRX-4 variant 2 [Homo sapiens]
 gi|371501726|dbj|BAL44222.1| iroquois-class homeodomain protein IRX-4 variant 4 [Homo sapiens]
          Length = 545

 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 175 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 234

Query: 63  P 63
           P
Sbjct: 235 P 235


>gi|168026109|ref|XP_001765575.1| KNOX class 2 protein MKN6 [Physcomitrella patens subsp. patens]
 gi|162683213|gb|EDQ69625.1| KNOX class 2 protein MKN6 [Physcomitrella patens subsp. patens]
          Length = 518

 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 32/60 (53%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSSKKLK 71
           KA  + +S+  YPT+ E E L     L  KQV  WFI +R+R+   N +V  S    K++
Sbjct: 457 KAWWQAHSKWPYPTEDEKEQLIQETGLELKQVNNWFINQRKRNWHSNPLVSSSDMKNKVR 516


>gi|148540304|ref|NP_001091936.1| iroquois-class homeodomain protein IRX-4 [Bos taurus]
 gi|134025217|gb|AAI34435.1| IRX4 protein [Bos taurus]
 gi|296475647|tpg|DAA17762.1| TPA: iroquois homeobox 4 [Bos taurus]
          Length = 522

 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 151 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 209


>gi|47229508|emb|CAF99496.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 453

 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 123 RETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVT 179


>gi|348534781|ref|XP_003454880.1| PREDICTED: homeobox protein SIX5-like [Oreochromis niloticus]
          Length = 928

 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 26/47 (55%)

Query: 13  ALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNG 59
           AL + Y   +YPT  E + LA    L+  QV  WF  +R+RD+  +G
Sbjct: 178 ALKECYKSNRYPTPDEKKNLAKVTGLSLTQVSNWFKNRRQRDRTPSG 224


>gi|397473016|ref|XP_003808019.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 1 [Pan
           paniscus]
 gi|397473018|ref|XP_003808020.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 2 [Pan
           paniscus]
          Length = 518

 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 149 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 208

Query: 63  P 63
           P
Sbjct: 209 P 209


>gi|402871095|ref|XP_003899521.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 1
           [Papio anubis]
 gi|402871097|ref|XP_003899522.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 2
           [Papio anubis]
 gi|402871099|ref|XP_003899523.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 3
           [Papio anubis]
          Length = 515

 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 147 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 206

Query: 63  P 63
           P
Sbjct: 207 P 207


>gi|410949853|ref|XP_003981631.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-4 [Felis catus]
          Length = 469

 Score = 41.6 bits (96), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 150 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 209

Query: 63  P 63
           P
Sbjct: 210 P 210


>gi|348552648|ref|XP_003462139.1| PREDICTED: iroquois-class homeodomain protein IRX-4-like [Cavia
           porcellus]
          Length = 487

 Score = 41.6 bits (96), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 113 RETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 171


>gi|444732393|gb|ELW72691.1| Iroquois-class homeodomain protein IRX-4 [Tupaia chinensis]
          Length = 509

 Score = 41.6 bits (96), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 147 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 206

Query: 63  P 63
           P
Sbjct: 207 P 207


>gi|84708634|gb|AAI10913.1| Iroquois homeobox 4 [Homo sapiens]
          Length = 519

 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 149 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 208

Query: 63  P 63
           P
Sbjct: 209 P 209


>gi|390338697|ref|XP_781551.3| PREDICTED: homeobox protein SIX1 [Strongylocentrotus purpuratus]
 gi|374534027|gb|AEZ53927.1| Six1 [Strongylocentrotus purpuratus]
          Length = 336

 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 13/84 (15%)

Query: 14  LLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNG-------------I 60
           L ++YS   YP+  E   LA A  LT  QV  WF  +R+RD+                 +
Sbjct: 137 LREWYSHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERENAEQESKTKM 196

Query: 61  VIPSSSSKKLKGFHGRNRLGVVSA 84
             PS+SS++    +G+  LG  ++
Sbjct: 197 ATPSTSSEEDLPMNGKENLGETTS 220


>gi|358339103|dbj|GAA47225.1| homeobox protein cut-like 1 [Clonorchis sinensis]
          Length = 1462

 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 26/47 (55%)

Query: 7    TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRR 53
            TP Q +AL+  ++   YP   ++  LA  LDL YK V  WF  +R R
Sbjct: 1317 TPAQKEALVATFNRHPYPPVDKLRELARQLDLNYKTVLHWFHNRRMR 1363


>gi|311274151|ref|XP_003134213.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Sus scrofa]
          Length = 515

 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 150 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 209

Query: 63  P 63
           P
Sbjct: 210 P 210


>gi|401827859|ref|XP_003888222.1| putative homeodomain-containing transcription factor
           [Encephalitozoon hellem ATCC 50504]
 gi|392999422|gb|AFM99241.1| putative homeodomain-containing transcription factor
           [Encephalitozoon hellem ATCC 50504]
          Length = 151

 Score = 41.6 bits (96), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 29/48 (60%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNG 59
           +AL + +  ++YP+++E   LA    L+ KQ+  WF  KR R KG +G
Sbjct: 100 EALERSFEVDQYPSEAEKARLARVCKLSTKQINNWFTNKRNRSKGHDG 147


>gi|338718731|ref|XP_003363885.1| PREDICTED: iroquois-class homeodomain protein IRX-4 isoform 2
           [Equus caballus]
          Length = 517

 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 147 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 206

Query: 63  P 63
           P
Sbjct: 207 P 207


>gi|109076663|ref|XP_001097842.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Macaca
           mulatta]
          Length = 515

 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 147 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 206

Query: 63  P 63
           P
Sbjct: 207 P 207


>gi|321467889|gb|EFX78877.1| hypothetical protein DAPPUDRAFT_28797 [Daphnia pulex]
          Length = 83

 Score = 41.6 bits (96), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 28/54 (51%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 18 RETTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 71


>gi|197116165|dbj|BAG68831.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
          Length = 686

 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 29/54 (53%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R+T  Q + L  FY E  +PT+ +   L   L++   QV+ WF  KR  +K +N
Sbjct: 46 RRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKINN 99


>gi|9957277|gb|AAG09302.1| homeobox protein [Arabidopsis thaliana]
 gi|13506820|gb|AAK28350.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
 gi|197116135|dbj|BAG68819.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
 gi|197116141|dbj|BAG68822.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
 gi|197116143|dbj|BAG68823.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
 gi|197116147|dbj|BAG68825.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
 gi|197116149|dbj|BAG68826.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
 gi|197116161|dbj|BAG68829.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
          Length = 686

 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 29/54 (53%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R+T  Q + L  FY E  +PT+ +   L   L++   QV+ WF  KR  +K +N
Sbjct: 46 RRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKINN 99


>gi|66472814|ref|NP_001018329.1| iroquois homeobox protein 4b [Danio rerio]
 gi|57164998|gb|AAW34338.1| Iroquois 4b protein [Danio rerio]
          Length = 439

 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 148 RETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 204


>gi|18416569|ref|NP_567722.1| homeobox-leucine zipper protein HDG6 [Arabidopsis thaliana]
 gi|187608874|sp|Q9FVI6.2|FWA_ARATH RecName: Full=Homeobox-leucine zipper protein HDG6; AltName:
          Full=HD-ZIP protein HDG6; AltName: Full=Homeobox
          protein FWA; AltName: Full=Homeodomain GLABRA 2-like
          protein 6; AltName: Full=Homeodomain transcription
          factor HDG6; AltName: Full=Protein HOMEODOMAIN GLABROUS
          6
 gi|197116099|dbj|BAG68818.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
 gi|197116131|dbj|BAG68843.1| homeodomain-containing transcription factor FWA [Arabidopsis
          suecica]
 gi|197116137|dbj|BAG68820.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
 gi|197116145|dbj|BAG68824.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
 gi|197116153|dbj|BAG68828.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
 gi|332659674|gb|AEE85074.1| homeobox-leucine zipper protein HDG6 [Arabidopsis thaliana]
          Length = 686

 Score = 41.6 bits (96), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 29/54 (53%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R+T  Q + L  FY E  +PT+ +   L   L++   QV+ WF  KR  +K +N
Sbjct: 46 RRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKINN 99


>gi|403282284|ref|XP_003932583.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Saimiri
           boliviensis boliviensis]
          Length = 515

 Score = 41.6 bits (96), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 149 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 208

Query: 63  P 63
           P
Sbjct: 209 P 209


>gi|281349025|gb|EFB24609.1| hypothetical protein PANDA_018628 [Ailuropoda melanoleuca]
          Length = 292

 Score = 41.6 bits (96), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 33/68 (48%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPS 64
           R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N +   +
Sbjct: 45  RESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGA 104

Query: 65  SSSKKLKG 72
            S  +  G
Sbjct: 105 RSKDQEDG 112


>gi|7446302|pir||T05794 homeotic protein homolog M7J2.100 - Arabidopsis thaliana
 gi|2980797|emb|CAA18173.1| putative homeodomain-protein [Arabidopsis thaliana]
          Length = 690

 Score = 41.6 bits (96), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 29/54 (53%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R+T  Q + L  FY E  +PT+ +   L   L++   QV+ WF  KR  +K +N
Sbjct: 46 RRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKINN 99


>gi|197116163|dbj|BAG68830.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
          Length = 686

 Score = 41.6 bits (96), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 29/54 (53%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R+T  Q + L  FY E  +PT+ +   L   L++   QV+ WF  KR  +K +N
Sbjct: 46 RRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKINN 99


>gi|197116139|dbj|BAG68821.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
          Length = 686

 Score = 41.6 bits (96), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 29/54 (53%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R+T  Q + L  FY E  +PT+ +   L   L++   QV+ WF  KR  +K +N
Sbjct: 46 RRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKINN 99


>gi|380014099|ref|XP_003691080.1| PREDICTED: homeobox protein araucan-like [Apis florea]
          Length = 382

 Score = 41.6 bits (96), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 230 RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 283


>gi|344278136|ref|XP_003410852.1| PREDICTED: homeobox protein NANOG-like [Loxodonta africana]
          Length = 305

 Score = 41.6 bits (96), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 28/38 (73%)

Query: 18  YSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           + ++KY +  +M+ L+ AL+LTYKQV+TWF  +R + K
Sbjct: 114 FQKQKYLSLQQMQELSEALNLTYKQVKTWFQNQRMKCK 151


>gi|443694681|gb|ELT95759.1| hypothetical protein CAPTEDRAFT_198993 [Capitella teleta]
          Length = 302

 Score = 41.6 bits (96), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           R TP Q  AL K +    YPT+     +A AL L YK V+ WF E+RR+ +
Sbjct: 222 RFTPTQEDALKKVFDVAPYPTRQMKNEMADALKLPYKHVQIWF-ERRRKSE 271


>gi|55742606|ref|NP_001006839.1| zinc fingers and homeoboxes 3 [Xenopus (Silurana) tropicalis]
 gi|50369137|gb|AAH76918.1| zinc fingers and homeoboxes 3 [Xenopus (Silurana) tropicalis]
 gi|89268933|emb|CAJ82286.1| zinc fingers and homeoboxes 3 [Xenopus (Silurana) tropicalis]
          Length = 928

 Score = 41.6 bits (96), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 32/55 (58%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           K + P Q +AL K + +  +PT  E+  L +   +T +++ +WF EKR+R   +N
Sbjct: 604 KERAPEQVRALEKSFFQSSFPTVEEVNRLRSETKMTRREIDSWFAEKRKRVAEEN 658


>gi|197116151|dbj|BAG68827.1| homeodomain-containing transcription factor FWA [Arabidopsis
          thaliana]
          Length = 686

 Score = 41.6 bits (96), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 29/54 (53%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R+T  Q + L  FY E  +PT+ +   L   L++   QV+ WF  KR  +K +N
Sbjct: 46 RRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKINN 99


>gi|124001909|gb|ABM87906.1| IRX6 [Papio hamadryas]
          Length = 123

 Score = 41.6 bits (96), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 28/54 (51%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 38 RETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 91


>gi|145348999|ref|XP_001418928.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579158|gb|ABO97221.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1213

 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG DR    YW   G       G K   +  S  G W V +++EA+ AL+  L ++G +E
Sbjct: 868 LGMDRHLATYWWNFG-------GRKDAVYVQSFSGEWGVYNSQEAVDALVDALCEKGVRE 920

Query: 851 ALLIESLEKREAFLCQAM 868
             L + LEKR+  +  A 
Sbjct: 921 LGLKKQLEKRKVTIADAF 938


>gi|428175718|gb|EKX44606.1| hypothetical protein GUITHDRAFT_139549 [Guillardia theta CCMP2712]
          Length = 1457

 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 135/338 (39%), Gaps = 46/338 (13%)

Query: 773  DAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLG----------PCNEYDPGHKRVYFESS 822
            D K      D  P +S  LG DR Y RYW+F G          P +  +    +  F   
Sbjct: 1003 DQKYKSTLYDRRP-KSECLGCDRFYRRYWVFGGDFSRIWIQSPPASSCEREEFKDLFGDV 1061

Query: 823  EDGH-WEVIDTEEALRALLSVLDDRGRQEALLIESLE-KREAFLCQAMSSGLVNNTEIRH 880
            +  H W  I     L  L+  L+  G +E  LIE+LE  R  FL   MS      +E++ 
Sbjct: 1062 QSEHAWCTISKPHQLEHLIQSLESYGVREHELIENLELYRHDFLSH-MSK---KESEVKA 1117

Query: 881  VAQSDQS-ELDLVREDSSSPVSDVDNNLALSEIGKESLPSCGAIVLDVGKKGEEQHRMWS 939
             A  DQ  E++        P       L   ++G ES+ S  +  L+  ++ E  HR   
Sbjct: 1118 EATGDQKMEVETSNVTEKQPPKRAPRPL---KVGIESIVSNASKFLE-KEQPEGGHRACE 1173

Query: 940  RLQEFDAWIWNSFYLNLNAVKHGKRSYLDALARCERCHDLYWRDEKHCKICHTTFELDF- 998
             +QE             ++++  +  +L  L+R E       R           F +D  
Sbjct: 1174 FVQE-----------AYSSIRSEEVVFLVTLSRIESN----LRFLGQIDAARAYFGIDLP 1218

Query: 999  --DLEERYAVH--AATCRGKGDHLVSKHKILSSQLQSLKAAVHAIESVMPEDALVGAWTK 1054
              D E  +  H  A+ C+ KGD L+ +  +  +++  L+A   A   V+     V +   
Sbjct: 1219 ADDSESDFPRHLPASLCKLKGDLLLIEMAL--NEVFFLQAFTMA--DVLSLQLAVDSEFL 1274

Query: 1055 SAHKLWVKRLRRTSSLAELLQVVADFVSAINEGWLYQW 1092
               K W++ ++      +L++V+   +++I   WL  W
Sbjct: 1275 KMRKEWLQMVKMARCPHDLVEVLRLLITSIKGNWLRPW 1312


>gi|395859481|ref|XP_003802067.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Otolemur
           garnettii]
          Length = 519

 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 149 ATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 208

Query: 63  P 63
           P
Sbjct: 209 P 209


>gi|432884296|ref|XP_004074477.1| PREDICTED: iroquois-class homeodomain protein irx-1-like [Oryzias
           latipes]
          Length = 451

 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 30/59 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 118 ATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVT 176


>gi|348512671|ref|XP_003443866.1| PREDICTED: iroquois-class homeodomain protein irx-4-like
           [Oreochromis niloticus]
          Length = 413

 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 130 RETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVT 186


>gi|341957812|gb|AEL13772.1| Irx1/3, partial [Lethenteron camtschaticum]
          Length = 151

 Score = 41.2 bits (95), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV-IP 63
          R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N +   P
Sbjct: 34 RESTATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWAP 93

Query: 64 SSSSKK 69
           S S +
Sbjct: 94 RSRSDE 99


>gi|195446597|ref|XP_002070839.1| GK25452 [Drosophila willistoni]
 gi|194166924|gb|EDW81825.1| GK25452 [Drosophila willistoni]
          Length = 620

 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 28/56 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 216 ATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 271


>gi|291231307|ref|XP_002735606.1| PREDICTED: sine oculis-related homeobox 4-like [Saccoglossus
           kowalevskii]
          Length = 304

 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 13  ALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKG 56
           AL + Y + +YPT  E   LA    LT  QV  WF  +R+RD+ 
Sbjct: 167 ALKECYKQNRYPTPDEKRNLAKVTGLTLTQVSNWFKNRRQRDRA 210


>gi|449459170|ref|XP_004147319.1| PREDICTED: DDT domain-containing protein DDB_G0282237-like [Cucumis
           sativus]
          Length = 615

 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 8/75 (10%)

Query: 791 LGSDRRYNRYWLFLGPCNEYDPGHKRVYFESSEDGHWEVIDTEEALRALLSVLDDRGRQE 850
           LG DR +NRYW F            R++ ESS+   W    + E L   +  L+ +G +E
Sbjct: 500 LGKDRHHNRYWWF--------RRDGRIFVESSDSKEWGYYSSMEELDTFMGSLNCKGERE 551

Query: 851 ALLIESLEKREAFLC 865
             L + LEK  + +C
Sbjct: 552 RALSKHLEKFYSKIC 566


>gi|440790115|gb|ELR11403.1| homeobox domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 396

 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           KRKTP Q   L K +     P K   E L+  L LT +QV+ WF  KR + K +N + +P
Sbjct: 239 KRKTPEQLALLEKEFETNPMPNKDVREHLSQNLGLTSRQVQIWFQNKRAKVK-NNRVSVP 297

Query: 64  SSS 66
             S
Sbjct: 298 GGS 300


>gi|410911152|ref|XP_003969054.1| PREDICTED: iroquois-class homeodomain protein irx-1-like [Takifugu
           rubripes]
          Length = 443

 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 123 RETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVT 179


>gi|195019738|ref|XP_001985044.1| GH14720 [Drosophila grimshawi]
 gi|193898526|gb|EDV97392.1| GH14720 [Drosophila grimshawi]
          Length = 669

 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 246 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 302


>gi|242023070|ref|XP_002431959.1| Iroquois-class homeodomain protein IRX-1, putative [Pediculus
          humanus corporis]
 gi|212517310|gb|EEB19221.1| Iroquois-class homeodomain protein IRX-1, putative [Pediculus
          humanus corporis]
          Length = 362

 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 29/57 (50%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
          R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 13 RETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 69


>gi|268562407|ref|XP_002646659.1| C. briggsae CBR-NURF-1 protein [Caenorhabditis briggsae]
          Length = 1641

 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 42/164 (25%)

Query: 369 PW-DSSPETVKKL-------------------FKVFHFLCTYAGIVDICSFTLDEFAQAF 408
           PW D  PET+ KL                    +V+  L +Y   + I  FT ++F  A 
Sbjct: 180 PWIDMDPETIPKLDLPESSQDIPLPKHATMDAIEVYEILRSYHRTLRITPFTFEDFCAAL 239

Query: 409 HDKD-SMLLGKIHVALLK-LLLSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFVEFW 466
             K+ S ++ +IH+ALLK  L SD E +       H SV+        +  +    +   
Sbjct: 240 ISKNNSCIMAEIHMALLKSCLKSDDEEQT------HYSVT-------ETNNSANIMIHH- 285

Query: 467 NKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKY 510
              ++ +T+ EILRQ + A  F     SS +++++ E    + Y
Sbjct: 286 ---MDTMTYAEILRQFIEAYPFSD---SSVRDAVNTENYPYVGY 323


>gi|300706508|ref|XP_002995514.1| hypothetical protein NCER_101565 [Nosema ceranae BRL01]
 gi|239604651|gb|EEQ81843.1| hypothetical protein NCER_101565 [Nosema ceranae BRL01]
          Length = 154

 Score = 41.2 bits (95), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 18  YSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           +S+  YPT  E   LA + +LT KQV  WF  KR R+K
Sbjct: 109 FSQNNYPTDFEKARLAKSCNLTIKQVNNWFTNKRNRNK 146


>gi|355757298|gb|EHH60823.1| hypothetical protein EGM_18698 [Macaca fascicularis]
          Length = 224

 Score = 41.2 bits (95), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 31/50 (62%)

Query: 18  YSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSS 67
           +  +KY +  +M+ L+A L+L+YKQV+TWF  +R + K       P +SS
Sbjct: 57  FQRQKYLSLQQMQELSAILNLSYKQVKTWFQNQRMKSKRRQKNNWPKNSS 106


>gi|348512673|ref|XP_003443867.1| PREDICTED: iroquois-class homeodomain protein irx-1-A-like
           [Oreochromis niloticus]
          Length = 462

 Score = 41.2 bits (95), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 30/59 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 121 ATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVT 179


>gi|410949849|ref|XP_003981629.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Felis catus]
          Length = 165

 Score = 41.2 bits (95), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 33/68 (48%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPS 64
           R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N +   +
Sbjct: 48  RESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGA 107

Query: 65  SSSKKLKG 72
            S  +  G
Sbjct: 108 RSKDQEDG 115


>gi|402217195|gb|EJT97276.1| hypothetical protein DACRYDRAFT_25093 [Dacryopinax sp. DJM-731 SS1]
          Length = 569

 Score = 41.2 bits (95), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 30/51 (58%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           R TP Q +AL + Y+   +P+  E   LA  L +  +QV+ WF  +R++DK
Sbjct: 336 RTTPRQFQALTQVYNRTAFPSTQERLQLAERLGMQPRQVQIWFQNRRQQDK 386


>gi|356541435|ref|XP_003539182.1| PREDICTED: uncharacterized protein LOC100796377 [Glycine max]
          Length = 1612

 Score = 41.2 bits (95), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 113/279 (40%), Gaps = 52/279 (18%)

Query: 351 LAKFPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEFAQAFHD 410
           L +FP +S  +  P          E+V  LF V+ FL +++  + +  FTLDEF  A + 
Sbjct: 178 LPEFPSSSGTIGVP---------EESVSLLFAVYGFLRSFSTRLFLMPFTLDEFVGAVNC 228

Query: 411 K-DSMLLGKIHVALLKLL------LSDVEMELGRGCPPHLSVSCKFLALLHSVENQEFFV 463
           +  + +   +HV+L+K+L      LS    E+   C     + C   +LL S        
Sbjct: 229 RVPNSVFDAVHVSLMKVLRRHLESLSSEGSEIASKC-----LGCNDWSLLDS-------- 275

Query: 464 EFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGELFR 523
                    LTW   + Q LV +G  +           KE +   +Y L P + K  + +
Sbjct: 276 ---------LTWPVFVIQYLVVSGHTTAH---EWRGFYKE-VATDEYYLLPVSRKLMILQ 322

Query: 524 ILLEQGNNGSKVCQLARSSQIAELNLESTTEE----------VELLISSTLSSDITLFEK 573
           IL +      ++       + +E+ ++   E+          V+   ++TL+ +     K
Sbjct: 323 ILCDNALESEEIVTEMNIRRESEVGVDYDGEDILPSEVGLRRVQPRYANTLACEDKEATK 382

Query: 574 IASSTYRLRINTSKEADDFESDAEDIGSVDDNSDDDDTC 612
             S++  +    S  +   +++  + G VD N D+   C
Sbjct: 383 FVSASNAVNQPGSSVSYSRDTEGTEDGDVDRNGDECRLC 421


>gi|195378775|ref|XP_002048157.1| GJ11496 [Drosophila virilis]
 gi|194155315|gb|EDW70499.1| GJ11496 [Drosophila virilis]
          Length = 575

 Score = 41.2 bits (95), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 288 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 344


>gi|327286934|ref|XP_003228184.1| PREDICTED: zinc fingers and homeoboxes protein 2-like [Anolis
           carolinensis]
          Length = 799

 Score = 41.2 bits (95), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRR-RDKGDNGIV 61
           K K+P Q K L + + +  +PT+SE+E L +   ++ ++V TWF E+R+ RD  +  ++
Sbjct: 525 KGKSPEQFKILEESFLKSSFPTQSELERLRSEAKMSRREVETWFNERRKLRDNMEQAVL 583


>gi|47155829|gb|AAT11862.1| iroquois-like protein [Tribolium castaneum]
          Length = 242

 Score = 41.2 bits (95), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 93  RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 146


>gi|353232800|emb|CCD80156.1| unnamed protein product [Schistosoma mansoni]
          Length = 1084

 Score = 41.2 bits (95), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPS 64
           R++    K  L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P 
Sbjct: 639 RESTTTLKVWLQEHMKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMSWPP 698

Query: 65  SSSKKLKGFHGRNRLGVVSAK 85
            S   +     ++   + SA+
Sbjct: 699 KSIGSISSIEQKSPTNLNSAQ 719


>gi|195327183|ref|XP_002030301.1| GM25355 [Drosophila sechellia]
 gi|194119244|gb|EDW41287.1| GM25355 [Drosophila sechellia]
          Length = 384

 Score = 41.2 bits (95), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 256 RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 309


>gi|324528411|gb|ADY48911.1| Homeobox protein SIX4 [Ascaris suum]
          Length = 161

 Score = 41.2 bits (95), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 26/52 (50%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           K L +FY   KYPT  + + +A   DL   Q+  WF  +R+RDK       P
Sbjct: 99  KVLRQFYKRNKYPTLEDKKEIARITDLQIIQISNWFKNRRQRDKSSTDRFTP 150


>gi|110339171|gb|ABG67849.1| SIX45-like 1, partial [Nematostella vectensis]
          Length = 60

 Score = 41.2 bits (95), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)

Query: 10 QAKALLK-FYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          +A+A LK  Y + KYPT  E   +A   +LT KQV  WF  +R+RD+
Sbjct: 11 KARAALKDCYEQNKYPTPQEKRLIAKQTNLTLKQVSNWFKNRRQRDR 57


>gi|24663392|ref|NP_524047.2| mirror, isoform A [Drosophila melanogaster]
 gi|24663396|ref|NP_729818.1| mirror, isoform B [Drosophila melanogaster]
 gi|7294553|gb|AAF49894.1| mirror, isoform A [Drosophila melanogaster]
 gi|23093572|gb|AAN11850.1| mirror, isoform B [Drosophila melanogaster]
          Length = 641

 Score = 41.2 bits (95), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 230 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 286


>gi|195589890|ref|XP_002084682.1| GD14396 [Drosophila simulans]
 gi|194196691|gb|EDX10267.1| GD14396 [Drosophila simulans]
          Length = 641

 Score = 41.2 bits (95), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 230 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 286


>gi|125978763|ref|XP_001353414.1| GA10430 [Drosophila pseudoobscura pseudoobscura]
 gi|195160685|ref|XP_002021205.1| GL25205 [Drosophila persimilis]
 gi|54642172|gb|EAL30921.1| GA10430 [Drosophila pseudoobscura pseudoobscura]
 gi|194118318|gb|EDW40361.1| GL25205 [Drosophila persimilis]
          Length = 639

 Score = 41.2 bits (95), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 227 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 283


>gi|195493902|ref|XP_002094612.1| GE21915 [Drosophila yakuba]
 gi|194180713|gb|EDW94324.1| GE21915 [Drosophila yakuba]
          Length = 642

 Score = 41.2 bits (95), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 231 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 287


>gi|432884532|ref|XP_004074483.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like [Oryzias
           latipes]
          Length = 390

 Score = 41.2 bits (95), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 121 RETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVT 177


>gi|198438134|ref|XP_002124771.1| PREDICTED: similar to transcription factor protein [Ciona
           intestinalis]
          Length = 638

 Score = 41.2 bits (95), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV-IPSSSSKK 69
           KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  +P + S +
Sbjct: 85  KAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWVPKNRSNE 143


>gi|194869994|ref|XP_001972564.1| GG15588 [Drosophila erecta]
 gi|190654347|gb|EDV51590.1| GG15588 [Drosophila erecta]
          Length = 641

 Score = 41.2 bits (95), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 230 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 286


>gi|2071997|gb|AAB53640.1| mirror [Drosophila melanogaster]
 gi|3243091|gb|AAC23943.1| homeoprotein Sail [Drosophila melanogaster]
          Length = 641

 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 230 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 286


>gi|390460155|ref|XP_003732428.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           IRX-4 [Callithrix jacchus]
          Length = 520

 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 30/61 (49%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 149 ATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 208

Query: 63  P 63
           P
Sbjct: 209 P 209


>gi|47155922|gb|AAT11875.1| sine oculis-like transcription factor Six4/5 [Cladonema radiatum]
          Length = 214

 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 28/49 (57%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGI 60
           + L ++Y + KYPT  +   LA   +LT  QV  WF  +R+RDK  N I
Sbjct: 159 QMLREWYEKNKYPTPQDKRLLAKRTELTLVQVSNWFKNRRQRDKPQNEI 207


>gi|442632003|ref|NP_001261778.1| mirror, isoform C [Drosophila melanogaster]
 gi|440215710|gb|AGB94471.1| mirror, isoform C [Drosophila melanogaster]
          Length = 682

 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 230 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 286


>gi|157116231|ref|XP_001658393.1| iroquois-class homeodomain protein irx [Aedes aegypti]
 gi|108876562|gb|EAT40787.1| AAEL007505-PA [Aedes aegypti]
          Length = 363

 Score = 40.8 bits (94), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 118 RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 171


>gi|195126379|ref|XP_002007648.1| GI12266 [Drosophila mojavensis]
 gi|193919257|gb|EDW18124.1| GI12266 [Drosophila mojavensis]
          Length = 735

 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 271 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 327


>gi|410911150|ref|XP_003969053.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like
           [Takifugu rubripes]
          Length = 405

 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 30/59 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 124 ATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVT 182


>gi|194747619|ref|XP_001956249.1| GF24692 [Drosophila ananassae]
 gi|190623531|gb|EDV39055.1| GF24692 [Drosophila ananassae]
          Length = 661

 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 241 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 297


>gi|189217774|ref|NP_001121327.1| uncharacterized protein LOC100158416 [Xenopus laevis]
 gi|171847164|gb|AAI61692.1| LOC100158416 protein [Xenopus laevis]
          Length = 928

 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 32/55 (58%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           K + P Q +AL K + +  +PT  E+  L +   +T +++ +WF EKR+R   +N
Sbjct: 607 KERAPEQVRALEKSFFQSSFPTVDEVNRLRSETKMTRREIDSWFAEKRKRLAEEN 661


>gi|426246881|ref|XP_004017216.1| PREDICTED: iroquois-class homeodomain protein IRX-4 [Ovis aries]
          Length = 502

 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 30/59 (50%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 137 RETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 195


>gi|47229510|emb|CAF99498.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 368

 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 30/59 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 123 ATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVT 181


>gi|410909111|ref|XP_003968034.1| PREDICTED: uncharacterized protein LOC101076503 [Takifugu rubripes]
          Length = 388

 Score = 40.8 bits (94), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 10  QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKR---RRDKGDNGIV 61
           Q   L+  +S ++Y   SEM+ LA    LTYKQV+TWF  +R   RR + D+  +
Sbjct: 211 QMNILVHKFSIQRYLPPSEMKNLAEVTGLTYKQVKTWFQNRRMKLRRHQKDSSWI 265


>gi|449329919|gb|AGE96187.1| homeobox domain containing protein [Encephalitozoon cuniculi]
          Length = 157

 Score = 40.8 bits (94), Expect = 4.3,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 1   MEVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNG 59
           ++ +R      +AL + +  ++YP+++E   LA    L+ KQ+  WF  KR R KG  G
Sbjct: 95  IKSRRFPKFITEALERSFEIDQYPSEAEKARLAKICKLSTKQINNWFTNKRNRTKGHEG 153


>gi|391334726|ref|XP_003741752.1| PREDICTED: uncharacterized protein LOC100903505 [Metaseiulus
           occidentalis]
          Length = 477

 Score = 40.8 bits (94), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 29/57 (50%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 185 RETTSTLKAWLNEHRKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKMT 241


>gi|328777967|ref|XP_396291.3| PREDICTED: homeobox protein araucan [Apis mellifera]
          Length = 622

 Score = 40.8 bits (94), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 28/56 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 230 ATRETTSTLKAWLNDHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 285


>gi|19074756|ref|NP_586262.1| homeobox domain [Encephalitozoon cuniculi GB-M1]
 gi|51701488|sp|Q8SUB7.1|HD1_ENCCU RecName: Full=Homeobox protein HD-1; AltName: Full=EcHD-1
 gi|30793768|tpg|DAA01299.1| TPA_exp: homeodomain protein EcHD-1 [Encephalitozoon cuniculi]
 gi|295414041|gb|ADG08178.1| homeodomain protein class 2 [Encephalitozoon cuniculi]
 gi|295414044|gb|ADG08180.1| homeodomain protein class 2 [Encephalitozoon cuniculi]
 gi|295414047|gb|ADG08182.1| homeodomain protein class 2 [Encephalitozoon cuniculi]
          Length = 157

 Score = 40.8 bits (94), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 1   MEVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNG 59
           ++ +R      +AL + +  ++YP+++E   LA    L+ KQ+  WF  KR R KG  G
Sbjct: 95  IKSRRFPKFITEALERSFEIDQYPSEAEKARLAKICKLSTKQINNWFTNKRNRTKGHEG 153


>gi|340716066|ref|XP_003396524.1| PREDICTED: homeobox protein araucan-like [Bombus terrestris]
          Length = 612

 Score = 40.8 bits (94), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 28/56 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 217 ATRETTSTLKAWLNDHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 272


>gi|170027824|ref|XP_001841797.1| iroquois-class homeodomain protein irx [Culex quinquefasciatus]
 gi|167862367|gb|EDS25750.1| iroquois-class homeodomain protein irx [Culex quinquefasciatus]
          Length = 512

 Score = 40.8 bits (94), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 179 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 235


>gi|383860303|ref|XP_003705630.1| PREDICTED: uncharacterized protein LOC100877027 [Megachile
           rotundata]
          Length = 685

 Score = 40.8 bits (94), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 28/54 (51%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 295 RETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 348


>gi|156547431|ref|XP_001604937.1| PREDICTED: hypothetical protein LOC100121331 [Nasonia vitripennis]
          Length = 650

 Score = 40.8 bits (94), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 28/56 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 241 ATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 296


>gi|340372302|ref|XP_003384683.1| PREDICTED: hypothetical protein LOC100635429 [Amphimedon
           queenslandica]
          Length = 470

 Score = 40.8 bits (94), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%)

Query: 7   TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           TP     L K++ +E  P +  +E +A  LDL  ++VR WF  KR++ K  NG V
Sbjct: 356 TPHALSILNKYFLKEPRPNRQIIEMVAEELDLLPEEVRVWFCNKRQKYKTSNGEV 410


>gi|426243526|ref|XP_004015605.1| PREDICTED: iroquois-class homeodomain protein IRX-3 [Ovis aries]
          Length = 429

 Score = 40.8 bits (94), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 27/52 (51%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N +  P
Sbjct: 143 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWP 194


>gi|218196552|gb|EEC78979.1| hypothetical protein OsI_19460 [Oryza sativa Indica Group]
          Length = 208

 Score = 40.8 bits (94), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 31/50 (62%)

Query: 6  KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          KTP Q + L + Y+E+ YP ++    L+  L LT KQ++ WF  +R +D+
Sbjct: 2  KTPYQLEVLKRTYTEDLYPNETIRAELSVKLGLTDKQLQMWFCHRRLKDR 51


>gi|380014060|ref|XP_003691061.1| PREDICTED: homeobox protein araucan-like [Apis florea]
          Length = 620

 Score = 40.8 bits (94), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 28/56 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 230 ATRETTSTLKAWLNDHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 285


>gi|312372586|gb|EFR20515.1| hypothetical protein AND_19965 [Anopheles darlingi]
          Length = 436

 Score = 40.8 bits (94), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 61  NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 117


>gi|170027820|ref|XP_001841795.1| iroquois-class homeodomain protein irx [Culex quinquefasciatus]
 gi|167862365|gb|EDS25748.1| iroquois-class homeodomain protein irx [Culex quinquefasciatus]
          Length = 158

 Score = 40.8 bits (94), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 28 RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 81


>gi|392512889|emb|CAD25866.2| homeobox domain [Encephalitozoon cuniculi GB-M1]
          Length = 151

 Score = 40.8 bits (94), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 1   MEVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNG 59
           ++ +R      +AL + +  ++YP+++E   LA    L+ KQ+  WF  KR R KG  G
Sbjct: 89  IKSRRFPKFITEALERSFEIDQYPSEAEKARLAKICKLSTKQINNWFTNKRNRTKGHEG 147


>gi|389751137|gb|EIM92210.1| hypothetical protein STEHIDRAFT_151548 [Stereum hirsutum FP-91666
           SS1]
          Length = 305

 Score = 40.8 bits (94), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 26/121 (21%), Positives = 55/121 (45%), Gaps = 9/121 (7%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIP 63
           KR +  Q  AL   Y   +YP++ E   LA  +D+ Y  +  WF + RR+        + 
Sbjct: 32  KRPSSSQIGALQTSYDANQYPSREERMALADKIDMPYSAITNWF-QNRRQSSNRKAWTVA 90

Query: 64  SSSSKKLKGFHGRNR--------LGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKKNAVT 115
           + + ++ +      R        L  V++ + ++ +S +H++  SL+    T +K+  ++
Sbjct: 91  ARNKRRTRAKEAAQRPSRMSGLSLDHVASLLERRSNSPVHSRPNSLIPLPLTPQKRRTIS 150

Query: 116 V 116
            
Sbjct: 151 A 151


>gi|221121056|ref|XP_002156969.1| PREDICTED: homeobox protein SIX4 [Hydra magnipapillata]
 gi|144369375|dbj|BAF56231.1| Six-B [Hydra vulgaris]
          Length = 226

 Score = 40.8 bits (94), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK--GDNGIVIPSS 65
           + L  +Y   KYPT  +   LA   +LT  QV  WF  +R+RDK   D+G   PSS
Sbjct: 150 QVLRDWYENNKYPTPQDKRILAKRTELTLVQVSNWFKNRRQRDKPQSDSGDEKPSS 205


>gi|350404409|ref|XP_003487095.1| PREDICTED: hypothetical protein LOC100743699 [Bombus impatiens]
          Length = 768

 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 28/56 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 373 ATRETTSTLKAWLNDHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 428


>gi|284927658|gb|ADC29552.1| iroquois homeodomain protein b [Suberites domuncula]
          Length = 562

 Score = 40.4 bits (93), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 29/49 (59%)

Query: 4  KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRR 52
          KR+ P      +K +S   YPTK+E + LA   ++T +Q++ WFI  RR
Sbjct: 18 KRRNPAVLVLWIKEHSANPYPTKAEKDFLAHDANMTQRQLKDWFINVRR 66


>gi|270004889|gb|EFA01337.1| mirror [Tribolium castaneum]
          Length = 533

 Score = 40.4 bits (93), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 139 ATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 197


>gi|157116233|ref|XP_001658394.1| iroquois-class homeodomain protein irx [Aedes aegypti]
 gi|108876563|gb|EAT40788.1| AAEL007502-PA [Aedes aegypti]
          Length = 540

 Score = 40.4 bits (93), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 28/56 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 206 ATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 261


>gi|332024324|gb|EGI64523.1| Homeobox protein caupolican [Acromyrmex echinatior]
          Length = 625

 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 28/56 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 215 ATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 270


>gi|307177870|gb|EFN66830.1| Homeobox protein araucan [Camponotus floridanus]
          Length = 416

 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 29/57 (50%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
          R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 15 RETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 71


>gi|196015040|ref|XP_002117378.1| hypothetical protein TRIADDRAFT_5673 [Trichoplax adhaerens]
 gi|190580131|gb|EDV20217.1| hypothetical protein TRIADDRAFT_5673 [Trichoplax adhaerens]
          Length = 180

 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 25/45 (55%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKG 56
           K L+++Y    YPT  E   +A A  LT  QV  WF  KR+RD+ 
Sbjct: 136 KMLVEYYQRNPYPTSEEKAIIAEAASLTKVQVSNWFKNKRQRDRA 180


>gi|156353875|ref|XP_001623134.1| predicted protein [Nematostella vectensis]
 gi|156209800|gb|EDO31034.1| predicted protein [Nematostella vectensis]
          Length = 175

 Score = 40.4 bits (93), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 7/57 (12%)

Query: 10  QAKALLK-FYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSS 65
           +A+A LK  Y + KYPT  E   +A   +LT KQV  WF  +R+RD+      IPS+
Sbjct: 123 KARAALKDCYEQNKYPTPQEKRLIAKQTNLTLKQVSNWFKNRRQRDR------IPSN 173


>gi|82621629|gb|ABB86486.1| SIX4/5b-SINE class homeobox protein, partial [Nematostella
          vectensis]
 gi|110339173|gb|ABG67850.1| SIX45-like 2, partial [Nematostella vectensis]
          Length = 60

 Score = 40.4 bits (93), Expect = 5.5,   Method: Composition-based stats.
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 18 YSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
          Y  +KYPT  E   +A   +LT +QVR WF  +R RD+
Sbjct: 20 YEHKKYPTLKEKRVIATQTNLTLRQVRNWFRNRRHRDR 57


>gi|328854117|gb|EGG03251.1| hypothetical protein MELLADRAFT_90260 [Melampsora larici-populina
          98AG31]
          Length = 116

 Score = 40.4 bits (93), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 28/43 (65%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWF 47
          R T  Q K LLK +S ++Y +K EME LA +L +   Q+RTWF
Sbjct: 45 RLTIEQEKVLLKRFSIQEYLSKREMEELAESLKIPTSQLRTWF 87


>gi|284927660|gb|ADC29553.1| iroquois homeodomain protein b [Suberites domuncula]
          Length = 555

 Score = 40.4 bits (93), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 29/49 (59%)

Query: 4  KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRR 52
          KR+ P      +K +S   YPTK+E + LA   ++T +Q++ WFI  RR
Sbjct: 11 KRRNPAVLVLWIKEHSANPYPTKAEKDFLAHDANMTQRQLKDWFINVRR 59


>gi|240960559|ref|XP_002400561.1| Iroquois-class homeobox protein IRX, putative [Ixodes scapularis]
 gi|215490703|gb|EEC00346.1| Iroquois-class homeobox protein IRX, putative [Ixodes scapularis]
          Length = 137

 Score = 40.4 bits (93), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 29/57 (50%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 52  RETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 108


>gi|417410251|gb|JAA51602.1| Putative transcription factor meis1, partial [Desmodus rotundus]
          Length = 381

 Score = 40.4 bits (93), Expect = 5.7,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 30/61 (49%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSSKKLK 71
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N +   + S  +  
Sbjct: 44  KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSKDQED 103

Query: 72  G 72
           G
Sbjct: 104 G 104


>gi|405123288|gb|AFR98053.1| hypothetical protein CNAG_01858 [Cryptococcus neoformans var.
           grubii H99]
          Length = 553

 Score = 40.4 bits (93), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 29/49 (59%)

Query: 7   TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           T LQ   L++ + + K+PT  + E L   + LT +QV+ WF  +R++ +
Sbjct: 134 THLQQAGLMRLWKKTKFPTSGDREALGQEIGLTSRQVQVWFQNQRQKSR 182


>gi|121223344|gb|ABM47727.1| IRX6 [Saguinus labiatus]
          Length = 102

 Score = 40.4 bits (93), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 28/54 (51%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 17 RETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 70


>gi|158293797|ref|XP_315118.4| AGAP005011-PA [Anopheles gambiae str. PEST]
 gi|157016618|gb|EAA10468.4| AGAP005011-PA [Anopheles gambiae str. PEST]
          Length = 575

 Score = 40.4 bits (93), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 217 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 273


>gi|402470869|gb|EJW04906.1| hypothetical protein EDEG_00126 [Edhazardia aedis USNM 41457]
          Length = 149

 Score = 40.4 bits (93), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 14  LLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           L  FY++E+YPT  +   +A A +LT KQV  WF  KR + K
Sbjct: 107 LESFYAKERYPTDQDRINIALACNLTPKQVGYWFTNKRNKYK 148


>gi|348543993|ref|XP_003459466.1| PREDICTED: zinc fingers and homeoboxes protein 2-like [Oreochromis
           niloticus]
          Length = 867

 Score = 40.4 bits (93), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVI 62
           +K KT  Q K L + +    +PT S+++ L+A   L+++++ +WF E+R         ++
Sbjct: 547 MKGKTAKQLKILEENFLRNSFPTHSDVDNLSAITRLSHQEIDSWFAERRALRDNLEQALL 606

Query: 63  PSSSSKKLKGFHGRNRLGVVSAKIVKKQDSL 93
            S  +K++ G    N +G ++ K + +  +L
Sbjct: 607 NSMGTKRMGG----NGIGAITEKQLHQHQAL 633


>gi|343098392|tpg|DAA34946.1| TPA_inf: six-type transcription factor 1/2e [Helobdella robusta]
          Length = 175

 Score = 40.4 bits (93), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 25/44 (56%)

Query: 13  ALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKG 56
            L  +YS   YPT SE   L+A+  LT  QV  WF  +R+RD+ 
Sbjct: 130 TLRDWYSHNPYPTPSEKRQLSASTGLTTTQVSNWFKNRRQRDRA 173


>gi|259013289|ref|NP_001158359.1| iroquois [Saccoglossus kowalevskii]
 gi|32307785|gb|AAP79289.1| iroquois [Saccoglossus kowalevskii]
          Length = 500

 Score = 40.4 bits (93), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 145 ATRETTSTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 203


>gi|348512344|ref|XP_003443703.1| PREDICTED: iroquois-class homeodomain protein irx-1-like
           [Oreochromis niloticus]
          Length = 453

 Score = 40.4 bits (93), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 132 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 181


>gi|195327201|ref|XP_002030310.1| GM25364 [Drosophila sechellia]
 gi|194119253|gb|EDW41296.1| GM25364 [Drosophila sechellia]
          Length = 547

 Score = 40.4 bits (93), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 136 NATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 192


>gi|242016451|ref|XP_002428822.1| Homeobox protein Hox-A7, putative [Pediculus humanus corporis]
 gi|212513534|gb|EEB16084.1| Homeobox protein Hox-A7, putative [Pediculus humanus corporis]
          Length = 164

 Score = 40.4 bits (93), Expect = 6.4,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 42 RESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 95


>gi|355704732|gb|EHH30657.1| hypothetical protein EGK_20410 [Macaca mulatta]
          Length = 299

 Score = 40.4 bits (93), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 27/38 (71%)

Query: 18  YSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           +  +KY +  +M+ L+A L+L+YKQV+TWF  +R + K
Sbjct: 114 FQRQKYLSLQQMQELSAILNLSYKQVKTWFQNQRMKSK 151


>gi|321467888|gb|EFX78876.1| hypothetical protein DAPPUDRAFT_28488 [Daphnia pulex]
          Length = 72

 Score = 40.4 bits (93), Expect = 6.6,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 16 RESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 69


>gi|158293795|ref|XP_315117.4| AGAP005010-PA [Anopheles gambiae str. PEST]
 gi|157016617|gb|EAA10465.4| AGAP005010-PA [Anopheles gambiae str. PEST]
          Length = 782

 Score = 40.4 bits (93), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 212 NATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 268


>gi|12659124|gb|AAK01198.1|AF319963_1 iroquois-related homeobox transcription factor [Gallus gallus]
          Length = 75

 Score = 40.4 bits (93), Expect = 6.6,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 29/56 (51%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGI 60
          R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N +
Sbjct: 15 RESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV 70


>gi|5917660|gb|AAD55977.1| iroquois-related homeobox transcription factor IRX3 [Gallus
          gallus]
          Length = 100

 Score = 40.4 bits (93), Expect = 6.7,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 29 RESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 82


>gi|391334728|ref|XP_003741753.1| PREDICTED: iroquois-class homeodomain protein irx-4-A-like
           [Metaseiulus occidentalis]
          Length = 504

 Score = 40.4 bits (93), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 200 ATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKMT 258


>gi|197282008|gb|ACH57183.1| Six1/2 [Trichoplax adhaerens]
          Length = 60

 Score = 40.4 bits (93), Expect = 6.8,   Method: Composition-based stats.
 Identities = 19/45 (42%), Positives = 25/45 (55%)

Query: 12 KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKG 56
          K L+++Y    YPT  E   +A A  LT  QV  WF  KR+RD+ 
Sbjct: 14 KMLVEYYQRNPYPTSEEKAIIAEAASLTKVQVSNWFKNKRQRDRA 58


>gi|126322642|ref|XP_001381184.1| PREDICTED: zinc fingers and homeoboxes protein 2 [Monodelphis
           domestica]
          Length = 840

 Score = 40.4 bits (93), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRR-RDKGDNGIVI 62
           K KT  Q K L   + +  +PT+ E++ L +   L+ +++ TWF E+R+ RD  +  ++ 
Sbjct: 535 KEKTQGQLKVLEDSFMKSSFPTQGELDRLRSETKLSRREIDTWFSERRKLRDSMEQAVLD 594

Query: 63  PSSSSKKLK 71
              SSKK K
Sbjct: 595 SMGSSKKNK 603


>gi|395512363|ref|XP_003760410.1| PREDICTED: zinc fingers and homeoboxes protein 2 [Sarcophilus
           harrisii]
          Length = 840

 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRR-RDKGDNGIVI 62
           K KT  Q K L   + +  +PT+ E++ L +   L+ +++ TWF E+R+ RD  +  ++ 
Sbjct: 535 KEKTQGQLKVLEDSFMKSSFPTQGELDRLRSETKLSRREIDTWFSERRKLRDSMEQAVLD 594

Query: 63  PSSSSKKLK 71
              SSKK K
Sbjct: 595 SMGSSKKGK 603


>gi|405969201|gb|EKC34186.1| Homeobox protein araucan [Crassostrea gigas]
          Length = 493

 Score = 40.0 bits (92), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 29/60 (48%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
              R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 155 NATRETTNTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 214


>gi|449493910|ref|XP_002189063.2| PREDICTED: iroquois-class homeodomain protein irx-1-A-like
           [Taeniopygia guttata]
          Length = 400

 Score = 40.0 bits (92), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 72  KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 121


>gi|328697559|ref|XP_001952319.2| PREDICTED: hypothetical protein LOC100169212 [Acyrthosiphon pisum]
          Length = 599

 Score = 40.0 bits (92), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 241 ATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 299


>gi|324505955|gb|ADY42550.1| Iroquois-class homeodomain protein irx-1 [Ascaris suum]
          Length = 444

 Score = 40.0 bits (92), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 30/59 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    K+ L  + +  YPTK+E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 137 ATRETTAPLKSWLNEHRKNPYPTKAEKIMLALLTKMTLTQVSTWFANARRRLKKENKMT 195


>gi|322366536|gb|ADW95342.1| IrxA [Paracentrotus lividus]
          Length = 602

 Score = 40.0 bits (92), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 151 ATRETTSTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 209


>gi|270004898|gb|EFA01346.1| sine oculis-related homeobox 4 [Tribolium castaneum]
          Length = 363

 Score = 40.0 bits (92), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 13  ALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSSKKLKG 72
           AL + Y+  +YPT  E   LA    LT  QV  WF  +R+RD+       P    + + G
Sbjct: 265 ALKECYARNRYPTPDEKRALAKRTGLTLTQVSNWFKNRRQRDR------TPQPRPELILG 318

Query: 73  FHGRNRLGVVSA 84
               N+ G++SA
Sbjct: 319 NMSLNQSGMMSA 330


>gi|118343846|ref|NP_001071747.1| transcription factor protein [Ciona intestinalis]
 gi|70570009|dbj|BAE06520.1| transcription factor protein [Ciona intestinalis]
          Length = 570

 Score = 40.0 bits (92), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 102 ATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 160


>gi|193788691|ref|NP_001123285.1| iroquois homeobox A [Strongylocentrotus purpuratus]
 gi|167859058|gb|ACA04464.1| IrxA [Strongylocentrotus purpuratus]
          Length = 605

 Score = 40.0 bits (92), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 149 ATRETTSTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 207


>gi|2765440|emb|CAA75234.1| Iroquois homeobox protein 1 [Mus musculus]
          Length = 74

 Score = 40.0 bits (92), Expect = 7.4,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 29/56 (51%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGI 60
          R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N +
Sbjct: 12 RESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV 67


>gi|320170617|gb|EFW47516.1| pre-B-cell leukemia transcription factor 3D [Capsaspora owczarzaki
           ATCC 30864]
          Length = 212

 Score = 40.0 bits (92), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 20  EEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGD 57
           E  YP++SE E LA   +LT +Q+ TWF  KR R   D
Sbjct: 175 EHPYPSESEKEQLADQTNLTMRQISTWFANKRNRQAQD 212


>gi|449278630|gb|EMC86431.1| Zinc fingers and homeoboxes protein 2, partial [Columba livia]
          Length = 683

 Score = 40.0 bits (92), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 16/147 (10%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRR-RDKGDNGIVI 62
           K KT  Q +AL + +    +PT+ E++ L     L+ +++ +WF E+R+ RD  +  ++ 
Sbjct: 527 KEKTQEQLRALEESFLRCSFPTQGELDRLRVETKLSRREIDSWFSERRKIRDSMEQAVLD 586

Query: 63  PSSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKKNAVTVLQDLLT 122
              S +K+K     N  G +S      Q  L+ +  L        G    + T  +    
Sbjct: 587 SMGSYRKIKEQGTPN--GAIS------QAELLSSSQLP-------GALSGSSTTFKKTQE 631

Query: 123 SDYILKKVFRKDGPPLGVEFDSLPSQA 149
             ++LK  F +   P   E+D L SQ 
Sbjct: 632 QIHLLKSTFARTQWPSPQEYDQLASQT 658


>gi|449272569|gb|EMC82431.1| Iroquois-class homeodomain protein irx-1-A, partial [Columba livia]
          Length = 381

 Score = 40.0 bits (92), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 51  KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 100


>gi|432908324|ref|XP_004077811.1| PREDICTED: iroquois-class homeodomain protein irx-1-like [Oryzias
           latipes]
          Length = 498

 Score = 40.0 bits (92), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 130 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 179


>gi|355756778|gb|EHH60386.1| hypothetical protein EGM_11738, partial [Macaca fascicularis]
          Length = 138

 Score = 40.0 bits (92), Expect = 7.6,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
          R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 25 RESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 78


>gi|124054398|gb|ABM89425.1| IRX6 [Pongo pygmaeus]
          Length = 307

 Score = 40.0 bits (92), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 29/57 (50%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
          R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 17 RETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 73


>gi|379645233|gb|AFD04440.1| Yhp2 [Cryptococcus neoformans var. grubii]
          Length = 754

 Score = 40.0 bits (92), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 29/49 (59%)

Query: 7   TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           T LQ   L++ + + K+PT  + E L   + LT +QV+ WF  +R++ +
Sbjct: 335 THLQQAGLMRLWKKTKFPTSGDREALGQEIGLTSRQVQVWFQNQRQKSR 383


>gi|56201850|dbj|BAD73300.1| homeobox transcription factor-like [Oryza sativa Japonica Group]
 gi|56202087|dbj|BAD73616.1| homeobox transcription factor-like [Oryza sativa Japonica Group]
 gi|125527213|gb|EAY75327.1| hypothetical protein OsI_03219 [Oryza sativa Indica Group]
          Length = 244

 Score = 40.0 bits (92), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 2/55 (3%)

Query: 3   VKR--KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           VKR  K+P Q + L K Y+ E+YP+++    L+A + L+ +Q++ WF  +R +D+
Sbjct: 48  VKRMMKSPYQLEVLEKTYAVEQYPSETLRAELSAKIGLSDRQLQMWFCHRRLKDR 102


>gi|332376553|gb|AEE63416.1| unknown [Dendroctonus ponderosae]
          Length = 360

 Score = 40.0 bits (92), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 13  ALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNG----IVIPSSSSK 68
           AL + Y+  +YPT  E + L+    LT  QV  WF  +R+RD+        I+   S S+
Sbjct: 262 ALKECYARNRYPTPDEKKALSKRTGLTLTQVSNWFKNRRQRDRTPQSRPDIILGNMSLSQ 321

Query: 69  KLKGFHGRNRLGVVSAKIVKK 89
              G H +N L +V+ +   K
Sbjct: 322 GGLGNHHQNNLDMVAFQAASK 342


>gi|296231094|ref|XP_002761004.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Callithrix
           jacchus]
          Length = 499

 Score = 40.0 bits (92), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV- 61
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N +  
Sbjct: 153 ATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW 212

Query: 62  IPSSSSKKLKGFHGR--NRLGVVSA 84
            P +   + +   GR  + LG ++A
Sbjct: 213 APKNKGGEERKAEGREEDSLGCLNA 237


>gi|66812246|ref|XP_640302.1| DDT domain-containing protein [Dictyostelium discoideum AX4]
 gi|74855116|sp|Q54ST3.1|Y2237_DICDI RecName: Full=DDT domain-containing protein DDB_G0282237
 gi|60468316|gb|EAL66324.1| DDT domain-containing protein [Dictyostelium discoideum AX4]
          Length = 885

 Score = 40.0 bits (92), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 15/97 (15%)

Query: 773 DAKATEVSTDLHPMQSIYLGSDRRYNRYWLFLG-PCNEYDPGHKRVYFESSEDGHWEVID 831
           D K  + ST L       LG DR Y  YW +   P         ++Y E+ E+G WE   
Sbjct: 764 DEKLEKYSTRLES-----LGRDRNYRNYWYWYQLPS--------KIYVEN-ENGGWEYYS 809

Query: 832 TEEALRALLSVLDDRGRQEALLIESLEKREAFLCQAM 868
           +++ L  L+  LD+RG +E  L+ +++ +  F+   +
Sbjct: 810 SKKELDDLIKYLDNRGIRERKLLFNIKPKYDFIVSQL 846


>gi|355710199|gb|EHH31663.1| hypothetical protein EGK_12782, partial [Macaca mulatta]
          Length = 157

 Score = 40.0 bits (92), Expect = 7.9,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 47  RESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 100


>gi|125571531|gb|EAZ13046.1| hypothetical protein OsJ_02964 [Oryza sativa Japonica Group]
          Length = 244

 Score = 40.0 bits (92), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 2/55 (3%)

Query: 3   VKR--KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           VKR  K+P Q + L K Y+ E+YP+++    L+A + L+ +Q++ WF  +R +D+
Sbjct: 48  VKRMMKSPYQLEVLEKTYAVEQYPSETLRAELSAKIGLSDRQLQMWFCHRRLKDR 102


>gi|255572213|ref|XP_002527046.1| hypothetical protein RCOM_0834050 [Ricinus communis]
 gi|223533608|gb|EEF35346.1| hypothetical protein RCOM_0834050 [Ricinus communis]
          Length = 643

 Score = 40.0 bits (92), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 17/67 (25%)

Query: 6   KTPLQAKALLKFYS-----------------EEKYPTKSEMEGLAAALDLTYKQVRTWFI 48
           KTP Q  AL KFY+                 E  YPT+     +A  + LT KQV +WF 
Sbjct: 40  KTPAQIMALEKFYNVMLVIMFLKGKFLAFSPEHNYPTEEMKSEVAEKIGLTEKQVSSWFC 99

Query: 49  EKRRRDK 55
            +R +DK
Sbjct: 100 HRRLKDK 106


>gi|295798062|emb|CBL87028.1| six4 protein [Tribolium castaneum]
          Length = 319

 Score = 40.0 bits (92), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 13  ALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSSKKLKG 72
           AL + Y+  +YPT  E   LA    LT  QV  WF  +R+RD+       P    + + G
Sbjct: 221 ALKECYARNRYPTPDEKRALAKRTGLTLTQVSNWFKNRRQRDR------TPQPRPELILG 274

Query: 73  FHGRNRLGVVSA 84
               N+ G++SA
Sbjct: 275 NMSLNQSGMMSA 286


>gi|263432223|sp|O42261.2|IRX3_XENLA RecName: Full=Iroquois-class homeodomain protein irx-3; AltName:
           Full=Iroquois homeobox protein 3; Short=Xiro3
 gi|80479311|gb|AAI08596.1| Xiro3 protein [Xenopus laevis]
          Length = 448

 Score = 40.0 bits (92), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 124 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 173


>gi|358253316|dbj|GAA52801.1| iroquois-class homeodomain protein IRX-6 [Clonorchis sinensis]
          Length = 915

 Score = 40.0 bits (92), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 30/59 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R++    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 345 ATRESTATLKAWLQEHIKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 403


>gi|291412609|ref|XP_002722571.1| PREDICTED: iroquois homeobox protein 1 [Oryctolagus cuniculus]
          Length = 418

 Score = 40.0 bits (92), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 30/61 (49%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSSKKLK 71
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N +   S S  +  
Sbjct: 81  KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGSRSKDQED 140

Query: 72  G 72
           G
Sbjct: 141 G 141


>gi|195454705|ref|XP_002074363.1| GK10560 [Drosophila willistoni]
 gi|194170448|gb|EDW85349.1| GK10560 [Drosophila willistoni]
          Length = 736

 Score = 40.0 bits (92), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 28/56 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 236 ATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 291


>gi|148228579|ref|NP_001084204.1| iroquois-class homeodomain protein irx-3 [Xenopus laevis]
 gi|2598958|gb|AAB84027.1| homeobox transcription factor iriquois 3 [Xenopus laevis]
          Length = 448

 Score = 40.0 bits (92), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 124 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 173


>gi|345796330|ref|XP_003434155.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Canis lupus
           familiaris]
          Length = 650

 Score = 40.0 bits (92), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 318 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 367


>gi|348583559|ref|XP_003477540.1| PREDICTED: iroquois-class homeodomain protein IRX-6-like [Cavia
           porcellus]
          Length = 456

 Score = 40.0 bits (92), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 28/56 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 153 ATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 208


>gi|120975024|gb|ABM46807.1| IRX6 [Gorilla gorilla]
          Length = 306

 Score = 40.0 bits (92), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 29/57 (50%)

Query: 5  RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
          R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 17 RETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 73


>gi|356544359|ref|XP_003540620.1| PREDICTED: uncharacterized protein LOC100791832 [Glycine max]
          Length = 1702

 Score = 40.0 bits (92), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 37/184 (20%)

Query: 347 CRDLLAK--FPPNSVKMKQPFGTQPWDSSPETVKKLFKVFHFLCTYAGIVDICSFTLDEF 404
           C D L K  FPP+S  +         D  P  V +LF ++  L +++ ++ +  F L++ 
Sbjct: 460 CSDPLPKLQFPPSSTNLN-------LDGVP--VLELFSIYACLRSFSTLLFLSPFELEDL 510

Query: 405 AQAFHDK-DSMLLGKIHVALLKLLLSDVEMELGRGCPPHLSVSCKFLALLHSVEN--QEF 461
             A   +  S+L   IHV++L+ L  ++E     GC               S  N  +  
Sbjct: 511 VAALKSEIPSILFDSIHVSILQTLRKNLEYLSNEGC--------------QSASNCLRNL 556

Query: 462 FVEFWNKSLNPLTWTEILRQVLVAAGFGSKQGSSRKESLSKEMILMLKYGLRPGTLKGEL 521
             +F    L+ +TW   + + L+  G G K G        K ++    Y  +P T K E+
Sbjct: 557 SWDF----LDLVTWPIFMAEYLLIHGSGFKTGFDL-----KHLMFKTDYYKQPVTAKVEI 607

Query: 522 FRIL 525
            + L
Sbjct: 608 LQYL 611


>gi|74054137|gb|AAZ95458.1| caupolican-like protein [Calliphora vicina]
          Length = 626

 Score = 39.7 bits (91), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 29/60 (48%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
              R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 276 NATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 335


>gi|340718764|ref|XP_003397833.1| PREDICTED: h2.0-like homeobox protein-like [Bombus terrestris]
          Length = 234

 Score = 39.7 bits (91), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 9   LQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKR---RRDKGDNGIVIPSS 65
           LQ K L + +S +KY TK +   LAA L LT  QV+ WF  +R   R  K      + +S
Sbjct: 138 LQRKGLERRFSLQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRHTKESENTALSNS 197

Query: 66  SSKK 69
            S+K
Sbjct: 198 DSQK 201


>gi|297698742|ref|XP_002826472.1| PREDICTED: uncharacterized protein LOC100448844 [Pongo abelii]
          Length = 440

 Score = 39.7 bits (91), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV-IPSSSSKKL 70
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N +   P S + + 
Sbjct: 143 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDEE 202

Query: 71  KGFHGRNR 78
              +G  R
Sbjct: 203 GNAYGSER 210


>gi|91079702|ref|XP_968740.1| PREDICTED: similar to AGAP011067-PA, partial [Tribolium castaneum]
          Length = 223

 Score = 39.7 bits (91), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 13  ALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSSSKKLKG 72
           AL + Y+  +YPT  E   LA    LT  QV  WF  +R+RD+       P    + + G
Sbjct: 125 ALKECYARNRYPTPDEKRALAKRTGLTLTQVSNWFKNRRQRDR------TPQPRPELILG 178

Query: 73  FHGRNRLGVVSA 84
               N+ G++SA
Sbjct: 179 NMSLNQSGMMSA 190


>gi|46395476|ref|NP_997067.1| iroquois-class homeodomain protein IRX-1 isoform 1 [Danio rerio]
 gi|14582906|gb|AAK69709.1| iroquois homeobox protein Ziro1 [Danio rerio]
          Length = 426

 Score = 39.7 bits (91), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 130 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 179


>gi|46395472|ref|NP_997068.1| iroquois-class homeodomain protein IRX-1 isoform 2 [Danio rerio]
 gi|21654891|gb|AAK91828.1| iroquois homeobox protein ziro1-a [Danio rerio]
          Length = 419

 Score = 39.7 bits (91), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 130 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 179


>gi|351709280|gb|EHB12199.1| Iroquois-class homeodomain protein IRX-6 [Heterocephalus glaber]
          Length = 460

 Score = 39.7 bits (91), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 164 ATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 222


>gi|195019751|ref|XP_001985047.1| GH14716 [Drosophila grimshawi]
 gi|193898529|gb|EDV97395.1| GH14716 [Drosophila grimshawi]
          Length = 733

 Score = 39.7 bits (91), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 243 RESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 296


>gi|194869983|ref|XP_001972562.1| GG15585 [Drosophila erecta]
 gi|190654345|gb|EDV51588.1| GG15585 [Drosophila erecta]
          Length = 813

 Score = 39.7 bits (91), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 28/56 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 354 ATRESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 409


>gi|190340076|gb|AAI63896.1| Iroquois homeobox protein 1, a [Danio rerio]
          Length = 426

 Score = 39.7 bits (91), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 130 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 179


>gi|91079258|ref|XP_971676.1| PREDICTED: similar to iroquois-class homeodomain protein irx
           [Tribolium castaneum]
          Length = 458

 Score = 39.7 bits (91), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 168 ATRETTSTLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 226


>gi|395510790|ref|XP_003759653.1| PREDICTED: iroquois-class homeodomain protein irx-1-A-like
           [Sarcophilus harrisii]
          Length = 422

 Score = 39.7 bits (91), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 92  KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 141


>gi|395505973|ref|XP_003757310.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Sarcophilus
           harrisii]
          Length = 526

 Score = 39.7 bits (91), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 161 ATRETTSTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 219


>gi|56694850|gb|AAW23087.1| Irx-c [Oikopleura dioica]
          Length = 318

 Score = 39.7 bits (91), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R++    K  LK + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 152 RESTAPLKNWLKEHQKNPYPTKGEKVYLALISGMTLTQVSTWFANARRRLKKEN 205


>gi|50732012|ref|XP_418458.1| PREDICTED: zinc fingers and homeoboxes protein 2 [Gallus gallus]
          Length = 830

 Score = 39.7 bits (91), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 16/146 (10%)

Query: 4   KRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRR-RDKGDNGIVI 62
           K K+  Q +AL + +    +PT+ E++ L     L+ +++ +WF E+R+ RD  +  ++ 
Sbjct: 532 KEKSQEQLRALEESFLRCSFPTQGELDRLRVETKLSRREIDSWFSERRKIRDSMEQAVLD 591

Query: 63  PSSSSKKLKGFHGRNRLGVVSAKIVKKQDSLIHNKHLSLMVCNGTGKKKNAVTVLQDLLT 122
              S +K+K     N  G +S      Q  L+++  L        G    +   L+    
Sbjct: 592 SMGSYRKIKEQGTPN--GAIS------QAELMNSSQLP-------GALSGSSATLKKTQE 636

Query: 123 SDYILKKVFRKDGPPLGVEFDSLPSQ 148
             ++LK  F +   P   E+D L SQ
Sbjct: 637 QIHLLKSTFARTQWPTPQEYDQLASQ 662


>gi|405965487|gb|EKC30856.1| Homeobox protein caupolican [Crassostrea gigas]
          Length = 485

 Score = 39.7 bits (91), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 29/57 (50%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 150 RETTNTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 206


>gi|345316136|ref|XP_001515380.2| PREDICTED: hypothetical protein LOC100084976 [Ornithorhynchus
           anatinus]
          Length = 407

 Score = 39.7 bits (91), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 29/54 (53%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R+T    KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 103 RETTATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 156


>gi|344289363|ref|XP_003416413.1| PREDICTED: iroquois-class homeodomain protein IRX-6 [Loxodonta
           africana]
          Length = 491

 Score = 39.7 bits (91), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 28/56 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 153 ATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 208


>gi|270004888|gb|EFA01336.1| iroquois-like protein [Tribolium castaneum]
          Length = 547

 Score = 39.7 bits (91), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 25/47 (53%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 273 KAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 319


>gi|327281224|ref|XP_003225349.1| PREDICTED: LOW QUALITY PROTEIN: iroquois-class homeodomain protein
           irx-1-like [Anolis carolinensis]
          Length = 475

 Score = 39.7 bits (91), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 155 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 204


>gi|431914130|gb|ELK15389.1| Iroquois-class homeodomain protein IRX-6 [Pteropus alecto]
          Length = 513

 Score = 39.7 bits (91), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 28/56 (50%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 153 ATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 208


>gi|8547319|gb|AAF76327.1|AF261146_1 homeoprotein [Branchiostoma floridae]
          Length = 289

 Score = 39.7 bits (91), Expect = 9.5,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 38/86 (44%)

Query: 7   TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIVIPSSS 66
           TP Q   L   + +  Y    E + LA  L L+  QV+ WF  +R + K D        S
Sbjct: 190 TPTQLLRLEHAFEKNHYVVGQERKQLAQQLTLSETQVKVWFQNRRTKYKRDQQEDEGRKS 249

Query: 67  SKKLKGFHGRNRLGVVSAKIVKKQDS 92
             +LKG H  NR    + + V+ Q S
Sbjct: 250 PPRLKGAHHVNRWREATREFVQFQSS 275


>gi|354498623|ref|XP_003511414.1| PREDICTED: iroquois-class homeodomain protein IRX-1 [Cricetulus
           griseus]
          Length = 411

 Score = 39.7 bits (91), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 74  KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 123


>gi|444725601|gb|ELW66162.1| Iroquois-class homeodomain protein IRX-6 [Tupaia chinensis]
          Length = 465

 Score = 39.7 bits (91), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 28/54 (51%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 125 RETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 178


>gi|118343852|ref|NP_001071748.1| transcription factor protein [Ciona intestinalis]
 gi|70570014|dbj|BAE06521.1| transcription factor protein [Ciona intestinalis]
          Length = 697

 Score = 39.7 bits (91), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV-IPSSSSKK 69
           KA L+ + +  YPTK E   LA    +T  QV TWF   RRR K +N +  +P + S +
Sbjct: 122 KAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWVPKNRSNE 180


>gi|344289367|ref|XP_003416415.1| PREDICTED: iroquois-class homeodomain protein IRX-3-like [Loxodonta
           africana]
          Length = 507

 Score = 39.7 bits (91), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 143 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 192


>gi|334311808|ref|XP_001372954.2| PREDICTED: iroquois-class homeodomain protein IRX-6-like
           [Monodelphis domestica]
          Length = 498

 Score = 39.7 bits (91), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%)

Query: 3   VKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
             R+T    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 161 ATRETTSTLKAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 219


>gi|195454701|ref|XP_002074361.1| GK10562 [Drosophila willistoni]
 gi|194170446|gb|EDW85347.1| GK10562 [Drosophila willistoni]
          Length = 661

 Score = 39.7 bits (91), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 28/54 (51%)

Query: 5   RKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 242 RESTATLKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 295


>gi|195378783|ref|XP_002048161.1| GJ11492 [Drosophila virilis]
 gi|194155319|gb|EDW70503.1| GJ11492 [Drosophila virilis]
          Length = 756

 Score = 39.7 bits (91), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 28/57 (49%)

Query: 2   EVKRKTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
              R++    KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 254 NATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 310


>gi|147907128|ref|NP_001090157.1| iroquois-class homeodomain protein irx-1-B [Xenopus laevis]
 gi|123907624|sp|Q2TAQ8.1|IRX1B_XENLA RecName: Full=Iroquois-class homeodomain protein irx-1-B; AltName:
           Full=Iroquois homeobox protein 1-B
 gi|83405812|gb|AAI10768.1| MGC131109 protein [Xenopus laevis]
          Length = 462

 Score = 39.7 bits (91), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 137 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 186


>gi|194224041|ref|XP_001917663.1| PREDICTED: iroquois-class homeodomain protein IRX-1-like [Equus
           caballus]
          Length = 443

 Score = 39.7 bits (91), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 105 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 154


>gi|195019756|ref|XP_001985048.1| GH14715 [Drosophila grimshawi]
 gi|193898530|gb|EDV97396.1| GH14715 [Drosophila grimshawi]
          Length = 791

 Score = 39.7 bits (91), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 25/47 (53%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDN 58
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N
Sbjct: 261 KAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN 307


>gi|319738603|ref|NP_001188351.1| iroquois-class homeodomain protein irx-1 [Xenopus (Silurana)
           tropicalis]
 gi|82086070|sp|Q6F2E3.1|IRX1_XENTR RecName: Full=Iroquois-class homeodomain protein irx-1; AltName:
           Full=Iroquois homeobox protein 1
 gi|50253602|gb|AAT72003.1| iro1 [Xenopus (Silurana) tropicalis]
          Length = 467

 Score = 39.7 bits (91), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 142 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVT 191


>gi|149032687|gb|EDL87557.1| Iroquois related homeobox 3 (Drosophila) (predicted), isoform CRA_a
           [Rattus norvegicus]
          Length = 507

 Score = 39.7 bits (91), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 26/50 (52%)

Query: 12  KALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDKGDNGIV 61
           KA L  + +  YPTK E   LA    +T  QV TWF   RRR K +N + 
Sbjct: 146 KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMT 195


>gi|395541126|ref|XP_003772498.1| PREDICTED: homeobox protein NANOG [Sarcophilus harrisii]
          Length = 311

 Score = 39.7 bits (91), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/46 (39%), Positives = 28/46 (60%)

Query: 10  QAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           Q   L   + E+KY +  ++  +A  L+LTYKQV+TWF  +R + K
Sbjct: 116 QLNVLNSRFLEQKYLSPQQIRNVAENLNLTYKQVKTWFQNQRMKSK 161


>gi|284431782|gb|ADB84632.1| homeobox protein [Oryza sativa Japonica Group]
          Length = 268

 Score = 39.7 bits (91), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 2/55 (3%)

Query: 3   VKR--KTPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55
           VKR  K+P Q + L K Y+ E+YP+++    L+A + L+ +Q++ WF  +R +D+
Sbjct: 48  VKRMMKSPYQLEVLEKTYAVEQYPSETLRAELSAKIGLSDRQLQMWFCHRRLKDR 102


>gi|350405066|ref|XP_003487313.1| PREDICTED: H2.0-like homeobox protein-like [Bombus impatiens]
          Length = 234

 Score = 39.7 bits (91), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 9   LQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKR---RRDKGDNGIVIPSS 65
           LQ K L + +S +KY TK +   LAA L LT  QV+ WF  +R   R  K      + +S
Sbjct: 138 LQRKGLERRFSLQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRHTKESENTALSNS 197

Query: 66  SSKK 69
            S+K
Sbjct: 198 DSQK 201


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.133    0.393 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,173,394,485
Number of Sequences: 23463169
Number of extensions: 772503273
Number of successful extensions: 2495808
Number of sequences better than 100.0: 735
Number of HSP's better than 100.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 2493575
Number of HSP's gapped (non-prelim): 1680
length of query: 1159
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 1005
effective length of database: 8,745,867,341
effective search space: 8789596677705
effective search space used: 8789596677705
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 83 (36.6 bits)