Query 001087
Match_columns 1159
No_of_seqs 467 out of 3103
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 15:28:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001087.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001087hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0206 P-type ATPase [General 100.0 4E-222 9E-227 2021.2 59.5 1038 2-1077 44-1091(1151)
2 PLN03190 aminophospholipid tra 100.0 5E-193 1E-197 1833.5 99.9 1036 2-1077 99-1156(1178)
3 TIGR01652 ATPase-Plipid phosph 100.0 3E-179 6E-184 1729.7 101.2 1035 2-1073 13-1057(1057)
4 KOG0210 P-type ATPase [Inorgan 100.0 6E-160 1E-164 1338.3 59.4 949 2-1072 91-1050(1051)
5 COG0474 MgtA Cation transport 100.0 4E-118 9E-123 1132.1 66.2 803 4-1047 69-899 (917)
6 KOG0202 Ca2+ transporting ATPa 100.0 3E-112 6E-117 982.8 44.7 862 8-1064 47-970 (972)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 1E-108 3E-113 1053.7 75.5 875 13-1063 58-1048(1053)
8 TIGR01116 ATPase-IIA1_Ca sarco 100.0 3E-108 5E-113 1049.6 77.0 860 13-1061 6-917 (917)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 6E-107 1E-111 1042.9 74.8 845 13-1063 71-986 (997)
10 KOG0204 Calcium transporting A 100.0 3E-108 6E-113 947.7 45.1 819 9-1059 148-1005(1034)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 1E-104 2E-109 1020.5 74.7 804 13-1059 95-938 (941)
12 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2.6E-99 6E-104 964.8 75.8 791 17-1063 64-883 (884)
13 TIGR01657 P-ATPase-V P-type AT 100.0 4.3E-97 9E-102 958.2 78.2 733 36-948 193-952 (1054)
14 PRK15122 magnesium-transportin 100.0 7.2E-95 1.6E-99 918.3 71.1 779 13-1058 80-893 (903)
15 PRK10517 magnesium-transportin 100.0 1E-94 2.2E-99 915.3 69.3 754 13-1048 99-885 (902)
16 TIGR01524 ATPase-IIIB_Mg magne 100.0 2.5E-93 5.4E-98 904.0 70.1 751 13-1048 65-850 (867)
17 TIGR01647 ATPase-IIIA_H plasma 100.0 6.2E-89 1.3E-93 853.6 67.0 676 13-984 35-721 (755)
18 KOG0203 Na+/K+ ATPase, alpha s 100.0 3.4E-89 7.4E-94 788.5 27.1 852 7-1063 83-1008(1019)
19 KOG0208 Cation transport ATPas 100.0 2.9E-84 6.4E-89 758.6 58.2 785 13-948 191-1003(1140)
20 PRK14010 potassium-transportin 100.0 1.6E-75 3.4E-80 707.5 51.5 548 7-872 26-594 (673)
21 PRK01122 potassium-transportin 100.0 5.6E-74 1.2E-78 694.6 55.6 505 43-861 72-587 (679)
22 TIGR01497 kdpB K+-transporting 100.0 1.9E-70 4.1E-75 662.2 52.9 510 46-868 76-595 (675)
23 KOG0209 P-type ATPase [Inorgan 100.0 3.1E-70 6.7E-75 625.9 45.8 863 10-1065 191-1149(1160)
24 TIGR01494 ATPase_P-type ATPase 100.0 1.8E-68 4E-73 646.8 51.1 477 39-864 3-484 (499)
25 COG2217 ZntA Cation transport 100.0 1.7E-64 3.6E-69 611.2 46.5 524 13-864 144-682 (713)
26 KOG0205 Plasma membrane H+-tra 100.0 3.5E-64 7.6E-69 563.9 22.8 554 34-858 95-661 (942)
27 PRK11033 zntA zinc/cadmium/mer 100.0 5.6E-61 1.2E-65 599.5 48.3 485 45-862 211-709 (741)
28 KOG0207 Cation transport ATPas 100.0 3.4E-60 7.3E-65 558.0 39.0 505 49-862 350-866 (951)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 2.9E-59 6.4E-64 571.4 45.2 490 48-862 26-528 (556)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 3.6E-58 7.8E-63 559.8 45.6 476 46-862 60-547 (562)
31 TIGR01512 ATPase-IB2_Cd heavy 100.0 4E-57 8.6E-62 549.0 45.1 464 54-863 32-508 (536)
32 PRK10671 copA copper exporting 100.0 4E-56 8.6E-61 567.4 48.4 490 45-862 291-793 (834)
33 COG2216 KdpB High-affinity K+ 100.0 2.3E-49 5E-54 436.5 36.6 516 41-867 70-598 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 5.5E-30 1.2E-34 280.0 20.6 222 43-347 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 9.3E-22 2E-26 212.5 15.2 97 617-801 115-215 (215)
36 PF13246 Hydrolase_like2: Puta 99.5 2.3E-14 5.1E-19 131.3 6.3 90 442-550 1-90 (91)
37 COG4087 Soluble P-type ATPase 99.4 4.2E-13 9E-18 124.5 9.6 122 618-828 19-142 (152)
38 PF00689 Cation_ATPase_C: Cati 99.1 5.2E-10 1.1E-14 117.6 11.5 170 875-1059 3-182 (182)
39 KOG4383 Uncharacterized conser 98.9 2.1E-06 4.7E-11 99.3 30.9 287 614-908 811-1147(1354)
40 COG0560 SerB Phosphoserine pho 98.6 2.6E-07 5.7E-12 98.9 13.0 113 628-812 76-191 (212)
41 TIGR02137 HSK-PSP phosphoserin 98.6 1.6E-07 3.5E-12 99.9 10.6 117 629-822 68-184 (203)
42 PRK11133 serB phosphoserine ph 98.5 2.9E-07 6.3E-12 104.7 10.6 128 629-831 181-311 (322)
43 TIGR00338 serB phosphoserine p 98.5 6.6E-07 1.4E-11 97.0 10.2 128 629-831 85-216 (219)
44 PRK10513 sugar phosphate phosp 98.1 6.3E-06 1.4E-10 92.5 9.4 61 762-824 188-254 (270)
45 PF12710 HAD: haloacid dehalog 98.1 1.1E-05 2.4E-10 85.3 10.2 93 632-798 92-192 (192)
46 COG0561 Cof Predicted hydrolas 98.1 2.7E-05 5.8E-10 87.1 13.8 194 624-824 14-247 (264)
47 KOG1615 Phosphoserine phosphat 98.0 8.1E-06 1.8E-10 82.1 6.7 113 629-811 88-203 (227)
48 PRK13582 thrH phosphoserine ph 98.0 2.3E-05 5E-10 84.0 10.3 121 629-826 68-189 (205)
49 TIGR01670 YrbI-phosphatas 3-de 98.0 2.6E-05 5.7E-10 79.4 9.8 95 637-823 36-133 (154)
50 PRK01158 phosphoglycolate phos 98.0 2.7E-05 5.8E-10 85.1 10.1 181 630-824 21-215 (230)
51 TIGR01487 SPP-like sucrose-pho 98.0 2.7E-05 5.7E-10 84.3 9.6 174 629-824 18-205 (215)
52 TIGR01482 SPP-subfamily Sucros 97.9 5E-05 1.1E-09 82.7 10.4 184 629-824 15-207 (225)
53 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.8 9.4E-05 2E-09 78.8 10.9 118 629-819 80-200 (201)
54 TIGR03333 salvage_mtnX 2-hydro 97.8 4.5E-05 9.8E-10 82.4 8.4 112 628-806 69-181 (214)
55 PRK09484 3-deoxy-D-manno-octul 97.8 5.5E-05 1.2E-09 79.4 8.2 96 636-823 55-153 (183)
56 PLN02954 phosphoserine phospha 97.8 0.00011 2.4E-09 80.0 10.0 41 629-669 84-124 (224)
57 PRK10976 putative hydrolase; P 97.8 0.0001 2.2E-09 82.6 9.9 61 761-823 181-249 (266)
58 PRK15126 thiamin pyrimidine py 97.7 6.6E-05 1.4E-09 84.3 8.4 58 761-820 179-242 (272)
59 TIGR02726 phenyl_P_delta pheny 97.7 8.4E-05 1.8E-09 76.5 8.2 97 636-823 41-139 (169)
60 TIGR01488 HAD-SF-IB Haloacid D 97.7 0.00012 2.6E-09 76.4 8.6 40 630-669 74-113 (177)
61 PRK08238 hypothetical protein; 97.7 0.0091 2E-07 71.9 25.5 41 629-669 72-112 (479)
62 PF08282 Hydrolase_3: haloacid 97.7 0.00011 2.5E-09 80.8 8.7 57 767-825 185-245 (254)
63 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.6 0.00015 3.2E-09 77.5 8.8 113 626-809 84-199 (202)
64 TIGR01489 DKMTPPase-SF 2,3-dik 97.6 0.00018 3.8E-09 75.8 8.7 42 628-669 71-112 (188)
65 TIGR01486 HAD-SF-IIB-MPGP mann 97.5 0.00043 9.2E-09 77.0 11.0 40 630-669 17-56 (256)
66 PLN02887 hydrolase family prot 97.5 0.00046 9.9E-09 84.4 12.1 55 768-824 507-565 (580)
67 PRK03669 mannosyl-3-phosphogly 97.5 0.00073 1.6E-08 75.8 12.7 39 630-668 25-63 (271)
68 PRK10530 pyridoxal phosphate ( 97.5 0.00043 9.3E-09 77.7 10.3 55 768-824 199-257 (272)
69 PRK09552 mtnX 2-hydroxy-3-keto 97.4 0.00042 9.2E-09 75.1 8.8 38 629-666 74-111 (219)
70 TIGR01485 SPP_plant-cyano sucr 97.4 0.0011 2.3E-08 73.5 12.1 178 627-809 19-212 (249)
71 PRK12702 mannosyl-3-phosphogly 97.4 0.0013 2.8E-08 72.5 12.3 42 628-669 17-58 (302)
72 TIGR00099 Cof-subfamily Cof su 97.4 0.00053 1.1E-08 76.3 9.5 61 762-824 180-246 (256)
73 cd01427 HAD_like Haloacid deha 97.4 0.00055 1.2E-08 67.3 8.3 117 626-805 21-138 (139)
74 TIGR02471 sucr_syn_bact_C sucr 97.4 0.00094 2E-08 73.3 10.9 177 635-819 21-212 (236)
75 TIGR02461 osmo_MPG_phos mannos 97.3 0.001 2.2E-08 72.3 10.3 43 627-669 13-55 (225)
76 TIGR02463 MPGP_rel mannosyl-3- 97.2 0.0022 4.8E-08 69.6 11.4 36 634-669 21-56 (221)
77 PRK00192 mannosyl-3-phosphogly 97.2 0.0031 6.6E-08 70.9 12.8 42 628-669 20-61 (273)
78 PRK13222 phosphoglycolate phos 97.2 0.0012 2.6E-08 71.8 9.2 42 628-669 92-133 (226)
79 COG0546 Gph Predicted phosphat 97.1 0.0034 7.4E-08 68.1 11.3 44 627-670 87-130 (220)
80 PRK14502 bifunctional mannosyl 97.1 0.0044 9.5E-08 75.8 13.1 37 632-668 436-472 (694)
81 PRK10187 trehalose-6-phosphate 97.0 0.0069 1.5E-07 67.6 13.4 182 629-825 36-233 (266)
82 TIGR01484 HAD-SF-IIB HAD-super 97.0 0.0039 8.4E-08 66.7 11.0 38 629-666 17-54 (204)
83 TIGR01449 PGP_bact 2-phosphogl 96.8 0.0038 8.3E-08 67.1 8.7 41 629-669 85-125 (213)
84 PLN02382 probable sucrose-phos 96.8 0.011 2.3E-07 70.3 12.7 169 636-809 35-223 (413)
85 PRK13223 phosphoglycolate phos 96.7 0.0048 1E-07 69.2 8.6 42 627-668 99-140 (272)
86 TIGR01454 AHBA_synth_RP 3-amin 96.7 0.0057 1.2E-07 65.5 8.8 41 629-669 75-115 (205)
87 TIGR01544 HAD-SF-IE haloacid d 96.7 0.02 4.3E-07 63.5 12.8 44 629-672 121-164 (277)
88 PRK13226 phosphoglycolate phos 96.5 0.0088 1.9E-07 65.3 8.9 41 629-669 95-135 (229)
89 PRK13225 phosphoglycolate phos 96.4 0.015 3.2E-07 65.2 9.9 41 629-669 142-182 (273)
90 TIGR01545 YfhB_g-proteo haloac 96.4 0.023 5E-07 61.1 10.9 111 629-811 94-205 (210)
91 PRK14501 putative bifunctional 96.3 0.1 2.2E-06 67.0 17.8 181 630-825 515-713 (726)
92 PLN03243 haloacid dehalogenase 96.2 0.017 3.8E-07 64.1 9.2 41 629-669 109-149 (260)
93 PRK10826 2-deoxyglucose-6-phos 96.2 0.014 3.1E-07 63.2 8.1 42 628-669 91-132 (222)
94 PRK13288 pyrophosphatase PpaX; 96.0 0.021 4.5E-07 61.6 8.2 41 629-669 82-122 (214)
95 PRK11590 hypothetical protein; 95.9 0.065 1.4E-06 57.7 11.4 112 629-812 95-207 (211)
96 PTZ00174 phosphomannomutase; P 95.8 0.1 2.2E-06 57.7 12.9 48 763-811 181-235 (247)
97 COG1778 Low specificity phosph 95.8 0.021 4.6E-07 56.3 6.3 33 636-668 42-74 (170)
98 PRK11587 putative phosphatase; 95.6 0.054 1.2E-06 58.6 9.8 40 629-668 83-122 (218)
99 TIGR03351 PhnX-like phosphonat 95.4 0.06 1.3E-06 58.2 9.2 42 628-669 86-127 (220)
100 COG4030 Uncharacterized protei 95.3 0.071 1.5E-06 55.4 8.6 163 629-828 83-255 (315)
101 PF05116 S6PP: Sucrose-6F-phos 95.3 0.089 1.9E-06 58.1 10.3 166 641-811 31-211 (247)
102 TIGR00685 T6PP trehalose-phosp 95.3 0.19 4.1E-06 55.4 12.7 66 760-828 159-235 (244)
103 TIGR01548 HAD-SF-IA-hyp1 haloa 95.1 0.067 1.5E-06 56.8 8.3 44 626-669 103-146 (197)
104 PLN02779 haloacid dehalogenase 95.0 0.12 2.5E-06 58.6 10.1 37 629-665 144-180 (286)
105 TIGR01672 AphA HAD superfamily 94.9 0.048 1E-06 59.4 6.5 41 629-669 114-158 (237)
106 PLN02575 haloacid dehalogenase 94.9 0.12 2.6E-06 60.1 9.9 41 629-669 216-256 (381)
107 TIGR01662 HAD-SF-IIIA HAD-supe 94.7 0.13 2.8E-06 50.7 8.5 41 628-668 24-72 (132)
108 TIGR01422 phosphonatase phosph 94.7 0.11 2.5E-06 57.5 8.9 41 629-669 99-139 (253)
109 TIGR01428 HAD_type_II 2-haloal 94.5 0.11 2.5E-06 55.0 7.9 40 629-668 92-131 (198)
110 PRK11009 aphA acid phosphatase 94.4 0.1 2.2E-06 56.8 7.6 42 628-669 113-158 (237)
111 PRK06698 bifunctional 5'-methy 94.4 0.16 3.5E-06 61.5 10.1 41 629-669 330-370 (459)
112 TIGR02253 CTE7 HAD superfamily 94.3 0.22 4.7E-06 53.8 9.7 40 629-668 94-133 (221)
113 PLN02811 hydrolase 93.9 0.19 4.2E-06 54.4 8.3 31 629-659 78-108 (220)
114 PRK06769 hypothetical protein; 93.8 0.32 7E-06 50.5 9.4 41 616-656 11-55 (173)
115 PLN02770 haloacid dehalogenase 93.8 0.29 6.3E-06 54.1 9.7 41 629-669 108-148 (248)
116 PRK09449 dUMP phosphatase; Pro 93.6 0.31 6.8E-06 52.8 9.5 39 629-668 95-133 (224)
117 PRK13478 phosphonoacetaldehyde 93.5 0.34 7.3E-06 54.2 9.7 41 629-669 101-141 (267)
118 PLN02940 riboflavin kinase 93.3 0.3 6.5E-06 57.6 9.1 40 629-668 93-133 (382)
119 PF13419 HAD_2: Haloacid dehal 93.2 0.2 4.3E-06 51.3 6.8 44 626-669 74-117 (176)
120 TIGR01509 HAD-SF-IA-v3 haloaci 93.2 0.3 6.4E-06 50.8 8.1 40 629-669 85-124 (183)
121 PRK08942 D,D-heptose 1,7-bisph 93.2 0.52 1.1E-05 49.3 9.9 27 629-655 29-55 (181)
122 PLN02580 trehalose-phosphatase 93.1 2.2 4.7E-05 49.8 15.5 63 763-828 293-369 (384)
123 PRK14988 GMP/IMP nucleotidase; 93.0 0.33 7.2E-06 52.8 8.3 41 629-669 93-133 (224)
124 PLN03017 trehalose-phosphatase 92.7 5.7 0.00012 46.0 17.9 200 617-827 119-350 (366)
125 TIGR02009 PGMB-YQAB-SF beta-ph 92.7 0.29 6.3E-06 51.1 7.2 39 628-668 87-125 (185)
126 TIGR01990 bPGM beta-phosphoglu 92.6 0.24 5.2E-06 51.8 6.4 39 628-668 86-124 (185)
127 TIGR01685 MDP-1 magnesium-depe 92.5 0.61 1.3E-05 48.4 9.0 53 617-669 33-86 (174)
128 PHA02530 pseT polynucleotide k 92.5 0.3 6.5E-06 55.6 7.5 45 625-669 183-227 (300)
129 PLN02205 alpha,alpha-trehalose 92.4 3.3 7.1E-05 53.8 17.3 38 629-666 616-654 (854)
130 TIGR00213 GmhB_yaeD D,D-heptos 92.4 0.63 1.4E-05 48.5 9.2 46 782-827 124-173 (176)
131 smart00775 LNS2 LNS2 domain. T 91.2 1.3 2.9E-05 45.1 9.8 34 627-660 25-58 (157)
132 TIGR02254 YjjG/YfnB HAD superf 91.1 0.92 2E-05 48.9 9.1 40 629-669 97-136 (224)
133 TIGR01681 HAD-SF-IIIC HAD-supe 91.0 0.67 1.4E-05 45.5 7.2 39 629-667 29-68 (128)
134 TIGR01668 YqeG_hyp_ppase HAD s 90.8 0.85 1.8E-05 47.2 8.1 41 628-668 42-83 (170)
135 COG4359 Uncharacterized conser 90.6 1.4 3E-05 44.9 8.8 37 767-804 146-182 (220)
136 TIGR01656 Histidinol-ppas hist 90.3 0.76 1.6E-05 46.3 7.0 27 629-655 27-53 (147)
137 TIGR01261 hisB_Nterm histidino 90.3 1 2.2E-05 46.3 7.9 26 629-654 29-54 (161)
138 TIGR02252 DREG-2 REG-2-like, H 90.2 0.84 1.8E-05 48.6 7.7 39 629-668 105-143 (203)
139 TIGR01549 HAD-SF-IA-v1 haloaci 90.1 1 2.3E-05 45.4 7.9 40 627-666 62-101 (154)
140 PRK05446 imidazole glycerol-ph 89.1 1.2 2.7E-05 51.4 8.3 26 628-653 29-54 (354)
141 PLN02423 phosphomannomutase 88.0 3.1 6.8E-05 45.8 10.3 49 761-811 180-235 (245)
142 TIGR01533 lipo_e_P4 5'-nucleot 87.7 2.4 5.2E-05 47.1 9.1 43 627-669 116-161 (266)
143 smart00577 CPDc catalytic doma 87.4 0.7 1.5E-05 46.6 4.4 43 626-669 42-84 (148)
144 TIGR01664 DNA-3'-Pase DNA 3'-p 86.2 2.1 4.5E-05 44.2 7.2 26 630-655 43-68 (166)
145 TIGR01457 HAD-SF-IIA-hyp2 HAD- 85.9 31 0.00066 38.1 16.8 49 622-670 10-61 (249)
146 TIGR01691 enolase-ppase 2,3-di 85.2 2.8 6.1E-05 45.3 7.9 39 626-664 92-130 (220)
147 TIGR02247 HAD-1A3-hyp Epoxide 85.0 1.4 3E-05 47.2 5.5 29 629-657 94-122 (211)
148 PLN02919 haloacid dehalogenase 83.4 3.7 7.9E-05 55.0 9.4 41 629-669 161-201 (1057)
149 TIGR01686 FkbH FkbH-like domai 81.4 3.3 7.1E-05 47.7 6.9 37 629-665 31-67 (320)
150 TIGR01459 HAD-SF-IIA-hyp4 HAD- 81.4 6.2 0.00014 43.3 8.9 48 622-669 17-66 (242)
151 PF06888 Put_Phosphatase: Puta 80.9 6.8 0.00015 42.6 8.7 41 629-669 71-113 (234)
152 PHA02597 30.2 hypothetical pro 79.3 6.8 0.00015 41.4 8.1 36 769-804 132-170 (197)
153 PF02358 Trehalose_PPase: Treh 78.4 13 0.00029 40.5 10.2 69 756-824 153-233 (235)
154 PF13344 Hydrolase_6: Haloacid 77.5 2.3 5.1E-05 39.8 3.4 48 622-669 7-57 (101)
155 PLN02177 glycerol-3-phosphate 77.2 24 0.00051 43.1 12.6 92 766-867 174-265 (497)
156 PRK09456 ?-D-glucose-1-phospha 76.6 6.8 0.00015 41.5 7.1 30 629-658 84-113 (199)
157 PLN02151 trehalose-phosphatase 76.2 90 0.0019 36.3 16.2 70 758-828 258-337 (354)
158 PRK10563 6-phosphogluconate ph 73.1 4.5 9.7E-05 43.6 4.7 39 628-669 87-125 (221)
159 PLN02645 phosphoglycolate phos 70.0 14 0.0003 42.4 8.0 47 622-668 37-86 (311)
160 COG0241 HisB Histidinol phosph 69.3 30 0.00065 36.1 9.4 47 758-806 89-146 (181)
161 PF09419 PGP_phosphatase: Mito 67.6 21 0.00045 36.8 7.8 43 626-668 56-107 (168)
162 COG3769 Predicted hydrolase (H 63.0 8.5 0.00018 40.6 3.9 30 782-811 210-241 (274)
163 TIGR01675 plant-AP plant acid 62.2 30 0.00065 37.5 8.1 30 629-658 120-149 (229)
164 PF08235 LNS2: LNS2 (Lipin/Ned 60.6 76 0.0016 32.3 10.1 44 760-803 94-141 (157)
165 PRK10444 UMP phosphatase; Prov 60.2 9.3 0.0002 42.2 4.0 45 622-666 10-54 (248)
166 PHA03398 viral phosphatase sup 57.5 15 0.00031 41.3 4.8 40 630-669 148-188 (303)
167 COG2179 Predicted hydrolase of 57.3 30 0.00065 35.3 6.5 39 630-668 47-85 (175)
168 TIGR01458 HAD-SF-IIA-hyp3 HAD- 57.1 16 0.00034 40.6 5.1 48 622-669 10-64 (257)
169 TIGR01684 viral_ppase viral ph 57.1 15 0.00033 41.1 4.9 41 630-670 146-187 (301)
170 TIGR01993 Pyr-5-nucltdase pyri 56.0 30 0.00066 35.9 6.9 37 629-668 84-120 (184)
171 PF06570 DUF1129: Protein of u 55.7 1.8E+02 0.0039 31.1 12.7 23 995-1017 150-172 (206)
172 PF13380 CoA_binding_2: CoA bi 55.3 14 0.00031 35.5 3.9 39 630-668 64-103 (116)
173 KOG4050 Glutamate transporter 54.3 84 0.0018 31.5 8.8 47 816-862 21-67 (188)
174 PTZ00445 p36-lilke protein; Pr 46.4 31 0.00066 36.8 4.8 29 630-658 76-104 (219)
175 TIGR01663 PNK-3'Pase polynucle 45.6 53 0.0011 40.4 7.5 26 630-655 198-223 (526)
176 COG0474 MgtA Cation transport 45.4 4.2E+02 0.009 35.3 16.2 42 1034-1076 852-893 (917)
177 KOG3040 Predicted sugar phosph 42.3 46 0.001 35.0 5.2 48 618-665 12-59 (262)
178 COG4858 Uncharacterized membra 41.6 1.7E+02 0.0036 30.4 8.8 33 988-1020 158-190 (226)
179 PRK10748 flavin mononucleotide 41.6 46 0.001 36.3 5.7 28 629-657 113-140 (238)
180 PRK10725 fructose-1-P/6-phosph 40.7 71 0.0015 33.1 6.8 37 631-669 90-126 (188)
181 PF05297 Herpes_LMP1: Herpesvi 40.4 9.3 0.0002 41.5 0.0 13 1034-1046 167-179 (381)
182 TIGR01493 HAD-SF-IA-v2 Haloaci 38.8 38 0.00083 34.7 4.3 33 629-668 90-122 (175)
183 PRK07668 hypothetical protein; 38.6 5.9E+02 0.013 28.2 14.3 28 888-915 32-59 (254)
184 PRK10517 magnesium-transportin 38.6 6.2E+02 0.013 33.7 16.2 67 43-113 125-194 (902)
185 TIGR01452 PGP_euk phosphoglyco 36.7 65 0.0014 36.1 6.1 50 622-671 11-63 (279)
186 COG1877 OtsB Trehalose-6-phosp 36.1 6.6E+02 0.014 28.1 13.6 46 756-801 170-218 (266)
187 cd02071 MM_CoA_mut_B12_BD meth 36.0 95 0.0021 30.0 6.3 80 565-668 22-103 (122)
188 COG0637 Predicted phosphatase/ 35.7 93 0.002 33.6 6.9 43 628-670 85-127 (221)
189 PF03767 Acid_phosphat_B: HAD 35.5 1.1E+02 0.0024 33.3 7.4 29 628-656 114-142 (229)
190 TIGR01106 ATPase-IIC_X-K sodiu 35.0 7.8E+02 0.017 33.2 16.6 124 77-250 160-285 (997)
191 PRK10444 UMP phosphatase; Prov 35.0 3.2E+02 0.0069 30.1 11.0 45 780-824 190-241 (248)
192 TIGR01657 P-ATPase-V P-type AT 34.1 1.5E+02 0.0033 40.1 9.8 21 78-98 249-271 (1054)
193 KOG2927 Membrane component of 33.9 1E+02 0.0022 35.1 6.7 17 1061-1077 256-272 (372)
194 PF14336 DUF4392: Domain of un 33.3 1.2E+02 0.0025 34.4 7.3 36 633-668 64-100 (291)
195 TIGR01501 MthylAspMutase methy 33.2 1E+02 0.0023 30.5 6.0 80 565-668 24-111 (134)
196 PRK11507 ribosome-associated p 32.8 43 0.00092 29.0 2.8 26 74-99 38-63 (70)
197 PF13253 DUF4044: Protein of u 31.6 1.5E+02 0.0032 22.1 4.9 21 220-240 2-22 (35)
198 PF13275 S4_2: S4 domain; PDB: 31.4 25 0.00054 30.0 1.2 24 75-98 35-58 (65)
199 TIGR01458 HAD-SF-IIA-hyp3 HAD- 31.3 98 0.0021 34.3 6.3 48 781-828 196-250 (257)
200 COG5012 Predicted cobalamin bi 29.4 61 0.0013 34.7 3.8 65 565-653 127-191 (227)
201 COG0647 NagD Predicted sugar p 27.7 70 0.0015 35.7 4.2 45 621-665 16-60 (269)
202 TIGR01522 ATPase-IIA2_Ca golgi 27.5 4.8E+02 0.01 34.6 12.7 21 79-99 138-158 (884)
203 cd02067 B12-binding B12 bindin 27.1 1.3E+02 0.0028 28.7 5.6 80 565-668 22-103 (119)
204 PF03120 DNA_ligase_OB: NAD-de 26.9 35 0.00076 30.6 1.4 27 84-110 45-72 (82)
205 PF12710 HAD: haloacid dehalog 26.8 33 0.00071 35.7 1.4 14 354-367 1-14 (192)
206 COG1011 Predicted hydrolase (H 26.8 2.3E+02 0.0049 30.2 8.1 40 629-669 99-138 (229)
207 COG1188 Ribosome-associated he 26.7 60 0.0013 30.2 2.8 29 74-103 35-63 (100)
208 TIGR02250 FCP1_euk FCP1-like p 26.5 99 0.0021 31.5 4.8 45 624-669 53-97 (156)
209 PRK02261 methylaspartate mutas 26.4 1.1E+02 0.0025 30.3 5.1 65 565-653 26-92 (137)
210 smart00831 Cation_ATPase_N Cat 26.0 1.7E+02 0.0037 24.4 5.5 39 213-251 23-61 (64)
211 cd05013 SIS_RpiR RpiR-like pro 24.5 4.3E+02 0.0094 25.2 9.0 26 632-657 74-99 (139)
212 TIGR01517 ATPase-IIB_Ca plasma 24.4 1.5E+02 0.0033 39.6 7.2 97 7-112 83-194 (941)
213 PRK08508 biotin synthase; Prov 24.3 4.3E+02 0.0094 29.6 9.9 45 634-678 101-161 (279)
214 TIGR01689 EcbF-BcbF capsule bi 24.2 59 0.0013 31.8 2.5 33 628-660 23-55 (126)
215 TIGR00640 acid_CoA_mut_C methy 24.1 2E+02 0.0043 28.4 6.3 81 564-668 24-106 (132)
216 TIGR00739 yajC preprotein tran 23.6 1.1E+02 0.0023 27.8 3.8 9 39-47 5-13 (84)
217 PF13242 Hydrolase_like: HAD-h 23.6 1.6E+02 0.0035 25.5 5.0 46 781-826 21-73 (75)
218 PF14985 TM140: TM140 protein 23.5 4E+02 0.0086 26.7 7.8 43 897-945 49-91 (181)
219 PF12791 RsgI_N: Anti-sigma fa 22.7 1.2E+02 0.0025 24.9 3.7 38 68-105 3-42 (56)
220 PRK15116 sulfur acceptor prote 22.3 1.7E+02 0.0038 32.6 6.0 47 755-802 121-169 (268)
221 TIGR01512 ATPase-IB2_Cd heavy 22.2 7.1E+02 0.015 30.9 12.1 23 77-99 74-96 (536)
222 PF12148 DUF3590: Protein of u 22.0 41 0.0009 30.3 0.9 25 80-104 57-81 (85)
223 PF04551 GcpE: GcpE protein; 21.6 1.3E+03 0.028 26.8 13.8 118 543-678 146-271 (359)
224 TIGR00223 panD L-aspartate-alp 20.9 1.6E+02 0.0035 28.5 4.6 84 456-589 18-101 (126)
225 PRK05449 aspartate alpha-decar 20.2 1.8E+02 0.0039 28.3 4.8 84 456-589 18-101 (126)
226 cd06919 Asp_decarbox Aspartate 20.2 1.6E+02 0.0034 28.0 4.3 84 456-589 17-100 (111)
227 PF13198 DUF4014: Protein of u 20.2 2.6E+02 0.0057 24.2 5.1 40 13-61 13-52 (72)
228 TIGR01680 Veg_Stor_Prot vegeta 20.0 4.5E+02 0.0097 29.4 8.5 30 628-657 144-173 (275)
229 TIGR02826 RNR_activ_nrdG3 anae 20.0 1.4E+02 0.003 30.1 4.3 37 618-655 62-98 (147)
No 1
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=4.3e-222 Score=2021.21 Aligned_cols=1038 Identities=53% Similarity=0.897 Sum_probs=957.8
Q ss_pred ccccccHHHhh--hhhhHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhccceEEEeeCC
Q 001087 2 FLPFYQKGCLN--RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQ 79 (1159)
Q Consensus 2 ~~tFlpk~L~~--~~~~n~yfl~i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~~~~~V~r~g 79 (1159)
++|||||+||| +|+||+|||++++||++|++|++++++++||++|+.++++||++||++||++|+++|+++++|++++
T Consensus 44 ~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~ 123 (1151)
T KOG0206|consen 44 LFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFVLGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGD 123 (1151)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeeeehHHHHHHHHhhhhhhhccHHhhcceeEEecCC
Confidence 68999999999 9999999999999999999999999999999999999999999999999999999999999999964
Q ss_pred e-EEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEE
Q 001087 80 R-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQ 158 (1159)
Q Consensus 80 ~-~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~ 158 (1159)
. +++..|++|+|||+|++.++|.+|||++||+||+++|.|||||+|||||||+|.|++++.+....+.+.+.+++|.|+
T Consensus 124 ~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~ 203 (1151)
T KOG0206|consen 124 GCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIE 203 (1151)
T ss_pred ceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeehhhhhcccccccccccCCceE
Confidence 3 999999999999999999999999999999999999999999999999999999999999988556677889999999
Q ss_pred ecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccCCCCCCcCHHHHHHHHHHHHH
Q 001087 159 CEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILAL 238 (1159)
Q Consensus 159 ~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~~~~~k~s~l~~~~n~~~~~l 238 (1159)
||+||+++|.|.|++..+++..|++++|+++|||+||||.|++|+|++||+|||+|+|+..+|.|+|+++|.+|+.+..+
T Consensus 204 cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~ 283 (1151)
T KOG0206|consen 204 CEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILL 283 (1151)
T ss_pred EcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHhcCCCccccchhhhhhhhhHHHH
Confidence 99999999999999998877679999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccc------cccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHH
Q 001087 239 FATLTVMCLICAIGSAIFIDKK------HYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIET 312 (1159)
Q Consensus 239 ~~~~~~l~~i~~i~~~~~~~~~------~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~ 312 (1159)
+++++++|++++++..+|...+ .||+... +....++..|++++++|+++||+|||+++|+
T Consensus 284 ~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~f~t~~il~~~liPISLyvsiEi 349 (1151)
T KOG0206|consen 284 FVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPS--------------EAAYAGFVHFLTFIILYQYLIPISLYVSIEI 349 (1151)
T ss_pred HHHHHHHHHHHHhhhheeeeecccccCchhhhcCc--------------hHHHHHHHHHHHHHhhhhceEEEEEEEEeee
Confidence 9999999999999999987632 4555321 1335677899999999999999999999999
Q ss_pred HHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhh
Q 001087 313 IKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQ 392 (1159)
Q Consensus 313 ~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~ 392 (1159)
++++| +.+|++|.+||++++++++.+|+++++|+||||+||+||||||||+|.|+|++|+|+|..|+...++.+....+
T Consensus 350 ik~~q-s~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~ 428 (1151)
T KOG0206|consen 350 VKVLQ-SIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAK 428 (1151)
T ss_pred hHHHH-HHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCc
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999988776555444
Q ss_pred ccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHH
Q 001087 393 QTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVT 472 (1159)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~ 472 (1159)
+.+.. . .....+++.|.++.++++.+...+++..+.+|++++|+||+++|+.+++++++.|+|+||||.|||+
T Consensus 429 ~~~~~-~------~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~ 501 (1151)
T KOG0206|consen 429 RSGGD-V------NEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVE 501 (1151)
T ss_pred ccccc-c------cccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHH
Confidence 32221 0 0122467889999999999998889999999999999999999999766669999999999999999
Q ss_pred HHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCC
Q 001087 473 AAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGN 552 (1159)
Q Consensus 473 ~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~ 552 (1159)
+|+++|+.|..|+++.++++..+ .+.+|++|+++||+|+|||||||||+|+|+++|||||||++|++||+.++
T Consensus 502 aAr~~gf~f~~Rt~~~vti~~~g-------~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~ 574 (1151)
T KOG0206|consen 502 AARELGFVFLGRTPDSVTIRELG-------VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNG 574 (1151)
T ss_pred HHHhcCceeeeccCceEEEeccc-------cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcc
Confidence 99999999999999999998432 35799999999999999999999999999999999999999999999888
Q ss_pred hhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccC
Q 001087 553 EDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQE 632 (1159)
Q Consensus 553 ~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~ 632 (1159)
....+.+.+|+++||.+||||||+|||+++++||.+|+++|++|++++.||++++++++++||+||+|+|+|||||+||+
T Consensus 575 ~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQd 654 (1151)
T KOG0206|consen 575 EKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQD 654 (1151)
T ss_pred hHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhcc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHH
Q 001087 633 GVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKC 712 (1159)
Q Consensus 633 ~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (1159)
||||||+.|++||||+|||||||+|||+|||++|+|++++|+++.++..+.+ ..++..+.. ...+.+..+..+.
T Consensus 655 gVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~-----~~~~~~~~~-~~~~~l~~~~~~~ 728 (1151)
T KOG0206|consen 655 GVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSE-----ELSSLDATA-ALKETLLRKFTEE 728 (1151)
T ss_pred CchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChh-----hhcchhhHH-HHHHHHHHhhhHH
Confidence 9999999999999999999999999999999999999999999999987754 111122222 3445555554444
Q ss_pred HHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCcc
Q 001087 713 IDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAN 792 (1159)
Q Consensus 713 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~N 792 (1159)
...... ......++|||||++|.++++++.+..|+++|..|++|||||+||.|||+||+++|+..|.+|||||||||
T Consensus 729 ~~~~~~---~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGAN 805 (1151)
T KOG0206|consen 729 LEEAKL---EHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGAN 805 (1151)
T ss_pred HHHHhh---ccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCc
Confidence 333322 11114799999999999999999999999999999999999999999999999998899999999999999
Q ss_pred CHHHHHhcccceeecCccchhhhhccceeeccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 001087 793 DVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSG 872 (1159)
Q Consensus 793 Dv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~lll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg 872 (1159)
||+|||+|||||||+|+||+||+++|||+|+||+||.+|||+||||+|.|++++++|+||||+++++++|||.+++||||
T Consensus 806 DVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSg 885 (1151)
T KOG0206|consen 806 DVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSG 885 (1151)
T ss_pred cchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hcc
Q 001087 873 QRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSS 951 (1159)
Q Consensus 873 ~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~ 951 (1159)
|++|++|++.+||++||++|++++|+||||++++.++++|+||+.|+++..|+|++|+.|+++|++||+++||+++ .+.
T Consensus 886 q~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~ 965 (1151)
T KOG0206|consen 886 QTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFE 965 (1151)
T ss_pred CccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhhe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 666
Q ss_pred CCccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeee
Q 001087 952 ATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFV 1031 (1159)
Q Consensus 952 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1159)
......+|++.|+|.+|+++||++|+++++++++++++|||++|+++|||+++||++.++|...+|.++.+.+.++.+.+
T Consensus 966 ~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~ 1045 (1151)
T KOG0206|consen 966 EQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEH 1045 (1151)
T ss_pred eeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHH
Confidence 56788899999999999999999999999999999999999999999999999999999998755555443244444445
Q ss_pred eccchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHhhc
Q 001087 1032 LMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRH 1077 (1159)
Q Consensus 1032 ~~~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~~p~~~~~~~~~~~~ 1077 (1159)
.+++|.||+++++++++|++|+++++++++.++|++++++||+++.
T Consensus 1046 ~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~~ 1091 (1151)
T KOG0206|consen 1046 LLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEKY 1091 (1151)
T ss_pred HhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHhc
Confidence 5599999999999999999999999999999999999999999973
No 2
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=4.9e-193 Score=1833.46 Aligned_cols=1036 Identities=36% Similarity=0.624 Sum_probs=886.5
Q ss_pred ccccccHHHhh--hhhhHHHHHHHHHHhhcc-cccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhccceEEEeeC
Q 001087 2 FLPFYQKGCLN--RRVANCYFLMISILSTTP-MSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQG 78 (1159)
Q Consensus 2 ~~tFlpk~L~~--~~~~n~yfl~i~il~~i~-~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~~~~~V~r~ 78 (1159)
+||||||+||| +|++|+|||+++|+|++| +++++++++++||++|++++++||++||++|+++|+++|+++++|+++
T Consensus 99 ~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~~ 178 (1178)
T PLN03190 99 VFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVD 178 (1178)
T ss_pred cHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCcEEEEEEC
Confidence 68999999999 999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEE
Q 001087 79 QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQ 158 (1159)
Q Consensus 79 g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~ 158 (1159)
|++++++|++|+|||||+|++||.||||++||+|++++|.||||||+|||||+||.|++.+.+... ..+..+++|.|+
T Consensus 179 ~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~ 256 (1178)
T PLN03190 179 DQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSK--IPEKEKINGLIK 256 (1178)
T ss_pred CeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccchhhhc--chhhhhceEEEE
Confidence 999999999999999999999999999999999999999999999999999999999998766422 123356899999
Q ss_pred ecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccCCCCCCcCHHHHHHHHHHHHH
Q 001087 159 CEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILAL 238 (1159)
Q Consensus 159 ~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~~~~~k~s~l~~~~n~~~~~l 238 (1159)
||.||+++|.|.|++.++|+..|++++|+++|||.||||+|++|+|+|||+|||+|+|..+++.|+|++|+++|+++.++
T Consensus 257 ~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l 336 (1178)
T PLN03190 257 CEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLNNSGAPSKRSRLETRMNLEIIIL 336 (1178)
T ss_pred EeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhcCCCCCCCccHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcc---ccccccccCCCCCcc--CCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHH
Q 001087 239 FATLTVMCLICAIGSAIFIDK---KHYYLGLHNMGNSVE--DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETI 313 (1159)
Q Consensus 239 ~~~~~~l~~i~~i~~~~~~~~---~~wy~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~ 313 (1159)
+++++++|++++++..+|... ..||+.+........ ...++........+..|++++++++++||+||+|++|++
T Consensus 337 ~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleiv 416 (1178)
T PLN03190 337 SLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELV 416 (1178)
T ss_pred HHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHH
Confidence 999999999998887776432 245543221000000 000000011123456788899999999999999999999
Q ss_pred HHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhc
Q 001087 314 KFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQ 393 (1159)
Q Consensus 314 ~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~ 393 (1159)
|++| +++|++|.+||+++.++++.||+++++||||||+|||||||||||+|+|+|++|+++|..|+.+....+......
T Consensus 417 k~~q-a~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~ 495 (1178)
T PLN03190 417 RVGQ-AYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGY 495 (1178)
T ss_pred HHHH-HHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhcc
Confidence 9999 999999999999999999999999999999999999999999999999999999999999975322111100000
Q ss_pred cCCCCcccccchhhhccCCCCCCChhhhhcccc--CCCChhhHHHHHHHHhcccceEecccCC--C---CceEEecCChh
Q 001087 394 TGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWR--NEHNPDACKEFFRCLAICHTVLPEGDES--P---ERITYQAASPD 466 (1159)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lalCh~v~~~~~~~--~---~~~~y~~~spd 466 (1159)
....+. .. ..+......++.+...... +.+....+.+|++++|+||++.|+..++ . +.+.|+++|||
T Consensus 496 -~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPd 569 (1178)
T PLN03190 496 -SVEVDG---KI--LRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPD 569 (1178)
T ss_pred -cccccc---cc--ccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCc
Confidence 000000 00 0000001122222221111 1122345789999999999999963221 1 24679999999
Q ss_pred HHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHH
Q 001087 467 EAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYE 546 (1159)
Q Consensus 467 E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~ 546 (1159)
|.||+++|+++|+.|..|+++.+.+...+ ...+|++++++||+|+|||||||+++++|++++||||||++|++
T Consensus 570 E~ALv~~a~~~G~~l~~r~~~~i~i~~~~-------~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~ 642 (1178)
T PLN03190 570 EQALVYAAAAYGFMLIERTSGHIVIDIHG-------ERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFS 642 (1178)
T ss_pred HHHHHHHHHHCCCeEecccCCeEEEeecc-------ceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHH
Confidence 99999999999999999999999886543 35789999999999999999999999999999999999999999
Q ss_pred HhhcC-ChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEee
Q 001087 547 RLANG-NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTA 625 (1159)
Q Consensus 547 ~~~~~-~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ 625 (1159)
+|... +.+..+.+.+++++||++||||||+|||+++++|+++|.++|++|+.++.+|+++++++++++|+||+++|+++
T Consensus 643 ~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~ 722 (1178)
T PLN03190 643 VIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASA 722 (1178)
T ss_pred hhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEE
Confidence 99753 33467788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHH
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEV 705 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1159)
++|+||+||+++|+.|++|||++||||||+.+||++||++|||+++++..+.++..+.+. ..+...+.+
T Consensus 723 ~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~-----------~~~~l~~~~ 791 (1178)
T PLN03190 723 IEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKES-----------CRKSLEDAL 791 (1178)
T ss_pred EecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhh-----------HHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999888886554210 001111100
Q ss_pred HH--HHHH---HHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc
Q 001087 706 KR--ELNK---CIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA 780 (1159)
Q Consensus 706 ~~--~~~~---~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~ 780 (1159)
.. +... ..+.... .......+.++||||.+|.+++++++++.|.+++..|++|||||+||+||++||+++|+..
T Consensus 792 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~ 870 (1178)
T PLN03190 792 VMSKKLTTVSGISQNTGG-SSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRT 870 (1178)
T ss_pred hhhhhccccccccccccc-cccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcC
Confidence 00 0000 0000000 0112245678999999999999988999999999999999999999999999999997666
Q ss_pred CcEEEEecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 001087 781 RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLT 860 (1159)
Q Consensus 781 g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~lll~~Gr~~~~ri~~~i~~~~~kni~~~~~ 860 (1159)
+++|||||||+|||+|||+|||||||+|+||+||++||||+|.+|++|++||++||||+|+|++++++|+||||++++++
T Consensus 871 ~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~ 950 (1178)
T PLN03190 871 SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLV 950 (1178)
T ss_pred CcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHH
Q 001087 861 QFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQS 940 (1159)
Q Consensus 861 ~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s 940 (1159)
+|||+++++|||+++|++|.+++||++||++|++++|+||+|++++.+.++|+||+.++++..|+.+.||.|++.|+|||
T Consensus 951 qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs 1030 (1178)
T PLN03190 951 LFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQS 1030 (1178)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hccCCccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhccCCC
Q 001087 941 LVLYNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1019 (1159)
Q Consensus 941 ~vif~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~~~~~~~~~~~~~~ 1019 (1159)
+++||+++ .+.... .+.+.+|+++++++++++++++++.+++|+|++++++|+|+++|+++.++|..++..
T Consensus 1031 ~iiff~~~~~~~~~~-------~~~~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~~~- 1102 (1178)
T PLN03190 1031 AVVFFVPLFAYWAST-------IDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAIPTL- 1102 (1178)
T ss_pred HHHHHHHHHHhcCCC-------cCceeEhHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcccc-
Confidence 99999988 443321 244567888999999999999999999999999999999999999998888765421
Q ss_pred CCCCceeeEeeeeccchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHhhc
Q 001087 1020 DRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRH 1077 (1159)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~~p~~~~~~~~~~~~ 1077 (1159)
..|+.++..+.+|.||+.++++++++++|+++++++++.++|.+++++||.++.
T Consensus 1103 ----~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~~~ 1156 (1178)
T PLN03190 1103 ----PGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAEKF 1156 (1178)
T ss_pred ----hhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 224444444578999999999999999999999999999999999999997654
No 3
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.9e-179 Score=1729.74 Aligned_cols=1035 Identities=53% Similarity=0.882 Sum_probs=902.3
Q ss_pred ccccccHHHhh--hhhhHHHHHHHHHHhhcc-cccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhccceEEEeeC
Q 001087 2 FLPFYQKGCLN--RRVANCYFLMISILSTTP-MSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQG 78 (1159)
Q Consensus 2 ~~tFlpk~L~~--~~~~n~yfl~i~il~~i~-~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~~~~~V~r~ 78 (1159)
+|||||++||+ +|++|+|||+++++|++| ++|.+++++++||++|++++++++++||++||++|+++|+++++|+|+
T Consensus 13 ~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n~~~~~v~~~ 92 (1057)
T TIGR01652 13 VLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEG 92 (1057)
T ss_pred chhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHhCcEEEEECC
Confidence 68999999999 999999999999999999 999999999999999999999999999999999999999999999997
Q ss_pred -CeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEE
Q 001087 79 -QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEV 157 (1159)
Q Consensus 79 -g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i 157 (1159)
|++++++|+||+|||||+|++||.||||++||++++++|.|+||||+|||||+||.|++.+.+........+.+++|.|
T Consensus 93 ~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i 172 (1057)
T TIGR01652 93 HGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEI 172 (1057)
T ss_pred CCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEE
Confidence 8999999999999999999999999999999999999999999999999999999999987776555556677889999
Q ss_pred EecCCCCCcceeEEEEEEcC-ccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccCCCCCCcCHHHHHHHHHHH
Q 001087 158 QCEQPNNSLYTFTGNLIMQK-QTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLIL 236 (1159)
Q Consensus 158 ~~e~pn~~l~~f~Gt~~~~g-~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~~~~~k~s~l~~~~n~~~~ 236 (1159)
+||.||+++|.|.|++.+++ ...|++.+|+++|||.|+||+|++|+|+|||+|||+++|+..++.|+|++|+++|+++.
T Consensus 173 ~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k~s~le~~ln~~~~ 252 (1057)
T TIGR01652 173 ECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKRSRLEKELNFLII 252 (1057)
T ss_pred EEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCcccccHHHHHHhhHHH
Confidence 99999999999999999988 77899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcc---ccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHH
Q 001087 237 ALFATLTVMCLICAIGSAIFIDK---KHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETI 313 (1159)
Q Consensus 237 ~l~~~~~~l~~i~~i~~~~~~~~---~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~ 313 (1159)
+++.+++++|++++++..+|... ..||+.... +........+..++++++|++++||+|||++++++
T Consensus 253 ~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~----------~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~ 322 (1057)
T TIGR01652 253 ILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDV----------SERNAAANGFFSFLTFLILFSSLIPISLYVSLELV 322 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHheecccCCCccceecCc----------ccccchhHHHHHHHHHHHHHhhhcceeeeehHHHH
Confidence 99999999999998877666532 268875322 01112234566889999999999999999999999
Q ss_pred HHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhc
Q 001087 314 KFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQ 393 (1159)
Q Consensus 314 ~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~ 393 (1159)
+++| +.+|++|.+||+++.++++.+|+++++|+||+|+|||||||||||+|+|+|++|+++|..|+....+......+.
T Consensus 323 ~~~~-~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~ 401 (1057)
T TIGR01652 323 KSVQ-AYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRER 401 (1057)
T ss_pred HHHH-HHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhc
Confidence 9999 999999999999888899999999999999999999999999999999999999999999986543322211111
Q ss_pred cCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecc-cCCCCceEEecCChhHHHHHH
Q 001087 394 TGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEG-DESPERITYQAASPDEAALVT 472 (1159)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~-~~~~~~~~y~~~spdE~Alv~ 472 (1159)
.+...+. +... ....+...+.++.+.+....+++..+.+.+|++++++||++.++. +++++.+.|+++||||.||++
T Consensus 402 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~ 479 (1057)
T TIGR01652 402 LGSYVEN-ENSM-LVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVK 479 (1057)
T ss_pred ccccccc-cccc-cccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHH
Confidence 1100000 0000 000012345555554433323334456789999999999999976 332345889999999999999
Q ss_pred HHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCC
Q 001087 473 AAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGN 552 (1159)
Q Consensus 473 ~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~ 552 (1159)
+|+.+|+.+.+|+++++.+..... | ....|++++++||+|+|||||||+++++|++++||||||++|+++|...+
T Consensus 480 ~a~~~g~~~~~~~~~~~~~~i~~~---~--~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~ 554 (1057)
T TIGR01652 480 AARDVGFVFFERTPKSISLLIEMH---G--ETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGG 554 (1057)
T ss_pred HHHHCCCEEEEecCCceEEEEEeC---C--CEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccc
Confidence 999999999999988544322110 1 24789999999999999999999999999999999999999999998655
Q ss_pred hhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccC
Q 001087 553 EDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQE 632 (1159)
Q Consensus 553 ~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~ 632 (1159)
++..+.+.+++++|+.+|+||||+|||+++++|+++|.++|++|+.++.+|++++++.++++|+||+|+|++|+|||||+
T Consensus 555 ~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~ 634 (1057)
T TIGR01652 555 NQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQE 634 (1057)
T ss_pred hhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhh
Confidence 56678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHH
Q 001087 633 GVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKC 712 (1159)
Q Consensus 633 ~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (1159)
|||++|+.|++||||+|||||||.+||++||++|||++++++.+.+++++.+.. +...+.+.++....
T Consensus 635 ~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~------------~~~~~~i~~~~~~~ 702 (1057)
T TIGR01652 635 GVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDAT------------RSVEAAIKFGLEGT 702 (1057)
T ss_pred ccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhh------------HHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999888888876542110 00011111221111
Q ss_pred HHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCcc
Q 001087 713 IDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAN 792 (1159)
Q Consensus 713 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~N 792 (1159)
..... ......+++++|||++|+.+++++++++|.+++..|+++||||+||+||++||+++|+..|++|+|||||+|
T Consensus 703 ~~~~~---~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~N 779 (1057)
T TIGR01652 703 SEEFN---NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGAN 779 (1057)
T ss_pred HHhhh---hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 11111 122346789999999999999988889999999999999999999999999999996555999999999999
Q ss_pred CHHHHHhcccceeecCccchhhhhccceeeccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 001087 793 DVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSG 872 (1159)
Q Consensus 793 Dv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~lll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg 872 (1159)
|+||||+||||||++|+||.||+++|||+|.+|+++.+++++|||++|+|+++++.|.||||+++++++|||.++++|||
T Consensus 780 D~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~ 859 (1057)
T TIGR01652 780 DVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSG 859 (1057)
T ss_pred cHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hcc
Q 001087 873 QRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSS 951 (1159)
Q Consensus 873 ~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~ 951 (1159)
+++|++|++++||+++|++|++++|++|+|++++++.++|++|+.++++..++.+.|+.|++.|+||++++|++.+ .+.
T Consensus 860 ~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~ 939 (1057)
T TIGR01652 860 QTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYI 939 (1057)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998888 555
Q ss_pred CCccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeee
Q 001087 952 ATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFV 1031 (1159)
Q Consensus 952 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1159)
......+|.+.+++.+|+++|+++++++++++++.+++|+|++++++|+|+++|+++.++|...++ +. ..|+.+..
T Consensus 940 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~--~~--~~~~~~~~ 1015 (1057)
T TIGR01652 940 LGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFP--SP--AFYKAAPR 1015 (1057)
T ss_pred CCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc--cc--cHHHHHHH
Confidence 444446899999999999999999999999999999999999999999999999999888875432 11 33444444
Q ss_pred eccchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHH
Q 001087 1032 LMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQE 1073 (1159)
Q Consensus 1032 ~~~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~~p~~~~~~~~ 1073 (1159)
.+.+|.||+.++++++++++|+++++++++.|+|+.++++||
T Consensus 1016 ~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 1016 VMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred HHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 448999999999999999999999999999999999999875
No 4
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-160 Score=1338.32 Aligned_cols=949 Identities=32% Similarity=0.507 Sum_probs=836.7
Q ss_pred ccccccHHHhh--hhhhHHHHHHHHHHhhcc-cccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhccceEEEeeC
Q 001087 2 FLPFYQKGCLN--RRVANCYFLMISILSTTP-MSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQG 78 (1159)
Q Consensus 2 ~~tFlpk~L~~--~~~~n~yfl~i~il~~i~-~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~~~~~V~r~ 78 (1159)
++||+|.-||+ +.+.|+|||++++.|++| +......+.+.|+.+|++++++||++||++|++.|++.|+.+.+++..
T Consensus 91 ~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Nse~y~~ltr 170 (1051)
T KOG0210|consen 91 IFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNSEKYTKLTR 170 (1051)
T ss_pred eEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhheeecc
Confidence 58999999999 999999999999999999 777888899999999999999999999999999999999999999854
Q ss_pred CeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEE
Q 001087 79 QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQ 158 (1159)
Q Consensus 79 g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~ 158 (1159)
......++++|+|||+|.+++||+||||++||.+|+..|.|+|.|..|||||++|.|-|.+.++++....++.+++ +.
T Consensus 171 ~~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~--v~ 248 (1051)
T KOG0210|consen 171 DGTRREPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEIS--VY 248 (1051)
T ss_pred CCcccccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccchhhccCCcccchheEE--Ee
Confidence 4445559999999999999999999999999999999999999999999999999999999999999888888777 89
Q ss_pred ecCCCCCcceeEEEEEEcCc--cccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccCCCCCCcCHHHHHHHHHHH
Q 001087 159 CEQPNNSLYTFTGNLIMQKQ--TLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLIL 236 (1159)
Q Consensus 159 ~e~pn~~l~~f~Gt~~~~g~--~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~~~~~k~s~l~~~~n~~~~ 236 (1159)
.|+|+++++.|.|++.+..+ ..+|+.+|.||.++.+.. +-++|+|+|||.||+-+||.+.++.|-..+|..+|-+.+
T Consensus 249 Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs-~t~~gvVvYTG~dtRsvMNts~pr~KvGllelEiN~ltK 327 (1051)
T KOG0210|consen 249 AEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVAS-GTAIGVVVYTGRDTRSVMNTSRPRSKVGLLELEINGLTK 327 (1051)
T ss_pred ccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEec-CcEEEEEEEecccHHHHhccCCcccccceeeeecccHHH
Confidence 99999999999999998654 579999999999999985 449999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHH
Q 001087 237 ALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFF 316 (1159)
Q Consensus 237 ~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~ 316 (1159)
++++++++++++....-++ ...||+ .++++++|+++.|||||.+.++++|.+
T Consensus 328 iL~~~vlvLs~vmv~~~g~---~~~wyi-------------------------~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 328 ILFCFVLVLSIVMVAMKGF---GSDWYI-------------------------YIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred HHHHHHHHHHHHHHHhhcC---CCchHH-------------------------HHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 9999999888776443332 235875 789999999999999999999999999
Q ss_pred hhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCch-hhhhhhhhccC
Q 001087 317 QSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGIT-EIERGVAQQTG 395 (1159)
Q Consensus 317 ~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~-~~~~~~~~~~~ 395 (1159)
. ++.|..|.+. .+.++|++++.||||+|+|+.+|||||||+|+|+|++++.+-..|+.+.. +.+.....-..
T Consensus 380 y-s~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~ 452 (1051)
T KOG0210|consen 380 Y-SWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYT 452 (1051)
T ss_pred H-hhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhC
Confidence 9 9999988755 67899999999999999999999999999999999999999999986532 22221111100
Q ss_pred CCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHH
Q 001087 396 MKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAK 475 (1159)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~ 475 (1159)
.. +. .+++. ....+++.+...++..+++|+||+|.|..++ +|...|||.||||.|+|++..
T Consensus 453 ~~--~~-------~~~~~---------~~~~k~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe 513 (1051)
T KOG0210|consen 453 PG--RN-------KGKGA---------LSRVKKDMSARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTE 513 (1051)
T ss_pred CC--cc-------ccccc---------chhhcCcccHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeee
Confidence 00 00 00000 1112234455678999999999999998765 479999999999999999999
Q ss_pred HcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcC-CCcEEEEEecchhHHHHHhhcCChh
Q 001087 476 NFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYA-DGRLVLYCKGADSVIYERLANGNED 554 (1159)
Q Consensus 476 ~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~g~~~l~~KGA~~~i~~~~~~~~~~ 554 (1159)
..|..+..|+.+.+.++.+.+ ...+|+||.++||+|++|||++|||++ .|++..|.||||.+|-.....
T Consensus 514 ~VGl~L~~Rd~~~itL~~~~~------~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~---- 583 (1051)
T KOG0210|consen 514 TVGLKLAKRDRHAITLRVPLD------DELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY---- 583 (1051)
T ss_pred ecceEEeecccceEEEecCCC------cceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc----
Confidence 999999999999999987743 358999999999999999999999997 689999999999999776543
Q ss_pred hHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH-hhhcCcEEEEEeeecccccCC
Q 001087 555 LKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAE-LIEKDLTLIGCTAIEDKLQEG 633 (1159)
Q Consensus 555 ~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~-~iE~dl~llG~~~ieD~lq~~ 633 (1159)
.++.++....+|++|||||++|.|.|+++||+.|.+.|++|+.++.||+++++++.+ .+|+||+++|+||+||+||++
T Consensus 584 -NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~d 662 (1051)
T KOG0210|consen 584 -NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDD 662 (1051)
T ss_pred -chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhh
Confidence 456788889999999999999999999999999999999999999999999999988 899999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHH
Q 001087 634 VPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCI 713 (1159)
Q Consensus 634 v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (1159)
|+.+++.||+||||||||||||.|||+.||++.+|+..+..+..+..-... +....+++
T Consensus 663 Vk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr------------------~dah~eL~--- 721 (1051)
T KOG0210|consen 663 VKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSR------------------GDAHNELN--- 721 (1051)
T ss_pred hHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCc------------------hHHHHHHH---
Confidence 999999999999999999999999999999999999999888887754421 11111111
Q ss_pred HHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccC
Q 001087 714 DEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAND 793 (1159)
Q Consensus 714 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND 793 (1159)
.. ......+|||||.+|+..+. ..+++|.++++.|.+||||||||.|||++++++|+++|+.|++||||.||
T Consensus 722 -~l------R~k~~~aLvi~G~Sl~~cl~-yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGND 793 (1051)
T KOG0210|consen 722 -NL------RRKTDCALVIDGESLEFCLK-YYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGND 793 (1051)
T ss_pred -Hh------hcCCCcEEEEcCchHHHHHH-HHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCcc
Confidence 11 12467899999999999885 67889999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccceeecCccchhhhhccceeeccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 001087 794 VSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQ 873 (1159)
Q Consensus 794 v~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~lll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~ 873 (1159)
|+|||+||+||||-|+||.||..||||+|.||+++.+||++|||.+|+|.+++-+|.+.+..++..+|..|+....|.+.
T Consensus 794 VsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V 873 (1051)
T KOG0210|consen 794 VSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPV 873 (1051)
T ss_pred chheeecccceeeecccccccchhccccHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hccC
Q 001087 874 RFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSA 952 (1159)
Q Consensus 874 ~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~~ 952 (1159)
++|..|.|..|..++|.+|++.+ +.|+|+++.+...||+||++-.+++.++.++|+.|++.++||+.++.++.+ .+..
T Consensus 874 ~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~ 952 (1051)
T KOG0210|consen 874 ALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDT 952 (1051)
T ss_pred HHhhhhHHHHHHHHHHHhhhhee-eecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhh
Confidence 99999999999999999999999 679999999999999999999999999999999999999999999998766 4332
Q ss_pred CccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeee-
Q 001087 953 TGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFV- 1031 (1159)
Q Consensus 953 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1031 (1159)
+.....++.|++++++..+.+++..++|+|.....-..|++++++.+.... .++.
T Consensus 953 ----------ef~~ivaisFtaLi~tELiMVaLtv~tw~~~m~vae~lsL~~Yivsl~~l~--------------~yfd~ 1008 (1051)
T KOG0210|consen 953 ----------EFIHIVAISFTALILTELIMVALTVRTWHWLMVVAELLSLALYIVSLAFLH--------------EYFDR 1008 (1051)
T ss_pred ----------hheEeeeeeeHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH--------------hHHHH
Confidence 233566889999999999999999999999877666667666665543321 1121
Q ss_pred -eccchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHH
Q 001087 1032 -LMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQ 1072 (1159)
Q Consensus 1032 -~~~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~~p~~~~~~~ 1072 (1159)
.+.+..|+.-+.++..++.+|.++.|+++|++.|+.|.+++
T Consensus 1009 ~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl~ 1050 (1051)
T KOG0210|consen 1009 YFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKLQ 1050 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhcc
Confidence 22677777777788899999999999999999999998875
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-118 Score=1132.10 Aligned_cols=803 Identities=28% Similarity=0.392 Sum_probs=634.6
Q ss_pred ccccHHHhh-hhhhHHHHHHHHHHhhcc--ccccc-ccchhhhHHHHHHHHHHHHHHHHHHH---hhhhHhhccceEEEe
Q 001087 4 PFYQKGCLN-RRVANCYFLMISILSTTP--MSPVN-PVTNVVPLSLVLLVSLIKEAWEDWKR---FQNDMTINSTPVEVL 76 (1159)
Q Consensus 4 tFlpk~L~~-~~~~n~yfl~i~il~~i~--~s~~~-~~~~~~pl~~vl~vs~ik~~~ed~~r---~~~d~~~n~~~~~V~ 76 (1159)
+++.++|.+ ..+.+..+++.+++++.. +.+.. .+..+++ +++++++...+++++. .++.+++++.+++|+
T Consensus 69 ~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~~~~~I~~---~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~ 145 (917)
T COG0474 69 SLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDAIVILL---VVVINALLGFVQEYRAEKALEALKKMSSPKAKVL 145 (917)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcceeeehH---HHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Confidence 566677766 555555555555555443 33332 2223333 3334444445555555 566778889999999
Q ss_pred eCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceE
Q 001087 77 QGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGE 156 (1159)
Q Consensus 77 r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~ 156 (1159)
|||++++++|++|+|||||+++.||.||||++||++++. +||||+|||||+|+.|++.....
T Consensus 146 R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l----~VdEs~LTGES~pv~K~~~~~~~-------------- 207 (917)
T COG0474 146 RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL----EVDESALTGESLPVEKQALPLTK-------------- 207 (917)
T ss_pred eCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc----eEEcccccCCCcchhcccccccc--------------
Confidence 999999999999999999999999999999999999885 69999999999999999876441
Q ss_pred EEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccCCCC---CCcCHHHHHHHH
Q 001087 157 VQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIP---SKRSTLERKLDK 233 (1159)
Q Consensus 157 i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~~~~---~k~s~l~~~~n~ 233 (1159)
.|.|. .++..|++++||.++|+. +.|+|++||.+|++++++...+ .+.||+++.+++
T Consensus 208 --~~~~~-----------------~~d~~n~l~sGt~V~~G~-~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~ 267 (917)
T COG0474 208 --SDAPL-----------------GLDRDNMLFSGTTVVSGR-AKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNK 267 (917)
T ss_pred --ccccc-----------------cCCccceEEeCCEEEcce-EEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHH
Confidence 11111 156789999999999654 9999999999999888776433 468999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHH
Q 001087 234 LILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETI 313 (1159)
Q Consensus 234 ~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~ 313 (1159)
+..+++.+.++++++.++... +.....| ...+++++++++.+||++||++++++
T Consensus 268 ~~~~l~~~~l~~~~~~~~~~~-~~~~~~~-------------------------~~~~~~~v~l~va~IPegLp~~vti~ 321 (917)
T COG0474 268 LGKFLLVLALVLGALVFVVGL-FRGGNGL-------------------------LESFLTALALAVAAVPEGLPAVVTIA 321 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhcCccH-------------------------HHHHHHHHHHHHhccccchHHHHHHH
Confidence 999999999988888776653 2211112 33899999999999999999999999
Q ss_pred HHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhc
Q 001087 314 KFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQ 393 (1159)
Q Consensus 314 ~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~ 393 (1159)
++++ +.+| +++++++|+++++|+||++++||||||||||+|+|+|++|++++. +.+.+
T Consensus 322 la~g-~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~--~~~~~--------- 379 (917)
T COG0474 322 LALG-AQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG--GKDID--------- 379 (917)
T ss_pred HHHH-HHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC--ccccc---------
Confidence 9999 9999 789999999999999999999999999999999999999999851 00000
Q ss_pred cCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHH
Q 001087 394 TGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTA 473 (1159)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~ 473 (1159)
+ ..........+++..+++||++.+..+ + .|+.+||+|.||+++
T Consensus 380 -----------------------~--------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~ 423 (917)
T COG0474 380 -----------------------D--------KDLKDSPALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEF 423 (917)
T ss_pred -----------------------c--------cccccchHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHH
Confidence 0 001112334578999999999988755 3 677899999999999
Q ss_pred HHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhc---
Q 001087 474 AKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLAN--- 550 (1159)
Q Consensus 474 a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~--- 550 (1159)
|.+.|+.+ .+ ......|++++.+||||+|||||+|++..+|+++++|||||++|+++|+.
T Consensus 424 a~~~~~~~-~~----------------~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~ 486 (917)
T COG0474 424 AEKLGFSL-DL----------------SGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGE 486 (917)
T ss_pred HHhcCCcC-CH----------------HHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCc
Confidence 99999843 10 00245678999999999999999999987888999999999999999984
Q ss_pred ---CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeec
Q 001087 551 ---GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIE 627 (1159)
Q Consensus 551 ---~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ie 627 (1159)
..++.++.+.+..++|+++|||+|++|||.+++++... .. +.+|+||+|+|+++|+
T Consensus 487 ~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~--------------------~~-~~~E~dl~~lGl~g~~ 545 (917)
T COG0474 487 LEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD--------------------EV-DEIESDLVFLGLTGIE 545 (917)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccc--------------------hh-hhhhccceeehhhhcc
Confidence 23456788899999999999999999999776654211 11 6789999999999999
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
||||++|+++|+.|++||||+||+||||++||++||++||+..+..
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~---------------------------------- 591 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE---------------------------------- 591 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCC----------------------------------
Confidence 9999999999999999999999999999999999999999854321
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEe
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 787 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~i 787 (1159)
. +++|||.+|..+.++++.+.+. .|+ ||||+||+||++||+.+ |+.|++|+|+
T Consensus 592 ------------------~--~~vi~G~el~~l~~~el~~~~~----~~~--VfARvsP~qK~~IV~~l-q~~g~vVamt 644 (917)
T COG0474 592 ------------------S--ALVIDGAELDALSDEELAELVE----ELS--VFARVSPEQKARIVEAL-QKSGHVVAMT 644 (917)
T ss_pred ------------------c--eeEeehHHhhhcCHHHHHHHhh----hCc--EEEEcCHHHHHHHHHHH-HhCCCEEEEe
Confidence 1 6799999999999886555554 444 99999999999999999 5679999999
Q ss_pred cCCccCHHHHHhcccceeec--Cccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 788 GDGANDVSMIQAAHIGVGIS--GQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWF 864 (1159)
Q Consensus 788 GDG~NDv~mL~~AdVGIgis--g~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~ 864 (1159)
|||+||+||||+||||||+. |+|. |+.|||+++.+++|.... +++|||++|.|+++++.|.+++|+..+++++++
T Consensus 645 GDGvNDapALk~ADVGIamg~~Gtda--ak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~ 722 (917)
T COG0474 645 GDGVNDAPALKAADVGIAMGGEGTDA--AKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIY 722 (917)
T ss_pred CCCchhHHHHHhcCccEEecccHHHH--HHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999884 5776 889999999999998877 799999999999999999999999999999999
Q ss_pred HHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHH
Q 001087 865 TFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLY 944 (1159)
Q Consensus 865 ~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif 944 (1159)
.+++.+ ..+|+++|++|+|++++++|++++|++++ +.+.|.++|+ +++..+|+++.++.|++...+++.+++
T Consensus 723 ~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~~--~~~~m~~~~~----~p~~~i~~~~~~~~~i~~~~~~~~i~~ 794 (917)
T COG0474 723 SLFNLF--FLPLTPLQLLWINLLTDSLPALALGVEDP--ESDVMKRPPR----GPEEGLFNRKIFWRFILIIGLLSAILF 794 (917)
T ss_pred HHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCCC--cccccccCCC----CccccccchhHHHHHHHHHHHHHHHHH
Confidence 999776 56799999999999999999999999873 6677777776 788899999999999999999988888
Q ss_pred HHHH-hccCCc-cCCCCcccccccchhHHHHHHHHHHHHHHHHhhccc----h--hhHHHHHHHHHHHHHHHHHHHhhcc
Q 001087 945 NCVT-TSSATG-QNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTI----T--RFHYITVGGSILAWFLFVFLYTGIM 1016 (1159)
Q Consensus 945 ~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~----~--~~~~~~i~~si~~~~~~~~~~~~~~ 1016 (1159)
++.+ ++.... ....+.........++.|+.++++..+........| . ++.+..+|+++++..++.++..+.+
T Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~ 874 (917)
T COG0474 795 ILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLP 874 (917)
T ss_pred HHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhH
Confidence 7777 332221 112221112455678888888888777755433221 1 1256667777666666655555544
Q ss_pred CCCCCCCceeeEeeeec-cchHHHHHHHHHHH
Q 001087 1017 TPNDRQENVFFVIFVLM-STFYFYFTLILVPV 1047 (1159)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~ 1047 (1159)
+. ....++.. .+...|+..+.+..
T Consensus 875 ~~-------~~~~f~~~~~~~~~~~~~~~~~~ 899 (917)
T COG0474 875 PL-------NLKIFQPTPLSLFEWLIAIAVAL 899 (917)
T ss_pred Hh-------HhhhccCCCCcHHHHHHHHHHHH
Confidence 31 11345555 44666777665553
No 6
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-112 Score=982.83 Aligned_cols=862 Identities=22% Similarity=0.265 Sum_probs=652.2
Q ss_pred HHHhh---hhhhHHHHHHH---HHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhH---hhccceEEEeeC
Q 001087 8 KGCLN---RRVANCYFLMI---SILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDM---TINSTPVEVLQG 78 (1159)
Q Consensus 8 k~L~~---~~~~n~yfl~i---~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~---~~n~~~~~V~r~ 78 (1159)
+.+|+ +++-|...+++ ++++++- .++...+.+.+++++.++...+++|+..|+.. ++-+..++|+|+
T Consensus 47 ~~~wk~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~ 122 (972)
T KOG0202|consen 47 ESLWKLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRS 122 (972)
T ss_pred CcHHHHHHHHHHhHHHHHHHHHHHHHHHH----HhcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEec
Confidence 45666 77777554443 3444432 12222222334445555557888898888755 455789999999
Q ss_pred CeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEE
Q 001087 79 QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQ 158 (1159)
Q Consensus 79 g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~ 158 (1159)
|+.+.++.++|+|||||.|+-||+||||++|++..+.. ||||+|||||.|+.|.+..... .+ .
T Consensus 123 gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~sl~----iDeS~LTGEs~pv~K~t~~v~~--~~-----------~ 185 (972)
T KOG0202|consen 123 GKLQHILARELVPGDIVELKVGDKIPADLRLIEAKSLR----IDESSLTGESEPVSKDTDAVPK--DE-----------N 185 (972)
T ss_pred CcccceehhccCCCCEEEEecCCccccceeEEeeeeee----eecccccCCcccccccCccccC--CC-----------C
Confidence 99999999999999999999999999999999998876 9999999999999997644221 00 0
Q ss_pred ecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhc---cCCCCCCcCHHHHHHHHHH
Q 001087 159 CEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMN---SMNIPSKRSTLERKLDKLI 235 (1159)
Q Consensus 159 ~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n---~~~~~~k~s~l~~~~n~~~ 235 (1159)
++..++....|+||.+..|+ +.|+|+.||.+|.+++. ....+..+||+|+++|.+.
T Consensus 186 ~~~~dk~NiaFsGT~V~~G~---------------------a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G 244 (972)
T KOG0202|consen 186 ADVQDKKNIAFSGTLVVAGR---------------------AKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEFG 244 (972)
T ss_pred CccccceeeEeecceeecCc---------------------eeEEEEeccccchHHHHHHHHhccCCCCCcHHHHHHHHH
Confidence 11112333556666666666 99999999999966322 2334666899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHH
Q 001087 236 LALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKF 315 (1159)
Q Consensus 236 ~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~ 315 (1159)
..+.-+..++|+...+...- |++.+.. .+..|......|..++.|.+++||+|||+.+++..+
T Consensus 245 ~qLs~~is~i~v~v~~~nig------~f~~p~~-----------~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLA 307 (972)
T KOG0202|consen 245 KQLSKVISFICVGVWLLNIG------HFLDPVH-----------GGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLA 307 (972)
T ss_pred HHHHHHheehhhhHHHhhhh------hhccccc-----------cccchhchhhhhhHHHHHHHHhccCCCcchhhhhHH
Confidence 99986555555554443111 1111100 011112334578889999999999999999999999
Q ss_pred HhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccC
Q 001087 316 FQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTG 395 (1159)
Q Consensus 316 ~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 395 (1159)
++ .++| +++++++|.+..+|+||.+++||||||||||+|+|.+.++++.+..++.. ++...
T Consensus 308 LG-~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~-~~f~~------- 368 (972)
T KOG0202|consen 308 LG-TRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV-DEFNP------- 368 (972)
T ss_pred Hh-HHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc-ccccc-------
Confidence 99 9988 89999999999999999999999999999999999999999987655432 11000
Q ss_pred CCCcccccchhhhccCCCCCCChhhhhcccc--CCCChhhHHHHHHHHhcccceEecccCCCCceEEe-cCChhHHHHHH
Q 001087 396 MKIPEVERSVKAVHEKGFNFDDPRLLRGAWR--NEHNPDACKEFFRCLAICHTVLPEGDESPERITYQ-AASPDEAALVT 472 (1159)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~-~~spdE~Alv~ 472 (1159)
.+.++.+......+.... .....+.+.++....++||.+..+.++. + .|+ .|.|+|.||..
T Consensus 369 -------------tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~--~~~~~G~pTE~AL~v 432 (972)
T KOG0202|consen 369 -------------TGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-D--CYEKVGEPTEGALIV 432 (972)
T ss_pred -------------CCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-h--hHHhcCCchHHHHHH
Confidence 001111111111111001 1223456889999999999998876653 2 233 38999999999
Q ss_pred HHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCc--EEEEEecchhHHHHHhhc
Q 001087 473 AAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGR--LVLYCKGADSVIYERLAN 550 (1159)
Q Consensus 473 ~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~--~~l~~KGA~~~i~~~~~~ 550 (1159)
.|.++|+.-...+..+ -.+ .+.+ .++-.+.++...++||+|+||+|||.+.++.++ ..+|+|||+|.|++||+.
T Consensus 433 laeKm~l~~~~~~~~s--~~~-~~~c-~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~ 508 (972)
T KOG0202|consen 433 LAEKMGLPGTRSTNLS--NEE-ASAC-NRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCST 508 (972)
T ss_pred HHHHcCCCcchhhccc--ccc-cccc-hhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhc
Confidence 9999998643311000 001 1111 111234556678999999999999999987665 899999999999999954
Q ss_pred -----------CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCH---HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhc
Q 001087 551 -----------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSP---DMYERWNEKFIQAKSSLRDREQKLDEVAELIEK 616 (1159)
Q Consensus 551 -----------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~---~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~ 616 (1159)
-.+..++.+.+...+|+++|||+|++|+++.+. ++-.-| + ..-+...|.
T Consensus 509 ~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~------------~-----~s~~~~~E~ 571 (972)
T KOG0202|consen 509 YYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLN------------D-----TSNRATAES 571 (972)
T ss_pred EEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhc------------c-----ccccccccc
Confidence 123467888899999999999999999997763 111000 0 012356799
Q ss_pred CcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHH
Q 001087 617 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 696 (1159)
Q Consensus 617 dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 696 (1159)
||+|+|++|+-||+|++|+++|+.|++|||+|.|+|||+++||.+||++.|+..++.+
T Consensus 572 ~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed---------------------- 629 (972)
T KOG0202|consen 572 DLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED---------------------- 629 (972)
T ss_pred ceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc----------------------
Confidence 9999999999999999999999999999999999999999999999999999875421
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHH
Q 001087 697 IARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLV 776 (1159)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~l 776 (1159)
--.-+.+|++++.+.++++..... +..+|+|++|.+|.+||+.|
T Consensus 630 ------------------------------~~~~~~TG~efD~ls~~~~~~~~~------~~~vFaR~~P~HK~kIVeaL 673 (972)
T KOG0202|consen 630 ------------------------------VSSMALTGSEFDDLSDEELDDAVR------RVLVFARAEPQHKLKIVEAL 673 (972)
T ss_pred ------------------------------ccccccchhhhhcCCHHHHHHHhh------cceEEEecCchhHHHHHHHH
Confidence 001257888888887777665544 35699999999999999999
Q ss_pred HhccCcEEEEecCCccCHHHHHhcccce--eecCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHH
Q 001087 777 KKGARKITLSIGDGANDVSMIQAAHIGV--GISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYK 853 (1159)
Q Consensus 777 k~~~g~~vl~iGDG~NDv~mL~~AdVGI--gisg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~k 853 (1159)
|+.|.+|+|+|||+||+||||.||||| |++|++. |++|||++|.|++|.+++ .+.+||.+|.||++++.|.+..
T Consensus 674 -q~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSs 750 (972)
T KOG0202|consen 674 -QSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSS 750 (972)
T ss_pred -HhcCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Confidence 789999999999999999999999999 5589999 999999999999999999 7999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccc-chhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHH
Q 001087 854 NLTFTLTQFWFTFQTGFSGQR-FYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIW 932 (1159)
Q Consensus 854 ni~~~~~~~~~~~~~~fsg~~-~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~ 932 (1159)
|+......|+...+ |.| ++++.|++|.|++++.+|+.+||+.++ ++++|+|+|+ ..+..++++..|+.+
T Consensus 751 nVgev~~I~l~aa~----~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~--D~DiM~kpPR----~~~~~iit~~l~~r~ 820 (972)
T KOG0202|consen 751 NVGEVVLIFLTAAF----GIPEPLIPVQILWINLVTDGPPATALGFEPV--DPDIMKKPPR----DSKDGIITGWLIFRY 820 (972)
T ss_pred hHHHHHHHHHHHHh----CCCCcccchhhheeeeeccCCchhhcCCCCC--ChhHHhCCCC----CCCCCeeeHHHHHHH
Confidence 99999999988887 444 489999999999999999999998766 7899999998 778889999999999
Q ss_pred HHHHHHHHHHHHHHHH-hccCC-ccCCCCcc-----------------cccccchhHHHHHHHHHHHHHHHHhhccch--
Q 001087 933 AFFSVYQSLVLYNCVT-TSSAT-GQNSSGKI-----------------FGIWDVSTMAFTCVVVTVNLRLLMMCNTIT-- 991 (1159)
Q Consensus 933 ~~~~~~~s~vif~~~~-~~~~~-~~~~~g~~-----------------~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~-- 991 (1159)
+..|+|.++...+.+. ++... +.-+--++ .......|+.++++++.-.+. ++.+++++
T Consensus 821 l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfN-aL~~~se~~s 899 (972)
T KOG0202|consen 821 LAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFN-ALNCLSENKS 899 (972)
T ss_pred HHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHH-HhhcccCCcc
Confidence 9999999877665555 33321 00000000 000122378888888887777 56666664
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 001087 992 -----RFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGVQRWFS 1064 (1159)
Q Consensus 992 -----~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~~ 1064 (1159)
.|.+.++.+++++.++..+...|+|| ++.+|+.. +++.-|++++.+....++.+.++|++.|.+.
T Consensus 900 lf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~--------l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 900 LFTMPPWSNRWLLWAIALSFVLHFLVLYVPP--------LQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred eEEecccccHHHHHHHHHHHHhhheEEEech--------hhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 36777888899999988888777754 45667777 9999999999999999999999999999875
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.4e-108 Score=1053.69 Aligned_cols=875 Identities=19% Similarity=0.197 Sum_probs=628.2
Q ss_pred hhhhHHHHHH---HHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHh---hccceEEEeeCCeEEEeec
Q 001087 13 RRVANCYFLM---ISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMT---INSTPVEVLQGQRWVSIPW 86 (1159)
Q Consensus 13 ~~~~n~yfl~---i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~---~n~~~~~V~r~g~~~~i~~ 86 (1159)
+++.|.+.++ .++++++. ..|..+++ ++++++++++..++++++..++... +.+.+++|+|||++++|+.
T Consensus 58 ~q~~~~~~~iL~~aails~~~---~~~~~~~i-Il~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a 133 (1053)
T TIGR01523 58 HQVCNAMCMVLIIAAAISFAM---HDWIEGGV-ISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDS 133 (1053)
T ss_pred HHHhCHHHHHHHHHHHHHHHH---hhHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCH
Confidence 4555555444 44444432 34555544 5556666666689999998887544 4567899999999999999
Q ss_pred cCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCc
Q 001087 87 RKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSL 166 (1159)
Q Consensus 87 ~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l 166 (1159)
+||+|||||.|+.||.||||++|+++++. .||||+|||||.|+.|.+...... .. .+...+...
T Consensus 134 ~eLVpGDIv~L~~Gd~VPAD~rLi~~~~L----~VDES~LTGES~pV~K~~~~~~~~---~~---------~~~~~d~~n 197 (1053)
T TIGR01523 134 HDLVPGDICLLKTGDTIPADLRLIETKNF----DTDEALLTGESLPVIKDAHATFGK---EE---------DTPIGDRIN 197 (1053)
T ss_pred hhCCCCCEEEECCCCEeeccEEEEEeCce----EEEchhhcCCCCceeccccccccc---cc---------cCCcccCCC
Confidence 99999999999999999999999998765 599999999999999986431100 00 000011222
Q ss_pred ceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccC---CC-----C-C---------------
Q 001087 167 YTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSM---NI-----P-S--------------- 222 (1159)
Q Consensus 167 ~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~---~~-----~-~--------------- 222 (1159)
..|+||.+.+|+ +.|+|+.||.+|.+++... .. + .
T Consensus 198 ~lf~GT~V~~G~---------------------g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (1053)
T TIGR01523 198 LAFSSSAVTKGR---------------------AKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWIL 256 (1053)
T ss_pred ccccCceEEeee---------------------EEEEEEEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccc
Confidence 456666665555 9999999999996644332 11 0 0
Q ss_pred --------------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHH
Q 001087 223 --------------KRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFV 288 (1159)
Q Consensus 223 --------------k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1159)
.+||+|++++++..+++.+.++++++.++...+ . + ..
T Consensus 257 ~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~--~---~------------------------~~ 307 (1053)
T TIGR01523 257 KVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF--D---V------------------------DK 307 (1053)
T ss_pred cccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--h---h------------------------hH
Confidence 149999999999999888888777765543211 0 0 01
Q ss_pred HHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceE
Q 001087 289 LNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 368 (1159)
Q Consensus 289 ~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~ 368 (1159)
..++.++.+.+.+||++||++++++.+++ +++| +++++++|+++.+|+||++++||+|||||||+|+|+
T Consensus 308 ~~~~~av~l~Va~VPegLp~~vti~La~g-~~rM----------ak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~ 376 (1053)
T TIGR01523 308 EVAIYAICLAISIIPESLIAVLSITMAMG-AANM----------SKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMI 376 (1053)
T ss_pred HHHHHHHHHHHHHcccchHHHHHHHHHHH-HHHH----------HhcCCEeccchhhhhccCccEEEecCcCccccceEE
Confidence 25566789999999999999999999999 9999 889999999999999999999999999999999999
Q ss_pred EEEEEECCE-eecCCchhhhhhhhhccCC--CCcccccchhhhccCCCCCCChhhhhcc-----ccC---CCChhhHHHH
Q 001087 369 FFKCSIGGE-IYGTGITEIERGVAQQTGM--KIPEVERSVKAVHEKGFNFDDPRLLRGA-----WRN---EHNPDACKEF 437 (1159)
Q Consensus 369 ~~~~~i~~~-~y~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~ 437 (1159)
++++++++. .|......... .+..+. .......... ......+....... ..+ ........++
T Consensus 377 V~~i~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 450 (1053)
T TIGR01523 377 ARQIWIPRFGTISIDNSDDAF--NPNEGNVSGIPRFSPYEY----SHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKL 450 (1053)
T ss_pred EEEEEEcCCceEEecCCCCCC--CCcccccccccccccccc----cccccccccccccccccccccccccccccHHHHHH
Confidence 999998752 23211000000 000000 0000000000 00000000000000 000 0012345678
Q ss_pred HHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEee-cCc--------e-EEEEeccccccCccceEEE
Q 001087 438 FRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRR-TPT--------M-IYVRESHVEKMGKMQDVCY 507 (1159)
Q Consensus 438 ~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r-~~~--------~-i~i~~~~~~~~~~~~~~~~ 507 (1159)
+.+.++||++....+++.+... ..+||+|.||+.+|.+.|+..... +.+ . ..+.... .+.....|
T Consensus 451 l~~~~lcn~a~~~~~~~~~~~~-~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 525 (1053)
T TIGR01523 451 LETAALANIATVFKDDATDCWK-AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHN----EKPGSAQF 525 (1053)
T ss_pred HHHHHhccCCeeeccCCCCcee-eCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccccccccccc----cccccccc
Confidence 9999999998765432222221 358999999999999999743100 000 0 0000000 00013468
Q ss_pred EEeEeecCCCCCceEEEEEEcCCC-cEEEEEecchhHHHHHhhcC-----------ChhhHHHHHHHHHHHhhcCCeEEE
Q 001087 508 EILNVLEFNSTRKRQSVVCRYADG-RLVLYCKGADSVIYERLANG-----------NEDLKKVTREHLEQFGSSGLRTLC 575 (1159)
Q Consensus 508 ~il~~~~F~s~rkrmsviv~~~~g-~~~l~~KGA~~~i~~~~~~~-----------~~~~~~~~~~~l~~~a~~GlRtL~ 575 (1159)
++++.+||||+|||||++++++++ ++++|+|||||+|+++|+.. +++.++.+.+++++|+++|+|||+
T Consensus 526 ~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa 605 (1053)
T TIGR01523 526 EFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLA 605 (1053)
T ss_pred ceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEE
Confidence 999999999999999999997655 58999999999999999741 223467788899999999999999
Q ss_pred EEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 576 LAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 576 ~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
+|||+++++++..+ .+. ....+| +.+|+||+|+|+++++||+|+||+++|+.|++|||+|||+|||+
T Consensus 606 ~A~r~l~~~~~~~~--~~~---~~~~~~--------~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~ 672 (1053)
T TIGR01523 606 FASKSFDKADNNDD--QLK---NETLNR--------ATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDF 672 (1053)
T ss_pred EEEEECCchhccch--hhh---ccccch--------hhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCC
Confidence 99999987654221 110 000111 45799999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEccc
Q 001087 656 METAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGK 735 (1159)
Q Consensus 656 ~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~ 735 (1159)
++||.+||++|||++++.. .. .+ ......+++|+
T Consensus 673 ~~tA~~iA~~~Gi~~~~~~---~~-~~------------------------------------------~~~~~~vitG~ 706 (1053)
T TIGR01523 673 PETAKAIAQEVGIIPPNFI---HD-RD------------------------------------------EIMDSMVMTGS 706 (1053)
T ss_pred HHHHHHHHHHcCCCCcccc---cc-cc------------------------------------------ccccceeeehH
Confidence 9999999999999865311 00 00 00123699999
Q ss_pred chhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee--cCccchh
Q 001087 736 CLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI--SGQEGMQ 813 (1159)
Q Consensus 736 ~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi--sg~e~~q 813 (1159)
+++.+.++++++... +..||||++|+||.++|+.+ |+.|++|+|+|||+||+|||++|||||++ +|+|.
T Consensus 707 ~l~~l~~~~l~~~~~------~~~V~ar~sP~~K~~iV~~l-q~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v-- 777 (1053)
T TIGR01523 707 QFDALSDEEVDDLKA------LCLVIARCAPQTKVKMIEAL-HRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV-- 777 (1053)
T ss_pred HhhhcCHHHHHHHhh------cCeEEEecCHHHHHHHHHHH-HhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHH--
Confidence 999887766654332 34699999999999999999 67799999999999999999999999965 68888
Q ss_pred hhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc--chhhHHHHHHHhhhhh
Q 001087 814 AVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQR--FYDDWFQSLYNVIFTS 890 (1159)
Q Consensus 814 A~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~--~~~~~~l~~~n~i~t~ 890 (1159)
|+++||+++.+++|.... ++.|||++|+|+++++.|.+++|+..+++.+++.++..++|.+ +++++|++|+|+++++
T Consensus 778 ak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~ 857 (1053)
T TIGR01523 778 AKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSC 857 (1053)
T ss_pred HHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHH
Confidence 999999999998887776 7999999999999999999999999999999999998887764 4789999999999999
Q ss_pred hHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hccCC--cc-CCC-----Ccc
Q 001087 891 MPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSAT--GQ-NSS-----GKI 961 (1159)
Q Consensus 891 lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~~~--~~-~~~-----g~~ 961 (1159)
+|++++|+.++ ++++|.++|+ .+...+++++.++.+++.|++.+++.+..++ .++.. +. ... +..
T Consensus 858 ~palaL~~e~~--~~~~m~~~Pr----~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1053)
T TIGR01523 858 FPAMGLGLEKA--APDLMDRLPH----DNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAG 931 (1053)
T ss_pred HHHHhhccCCC--ChhHHhcCCC----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccccccccc
Confidence 99999998544 8899999998 4566799998888888999998877665444 21110 00 000 000
Q ss_pred -cccccchhHHHHHHHHHHHHHHHHhhcc-----ch-----------------hhHHHHHHHHHHHHHHHHHHHhhccCC
Q 001087 962 -FGIWDVSTMAFTCVVVTVNLRLLMMCNT-----IT-----------------RFHYITVGGSILAWFLFVFLYTGIMTP 1018 (1159)
Q Consensus 962 -~~~~~~~~~~~~~~v~~~~~~~~l~~~~-----~~-----------------~~~~~~i~~si~~~~~~~~~~~~~~~~ 1018 (1159)
.+.....|+.|+++++...++. +.+++ |+ .+.+..++.++++.+++.++..++|+
T Consensus 932 ~~~~~~a~t~~f~~l~~~~~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~- 1009 (1053)
T TIGR01523 932 CNDVFKARSAAFATMTFCALILA-VEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPV- 1009 (1053)
T ss_pred ccchhhhHHHHHHHHHHHHHHHH-HHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhh-
Confidence 1234457888888888777764 33332 21 13566777777777777766666653
Q ss_pred CCCCCceeeE-eeeec-cchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001087 1019 NDRQENVFFV-IFVLM-STFYFYFTLILVPVLALLGDFIFQGVQRWF 1063 (1159)
Q Consensus 1019 ~~~~~~~~~~-~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~ 1063 (1159)
++. +|++. .++ .|+.++.++++.++.+.++|+++|++
T Consensus 1010 -------~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 1010 -------INDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred -------hhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 343 67776 554 78888888888888999999988755
No 8
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.5e-108 Score=1049.61 Aligned_cols=860 Identities=21% Similarity=0.225 Sum_probs=646.3
Q ss_pred hhhhHHHHHHHHHHhhcc-ccc------ccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhh---ccceEEEeeCCeEE
Q 001087 13 RRVANCYFLMISILSTTP-MSP------VNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTI---NSTPVEVLQGQRWV 82 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~-~s~------~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~---n~~~~~V~r~g~~~ 82 (1159)
+.+.++++++.++++++. +.+ ..|+..++.++ +++++++...+++++..++.+.+ .+.+++|+|||+++
T Consensus 6 ~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~-vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~~~ 84 (917)
T TIGR01116 6 EDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILL-ILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDGRWS 84 (917)
T ss_pred hCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEE
Confidence 778899999999999987 332 35556655444 44455555888888888775544 46789999999999
Q ss_pred EeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCC
Q 001087 83 SIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQP 162 (1159)
Q Consensus 83 ~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p 162 (1159)
+++++||+|||||.|++||.||||++|+++++ |+||||+|||||.|+.|.+.....
T Consensus 85 ~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~-------------------- 140 (917)
T TIGR01116 85 VIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPD-------------------- 140 (917)
T ss_pred EEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCc--------------------
Confidence 99999999999999999999999999999764 579999999999999998753210
Q ss_pred CCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhh---ccCCCCCCcCHHHHHHHHHHHHHH
Q 001087 163 NNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKLILALF 239 (1159)
Q Consensus 163 n~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~l~ 239 (1159)
....+.+.+|++++||.+.+ |++.|+|++||.+|++++ +...++.++||+|++++++...++
T Consensus 141 --------------~~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~ 205 (917)
T TIGR01116 141 --------------ERAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLS 205 (917)
T ss_pred --------------cccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHH
Confidence 00123455678888888875 679999999999997764 556677889999999999999988
Q ss_pred HHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhh
Q 001087 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQST 319 (1159)
Q Consensus 240 ~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~ 319 (1159)
.+.++++++.+++...+ |..... ....+...+..+..++++++.+||++||++++++++++ +
T Consensus 206 ~~~~~~~~i~~~~~~~~------~~~~~~-----------~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~-~ 267 (917)
T TIGR01116 206 KVIGLICILVWVINIGH------FNDPAL-----------GGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALG-T 267 (917)
T ss_pred HHHHHHHHHHHHHHHHH------hccccc-----------cchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHH-H
Confidence 88777776655443221 110000 00011122335556788999999999999999999999 9
Q ss_pred hhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCc
Q 001087 320 QYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIP 399 (1159)
Q Consensus 320 ~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~ 399 (1159)
+++ .++++++|+++.+|+||++++||||||||||+|+|++.+++..+..+... .... .
T Consensus 268 ~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~-~~~~---~-------- 325 (917)
T TIGR01116 268 RKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL-NEFC---V-------- 325 (917)
T ss_pred HHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc-ceEE---e--------
Confidence 988 77899999999999999999999999999999999999998866432100 0000 0
Q ss_pred ccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEe-cCChhHHHHHHHHHHcC
Q 001087 400 EVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQ-AASPDEAALVTAAKNFG 478 (1159)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~-~~spdE~Alv~~a~~~g 478 (1159)
...++.+.+....+.......+.....++++++++||++.+..+++.+ .|+ .+||+|.||++++++.|
T Consensus 326 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~--~~~~~gdp~E~ALl~~~~~~g 394 (917)
T TIGR01116 326 ---------TGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKG--VYEKVGEATEAALKVLVEKMG 394 (917)
T ss_pred ---------cCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCC--ceeeccChhHHHHHHHHHHcC
Confidence 000011000000000000011223466789999999998775433222 233 48999999999999999
Q ss_pred cEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhc--------
Q 001087 479 FFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLAN-------- 550 (1159)
Q Consensus 479 ~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~-------- 550 (1159)
+....+.++.+.....+.. ...+..|++++.+||||+|||||++++. ++++++|+|||||.|+++|+.
T Consensus 395 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~ 470 (917)
T TIGR01116 395 LPATKNGVSSKRRPALGCN---SVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRA 470 (917)
T ss_pred CCchhcccccccccccchh---HHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCe
Confidence 8776554444333211100 0013568899999999999999999986 477899999999999999974
Q ss_pred --CChhhHHHHHHHHHHHhh-cCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeec
Q 001087 551 --GNEDLKKVTREHLEQFGS-SGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIE 627 (1159)
Q Consensus 551 --~~~~~~~~~~~~l~~~a~-~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ie 627 (1159)
.+++..+.+.+++++|++ +|+|||++|||.+++++... . ..+ +...+.+|+||+|+|+++++
T Consensus 471 ~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~-~---------~~~-----~~~~~~~e~~l~~lGl~~~~ 535 (917)
T TIGR01116 471 VPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREED-L---------LSD-----PANFEAIESDLTFIGVVGML 535 (917)
T ss_pred eeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCcccccc-c---------ccc-----chhhhhhcCCcEEEEEeeee
Confidence 113456778889999999 99999999999997643211 0 011 11235689999999999999
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
||+|+||+++|+.|++|||++||+|||+.+||.+||++||+..++.++
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v-------------------------------- 583 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDV-------------------------------- 583 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccc--------------------------------
Confidence 999999999999999999999999999999999999999998654221
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEe
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 787 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~i 787 (1159)
...+++|+++..+.++++.. ..++.+||||++|+||.++|+.+ |..|++|+||
T Consensus 584 --------------------~~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~K~~iV~~l-q~~g~~va~i 636 (917)
T TIGR01116 584 --------------------TFKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSHKSELVELL-QEQGEIVAMT 636 (917)
T ss_pred --------------------cceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHHHHHHHHHH-HhcCCeEEEe
Confidence 12356777776655444322 23467899999999999999999 5789999999
Q ss_pred cCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 788 GDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFT 865 (1159)
Q Consensus 788 GDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~ 865 (1159)
|||+||+|||++|||||++ +|+|. |+.+||+++.+++|.... ++.|||++|+|+++++.|.+++|+..+++++++.
T Consensus 637 GDG~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 714 (917)
T TIGR01116 637 GDGVNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTA 714 (917)
T ss_pred cCCcchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 9999999999999999999 78887 889999999997776655 6899999999999999999999999999999998
Q ss_pred HhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHH
Q 001087 866 FQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYN 945 (1159)
Q Consensus 866 ~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~ 945 (1159)
++.. ..+|++++++|+|++++++|+++++.+++ ++++|.++|+ .+++++++++.++.|++.|++++++.++
T Consensus 715 ~~~~---~~pl~~~qll~inli~d~lp~~~l~~~~~--~~~~m~~pP~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~ 785 (917)
T TIGR01116 715 ALGI---PEGLIPVQLLWVNLVTDGLPATALGFNPP--DKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYVGLATVG 785 (917)
T ss_pred HHcC---CchHHHHHHHHHHHHHHHHHHHHHhcCCc--chhHhcCCCC----CCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 8731 24689999999999999999999998776 6899999997 5677899999999999999999988554
Q ss_pred HHH-hccCCcc-CC-----------CCcc----cccccchhHHHHHHHHHHHHHHHHhhccc--h-----hhHHHHHHHH
Q 001087 946 CVT-TSSATGQ-NS-----------SGKI----FGIWDVSTMAFTCVVVTVNLRLLMMCNTI--T-----RFHYITVGGS 1001 (1159)
Q Consensus 946 ~~~-~~~~~~~-~~-----------~g~~----~~~~~~~~~~~~~~v~~~~~~~~l~~~~~--~-----~~~~~~i~~s 1001 (1159)
.+. .+....+ .. ++.. .+.....|++|+++++...++.. .+++. + .+.+..+|++
T Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~-~~r~~~~~~~~~~~~~n~~~~~~ 864 (917)
T TIGR01116 786 GFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNAL-NALSEDQSLLRMPPWVNKWLIGA 864 (917)
T ss_pred HHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHH-HHcCCcccccccCCccCHHHHHH
Confidence 443 2211011 00 1100 01234568899999888877743 44432 1 1345667777
Q ss_pred HHHHHHHHHHHhhccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 1002 ILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGVQR 1061 (1159)
Q Consensus 1002 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~~ 1061 (1159)
+++.++++++..++|+ ++.+|++. .++..|+.++.++++.++.+.++|+++|
T Consensus 865 ~~~~~~l~~~~~~v~~--------~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 865 ICLSMALHFLILYVPF--------LSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHHHHHHHHHhHH--------HHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7777776666656542 35667777 8899999999999999999999998764
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=6.3e-107 Score=1042.95 Aligned_cols=845 Identities=19% Similarity=0.210 Sum_probs=638.3
Q ss_pred hhhhHHHHHHHHHHhhcc--cc--------cccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhcc---ceEEEeeCC
Q 001087 13 RRVANCYFLMISILSTTP--MS--------PVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINS---TPVEVLQGQ 79 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~--~s--------~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~---~~~~V~r~g 79 (1159)
..+.++.+++.++++++. +. ...|+. .++++++++++++..+++++|++++++.+++ .+++|+|||
T Consensus 71 ~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~-~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg 149 (997)
T TIGR01106 71 FGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYL-GVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDG 149 (997)
T ss_pred hcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECC
Confidence 555666666666665543 11 123333 4568888889999999999999998877664 589999999
Q ss_pred eEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEe
Q 001087 80 RWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQC 159 (1159)
Q Consensus 80 ~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~ 159 (1159)
++++|+++||+|||||.|++||.||||++|+++++ |.||||+|||||.|+.|.+.+..
T Consensus 150 ~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LTGES~pv~K~~~~~~------------------ 207 (997)
T TIGR01106 150 EKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLTGESEPQTRSPEFTH------------------ 207 (997)
T ss_pred EEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccCCCCCceeccCCCcc------------------
Confidence 99999999999999999999999999999999865 46999999999999999874311
Q ss_pred cCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccC---CCCCCcCHHHHHHHHHHH
Q 001087 160 EQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSM---NIPSKRSTLERKLDKLIL 236 (1159)
Q Consensus 160 e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~---~~~~k~s~l~~~~n~~~~ 236 (1159)
..|++.+|++++||.+. .|++.|+|++||.+|+++++.. ..+.+++|+++.++++..
T Consensus 208 -------------------~~~~~~~n~l~~Gt~v~-~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~ 267 (997)
T TIGR01106 208 -------------------ENPLETRNIAFFSTNCV-EGTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIH 267 (997)
T ss_pred -------------------cCccccCCeEEeccEee-eeeEEEEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHH
Confidence 12445566677776666 3569999999999998876654 556678999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHH
Q 001087 237 ALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFF 316 (1159)
Q Consensus 237 ~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~ 316 (1159)
.+..+.++++++.++++.+.. ..| ...+..++.+++.+||++||++++++..+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~--~~~-------------------------~~~~~~~i~v~v~~iP~~L~~~v~i~l~~ 320 (997)
T TIGR01106 268 IITGVAVFLGVSFFILSLILG--YTW-------------------------LEAVIFLIGIIVANVPEGLLATVTVCLTL 320 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCH-------------------------HHHHHHHHHHHhhcCCccchHHHHHHHHH
Confidence 988888777766555443221 111 12455667788888999999999999999
Q ss_pred hhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCC
Q 001087 317 QSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGM 396 (1159)
Q Consensus 317 ~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~ 396 (1159)
+ +.++ .++++++|+++.+|+||+|++||||||||||+|+|+|.++++++..|..+..+..
T Consensus 321 ~-~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~--------- 380 (997)
T TIGR01106 321 T-AKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQ--------- 380 (997)
T ss_pred H-HHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCC---------
Confidence 9 8888 7889999999999999999999999999999999999999999887753210000
Q ss_pred CCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCC--CceEEecCChhHHHHHHHH
Q 001087 397 KIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESP--ERITYQAASPDEAALVTAA 474 (1159)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~--~~~~y~~~spdE~Alv~~a 474 (1159)
.+.. ........+.+++++++||++.+..+.+. ..-.+..+||+|.||+++|
T Consensus 381 --------------~~~~------------~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a 434 (997)
T TIGR01106 381 --------------SGVS------------FDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCI 434 (997)
T ss_pred --------------CCcc------------CCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHH
Confidence 0000 00111234578889999999876543211 0112456899999999999
Q ss_pred HHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcC---CCcEEEEEecchhHHHHHhhc-
Q 001087 475 KNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYA---DGRLVLYCKGADSVIYERLAN- 550 (1159)
Q Consensus 475 ~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~g~~~l~~KGA~~~i~~~~~~- 550 (1159)
.+.+.... + .+..|+.+..+||+|+||||+++++.. ++++++|+|||||+|+++|+.
T Consensus 435 ~~~~~~~~----------~---------~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~ 495 (997)
T TIGR01106 435 ELCLGSVM----------E---------MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSI 495 (997)
T ss_pred HHhCCCHH----------H---------HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHH
Confidence 86543210 0 134678899999999999999988643 256899999999999999963
Q ss_pred --------CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHH-HHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEE
Q 001087 551 --------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYER-WNEKFIQAKSSLRDREQKLDEVAELIEKDLTLI 621 (1159)
Q Consensus 551 --------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~-~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~ll 621 (1159)
.+++.++.+.+++++|+++|+|||++|||+++++++.+ |.. +++ ..+.+|+||+|+
T Consensus 496 ~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~----------~~~-----~~~~~e~~L~fl 560 (997)
T TIGR01106 496 LIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQF----------DTD-----DVNFPTDNLCFV 560 (997)
T ss_pred hcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccc----------cch-----hhhccccCcEEE
Confidence 12345677888999999999999999999998765432 211 010 013458999999
Q ss_pred EEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHH
Q 001087 622 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFM 701 (1159)
Q Consensus 622 G~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 701 (1159)
|+++++||+|++|+++|+.|+++||++||+|||+..||.++|+++|+++++... ..+
T Consensus 561 Gli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~------~~~----------------- 617 (997)
T TIGR01106 561 GLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNET------VED----------------- 617 (997)
T ss_pred EEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccc------hhh-----------------
Confidence 999999999999999999999999999999999999999999999999765321 000
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC
Q 001087 702 REEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR 781 (1159)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g 781 (1159)
+.+++....+. ........++++|++++.+.++++ .++...|+.+||||++|+||++||+.+ |+.|
T Consensus 618 ---i~~~~~~~~~~------~~~~~~~~~vi~G~~l~~l~~~el----~~~~~~~~~~VfaR~sPeqK~~IV~~l-q~~g 683 (997)
T TIGR01106 618 ---IAARLNIPVSQ------VNPRDAKACVVHGSDLKDMTSEQL----DEILKYHTEIVFARTSPQQKLIIVEGC-QRQG 683 (997)
T ss_pred ---hhhhccccccc------cccccccceEEEhHHhhhCCHHHH----HHHHHhcCCEEEEECCHHHHHHHHHHH-HHCC
Confidence 00000000000 001122358999999999877654 445556677899999999999999999 6789
Q ss_pred cEEEEecCCccCHHHHHhccccee--ecCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 001087 782 KITLSIGDGANDVSMIQAAHIGVG--ISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFT 858 (1159)
Q Consensus 782 ~~vl~iGDG~NDv~mL~~AdVGIg--isg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~ 858 (1159)
++|+|+|||+||+|||++|||||+ ++|+|+ |+++||++|.+++|.... ++.|||++|.|+++++.|.+++|+..+
T Consensus 684 ~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--ak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~ 761 (997)
T TIGR01106 684 AIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEI 761 (997)
T ss_pred CEEEEECCCcccHHHHhhCCcceecCCcccHH--HHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 999999999999999999999995 478999 899999999998888877 799999999999999999999999999
Q ss_pred HHHHHHHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHH-HHH
Q 001087 859 LTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAF-FSV 937 (1159)
Q Consensus 859 ~~~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~-~~~ 937 (1159)
++.+++.++..+ .+++++|++|+|++++++|+++++..+ +++++|.++|+ ..+...+++++.++.|++ .|+
T Consensus 762 ~~~~~~~~~~~~---~pl~~~qlL~inli~d~lp~~al~~e~--~~~~~m~~~P~---~~~~~~l~~~~~~~~~~~~~g~ 833 (997)
T TIGR01106 762 TPFLIFIIANIP---LPLGTITILCIDLGTDMVPAISLAYEK--AESDIMKRQPR---NPKTDKLVNERLISMAYGQIGM 833 (997)
T ss_pred HHHHHHHHHcCc---chhHHHHHHHHHHHHHHHHHHHHhcCC--CCcccccCCCc---CCccccccCHHHHHHHHHHHHH
Confidence 999999888543 357899999999999999999999844 48899999998 224568899888877654 588
Q ss_pred HHHHHHHHHHH-hccCCc------cC-----C----CCc--ccc-----------cccchhHHHHHHHHHHHHHHHHhhc
Q 001087 938 YQSLVLYNCVT-TSSATG------QN-----S----SGK--IFG-----------IWDVSTMAFTCVVVTVNLRLLMMCN 988 (1159)
Q Consensus 938 ~~s~vif~~~~-~~~~~~------~~-----~----~g~--~~~-----------~~~~~~~~~~~~v~~~~~~~~l~~~ 988 (1159)
+++++.|+.++ .++..+ +. . ++. ..+ .+...|++|+.+++...++.. .++
T Consensus 834 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~-~~R 912 (997)
T TIGR01106 834 IQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLI-ICK 912 (997)
T ss_pred HHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHH-Hhc
Confidence 88887776655 221100 00 0 000 000 014578889998888877744 333
Q ss_pred cc--hh----hHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 989 TI--TR----FHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGVQR 1061 (1159)
Q Consensus 989 ~~--~~----~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~~ 1061 (1159)
+. +. +.+..++.++++.+++..+..++| .++.++++. .++..|+.++.+.++.++.+.+.|+++|
T Consensus 913 ~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p--------~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r 984 (997)
T TIGR01106 913 TRRNSVFQQGMKNKILIFGLFEETALAAFLSYCP--------GMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIR 984 (997)
T ss_pred cCcccccccCCcCHHHHHHHHHHHHHHHHHHHhh--------hhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 11 345566666665555555444443 235567777 7889999999999988999999998887
Q ss_pred hh
Q 001087 1062 WF 1063 (1159)
Q Consensus 1062 ~~ 1063 (1159)
.+
T Consensus 985 ~~ 986 (997)
T TIGR01106 985 RN 986 (997)
T ss_pred hC
Confidence 64
No 10
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-108 Score=947.68 Aligned_cols=819 Identities=23% Similarity=0.262 Sum_probs=631.6
Q ss_pred HHhh--hhhhHHHHHHHHHHhhcc-c----ccccccchhhhHHHHHHHHHHHHHHHHHHHhhh----hHhhccceEEEee
Q 001087 9 GCLN--RRVANCYFLMISILSTTP-M----SPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQN----DMTINSTPVEVLQ 77 (1159)
Q Consensus 9 ~L~~--~~~~n~yfl~i~il~~i~-~----s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~----d~~~n~~~~~V~r 77 (1159)
++|| +...-+...+.|++++.. + .+.+||.....++.|+++-.+ .++.||++.++ +++..+.++.|+|
T Consensus 148 fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~V-tA~nDy~qe~QF~~L~~~k~~~k~~ViR 226 (1034)
T KOG0204|consen 148 FVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLV-TAVNDYRQELQFRKLQKEKRNIKFQVIR 226 (1034)
T ss_pred HHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEE-eecchhHHhhhhhhhhhhhhceEEEEEE
Confidence 3455 555555556666666643 2 344888877665554443322 44555555555 4555578899999
Q ss_pred CCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEE
Q 001087 78 GQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEV 157 (1159)
Q Consensus 78 ~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i 157 (1159)
||+.++|+..||+||||+.|+.||.+|||++++++++.+ ||||+|||||+++.|....
T Consensus 227 ~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~----iDESSlTGESd~v~k~~~~------------------ 284 (1034)
T KOG0204|consen 227 GGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLK----IDESSLTGESDHVQKSLDK------------------ 284 (1034)
T ss_pred CCEEEEEEEeeeeeccEEEeecCCccccceEEEecccee----EecccccCCCcceeccCCC------------------
Confidence 999999999999999999999999999999999998876 9999999999999997643
Q ss_pred EecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHH
Q 001087 158 QCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKL 234 (1159)
Q Consensus 158 ~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~ 234 (1159)
+.+.++||.+++|. +.++|+.+|.+|.. |.........+||+|-+++++
T Consensus 285 -------dPfLlSGTkv~eGs---------------------gkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~l 336 (1034)
T KOG0204|consen 285 -------DPFLLSGTKVMEGS---------------------GKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGL 336 (1034)
T ss_pred -------CCeEeecceeecCc---------------------ceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHH
Confidence 33788899998888 99999999999954 555556666789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccc-cccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHH
Q 001087 235 ILALFATLTVMCLICAIGSAIFIDKK-HYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETI 313 (1159)
Q Consensus 235 ~~~l~~~~~~l~~i~~i~~~~~~~~~-~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~ 313 (1159)
+..+..+.++++.+..++..+..-.. .+-.+. . ..-.+......++..|..++.+++.++|++||+++++.
T Consensus 337 A~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~-------~-~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLs 408 (1034)
T KOG0204|consen 337 ATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGG-------T-GTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLS 408 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhheeeecCCC-------C-CccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHH
Confidence 99888887777776665544321100 000000 0 00112222334445677788899999999999999999
Q ss_pred HHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhc
Q 001087 314 KFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQ 393 (1159)
Q Consensus 314 ~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~ 393 (1159)
.++. .++|. +.++++|.++++|++|+.+.||+|||||||.|.|++.+.++++..|..+.+. .
T Consensus 409 LAys-~kkMm----------kD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~-~------ 470 (1034)
T KOG0204|consen 409 LAYS-MKKMM----------KDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPK-S------ 470 (1034)
T ss_pred HHHH-HHHHh----------cchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcc-c------
Confidence 9999 88773 4567899999999999999999999999999999999999999887643211 0
Q ss_pred cCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHH
Q 001087 394 TGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTA 473 (1159)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~ 473 (1159)
..-.+.....++.+++...+-....++..+...-+.+||+|.||+.+
T Consensus 471 ---------------------------------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f 517 (1034)
T KOG0204|consen 471 ---------------------------------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGF 517 (1034)
T ss_pred ---------------------------------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHH
Confidence 00111223344555555444333333333333445699999999999
Q ss_pred HHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhc---
Q 001087 474 AKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLAN--- 550 (1159)
Q Consensus 474 a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~--- 550 (1159)
+.++|..|.. .+.+.++++++||||.||||+++++.++|..++|+|||.|.++.+|..
T Consensus 518 ~~~LG~~~~~-------------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~ 578 (1034)
T KOG0204|consen 518 GLKLGMDFQD-------------------VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYID 578 (1034)
T ss_pred HHHhCcchHh-------------------hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheEC
Confidence 9999987632 245678999999999999999999998887239999999999999986
Q ss_pred -------CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHH--HHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEE
Q 001087 551 -------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPD--MYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLI 621 (1159)
Q Consensus 551 -------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~--e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~ll 621 (1159)
-+++....+++.++.||++||||+|+|||+..+. +..+|.. .+..+.||+++
T Consensus 579 ~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-------------------~~~~~~~lt~l 639 (1034)
T KOG0204|consen 579 SNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-------------------EELPEGGLTLL 639 (1034)
T ss_pred CCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc-------------------cccCCCCeEEE
Confidence 1234456788999999999999999999996543 1122211 14568999999
Q ss_pred EEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHH
Q 001087 622 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFM 701 (1159)
Q Consensus 622 G~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 701 (1159)
|++||+||.|||||++|+.|++|||+|.|+||||..||.+||.+|||++++..
T Consensus 640 aivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d--------------------------- 692 (1034)
T KOG0204|consen 640 AIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD--------------------------- 692 (1034)
T ss_pred EEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc---------------------------
Confidence 99999999999999999999999999999999999999999999999987632
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC
Q 001087 702 REEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR 781 (1159)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g 781 (1159)
-++++|+++..+.+++..+...+|. |.+|.||.+|..+|+.+ +..|
T Consensus 693 ---------------------------~~~lEG~eFr~~s~ee~~~i~pkl~------VlARSSP~DK~lLVk~L-~~~g 738 (1034)
T KOG0204|consen 693 ---------------------------FLALEGKEFRELSQEERDKIWPKLR------VLARSSPNDKHLLVKGL-IKQG 738 (1034)
T ss_pred ---------------------------cceecchhhhhcCHHHHHhhhhhhe------eeecCCCchHHHHHHHH-HhcC
Confidence 3478899998888888888888775 99999999999999999 5889
Q ss_pred cEEEEecCCccCHHHHHhcccce--eecCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 001087 782 KITLSIGDGANDVSMIQAAHIGV--GISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFT 858 (1159)
Q Consensus 782 ~~vl~iGDG~NDv~mL~~AdVGI--gisg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~ 858 (1159)
++|+.+|||.||+|||++||||. ||+|+|. |+++||++|+|++|.++. .+.+||..|.+|+|+++|.+.-|++..
T Consensus 739 ~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAl 816 (1034)
T KOG0204|consen 739 EVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVAL 816 (1034)
T ss_pred cEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEee
Confidence 99999999999999999999999 7799999 999999999999999988 899999999999999999999999999
Q ss_pred HHHHHHHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHH
Q 001087 859 LTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVY 938 (1159)
Q Consensus 859 ~~~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~ 938 (1159)
++.|..++.. +.+++...||+|.|++++.|.+++|+.+++ ++++|+|.|. |++.++++..+|-..+.+++|
T Consensus 817 iv~fv~A~~~---~dsPLtAVQlLWVNLIMDTLgALALATepP--t~~Lm~RkP~----GR~~~LIt~tMwknil~qa~Y 887 (1034)
T KOG0204|consen 817 IVNFVSACAT---GDSPLTAVQLLWVNLIMDTLGALALATEPP--TDELMKRKPV----GRTKPLITRTMWKNILGQAVY 887 (1034)
T ss_pred hhhhhhhhhc---CCccHHHHHHHHHHHHHHHHHHHHhccCCC--ChHHhcCCCC----CCCCcchHHHHHHHHHHHHHH
Confidence 9999888775 567899999999999999999999997665 7889999999 999999999999999999999
Q ss_pred HHHHHHHHHHhccCCccCCCCccc-ccccchhHHHHHHHHHHHHHHHHhhcc------ch-hhHHHHHHHHHHHHHHHHH
Q 001087 939 QSLVLYNCVTTSSATGQNSSGKIF-GIWDVSTMAFTCVVVTVNLRLLMMCNT------IT-RFHYITVGGSILAWFLFVF 1010 (1159)
Q Consensus 939 ~s~vif~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~v~~~~~~~~l~~~~------~~-~~~~~~i~~si~~~~~~~~ 1010 (1159)
|-+++|.+.+. ....+..+|... ......|++|.++|+.+.+.-. ..+. |. .+++..+.+-+.+.++++.
T Consensus 888 Ql~vl~iL~F~-G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEi-naRki~~~NvFkgi~~N~~F~~ii~~T~v~Qv 965 (1034)
T KOG0204|consen 888 QLIVLFILNFA-GKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEI-NARKIDERNVFKGIFRNRLFCVIITITVVSQV 965 (1034)
T ss_pred HHHHHHHHHhc-chhhhccCCCCCCchhhheeeehhHHHHHHHHHHH-hhcchhHHhHHHHHhcCceEEEEeeeeeehhh
Confidence 99999988771 111111222221 1224456677777766655532 2222 21 1223333334444455554
Q ss_pred HHhhccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 1011 LYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGV 1059 (1159)
Q Consensus 1011 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~ 1059 (1159)
++..+ .+.++.+. .++..|++++++.++.++...+.|.+
T Consensus 966 iIveF----------~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 966 IIVEF----------GGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred hhhhh----------cCcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 44322 23456666 89999999999998888887777644
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1e-104 Score=1020.54 Aligned_cols=804 Identities=21% Similarity=0.253 Sum_probs=616.2
Q ss_pred hhhhHHHHHHHHHHhhcc--ccc--------ccccchh---hhHHHHHHHHHHHHHHHHHHHhhhhHhhccceEEEeeCC
Q 001087 13 RRVANCYFLMISILSTTP--MSP--------VNPVTNV---VPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQ 79 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~--~s~--------~~~~~~~---~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~~~~~V~r~g 79 (1159)
+.+.++++++.++++++. ..| .+|+..+ ++++++++++++++..++++.++.++..++.+++|+|||
T Consensus 95 ~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG 174 (941)
T TIGR01517 95 SDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGG 174 (941)
T ss_pred hCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECC
Confidence 677888888888888873 111 2455543 444555667777788777777776666678899999999
Q ss_pred eEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEe
Q 001087 80 RWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQC 159 (1159)
Q Consensus 80 ~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~ 159 (1159)
++++|++++|+|||||.|++||.||||++|+++++ +.||||+|||||.|+.|.+.+..
T Consensus 175 ~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~----l~VdES~LTGES~pv~K~~~~~n------------------ 232 (941)
T TIGR01517 175 QEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLS----LEIDESSITGESDPIKKGAPKDS------------------ 232 (941)
T ss_pred EEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCc----EEEEecccCCCCCcccccCCCCc------------------
Confidence 99999999999999999999999999999998644 56999999999999999864311
Q ss_pred cCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchh---hhhccCCCCCCcCHHHHHHHHHHH
Q 001087 160 EQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETK---VMMNSMNIPSKRSTLERKLDKLIL 236 (1159)
Q Consensus 160 e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk---~~~n~~~~~~k~s~l~~~~n~~~~ 236 (1159)
..|+||.+.+|. +.|+|++||.+|. ++++....+ +++|+++.++++..
T Consensus 233 -------~v~~GT~v~~G~---------------------~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~ 283 (941)
T TIGR01517 233 -------FLLSGTVVNEGS---------------------GRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAG 283 (941)
T ss_pred -------eEEeCCeEEeeE---------------------EEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHH
Confidence 457777776666 9999999999994 444554444 46799999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhh-hccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHH
Q 001087 237 ALFATLTVMCLICAIGSAIF-IDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKF 315 (1159)
Q Consensus 237 ~l~~~~~~l~~i~~i~~~~~-~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~ 315 (1159)
.+..+.++++++.++++.+. .....|.. . ..+......+...+..++.+++.+||++|+++++++..
T Consensus 284 ~~~~~~l~~~~i~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~ 351 (941)
T TIGR01517 284 LIGKFGMGSAVLLFLVLSLRYVFRIIRGD---G---------RDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALA 351 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccc---c---------cccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHH
Confidence 88887777776665544321 00000000 0 00100112234478889999999999999999999999
Q ss_pred HhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccC
Q 001087 316 FQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTG 395 (1159)
Q Consensus 316 ~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 395 (1159)
.+ +.++ .++++++|+++.+|+||++++||||||||||+|+|++++++..+..|+...
T Consensus 352 ~~-~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~------------ 408 (941)
T TIGR01517 352 YS-MKKM----------MKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD------------ 408 (941)
T ss_pred HH-HHHH----------HhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc------------
Confidence 98 8877 789999999999999999999999999999999999999987665443210
Q ss_pred CCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHH
Q 001087 396 MKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAK 475 (1159)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~ 475 (1159)
. . .. .+....+++...+.||+..+...++.+ ..+..+||+|.|++++++
T Consensus 409 -----------------~-------~-----~~-~~~~~~~~l~~~~~~~s~~~~~~~~~~-~~~~~g~p~e~All~~~~ 457 (941)
T TIGR01517 409 -----------------V-------L-----RN-VPKHVRNILVEGISLNSSSEEVVDRGG-KRAFIGSKTECALLGFLL 457 (941)
T ss_pred -----------------c-------c-----cc-CCHHHHHHHHHHHHhCCCCccccCCCC-ccccCCCccHHHHHHHHH
Confidence 0 0 00 011234455555556555443211111 234569999999999999
Q ss_pred HcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhc----C
Q 001087 476 NFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLAN----G 551 (1159)
Q Consensus 476 ~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~----~ 551 (1159)
+.|..... .+..|++++.+||+|+||||+++++.+++++++|+||||+.|+++|+. +
T Consensus 458 ~~~~~~~~-------------------~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~ 518 (941)
T TIGR01517 458 LLGRDYQE-------------------VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSN 518 (941)
T ss_pred HcCCCHHH-------------------HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcC
Confidence 87743200 123567888999999999999999987788999999999999999964 1
Q ss_pred Ch-----hhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeee
Q 001087 552 NE-----DLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAI 626 (1159)
Q Consensus 552 ~~-----~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~i 626 (1159)
+. +.++.+.+++++|+++|+||+++|||+++.+++..| +..|+||+|+|++++
T Consensus 519 g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~----------------------~~~e~~l~~lGli~~ 576 (941)
T TIGR01517 519 GEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK----------------------DYPNGGLTLIGVVGI 576 (941)
T ss_pred CCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc----------------------cccccCcEEEEEeec
Confidence 11 134667888999999999999999999976554322 234789999999999
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHH
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVK 706 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (1159)
+|++|++++++|+.|++||||+||+|||+++||.+||++|||.+++.
T Consensus 577 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~--------------------------------- 623 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG--------------------------------- 623 (941)
T ss_pred cCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc---------------------------------
Confidence 99999999999999999999999999999999999999999986431
Q ss_pred HHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEE
Q 001087 707 RELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLS 786 (1159)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~ 786 (1159)
.+++|+++..+.++++.+.+. +..||||++|+||.++|+.+ |+.|++|+|
T Consensus 624 -----------------------~vi~G~~~~~l~~~el~~~i~------~~~Vfar~sPe~K~~iV~~l-q~~g~vVam 673 (941)
T TIGR01517 624 -----------------------LAMEGKEFRRLVYEEMDPILP------KLRVLARSSPLDKQLLVLML-KDMGEVVAV 673 (941)
T ss_pred -----------------------eEeeHHHhhhCCHHHHHHHhc------cCeEEEECCHHHHHHHHHHH-HHCCCEEEE
Confidence 268888888777666655443 44699999999999999999 678999999
Q ss_pred ecCCccCHHHHHhcccceee--cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 787 IGDGANDVSMIQAAHIGVGI--SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFW 863 (1159)
Q Consensus 787 iGDG~NDv~mL~~AdVGIgi--sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~ 863 (1159)
||||+||+|||++|||||++ +|+|+ |+++||++|.+++|.... ++.|||++|+|+++++.|.+++|+...++.++
T Consensus 674 ~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~ 751 (941)
T TIGR01517 674 TGDGTNDAPALKLADVGFSMGISGTEV--AKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFV 751 (941)
T ss_pred ECCCCchHHHHHhCCcceecCCCccHH--HHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999966 68898 999999999998887766 78999999999999999999999999999998
Q ss_pred HHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHH
Q 001087 864 FTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVL 943 (1159)
Q Consensus 864 ~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vi 943 (1159)
+.++.+ ..+++++|++|+|++++++|+++++...+ ++++|.++|. .+..+++++..+..|++.|++++++.
T Consensus 752 ~~~~~~---~~pl~~~qil~inl~~d~~~al~l~~e~~--~~~lm~~~P~----~~~~~li~~~~~~~i~~~~~~~~~~~ 822 (941)
T TIGR01517 752 GSCISS---TSPLTAVQLLWVNLIMDTLAALALATEPP--TEALLDRKPI----GRNAPLISRSMWKNILGQAGYQLVVT 822 (941)
T ss_pred HHHHhc---cccHHHHHHHHHHHHHHHhhHHHHccCCc--cHHHHhCCCC----CCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 888753 45689999999999999999999996544 7888989997 56677899999999999999999887
Q ss_pred HHHHH-hccCCccCC-CC-cccccccchhHHHHHHHHHHHHHHHHhhcc------c-hhhHHHHHHHHHHHHHHHHHHHh
Q 001087 944 YNCVT-TSSATGQNS-SG-KIFGIWDVSTMAFTCVVVTVNLRLLMMCNT------I-TRFHYITVGGSILAWFLFVFLYT 1013 (1159)
Q Consensus 944 f~~~~-~~~~~~~~~-~g-~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~------~-~~~~~~~i~~si~~~~~~~~~~~ 1013 (1159)
|++.+ ......... ++ .........|++|.++++...++... +++ | .++++..+|.++++.+++++++.
T Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~-~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~ 901 (941)
T TIGR01517 823 FILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEIN-ARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIV 901 (941)
T ss_pred HHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHH-HccCCcccccccccccHHHHHHHHHHHHHHHHHH
Confidence 76655 211000000 00 00012345688888888887777543 222 2 22456667776666666665544
Q ss_pred hccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 1014 GIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGV 1059 (1159)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~ 1059 (1159)
.. .+.+|++. .++..|+.+++++++.++...+.|.+
T Consensus 902 ~~----------~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 902 EF----------GGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HH----------HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 21 23456666 78899999999988888888777765
No 12
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2.6e-99 Score=964.81 Aligned_cols=791 Identities=20% Similarity=0.216 Sum_probs=602.4
Q ss_pred HHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhh---ccceEEEeeCCeEEEeeccCcccce
Q 001087 17 NCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTI---NSTPVEVLQGQRWVSIPWRKLQVGD 93 (1159)
Q Consensus 17 n~yfl~i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~---n~~~~~V~r~g~~~~i~~~~l~vGD 93 (1159)
++.+++.++++++- ..|..+++.+ +++++.++..++++++..++.+.+ ++.+++|+|||++++|+++||+|||
T Consensus 64 ~~~L~~aa~ls~~~---g~~~~~~~i~-~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GD 139 (884)
T TIGR01522 64 ILLLIASAVISVFM---GNIDDAVSIT-LAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGD 139 (884)
T ss_pred HHHHHHHHHHHHHH---cchhhHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCC
Confidence 33344444444432 3444544433 334444555888888888776554 4678999999999999999999999
Q ss_pred EEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEE
Q 001087 94 IVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNL 173 (1159)
Q Consensus 94 IV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~ 173 (1159)
||.|++||.||||++|+++++. .||||+|||||.|+.|.+.+..... ..+..+.+...|+||.
T Consensus 140 iv~l~~Gd~IPaDg~ii~g~~l----~VDES~LTGES~pv~K~~~~~~~~~-------------~~~~~~~~n~v~~GT~ 202 (884)
T TIGR01522 140 LVCLSVGDRVPADLRIVEAVDL----SIDESNLTGETTPVSKVTAPIPAAT-------------NGDLAERSNIAFMGTL 202 (884)
T ss_pred EEEecCCCEEeeeEEEEEcCce----EEEcccccCCCcceecccccccccc-------------cccccccCceEEeCCE
Confidence 9999999999999999997654 5999999999999999986532100 0111123335566666
Q ss_pred EEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhh---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 174 IMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKLILALFATLTVMCLICA 250 (1159)
Q Consensus 174 ~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~ 250 (1159)
+.+|. +.++|++||.+|.+++ ........++|+++.++++..++.++.++++++.+
T Consensus 203 v~~G~---------------------~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~ 261 (884)
T TIGR01522 203 VRCGH---------------------GKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVIC 261 (884)
T ss_pred EEeee---------------------EEEEEEEecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665 9999999999996544 33455566899999999999988776655544433
Q ss_pred HHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhcccccccc
Q 001087 251 IGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYH 330 (1159)
Q Consensus 251 i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~ 330 (1159)
++.. +.. ..| ...+..++.+++.+||++||++++++..++ +.++
T Consensus 262 ~~~~-~~~-~~~-------------------------~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~-~~r~-------- 305 (884)
T TIGR01522 262 LVGW-FQG-KDW-------------------------LEMFTISVSLAVAAIPEGLPIIVTVTLALG-VLRM-------- 305 (884)
T ss_pred HHHH-Hhc-CCH-------------------------HHHHHHHHHHHHHHccchHHHHHHHHHHHH-HHHH--------
Confidence 3221 111 111 226677889999999999999999999999 8888
Q ss_pred ccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecC-CchhhhhhhhhccCCCCcccccchhhhc
Q 001087 331 AESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGT-GITEIERGVAQQTGMKIPEVERSVKAVH 409 (1159)
Q Consensus 331 ~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (1159)
+++++++|+++.+|+||++++||||||||||+|+|++.+++..+..+.. .....+ ..
T Consensus 306 --ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~----~~---------------- 363 (884)
T TIGR01522 306 --SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLN----QF---------------- 363 (884)
T ss_pred --hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccC----CC----------------
Confidence 7899999999999999999999999999999999999999876543211 000000 00
Q ss_pred cCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceE
Q 001087 410 EKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMI 489 (1159)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i 489 (1159)
..+..++ .......+....+++.+.++||++..+..+ ++ ..+||+|.|+++++++.|+..
T Consensus 364 -~~~~~~~------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--~~---~~g~p~e~All~~~~~~~~~~-------- 423 (884)
T TIGR01522 364 -GEVIVDG------DVLHGFYTVAVSRILEAGNLCNNAKFRNEA--DT---LLGNPTDVALIELLMKFGLDD-------- 423 (884)
T ss_pred -Ccccccc------cccccccCHHHHHHHHHHhhhCCCeecCCC--CC---cCCChHHHHHHHHHHHcCcHh--------
Confidence 0000000 000011123466788899999998654322 11 137999999999999887631
Q ss_pred EEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcC-CCcEEEEEecchhHHHHHhhcC----------ChhhHHH
Q 001087 490 YVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYA-DGRLVLYCKGADSVIYERLANG----------NEDLKKV 558 (1159)
Q Consensus 490 ~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~g~~~l~~KGA~~~i~~~~~~~----------~~~~~~~ 558 (1159)
....|+.++.+||+|.||||+++++.+ ++++++|+|||||.|+++|... +++.++.
T Consensus 424 -------------~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~ 490 (884)
T TIGR01522 424 -------------LRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDV 490 (884)
T ss_pred -------------HHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHH
Confidence 123577889999999999999999864 5678999999999999999641 1234566
Q ss_pred HHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHH
Q 001087 559 TREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACI 638 (1159)
Q Consensus 559 ~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI 638 (1159)
+.+++++++.+|+|++++|||++ ++||+|+|+++++|++|+|++++|
T Consensus 491 i~~~~~~~a~~G~rvl~~A~~~~---------------------------------~~~l~~lGli~l~Dp~r~~~~~~i 537 (884)
T TIGR01522 491 IQEEAAEMASAGLRVIAFASGPE---------------------------------KGQLTFLGLVGINDPPRPGVKEAV 537 (884)
T ss_pred HHHHHHHHHhcCCEEEEEEEEcC---------------------------------CCCeEEEEEEeccCcchhHHHHHH
Confidence 78888999999999999999875 358999999999999999999999
Q ss_pred HHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhh
Q 001087 639 ETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQ 718 (1159)
Q Consensus 639 ~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 718 (1159)
+.|+++||+++|+|||+.+||.+||++|||.+....
T Consensus 538 ~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~-------------------------------------------- 573 (884)
T TIGR01522 538 TTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ-------------------------------------------- 573 (884)
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc--------------------------------------------
Confidence 999999999999999999999999999999754311
Q ss_pred hccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHH
Q 001087 719 YIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQ 798 (1159)
Q Consensus 719 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~ 798 (1159)
+++|+++..+.++++++.+. +..||||++|+||..+|+.+ |+.|++|+|||||+||+|||+
T Consensus 574 ------------~v~g~~l~~~~~~~l~~~~~------~~~Vfar~~P~~K~~iv~~l-q~~g~~v~mvGDGvND~pAl~ 634 (884)
T TIGR01522 574 ------------SVSGEKLDAMDDQQLSQIVP------KVAVFARASPEHKMKIVKAL-QKRGDVVAMTGDGVNDAPALK 634 (884)
T ss_pred ------------eeEhHHhHhCCHHHHHHHhh------cCeEEEECCHHHHHHHHHHH-HHCCCEEEEECCCcccHHHHH
Confidence 45677776665555555433 45699999999999999999 677999999999999999999
Q ss_pred hcccceee--cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 001087 799 AAHIGVGI--SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRF 875 (1159)
Q Consensus 799 ~AdVGIgi--sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~ 875 (1159)
+|||||++ +|++. |+.+||+++.++++.... ++.+||.+|+|+++++.|.++.|+...++.+++.++. ...+
T Consensus 635 ~AdVGia~g~~g~~v--a~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~p 709 (884)
T TIGR01522 635 LADIGVAMGQTGTDV--AKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMG---FPNP 709 (884)
T ss_pred hCCeeEecCCCcCHH--HHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc---CCCc
Confidence 99999988 35666 779999999999998877 7999999999999999999999999888877766663 3346
Q ss_pred hhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 001087 876 YDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQ 955 (1159)
Q Consensus 876 ~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~~~~~~~~ 955 (1159)
++++|++|+|++++.+|+++++..++ ++++|.++|+ .++.+++++..+..|++.|+++.++.++.+......
T Consensus 710 l~~~qiL~inl~~d~~~a~~l~~e~~--~~~~m~~~P~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-- 781 (884)
T TIGR01522 710 LNAMQILWINILMDGPPAQSLGVEPV--DKDVMRKPPR----PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD-- 781 (884)
T ss_pred hhHHHHHHHHHHHHhhHHHHhccCCC--ChhHhhCCCC----CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--
Confidence 89999999999999999999997444 7899999997 677889999999999999999887766554421111
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHhhcc-----c--hhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeE
Q 001087 956 NSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNT-----I--TRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFV 1028 (1159)
Q Consensus 956 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~-----~--~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1159)
|. ......|++|.++++...++.. .+++ | .++++..+|+++++.++++++..++|+ ...
T Consensus 782 ---~~--~~~~~~t~~f~~~v~~q~~~~~-~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~--------~~~ 847 (884)
T TIGR01522 782 ---GV--ITARDTTMTFTCFVFFDMFNAL-ACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPP--------LQS 847 (884)
T ss_pred ---Cc--chhhHHHHHHHHHHHHHHHHHH-HHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHH--------HHH
Confidence 10 1123457888888887777743 3333 2 124567788887777777766666542 345
Q ss_pred eeeec-cchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001087 1029 IFVLM-STFYFYFTLILVPVLALLGDFIFQGVQRWF 1063 (1159)
Q Consensus 1029 ~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~ 1063 (1159)
+|++. .++..|+.+++++++.++.+.++|+++|.+
T Consensus 848 ~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 848 VFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred HHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 66666 789999999999999999999999988764
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=4.3e-97 Score=958.23 Aligned_cols=733 Identities=19% Similarity=0.231 Sum_probs=535.5
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhc--cceEEEeeCCeEEEeeccCcccceEEEEc--cCCccCceEEEEe
Q 001087 36 PVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTIN--STPVEVLQGQRWVSIPWRKLQVGDIVMVK--QDGFFPADLLFLA 111 (1159)
Q Consensus 36 ~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n--~~~~~V~r~g~~~~i~~~~l~vGDIV~v~--~ge~iPAD~~lL~ 111 (1159)
|+.+++.+ ++++++.+...++.++..++.+++. +..++|+|||++++|+++||+|||||.|+ +|+.+|||++|++
T Consensus 193 ~~~~~~i~-~i~~~~~~~~~~~~~k~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~ 271 (1054)
T TIGR01657 193 YYYSLCIV-FMSSTSISLSVYQIRKQMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS 271 (1054)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe
Confidence 44444433 4444555557777777776666554 56899999999999999999999999999 9999999999997
Q ss_pred ecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeecc
Q 001087 112 STNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRG 191 (1159)
Q Consensus 112 ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrG 191 (1159)
|.|.||||+|||||.|+.|.+.+.... +.+. +.+ .+.+.+|++++|
T Consensus 272 -----g~~~VdES~LTGES~Pv~K~~~~~~~~--~~~~-------~~~--------------------~~~~~~~~lf~G 317 (1054)
T TIGR01657 272 -----GSCIVNESMLTGESVPVLKFPIPDNGD--DDED-------LFL--------------------YETSKKHVLFGG 317 (1054)
T ss_pred -----CcEEEecccccCCccceecccCCcccc--cccc-------ccc--------------------cccccceEEEcC
Confidence 457899999999999999988653100 0000 000 112334455555
Q ss_pred ceeec------CCcEEEEEEEeccch---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q 001087 192 CSLRN------TEYIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHY 262 (1159)
Q Consensus 192 s~l~n------t~~i~gvVv~tG~~T---k~~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~w 262 (1159)
|.+.. +|.+.|+|++||.+| ++.+....++.+.+++++.+.+++.+++.+.++.+++..+ .++..+ .
T Consensus 318 T~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~-~~~~~~-~-- 393 (1054)
T TIGR01657 318 TKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTII-ELIKDG-R-- 393 (1054)
T ss_pred CEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcC-C--
Confidence 55542 356999999999999 5555555566677899999988887766554433322211 111111 1
Q ss_pred cccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCC
Q 001087 263 YLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTS 342 (1159)
Q Consensus 263 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~ 342 (1159)
.....+++++.+++.+||++||++++++..++ +.++ ++++++||++
T Consensus 394 -----------------------~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~-~~rL----------~k~~il~~~~ 439 (1054)
T TIGR01657 394 -----------------------PLGKIILRSLDIITIVVPPALPAELSIGINNS-LARL----------KKKGIFCTSP 439 (1054)
T ss_pred -----------------------cHHHHHHHHHHHHHhhcCchHHHHHHHHHHHH-HHHH----------HHCCEEEcCc
Confidence 12237888999999999999999999999999 8888 7899999999
Q ss_pred cccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhh
Q 001087 343 NLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLR 422 (1159)
Q Consensus 343 ~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (1159)
+.+|.||+|+++|||||||||+|+|+|.+++..+...... . . .
T Consensus 440 ~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~-----~----~--------------------~-------- 482 (1054)
T TIGR01657 440 FRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFL-----K----I--------------------V-------- 482 (1054)
T ss_pred ccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccc-----c----c--------------------c--------
Confidence 9999999999999999999999999999987543210000 0 0 0
Q ss_pred ccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEe-ecCc---e--EEEEeccc
Q 001087 423 GAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYR-RTPT---M--IYVRESHV 496 (1159)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~-r~~~---~--i~i~~~~~ 496 (1159)
..........+..++++||++.... +. ..+||.|.|+++++ |+.+.. .+.. . ..+....
T Consensus 483 ----~~~~~~~~~~~~~~~a~C~~~~~~~----~~---~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~~- 547 (1054)
T TIGR01657 483 ----TEDSSLKPSITHKALATCHSLTKLE----GK---LVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTDD- 547 (1054)
T ss_pred ----ccccccCchHHHHHHHhCCeeEEEC----CE---EecCHHHHHHHHhC---CCEEECCCCcccccccccceeccC-
Confidence 0000012235667899999987542 21 35899999999974 565433 1100 0 0000000
Q ss_pred cccCccceEEEEEeEeecCCCCCceEEEEEEcCC-CcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEE
Q 001087 497 EKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD-GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLC 575 (1159)
Q Consensus 497 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~ 575 (1159)
....|++++.+||+|+||||||+++.++ +++++|+|||||.|+++|.+.. .++++.+.+++|+++|+|||+
T Consensus 548 ------~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~--~p~~~~~~~~~~a~~G~RVLa 619 (1054)
T TIGR01657 548 ------PPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET--VPSDYQEVLKSYTREGYRVLA 619 (1054)
T ss_pred ------CCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC--CChhHHHHHHHHHhcCCEEEE
Confidence 1257999999999999999999999764 5688999999999999998642 467788899999999999999
Q ss_pred EEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 576 LAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 576 ~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
+|||++++.++.++.+ .+ .+.+|+||+|+|+++++|++|++++++|+.|++|||++||+|||+
T Consensus 620 lA~k~l~~~~~~~~~~---------~~--------r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~ 682 (1054)
T TIGR01657 620 LAYKELPKLTLQKAQD---------LS--------RDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDN 682 (1054)
T ss_pred EEEeecCccchhhhhh---------cc--------HHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCC
Confidence 9999998543322211 12 256899999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHcCccccCceEEEEecCCcc------cchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceE
Q 001087 656 METAINIAYACNLINNEMKQFIITSETNA------IRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLA 729 (1159)
Q Consensus 656 ~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1159)
+.||.+||++|||++++..++..+..... ............ .... ........+. ........+.
T Consensus 683 ~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~----~~~~~~~~~~ 753 (1054)
T TIGR01657 683 PLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFA-STQV----EIPYPLGQDS----VEDLLASRYH 753 (1054)
T ss_pred HHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccc-cccc----cccCcccccc----hhhhcccceE
Confidence 99999999999999877555554321100 000000000000 0000 0000000000 0111224567
Q ss_pred EEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeecCc
Q 001087 730 LIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQ 809 (1159)
Q Consensus 730 lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~ 809 (1159)
++++|+++.++.+. ..+.+.++...| .||||++|+||.++|+.+ |+.|++|+|||||+||+||||+|||||++++.
T Consensus 754 ~~itG~~l~~l~~~-~~~~l~~~~~~~--~VfAR~sP~qK~~iV~~l-q~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~ 829 (1054)
T TIGR01657 754 LAMSGKAFAVLQAH-SPELLLRLLSHT--TVFARMAPDQKETLVELL-QKLDYTVGMCGDGANDCGALKQADVGISLSEA 829 (1054)
T ss_pred EEEEcHHHHHHHHh-hHHHHHHHHhcC--eEEEecCHHHHHHHHHHH-HhCCCeEEEEeCChHHHHHHHhcCcceeeccc
Confidence 99999999886532 123455555544 499999999999999999 67899999999999999999999999999877
Q ss_pred cchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHhhh
Q 001087 810 EGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIF 888 (1159)
Q Consensus 810 e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~~~l~~~n~i~ 888 (1159)
| |+.||||++.++++.... ++.+||.++.++.+++.|.+..+++..+..+...+. + ..+.++|++|.|+++
T Consensus 830 d---as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-~~l~~~Q~l~i~li~ 901 (1054)
T TIGR01657 830 E---ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLI----G-SNLGDGQFLTIDLLL 901 (1054)
T ss_pred c---ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----c-CcCccHHHHHHHHHH
Confidence 7 568999999999998877 799999999999999999999988775554433222 3 447899999999999
Q ss_pred hhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 889 TSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT 948 (1159)
Q Consensus 889 t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~ 948 (1159)
+.+|.++++..++ .++++.+.| ..+++++..+...+++++++.++.++...
T Consensus 902 ~~~~~l~l~~~~p--~~~l~~~~P-------~~~l~~~~~~~si~~q~~i~~~~~~~~~~ 952 (1054)
T TIGR01657 902 IFPVALLMSRNKP--LKKLSKERP-------PSNLFSVYILTSVLIQFVLHILSQVYLVF 952 (1054)
T ss_pred HHHHHHHHHcCCc--hhhcCCCCC-------CccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999997655 566777666 35799999999999999999988877766
No 14
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=7.2e-95 Score=918.34 Aligned_cols=779 Identities=16% Similarity=0.156 Sum_probs=564.7
Q ss_pred hhhhHHHHHHHHHHhhcc--ccc------ccccchhhhHHHHHHHHHHHHHHHHHHHhhhhH---hhccceEEEeeC---
Q 001087 13 RRVANCYFLMISILSTTP--MSP------VNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDM---TINSTPVEVLQG--- 78 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~--~s~------~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~---~~n~~~~~V~r~--- 78 (1159)
..+.++.+++.++++++. +.+ .+|...+ .++++++++++.+.+++++..++.+ ++.+.+++|+|+
T Consensus 80 ~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~-iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~ 158 (903)
T PRK15122 80 NNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVI-IILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHA 158 (903)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCcc
Confidence 334444555555666543 111 2344444 4555666666779999998877644 445688999999
Q ss_pred ---CeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccce
Q 001087 79 ---QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKG 155 (1159)
Q Consensus 79 ---g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g 155 (1159)
|++++|+.++|+|||||.|++||.||||++|+++++. .||||+|||||.|+.|.+.+........... .+
T Consensus 159 ~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~l----~VDES~LTGES~PV~K~~~~~~~~~~~~~~~---~~ 231 (903)
T PRK15122 159 GAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDL----FISQAVLTGEALPVEKYDTLGAVAGKSADAL---AD 231 (903)
T ss_pred CCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCce----EEEccccCCCCcceeeecccccccccccccc---cc
Confidence 4899999999999999999999999999999997663 5999999999999999863210000000000 00
Q ss_pred EEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhcc---CCCCCCcCHHHHHHH
Q 001087 156 EVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNS---MNIPSKRSTLERKLD 232 (1159)
Q Consensus 156 ~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~---~~~~~k~s~l~~~~n 232 (1159)
. ..+..+.....|+||.+.+|+ +.++|+.||.+|.+.+.. .. +...+++++.++
T Consensus 232 ~-~~~~~~~~n~vfaGT~V~~G~---------------------~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~ 288 (903)
T PRK15122 232 D-EGSLLDLPNICFMGTNVVSGT---------------------ATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVN 288 (903)
T ss_pred c-cCCcccccceEEeCCEEEeee---------------------EEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHH
Confidence 0 000001122445555555555 999999999999664433 33 445789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHH
Q 001087 233 KLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIET 312 (1159)
Q Consensus 233 ~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~ 312 (1159)
++...+..+.++++.+..++..+... . +...+..++.+++.+||++||+++++
T Consensus 289 ~i~~~l~~~~~~~~~~v~~~~~~~~~--~-------------------------~~~~l~~aisl~V~~~Pe~Lp~~vt~ 341 (903)
T PRK15122 289 SVSWLLIRFMLVMVPVVLLINGFTKG--D-------------------------WLEALLFALAVAVGLTPEMLPMIVSS 341 (903)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhccC--C-------------------------HHHHHHHHHHHHHHHccchHHHHHHH
Confidence 99888776666555444333221110 1 12267778999999999999999999
Q ss_pred HHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhh
Q 001087 313 IKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQ 392 (1159)
Q Consensus 313 ~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~ 392 (1159)
+...+ +.++ +++++++|+.+.+|+||++|+||||||||||+|+|++.+++..+. +
T Consensus 342 ~La~g-~~~m----------ak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~-~------------- 396 (903)
T PRK15122 342 NLAKG-AIAM----------ARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG-R------------- 396 (903)
T ss_pred HHHHH-HHHH----------HHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCC-C-------------
Confidence 99998 8877 789999999999999999999999999999999999988642110 0
Q ss_pred ccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHH
Q 001087 393 QTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVT 472 (1159)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~ 472 (1159)
.. .+++...++|.. .. . ..+||.|.|+++
T Consensus 397 -------------------------------------~~---~~~l~~a~l~s~-~~---~-------~~~~p~e~All~ 425 (903)
T PRK15122 397 -------------------------------------KD---ERVLQLAWLNSF-HQ---S-------GMKNLMDQAVVA 425 (903)
T ss_pred -------------------------------------Ch---HHHHHHHHHhCC-CC---C-------CCCChHHHHHHH
Confidence 00 123333333311 00 0 147999999999
Q ss_pred HHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcC-
Q 001087 473 AAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANG- 551 (1159)
Q Consensus 473 ~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~- 551 (1159)
+|.+.|... ....|+.+..+||+|.||||+++++.++|++++++|||++.|+++|+..
T Consensus 426 ~a~~~~~~~---------------------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~ 484 (903)
T PRK15122 426 FAEGNPEIV---------------------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR 484 (903)
T ss_pred HHHHcCchh---------------------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhh
Confidence 998876421 1234667788999999999999999878889999999999999999741
Q ss_pred --------ChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEE
Q 001087 552 --------NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGC 623 (1159)
Q Consensus 552 --------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~ 623 (1159)
+++.++.+.+.+++++.+|+|++++|||+++.++..++ ..+..|+||+|+|+
T Consensus 485 ~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~--------------------~~~~~e~~l~~lGl 544 (903)
T PRK15122 485 DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQ--------------------YSTADERDLVIRGF 544 (903)
T ss_pred cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccc--------------------cccccccCcEEEEE
Confidence 22345567788899999999999999999876432110 01235789999999
Q ss_pred eeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHH
Q 001087 624 TAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMRE 703 (1159)
Q Consensus 624 ~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 703 (1159)
++++||+|++++++|+.|+++||+++|+|||++.||.+||++|||..+.
T Consensus 545 i~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~------------------------------- 593 (903)
T PRK15122 545 LTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPGE------------------------------- 593 (903)
T ss_pred EeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-------------------------------
Confidence 9999999999999999999999999999999999999999999994211
Q ss_pred HHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcE
Q 001087 704 EVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKI 783 (1159)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~ 783 (1159)
+++|.+++.+.++++.+...+ ..||||++|+||.++|+.+ |+.|++
T Consensus 594 ---------------------------vi~G~el~~~~~~el~~~v~~------~~VfAr~sPe~K~~iV~~L-q~~G~v 639 (903)
T PRK15122 594 ---------------------------PLLGTEIEAMDDAALAREVEE------RTVFAKLTPLQKSRVLKAL-QANGHT 639 (903)
T ss_pred ---------------------------ccchHhhhhCCHHHHHHHhhh------CCEEEEeCHHHHHHHHHHH-HhCCCE
Confidence 577888887776666555443 3499999999999999999 678999
Q ss_pred EEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 784 TLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQ 861 (1159)
Q Consensus 784 vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~ 861 (1159)
|+|+|||+||+|||++|||||++ +|+|. |+++||+++.+++|.... ++.+||..|+|+++++.|.+..|+..+++.
T Consensus 640 VamtGDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~ 717 (903)
T PRK15122 640 VGFLGDGINDAPALRDADVGISVDSGADI--AKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSV 717 (903)
T ss_pred EEEECCCchhHHHHHhCCEEEEeCcccHH--HHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 99999999999999999999988 68888 999999999999998887 799999999999999999999999888877
Q ss_pred HHHHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHH
Q 001087 862 FWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSL 941 (1159)
Q Consensus 862 ~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~ 941 (1159)
++..++. +..++.+.|++|.|++++. |.++++..++ ++++| ++|+ .++.+++++..++ ..+.+.+.++
T Consensus 718 ~~~~~~~---~~~pl~~~qil~~nli~D~-~~lal~~d~~--~~~~m-~~P~----~~~~~~~~~~~~~-~g~~~~~~~~ 785 (903)
T PRK15122 718 LVASAFI---PFLPMLAIHLLLQNLMYDI-SQLSLPWDKM--DKEFL-RKPR----KWDAKNIGRFMLW-IGPTSSIFDI 785 (903)
T ss_pred HHHHHHh---ccchhHHHHHHHHHHHHHH-HHHhhcCCCC--CHhhc-CCCC----CCChhhhHHHHHH-HHHHHHHHHH
Confidence 7666653 2245789999999999995 9999987544 67788 9998 5666777764443 2222333333
Q ss_pred HHHHHHH-hccCCccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccc--hhhHHHHHHHHHHHHHHHHHHHhhccCC
Q 001087 942 VLYNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTI--TRFHYITVGGSILAWFLFVFLYTGIMTP 1018 (1159)
Q Consensus 942 vif~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~--~~~~~~~i~~si~~~~~~~~~~~~~~~~ 1018 (1159)
+.|++.+ .+. .+ ... ....+.+..|+.+++...+++ +.+++. .++.+...+..+++.+++.++..++|+
T Consensus 786 ~~~~~~~~~~~-~~----~~~-~~~~~~t~~f~~l~~~q~~~~-~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~- 857 (903)
T PRK15122 786 TTFALMWFVFA-AN----SVE-MQALFQSGWFIEGLLSQTLVV-HMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPF- 857 (903)
T ss_pred HHHHHHHHHhc-cC----cHh-hhhhhHHHHHHHHHHHHHHHH-HhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhH-
Confidence 3443322 221 11 000 001245667888888887774 344432 223344455555555555555455442
Q ss_pred CCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHH
Q 001087 1019 NDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQG 1058 (1159)
Q Consensus 1019 ~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~ 1058 (1159)
..++.+|++. +++.+|++++.++++.++...+.|.
T Consensus 858 -----~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~ 893 (903)
T PRK15122 858 -----SPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKR 893 (903)
T ss_pred -----HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1134566776 7889999998888777777767663
No 15
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1e-94 Score=915.28 Aligned_cols=754 Identities=16% Similarity=0.191 Sum_probs=552.6
Q ss_pred hhhhHHHHHH---HHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhh---hHhhccceEEEeeC------Ce
Q 001087 13 RRVANCYFLM---ISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQN---DMTINSTPVEVLQG------QR 80 (1159)
Q Consensus 13 ~~~~n~yfl~---i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~---d~~~n~~~~~V~r~------g~ 80 (1159)
+.+.|.+.++ .++++++. ..|...+ .++++++++.+.+.++++|..++ .+++.+.+++|+|+ |+
T Consensus 99 ~~~~~p~~~lL~~aa~ls~~~---~~~~~a~-~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~ 174 (902)
T PRK10517 99 VCYRNPFNILLTILGAISYAT---EDLFAAG-VIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENG 174 (902)
T ss_pred HHHHhHHHHHHHHHHHHHHHH---ccHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCe
Confidence 4555554444 44444432 3344444 45556666777788888888766 44455688999999 78
Q ss_pred EEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEec
Q 001087 81 WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCE 160 (1159)
Q Consensus 81 ~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e 160 (1159)
+++|++++|+|||||.|++||.||||++|+++++ ++||||+|||||.|+.|.+.+..... .+
T Consensus 175 ~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES~PV~K~~~~~~~~~--------------~~ 236 (902)
T PRK10517 175 WLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGESLPVEKFATTRQPEH--------------SN 236 (902)
T ss_pred EEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCCCceecccccccccc--------------cC
Confidence 9999999999999999999999999999999765 46999999999999999886532100 00
Q ss_pred CCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhh---ccCCCCCCcCHHHHHHHHHHHH
Q 001087 161 QPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKLILA 237 (1159)
Q Consensus 161 ~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~ 237 (1159)
.-+.+...|+||.+.+|. +.++|+.||.+|.+++ ....+..+++++++.++++..+
T Consensus 237 ~~~~~n~vfaGT~V~~G~---------------------~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~ 295 (902)
T PRK10517 237 PLECDTLCFMGTNVVSGT---------------------AQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWL 295 (902)
T ss_pred ccccccceeeCceEeeee---------------------EEEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHH
Confidence 001122456666665555 9999999999996644 4445667789999999999998
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHh
Q 001087 238 LFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQ 317 (1159)
Q Consensus 238 l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~ 317 (1159)
+..+.++++.+.++++.+... . +...+..++.+++.+||++||++++++...+
T Consensus 296 l~~~~~~~~~~v~~i~~~~~~--~-------------------------~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g 348 (902)
T PRK10517 296 LIRFMLVMAPVVLLINGYTKG--D-------------------------WWEAALFALSVAVGLTPEMLPMIVTSTLARG 348 (902)
T ss_pred HHHHHHHHHHHhhhHHHHhcC--C-------------------------HHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 888777777665444322111 1 1236777899999999999999999999998
Q ss_pred hhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCC
Q 001087 318 STQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMK 397 (1159)
Q Consensus 318 ~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~ 397 (1159)
+.++ +++++++|+++.+|+||++|+||||||||||+|+|++.++... .+.
T Consensus 349 -~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~---~~~---------------- 398 (902)
T PRK10517 349 -AVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI---SGK---------------- 398 (902)
T ss_pred -HHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC---CCC----------------
Confidence 8888 7899999999999999999999999999999999999875210 000
Q ss_pred CcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHc
Q 001087 398 IPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNF 477 (1159)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~ 477 (1159)
..+++++..++|.... . ..+||.|.|+++++...
T Consensus 399 -----------------------------------~~~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~ 432 (902)
T PRK10517 399 -----------------------------------TSERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEE 432 (902)
T ss_pred -----------------------------------CHHHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhc
Confidence 0123444444443221 1 13799999999998753
Q ss_pred CcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcC------
Q 001087 478 GFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANG------ 551 (1159)
Q Consensus 478 g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~------ 551 (1159)
+.. . ....|+.+..+||||+||||+++++.+++...+++|||++.|+++|+..
T Consensus 433 ~~~-------------~--------~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~ 491 (902)
T PRK10517 433 SAR-------------S--------LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEI 491 (902)
T ss_pred chh-------------h--------hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCe
Confidence 210 0 1245677888999999999999998877888999999999999999741
Q ss_pred ---ChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecc
Q 001087 552 ---NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIED 628 (1159)
Q Consensus 552 ---~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD 628 (1159)
+++..+.+.+..++++.+|+|++++|||+++.++. ++ ....|+|++|+|+++++|
T Consensus 492 ~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~-~~---------------------~~~~e~~l~~lGli~~~D 549 (902)
T PRK10517 492 VPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG-DY---------------------QRADESDLILEGYIAFLD 549 (902)
T ss_pred ecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc-cc---------------------ccccccCceeeehHhhhC
Confidence 12345667778899999999999999998865421 00 011378999999999999
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
|+|++++++|+.|+++||+|+|+|||++.||.+||++|||..+.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~------------------------------------ 593 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGE------------------------------------ 593 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccC------------------------------------
Confidence 99999999999999999999999999999999999999994211
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEec
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 788 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iG 788 (1159)
+++|.+++.+.++++.+...+ ..||||++|+||.++|+.+ |+.|++|+|+|
T Consensus 594 ----------------------v~~G~el~~l~~~el~~~~~~------~~VfAr~sPe~K~~IV~~L-q~~G~vVam~G 644 (902)
T PRK10517 594 ----------------------VLIGSDIETLSDDELANLAER------TTLFARLTPMHKERIVTLL-KREGHVVGFMG 644 (902)
T ss_pred ----------------------ceeHHHHHhCCHHHHHHHHhh------CcEEEEcCHHHHHHHHHHH-HHCCCEEEEEC
Confidence 567777777666665554443 3499999999999999999 67899999999
Q ss_pred CCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 789 DGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTF 866 (1159)
Q Consensus 789 DG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~ 866 (1159)
||+||+|||++|||||++ +|+|. |+++||++|.++++.... ++.+||..|+|+++++.|.+..|+..++..++..+
T Consensus 645 DGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~ 722 (902)
T PRK10517 645 DGINDAPALRAADIGISVDGAVDI--AREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASA 722 (902)
T ss_pred CCcchHHHHHhCCEEEEeCCcCHH--HHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999999988 77887 999999999999998877 79999999999999999999999999888887776
Q ss_pred hcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHH-HHHHHHHHHHHHHHH
Q 001087 867 QTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVA-IWAFFSVYQSLVLYN 945 (1159)
Q Consensus 867 ~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~-~~~~~~~~~s~vif~ 945 (1159)
+..| .++.+.|++|.|++++ +|.++++.++. ++++|.++|+ ++.+.+. ..++.|++.+++.+.
T Consensus 723 ~~~~---~pl~~~qiL~inl~~D-~~~~al~~d~~--~~~~m~~p~r----------~~~~~~~~~~~~~g~~~~~~~~~ 786 (902)
T PRK10517 723 FLPF---LPMLPLHLLIQNLLYD-VSQVAIPFDNV--DDEQIQKPQR----------WNPADLGRFMVFFGPISSIFDIL 786 (902)
T ss_pred Hhhh---hhhHHHHHHHHHHHHH-HhHHhhcCCCC--ChhhhcCCCC----------CCHHHHHHHHHHHHHHHHHHHHH
Confidence 6322 3588999999999999 79999987544 6778877665 1111122 123445554433332
Q ss_pred HHHh-ccCCccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccc--hhhHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 001087 946 CVTT-SSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTI--TRFHYITVGGSILAWFLFVFLYTGIMTPNDRQ 1022 (1159)
Q Consensus 946 ~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~--~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~ 1022 (1159)
.++. ++..... ... ....+.+..|+.+++...+.+. .+++. .++.+...|..+++.++..++..++|.
T Consensus 787 ~~~~~~~~~~~~-~~~--~~~~~~~~~F~~~~~~q~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----- 857 (902)
T PRK10517 787 TFCLMWWVFHAN-TPE--TQTLFQSGWFVVGLLSQTLIVH-MIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPF----- 857 (902)
T ss_pred HHHHHHHHcccc-chh--hHhHHHHHHHHHHHHHHHHHHH-hhccCCCCcccchHHHHHHHHHHHHHHHHHHhhH-----
Confidence 2221 1100000 000 0012334457777777777643 33433 334556677777766666655555541
Q ss_pred CceeeEeeeec-cc--hHHHHHHHHHHHH
Q 001087 1023 ENVFFVIFVLM-ST--FYFYFTLILVPVL 1048 (1159)
Q Consensus 1023 ~~~~~~~~~~~-~~--~~~w~~~l~~~~~ 1048 (1159)
+.++.++++. .+ ...|+.+++++.+
T Consensus 858 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 885 (902)
T PRK10517 858 -SPLASYLQLQALPLSYFPWLVAILAGYM 885 (902)
T ss_pred -HHHHHhhCCcCCChhHHHHHHHHHHHHH
Confidence 1234566666 44 4667776665555
No 16
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=2.5e-93 Score=903.97 Aligned_cols=751 Identities=17% Similarity=0.178 Sum_probs=548.6
Q ss_pred hhhhHHHH---HHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhh---hHhhccceEEEee------CCe
Q 001087 13 RRVANCYF---LMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQN---DMTINSTPVEVLQ------GQR 80 (1159)
Q Consensus 13 ~~~~n~yf---l~i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~---d~~~n~~~~~V~r------~g~ 80 (1159)
+.+.|.+. ++.++++++. ..|+..++ ++++++++++-+.+++++..++ .+++.+.+++|+| ||+
T Consensus 65 ~~~~~p~~~iL~~~a~ls~~~---~~~~~~~i-I~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~ 140 (867)
T TIGR01524 65 RAFNNPFIYILAMLMGVSYLT---DDLEATVI-IALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGS 140 (867)
T ss_pred HHHhhHHHHHHHHHHHHHHHH---hhHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCe
Confidence 44445444 4444444432 34444444 4455556666678888777655 3455568899999 999
Q ss_pred EEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEec
Q 001087 81 WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCE 160 (1159)
Q Consensus 81 ~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e 160 (1159)
+++|+.+||+|||||.|++||.||||++|+++++ +.||||+|||||.|+.|.+.+.... .. +
T Consensus 141 ~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES~PV~K~~~~~~~~---~~-----------~ 202 (867)
T TIGR01524 141 MDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGESLPVEKFVEDKRAR---DP-----------E 202 (867)
T ss_pred EEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCCCcccccCCccccc---cc-----------c
Confidence 9999999999999999999999999999999766 3599999999999999988653200 00 0
Q ss_pred CCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhh---ccCCCCCCcCHHHHHHHHHHHH
Q 001087 161 QPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKLILA 237 (1159)
Q Consensus 161 ~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~ 237 (1159)
..+.....|+||.+.+|. +.++|+.||.+|.+.+ .... +.+++++++.++++..+
T Consensus 203 ~~~~~n~vfaGT~v~~G~---------------------~~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~ 260 (867)
T TIGR01524 203 ILERENLCFMGTNVLSGH---------------------AQAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKL 260 (867)
T ss_pred ccccccceecCCeEEEeE---------------------EEEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHH
Confidence 011222456666666666 9999999999996643 3344 55679999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHh
Q 001087 238 LFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQ 317 (1159)
Q Consensus 238 l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~ 317 (1159)
+..+.++++++.++++.+... .| ...+..++.+++.+||++||++++++...+
T Consensus 261 ~~~~~~~~~~i~~~~~~~~~~--~~-------------------------~~~~~~al~l~v~~iP~~Lp~~vt~~la~g 313 (867)
T TIGR01524 261 LIRFMLVMVPVVLMINGLMKG--DW-------------------------LEAFLFALAVAVGLTPEMLPMIVSSNLAKG 313 (867)
T ss_pred HHHHHHHHHHHheehHHHhcC--CH-------------------------HHHHHHHHHHHHHhCcchHHHHHHHHHHHH
Confidence 888888777665544322111 11 226777889999999999999999999998
Q ss_pred hhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCC
Q 001087 318 STQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMK 397 (1159)
Q Consensus 318 ~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~ 397 (1159)
+.++ +++++++|+++.+|+||++++||||||||||+|+|++.++.... .
T Consensus 314 -~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~----~---------------- 362 (867)
T TIGR01524 314 -AINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSS----G---------------- 362 (867)
T ss_pred -HHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCC----C----------------
Confidence 8888 78999999999999999999999999999999999998863100 0
Q ss_pred CcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHc
Q 001087 398 IPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNF 477 (1159)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~ 477 (1159)
. ...+++...++|.... . ..+||.|.|+++++.+.
T Consensus 363 -------------------------------~---~~~~~l~~a~l~~~~~----~-------~~~~p~~~Al~~~~~~~ 397 (867)
T TIGR01524 363 -------------------------------E---TSERVLKMAWLNSYFQ----T-------GWKNVLDHAVLAKLDES 397 (867)
T ss_pred -------------------------------C---CHHHHHHHHHHhCCCC----C-------CCCChHHHHHHHHHHhh
Confidence 0 0123344444443210 0 13699999999998753
Q ss_pred CcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcC------
Q 001087 478 GFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANG------ 551 (1159)
Q Consensus 478 g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~------ 551 (1159)
+.. . ....|+.+..+||+|+||||+++++++++...+++|||++.|+++|+..
T Consensus 398 ~~~------------~---------~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~ 456 (867)
T TIGR01524 398 AAR------------Q---------TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAV 456 (867)
T ss_pred chh------------h---------HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCce
Confidence 211 0 1245677788999999999999998877678899999999999999741
Q ss_pred ---ChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecc
Q 001087 552 ---NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIED 628 (1159)
Q Consensus 552 ---~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD 628 (1159)
+++..+.+.+.+++++.+|+|++++|||+++.++.+ + .+..|+||+|+|+++++|
T Consensus 457 ~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~---------------------~~~~e~~l~~lGli~l~D 514 (867)
T TIGR01524 457 VTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-F---------------------TKTDEEQLIIEGFLGFLD 514 (867)
T ss_pred ecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-c---------------------cccccCCcEEEEEEEeeC
Confidence 123456678888999999999999999998764320 0 012378999999999999
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
|+|+|++++|++|+++||+++|+|||+..||.+||+++||.+++
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~------------------------------------ 558 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND------------------------------------ 558 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC------------------------------------
Confidence 99999999999999999999999999999999999999995321
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEec
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 788 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iG 788 (1159)
+++|.+++.+.++++.+... +..||||++|+||.++|+.+ |+.|++|+|+|
T Consensus 559 ----------------------v~~g~~l~~~~~~el~~~~~------~~~vfAr~~Pe~K~~iV~~l-q~~G~vVam~G 609 (867)
T TIGR01524 559 ----------------------FLLGADIEELSDEELARELR------KYHIFARLTPMQKSRIIGLL-KKAGHTVGFLG 609 (867)
T ss_pred ----------------------eeecHhhhhCCHHHHHHHhh------hCeEEEECCHHHHHHHHHHH-HhCCCEEEEEC
Confidence 45666666655555444333 33599999999999999999 67899999999
Q ss_pred CCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 789 DGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTF 866 (1159)
Q Consensus 789 DG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~ 866 (1159)
||+||+|||++|||||++ +|+|. |+++||+++.+++|.... ++.+||..|+|+++++.|.+..|+..++..++..+
T Consensus 610 DGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~ 687 (867)
T TIGR01524 610 DGINDAPALRKADVGISVDTAADI--AKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASA 687 (867)
T ss_pred CCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 999999999999999998 67887 999999999999998877 79999999999999999999999998888777666
Q ss_pred hcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHH---
Q 001087 867 QTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVL--- 943 (1159)
Q Consensus 867 ~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vi--- 943 (1159)
+. +..++.+.|++|.|++++ +|.++++..++ ++++|.++|+ . +.+. ....++..|++.+++.
T Consensus 688 ~~---~~~pl~~~qil~inl~~d-~~~~al~~~~~--~~~~m~~p~~-~----~~~~----~~~~~~~~g~~~~~~~~~~ 752 (867)
T TIGR01524 688 FI---PFLPMLSLHLLIQNLLYD-FSQLTLPWDKM--DREFLKKPHQ-W----EQKG----MGRFMLCIGPVSSIFDIAT 752 (867)
T ss_pred Hh---hhhhHHHHHHHHHHHHHH-HHHHhhcCCCC--ChHhhCCCCC-C----Chhh----HHHHHHHHHHHHHHHHHHH
Confidence 53 224589999999999999 79999997544 6777764443 2 1111 1222334455444333
Q ss_pred HHHHH-hccCCccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccc--hhhHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 001087 944 YNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTI--TRFHYITVGGSILAWFLFVFLYTGIMTPND 1020 (1159)
Q Consensus 944 f~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~--~~~~~~~i~~si~~~~~~~~~~~~~~~~~~ 1020 (1159)
|++.+ .+.. .+. .....+.+..|+.+++...+.+. .+|+. ..+.+...+..+++.+++.++..++|+.
T Consensus 753 ~~~~~~~~~~-----~~~-~~~~~~~t~~f~~~~~~~~~~~~-~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~-- 823 (867)
T TIGR01524 753 FLLMWFVFSA-----NTV-EEQALFQSGWFVVGLLSQTLVVH-MIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFS-- 823 (867)
T ss_pred HHHHHHHhcc-----cch-hhhhHHHHHHHHHHHHHHHHHHH-hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchh--
Confidence 32222 1110 010 01112456678888888877743 44443 2345566677777776666665555431
Q ss_pred CCCceeeEeeeec-c--chHHHHHHHHHHHH
Q 001087 1021 RQENVFFVIFVLM-S--TFYFYFTLILVPVL 1048 (1159)
Q Consensus 1021 ~~~~~~~~~~~~~-~--~~~~w~~~l~~~~~ 1048 (1159)
+++.+|++. . ++..|+.++.++.+
T Consensus 824 ----~~~~~f~~~~l~~~~~~~~~~~~~~~~ 850 (867)
T TIGR01524 824 ----PLGHSIGLVSLPLSYFPWLIAILVGYM 850 (867)
T ss_pred ----hhhhhhccccCCccHHHHHHHHHHHHH
Confidence 123455555 3 34457666665544
No 17
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=6.2e-89 Score=853.65 Aligned_cols=676 Identities=18% Similarity=0.227 Sum_probs=522.1
Q ss_pred hhhhHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHh---hccceEEEeeCCeEEEeeccCc
Q 001087 13 RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMT---INSTPVEVLQGQRWVSIPWRKL 89 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~---~n~~~~~V~r~g~~~~i~~~~l 89 (1159)
..+.++.+++.++++++. ..|...++ ++++++++++.+++++++..++.+. +.+.+++|+|||++++|+.+||
T Consensus 35 ~~~~~~lL~~aa~~s~~~---~~~~~~~~-i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~L 110 (755)
T TIGR01647 35 WNPLSWVMEAAAIIAIAL---ENWVDFVI-ILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASEL 110 (755)
T ss_pred hchHHHHHHHHHHHHHhh---cchhhhhh-hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhC
Confidence 444444455555565543 34555544 4455556666689999888876544 4578899999999999999999
Q ss_pred ccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCccee
Q 001087 90 QVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTF 169 (1159)
Q Consensus 90 ~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f 169 (1159)
+|||||.|++||.||||++++++++. .||||+|||||.|+.|.+.+ ..|
T Consensus 111 v~GDiV~l~~Gd~IPaDg~vi~g~~~----~VDeS~LTGES~PV~K~~~~---------------------------~v~ 159 (755)
T TIGR01647 111 VPGDVVRLKIGDIVPADCRLFEGDYI----QVDQAALTGESLPVTKKTGD---------------------------IAY 159 (755)
T ss_pred cCCCEEEECCCCEEeceEEEEecCce----EEEcccccCCccceEeccCC---------------------------eee
Confidence 99999999999999999999987653 59999999999999998754 459
Q ss_pred EEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhh---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHH
Q 001087 170 TGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKLILALFATLTVMC 246 (1159)
Q Consensus 170 ~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~ 246 (1159)
+||.+.+|. +.++|+.||.+|.+.+ ...+.+..++++|+.++++..++.++.++++
T Consensus 160 aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~ 218 (755)
T TIGR01647 160 SGSTVKQGE---------------------AEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLV 218 (755)
T ss_pred ccCEEEccE---------------------EEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 9999999999996644 4445566679999999999999988888877
Q ss_pred HHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhcccc
Q 001087 247 LICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDL 326 (1159)
Q Consensus 247 ~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~ 326 (1159)
++.++++.+... .. +...+..++.+++.+||++||++++++...+ +.++
T Consensus 219 ~i~~~~~~~~~~-~~-------------------------~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g-~~r~---- 267 (755)
T TIGR01647 219 LIELVVLFFGRG-ES-------------------------FREGLQFALVLLVGGIPIAMPAVLSVTMAVG-AAEL---- 267 (755)
T ss_pred HHHHHHHHHHcC-CC-------------------------HHHHHHHHHHHHHHhCCcchHHHHHHHHHHH-HHHH----
Confidence 776655433111 11 1236777899999999999999999999999 8888
Q ss_pred ccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchh
Q 001087 327 HMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVK 406 (1159)
Q Consensus 327 ~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1159)
+++++++|+.+.+|+||.+|+||||||||||+|+|++.+++..+..+
T Consensus 268 ------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~--------------------------- 314 (755)
T TIGR01647 268 ------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF--------------------------- 314 (755)
T ss_pred ------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCC---------------------------
Confidence 78999999999999999999999999999999999999986532100
Q ss_pred hhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecC
Q 001087 407 AVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTP 486 (1159)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~ 486 (1159)
...++++..++|+. + ..+||.|.|+++++++.+-
T Consensus 315 --------------------------~~~~~l~~a~~~~~------~-------~~~~pi~~Ai~~~~~~~~~------- 348 (755)
T TIGR01647 315 --------------------------DKDDVLLYAALASR------E-------EDQDAIDTAVLGSAKDLKE------- 348 (755)
T ss_pred --------------------------CHHHHHHHHHHhCC------C-------CCCChHHHHHHHHHHHhHH-------
Confidence 01134555555542 1 1369999999999876431
Q ss_pred ceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCC-CcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHH
Q 001087 487 TMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD-GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQ 565 (1159)
Q Consensus 487 ~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~ 565 (1159)
....|++++.+||+|.+|+|+++++.++ |+.++++|||++.|+++|+.. .+..+.+.+.+++
T Consensus 349 ----------------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-~~~~~~~~~~~~~ 411 (755)
T TIGR01647 349 ----------------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-KEIEEKVEEKVDE 411 (755)
T ss_pred ----------------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-HHHHHHHHHHHHH
Confidence 1234677888999999999999998764 778889999999999999753 2456677888999
Q ss_pred HhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcC
Q 001087 566 FGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAG 645 (1159)
Q Consensus 566 ~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aG 645 (1159)
++.+|+|++++|+|+ .|++|+|+|+++++||+|+|++++|+.|+++|
T Consensus 412 ~~~~G~rvl~vA~~~---------------------------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aG 458 (755)
T TIGR01647 412 LASRGYRALGVARTD---------------------------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLG 458 (755)
T ss_pred HHhCCCEEEEEEEEc---------------------------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCC
Confidence 999999999999972 14799999999999999999999999999999
Q ss_pred CeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCC
Q 001087 646 IKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISG 725 (1159)
Q Consensus 646 IkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (1159)
|+++|+|||++.||.+||++|||.++. ++.+.
T Consensus 459 I~v~miTGD~~~tA~~IA~~lGI~~~~-----~~~~~------------------------------------------- 490 (755)
T TIGR01647 459 VEVKMVTGDHLAIAKETARRLGLGTNI-----YTADV------------------------------------------- 490 (755)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCC-----cCHHH-------------------------------------------
Confidence 999999999999999999999996421 00000
Q ss_pred CceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhccccee
Q 001087 726 EKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVG 805 (1159)
Q Consensus 726 ~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIg 805 (1159)
+.+|.+++.+.++++.+...+ ..+|||++|+||.++|+.+ |+.|++|+|+|||+||+|||++|||||+
T Consensus 491 -----l~~~~~~~~~~~~~~~~~~~~------~~vfAr~~Pe~K~~iV~~l-q~~G~~VamvGDGvNDapAL~~AdVGIA 558 (755)
T TIGR01647 491 -----LLKGDNRDDLPSGELGEMVED------ADGFAEVFPEHKYEIVEIL-QKRGHLVGMTGDGVNDAPALKKADVGIA 558 (755)
T ss_pred -----hcCCcchhhCCHHHHHHHHHh------CCEEEecCHHHHHHHHHHH-HhcCCEEEEEcCCcccHHHHHhCCeeEE
Confidence 122333333333343333332 2499999999999999999 6789999999999999999999999999
Q ss_pred e-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHH
Q 001087 806 I-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSL 883 (1159)
Q Consensus 806 i-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~~~l~~ 883 (1159)
+ +|+|. |+++||+++.++++.... ++.+||..|+|+++++.|.+..|+...++.+...++.+| + +++++++|
T Consensus 559 m~~gtdv--AkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~---~-l~~~~il~ 632 (755)
T TIGR01647 559 VAGATDA--ARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF---Y-FPPIMVVI 632 (755)
T ss_pred ecCCcHH--HHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc---c-hhHHHHHH
Confidence 9 67787 999999999999998877 899999999999999999999999988777766655443 3 88999999
Q ss_pred HHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hccCCcc-CCCCcc
Q 001087 884 YNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSATGQ-NSSGKI 961 (1159)
Q Consensus 884 ~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~~~~~-~~~g~~ 961 (1159)
.|++.+. |.++++....+.+ +.|+ ...++ +.+...++.|++.++..|.+.+ .+....+ ...+..
T Consensus 633 ~~l~~d~-~~~~l~~~~~~~~-----~~p~-------~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (755)
T TIGR01647 633 IAILNDG-TIMTIAYDNVKPS-----KLPQ-------RWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQ 698 (755)
T ss_pred HHHHHhH-hHhhccCCCCCCC-----CCCC-------ccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccccc
Confidence 9999995 7999986554321 2332 22222 3344456678877776665554 2211000 001111
Q ss_pred cccccchhHHHHHHHHHHHHHHH
Q 001087 962 FGIWDVSTMAFTCVVVTVNLRLL 984 (1159)
Q Consensus 962 ~~~~~~~~~~~~~~v~~~~~~~~ 984 (1159)
.....+.|++|+.+++...+.+.
T Consensus 699 ~~~~~~~t~~f~~~~~~~~~~~~ 721 (755)
T TIGR01647 699 LLHGNLQSLIYLQVSISGQATIF 721 (755)
T ss_pred ccHhhhHHHHHHHHHHHHHHHHh
Confidence 12235779999999998888854
No 18
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-89 Score=788.45 Aligned_cols=852 Identities=19% Similarity=0.223 Sum_probs=637.8
Q ss_pred cHHH-hhhhhhHH---HHHHHHHHhhcc--c--------ccccccchhhhHHHHHHHHHHHHHHHHHHHh---hhhHhhc
Q 001087 7 QKGC-LNRRVANC---YFLMISILSTTP--M--------SPVNPVTNVVPLSLVLLVSLIKEAWEDWKRF---QNDMTIN 69 (1159)
Q Consensus 7 pk~L-~~~~~~n~---yfl~i~il~~i~--~--------s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~---~~d~~~n 69 (1159)
|+.. |.++..|. ..++.++++++. + ++.+.|..++ |..++.++.+-..+++.+.. .+-+.+-
T Consensus 83 ~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~gii-L~~vv~vtg~~~~~qe~ks~~im~sF~~l~ 161 (1019)
T KOG0203|consen 83 PEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIV-LAAVVIVTGLFSYYQEAKSSKIMDSFKNLV 161 (1019)
T ss_pred hHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEE-EEEEEEEEecCCCccchhhHHHHHHHhccc
Confidence 4444 44455444 444456666653 1 1234444444 44444555554555554443 3456677
Q ss_pred cceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhh
Q 001087 70 STPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEK 149 (1159)
Q Consensus 70 ~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~ 149 (1159)
+..++|+|+|+...+..++|+|||+|.++-|+++|||++++++.+ |+||+|+|||||.|..+.+.-...+-.
T Consensus 162 P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTGesEP~~~~~~~t~~~~~---- 233 (1019)
T KOG0203|consen 162 PQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTGESEPQTRSPEFTHENPL---- 233 (1019)
T ss_pred hhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEeccccccccCCccCCccccccCch----
Confidence 899999999999999999999999999999999999999999887 579999999999999987754221110
Q ss_pred hcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccC---CCCCCcCH
Q 001087 150 ASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSM---NIPSKRST 226 (1159)
Q Consensus 150 ~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~---~~~~k~s~ 226 (1159)
......|.+|..++|. ++|+|++||.+|.+++.+. .....++|
T Consensus 234 -------------Et~Ni~f~st~~veG~---------------------~~givi~tGd~Tv~G~ia~l~~~~~~~~t~ 279 (1019)
T KOG0203|consen 234 -------------ETRNIAFFSTNCVEGT---------------------GRGIVIATGDRTVMGRIASLASGLEDGKTP 279 (1019)
T ss_pred -------------hheeeeeeeeEEecce---------------------EEEEEEecCCceEEeehhhhhccCCCCCCc
Confidence 1222568888888887 9999999999998866553 45677999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchh
Q 001087 227 LERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISL 306 (1159)
Q Consensus 227 l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL 306 (1159)
+++.+++++.++....+++.+..++....... ..+..+...+.+.++.+|.+|
T Consensus 280 ~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy---------------------------~~l~avv~~i~iivAnvPeGL 332 (1019)
T KOG0203|consen 280 IAKEIEHFIHIITGVAIFLGISFFILALILGY---------------------------EWLRAVVFLIGIIVANVPEGL 332 (1019)
T ss_pred chhhhhchHHHHHHHHHHHHHHHHHHHHhhcc---------------------------hhHHHhhhhheeEEecCcCCc
Confidence 99999999999988888777666544443311 122355557888899999999
Q ss_pred HHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhh
Q 001087 307 YVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEI 386 (1159)
Q Consensus 307 ~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~ 386 (1159)
+++++.....- +++| +++++++|++.++|.||...+||||||||||+|.|+|..+|.++........+.
T Consensus 333 ~~tvTv~Ltlt-akrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~ 401 (1019)
T KOG0203|consen 333 LATVTVCLTLT-AKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTED 401 (1019)
T ss_pred cceehhhHHHH-HHHH----------hhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhh
Confidence 99999999999 9999 899999999999999999999999999999999999999999887654332221
Q ss_pred hhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCce--EEecCC
Q 001087 387 ERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERI--TYQAAS 464 (1159)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~--~y~~~s 464 (1159)
.... . ....+.....+.++..+||.+.....+.+-.+ .-..++
T Consensus 402 ~~~~-----------------------~------------~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~ 446 (1019)
T KOG0203|consen 402 QSGQ-----------------------S------------FDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGD 446 (1019)
T ss_pred hhcc-----------------------c------------ccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCC
Confidence 1110 0 01113456688999999999988754432111 123589
Q ss_pred hhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCC---CcEEEEEecch
Q 001087 465 PDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD---GRLVLYCKGAD 541 (1159)
Q Consensus 465 pdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~---g~~~l~~KGA~ 541 (1159)
+.|.||++++.-.-... ...+..++.+...||||++|..-.+.+.+| .+..+.+||||
T Consensus 447 ~se~ALlk~~e~~~~~~-------------------~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGap 507 (1019)
T KOG0203|consen 447 ASEVALLKFIELILGSV-------------------MELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAP 507 (1019)
T ss_pred HHHHHHHHHHHHhcchH-------------------HHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCCh
Confidence 99999999987532110 002456677888999999999999998765 57899999999
Q ss_pred hHHHHHhhc---------CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 001087 542 SVIYERLAN---------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAE 612 (1159)
Q Consensus 542 ~~i~~~~~~---------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~ 612 (1159)
|.++++|+. .+++..+.+.+...++...|-||+.||++.++++++.+...-.-+ . -+
T Consensus 508 e~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d---~-----------~n 573 (1019)
T KOG0203|consen 508 ERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTD---D-----------VN 573 (1019)
T ss_pred HHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecC---C-----------CC
Confidence 999999986 234566778888899999999999999999998876542111000 0 01
Q ss_pred hhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccC
Q 001087 613 LIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERG 692 (1159)
Q Consensus 613 ~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~ 692 (1159)
.--.+|.|+|++++-||+|..+|+++..|+.||||+.|+|||++.||.+||++.||+.+.....
T Consensus 574 ~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~---------------- 637 (1019)
T KOG0203|consen 574 FPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETV---------------- 637 (1019)
T ss_pred CcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhh----------------
Confidence 1236899999999999999999999999999999999999999999999999999987653211
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHH
Q 001087 693 DPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQV 772 (1159)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~i 772 (1159)
+. ...+.....+ ...+....+.||.|.+|..+.++++.+.+. .-.-.||||.||+||..|
T Consensus 638 ------e~----~a~r~~~~v~------~vn~~~a~a~VihG~eL~~~~~~qld~il~----nh~eIVFARTSPqQKLiI 697 (1019)
T KOG0203|consen 638 ------ED----IAKRLNIPVE------QVNSRDAKAAVIHGSELPDMSSEQLDELLQ----NHQEIVFARTSPQQKLII 697 (1019)
T ss_pred ------hh----hHHhcCCccc------ccCccccceEEEecccccccCHHHHHHHHH----hCCceEEEecCccceEEe
Confidence 00 1111111111 122334679999999999888776665554 445689999999999999
Q ss_pred HHHHHhccCcEEEEecCCccCHHHHHhcccce--eecCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHH
Q 001087 773 TSLVKKGARKITLSIGDGANDVSMIQAAHIGV--GISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLY 849 (1159)
Q Consensus 773 V~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI--gisg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~ 849 (1159)
|+.. |+.|.+|+.+|||+||+||||.||||| ||+|++. ++.|||++|.|++|.++. -+.+||.+|.|++|.|.|
T Consensus 698 Ve~c-Qr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAY 774 (1019)
T KOG0203|consen 698 VEGC-QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAY 774 (1019)
T ss_pred Ehhh-hhcCcEEEEeCCCcCCChhhcccccceeeccccchH--HHhhcceEEecCcchhheeecccceehhhhHHHHHHH
Confidence 9999 899999999999999999999999999 6699999 999999999999999988 589999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccc-hhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHH
Q 001087 850 FFYKNLTFTLTQFWFTFQTGFSGQRF-YDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRV 928 (1159)
Q Consensus 850 ~~~kni~~~~~~~~~~~~~~fsg~~~-~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~ 928 (1159)
.+..|+..+.+.++|.++ |.|+ +...+++.+.+..+..|++.|+.+.+ ++++|+|.|+ .+...++.|.+.
T Consensus 775 TLTsNipEI~PfL~fi~~----giPLplgtitIL~IDLgTDmvPAiSLAYE~a--EsDIM~r~PR---~p~~D~LVN~rL 845 (1019)
T KOG0203|consen 775 TLTSNIPEITPFLLFILF----GIPLPLGTVTILCIDLGTDIVPAISLAYEKA--ESDIMLRPPR---NPKDDKLVNKRL 845 (1019)
T ss_pred HHHhcchhHhHHHHHHHh----CCCcccchhhhhhhHhhcccchhhhHhccCc--hhhHHhcCCC---CCcccccccchh
Confidence 999999999999888888 7887 78899999999999999999998665 8899999998 235677888887
Q ss_pred H-HHHHHHHHHHHHHHHHHHH-hccCCccC---------------------CCCccccc-------ccchhHHHHHHHHH
Q 001087 929 V-AIWAFFSVYQSLVLYNCVT-TSSATGQN---------------------SSGKIFGI-------WDVSTMAFTCVVVT 978 (1159)
Q Consensus 929 f-~~~~~~~~~~s~vif~~~~-~~~~~~~~---------------------~~g~~~~~-------~~~~~~~~~~~v~~ 978 (1159)
+ ..++..|.+|++..|+.++ .+...++. +-|+.-.+ +...+..|.+++.+
T Consensus 846 i~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~ 925 (1019)
T KOG0203|consen 846 ISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVV 925 (1019)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHH
Confidence 4 5688889999999998877 44433332 11222111 12234455555555
Q ss_pred HHHHHHHh-hccchh----hHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHH
Q 001087 979 VNLRLLMM-CNTITR----FHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLG 1052 (1159)
Q Consensus 979 ~~~~~~l~-~~~~~~----~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~ 1052 (1159)
+...+.+. ++.-+. +.++.++.++++-.++..+..+.|. ....+++. +-+.+|+..+...++.++.
T Consensus 926 Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg--------~~~~l~~~pl~~~~wl~a~P~~ilIfvy 997 (1019)
T KOG0203|consen 926 QWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPG--------VLYALGMYPLKFQWWLVAFPFGILIFVY 997 (1019)
T ss_pred hHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCcc--------HHHHhccCCCCcEEEEecccceeeeeeH
Confidence 55554332 222222 2345555555555555455555432 33445555 6678899999999999999
Q ss_pred HHHHHHHHHhh
Q 001087 1053 DFIFQGVQRWF 1063 (1159)
Q Consensus 1053 ~~~~k~~~~~~ 1063 (1159)
|.+.|++-|.|
T Consensus 998 dE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 998 DEVRKLFIRRY 1008 (1019)
T ss_pred HHHHhHhhhhC
Confidence 99999888865
No 19
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-84 Score=758.55 Aligned_cols=785 Identities=19% Similarity=0.257 Sum_probs=545.2
Q ss_pred hhhhHHHHHHHHHHhhcc-cccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhcc--ceEEEeeCCeEEEeeccCc
Q 001087 13 RRVANCYFLMISILSTTP-MSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINS--TPVEVLQGQRWVSIPWRKL 89 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~-~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~--~~~~V~r~g~~~~i~~~~l 89 (1159)
..+-|.||++-++--.+. ...+.+|. ..++++...|.+-..+|..+..+..+++-. ..|+|+|+|.|++|.++||
T Consensus 191 ~EvL~PfYlFQ~fSv~lW~~d~Y~~YA--~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eL 268 (1140)
T KOG0208|consen 191 KEVLNPFYLFQAFSVALWLADSYYYYA--FCIVIISVYSIVLSVYETRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSEL 268 (1140)
T ss_pred HhccchHHHHHhHHhhhhhcccchhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCEEEEEecccc
Confidence 667778888764433333 33344443 334445555666666777666666666654 4789999999999999999
Q ss_pred ccceEEEEcc-CCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcce
Q 001087 90 QVGDIVMVKQ-DGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYT 168 (1159)
Q Consensus 90 ~vGDIV~v~~-ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~ 168 (1159)
+||||+.+.+ +-..|||++|++ |.|.||||+|||||.|+.|.+++.-.+ ...-.+.+..-+.+...
T Consensus 269 VPGDil~i~~~~~~~PcDa~Li~-----g~civNEsmLTGESVPv~K~~l~~~~~--------~~~~~~~~~~~~~rh~l 335 (1140)
T KOG0208|consen 269 VPGDILYIPPPGKIMPCDALLIS-----GDCIVNESMLTGESVPVTKTPLPMGTD--------SLDSITISMSTNSRHTL 335 (1140)
T ss_pred ccccEEEECCCCeEeecceEEEe-----CcEEeecccccCCcccccccCCccccc--------cCcCeeechhhcCccee
Confidence 9999999998 999999999997 779999999999999999999872111 01112334444666788
Q ss_pred eEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccch---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH
Q 001087 169 FTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVM 245 (1159)
Q Consensus 169 f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~T---k~~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l 245 (1159)
|.||..++-+... .+-+.++|++||..| ++.++...++.-...+.+..-+++..+.++
T Consensus 336 fcGT~vlq~r~~~---------------g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~i---- 396 (1140)
T KOG0208|consen 336 FCGTKVLQARAYL---------------GGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVII---- 396 (1140)
T ss_pred eccceEEEeecCC---------------CCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHH----
Confidence 9999988755221 233899999999999 566676666655566666665555444433
Q ss_pred HHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccc
Q 001087 246 CLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKD 325 (1159)
Q Consensus 246 ~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d 325 (1159)
+++++++..+..... + ...-..+++++.++...+|.+||.++++..... ..++
T Consensus 397 a~~gfiy~~i~l~~~----g-------------------~~~~~iiirsLDliTi~VPPALPAaltvG~~~a-~~RL--- 449 (1140)
T KOG0208|consen 397 ALIGFIYTAIVLNLL----G-------------------VPLKTIIIRSLDLITIVVPPALPAALTVGIIYA-QSRL--- 449 (1140)
T ss_pred HHHHHHHHhHhHHHc----C-------------------CCHHHHhhhhhcEEEEecCCCchhhhhHHHHHH-HHHH---
Confidence 333333322221100 0 001127888999999999999999999998888 7777
Q ss_pred cccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccch
Q 001087 326 LHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSV 405 (1159)
Q Consensus 326 ~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1159)
.++++.|-+++.+..-|+++.+|||||||||++.+++-.+..-...-..+ ++.......
T Consensus 450 -------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~-~~~~~~~~~------------- 508 (1140)
T KOG0208|consen 450 -------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDG-PELKVVTED------------- 508 (1140)
T ss_pred -------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccccccc-chhhhhhhh-------------
Confidence 78999999999999999999999999999999999998876532211000 000000000
Q ss_pred hhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeec
Q 001087 406 KAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRT 485 (1159)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~ 485 (1159)
....+ .... -+........|..++|.||+....... ..++|.|.-+.+. .|+.+.+.+
T Consensus 509 -----~~~~~------~~l~-~~~~~~~~~~~~~a~atCHSL~~v~g~-------l~GDPLdlkmfe~---t~w~~ee~~ 566 (1140)
T KOG0208|consen 509 -----SLQLF------YKLS-LRSSSLPMGNLVAAMATCHSLTLVDGT-------LVGDPLDLKMFES---TGWVYEEAD 566 (1140)
T ss_pred -----hccce------eecc-ccccCCchHHHHHHHhhhceeEEeCCe-------eccCceeeeeeec---cceEEEecc
Confidence 00000 0000 001111235788999999988664322 2367777666554 667764421
Q ss_pred -----------CceEEEEecc---ccccCccceEEEEEeEeecCCCCCceEEEEEEcC-CCcEEEEEecchhHHHHHhhc
Q 001087 486 -----------PTMIYVRESH---VEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYA-DGRLVLYCKGADSVIYERLAN 550 (1159)
Q Consensus 486 -----------~~~i~i~~~~---~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~g~~~l~~KGA~~~i~~~~~~ 550 (1159)
.....++-+. ...... ....+.+++.+||+|..+||||||+++ +.+..+|+|||||.|.+.|++
T Consensus 567 ~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~-~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p 645 (1140)
T KOG0208|consen 567 IEDEATREFNTLIPTVVRPPENAFNQSTEC-GEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP 645 (1140)
T ss_pred ccchhhhhhCCccCCEeCCCcccccCCCcC-CCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc
Confidence 0111121111 000000 123799999999999999999999987 357899999999999999998
Q ss_pred CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccc
Q 001087 551 GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKL 630 (1159)
Q Consensus 551 ~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~l 630 (1159)
+. +++++++.+++|+.+|+|++++|+|.|+.. .|.+. ....++.+|.||+|+|++.+|++|
T Consensus 646 ~t--vP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~--------------~~~~Rd~vEs~l~FlGLiVmeNkL 706 (1140)
T KOG0208|consen 646 ET--VPADYQEVLKEYTHQGFRVIALASKELETS---TLQKA--------------QKLSRDTVESNLEFLGLIVMENKL 706 (1140)
T ss_pred cc--CCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHH--------------hhccHhhhhccceeeEEEEeeccc
Confidence 64 678899999999999999999999999876 33221 112347889999999999999999
Q ss_pred cCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccch---h--cccCChHHHHHHHHHHH
Q 001087 631 QEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRD---V--EERGDPVEIARFMREEV 705 (1159)
Q Consensus 631 q~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~---~--~~~~~~~~~~~~~~~~~ 705 (1159)
|+..+.+|++|++|+|+++|+||||..||+.+|++||++.+..+++....+..+..+ . ...++.... ...++..
T Consensus 707 K~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~-~~~~~~~ 785 (1140)
T KOG0208|consen 707 KEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQF-LDPKEPD 785 (1140)
T ss_pred ccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCcccc-CCCCccC
Confidence 999999999999999999999999999999999999999998887776654221100 0 000000000 0000000
Q ss_pred HHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEE
Q 001087 706 KRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITL 785 (1159)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl 785 (1159)
. + ....+...+......+.+.++|+++..++ .+..+.+.++..+| .|||||+|.||+++|+.+ |+.|++|+
T Consensus 786 ~-~----~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il~~~--~VfARMsP~qK~~Lie~l-Qkl~y~Vg 856 (1140)
T KOG0208|consen 786 P-D----LASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKILLKG--TVFARMSPDQKAELIEAL-QKLGYKVG 856 (1140)
T ss_pred c-c----ccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHHhcC--eEEeecCchhHHHHHHHH-HhcCcEEE
Confidence 0 0 00000000112346789999999999999 44455555555554 599999999999999999 78999999
Q ss_pred EecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 786 SIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWF 864 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~ 864 (1159)
|||||||||+|||+|||||++|.+| |.-||.|.-.-++.-..+ ++.+||.++..-.....|.-.+. +++|..
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs----~iqFis 929 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYS----AIQFIS 929 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHH----HHHHHh
Confidence 9999999999999999999999998 888999998877777666 79999999887777777764333 344444
Q ss_pred HHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHH
Q 001087 865 TFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLY 944 (1159)
Q Consensus 865 ~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif 944 (1159)
.++. ++-...+.+.|.++.+++....-+++++.+|+ ..++-...| ...+++.+.+...+++.++..++-+
T Consensus 930 v~~L-Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a--~~~L~~~rP-------~~~L~s~~~~~~l~~q~vli~l~q~ 999 (1140)
T KOG0208|consen 930 VVFL-YLINSNLGDLQFLFIDLLIITPIAVMMSRFDA--SDKLFPKRP-------PTNLLSKKILVPLLLQIVLICLVQW 999 (1140)
T ss_pred hhee-eeecccccchhhhhhHHHHHHHHHHHHccCcH--HHHhcCCCC-------CccccccchhhhhHHHHHHHHHHHH
Confidence 4332 22345578899999999887776777776664 444444333 4568888887777766666666655
Q ss_pred HHHH
Q 001087 945 NCVT 948 (1159)
Q Consensus 945 ~~~~ 948 (1159)
..++
T Consensus 1000 i~~l 1003 (1140)
T KOG0208|consen 1000 ILTL 1003 (1140)
T ss_pred hhhe
Confidence 5554
No 20
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.6e-75 Score=707.53 Aligned_cols=548 Identities=16% Similarity=0.173 Sum_probs=415.3
Q ss_pred cHHHhhhhhhHHHHHHHHHHhhcc-ccc-----ccc--cchhhhHHHHHHHHHHHHHHH---HHHHhhhhHhhc---cc-
Q 001087 7 QKGCLNRRVANCYFLMISILSTTP-MSP-----VNP--VTNVVPLSLVLLVSLIKEAWE---DWKRFQNDMTIN---ST- 71 (1159)
Q Consensus 7 pk~L~~~~~~n~yfl~i~il~~i~-~s~-----~~~--~~~~~pl~~vl~vs~ik~~~e---d~~r~~~d~~~n---~~- 71 (1159)
|+.+| +.+..+..++.++++++. .-+ .+| +..+..++++++...+..+.| ++|..++.+.+. +.
T Consensus 26 ~~~~~-~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~ 104 (673)
T PRK14010 26 PVYMI-KNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEM 104 (673)
T ss_pred HHHHH-HChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 44444 445555555666666643 111 111 223333333333333333444 555544433333 33
Q ss_pred eEE-EeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhh
Q 001087 72 PVE-VLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKA 150 (1159)
Q Consensus 72 ~~~-V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~ 150 (1159)
+++ |.|||++++++.++|+|||+|.|++||.||||+++++++ +.||||+|||||.|+.|.++.+.
T Consensus 105 ~a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~-----~~VDESaLTGES~PV~K~~g~d~--------- 170 (673)
T PRK14010 105 KARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL-----ATVDESAITGESAPVIKESGGDF--------- 170 (673)
T ss_pred eEEEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcc-----eEEecchhcCCCCceeccCCCcc---------
Confidence 565 679999999999999999999999999999999999864 45999999999999999986211
Q ss_pred cccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhh---hhccCCCCCCcCHH
Q 001087 151 SEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKV---MMNSMNIPSKRSTL 227 (1159)
Q Consensus 151 ~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l 227 (1159)
+ .+|+||.+.+|. +.++|+.||.+|.+ ....+.++.++||+
T Consensus 171 --------------~-~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~ 214 (673)
T PRK14010 171 --------------D-NVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPN 214 (673)
T ss_pred --------------C-eeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHH
Confidence 0 269999998887 99999999999955 44456677788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhH
Q 001087 228 ERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLY 307 (1159)
Q Consensus 228 ~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~ 307 (1159)
|..++.+...+.++.++++ .++. .+.. |. .....+...+.+.+.+||++|+
T Consensus 215 e~~l~~l~~~l~ii~l~~~--~~~~-~~~~-----~~---------------------~~~~~~~~~val~V~~IP~aL~ 265 (673)
T PRK14010 215 EIALFTLLMTLTIIFLVVI--LTMY-PLAK-----FL---------------------NFNLSIAMLIALAVCLIPTTIG 265 (673)
T ss_pred HHHHHHHHHHHhHHHHHHH--HHHH-HHHh-----hc---------------------cHHHHHHHHHHHHHHhhhhhHH
Confidence 9887766544433222111 1111 0000 00 0011445566777788999999
Q ss_pred HHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhh
Q 001087 308 VSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIE 387 (1159)
Q Consensus 308 v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~ 387 (1159)
..++++...+ +.++ +++++++|+.+.+|.||++|+||||||||||+|++.+.++...+.
T Consensus 266 ~~~~~~~~~g-~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~---------- 324 (673)
T PRK14010 266 GLLSAIGIAG-MDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS---------- 324 (673)
T ss_pred HHHHHHHHHH-HHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC----------
Confidence 9999988888 8887 899999999999999999999999999999997776655421000
Q ss_pred hhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhH
Q 001087 388 RGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDE 467 (1159)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE 467 (1159)
...++++...++|+.. +.||.+
T Consensus 325 --------------------------------------------~~~~~ll~~a~~~~~~--------------s~~P~~ 346 (673)
T PRK14010 325 --------------------------------------------SSFERLVKAAYESSIA--------------DDTPEG 346 (673)
T ss_pred --------------------------------------------ccHHHHHHHHHHhcCC--------------CCChHH
Confidence 0123455666677532 258999
Q ss_pred HHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHH
Q 001087 468 AALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYER 547 (1159)
Q Consensus 468 ~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~ 547 (1159)
.|++++|++.|+... .......||++++|+|++.++ |+ .+.|||++.+.++
T Consensus 347 ~AIv~~a~~~~~~~~------------------------~~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~ 397 (673)
T PRK14010 347 RSIVKLAYKQHIDLP------------------------QEVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKR 397 (673)
T ss_pred HHHHHHHHHcCCCch------------------------hhhcceeccccccceeEEEEC---CE--EEEECCHHHHHHH
Confidence 999999998775321 001123799999999999753 33 4569999999999
Q ss_pred hhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeec
Q 001087 548 LANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIE 627 (1159)
Q Consensus 548 ~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ie 627 (1159)
|...+........+..++++++|+|+++++ .|++++|+++++
T Consensus 398 ~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~--------------------------------------~~~~~lG~i~l~ 439 (673)
T PRK14010 398 VKEAGGHIPVDLDALVKGVSKKGGTPLVVL--------------------------------------EDNEILGVIYLK 439 (673)
T ss_pred hhhcCCCCchHHHHHHHHHHhCCCeEEEEE--------------------------------------ECCEEEEEEEee
Confidence 986443334456677788999999999876 267899999999
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
|++|+|++++|++||++||+++|+|||++.||.+||+++|+.+
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~------------------------------------- 482 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR------------------------------------- 482 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-------------------------------------
Confidence 9999999999999999999999999999999999999999931
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEe
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 787 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~i 787 (1159)
+++|++|+||.++|+.+ |+.|++|+|+
T Consensus 483 ----------------------------------------------------v~A~~~PedK~~iV~~l-Q~~G~~VaMt 509 (673)
T PRK14010 483 ----------------------------------------------------FVAECKPEDKINVIREE-QAKGHIVAMT 509 (673)
T ss_pred ----------------------------------------------------EEcCCCHHHHHHHHHHH-HhCCCEEEEE
Confidence 89999999999999999 6789999999
Q ss_pred cCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 788 GDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFT 865 (1159)
Q Consensus 788 GDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~ 865 (1159)
|||+||+|||++|||||++ +|++. |+++||+++.++++.+.. ++..||..|.++++++.|++..|+..++..+...
T Consensus 510 GDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~ 587 (673)
T PRK14010 510 GDGTNDAPALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAM 587 (673)
T ss_pred CCChhhHHHHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHH
Confidence 9999999999999999998 88888 999999999999999887 8999999999999999999999999888777655
Q ss_pred Hhccccc
Q 001087 866 FQTGFSG 872 (1159)
Q Consensus 866 ~~~~fsg 872 (1159)
|...|.+
T Consensus 588 ~~~~~~~ 594 (673)
T PRK14010 588 FMAAMPA 594 (673)
T ss_pred HHHhccc
Confidence 5544433
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=5.6e-74 Score=694.64 Aligned_cols=505 Identities=18% Similarity=0.213 Sum_probs=405.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHhhc---cc-eEEEeeCCe-EEEeeccCcccceEEEEccCCccCceEEEEeecCCCC
Q 001087 43 LSLVLLVSLIKEAWEDWKRFQNDMTIN---ST-PVEVLQGQR-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADG 117 (1159)
Q Consensus 43 l~~vl~vs~ik~~~ed~~r~~~d~~~n---~~-~~~V~r~g~-~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g 117 (1159)
+++.++++..-|.+.++|..++.+.+. +. +++|+|+|+ +++++.++|++||+|.|++||.||||+++++++
T Consensus 72 l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~---- 147 (679)
T PRK01122 72 LWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV---- 147 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc----
Confidence 333444444556677776666544443 33 699999987 899999999999999999999999999999864
Q ss_pred eEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecC
Q 001087 118 VCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNT 197 (1159)
Q Consensus 118 ~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt 197 (1159)
+.||||.|||||.|+.|.++++. ..+|+||.+.+|.
T Consensus 148 -a~VDESaLTGES~PV~K~~G~~~------------------------~~V~aGT~v~~G~------------------- 183 (679)
T PRK01122 148 -ASVDESAITGESAPVIRESGGDF------------------------SSVTGGTRVLSDW------------------- 183 (679)
T ss_pred -EEEEcccccCCCCceEeCCCCcc------------------------CeEEeceEEEeee-------------------
Confidence 46999999999999999986531 1269999999887
Q ss_pred CcEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCcc
Q 001087 198 EYIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVE 274 (1159)
Q Consensus 198 ~~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~ 274 (1159)
+.++|+.+|.+|.+ ......++.++||+|+.++.+...++.+.++++++...+ . ||...
T Consensus 184 --~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~-~-------~~~g~-------- 245 (679)
T PRK01122 184 --IVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPF-A-------AYSGG-------- 245 (679)
T ss_pred --EEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHH-H-------HHhCc--------
Confidence 99999999999955 444556667789999998887766655444333222111 1 11100
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEE
Q 001087 275 DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYI 354 (1159)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I 354 (1159)
-..+...+++++.+||++|+..++++...+ +.++ .++++++|+.+.+|.||++|+|
T Consensus 246 -------------~~~l~~~iallV~aiP~alg~l~~~i~i~g-~~r~----------ak~gvLvk~~~avE~lg~v~~I 301 (679)
T PRK01122 246 -------------ALSITVLVALLVCLIPTTIGGLLSAIGIAG-MDRV----------LQANVIATSGRAVEAAGDVDTL 301 (679)
T ss_pred -------------hHHHHHHHHHHHHcccchhhhHHHHHHHHH-HHHH----------hcCCeeecCchHHHHhcCCCEE
Confidence 015667788999999999998888887777 7777 7899999999999999999999
Q ss_pred EecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhH
Q 001087 355 FSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDAC 434 (1159)
Q Consensus 355 ~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (1159)
|+|||||||+|+|++.+++..+. ...
T Consensus 302 ~~DKTGTLT~g~~~v~~~~~~~~------------------------------------------------------~~~ 327 (679)
T PRK01122 302 LLDKTGTITLGNRQASEFLPVPG------------------------------------------------------VTE 327 (679)
T ss_pred EEeCCCCCcCCcEEEEEEEeCCC------------------------------------------------------CCH
Confidence 99999999999999988743110 001
Q ss_pred HHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHH-cCcEEEeecCceEEEEeccccccCccceEEEEEeEee
Q 001087 435 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKN-FGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVL 513 (1159)
Q Consensus 435 ~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~-~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~ 513 (1159)
++++.+.++|+.. ..||...|++++|++ .|+.. .+..++..+..
T Consensus 328 ~~ll~~a~~~s~~--------------s~hP~~~AIv~~a~~~~~~~~---------------------~~~~~~~~~~~ 372 (679)
T PRK01122 328 EELADAAQLSSLA--------------DETPEGRSIVVLAKQRFNLRE---------------------RDLQSLHATFV 372 (679)
T ss_pred HHHHHHHHHhcCC--------------CCCchHHHHHHHHHhhcCCCc---------------------hhhccccceeE
Confidence 2455666666432 247999999999986 34321 01124556778
Q ss_pred cCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHH
Q 001087 514 EFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKF 593 (1159)
Q Consensus 514 ~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~ 593 (1159)
||++.+|+|++.+. | ..|+|||++.+++.|...+.+.+++..+.+++++++|+|++++|+
T Consensus 373 pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~--------------- 432 (679)
T PRK01122 373 PFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAE--------------- 432 (679)
T ss_pred eecCcCceEEEEEC---C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEE---------------
Confidence 99999998887652 4 578999999999999765545566778888999999999999994
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCc
Q 001087 594 IQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEM 673 (1159)
Q Consensus 594 ~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~ 673 (1159)
|++++|+++++|++|+|++++|++|+++||+++|+|||++.||.+||++||+.+
T Consensus 433 -----------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~--- 486 (679)
T PRK01122 433 -----------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD--- 486 (679)
T ss_pred -----------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE---
Confidence 678999999999999999999999999999999999999999999999999931
Q ss_pred eEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHh
Q 001087 674 KQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLS 753 (1159)
Q Consensus 674 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~ 753 (1159)
T Consensus 487 -------------------------------------------------------------------------------- 486 (679)
T PRK01122 487 -------------------------------------------------------------------------------- 486 (679)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-
Q 001087 754 LNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL- 831 (1159)
Q Consensus 754 ~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l- 831 (1159)
+++|++|+||.++|+.+ |+.|++|+|+|||+||+|||++|||||++ +|++. |+++||+++.++++.+..
T Consensus 487 ------v~A~~~PedK~~iV~~l-Q~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~ 557 (679)
T PRK01122 487 ------FLAEATPEDKLALIRQE-QAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIE 557 (679)
T ss_pred ------EEccCCHHHHHHHHHHH-HHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHH
Confidence 89999999999999999 68899999999999999999999999999 88888 999999999999998877
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 832 LLVHGRWSYLRICKVVLYFFYKNLTFTLTQ 861 (1159)
Q Consensus 832 ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~ 861 (1159)
++..||...-.-..+..|++...++-++..
T Consensus 558 av~~GR~~~~tr~~~~~f~~~n~~~~~~~i 587 (679)
T PRK01122 558 VVEIGKQLLMTRGALTTFSIANDVAKYFAI 587 (679)
T ss_pred HHHHHHHHHhhhHhhhhhhHHHHHHHHHHH
Confidence 799999999777778888887666544433
No 22
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.9e-70 Score=662.17 Aligned_cols=510 Identities=18% Similarity=0.218 Sum_probs=405.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhHhhcc---c-eEEEee-CCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEE
Q 001087 46 VLLVSLIKEAWEDWKRFQNDMTINS---T-PVEVLQ-GQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCY 120 (1159)
Q Consensus 46 vl~vs~ik~~~ed~~r~~~d~~~n~---~-~~~V~r-~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~ 120 (1159)
.+++...-|.+.++|..++.+.+++ . .++|+| +|++++|+.++|+|||+|.|++||.||||++++++ .+.
T Consensus 76 ~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-----~~~ 150 (675)
T TIGR01497 76 TVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-----VAS 150 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-----cEE
Confidence 3445555577777777776555543 3 478885 89999999999999999999999999999999985 356
Q ss_pred EeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcE
Q 001087 121 IETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYI 200 (1159)
Q Consensus 121 Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i 200 (1159)
||||.|||||.|+.|.+++.. ..+|+||.+.+|. +
T Consensus 151 VDESaLTGES~PV~K~~g~~~------------------------~~V~aGT~v~~G~---------------------~ 185 (675)
T TIGR01497 151 VDESAITGESAPVIKESGGDF------------------------ASVTGGTRILSDW---------------------L 185 (675)
T ss_pred EEcccccCCCCceeecCCCCc------------------------ceeecCcEEEeeE---------------------E
Confidence 999999999999999986531 0258899888887 9
Q ss_pred EEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCC
Q 001087 201 IGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQ 277 (1159)
Q Consensus 201 ~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~ 277 (1159)
.++|+.+|.+|.+ ....+.++.++||+|..++.+..++.++.++++++.. .+..+..
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~-~~~~~~~------------------- 245 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLW-PFAAYGG------------------- 245 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcC-------------------
Confidence 9999999999955 4444566777899999888877665444333322111 1111100
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEec
Q 001087 278 FNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSD 357 (1159)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sD 357 (1159)
. ...+...+.+++.+||++|......+...+ +.++ .++++++|+...+|.||++|+||||
T Consensus 246 ---~------~~~~~~lvallV~aiP~aLg~l~~av~iag-~~r~----------ar~gvLvK~~~avE~lg~v~~I~~D 305 (675)
T TIGR01497 246 ---N------AISVTVLVALLVCLIPTTIGGLLSAIGIAG-MDRV----------LGFNVIATSGRAVEACGDVDTLLLD 305 (675)
T ss_pred ---h------hHHHHHHHHHHHHhCchhhhhHHHHHHHHH-HHHH----------HHCCeEeeCcHHHHHhhCCCEEEEC
Confidence 0 014555688899999997766555555556 6666 7899999999999999999999999
Q ss_pred CCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHH
Q 001087 358 KTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEF 437 (1159)
Q Consensus 358 KTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (1159)
||||||+|+|++.+++..+. ...+++
T Consensus 306 KTGTLT~g~~~v~~~~~~~~------------------------------------------------------~~~~~l 331 (675)
T TIGR01497 306 KTGTITLGNRLASEFIPAQG------------------------------------------------------VDEKTL 331 (675)
T ss_pred CCCcccCCCeEEEEEEecCC------------------------------------------------------CcHHHH
Confidence 99999999999998753110 011245
Q ss_pred HHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCC
Q 001087 438 FRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNS 517 (1159)
Q Consensus 438 ~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s 517 (1159)
+...++|+.. +.||.+.|++++|++.|.... ...++..+..||++
T Consensus 332 l~~aa~~~~~--------------s~hP~a~Aiv~~a~~~~~~~~---------------------~~~~~~~~~~pf~~ 376 (675)
T TIGR01497 332 ADAAQLASLA--------------DDTPEGKSIVILAKQLGIRED---------------------DVQSLHATFVEFTA 376 (675)
T ss_pred HHHHHHhcCC--------------CCCcHHHHHHHHHHHcCCCcc---------------------ccccccceEEEEcC
Confidence 5666666432 258999999999998775321 11234456789999
Q ss_pred CCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHH
Q 001087 518 TRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAK 597 (1159)
Q Consensus 518 ~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~ 597 (1159)
.+|+|++.+. +| ..++|||++.+.+.|...+...++.+.+.+++++++|+|++++|+
T Consensus 377 ~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~------------------- 433 (675)
T TIGR01497 377 QTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE------------------- 433 (675)
T ss_pred CCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEE-------------------
Confidence 9887776553 44 478999999999988765444556678888999999999999995
Q ss_pred hhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEE
Q 001087 598 SSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFI 677 (1159)
Q Consensus 598 ~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~ 677 (1159)
|.+++|+++++|++|+|++++|++|+++||+++|+|||+..||.++|+++|+.+
T Consensus 434 -------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~------- 487 (675)
T TIGR01497 434 -------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD------- 487 (675)
T ss_pred -------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-------
Confidence 458999999999999999999999999999999999999999999999999831
Q ss_pred EecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCC
Q 001087 678 ITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCS 757 (1159)
Q Consensus 678 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~ 757 (1159)
T Consensus 488 -------------------------------------------------------------------------------- 487 (675)
T TIGR01497 488 -------------------------------------------------------------------------------- 487 (675)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhh
Q 001087 758 SVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVH 835 (1159)
Q Consensus 758 ~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~ 835 (1159)
+++|++|+||..+|+.+ |+.|+.|+|+|||.||+|||++|||||++ +|++. |+++||+++.++++.+.. ++.+
T Consensus 488 --v~a~~~PedK~~~v~~l-q~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~--akeaadivLldd~~s~Iv~av~~ 562 (675)
T TIGR01497 488 --FIAEATPEDKIALIRQE-QAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSDPTKLIEVVHI 562 (675)
T ss_pred --EEcCCCHHHHHHHHHHH-HHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEECCCCHHHHHHHHHH
Confidence 78999999999999999 67889999999999999999999999999 66777 899999999999998877 7999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001087 836 GRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQT 868 (1159)
Q Consensus 836 Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~ 868 (1159)
||..+-....+..|++..+++-++..+-..|..
T Consensus 563 GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~~~ 595 (675)
T TIGR01497 563 GKQLLITRGALTTFSIANDVAKYFAIIPAIFAA 595 (675)
T ss_pred HHHHHHHHHHHheeeecccHHHHHHHHHHHHHh
Confidence 999999999999999999988777655444443
No 23
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-70 Score=625.92 Aligned_cols=863 Identities=19% Similarity=0.233 Sum_probs=536.0
Q ss_pred Hhh-hhhhHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhc--cceEEEeeCCeEEEeec
Q 001087 10 CLN-RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTIN--STPVEVLQGQRWVSIPW 86 (1159)
Q Consensus 10 L~~-~~~~n~yfl~i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n--~~~~~V~r~g~~~~i~~ 86 (1159)
||. |-.+.+|.+.+.+..+|-+.. .||.+++.|++++.+-+. -..+..+..+..+.+. +..+.|+|+++|+.+..
T Consensus 191 LFkE~A~aPfFVFQVFcvgLWCLDe-yWYySlFtLfMli~fE~t-lV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~s 268 (1160)
T KOG0209|consen 191 LFKEHAVAPFFVFQVFCVGLWCLDE-YWYYSLFTLFMLIAFEAT-LVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMS 268 (1160)
T ss_pred HHHHhccCceeeHhHHhHHHHHhHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCCceEEEEEecCcceeccc
Confidence 566 888888888888887776544 477787777776665332 1222223333334443 45678999999999999
Q ss_pred cCcccceEEEEcc---CCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCC
Q 001087 87 RKLQVGDIVMVKQ---DGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPN 163 (1159)
Q Consensus 87 ~~l~vGDIV~v~~---ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn 163 (1159)
+||.|||+|.|.. +..+|||++||. |.|.||||+|||||.|..|.+++... .++. +..+...
T Consensus 269 eeLlPgDvVSI~r~~ed~~vPCDllLL~-----GsciVnEaMLtGESvPl~KE~Ie~~~----~d~~------ld~~~d~ 333 (1160)
T KOG0209|consen 269 EELLPGDVVSIGRGAEDSHVPCDLLLLR-----GSCIVNEAMLTGESVPLMKESIELRD----SDDI------LDIDRDD 333 (1160)
T ss_pred cccCCCceEEeccCcccCcCCceEEEEe-----cceeechhhhcCCCccccccccccCC----hhhh------ccccccc
Confidence 9999999999987 778999999997 77889999999999999999987552 2222 2223334
Q ss_pred CCcceeEEEEEEcCccccCCCCceeeccceeec-CCcEEEEEEEeccch---hhhhccCCCCCCcCHHHHHHHHHHHHHH
Q 001087 164 NSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRN-TEYIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALF 239 (1159)
Q Consensus 164 ~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~n-t~~i~gvVv~tG~~T---k~~~n~~~~~~k~s~l~~~~n~~~~~l~ 239 (1159)
+....|.||.+++-..-+ -++++. .+-+.+.|++||.|| |+++.......+-|.-.+ + ..+++
T Consensus 334 k~hVlfGGTkivQht~p~---------~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTaNn~--E--tf~FI 400 (1160)
T KOG0209|consen 334 KLHVLFGGTKIVQHTPPK---------KASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTANNR--E--TFIFI 400 (1160)
T ss_pred ceEEEEcCceEEEecCCc---------cccccCCCCCeEEEEEeccccccCCceeeeEEecceeeeeccH--H--HHHHH
Confidence 556789999888643100 111221 234899999999999 344333222222222111 2 22233
Q ss_pred HHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhh
Q 001087 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQST 319 (1159)
Q Consensus 240 ~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~ 319 (1159)
+++++++++.+ +++|.... -+|... --..|+-...++...||.-||+-++++--.. .
T Consensus 401 LFLlVFAiaAa--~Yvwv~Gs-----------------kd~~Rs---rYKL~LeC~LIlTSVvPpELPmELSmAVNsS-L 457 (1160)
T KOG0209|consen 401 LFLLVFAIAAA--GYVWVEGS-----------------KDPTRS---RYKLFLECTLILTSVVPPELPMELSMAVNSS-L 457 (1160)
T ss_pred HHHHHHHHHhh--heEEEecc-----------------cCcchh---hhheeeeeeEEEeccCCCCCchhhhHHHHHH-H
Confidence 33333333332 33343211 011110 0114555677788899999997766654333 2
Q ss_pred hhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCc
Q 001087 320 QYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIP 399 (1159)
Q Consensus 320 ~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~ 399 (1159)
..+ ++.++.|-.+=.+.-.|+||..|||||||||+..|.|..+- |..-..+ ..
T Consensus 458 ~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gva--g~~~~~~--~~------------- 510 (1160)
T KOG0209|consen 458 IAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVA--GLSADEG--AL------------- 510 (1160)
T ss_pred HHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEEecc--cccCCcc--cc-------------
Confidence 333 56677777777778899999999999999999999998762 2110000 00
Q ss_pred ccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCc
Q 001087 400 EVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGF 479 (1159)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~ 479 (1159)
.+-++.-.+-.+.+|.||+...-.++ --|+|.|.|.+++ .|+
T Consensus 511 ----------------------------~~~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W 552 (1160)
T KOG0209|consen 511 ----------------------------TPASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGW 552 (1160)
T ss_pred ----------------------------cchhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCc
Confidence 00001112346789999998765433 3489999999987 677
Q ss_pred EEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCC----CcEEEEEecchhHHHHHhhcCChhh
Q 001087 480 FFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD----GRLVLYCKGADSVIYERLANGNEDL 555 (1159)
Q Consensus 480 ~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~----g~~~l~~KGA~~~i~~~~~~~~~~~ 555 (1159)
.+...+ .+..++. .....+|.+.+.|+|..|||||++...+ -+++..+|||||+|.+++.. .
T Consensus 553 ~~~k~~--~v~p~~~--------~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----v 618 (1160)
T KOG0209|consen 553 NLEKKN--SVCPREG--------NGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----V 618 (1160)
T ss_pred ccccCc--ccCCCcC--------CCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----C
Confidence 654322 1111111 1235788999999999999999997643 36899999999999999974 5
Q ss_pred HHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChH
Q 001087 556 KKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVP 635 (1159)
Q Consensus 556 ~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~ 635 (1159)
++++++...+|+++|.|||++|||.+..--.++ .| |.-+|.+|.||+|.|++.+.-||++|++
T Consensus 619 P~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q-------------~r----d~~Re~vEsdLtFaGFlif~CPlK~Ds~ 681 (1160)
T KOG0209|consen 619 PKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQ-------------VR----DLKREDVESDLTFAGFLIFSCPLKPDSK 681 (1160)
T ss_pred chhHHHHHHHHhhccceEEEEecccccccchhh-------------hh----hhhhhhhhhcceeeeeEEEeCCCCccHH
Confidence 667778889999999999999999997422111 11 1234789999999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHH
Q 001087 636 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDE 715 (1159)
Q Consensus 636 etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (1159)
++|+.|++++.++.|+||||+.||.++|+++|+..+...++.+..+.......-...|. .+.-.....-.
T Consensus 682 ~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~-t~~lp~~p~~~--------- 751 (1160)
T KOG0209|consen 682 KTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDG-TIVLPLKPGKK--------- 751 (1160)
T ss_pred HHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCC-ceeecCCCCcc---------
Confidence 99999999999999999999999999999999998876665555443211110000000 00000000000
Q ss_pred hhhhccccCCCceEEEEcccchhHhcchhH-HHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCH
Q 001087 716 AQQYIHSISGEKLALIIDGKCLMYALDPSL-RVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDV 794 (1159)
Q Consensus 716 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~-~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv 794 (1159)
...--..+.|.|+|.+|+++...+. ...+. +.-||||++|.||..|+..+ ++.|+.|||||||.|||
T Consensus 752 -----~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~------hv~VfARvaP~QKE~ii~tl-K~~Gy~TLMCGDGTNDV 819 (1160)
T KOG0209|consen 752 -----KTLLAETHDLCITGSALDHLQATDQLRRLIP------HVWVFARVAPKQKEFIITTL-KKLGYVTLMCGDGTNDV 819 (1160)
T ss_pred -----chhhhhhhhhhcchhHHHHHhhhHHHHHhhh------heeEEEeeChhhHHHHHHHH-HhcCeEEEEecCCCcch
Confidence 0000134578999999999987663 33333 34599999999999999999 68999999999999999
Q ss_pred HHHHhcccceee-cCccch---------------h---------------------------------------------
Q 001087 795 SMIQAAHIGVGI-SGQEGM---------------Q--------------------------------------------- 813 (1159)
Q Consensus 795 ~mL~~AdVGIgi-sg~e~~---------------q--------------------------------------------- 813 (1159)
+|||+|||||++ .+.+.+ .
T Consensus 820 GALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~ 899 (1160)
T KOG0209|consen 820 GALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDK 899 (1160)
T ss_pred hhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcc
Confidence 999999999987 443200 0
Q ss_pred ---------hhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHH
Q 001087 814 ---------AVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSL 883 (1159)
Q Consensus 814 ---------A~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~~~l~~ 883 (1159)
|..||.|.----+..... ++..||......-++ ||-.++-...-.|+..--+---.=|.+.|.+.
T Consensus 900 ~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQM-----fKILALN~LisAYslSvlyldGVKfgD~QaTi 974 (1160)
T KOG0209|consen 900 GDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQM-----FKILALNCLISAYSLSVLYLDGVKFGDTQATI 974 (1160)
T ss_pred cCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHH-----HHHHHHHHHHHHHHHHHhhhcCceecchhHhH
Confidence 112222222111122222 578899887665444 44444444433343321111111256677666
Q ss_pred HHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hccCCccCCC---C
Q 001087 884 YNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSATGQNSS---G 959 (1159)
Q Consensus 884 ~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~~~~~~~~---g 959 (1159)
--++.. +.++.+....+=+. |-++.|...+||...+...+.+-+.|-..++++.- +......... -
T Consensus 975 sGlLla---~cFlfISrskPLet-------LSkeRP~~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~ 1044 (1160)
T KOG0209|consen 975 SGLLLA---ACFLFISRSKPLET-------LSKERPLPNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLE 1044 (1160)
T ss_pred HHHHHH---HHHhheecCCchhh-------HhhcCCCCCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChh
Confidence 555432 33333333322233 33344456789999998888888888887777766 3322211110 1
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHh--hccc--hhhHHHHHHHHHHHHHH-HHHHHhhccCCCCCCCceeeEeeeec-
Q 001087 960 KIFGIWDVSTMAFTCVVVTVNLRLLMM--CNTI--TRFHYITVGGSILAWFL-FVFLYTGIMTPNDRQENVFFVIFVLM- 1033 (1159)
Q Consensus 960 ~~~~~~~~~~~~~~~~v~~~~~~~~l~--~~~~--~~~~~~~i~~si~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 1033 (1159)
...+...+.+.+|......+....+.. -+.| +...+..+..+++.... +..+..-.. +.+...++.+
T Consensus 1045 ~~F~PsllNt~vyiisl~~QvsTFAVNY~G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~-------peLn~~~~lV~ 1117 (1160)
T KOG0209|consen 1045 EKFSPSLLNTTVYIISLAQQVSTFAVNYQGRPFRESLRENKGLLYGLLGSAGVIIALATGSS-------PELNEKFELVD 1117 (1160)
T ss_pred cccChhhhhhHHHHHHHHHHHHHhhhhccCcchhhhhhhccchHHHHHHHHHHHHHHHhccC-------hhHHhheeeec
Confidence 112222344555544333222222211 1112 12234444444443322 222222111 4455666666
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 001087 1034 STFYFYFTLILVPVLALLGDFIFQGVQRWFSP 1065 (1159)
Q Consensus 1034 ~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~~p 1065 (1159)
..-.|-..++.+.++-++..+++.-+.+++++
T Consensus 1118 mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~ 1149 (1160)
T KOG0209|consen 1118 MPQDFKIKLLAVLVLDFVLCYLVERVLKFFFG 1149 (1160)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 44456666666666666666777666667766
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.8e-68 Score=646.84 Aligned_cols=477 Identities=31% Similarity=0.449 Sum_probs=401.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhHhhccceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCe
Q 001087 39 NVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 118 (1159)
Q Consensus 39 ~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~ 118 (1159)
.+++++..++....+...++..+...++.+++++++|+|+| ++++++++|+|||+|.|++||.+|||++++++ .
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-----~ 76 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-----S 76 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-----c
Confidence 45667777777777777777777777777899999999999 99999999999999999999999999999985 5
Q ss_pred EEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCC
Q 001087 119 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 198 (1159)
Q Consensus 119 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 198 (1159)
|+||||+|||||.|+.|++++. .|+|+.+.+|.
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~~---------------------------v~~gs~~~~G~-------------------- 109 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGDA---------------------------VFAGTYVFNGT-------------------- 109 (499)
T ss_pred EEEEcccccCCCCCeeeccCCc---------------------------cccCcEEeccE--------------------
Confidence 7899999999999999998653 38888888887
Q ss_pred cEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCcc
Q 001087 199 YIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLI-LALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVE 274 (1159)
Q Consensus 199 ~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~-~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~ 274 (1159)
+.+.|..+|.+|.. ..........+++++++.+++. .++.++.++++++.++++.......
T Consensus 110 -~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~-------------- 174 (499)
T TIGR01494 110 -LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP-------------- 174 (499)
T ss_pred -EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--------------
Confidence 88899999999854 3333344455789999999998 6777777777766665543321100
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEE
Q 001087 275 DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYI 354 (1159)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I 354 (1159)
. .+...+.+++++++.+|||+|+++++++...+ ..++ .++++++|+++.+|+||+++++
T Consensus 175 ------~----~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~-~~~~----------~~~gilvk~~~~lE~l~~v~~i 233 (499)
T TIGR01494 175 ------N----SIFKIFLRALILLVIAIPIALPLAVTIALAVG-DARL----------AKKGIVVRSLNALEELGKVDYI 233 (499)
T ss_pred ------c----cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH-HHHH----------HHCCcEEechhhhhhccCCcEE
Confidence 0 12347889999999999999999999999999 7777 6789999999999999999999
Q ss_pred EecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhH
Q 001087 355 FSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDAC 434 (1159)
Q Consensus 355 ~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (1159)
|||||||||+|+|+|.++++.+.
T Consensus 234 ~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------------------- 256 (499)
T TIGR01494 234 CSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------------------- 256 (499)
T ss_pred EeeCCCccccCceEEEEEEecCC---------------------------------------------------------
Confidence 99999999999999999864321
Q ss_pred HHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeec
Q 001087 435 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLE 514 (1159)
Q Consensus 435 ~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~ 514 (1159)
++.++||+|.|++++++..+ ++..|
T Consensus 257 ------------------------~~~s~hp~~~ai~~~~~~~~-------------------------------~~~~~ 281 (499)
T TIGR01494 257 ------------------------EYLSGHPDERALVKSAKWKI-------------------------------LNVFE 281 (499)
T ss_pred ------------------------CcCCCChHHHHHHHHhhhcC-------------------------------cceec
Confidence 01247999999999986421 13469
Q ss_pred CCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001087 515 FNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 594 (1159)
Q Consensus 515 F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~ 594 (1159)
|++.+|+|+++++.+++ .|+||+++.+.++|.. +.+.+++++.+|+|++++|++.
T Consensus 282 f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~~~~~a~~~-------------- 336 (499)
T TIGR01494 282 FSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLRVLAVASKE-------------- 336 (499)
T ss_pred cCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCEEEEEEECC--------------
Confidence 99999999999987444 4789999999988742 2344567889999999999742
Q ss_pred HHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCce
Q 001087 595 QAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 674 (1159)
Q Consensus 595 ~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~ 674 (1159)
+++|+++++|++|++++++|+.|+++|+++||+|||+++||..+|+++|+
T Consensus 337 ------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi------ 386 (499)
T TIGR01494 337 ------------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI------ 386 (499)
T ss_pred ------------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc------
Confidence 69999999999999999999999999999999999999999999998864
Q ss_pred EEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhh
Q 001087 675 QFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSL 754 (1159)
Q Consensus 675 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~ 754 (1159)
T Consensus 387 -------------------------------------------------------------------------------- 386 (499)
T TIGR01494 387 -------------------------------------------------------------------------------- 386 (499)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchh-hh
Q 001087 755 NCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL-LL 833 (1159)
Q Consensus 755 ~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~l-ll 833 (1159)
+||++|+||+++|+.+ |..|+.|+|+|||+||+|||++|||||++. |+.+||+++.++++.... ++
T Consensus 387 ------~~~~~p~~K~~~v~~l-~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~ 453 (499)
T TIGR01494 387 ------FARVTPEEKAALVEAL-QKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDAL 453 (499)
T ss_pred ------eeccCHHHHHHHHHHH-HHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHH
Confidence 4778999999999999 677899999999999999999999999994 688999999997776655 79
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 834 VHGRWSYLRICKVVLYFFYKNLTFTLTQFWF 864 (1159)
Q Consensus 834 ~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~ 864 (1159)
.+||+.++++++++.|.+++|++.....+++
T Consensus 454 ~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 454 KEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987776653
No 25
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-64 Score=611.21 Aligned_cols=524 Identities=20% Similarity=0.221 Sum_probs=412.5
Q ss_pred hhhhHHHHHHHHHHhh-cccccc--cccchhhhHHHHHHHHHHHHHHHHHHHhhhhHh------hccceEEEee-CCeEE
Q 001087 13 RRVANCYFLMISILST-TPMSPV--NPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQ-GQRWV 82 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~-i~~s~~--~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~------~n~~~~~V~r-~g~~~ 82 (1159)
++..|+-+|+...... +.++.+ -+..++.--++++++-.+.+++|++.+.|+.+. +.++++++++ ||+.+
T Consensus 144 ~~~~~md~Lv~la~~~A~~~s~~~~~~~~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~ 223 (713)
T COG2217 144 RGRLNMDTLVALATIGAYAYSLYATLFPVYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEE 223 (713)
T ss_pred cCCCChHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEE
Confidence 6667777776432221 111111 000222233445555566689999888876443 3468887776 45599
Q ss_pred EeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCC
Q 001087 83 SIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQP 162 (1159)
Q Consensus 83 ~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p 162 (1159)
+++.++|++||+|.|++||+||+|++++++++ .||||+|||||.|+.|.+++..
T Consensus 224 ~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-----~vDeS~iTGEs~PV~k~~Gd~V--------------------- 277 (713)
T COG2217 224 EVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-----SVDESMLTGESLPVEKKPGDEV--------------------- 277 (713)
T ss_pred EEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-----EeecchhhCCCCCEecCCCCEE---------------------
Confidence 99999999999999999999999999998665 4999999999999999999855
Q ss_pred CCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHH
Q 001087 163 NNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALF 239 (1159)
Q Consensus 163 n~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~ 239 (1159)
|+||++.+|. +...|+.+|.||.+ .+..++++.+|+|+|+..|++..++.
T Consensus 278 ------~aGtiN~~G~---------------------l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fv 330 (713)
T COG2217 278 ------FAGTVNLDGS---------------------LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFV 330 (713)
T ss_pred ------eeeEEECCcc---------------------EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccH
Confidence 9999999998 99999999999954 55566888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhh
Q 001087 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQST 319 (1159)
Q Consensus 240 ~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~ 319 (1159)
++.++++++++++|.+.... .| -..+.+++.+++..|||+|.++.+++...+ .
T Consensus 331 p~vl~ia~l~f~~w~~~~~~-~~-------------------------~~a~~~a~avLVIaCPCALgLAtP~ai~~g-~ 383 (713)
T COG2217 331 PVVLVIAALTFALWPLFGGG-DW-------------------------ETALYRALAVLVIACPCALGLATPTAILVG-I 383 (713)
T ss_pred HHHHHHHHHHHHHHHHhcCC-cH-------------------------HHHHHHHHhheeeeCccHHHhHHHHHHHHH-H
Confidence 99999998887765444321 11 127888999999999999999999999998 7
Q ss_pred hhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCc
Q 001087 320 QYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIP 399 (1159)
Q Consensus 320 ~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~ 399 (1159)
... +++++++|+.+.+|.|+++|+|+||||||||+|+|++..+...+. +
T Consensus 384 g~a----------A~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~------------------- 432 (713)
T COG2217 384 GRA----------ARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D------------------- 432 (713)
T ss_pred HHH----------HhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C-------------------
Confidence 777 799999999999999999999999999999999999998854321 0
Q ss_pred ccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCc
Q 001087 400 EVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGF 479 (1159)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~ 479 (1159)
..+++...+. .+-.++||...|++++|++.|.
T Consensus 433 ----------------------------------e~~~L~laAa--------------lE~~S~HPiA~AIv~~a~~~~~ 464 (713)
T COG2217 433 ----------------------------------EDELLALAAA--------------LEQHSEHPLAKAIVKAAAERGL 464 (713)
T ss_pred ----------------------------------HHHHHHHHHH--------------HHhcCCChHHHHHHHHHHhcCC
Confidence 0122222221 1123689999999999998762
Q ss_pred EEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHH
Q 001087 480 FFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVT 559 (1159)
Q Consensus 480 ~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~ 559 (1159)
.-. .. ...+| ..++--+. +|+ .+.-|.+..+.+.-. .... .
T Consensus 465 ~~~----------------------~~---~~~i~------G~Gv~~~v-~g~--~v~vG~~~~~~~~~~----~~~~-~ 505 (713)
T COG2217 465 PDV----------------------ED---FEEIP------GRGVEAEV-DGE--RVLVGNARLLGEEGI----DLPL-L 505 (713)
T ss_pred CCc----------------------cc---eeeec------cCcEEEEE-CCE--EEEEcCHHHHhhcCC----Cccc-h
Confidence 100 00 11111 22222222 342 333488877754211 1111 4
Q ss_pred HHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHH
Q 001087 560 REHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIE 639 (1159)
Q Consensus 560 ~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~ 639 (1159)
.+..+.+..+|..++.++. |-+++|+++++|++|++++++|+
T Consensus 506 ~~~~~~~~~~G~t~v~va~--------------------------------------dg~~~g~i~~~D~~R~~a~~aI~ 547 (713)
T COG2217 506 SERIEALESEGKTVVFVAV--------------------------------------DGKLVGVIALADELRPDAKEAIA 547 (713)
T ss_pred hhhHHHHHhcCCeEEEEEE--------------------------------------CCEEEEEEEEeCCCChhHHHHHH
Confidence 5667788899998888884 56899999999999999999999
Q ss_pred HHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhh
Q 001087 640 TLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQY 719 (1159)
Q Consensus 640 ~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (1159)
.|++.||++.|||||++.||.+||+++||..
T Consensus 548 ~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------------------------------------- 578 (713)
T COG2217 548 ALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------------------------------------- 578 (713)
T ss_pred HHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-------------------------------------------------
Confidence 9999999999999999999999999999921
Q ss_pred ccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHh
Q 001087 720 IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQA 799 (1159)
Q Consensus 720 ~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~ 799 (1159)
+.+.+.|+||+++|+.+ |..|++|+|||||+||+|||.+
T Consensus 579 ----------------------------------------v~AellPedK~~~V~~l-~~~g~~VamVGDGINDAPALA~ 617 (713)
T COG2217 579 ----------------------------------------VRAELLPEDKAEIVREL-QAEGRKVAMVGDGINDAPALAA 617 (713)
T ss_pred ----------------------------------------heccCCcHHHHHHHHHH-HhcCCEEEEEeCCchhHHHHhh
Confidence 88999999999999999 6789999999999999999999
Q ss_pred cccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 800 AHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWF 864 (1159)
Q Consensus 800 AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~ 864 (1159)
|||||+| +|+|. |.++||+++.+.+..... ++..+|..+++|++++.|.|.+|.+++.+..+.
T Consensus 618 AdVGiAmG~GtDv--A~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 618 ADVGIAMGSGTDV--AIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred cCeeEeecCCcHH--HHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999 78999 999999999999887766 799999999999999999999999887665543
No 26
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-64 Score=563.92 Aligned_cols=554 Identities=19% Similarity=0.240 Sum_probs=422.4
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhh---ccceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEE
Q 001087 34 VNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTI---NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFL 110 (1159)
Q Consensus 34 ~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL 110 (1159)
..|..... ++..+++++...++|+++.-..-.++ -..+++|+|||+|.+++...|+||||+.++.|+.+|||++||
T Consensus 95 ~DW~DF~g-I~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl 173 (942)
T KOG0205|consen 95 PDWQDFVG-ICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLL 173 (942)
T ss_pred cchhhhhh-hheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCcccee
Confidence 34544433 34445555556778887766553333 357899999999999999999999999999999999999999
Q ss_pred eecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeec
Q 001087 111 ASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLR 190 (1159)
Q Consensus 111 ~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llr 190 (1159)
.+.-++ ||+|.|||||.|+.|.+++++ |+|+.+-+|+
T Consensus 174 ~gD~Lk----iDQSAlTGESLpvtKh~gd~v---------------------------fSgSTcKqGE------------ 210 (942)
T KOG0205|consen 174 EGDPLK----IDQSALTGESLPVTKHPGDEV---------------------------FSGSTCKQGE------------ 210 (942)
T ss_pred cCCccc----cchhhhcCCccccccCCCCce---------------------------ecccccccce------------
Confidence 998776 999999999999999999866 9999999988
Q ss_pred cceeecCCcEEEEEEEeccchhhhhccC--CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccC
Q 001087 191 GCSLRNTEYIIGAVIFAGHETKVMMNSM--NIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHN 268 (1159)
Q Consensus 191 Gs~l~nt~~i~gvVv~tG~~Tk~~~n~~--~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~ 268 (1159)
+.+||++||..|-.++.+. .+.....++++.++-+..++.+.+. +.+++-+...++.... -|-
T Consensus 211 ---------~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~R-~~r---- 275 (942)
T KOG0205|consen 211 ---------IEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIA-LGMLIEITVMYPIQHR-LYR---- 275 (942)
T ss_pred ---------EEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhhh-hhh----
Confidence 9999999999996654432 2355678999999998776654332 2222222222222111 000
Q ss_pred CCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccc
Q 001087 269 MGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEEL 348 (1159)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~L 348 (1159)
...-+.+++++.-||++||..+++..+++ +.++ ++++++++..+++|+|
T Consensus 276 --------------------~~i~nLlvllIGgiPiamPtVlsvTMAiG-s~rL----------aqqgAItkrmtAIEem 324 (942)
T KOG0205|consen 276 --------------------DGIDNLLVLLIGGIPIAMPTVLSVTMAIG-SHRL----------SQQGAITKRMTAIEEM 324 (942)
T ss_pred --------------------hhhhheheeeecccccccceeeeehhhHH-HHHH----------HhcccHHHHHHHHHHh
Confidence 02223455666779999999999999999 8888 7899999999999999
Q ss_pred cCceEEEecCCCCCCCCceEEEE----EEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhcc
Q 001087 349 GQVEYIFSDKTGTLTRNLMEFFK----CSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGA 424 (1159)
Q Consensus 349 G~V~~I~sDKTGTLT~n~m~~~~----~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (1159)
+.+|++|||||||||.|++.+.+ ++..| ...
T Consensus 325 AGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g------------------------------------v~~--------- 359 (942)
T KOG0205|consen 325 AGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG------------------------------------VDK--------- 359 (942)
T ss_pred hCceEEeecCcCceeecceecCcCcceeeecC------------------------------------CCh---------
Confidence 99999999999999999998865 11111 111
Q ss_pred ccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccce
Q 001087 425 WRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQD 504 (1159)
Q Consensus 425 ~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~ 504 (1159)
++.++..|.. ... +..+..+.|++...++- +...
T Consensus 360 ----------D~~~L~A~rA--sr~-----------en~DAID~A~v~~L~dP-----------------------Kear 393 (942)
T KOG0205|consen 360 ----------DDVLLTAARA--SRK-----------ENQDAIDAAIVGMLADP-----------------------KEAR 393 (942)
T ss_pred ----------HHHHHHHHHH--hhh-----------cChhhHHHHHHHhhcCH-----------------------HHHh
Confidence 1222222222 111 12567888998875430 1135
Q ss_pred EEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHH
Q 001087 505 VCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPD 584 (1159)
Q Consensus 505 ~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~ 584 (1159)
..|+.++.+|||+..||-...+.+|||+....+||||+.|++.|.... +.++...+.+++||+.|+|.|++|++..++.
T Consensus 394 a~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~vh~~id~~AeRGlRSLgVArq~v~e~ 472 (942)
T KOG0205|consen 394 AGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPERVHSIIDKFAERGLRSLAVARQEVPEK 472 (942)
T ss_pred hCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC-cchHHHHHHHHHHHHhcchhhhhhhhccccc
Confidence 678999999999999999999999999999999999999999998754 6888999999999999999999999988764
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHH
Q 001087 585 MYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAY 664 (1159)
Q Consensus 585 e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~ 664 (1159)
.- +.-..-.+++|..-+-||+|.+..+||..-...|..|.|+|||...-|...++
T Consensus 473 ~~-------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgr 527 (942)
T KOG0205|consen 473 TK-------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 527 (942)
T ss_pred cc-------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhh
Confidence 21 11235678999999999999999999999999999999999999999999999
Q ss_pred HcCccccCce---EEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhc
Q 001087 665 ACNLINNEMK---QFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYAL 741 (1159)
Q Consensus 665 ~~gl~~~~~~---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l 741 (1159)
.+|+-++-.+ +...+.++ -+.|.......
T Consensus 528 rlgmgtnmypss~llG~~~~~------------------------------------------------~~~~~~v~eli 559 (942)
T KOG0205|consen 528 RLGMGTNMYPSSALLGLGKDG------------------------------------------------SMPGSPVDELI 559 (942)
T ss_pred hhccccCcCCchhhccCCCCC------------------------------------------------CCCCCcHHHHh
Confidence 9988654221 00000000 01111111111
Q ss_pred chhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeecCccchhhhhcccee
Q 001087 742 DPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFA 821 (1159)
Q Consensus 742 ~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~ 821 (1159)
+ ++.=|+.+-|+||..+|+.+ |.+|++++|+|||+||+|+|+.||+||++.+.-.. |..+||++
T Consensus 560 ---------e-----~adgfAgVfpehKy~iV~~L-q~r~hi~gmtgdgvndapaLKkAdigiava~atda-ar~asdiV 623 (942)
T KOG0205|consen 560 ---------E-----KADGFAGVFPEHKYEIVKIL-QERKHIVGMTGDGVNDAPALKKADIGIAVADATDA-ARSASDIV 623 (942)
T ss_pred ---------h-----hccCccccCHHHHHHHHHHH-hhcCceecccCCCcccchhhcccccceeeccchhh-hcccccEE
Confidence 1 23478999999999999999 88999999999999999999999999999554332 78899999
Q ss_pred eccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 001087 822 IAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFT 858 (1159)
Q Consensus 822 i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~ 858 (1159)
+..-....+. .+..+|.+|+|+.....|.+.-.+-.+
T Consensus 624 ltepglSviI~avltSraIfqrmknytiyavsitiriv 661 (942)
T KOG0205|consen 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661 (942)
T ss_pred EcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH
Confidence 9998887776 688999999999999888876665443
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=5.6e-61 Score=599.45 Aligned_cols=485 Identities=20% Similarity=0.236 Sum_probs=387.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHh------hccceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCe
Q 001087 45 LVLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 118 (1159)
Q Consensus 45 ~vl~vs~ik~~~ed~~r~~~d~~------~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~ 118 (1159)
+++++..+.+.+|++.++|+.+. +++.+++|+|+|++++++.++|+|||+|.|++||.||||+++++++
T Consensus 211 ~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~----- 285 (741)
T PRK11033 211 MVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPF----- 285 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECc-----
Confidence 44445556688888877776543 3467899999999999999999999999999999999999999854
Q ss_pred EEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCC
Q 001087 119 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 198 (1159)
Q Consensus 119 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 198 (1159)
+.||||.|||||.|+.|++++. +|+|+++.+|.
T Consensus 286 ~~vdes~lTGEs~Pv~k~~Gd~---------------------------V~aGt~~~~G~-------------------- 318 (741)
T PRK11033 286 ASFDESALTGESIPVERATGEK---------------------------VPAGATSVDRL-------------------- 318 (741)
T ss_pred EEeecccccCCCCCEecCCCCe---------------------------eccCCEEcCce--------------------
Confidence 4699999999999999998763 49999999988
Q ss_pred cEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccC
Q 001087 199 YIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVED 275 (1159)
Q Consensus 199 ~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~ 275 (1159)
+.+.|+.+|.+|.+ .+...+++.+++|+|+.+|++..++.+++++++++.++++.++... +|
T Consensus 319 -~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~-~~------------- 383 (741)
T PRK11033 319 -VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA-PW------------- 383 (741)
T ss_pred -EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CH-------------
Confidence 99999999999954 4445677778999999999999999999999998887765332211 11
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEE
Q 001087 276 DQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIF 355 (1159)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~ 355 (1159)
-..+.+++.+++..|||+|.++.+++.... .... +++++++|+.+.+|.|++||+||
T Consensus 384 ------------~~~i~~a~svlviacPcaL~latP~a~~~~-l~~a----------ar~gilik~~~alE~l~~v~~v~ 440 (741)
T PRK11033 384 ------------QEWIYRGLTLLLIGCPCALVISTPAAITSG-LAAA----------ARRGALIKGGAALEQLGRVTTVA 440 (741)
T ss_pred ------------HHHHHHHHHHHHHhchhhhhhhhHHHHHHH-HHHH----------HHCCeEEcCcHHHHHhhCCCEEE
Confidence 115667889999999999977777776666 4444 68899999999999999999999
Q ss_pred ecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHH
Q 001087 356 SDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACK 435 (1159)
Q Consensus 356 sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1159)
||||||||+|+|++.++...+. + ...
T Consensus 441 fDKTGTLT~g~~~v~~~~~~~~-~-----------------------------------------------------~~~ 466 (741)
T PRK11033 441 FDKTGTLTEGKPQVTDIHPATG-I-----------------------------------------------------SES 466 (741)
T ss_pred EeCCCCCcCCceEEEEEEecCC-C-----------------------------------------------------CHH
Confidence 9999999999999998753211 0 001
Q ss_pred HHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecC
Q 001087 436 EFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEF 515 (1159)
Q Consensus 436 ~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F 515 (1159)
+++...+. + + ..+.||.+.|+++++++.|.. +||
T Consensus 467 ~~l~~aa~---~--e---------~~s~hPia~Ai~~~a~~~~~~--------------------------------~~~ 500 (741)
T PRK11033 467 ELLALAAA---V--E---------QGSTHPLAQAIVREAQVRGLA--------------------------------IPE 500 (741)
T ss_pred HHHHHHHH---H--h---------cCCCCHHHHHHHHHHHhcCCC--------------------------------CCC
Confidence 22222221 1 1 124799999999999876542 345
Q ss_pred CCCCceEE---EEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHH
Q 001087 516 NSTRKRQS---VVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEK 592 (1159)
Q Consensus 516 ~s~rkrms---viv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~ 592 (1159)
.++++.+. +... -+|+.+ .-|+++.+.+ + .+...+.++++..+|+|++++|+
T Consensus 501 ~~~~~~~~g~Gv~~~-~~g~~~--~ig~~~~~~~-~-------~~~~~~~~~~~~~~g~~~v~va~-------------- 555 (741)
T PRK11033 501 AESQRALAGSGIEGQ-VNGERV--LICAPGKLPP-L-------ADAFAGQINELESAGKTVVLVLR-------------- 555 (741)
T ss_pred CcceEEEeeEEEEEE-ECCEEE--EEecchhhhh-c-------cHHHHHHHHHHHhCCCEEEEEEE--------------
Confidence 55555542 2112 244432 2388887754 1 12344556788999999999995
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccC
Q 001087 593 FIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE 672 (1159)
Q Consensus 593 ~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~ 672 (1159)
|.+++|+++++|++|+|++++|+.|+++|++++|+|||+..+|..+|+++||.
T Consensus 556 ------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~--- 608 (741)
T PRK11033 556 ------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID--- 608 (741)
T ss_pred ------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---
Confidence 56899999999999999999999999999999999999999999999999982
Q ss_pred ceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHH
Q 001087 673 MKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNL 752 (1159)
Q Consensus 673 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l 752 (1159)
T Consensus 609 -------------------------------------------------------------------------------- 608 (741)
T PRK11033 609 -------------------------------------------------------------------------------- 608 (741)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh
Q 001087 753 SLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 753 ~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l 831 (1159)
..++++|+||..+|+.++ + ++.|+|||||.||+|||++|||||++ +|++. |.++||+++.+.++....
T Consensus 609 -------~~~~~~p~~K~~~v~~l~-~-~~~v~mvGDgiNDapAl~~A~vgia~g~~~~~--a~~~adivl~~~~l~~l~ 677 (741)
T PRK11033 609 -------FRAGLLPEDKVKAVTELN-Q-HAPLAMVGDGINDAPAMKAASIGIAMGSGTDV--ALETADAALTHNRLRGLA 677 (741)
T ss_pred -------eecCCCHHHHHHHHHHHh-c-CCCEEEEECCHHhHHHHHhCCeeEEecCCCHH--HHHhCCEEEecCCHHHHH
Confidence 345678999999999995 3 35899999999999999999999998 56666 889999999988876665
Q ss_pred -hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 832 -LLVHGRWSYLRICKVVLYFFYKNLTFTLTQF 862 (1159)
Q Consensus 832 -ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~ 862 (1159)
++..||..+++|++++.|.+.+|+++..+.+
T Consensus 678 ~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 678 QMIELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999987765544
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-60 Score=558.05 Aligned_cols=505 Identities=19% Similarity=0.196 Sum_probs=401.7
Q ss_pred HHHHHHHHHHHHHhhhhH------hhccceEEEeeCCe-EEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEE
Q 001087 49 VSLIKEAWEDWKRFQNDM------TINSTPVEVLQGQR-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYI 121 (1159)
Q Consensus 49 vs~ik~~~ed~~r~~~d~------~~n~~~~~V~r~g~-~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~V 121 (1159)
+.++.+.+|...++|+-. .+.+.++.++.+|+ .++|+.+.|++||+|+|.+|++||+|+++++ |.|+|
T Consensus 350 fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~-----Gss~V 424 (951)
T KOG0207|consen 350 FITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD-----GSSEV 424 (951)
T ss_pred HHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEe-----Cceee
Confidence 334557888888887633 34578899999986 8999999999999999999999999999998 55679
Q ss_pred eccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEE
Q 001087 122 ETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYII 201 (1159)
Q Consensus 122 dts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~ 201 (1159)
|||.+|||+.|+.|++++.. .+|+++.+|. .+
T Consensus 425 DEs~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~---------------------l~ 456 (951)
T KOG0207|consen 425 DESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT---------------------LL 456 (951)
T ss_pred chhhccCCceecccCCCCee---------------------------eeeeecCCce---------------------EE
Confidence 99999999999999998844 8999999998 89
Q ss_pred EEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCC
Q 001087 202 GAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQF 278 (1159)
Q Consensus 202 gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~ 278 (1159)
.-++.+|.||.+ .+..++++..++|+|+.+|++..++.++++++++.++++|.+......||..
T Consensus 457 VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~------------- 523 (951)
T KOG0207|consen 457 VKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPR------------- 523 (951)
T ss_pred EEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcc-------------
Confidence 999999999954 5556788888999999999999999999999999999888877653333321
Q ss_pred CCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecC
Q 001087 279 NPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDK 358 (1159)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDK 358 (1159)
..+..+...|..++.+++.+|||+|.++.+.+.+.+ ..-- +.+|+++|..+.+|.+.+|++|.|||
T Consensus 524 ---~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmva-tgvg----------A~nGvLIKGge~LE~~hkv~tVvFDK 589 (951)
T KOG0207|consen 524 ---SFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVA-TGVG----------ATNGVLIKGGEALEKAHKVKTVVFDK 589 (951)
T ss_pred ---hhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEE-echh----------hhcceEEcCcHHHHHHhcCCEEEEcC
Confidence 111233457888999999999999999888766655 3333 68999999999999999999999999
Q ss_pred CCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHH
Q 001087 359 TGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFF 438 (1159)
Q Consensus 359 TGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1159)
|||||+|++.+.++.+-+.. -..++++
T Consensus 590 TGTLT~G~~~V~~~~~~~~~-----------------------------------------------------~~~~e~l 616 (951)
T KOG0207|consen 590 TGTLTEGKPTVVDFKSLSNP-----------------------------------------------------ISLKEAL 616 (951)
T ss_pred CCceecceEEEEEEEecCCc-----------------------------------------------------ccHHHHH
Confidence 99999999999988654321 0122333
Q ss_pred HHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCC
Q 001087 439 RCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNST 518 (1159)
Q Consensus 439 ~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~ 518 (1159)
...+.- | -.++||...|++++|++.+-. ++. -.++..-.|...
T Consensus 617 ~~v~a~-----E---------s~SeHPig~AIv~yak~~~~~-----~~~------------------~~~~~~~~~pg~ 659 (951)
T KOG0207|consen 617 ALVAAM-----E---------SGSEHPIGKAIVDYAKEKLVE-----PNP------------------EGVLSFEYFPGE 659 (951)
T ss_pred HHHHHH-----h---------cCCcCchHHHHHHHHHhcccc-----cCc------------------cccceeecccCC
Confidence 222211 1 124799999999999987611 000 011122223222
Q ss_pred CceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHh
Q 001087 519 RKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKS 598 (1159)
Q Consensus 519 rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~ 598 (1159)
.+...+.+ +++. .+-|.-+.+-. ++....++.++.+++-...|..+.++|.
T Consensus 660 g~~~~~~~---~~~~--i~iGN~~~~~r----~~~~~~~~i~~~~~~~e~~g~tvv~v~v-------------------- 710 (951)
T KOG0207|consen 660 GIYVTVTV---DGNE--VLIGNKEWMSR----NGCSIPDDILDALTESERKGQTVVYVAV-------------------- 710 (951)
T ss_pred CcccceEE---eeeE--EeechHHHHHh----cCCCCchhHHHhhhhHhhcCceEEEEEE--------------------
Confidence 22222222 2222 23377555533 2222345577778888899999999996
Q ss_pred hhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEE
Q 001087 599 SLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFII 678 (1159)
Q Consensus 599 ~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i 678 (1159)
|-++.|+++++|++|+|+..+|+.|++.||++.||||||..||.++|+++|+-
T Consensus 711 ------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--------- 763 (951)
T KOG0207|consen 711 ------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--------- 763 (951)
T ss_pred ------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc---------
Confidence 67899999999999999999999999999999999999999999999999951
Q ss_pred ecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCc
Q 001087 679 TSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSS 758 (1159)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~ 758 (1159)
T Consensus 764 -------------------------------------------------------------------------------- 763 (951)
T KOG0207|consen 764 -------------------------------------------------------------------------------- 763 (951)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhh
Q 001087 759 VVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHG 836 (1159)
Q Consensus 759 vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~G 836 (1159)
.|+|.+.|+||+++|+.+ |+.|+.|+|+|||.||+|||.+|||||+| .|++. |.++||+++...+....+ .+..+
T Consensus 764 ~V~aev~P~~K~~~Ik~l-q~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v--AieaADIVLmrn~L~~v~~ai~LS 840 (951)
T KOG0207|consen 764 NVYAEVLPEQKAEKIKEI-QKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDV--AIEAADIVLMRNDLRDVPFAIDLS 840 (951)
T ss_pred eEEeccCchhhHHHHHHH-HhcCCcEEEEeCCCCccHHHHhhccceeeccccHH--HHhhCCEEEEccchhhhHHHHHHH
Confidence 299999999999999999 67789999999999999999999999999 77887 999999999999887776 68999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 837 RWSYLRICKVVLYFFYKNLTFTLTQF 862 (1159)
Q Consensus 837 r~~~~ri~~~i~~~~~kni~~~~~~~ 862 (1159)
|...+|++.++.|++.+|++.+.+..
T Consensus 841 rkt~~rIk~N~~~A~~yn~~~IpIAa 866 (951)
T KOG0207|consen 841 RKTVKRIKLNFVWALIYNLVGIPIAA 866 (951)
T ss_pred HHHHhhHHHHHHHHHHHHHhhhhhhe
Confidence 99999999999999999998655543
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=2.9e-59 Score=571.42 Aligned_cols=490 Identities=20% Similarity=0.247 Sum_probs=382.7
Q ss_pred HHHHHHHHHHHHHHhhhhHh------hccceEEEeeCC-eEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEE
Q 001087 48 LVSLIKEAWEDWKRFQNDMT------INSTPVEVLQGQ-RWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCY 120 (1159)
Q Consensus 48 ~vs~ik~~~ed~~r~~~d~~------~n~~~~~V~r~g-~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~ 120 (1159)
++..+.++++.+.++++.+. .++..++|+|+| +++++++++|+|||+|.|++||.||||+++++++ +.
T Consensus 26 ~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g~-----~~ 100 (556)
T TIGR01525 26 FLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGE-----SE 100 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEecc-----eE
Confidence 33334456666666555443 345789999996 9999999999999999999999999999999854 56
Q ss_pred EeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcE
Q 001087 121 IETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYI 200 (1159)
Q Consensus 121 Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i 200 (1159)
||||.|||||.|+.|++++ .+|+||.+.+|. +
T Consensus 101 vdes~lTGEs~pv~k~~g~---------------------------~v~aGt~v~~g~---------------------~ 132 (556)
T TIGR01525 101 VDESALTGESMPVEKKEGD---------------------------EVFAGTINGDGS---------------------L 132 (556)
T ss_pred EeehhccCCCCCEecCCcC---------------------------EEeeceEECCce---------------------E
Confidence 9999999999999998765 359999998888 9
Q ss_pred EEEEEEeccchhhhh---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCC
Q 001087 201 IGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQ 277 (1159)
Q Consensus 201 ~gvVv~tG~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~ 277 (1159)
+++|+.||.+|.+.+ .....+.+++++++.++++..++.++.++++++.++.+.+...
T Consensus 133 ~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~------------------- 193 (556)
T TIGR01525 133 TIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA------------------- 193 (556)
T ss_pred EEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------------
Confidence 999999999996644 3345566789999999999999999888888887766543211
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEec
Q 001087 278 FNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSD 357 (1159)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sD 357 (1159)
. ..+..++.+++..||++|+++++++.... ..++ .++++++|+++.+|.||++|++|||
T Consensus 194 --~--------~~~~~~~~vlv~~~P~al~l~~~~~~~~~-~~~~----------~~~gilvk~~~~le~l~~v~~i~fD 252 (556)
T TIGR01525 194 --L--------GALYRALAVLVVACPCALGLATPVAILVA-IGVA----------ARRGILIKGGDALEKLAKVKTVVFD 252 (556)
T ss_pred --c--------hHHHHHHHHHhhccccchhehhHHHHHHH-HHHH----------HHCCceecCchHHHHhhcCCEEEEe
Confidence 0 26778899999999999999999999998 8877 7899999999999999999999999
Q ss_pred CCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHH
Q 001087 358 KTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEF 437 (1159)
Q Consensus 358 KTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (1159)
||||||+|+|++.++...+... . ...++
T Consensus 253 KTGTLT~~~~~v~~~~~~~~~~--------------------------------------------------~--~~~~~ 280 (556)
T TIGR01525 253 KTGTLTTGKPTVVDVEPLDDAS--------------------------------------------------I--SEEEL 280 (556)
T ss_pred CCCCCcCCceEEEEEEecCCCC--------------------------------------------------c--cHHHH
Confidence 9999999999999876432110 0 01122
Q ss_pred HHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCC
Q 001087 438 FRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNS 517 (1159)
Q Consensus 438 ~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s 517 (1159)
+...+.+. ..+.||.+.|+++++++.|..... .++ ...+
T Consensus 281 l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~~~~~~----------------------~~~-~~~~---- 319 (556)
T TIGR01525 281 LALAAALE--------------QSSSHPLARAIVRYAKKRGLELPK----------------------QED-VEEV---- 319 (556)
T ss_pred HHHHHHHh--------------ccCCChHHHHHHHHHHhcCCCccc----------------------ccC-eeEe----
Confidence 22222111 123699999999999987653210 000 0000
Q ss_pred CCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHH
Q 001087 518 TRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAK 597 (1159)
Q Consensus 518 ~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~ 597 (1159)
..++.+..+ +|. .-+..|+++.+ + .. ... .+...+.+++++.+|+|++.+|.
T Consensus 320 ~~~gi~~~~---~g~-~~~~lg~~~~~-~-~~--~~~-~~~~~~~~~~~~~~g~~~~~v~~------------------- 371 (556)
T TIGR01525 320 PGKGVEATV---DGQ-EEVRIGNPRLL-E-LA--AEP-ISASPDLLNEGESQGKTVVFVAV------------------- 371 (556)
T ss_pred cCCeEEEEE---CCe-eEEEEecHHHH-h-hc--CCC-chhhHHHHHHHhhCCcEEEEEEE-------------------
Confidence 112233222 231 12334776655 1 11 111 12234567788999999999984
Q ss_pred hhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcC-CeEEEEeCCcHhHHHHHHHHcCccccCceEE
Q 001087 598 SSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAG-IKIWVLTGDKMETAINIAYACNLINNEMKQF 676 (1159)
Q Consensus 598 ~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aG-IkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i 676 (1159)
|.+++|.+.++|+++||++++|+.|+++| ++++|+|||+..+|..+++++|+-.
T Consensus 372 -------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~------ 426 (556)
T TIGR01525 372 -------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE------ 426 (556)
T ss_pred -------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe------
Confidence 66899999999999999999999999999 9999999999999999999999821
Q ss_pred EEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcC
Q 001087 677 IITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNC 756 (1159)
Q Consensus 677 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~ 756 (1159)
T Consensus 427 -------------------------------------------------------------------------------- 426 (556)
T TIGR01525 427 -------------------------------------------------------------------------------- 426 (556)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeeccccccchh-hhh
Q 001087 757 SSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRFLTDL-LLV 834 (1159)
Q Consensus 757 ~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f~~l~~l-ll~ 834 (1159)
+|+++.|++|..+++.+ +..++.|+|+|||.||++|+++|||||++. +.+. ++.+||+++.+.++.... ++.
T Consensus 427 ---~f~~~~p~~K~~~v~~l-~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~--~~~~Ad~vi~~~~~~~l~~~i~ 500 (556)
T TIGR01525 427 ---VHAELLPEDKLAIVKEL-QEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDV--AIEAADIVLLNDDLSSLPTAID 500 (556)
T ss_pred ---eeccCCHHHHHHHHHHH-HHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHHHH
Confidence 78889999999999999 557789999999999999999999999874 4444 778999999988877766 799
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 835 HGRWSYLRICKVVLYFFYKNLTFTLTQF 862 (1159)
Q Consensus 835 ~Gr~~~~ri~~~i~~~~~kni~~~~~~~ 862 (1159)
.||..++++++++.|.+.+|++.+...+
T Consensus 501 ~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 501 LSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998865554
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=3.6e-58 Score=559.81 Aligned_cols=476 Identities=20% Similarity=0.230 Sum_probs=375.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhHh------hccceEEEeeC-CeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCe
Q 001087 46 VLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQG-QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 118 (1159)
Q Consensus 46 vl~vs~ik~~~ed~~r~~~d~~------~n~~~~~V~r~-g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~ 118 (1159)
++++..+.+.+|++.++|+.+. +.+.+++|+|+ |++++|+.++|+|||+|.|++||.||||++++++ .
T Consensus 60 i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g-----~ 134 (562)
T TIGR01511 60 LITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEG-----E 134 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEEC-----c
Confidence 3333444577788766665443 34578899885 6779999999999999999999999999999985 4
Q ss_pred EEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCC
Q 001087 119 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 198 (1159)
Q Consensus 119 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 198 (1159)
+.||||.||||+.|+.|++++. +|+||++.+|.
T Consensus 135 ~~vdes~lTGEs~pv~k~~gd~---------------------------V~aGt~~~~g~-------------------- 167 (562)
T TIGR01511 135 SEVDESLVTGESLPVPKKVGDP---------------------------VIAGTVNGTGS-------------------- 167 (562)
T ss_pred eEEehHhhcCCCCcEEcCCCCE---------------------------EEeeeEECCce--------------------
Confidence 5699999999999999998773 49999999998
Q ss_pred cEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccC
Q 001087 199 YIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVED 275 (1159)
Q Consensus 199 ~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~ 275 (1159)
+++.|+.||.+|.+ .+....++.+++++++.++++..++.+++++++++.++.|.
T Consensus 168 -~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~--------------------- 225 (562)
T TIGR01511 168 -LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL--------------------- 225 (562)
T ss_pred -EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 99999999999955 44445667778999999999999999988888877655432
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEE
Q 001087 276 DQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIF 355 (1159)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~ 355 (1159)
..+.+++.+++..|||+|+++++++.... ..++ .++++++|+.+.+|.|+++|+||
T Consensus 226 -------------~~~~~~~svlvvacPcaL~la~p~a~~~~-~~~a----------a~~gIlik~~~~lE~l~~v~~i~ 281 (562)
T TIGR01511 226 -------------FALEFAVTVLIIACPCALGLATPTVIAVA-TGLA----------AKNGVLIKDGDALERAANIDTVV 281 (562)
T ss_pred -------------HHHHHHHHHHHHhccchhhhHHHHHHHHH-HHHH----------HHCCeEEcChHHHHHhhCCCEEE
Confidence 16777899999999999999999999998 7777 78999999999999999999999
Q ss_pred ecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHH
Q 001087 356 SDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACK 435 (1159)
Q Consensus 356 sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1159)
||||||||+|+|++.++...+.. . ..
T Consensus 282 fDKTGTLT~g~~~v~~i~~~~~~---------------------------------------------------~---~~ 307 (562)
T TIGR01511 282 FDKTGTLTQGKPTVTDVHVFGDR---------------------------------------------------D---RT 307 (562)
T ss_pred ECCCCCCcCCCEEEEEEecCCCC---------------------------------------------------C---HH
Confidence 99999999999999987432110 0 01
Q ss_pred HHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecC
Q 001087 436 EFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEF 515 (1159)
Q Consensus 436 ~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F 515 (1159)
+++..++. +. ..+.||.+.|+++++++.|..... + ..++ ..
T Consensus 308 ~~l~~aa~---~e-----------~~s~HPia~Ai~~~~~~~~~~~~~-------~-------------~~~~---~~-- 348 (562)
T TIGR01511 308 ELLALAAA---LE-----------AGSEHPLAKAIVSYAKEKGITLVE-------V-------------SDFK---AI-- 348 (562)
T ss_pred HHHHHHHH---Hh-----------ccCCChHHHHHHHHHHhcCCCcCC-------C-------------CCeE---EE--
Confidence 23322221 11 124699999999999887653210 0 0011 01
Q ss_pred CCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHH
Q 001087 516 NSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQ 595 (1159)
Q Consensus 516 ~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~ 595 (1159)
..+.++..+ +|+ -+..|+++.+.+. +.. +.++..+|.+++.++
T Consensus 349 --~g~Gi~~~~---~g~--~~~iG~~~~~~~~----~~~--------~~~~~~~g~~~~~~~------------------ 391 (562)
T TIGR01511 349 --PGIGVEGTV---EGT--KIQLGNEKLLGEN----AIK--------IDGKAEQGSTSVLVA------------------ 391 (562)
T ss_pred --CCceEEEEE---CCE--EEEEECHHHHHhC----CCC--------CChhhhCCCEEEEEE------------------
Confidence 122333332 232 2345888876431 111 112457899988887
Q ss_pred HHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceE
Q 001087 596 AKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQ 675 (1159)
Q Consensus 596 a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~ 675 (1159)
.|.+++|.++++|++++|++++|+.|++.|++++|+|||+..+|..+++++|+-
T Consensus 392 --------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------ 445 (562)
T TIGR01511 392 --------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------ 445 (562)
T ss_pred --------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------
Confidence 477899999999999999999999999999999999999999999999999981
Q ss_pred EEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhc
Q 001087 676 FIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLN 755 (1159)
Q Consensus 676 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~ 755 (1159)
T Consensus 446 -------------------------------------------------------------------------------- 445 (562)
T TIGR01511 446 -------------------------------------------------------------------------------- 445 (562)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hh
Q 001087 756 CSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LL 833 (1159)
Q Consensus 756 ~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll 833 (1159)
+++++.|++|.++++.+ +..++.|+|||||.||++|+++|||||++ .|.+. +..+||+++.+.+.-... ++
T Consensus 446 ----~~~~~~p~~K~~~v~~l-~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~--a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 446 ----VRAEVLPDDKAALIKEL-QEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDV--AIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred ----EEccCChHHHHHHHHHH-HHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH--HHhhCCEEEeCCCHHHHHHHH
Confidence 55677899999999999 56788999999999999999999999988 45555 788999999876665544 69
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 834 VHGRWSYLRICKVVLYFFYKNLTFTLTQF 862 (1159)
Q Consensus 834 ~~Gr~~~~ri~~~i~~~~~kni~~~~~~~ 862 (1159)
..||..++++++++.|.+.+|++.+...+
T Consensus 519 ~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 519 DLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998765544
No 31
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=4e-57 Score=549.03 Aligned_cols=464 Identities=19% Similarity=0.225 Sum_probs=367.9
Q ss_pred HHHHHHHHhhhhH------hhccceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCC
Q 001087 54 EAWEDWKRFQNDM------TINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLD 127 (1159)
Q Consensus 54 ~~~ed~~r~~~d~------~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~Lt 127 (1159)
..++.+.++|+.+ .+++.+++|+|+|+++++++++|+|||+|.|++||.+|||++++++ .+.||||+||
T Consensus 32 ~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g-----~~~vdes~lT 106 (536)
T TIGR01512 32 ETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSG-----TSTVDESALT 106 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEeC-----cEEEEecccC
Confidence 4455555554433 3467899999999999999999999999999999999999999985 4569999999
Q ss_pred CCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEe
Q 001087 128 GETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFA 207 (1159)
Q Consensus 128 GEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~t 207 (1159)
|||.|+.|.+++ ..|+||.+.+|. ++++|+.|
T Consensus 107 GEs~pv~k~~g~---------------------------~v~aGt~v~~G~---------------------~~~~V~~~ 138 (536)
T TIGR01512 107 GESVPVEKAPGD---------------------------EVFAGAINLDGV---------------------LTIVVTKL 138 (536)
T ss_pred CCCCcEEeCCCC---------------------------EEEeeeEECCce---------------------EEEEEEEe
Confidence 999999998865 359999999888 99999999
Q ss_pred ccchhhhh---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhh
Q 001087 208 GHETKVMM---NSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRF 284 (1159)
Q Consensus 208 G~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~ 284 (1159)
|.+|.+.+ .....+.+++++++.++++..++.++.++++++.++.+.+... |
T Consensus 139 g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------------------- 193 (536)
T TIGR01512 139 PADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR---W---------------------- 193 (536)
T ss_pred ccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---c----------------------
Confidence 99996643 3445566789999999999999999888888776655432211 0
Q ss_pred HHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCC
Q 001087 285 LVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTR 364 (1159)
Q Consensus 285 ~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~ 364 (1159)
...+.+++.+++..|||+|+++++++...+ ..++ .++++++|+++.+|.||+++++|||||||||+
T Consensus 194 ---~~~~~~~~svlv~~~P~aL~la~~~~~~~~-~~~~----------~k~gilik~~~~le~l~~v~~i~fDKTGTLT~ 259 (536)
T TIGR01512 194 ---PFWVYRALVLLVVASPCALVISAPAAYLSA-ISAA----------ARHGILIKGGAALEALAKIKTVAFDKTGTLTT 259 (536)
T ss_pred ---HHHHHHHHHHHhhcCccccccchHHHHHHH-HHHH----------HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcC
Confidence 116777889999999999999999999988 8777 78999999999999999999999999999999
Q ss_pred CceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcc
Q 001087 365 NLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAIC 444 (1159)
Q Consensus 365 n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalC 444 (1159)
|+|++.++.. .+++...+.+
T Consensus 260 ~~~~v~~~~~------------------------------------------------------------~~~l~~a~~~ 279 (536)
T TIGR01512 260 GRPKVVDVVP------------------------------------------------------------AEVLRLAAAA 279 (536)
T ss_pred CceEEEEeeH------------------------------------------------------------HHHHHHHHHH
Confidence 9999987631 0122222211
Q ss_pred cceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEE
Q 001087 445 HTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSV 524 (1159)
Q Consensus 445 h~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv 524 (1159)
+ ..+.||.+.|+++++++.+ .+ +. . ..+| .+.+..
T Consensus 280 -----e---------~~~~hp~~~Ai~~~~~~~~-~~-----~~------------------~---~~~~----g~gi~~ 314 (536)
T TIGR01512 280 -----E---------QASSHPLARAIVDYARKRE-NV-----ES------------------V---EEVP----GEGVRA 314 (536)
T ss_pred -----h---------ccCCCcHHHHHHHHHHhcC-CC-----cc------------------e---EEec----CCeEEE
Confidence 1 1246999999999998754 10 00 0 0111 122222
Q ss_pred EEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHH
Q 001087 525 VCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDRE 604 (1159)
Q Consensus 525 iv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~ 604 (1159)
.+ +|.. +..|+++.+.+. + ...+..+|.+++.++
T Consensus 315 ~~---~g~~--~~ig~~~~~~~~----~----------~~~~~~~~~~~~~v~--------------------------- 348 (536)
T TIGR01512 315 VV---DGGE--VRIGNPRSLEAA----V----------GARPESAGKTIVHVA--------------------------- 348 (536)
T ss_pred EE---CCeE--EEEcCHHHHhhc----C----------CcchhhCCCeEEEEE---------------------------
Confidence 22 3332 234887654321 1 014566788877765
Q ss_pred HHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCC-eEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCc
Q 001087 605 QKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGI-KIWVLTGDKMETAINIAYACNLINNEMKQFIITSETN 683 (1159)
Q Consensus 605 ~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGI-kvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~ 683 (1159)
+|..++|.+.++|++++|++++|+.|+++|+ +++|+|||+..+|..+++++|+..
T Consensus 349 -----------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~------------- 404 (536)
T TIGR01512 349 -----------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE------------- 404 (536)
T ss_pred -----------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-------------
Confidence 4778999999999999999999999999999 999999999999999999999821
Q ss_pred ccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEe
Q 001087 684 AIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR 763 (1159)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R 763 (1159)
++++
T Consensus 405 ----------------------------------------------------------------------------~f~~ 408 (536)
T TIGR01512 405 ----------------------------------------------------------------------------VHAE 408 (536)
T ss_pred ----------------------------------------------------------------------------hhhc
Confidence 6778
Q ss_pred cChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeec--Cccchhhhhccceeeccccccchh-hhhhhhhHH
Q 001087 764 VSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS--GQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSY 840 (1159)
Q Consensus 764 ~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgis--g~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~ 840 (1159)
+.|++|..+++.+ +..++.|+|+|||.||++|+++|||||++. |++. +..+||+++.+.++.... ++..||..+
T Consensus 409 ~~p~~K~~~i~~l-~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~--~~~~ad~vl~~~~l~~l~~~i~~~r~~~ 485 (536)
T TIGR01512 409 LLPEDKLEIVKEL-REKYGPVAMVGDGINDAPALAAADVGIAMGASGSDV--AIETADVVLLNDDLSRLPQAIRLARRTR 485 (536)
T ss_pred cCcHHHHHHHHHH-HhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHH--HHHhCCEEEECCCHHHHHHHHHHHHHHH
Confidence 8899999999999 677899999999999999999999999884 4444 788999999776666555 699999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 001087 841 LRICKVVLYFFYKNLTFTLTQFW 863 (1159)
Q Consensus 841 ~ri~~~i~~~~~kni~~~~~~~~ 863 (1159)
+++++++.|.+.+|++.+...++
T Consensus 486 ~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 486 RIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887666553
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=4e-56 Score=567.39 Aligned_cols=490 Identities=18% Similarity=0.203 Sum_probs=390.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHh------hccceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCe
Q 001087 45 LVLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 118 (1159)
Q Consensus 45 ~vl~vs~ik~~~ed~~r~~~d~~------~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~ 118 (1159)
+++++..+.+++|++.+.|+.+. +.+.+++|+|+|++++|+.++|+|||+|.|++||.||||++++++ .
T Consensus 291 ~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g-----~ 365 (834)
T PRK10671 291 MIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG-----E 365 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc-----e
Confidence 34444455688888888776543 346789999999999999999999999999999999999999984 4
Q ss_pred EEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCC
Q 001087 119 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 198 (1159)
Q Consensus 119 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 198 (1159)
++||||.|||||.|+.|++++. +|+||++.+|.
T Consensus 366 ~~vdeS~lTGEs~pv~k~~gd~---------------------------V~aGt~~~~G~-------------------- 398 (834)
T PRK10671 366 AWLDEAMLTGEPIPQQKGEGDS---------------------------VHAGTVVQDGS-------------------- 398 (834)
T ss_pred EEEeehhhcCCCCCEecCCCCE---------------------------EEecceeccee--------------------
Confidence 6799999999999999999874 49999999998
Q ss_pred cEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccC
Q 001087 199 YIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVED 275 (1159)
Q Consensus 199 ~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~ 275 (1159)
+.+.|+.+|.+|.+ .+...+++..++++++.++++..++.+++++++++.+++|.+....
T Consensus 399 -~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~---------------- 461 (834)
T PRK10671 399 -VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPA---------------- 461 (834)
T ss_pred -EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc----------------
Confidence 99999999999955 4444556667899999999999999999998888877665432110
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEE
Q 001087 276 DQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIF 355 (1159)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~ 355 (1159)
......+..++.+++..|||+|+++++++...+ ..++ +++++++|+.+.+|.||++|++|
T Consensus 462 ---------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~-~~~~----------a~~gilvk~~~~le~l~~v~~v~ 521 (834)
T PRK10671 462 ---------PQIVYTLVIATTVLIIACPCALGLATPMSIISG-VGRA----------AEFGVLVRDADALQRASTLDTLV 521 (834)
T ss_pred ---------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHH-HHHH----------HHCCeEEecHHHHHhhcCCCEEE
Confidence 012236777899999999999999999999998 7777 78999999999999999999999
Q ss_pred ecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHH
Q 001087 356 SDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACK 435 (1159)
Q Consensus 356 sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1159)
||||||||+|+|++.++...+.. + ..
T Consensus 522 fDKTGTLT~g~~~v~~~~~~~~~-----~-------------------------------------------------~~ 547 (834)
T PRK10671 522 FDKTGTLTEGKPQVVAVKTFNGV-----D-------------------------------------------------EA 547 (834)
T ss_pred EcCCCccccCceEEEEEEccCCC-----C-------------------------------------------------HH
Confidence 99999999999999876432100 0 01
Q ss_pred HHHH-HHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeec
Q 001087 436 EFFR-CLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLE 514 (1159)
Q Consensus 436 ~~~~-~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~ 514 (1159)
+++. +.+++. .+.||.+.|++++++..+.. ... +
T Consensus 548 ~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~----------------------~~~--------~ 582 (834)
T PRK10671 548 QALRLAAALEQ---------------GSSHPLARAILDKAGDMTLP----------------------QVN--------G 582 (834)
T ss_pred HHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC----------------------Ccc--------c
Confidence 2222 222221 24799999999988643210 001 1
Q ss_pred CCCCC-ceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHH
Q 001087 515 FNSTR-KRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKF 593 (1159)
Q Consensus 515 F~s~r-krmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~ 593 (1159)
|.... +.+... . +|+ .+.+|+++.+.+... ..+.+.+.+++++.+|.+++++|+
T Consensus 583 ~~~~~g~Gv~~~--~-~g~--~~~~G~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~v~va~--------------- 637 (834)
T PRK10671 583 FRTLRGLGVSGE--A-EGH--ALLLGNQALLNEQQV-----DTKALEAEITAQASQGATPVLLAV--------------- 637 (834)
T ss_pred ceEecceEEEEE--E-CCE--EEEEeCHHHHHHcCC-----ChHHHHHHHHHHHhCCCeEEEEEE---------------
Confidence 11111 122222 1 343 345699987754211 123456667788999999999985
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCc
Q 001087 594 IQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEM 673 (1159)
Q Consensus 594 ~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~ 673 (1159)
|..++|+++++|++|+|++++|+.|++.|++++|+|||+.++|..+++++|+..
T Consensus 638 -----------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~--- 691 (834)
T PRK10671 638 -----------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE--- 691 (834)
T ss_pred -----------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE---
Confidence 457999999999999999999999999999999999999999999999999831
Q ss_pred eEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHh
Q 001087 674 KQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLS 753 (1159)
Q Consensus 674 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~ 753 (1159)
T Consensus 692 -------------------------------------------------------------------------------- 691 (834)
T PRK10671 692 -------------------------------------------------------------------------------- 691 (834)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-
Q 001087 754 LNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL- 831 (1159)
Q Consensus 754 ~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l- 831 (1159)
+++++.|++|.++++.+ +..++.|+|+|||.||++|+++|||||++ .|++. |+++||+++.+.++....
T Consensus 692 ------~~~~~~p~~K~~~i~~l-~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~--a~~~ad~vl~~~~~~~i~~ 762 (834)
T PRK10671 692 ------VIAGVLPDGKAEAIKRL-QSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDV--AIETAAITLMRHSLMGVAD 762 (834)
T ss_pred ------EEeCCCHHHHHHHHHHH-hhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHH--HHHhCCEEEecCCHHHHHH
Confidence 77889999999999999 56788999999999999999999999988 55565 889999999998887766
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 832 LLVHGRWSYLRICKVVLYFFYKNLTFTLTQF 862 (1159)
Q Consensus 832 ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~ 862 (1159)
++..||..++++++++.|.|.+|++.+...+
T Consensus 763 ~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 763 ALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999988765543
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-49 Score=436.53 Aligned_cols=516 Identities=17% Similarity=0.218 Sum_probs=379.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHhhc----cceEEEeeC-CeEEEeeccCcccceEEEEccCCccCceEEEEeecCC
Q 001087 41 VPLSLVLLVSLIKEAWEDWKRFQNDMTIN----STPVEVLQG-QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNA 115 (1159)
Q Consensus 41 ~pl~~vl~vs~ik~~~ed~~r~~~d~~~n----~~~~~V~r~-g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~ 115 (1159)
+.|+|.+++..+-|++.+-|-+.+-..+. ...++++++ |+++.++..+|+.||||.|+.||.||+|+-+++
T Consensus 70 ~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe---- 145 (681)
T COG2216 70 IILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE---- 145 (681)
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe----
Confidence 44555666666667777655443322221 234566665 899999999999999999999999999999997
Q ss_pred CCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceee
Q 001087 116 DGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLR 195 (1159)
Q Consensus 116 ~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~ 195 (1159)
|.++||||++||||.|+.|.++...+. +-- |+.+.
T Consensus 146 -G~asVdESAITGESaPViresGgD~ss------------------------VtG--------------------gT~v~ 180 (681)
T COG2216 146 -GVASVDESAITGESAPVIRESGGDFSS------------------------VTG--------------------GTRVL 180 (681)
T ss_pred -eeeecchhhccCCCcceeeccCCCccc------------------------ccC--------------------CcEEe
Confidence 666799999999999999998754311 011 33333
Q ss_pred cCCcEEEEEEEeccch---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCC
Q 001087 196 NTEYIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNS 272 (1159)
Q Consensus 196 nt~~i~gvVv~tG~~T---k~~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~ 272 (1159)
++|+...++..-.+| |+....+.+..++||-|--++.+..-+.++.++. +++...+..| ....
T Consensus 181 -SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~-~~Tl~p~a~y-------~~g~----- 246 (681)
T COG2216 181 -SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLA-VATLYPFAIY-------SGGG----- 246 (681)
T ss_pred -eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHH-HHhhhhHHHH-------cCCC-----
Confidence 688999999888888 5566667888889998888877665554332221 1111111111 1000
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCce
Q 001087 273 VEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVE 352 (1159)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~ 352 (1159)
-..+...+.|++.+||-...-.+...-..+ +-++ .+.++++++...+|..|.||
T Consensus 247 ---------------~~~i~~LiALlV~LIPTTIGgLLsAIGIAG-MdRv----------~~~NViA~SGRAVEaaGDvd 300 (681)
T COG2216 247 ---------------AASVTVLVALLVCLIPTTIGGLLSAIGIAG-MDRV----------TQFNVIATSGRAVEAAGDVD 300 (681)
T ss_pred ---------------CcCHHHHHHHHHHHhcccHHHHHHHhhhhh-hhHh----------hhhceeecCcchhhhcCCcc
Confidence 014556678899999988877776666666 5555 67899999999999999999
Q ss_pred EEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChh
Q 001087 353 YIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPD 432 (1159)
Q Consensus 353 ~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (1159)
++..|||||+|-|.=.-.++...+. .
T Consensus 301 tliLDKTGTIT~GnR~A~~f~p~~g------------------------------------------------------v 326 (681)
T COG2216 301 TLLLDKTGTITLGNRQASEFIPVPG------------------------------------------------------V 326 (681)
T ss_pred EEEecccCceeecchhhhheecCCC------------------------------------------------------C
Confidence 9999999999987543333221110 1
Q ss_pred hHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEe
Q 001087 433 ACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNV 512 (1159)
Q Consensus 433 ~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~ 512 (1159)
..+++..+..+++-. -+.|....+|+.|++.|+....+. .. .....
T Consensus 327 ~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~------------------~~--~~~~f 372 (681)
T COG2216 327 SEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDD------------------LQ--SHAEF 372 (681)
T ss_pred CHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCccc------------------cc--cccee
Confidence 123444444443222 145778889999999986542111 00 02345
Q ss_pred ecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHH
Q 001087 513 LEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEK 592 (1159)
Q Consensus 513 ~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~ 592 (1159)
.||+.+.|..++-. +++ .-+-|||.+.|.+.....+...++.++...++-++.|-..|+++.
T Consensus 373 vpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~-------------- 434 (681)
T COG2216 373 VPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVE-------------- 434 (681)
T ss_pred eecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEE--------------
Confidence 79988776666544 344 456799999999998876666888999999999999999999983
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccC
Q 001087 593 FIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE 672 (1159)
Q Consensus 593 ~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~ 672 (1159)
|-.++|++.++|-+++|.+|-+++||+.|||.+|+||||+.||..||.+.|+.+
T Consensus 435 ------------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd-- 488 (681)
T COG2216 435 ------------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-- 488 (681)
T ss_pred ------------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh--
Confidence 678999999999999999999999999999999999999999999999999831
Q ss_pred ceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHH
Q 001087 673 MKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNL 752 (1159)
Q Consensus 673 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l 752 (1159)
T Consensus 489 -------------------------------------------------------------------------------- 488 (681)
T COG2216 489 -------------------------------------------------------------------------------- 488 (681)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh
Q 001087 753 SLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 753 ~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l 831 (1159)
..+.++|++|..+++.- |..|+.|+|+|||.||+|||.+||||++| +|+.. |++|++++=.|-+.-+.+
T Consensus 489 -------fiAeatPEdK~~~I~~e-Q~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqA--AkEAaNMVDLDS~PTKli 558 (681)
T COG2216 489 -------FIAEATPEDKLALIRQE-QAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSNPTKLI 558 (681)
T ss_pred -------hhhcCChHHHHHHHHHH-HhcCcEEEEcCCCCCcchhhhhcchhhhhccccHH--HHHhhcccccCCCcccee
Confidence 55788999999999999 78999999999999999999999999999 88877 999999998887776655
Q ss_pred -hhhhhhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHh
Q 001087 832 -LLVHGRWSYLRICKVVLYFFYKNLTFT---LTQFWFTFQ 867 (1159)
Q Consensus 832 -ll~~Gr~~~~ri~~~i~~~~~kni~~~---~~~~~~~~~ 867 (1159)
++.-|+...-.=-.+..|++..-++-+ ++.+++.++
T Consensus 559 evV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~ 598 (681)
T COG2216 559 EVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAY 598 (681)
T ss_pred hHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhc
Confidence 566777765554555556655544433 344444444
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.97 E-value=5.5e-30 Score=279.97 Aligned_cols=222 Identities=26% Similarity=0.421 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHhhcc---ce-EEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCe
Q 001087 43 LSLVLLVSLIKEAWEDWKRFQNDMTINS---TP-VEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 118 (1159)
Q Consensus 43 l~~vl~vs~ik~~~ed~~r~~~d~~~n~---~~-~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~ 118 (1159)
++++++++.+.+.++++++++..+++++ .+ ++|+|+|++++++|+||+|||||+|++||.+|||+++|+ +|.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g~ 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SGS 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SSE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee----ccc
Confidence 5677778888899999999999887653 34 899999999999999999999999999999999999997 478
Q ss_pred EEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCC
Q 001087 119 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 198 (1159)
Q Consensus 119 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 198 (1159)
|+||||+||||+.|+.|.+. +++.+|++++||.++ +|
T Consensus 78 ~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~-~g 114 (230)
T PF00122_consen 78 AYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV-SG 114 (230)
T ss_dssp EEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-EE
T ss_pred cccccccccccccccccccc------------------------------------------cccccchhhcccccc-cc
Confidence 99999999999999999863 567889999999999 88
Q ss_pred cEEEEEEEeccchhhhhcc---CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccC
Q 001087 199 YIIGAVIFAGHETKVMMNS---MNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVED 275 (1159)
Q Consensus 199 ~i~gvVv~tG~~Tk~~~n~---~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~ 275 (1159)
|++|+|++||.+|++.++. ..++.+++++++.++++..++.++.+++++++.+++.++.....|
T Consensus 115 ~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 181 (230)
T PF00122_consen 115 WGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDSGISF------------- 181 (230)
T ss_dssp EEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTTCHC-------------
T ss_pred ccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceeccccccc-------------
Confidence 9999999999999764443 356667899999999999999988888888776554432111122
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCccccc
Q 001087 276 DQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEE 347 (1159)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~ 347 (1159)
...+..++.+++.++|++|+++++++..++ +.++ .++++++|+++.+|+
T Consensus 182 ------------~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~-~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 182 ------------FKSFLFAISLLIVLIPCALPLALPLSLAIA-ARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp ------------CHHHHHHHHHHHHHS-TTHHHHHHHHHHHH-HHHH----------HHTTEEESSTTHHHH
T ss_pred ------------ccccccccceeeeecccceeehHHHHHHHH-HHHH----------HHCCEEEeCcccccC
Confidence 127788899999999999999999999999 8888 789999999999884
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.87 E-value=9.3e-22 Score=212.47 Aligned_cols=97 Identities=32% Similarity=0.490 Sum_probs=90.4
Q ss_pred CcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHH
Q 001087 617 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 696 (1159)
Q Consensus 617 dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 696 (1159)
++.++|.+.+.|++++|++++|+.|+++||+++|+|||+..+|.++|+.+||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 789999999999999999999999999999999999999999999999999931
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEec--ChhhH--HHH
Q 001087 697 IARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRV--SPLQK--AQV 772 (1159)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~--sP~qK--~~i 772 (1159)
..|++++ +|++| .++
T Consensus 169 -------------------------------------------------------------~~v~a~~~~kP~~k~~~~~ 187 (215)
T PF00702_consen 169 -------------------------------------------------------------SIVFARVIGKPEPKIFLRI 187 (215)
T ss_dssp -------------------------------------------------------------EEEEESHETTTHHHHHHHH
T ss_pred -------------------------------------------------------------ccccccccccccchhHHHH
Confidence 3499999 99999 999
Q ss_pred HHHHHhccCcEEEEecCCccCHHHHHhcc
Q 001087 773 TSLVKKGARKITLSIGDGANDVSMIQAAH 801 (1159)
Q Consensus 773 V~~lk~~~g~~vl~iGDG~NDv~mL~~Ad 801 (1159)
++.+ +..+..|+|||||.||++|+++||
T Consensus 188 i~~l-~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 188 IKEL-QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHH-TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred HHHH-hcCCCEEEEEccCHHHHHHHHhCc
Confidence 9999 555569999999999999999997
No 36
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.50 E-value=2.3e-14 Score=131.35 Aligned_cols=90 Identities=37% Similarity=0.523 Sum_probs=71.1
Q ss_pred hcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCce
Q 001087 442 AICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKR 521 (1159)
Q Consensus 442 alCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkr 521 (1159)
++||++....+++.+... ..|+|+|.||+.+|.++|..+.. ...+..|++++.+||||+|||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~-----------------~~~~~~~~~~~~~pF~S~rK~ 62 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI-----------------KEIRSKYKIVAEIPFDSERKR 62 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH-----------------HHHHhhcceeEEEccCcccce
Confidence 689999886655333322 46899999999999999764321 013578999999999999999
Q ss_pred EEEEEEcCCCcEEEEEecchhHHHHHhhc
Q 001087 522 QSVVCRYADGRLVLYCKGADSVIYERLAN 550 (1159)
Q Consensus 522 msviv~~~~g~~~l~~KGA~~~i~~~~~~ 550 (1159)
|+||++ .++.+++|+|||||.|+++|+.
T Consensus 63 msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 63 MSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred eEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 999999 3456888999999999999974
No 37
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.44 E-value=4.2e-13 Score=124.45 Aligned_cols=122 Identities=21% Similarity=0.345 Sum_probs=105.1
Q ss_pred cEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHH
Q 001087 618 LTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEI 697 (1159)
Q Consensus 618 l~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 697 (1159)
+...+.++---+|=++|+++|+.|++. ++|.+-|||..-+-...|.-.|+-.+
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 456788888899999999999999999 99999999999999999998886321
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHH
Q 001087 698 ARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVK 777 (1159)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk 777 (1159)
-+++-.-|+.|+.+++.|
T Consensus 72 -------------------------------------------------------------rv~a~a~~e~K~~ii~eL- 89 (152)
T COG4087 72 -------------------------------------------------------------RVFAGADPEMKAKIIREL- 89 (152)
T ss_pred -------------------------------------------------------------eeecccCHHHHHHHHHHh-
Confidence 188888999999999999
Q ss_pred hccCcEEEEecCCccCHHHHHhcccceeecCccchh--hhhccceeecccccc
Q 001087 778 KGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQ--AVMASDFAIAQFRFL 828 (1159)
Q Consensus 778 ~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~q--A~~asD~~i~~f~~l 828 (1159)
++.++.|.|+|||+||.+||++||+||..-+.|+.. +..+||+++-+-+-.
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ 142 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEI 142 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHH
Confidence 568899999999999999999999999776666643 457999998775443
No 38
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.09 E-value=5.2e-10 Score=117.65 Aligned_cols=170 Identities=15% Similarity=0.136 Sum_probs=122.2
Q ss_pred chhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hccCC
Q 001087 875 FYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSAT 953 (1159)
Q Consensus 875 ~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~~~ 953 (1159)
++++.|++|.|++.+.+|++++|.+++ ++++|.|+|+ .++.++++++.+...+..|++++++.++.++ .....
T Consensus 3 Pl~~~qiL~inli~d~~~a~al~~e~~--~~~im~r~Pr----~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~ 76 (182)
T PF00689_consen 3 PLTPIQILWINLITDLLPALALGFEPP--DPDIMKRPPR----DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIF 76 (182)
T ss_dssp SS-HHHHHHHHHTTTHHHHHHGGGSS---STTGGGS-------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHST
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhcCcc--hhhhhhcccc----ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 478899999999999999999998665 7899999998 7888999999988889999999998887776 32211
Q ss_pred ccCCCCcccccccchhHHHHHHHHHHHHHHHHhhcc-----c---hhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCce
Q 001087 954 GQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNT-----I---TRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENV 1025 (1159)
Q Consensus 954 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~-----~---~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1159)
+....+...+.....|++|+++++...+.. +.+++ | ....+..++.++++.++++++..++|.
T Consensus 77 ~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~-~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~-------- 147 (182)
T PF00689_consen 77 GWDEETNNDNLAQAQTMAFTALVLSQLFNA-FNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPG-------- 147 (182)
T ss_dssp CSSSHHHTTCHHHHHHHHHHHHHHHHHHHH-HHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTT--------
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhh-cccccccccceecccccccchHHHHHHHHHHHHHHHhcchh--------
Confidence 221111111244678999999999888874 44444 2 234567788888888887777777642
Q ss_pred eeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 1026 FFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGV 1059 (1159)
Q Consensus 1026 ~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~ 1059 (1159)
.+.++++. .++..|+.++..+++.++.++++|++
T Consensus 148 ~~~~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 148 LNRIFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred hHhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 34556666 78999999999999999999999874
No 39
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.88 E-value=2.1e-06 Score=99.27 Aligned_cols=287 Identities=15% Similarity=0.179 Sum_probs=170.0
Q ss_pred hhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCccc-chhcccC
Q 001087 614 IEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAI-RDVEERG 692 (1159)
Q Consensus 614 iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~-~~~~~~~ 692 (1159)
.-.+-.|.|++...-+.+.+....|+.|-+|.|+.+..+-.+.....-.|.+.||-......+.+..+...- .+... .
T Consensus 811 a~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~p-a 889 (1354)
T KOG4383|consen 811 AFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGP-A 889 (1354)
T ss_pred HhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCC-C
Confidence 346778999999999999999999999999999999999999999999999999988877767666543210 00000 0
Q ss_pred ChHHHH-HHHHHHHHHHHHHHHHHhhhh-ccccCCCceEE-EEcccchhHhcch----------hHHHHHHHHhhcC--C
Q 001087 693 DPVEIA-RFMREEVKRELNKCIDEAQQY-IHSISGEKLAL-IIDGKCLMYALDP----------SLRVILLNLSLNC--S 757 (1159)
Q Consensus 693 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l-vi~G~~l~~~l~~----------~~~~~~~~l~~~~--~ 757 (1159)
.++... +..+.....++.........- .+........+ -.|...-+.+-++ ..+.++.++- +. -
T Consensus 890 ~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iD-NVPLL 968 (1354)
T KOG4383|consen 890 HEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEID-NVPLL 968 (1354)
T ss_pred ChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCccccccc-Cccee
Confidence 000000 000001111100000000000 00000000000 0011100111110 0111111110 00 0
Q ss_pred ceEEEecChhhHHHHHHHHHhccCcEEEEecCCccC--HHHHHhcccceeecCccch----------------hh-----
Q 001087 758 SVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAND--VSMIQAAHIGVGISGQEGM----------------QA----- 814 (1159)
Q Consensus 758 ~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND--v~mL~~AdVGIgisg~e~~----------------qA----- 814 (1159)
.-.|-.++|+.--++++.+ |+.|.+|+.+|..+|- .-..-+|||+|++-..|.. ||
T Consensus 969 V~LFTDcnpeamcEMIeIM-QE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandgls 1047 (1354)
T KOG4383|consen 969 VGLFTDCNPEAMCEMIEIM-QENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLS 1047 (1354)
T ss_pred eeeccCCCHHHHHHHHHHH-HHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCC
Confidence 1268899999999999999 8999999999999994 3455689999976443211 11
Q ss_pred ---------hhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHH
Q 001087 815 ---------VMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLY 884 (1159)
Q Consensus 815 ---------~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~~~l~~~ 884 (1159)
+.+.|+-+.+-..++.. |++..|....-+++.++|.++....+..++|...++. -.++|+.-.++|.
T Consensus 1048 plQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~---LP~i~s~sdii~l 1124 (1354)
T KOG4383|consen 1048 PLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF---LPIIFSHSDIILL 1124 (1354)
T ss_pred ceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhccchHHHH
Confidence 12233333333334444 6889999999999999999999999999998877763 3345776677776
Q ss_pred HhhhhhhHHHhhh-ccccCCChhhh
Q 001087 885 NVIFTSMPVIMLG-LFEKDVSASLS 908 (1159)
Q Consensus 885 n~i~t~lp~~~l~-~~d~~~~~~~~ 908 (1159)
..+- +|.+.+| +|.+......+
T Consensus 1125 Scfc--~PlL~i~tL~gk~~hkSii 1147 (1354)
T KOG4383|consen 1125 SCFC--IPLLFIGTLFGKFEHKSII 1147 (1354)
T ss_pred HHHH--HHHHHHHHHhcCCCccceE
Confidence 6543 6888777 55554444433
No 40
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.64 E-value=2.6e-07 Score=98.87 Aligned_cols=113 Identities=21% Similarity=0.240 Sum_probs=87.1
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
.++.+|+.+.++.++++|.+||++||=-..-+..||+.+|+...-.+.+...+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d--------------------------- 128 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD--------------------------- 128 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC---------------------------
Confidence 78999999999999999999999999999999999999999643322222211
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCc---EE
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARK---IT 784 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~---~v 784 (1159)
. +++|. ++.-.+..+.|...++.+.+..|. -+
T Consensus 129 ---------------------G-~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~ 163 (212)
T COG0560 129 ---------------------G-KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEET 163 (212)
T ss_pred ---------------------C-EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHe
Confidence 0 22332 233334457888888666555554 59
Q ss_pred EEecCCccCHHHHHhcccceeecCccch
Q 001087 785 LSIGDGANDVSMIQAAHIGVGISGQEGM 812 (1159)
Q Consensus 785 l~iGDG~NDv~mL~~AdVGIgisg~e~~ 812 (1159)
.|+|||+||.|||+.|+.+|++......
T Consensus 164 ~a~gDs~nDlpml~~ag~~ia~n~~~~l 191 (212)
T COG0560 164 VAYGDSANDLPMLEAAGLPIAVNPKPKL 191 (212)
T ss_pred EEEcCchhhHHHHHhCCCCeEeCcCHHH
Confidence 9999999999999999999999887663
No 41
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.61 E-value=1.6e-07 Score=99.95 Aligned_cols=117 Identities=18% Similarity=0.150 Sum_probs=85.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.||+.+.|+.|++.| ++.++||-....+..++..+|+..--.+.+.+....
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57999999999999975 999999999999999999999842110001110000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEec
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 788 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iG 788 (1159)
.++|. .. ..|..|..+++.+ +..|..+.|+|
T Consensus 121 ----------------------~~tG~------------------------~~--~~~~~K~~~l~~l-~~~~~~~v~vG 151 (203)
T TIGR02137 121 ----------------------RVVGY------------------------QL--RQKDPKRQSVIAF-KSLYYRVIAAG 151 (203)
T ss_pred ----------------------eeECe------------------------ee--cCcchHHHHHHHH-HhhCCCEEEEe
Confidence 11221 11 3477899999999 56677899999
Q ss_pred CCccCHHHHHhcccceeecCccchhhhhccceee
Q 001087 789 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAI 822 (1159)
Q Consensus 789 DG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i 822 (1159)
||.||.+|++.|++||++.+++..+ ..+=|+..
T Consensus 152 Ds~nDl~ml~~Ag~~ia~~ak~~~~-~~~~~~~~ 184 (203)
T TIGR02137 152 DSYNDTTMLSEAHAGILFHAPENVI-REFPQFPA 184 (203)
T ss_pred CCHHHHHHHHhCCCCEEecCCHHHH-HhCCCCCc
Confidence 9999999999999999999988752 33444443
No 42
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.54 E-value=2.9e-07 Score=104.68 Aligned_cols=128 Identities=23% Similarity=0.258 Sum_probs=90.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.||+.++|+.|+++|+++.++||.....+..+..++|+..--.+.+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 48899999999999999999999999988888888888884211111111000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC---cEEE
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR---KITL 785 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g---~~vl 785 (1159)
.++|.... .+ +..+.|+..++.+.++.| ..|.
T Consensus 234 ----------------------~ltg~v~g--------------------~i---v~~k~K~~~L~~la~~lgi~~~qtI 268 (322)
T PRK11133 234 ----------------------KLTGNVLG--------------------DI---VDAQYKADTLTRLAQEYEIPLAQTV 268 (322)
T ss_pred ----------------------EEEeEecC--------------------cc---CCcccHHHHHHHHHHHcCCChhhEE
Confidence 01111000 01 234678888888765555 6799
Q ss_pred EecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchh
Q 001087 786 SIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~l 831 (1159)
|||||+||.+|+++|++||++...+. .+..||.++.. ..+.-+
T Consensus 269 aVGDg~NDl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~~-~~l~~~ 311 (322)
T PRK11133 269 AIGDGANDLPMIKAAGLGIAYHAKPK--VNEQAQVTIRH-ADLMGV 311 (322)
T ss_pred EEECCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEecC-cCHHHH
Confidence 99999999999999999999977766 56799999974 344433
No 43
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.45 E-value=6.6e-07 Score=97.05 Aligned_cols=128 Identities=24% Similarity=0.301 Sum_probs=90.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.+|++++++.|++.|+++.++||.....+..+....|+..--...+..+ +.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~--~~------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVE--DG------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEE--CC-------------------------
Confidence 589999999999999999999999999999999999998843100000000 00
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEe-cChhhHHHHHHHHHhccC---cEE
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR-VSPLQKAQVTSLVKKGAR---KIT 784 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R-~sP~qK~~iV~~lk~~~g---~~v 784 (1159)
+++|. +.++ +.+..|..+++.+.++.| ..+
T Consensus 138 ----------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 171 (219)
T TIGR00338 138 ----------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENT 171 (219)
T ss_pred ----------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHE
Confidence 00110 1111 123346666665534433 458
Q ss_pred EEecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchh
Q 001087 785 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 785 l~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~l 831 (1159)
++|||+.||+.|.+.|+++|++.+.+. ..++||++|.+.++...+
T Consensus 172 i~iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~~~~~~ 216 (219)
T TIGR00338 172 VAVGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKDLTDIL 216 (219)
T ss_pred EEEECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCCHHHHH
Confidence 899999999999999999999988776 668999999987765433
No 44
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.15 E-value=6.3e-06 Score=92.47 Aligned_cols=61 Identities=20% Similarity=0.314 Sum_probs=48.8
Q ss_pred EecCh--hhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeecc
Q 001087 762 CRVSP--LQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 762 ~R~sP--~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~ 824 (1159)
..++| -.|+.-++.+.+..| .-|+++|||.||.+||+.|++||+|. +.+. ++.+||++..+
T Consensus 188 ~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~--vK~~A~~vt~~ 254 (270)
T PRK10513 188 LEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPS--VKEVAQFVTKS 254 (270)
T ss_pred EEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHH--HHHhcCeeccC
Confidence 34555 389888888766655 56999999999999999999999994 4444 78899998764
No 45
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.12 E-value=1.1e-05 Score=85.29 Aligned_cols=93 Identities=20% Similarity=0.250 Sum_probs=69.4
Q ss_pred CChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHH
Q 001087 632 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNK 711 (1159)
Q Consensus 632 ~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (1159)
+++++.|+.++++|+++|++||+....+..+++.+|+.... ++.-....
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~----------------------------- 140 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFD----------------------------- 140 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEEC-----------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeee-----------------------------
Confidence 66669999999999999999999999999999999996432 11110000
Q ss_pred HHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChh-h--HHHHHHHH-----HhccCcE
Q 001087 712 CIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPL-Q--KAQVTSLV-----KKGARKI 783 (1159)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~-q--K~~iV~~l-----k~~~g~~ 783 (1159)
++ ......|++|. + |+..++.+ ++.....
T Consensus 141 ---------------------~~----------------------~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~ 177 (192)
T PF12710_consen 141 ---------------------NG----------------------GGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDR 177 (192)
T ss_dssp ---------------------TT----------------------CCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCE
T ss_pred ---------------------cc----------------------cceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCe
Confidence 00 12355666666 4 99999888 1234689
Q ss_pred EEEecCCccCHHHHH
Q 001087 784 TLSIGDGANDVSMIQ 798 (1159)
Q Consensus 784 vl~iGDG~NDv~mL~ 798 (1159)
+.++|||.||.+|||
T Consensus 178 ~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 178 VIAIGDSINDLPMLR 192 (192)
T ss_dssp EEEEESSGGGHHHHH
T ss_pred EEEEECCHHHHHHhC
Confidence 999999999999997
No 46
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.12 E-value=2.7e-05 Score=87.09 Aligned_cols=194 Identities=17% Similarity=0.160 Sum_probs=101.7
Q ss_pred eeeccc-ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHH
Q 001087 624 TAIEDK-LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMR 702 (1159)
Q Consensus 624 ~~ieD~-lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 702 (1159)
+.-.|. +.+.+.++|+.+++.|+++.+.||-....+..+..++++-. .++..++.- +....+.-....+....-
T Consensus 14 Ll~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~--i~~~~~~i~~~~l~~~~~ 88 (264)
T COG0561 14 LLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGAL--IYNGGELLFQKPLSREDV 88 (264)
T ss_pred ccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeE--EecCCcEEeeecCCHHHH
Confidence 333344 78889999999999999999999999999999999999854 233333221 111100000000111111
Q ss_pred HHHHHHHHHHHHHhhhhccc-----cCCC-----------ceEE---EEcccc-hhH-hc---chhHHHHHHHHhhcCC-
Q 001087 703 EEVKRELNKCIDEAQQYIHS-----ISGE-----------KLAL---IIDGKC-LMY-AL---DPSLRVILLNLSLNCS- 757 (1159)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~-----~~~~-----------~~~l---vi~G~~-l~~-~l---~~~~~~~~~~l~~~~~- 757 (1159)
..+................. .... .... -.+... ... .. .+.+.+....+...+.
T Consensus 89 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 168 (264)
T COG0561 89 EELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPD 168 (264)
T ss_pred HHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccc
Confidence 11111111100000000000 0000 0000 000000 000 00 0111222222222222
Q ss_pred -ceEEEecCh---------hhHHHHHHHHHhccCcE---EEEecCCccCHHHHHhcccceeecCc-cchhhhhccceeec
Q 001087 758 -SVVCCRVSP---------LQKAQVTSLVKKGARKI---TLSIGDGANDVSMIQAAHIGVGISGQ-EGMQAVMASDFAIA 823 (1159)
Q Consensus 758 -~vI~~R~sP---------~qK~~iV~~lk~~~g~~---vl~iGDG~NDv~mL~~AdVGIgisg~-e~~qA~~asD~~i~ 823 (1159)
...+++..| -.|+.-++.+.+..|-. |+++|||.||.+||+.|..||++... +. ++..||++..
T Consensus 169 ~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~--~k~~A~~vt~ 246 (264)
T COG0561 169 LGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEE--LKELADYVTT 246 (264)
T ss_pred cceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHH--HHhhCCcccC
Confidence 344444444 38999998887767754 99999999999999999999999554 44 8889996644
Q ss_pred c
Q 001087 824 Q 824 (1159)
Q Consensus 824 ~ 824 (1159)
.
T Consensus 247 ~ 247 (264)
T COG0561 247 S 247 (264)
T ss_pred C
Confidence 3
No 47
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.05 E-value=8.1e-06 Score=82.06 Aligned_cols=113 Identities=21% Similarity=0.337 Sum_probs=79.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCce--EEEEecCCcccchhcccCChHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK--QFIITSETNAIRDVEERGDPVEIARFMREEVK 706 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (1159)
.|-+|++|..+.|++.|.++.+++|-=..-+..||.++||...+.. .+..+.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~-------------------------- 141 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDK-------------------------- 141 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeecc--------------------------
Confidence 4679999999999999999999999999999999999999653321 111110
Q ss_pred HHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc-CcEEE
Q 001087 707 RELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA-RKITL 785 (1159)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~-g~~vl 785 (1159)
+|+-+..-. --.-+...-|+.+++.+++.. -+.++
T Consensus 142 --------------------------~Gk~~gfd~------------------~~ptsdsggKa~~i~~lrk~~~~~~~~ 177 (227)
T KOG1615|consen 142 --------------------------DGKYLGFDT------------------NEPTSDSGGKAEVIALLRKNYNYKTIV 177 (227)
T ss_pred --------------------------CCccccccc------------------CCccccCCccHHHHHHHHhCCChheeE
Confidence 111111000 000011347999999997543 47899
Q ss_pred EecCCccCHHHHHhcccceeecCccc
Q 001087 786 SIGDGANDVSMIQAAHIGVGISGQEG 811 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~AdVGIgisg~e~ 811 (1159)
|||||+||.+|+..||.=||..|...
T Consensus 178 mvGDGatDlea~~pa~afi~~~g~~~ 203 (227)
T KOG1615|consen 178 MVGDGATDLEAMPPADAFIGFGGNVI 203 (227)
T ss_pred EecCCccccccCCchhhhhccCCceE
Confidence 99999999999999877776655443
No 48
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.02 E-value=2.3e-05 Score=83.96 Aligned_cols=121 Identities=17% Similarity=0.188 Sum_probs=82.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.||++++++.|+++ +++.++||-....+..+...+|+..--...+....+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 3579999999999999 9999999999999999999988842100111110000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEec
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 788 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iG 788 (1159)
.+.|.. . ..|..|...++.+ +..+..++|||
T Consensus 121 ----------------------~i~~~~-----------------------~---~~p~~k~~~l~~~-~~~~~~~v~iG 151 (205)
T PRK13582 121 ----------------------MITGYD-----------------------L---RQPDGKRQAVKAL-KSLGYRVIAAG 151 (205)
T ss_pred ----------------------eEECcc-----------------------c---cccchHHHHHHHH-HHhCCeEEEEe
Confidence 001100 0 1367788888877 45678899999
Q ss_pred CCccCHHHHHhcccceeecCccchhhhhccce-eecccc
Q 001087 789 DGANDVSMIQAAHIGVGISGQEGMQAVMASDF-AIAQFR 826 (1159)
Q Consensus 789 DG~NDv~mL~~AdVGIgisg~e~~qA~~asD~-~i~~f~ 826 (1159)
||.||..|.++|++||.....+... ...++. ++.+++
T Consensus 152 Ds~~D~~~~~aa~~~v~~~~~~~~~-~~~~~~~~~~~~~ 189 (205)
T PRK13582 152 DSYNDTTMLGEADAGILFRPPANVI-AEFPQFPAVHTYD 189 (205)
T ss_pred CCHHHHHHHHhCCCCEEECCCHHHH-HhCCcccccCCHH
Confidence 9999999999999999875554422 234454 555544
No 49
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.00 E-value=2.6e-05 Score=79.44 Aligned_cols=95 Identities=15% Similarity=0.185 Sum_probs=70.4
Q ss_pred HHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHh
Q 001087 637 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 716 (1159)
Q Consensus 637 tI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1159)
+|+.|++.|+++.++||+....+..+....|+-.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------------------- 69 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------------------- 69 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------------------------
Confidence 9999999999999999999999999999888731
Q ss_pred hhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc---CcEEEEecCCccC
Q 001087 717 QQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA---RKITLSIGDGAND 793 (1159)
Q Consensus 717 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~---g~~vl~iGDG~ND 793 (1159)
.+.. ...|...++.+.++. ...++|+||+.||
T Consensus 70 -------------------------------------------~~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D 104 (154)
T TIGR01670 70 -------------------------------------------LYQG--QSNKLIAFSDILEKLALAPENVAYIGDDLID 104 (154)
T ss_pred -------------------------------------------EEec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 0000 022344343332322 3579999999999
Q ss_pred HHHHHhcccceeecCccchhhhhccceeec
Q 001087 794 VSMIQAAHIGVGISGQEGMQAVMASDFAIA 823 (1159)
Q Consensus 794 v~mL~~AdVGIgisg~e~~qA~~asD~~i~ 823 (1159)
.+|++.|.+++++..... .....||+++.
T Consensus 105 ~~~~~~ag~~~~v~~~~~-~~~~~a~~i~~ 133 (154)
T TIGR01670 105 WPVMEKVGLSVAVADAHP-LLIPRADYVTR 133 (154)
T ss_pred HHHHHHCCCeEecCCcCH-HHHHhCCEEec
Confidence 999999999999954432 25677888885
No 50
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=97.98 E-value=2.7e-05 Score=85.13 Aligned_cols=181 Identities=18% Similarity=0.164 Sum_probs=95.8
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccc--hhcccCChHHHHHHHHHHHHH
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIR--DVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
+-+.+.++|+.|++.|+++.+.||-....+..+++.+++-. ..+..++.---.. ........ + +... .+..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~--~-~~~~-~~~~ 93 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFLGD--I-EECE-KAYS 93 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEEcc--h-HHHH-HHHH
Confidence 67889999999999999999999999999999999988732 2332222110000 00000000 0 0010 1111
Q ss_pred HHHHHHHHhhhhcccc-C-CCceEEE-EcccchhHhcchhHHHHHHHHhhc---CCceEEEecChhh--HHHHHHHHHhc
Q 001087 708 ELNKCIDEAQQYIHSI-S-GEKLALI-IDGKCLMYALDPSLRVILLNLSLN---CSSVVCCRVSPLQ--KAQVTSLVKKG 779 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~-~-~~~~~lv-i~G~~l~~~l~~~~~~~~~~l~~~---~~~vI~~R~sP~q--K~~iV~~lk~~ 779 (1159)
.+.+............ . .....+. .+.... ++..+.+.+.... ..+..+..+.|.. |+.-++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~ 168 (230)
T PRK01158 94 ELKKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAEL 168 (230)
T ss_pred HHHHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHH
Confidence 1111000000000000 0 0001111 122111 1222222221100 1111234666655 88888887655
Q ss_pred cC---cEEEEecCCccCHHHHHhcccceeecC-ccchhhhhccceeecc
Q 001087 780 AR---KITLSIGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 780 ~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~asD~~i~~ 824 (1159)
.| .-++++|||.||.+|++.|++||++.+ .+. .+..||++..+
T Consensus 169 ~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~--vk~~a~~v~~~ 215 (230)
T PRK01158 169 MGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEE--LKEAADYVTEK 215 (230)
T ss_pred hCCCHHHEEEECCchhhHHHHHhcCceEEecCccHH--HHHhcceEecC
Confidence 44 569999999999999999999999944 443 67889998764
No 51
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=97.97 E-value=2.7e-05 Score=84.25 Aligned_cols=174 Identities=14% Similarity=0.165 Sum_probs=95.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCC-----cccchhcccCChHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSET-----NAIRDVEERGDPVEIARFMRE 703 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~-----~~~~~~~~~~~~~~~~~~~~~ 703 (1159)
++-+.+.++|++|+++|+++.+.||-....+..+++.+++-. ..+..++.- ..+ ......+ .........
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~-~~~~~~~-~~~~~~~~~ 92 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDI-FLANMEE-EWFLDEEKK 92 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcE-EEecccc-hhhHHHhhh
Confidence 478899999999999999999999999999999999888632 222222211 100 0000000 000000000
Q ss_pred HHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCce---EEEecC--hhhHHHHHHHHHh
Q 001087 704 EVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSV---VCCRVS--PLQKAQVTSLVKK 778 (1159)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v---I~~R~s--P~qK~~iV~~lk~ 778 (1159)
. ........ .........+..+++.... +...+.... ...+ .+-.++ .-.|+..++.+.+
T Consensus 93 ----~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~--~~~~~~~~~~ei~~~~~~K~~~i~~l~~ 157 (215)
T TIGR01487 93 ----K-RFPRDRLS---NEYPRASLVIMREGKDVDE-----VREIIKERG--LNLVDSGFAIHIMKKGVDKGVGVEKLKE 157 (215)
T ss_pred ----h-hhhhhhcc---cccceeEEEEecCCccHHH-----HHHHHHhCC--eEEEecCceEEEecCCCChHHHHHHHHH
Confidence 0 00000000 0000111222233332221 111111110 1111 122333 4589998888865
Q ss_pred ccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeecc
Q 001087 779 GAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 779 ~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~ 824 (1159)
..| ..++++||+.||.+|++.|++||++ .+.+. ++..||++...
T Consensus 158 ~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~--~k~~A~~v~~~ 205 (215)
T TIGR01487 158 LLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQ--LKEIADYVTSN 205 (215)
T ss_pred HhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHH--HHHhCCEEcCC
Confidence 554 3599999999999999999999999 44444 77889998753
No 52
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=97.90 E-value=5e-05 Score=82.67 Aligned_cols=184 Identities=15% Similarity=0.125 Sum_probs=94.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
.+.+.+.++|+.|+++||++.+.||-....+..+.+..|+.. ..+..++..-...+.....-...+.+.........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 367788899999999999999999999999999999988522 23322222100000000000000000000000000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhc---CCceEEEecCh--hhHHHHHHHHHhccC--
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLN---CSSVVCCRVSP--LQKAQVTSLVKKGAR-- 781 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~---~~~vI~~R~sP--~qK~~iV~~lk~~~g-- 781 (1159)
........... .........+.... ..+ .......++... +.+..+..+.| ..|..-++.+.+..|
T Consensus 92 ~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~ 164 (225)
T TIGR01482 92 KTFPFSRLKVQ-YPRRASLVKMRYGI-DVD-----TVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIK 164 (225)
T ss_pred cccchhhhccc-cccccceEEEeecC-CHH-----HHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCC
Confidence 00000000000 00001111122211 111 111111111111 01122445555 478888877755544
Q ss_pred -cEEEEecCCccCHHHHHhcccceeecC-ccchhhhhccceeecc
Q 001087 782 -KITLSIGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 782 -~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~asD~~i~~ 824 (1159)
..|+++||+.||.+|++.|++||+|.. .+. .+..||++...
T Consensus 165 ~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~--~k~~A~~vt~~ 207 (225)
T TIGR01482 165 PGETLVCGDSENDIDLFEVPGFGVAVANAQPE--LKEWADYVTES 207 (225)
T ss_pred HHHEEEECCCHhhHHHHHhcCceEEcCChhHH--HHHhcCeecCC
Confidence 569999999999999999999999954 443 67889998754
No 53
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=97.83 E-value=9.4e-05 Score=78.83 Aligned_cols=118 Identities=20% Similarity=0.261 Sum_probs=80.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.+|+.++++.|++.|+++.++||-....+..++...|+..--...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999988632100111100000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC---cEEE
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR---KITL 785 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g---~~vl 785 (1159)
...+ ..+-.+.|..|..+++.+.+..| ..++
T Consensus 134 ----------------------~~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i 167 (201)
T TIGR01491 134 ----------------------FIQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETV 167 (201)
T ss_pred ----------------------eEec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEE
Confidence 0000 01222446678777776644433 4699
Q ss_pred EecCCccCHHHHHhcccceeecCccchhhhhccc
Q 001087 786 SIGDGANDVSMIQAAHIGVGISGQEGMQAVMASD 819 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD 819 (1159)
+|||+.||++|+++|++++++.+.... ...|+|
T Consensus 168 ~iGDs~~D~~~a~~ag~~~a~~~~~~~-~~~a~~ 200 (201)
T TIGR01491 168 AVGDSKNDLPMFEVADISISLGDEGHA-DYLAKD 200 (201)
T ss_pred EEcCCHhHHHHHHhcCCeEEECCCccc-hhhccc
Confidence 999999999999999999998553322 445555
No 54
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.83 E-value=4.5e-05 Score=82.38 Aligned_cols=112 Identities=12% Similarity=0.162 Sum_probs=73.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
-++++|+++.++.|++.|+++.++||.....+..+....+... . +.-+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~-i~~n---------------------------- 116 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---R-IYCN---------------------------- 116 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---c-EEec----------------------------
Confidence 4799999999999999999999999999988888887664321 1 1000
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceE-EEecChhhHHHHHHHHHhccCcEEEE
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVV-CCRVSPLQKAQVTSLVKKGARKITLS 786 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI-~~R~sP~qK~~iV~~lk~~~g~~vl~ 786 (1159)
-++++|..+..... + .... |..-....|..+++.++ .....++|
T Consensus 117 ---------------------~~~~~~~~~~~~~p-~------------~~~~~~~~~cg~~K~~~l~~~~-~~~~~~i~ 161 (214)
T TIGR03333 117 ---------------------EADFSNEYIHIDWP-H------------PCDGTCQNQCGCCKPSLIRKLS-EPNDYHIV 161 (214)
T ss_pred ---------------------eeEeeCCeeEEeCC-C------------CCccccccCCCCCHHHHHHHHh-hcCCcEEE
Confidence 01112221110000 0 0000 00111458999999884 45667899
Q ss_pred ecCCccCHHHHHhcccceee
Q 001087 787 IGDGANDVSMIQAAHIGVGI 806 (1159)
Q Consensus 787 iGDG~NDv~mL~~AdVGIgi 806 (1159)
||||.||..|.+.||++++-
T Consensus 162 iGDg~~D~~~a~~Ad~~~ar 181 (214)
T TIGR03333 162 IGDSVTDVEAAKQSDLCFAR 181 (214)
T ss_pred EeCCHHHHHHHHhCCeeEeh
Confidence 99999999999999997653
No 55
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.80 E-value=5.5e-05 Score=79.44 Aligned_cols=96 Identities=16% Similarity=0.177 Sum_probs=70.5
Q ss_pred HHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHH
Q 001087 636 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDE 715 (1159)
Q Consensus 636 etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (1159)
..|+.|++.|+++.++||.....+..++++.|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 68999999999999999999999999999988731
Q ss_pred hhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC---cEEEEecCCcc
Q 001087 716 AQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR---KITLSIGDGAN 792 (1159)
Q Consensus 716 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g---~~vl~iGDG~N 792 (1159)
++. ..+.|...++.+.+..| .-|+||||+.|
T Consensus 90 --------------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~ 123 (183)
T PRK09484 90 --------------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLI 123 (183)
T ss_pred --------------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence 000 01223333333323333 56999999999
Q ss_pred CHHHHHhcccceeecCccchhhhhccceeec
Q 001087 793 DVSMIQAAHIGVGISGQEGMQAVMASDFAIA 823 (1159)
Q Consensus 793 Dv~mL~~AdVGIgisg~e~~qA~~asD~~i~ 823 (1159)
|.+|++.|.+++++...+. .+...||+++.
T Consensus 124 D~~~a~~aG~~~~v~~~~~-~~~~~a~~v~~ 153 (183)
T PRK09484 124 DWPVMEKVGLSVAVADAHP-LLLPRADYVTR 153 (183)
T ss_pred HHHHHHHCCCeEecCChhH-HHHHhCCEEec
Confidence 9999999999988743322 25667899885
No 56
>PLN02954 phosphoserine phosphatase
Probab=97.76 E-value=0.00011 Score=79.96 Aligned_cols=41 Identities=17% Similarity=0.404 Sum_probs=38.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|++++++.|++.|+++.++||.....+..+...+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999985
No 57
>PRK10976 putative hydrolase; Provisional
Probab=97.75 E-value=0.0001 Score=82.58 Aligned_cols=61 Identities=25% Similarity=0.262 Sum_probs=47.4
Q ss_pred EEecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccc--eeec
Q 001087 761 CCRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASD--FAIA 823 (1159)
Q Consensus 761 ~~R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD--~~i~ 823 (1159)
+..+.|. .|+.-++.+.+..| .-|+++|||.||.+||+.|+.||+|. +.+. ++..|| ++..
T Consensus 181 ~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~--vK~~A~~~~v~~ 249 (266)
T PRK10976 181 CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQR--LKDLLPELEVIG 249 (266)
T ss_pred eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHH--HHHhCCCCeecc
Confidence 4456665 69998888866665 56999999999999999999999994 4444 677777 5554
No 58
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=97.75 E-value=6.6e-05 Score=84.33 Aligned_cols=58 Identities=17% Similarity=0.257 Sum_probs=47.0
Q ss_pred EEecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeecC-ccchhhhhccce
Q 001087 761 CCRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDF 820 (1159)
Q Consensus 761 ~~R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~asD~ 820 (1159)
+..++|. .|+.-++.+.+..| .-|+++|||-||.+||+.|+.||+|.. .+. ++.+||+
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~--vK~~A~~ 242 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQ--LRAELPH 242 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHH--HHHhCCC
Confidence 3456666 59998888866665 579999999999999999999999944 444 7788886
No 59
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.74 E-value=8.4e-05 Score=76.52 Aligned_cols=97 Identities=15% Similarity=0.163 Sum_probs=70.8
Q ss_pred HHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHH
Q 001087 636 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDE 715 (1159)
Q Consensus 636 etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (1159)
..|+.|+++|+++-++|+.....+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 48999999999999999999999999999999841
Q ss_pred hhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecC--hhhHHHHHHHHHhccCcEEEEecCCccC
Q 001087 716 AQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVS--PLQKAQVTSLVKKGARKITLSIGDGAND 793 (1159)
Q Consensus 716 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~s--P~qK~~iV~~lk~~~g~~vl~iGDG~ND 793 (1159)
.|.... |+--..+++.+ .-...-+++|||+.||
T Consensus 76 --------------------------------------------~f~~~kpkp~~~~~~~~~l-~~~~~ev~~iGD~~nD 110 (169)
T TIGR02726 76 --------------------------------------------FHEGIKKKTEPYAQMLEEM-NISDAEVCYVGDDLVD 110 (169)
T ss_pred --------------------------------------------EEecCCCCHHHHHHHHHHc-CcCHHHEEEECCCHHH
Confidence 111111 22112222222 1223569999999999
Q ss_pred HHHHHhcccceeecCccchhhhhccceeec
Q 001087 794 VSMIQAAHIGVGISGQEGMQAVMASDFAIA 823 (1159)
Q Consensus 794 v~mL~~AdVGIgisg~e~~qA~~asD~~i~ 823 (1159)
.+|++.|++++++..... +.+..||++..
T Consensus 111 i~~~~~ag~~~am~nA~~-~lk~~A~~I~~ 139 (169)
T TIGR02726 111 LSMMKRVGLAVAVGDAVA-DVKEAAAYVTT 139 (169)
T ss_pred HHHHHHCCCeEECcCchH-HHHHhCCEEcC
Confidence 999999999999965432 26788999875
No 60
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.69 E-value=0.00012 Score=76.36 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=37.5
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
+++|+++.++.+++.|++++++||.....+..++...|+-
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999998874
No 61
>PRK08238 hypothetical protein; Validated
Probab=97.68 E-value=0.0091 Score=71.88 Aligned_cols=41 Identities=22% Similarity=0.175 Sum_probs=38.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.+.++.++++|++++++|+=....+..++...|+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF 112 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF 112 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999999999983
No 62
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=97.67 E-value=0.00011 Score=80.81 Aligned_cols=57 Identities=18% Similarity=0.263 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeecC-ccchhhhhccceeeccc
Q 001087 767 LQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 767 ~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~asD~~i~~f 825 (1159)
-.|+.-++.+.+..| ..++++||+-||.+|++.|+.||++.. .+. .+..||++...-
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~--~k~~a~~i~~~~ 245 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE--LKKAADYITPSN 245 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH--HHHHSSEEESSG
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH--HHHhCCEEecCC
Confidence 589998888866554 689999999999999999999999944 444 678999987653
No 63
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.65 E-value=0.00015 Score=77.52 Aligned_cols=113 Identities=13% Similarity=0.060 Sum_probs=78.4
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHH
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEV 705 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1159)
+..++.+++.+.|+.+++.|++++++||-....+..+++.+|+..--...+....+.
T Consensus 84 ~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g----------------------- 140 (202)
T TIGR01490 84 IESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG----------------------- 140 (202)
T ss_pred HHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC-----------------------
Confidence 355789999999999999999999999999999999999999832000000000000
Q ss_pred HHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC---c
Q 001087 706 KRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR---K 782 (1159)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g---~ 782 (1159)
..+|+... -.+.++.|...++.+.+..+ .
T Consensus 141 -------------------------~~~g~~~~-----------------------~~~~g~~K~~~l~~~~~~~~~~~~ 172 (202)
T TIGR01490 141 -------------------------IYTGNIDG-----------------------NNCKGEGKVHALAELLAEEQIDLK 172 (202)
T ss_pred -------------------------EEeCCccC-----------------------CCCCChHHHHHHHHHHHHcCCCHH
Confidence 11221110 11246778877766544444 3
Q ss_pred EEEEecCCccCHHHHHhcccceeecCc
Q 001087 783 ITLSIGDGANDVSMIQAAHIGVGISGQ 809 (1159)
Q Consensus 783 ~vl~iGDG~NDv~mL~~AdVGIgisg~ 809 (1159)
.++++||+.+|.+|++.|+.++.+...
T Consensus 173 ~~~~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 173 DSYAYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred HcEeeeCCcccHHHHHhCCCcEEeCCC
Confidence 689999999999999999999988654
No 64
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.61 E-value=0.00018 Score=75.78 Aligned_cols=42 Identities=12% Similarity=0.081 Sum_probs=38.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.++++.|++.|+++.++|+.....+..+....|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 478999999999999999999999999999999998888874
No 65
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.55 E-value=0.00043 Score=77.04 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=36.1
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.-+.+.++|+.|+++|+++.+.||-....+..+.+++|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4446899999999999999999999999999999999874
No 66
>PLN02887 hydrolase family protein
Probab=97.55 E-value=0.00046 Score=84.41 Aligned_cols=55 Identities=27% Similarity=0.436 Sum_probs=45.9
Q ss_pred hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeecc
Q 001087 768 QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 768 qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~ 824 (1159)
.|+.-++.+.+..| .-|+++|||.||.+||+.|+.||+| .+.+. .+.+||++...
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~ee--VK~~Ad~VT~s 565 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEK--TKAVADVIGVS 565 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHH--HHHhCCEEeCC
Confidence 78888888866665 5699999999999999999999999 45554 77889998754
No 67
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.53 E-value=0.00073 Score=75.84 Aligned_cols=39 Identities=8% Similarity=0.106 Sum_probs=35.7
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
+-+.+.++|++|+++||++++.||-....+..+..++|+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~ 63 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGL 63 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCC
Confidence 345688999999999999999999999999999999997
No 68
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=97.50 E-value=0.00043 Score=77.69 Aligned_cols=55 Identities=25% Similarity=0.420 Sum_probs=43.7
Q ss_pred hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeecc
Q 001087 768 QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 768 qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~ 824 (1159)
.|+.-++.+.+..| .-|+++||+.||.+|++.|++||++. +.+. .+..||++..+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~--lk~~Ad~v~~~ 257 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDA--VKARADLVIGD 257 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHH--HHHhCCEEEec
Confidence 68887776655555 56999999999999999999999984 3333 56789998864
No 69
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.43 E-value=0.00042 Score=75.10 Aligned_cols=38 Identities=13% Similarity=0.240 Sum_probs=35.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 666 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~ 666 (1159)
+++||+.++++.|++.|+++.++||-....+..+....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 68999999999999999999999999998888888877
No 70
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.42 E-value=0.0011 Score=73.49 Aligned_cols=178 Identities=16% Similarity=0.142 Sum_probs=94.6
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHH-HHHHH
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARF-MREEV 705 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 705 (1159)
..+..+.+.++|+.+++.||++++.||-....+..+..+.++..++ . .+..+...+...... .....+.. ..+..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~--~-~I~~NGa~I~~~~~~-~~~~~~~~~~~~~~ 94 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD--I-WVTSVGSEIYYGGAE-VPDQHWAEYLSEKW 94 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC--E-EEEcCCceEEeCCCC-cCCHHHHHHHhccc
Confidence 4567788999999999999999999999999999999989986544 1 222222222211000 00011100 00000
Q ss_pred -HHHHHHHHHHhhhhc----cccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEE----ecCh--hhHHHHHH
Q 001087 706 -KRELNKCIDEAQQYI----HSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCC----RVSP--LQKAQVTS 774 (1159)
Q Consensus 706 -~~~~~~~~~~~~~~~----~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~----R~sP--~qK~~iV~ 774 (1159)
...+........... ...+..++.+..+.......+ .++.+.+......++.++++ .+.| ..|..-++
T Consensus 95 ~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~ 173 (249)
T TIGR01485 95 QRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI-KQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQ 173 (249)
T ss_pred CHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHH-HHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHH
Confidence 001111111111000 011112333333322211111 22233333222223222322 4555 47888888
Q ss_pred HHHhccC---cEEEEecCCccCHHHHHh-cccceeecCc
Q 001087 775 LVKKGAR---KITLSIGDGANDVSMIQA-AHIGVGISGQ 809 (1159)
Q Consensus 775 ~lk~~~g---~~vl~iGDG~NDv~mL~~-AdVGIgisg~ 809 (1159)
.+.+..| ..|+++||+.||++|++. +..||++.+.
T Consensus 174 ~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 174 YLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred HHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 8866544 679999999999999998 6789999544
No 71
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.42 E-value=0.0013 Score=72.45 Aligned_cols=42 Identities=10% Similarity=0.025 Sum_probs=37.3
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
+..-+.+.++|+.|+++||.+++.||-.......+..++++-
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 345566899999999999999999999999999999999973
No 72
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=97.41 E-value=0.00053 Score=76.29 Aligned_cols=61 Identities=21% Similarity=0.383 Sum_probs=48.2
Q ss_pred EecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeecc
Q 001087 762 CRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 762 ~R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~ 824 (1159)
-.+.|. .|+.-++.+.+..| ..++++||+.||++|++.|+.|+++. +.+. .+..||++...
T Consensus 180 leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~--~k~~a~~~~~~ 246 (256)
T TIGR00099 180 IEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEE--LKALADYVTDS 246 (256)
T ss_pred EEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHH--HHHhCCEEecC
Confidence 345554 59998888866554 57999999999999999999999994 3343 67789998764
No 73
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.39 E-value=0.00055 Score=67.28 Aligned_cols=117 Identities=18% Similarity=0.158 Sum_probs=77.8
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHH
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEV 705 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1159)
-..++.++++++++.|++.|++++++||.....+......+|+......++.......
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------------------- 78 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAI---------------------- 78 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhh----------------------
Confidence 3458999999999999999999999999999999999999987422111111100000
Q ss_pred HHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEE
Q 001087 706 KRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITL 785 (1159)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl 785 (1159)
.... ..... ....+++++-.|..+..+.+.+ ......++
T Consensus 79 ---------------~~~~----~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 117 (139)
T cd01427 79 ---------------YYPK----EGLFL---------------------GGGPFDIGKPNPDKLLAALKLL-GVDPEEVL 117 (139)
T ss_pred ---------------hccc----ccccc---------------------cccccccCCCCHHHHHHHHHHc-CCChhhEE
Confidence 0000 00000 1123466667777777777776 44467899
Q ss_pred EecCCccCHHHHHh-ccccee
Q 001087 786 SIGDGANDVSMIQA-AHIGVG 805 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~-AdVGIg 805 (1159)
++||+.||+.|.+. +.-+|+
T Consensus 118 ~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 118 MVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred EeCCCHHHHHHHHHcCCceee
Confidence 99999999999998 444443
No 74
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.38 E-value=0.00094 Score=73.31 Aligned_cols=177 Identities=16% Similarity=0.156 Sum_probs=89.3
Q ss_pred HHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHH-H-HHHHHHHHH
Q 001087 635 PACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMR-E-EVKRELNKC 712 (1159)
Q Consensus 635 ~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 712 (1159)
.++++ ++++||++.+.||-....+..+...+++...+ .++..++. .+..... ......+.... + ....++...
T Consensus 21 ~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~-~~I~~nGa--~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 95 (236)
T TIGR02471 21 VELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD-VLIARVGT--EIYYGPE-LQPDRFWQKHIDHDWRRQAVVEA 95 (236)
T ss_pred HHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC-EEEECCCc--eEEeCCC-CCCChhHHHHHhcCCCHHHHHHH
Confidence 35666 68899999999999999999999999874322 12222221 1110000 00000010000 0 000111111
Q ss_pred HHHhhhh-ccccC---CCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEE----ecChh--hHHHHHHHHHhccC-
Q 001087 713 IDEAQQY-IHSIS---GEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCC----RVSPL--QKAQVTSLVKKGAR- 781 (1159)
Q Consensus 713 ~~~~~~~-~~~~~---~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~----R~sP~--qK~~iV~~lk~~~g- 781 (1159)
....... .+... ..+..+..+.+.... + .++.+.+......++.+.++ .+.|. .|...++.+.++.|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~ 173 (236)
T TIGR02471 96 LADIPGLTLQDDQEQGPFKISYLLDPEGEPI-L-PQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGL 173 (236)
T ss_pred HhcCCCcEeCChhcCCCeeEEEEECcccchH-H-HHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCC
Confidence 1111100 00111 122233333321110 0 12222332222112222222 35564 89999988866555
Q ss_pred --cEEEEecCCccCHHHHHhcccceeecCccchhhhhccc
Q 001087 782 --KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASD 819 (1159)
Q Consensus 782 --~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD 819 (1159)
.-++++||+.||.+|++.|+.||++.+.+.. .+..||
T Consensus 174 ~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~ 212 (236)
T TIGR02471 174 PLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRH 212 (236)
T ss_pred CHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhc
Confidence 3589999999999999999999999554332 566788
No 75
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.33 E-value=0.001 Score=72.32 Aligned_cols=43 Identities=9% Similarity=0.010 Sum_probs=38.1
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.++.-+++.++|+.|+++|+++.+.||-....+..+..++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455667999999999999999999999999999999999974
No 76
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.22 E-value=0.0022 Score=69.56 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=34.1
Q ss_pred hHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 634 VPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 634 v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
+.++|+.|+++||++.+.||-....+..+...+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999999999999999999999999999974
No 77
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.21 E-value=0.0031 Score=70.92 Aligned_cols=42 Identities=14% Similarity=0.088 Sum_probs=38.0
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
+.+-+++.++|+.|++.|+++.+.||-....+..+..++|+.
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 345677999999999999999999999999999999999974
No 78
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.20 E-value=0.0012 Score=71.76 Aligned_cols=42 Identities=21% Similarity=0.260 Sum_probs=38.6
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.+.++.|++.|+++.++||.....+..+....|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999998999888874
No 79
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.09 E-value=0.0034 Score=68.06 Aligned_cols=44 Identities=25% Similarity=0.283 Sum_probs=40.9
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 670 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~ 670 (1159)
+.++-+|++++++.|+++|++.-++|++....+..+....|+..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~ 130 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD 130 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc
Confidence 66789999999999999999999999999999999999988853
No 80
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.09 E-value=0.0044 Score=75.82 Aligned_cols=37 Identities=5% Similarity=0.003 Sum_probs=34.2
Q ss_pred CChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 632 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 632 ~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
+.+.++|+.|+++||++.+.||-....+..+++++++
T Consensus 436 ~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 436 STALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4678999999999999999999999999999999986
No 81
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.04 E-value=0.0069 Score=67.63 Aligned_cols=182 Identities=11% Similarity=0.186 Sum_probs=92.2
Q ss_pred cccCChHHHHHHHHH-cCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLAR-AGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~-aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
.+-+++.++|+.|++ .|++++++||-....+..+....++ .++..++.. +.+.........+.......+.+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~-----~~i~~nGa~--i~~~~~~~~~~~l~~~~~~~i~~ 108 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRF-----PLAGVHGAE--RRDINGKTHIVHLPDAIARDISV 108 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccc-----eEEEeCCCe--eecCCCCeeeccCChhHHHHHHH
Confidence 345788899999998 7999999999999998887765542 122222111 10000000000011111122222
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCce------EEEecCh--hhHHHHHHHHHhc
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSV------VCCRVSP--LQKAQVTSLVKKG 779 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v------I~~R~sP--~qK~~iV~~lk~~ 779 (1159)
.+.+....... ..-.....+++........ -++.+......+...+..+ -+-.+.| ..|+.-++.+.+.
T Consensus 109 ~l~~~~~~~pg--~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~ 185 (266)
T PRK10187 109 QLHTALAQLPG--AELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQE 185 (266)
T ss_pred HHHHHhccCCC--cEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHh
Confidence 22221111100 0001122334433322210 0111222222333222211 2233444 4899988776555
Q ss_pred cC---cEEEEecCCccCHHHHHhc----ccceeecCccchhhhhccceeeccc
Q 001087 780 AR---KITLSIGDGANDVSMIQAA----HIGVGISGQEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 780 ~g---~~vl~iGDG~NDv~mL~~A----dVGIgisg~e~~qA~~asD~~i~~f 825 (1159)
.| ..++++||+.||.+|++.+ ..||.+.. |...|++.+.+-
T Consensus 186 ~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~-----a~~~A~~~l~~~ 233 (266)
T PRK10187 186 APFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGT-----GATQASWRLAGV 233 (266)
T ss_pred cCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECC-----CCCcCeEeCCCH
Confidence 54 6799999999999999999 77777732 335678877753
No 82
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.04 E-value=0.0039 Score=66.72 Aligned_cols=38 Identities=21% Similarity=0.342 Sum_probs=34.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 666 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~ 666 (1159)
++-+.+.++|++|++.|+++.++||-....+..+....
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~ 54 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQL 54 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence 46688899999999999999999999999999988873
No 83
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=96.81 E-value=0.0038 Score=67.14 Aligned_cols=41 Identities=20% Similarity=0.237 Sum_probs=37.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+-....+..+....|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 68899999999999999999999999988888888888874
No 84
>PLN02382 probable sucrose-phosphatase
Probab=96.78 E-value=0.011 Score=70.25 Aligned_cols=169 Identities=18% Similarity=0.101 Sum_probs=88.8
Q ss_pred HHH-HHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHH-H-HHHHHHH
Q 001087 636 ACI-ETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREE-V-KRELNKC 712 (1159)
Q Consensus 636 etI-~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 712 (1159)
+++ +.+++.|+...+.||-....+..+.+..++..++.- +......+...+... ....+....+. . ...+.+.
T Consensus 35 ~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~---I~~nGt~I~~~~~~~-~d~~w~~~l~~~w~~~~v~~~ 110 (413)
T PLN02382 35 NALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDIT---IMSVGTEIAYGESMV-PDHGWVEYLNKKWDREIVVEE 110 (413)
T ss_pred HHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEE---EEcCCcEEEeCCCCc-cChhHHHHHhccCChhhHHHH
Confidence 344 888999999999999999999999999998877622 211221121110000 01111111100 0 0001111
Q ss_pred HHHhhhh----ccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCce----EEEecChh--hHHHHHHHHHhcc--
Q 001087 713 IDEAQQY----IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSV----VCCRVSPL--QKAQVTSLVKKGA-- 780 (1159)
Q Consensus 713 ~~~~~~~----~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v----I~~R~sP~--qK~~iV~~lk~~~-- 780 (1159)
....... .......+..+..+.+....+ .+++.+.+......++.+ -+..+.|. .|+.-++.+.+..
T Consensus 111 ~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~ 189 (413)
T PLN02382 111 TSKFPELKLQPETEQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKA 189 (413)
T ss_pred HhcCCCcccCCcccCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhh
Confidence 1111000 001112233444443332221 223333333211112111 23466775 4999888886654
Q ss_pred -C---cEEEEecCCccCHHHHHhcc-cceeecCc
Q 001087 781 -R---KITLSIGDGANDVSMIQAAH-IGVGISGQ 809 (1159)
Q Consensus 781 -g---~~vl~iGDG~NDv~mL~~Ad-VGIgisg~ 809 (1159)
| ..|+++||+.||.+||+.|+ .||+|.+.
T Consensus 190 ~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 190 EGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred cCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence 3 47899999999999999999 69999543
No 85
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.70 E-value=0.0048 Score=69.22 Aligned_cols=42 Identities=12% Similarity=0.185 Sum_probs=36.3
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
..++.+|+.++++.|++.|+++.++||-..+.+..+....|+
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 347889999999999999999999999888877777766665
No 86
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=96.69 E-value=0.0057 Score=65.46 Aligned_cols=41 Identities=24% Similarity=0.334 Sum_probs=37.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++||.....+..+-...|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 78899999999999999999999999888888888877774
No 87
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.66 E-value=0.02 Score=63.45 Aligned_cols=44 Identities=9% Similarity=0.245 Sum_probs=40.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccC
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE 672 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~ 672 (1159)
++++|+++.++.|++.||++.++||=-...+..+.++.|+....
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 57999999999999999999999999999999999999986554
No 88
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.51 E-value=0.0088 Score=65.32 Aligned_cols=41 Identities=22% Similarity=0.123 Sum_probs=36.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+.....+..+-...|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 57899999999999999999999999888877777777763
No 89
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.39 E-value=0.015 Score=65.19 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=38.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++-++|+.....+..+-...||.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 67899999999999999999999999999999998888874
No 90
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.37 E-value=0.023 Score=61.06 Aligned_cols=111 Identities=15% Similarity=0.135 Sum_probs=76.1
Q ss_pred cccCChHHHHH-HHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIE-TLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 629 ~lq~~v~etI~-~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
.+.|++.++|+ .+++.|++++++|+=....+..+|+..++...+ +++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57999999996 788899999999999999999999986664421 22211100
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEe
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 787 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~i 787 (1159)
+.+|.. +.--.|.-++|..-++..-.......-+=
T Consensus 147 -----------------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aY 181 (210)
T TIGR01545 147 -----------------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGY 181 (210)
T ss_pred -----------------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEe
Confidence 011100 01123456788775553312223455688
Q ss_pred cCCccCHHHHHhcccceeecCccc
Q 001087 788 GDGANDVSMIQAAHIGVGISGQEG 811 (1159)
Q Consensus 788 GDG~NDv~mL~~AdVGIgisg~e~ 811 (1159)
||..||.|||+.|+-.+.+++.+.
T Consensus 182 sDS~~D~pmL~~a~~~~~Vnp~~~ 205 (210)
T TIGR01545 182 SDSKQDNPLLAFCEHRWRVSKRGE 205 (210)
T ss_pred cCCcccHHHHHhCCCcEEECcchH
Confidence 999999999999999999977654
No 91
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.26 E-value=0.1 Score=67.04 Aligned_cols=181 Identities=16% Similarity=0.145 Sum_probs=89.7
Q ss_pred ccCChHHHHHHHHH-cCCeEEEEeCCcHhHHHHHHHHcC--ccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHH
Q 001087 630 LQEGVPACIETLAR-AGIKIWVLTGDKMETAINIAYACN--LINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVK 706 (1159)
Q Consensus 630 lq~~v~etI~~L~~-aGIkvwmLTGD~~eTAi~Ia~~~g--l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (1159)
+-+++.++++.|.+ .|+.|+++||-............+ ++.++...+...+. .. .........+ ++.+.
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~--~w---~~~~~~~~~w---~~~v~ 586 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGG--EW---QLLEPVATEW---KDAVR 586 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCC--ce---EECCCcchhH---HHHHH
Confidence 55778889999999 699999999999998877654333 22222221111100 00 0000001111 12222
Q ss_pred HHHHHHHHHhhhhccccCCCceEEEEc--c--cchhHhcchhHHHHHHHHhhcCCceEE-----EecCh--hhHHHHHHH
Q 001087 707 RELNKCIDEAQQYIHSISGEKLALIID--G--KCLMYALDPSLRVILLNLSLNCSSVVC-----CRVSP--LQKAQVTSL 775 (1159)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~lvi~--G--~~l~~~l~~~~~~~~~~l~~~~~~vI~-----~R~sP--~qK~~iV~~ 775 (1159)
.-++........ ........+++.. . ..+......++...+..+.......+. ..+.| -.|+..++.
T Consensus 587 ~il~~~~~~~~g--s~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ 664 (726)
T PRK14501 587 PILEEFVDRTPG--SFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRR 664 (726)
T ss_pred HHHHHHHhcCCC--cEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHH
Confidence 112111111110 0001122333332 1 111111112333344333222111111 23445 589999988
Q ss_pred HHhcc-CcEEEEecCCccCHHHHHhcc---cceeecCccchhhhhccceeeccc
Q 001087 776 VKKGA-RKITLSIGDGANDVSMIQAAH---IGVGISGQEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 776 lk~~~-g~~vl~iGDG~NDv~mL~~Ad---VGIgisg~e~~qA~~asD~~i~~f 825 (1159)
+.+.. -..++++||+.||.+|++.++ .||.+.. +..+|++.+.+-
T Consensus 665 ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~~~ 713 (726)
T PRK14501 665 LLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLPSQ 713 (726)
T ss_pred HHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCCCH
Confidence 85432 258999999999999999974 4444422 346788988764
No 92
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.21 E-value=0.017 Score=64.14 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=37.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+-....+..+-..+|+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 149 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME 149 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH
Confidence 57899999999999999999999999999998888888874
No 93
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.15 E-value=0.014 Score=63.25 Aligned_cols=42 Identities=17% Similarity=0.202 Sum_probs=37.9
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++-+|+.++++.|++.|+++.++||.....+..+.+..||.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 468899999999999999999999999988888888888864
No 94
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=95.98 E-value=0.021 Score=61.63 Aligned_cols=41 Identities=22% Similarity=0.113 Sum_probs=37.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|+++|+++.++||-....+..+-...|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 37899999999999999999999999998888888888874
No 95
>PRK11590 hypothetical protein; Provisional
Probab=95.86 E-value=0.065 Score=57.68 Aligned_cols=112 Identities=9% Similarity=0.087 Sum_probs=77.4
Q ss_pred cccCChHHHH-HHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACI-ETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 629 ~lq~~v~etI-~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
.+.+|+.++| +.|++.|++++++|+-....+..++...|+.. ...++...-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l--------------------------- 146 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQM--------------------------- 146 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEE---------------------------
Confidence 4589999999 57888999999999999999999999988632 112221110
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEe
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 787 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~i 787 (1159)
....+|+- ..-.|..+.|..-++..-.......-+=
T Consensus 147 ---------------------~~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY 182 (211)
T PRK11590 147 ---------------------QRRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGY 182 (211)
T ss_pred ---------------------EEEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEe
Confidence 00112221 1223557888776654312233455688
Q ss_pred cCCccCHHHHHhcccceeecCccch
Q 001087 788 GDGANDVSMIQAAHIGVGISGQEGM 812 (1159)
Q Consensus 788 GDG~NDv~mL~~AdVGIgisg~e~~ 812 (1159)
||..||.|||+.|+-.+.+.....+
T Consensus 183 ~Ds~~D~pmL~~a~~~~~vnp~~~l 207 (211)
T PRK11590 183 SDSKQDNPLLYFCQHRWRVTPRGEL 207 (211)
T ss_pred cCCcccHHHHHhCCCCEEECccHHh
Confidence 9999999999999999999876653
No 96
>PTZ00174 phosphomannomutase; Provisional
Probab=95.81 E-value=0.1 Score=57.69 Aligned_cols=48 Identities=25% Similarity=0.335 Sum_probs=38.5
Q ss_pred ecCh--hhHHHHHHHHHhccCcEEEEecC----CccCHHHHHhc-ccceeecCccc
Q 001087 763 RVSP--LQKAQVTSLVKKGARKITLSIGD----GANDVSMIQAA-HIGVGISGQEG 811 (1159)
Q Consensus 763 R~sP--~qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~A-dVGIgisg~e~ 811 (1159)
.+.| -.|+.-++.+.+. ..-|+++|| |-||.+||+.| -.|+++.+.+-
T Consensus 181 eI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~ 235 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPED 235 (247)
T ss_pred EeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHH
Confidence 4444 4899988888554 678999999 99999999987 78888876654
No 97
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=95.77 E-value=0.021 Score=56.30 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=30.6
Q ss_pred HHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 636 ACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 636 etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
--|+.|.++||++-++||-+..-+..=|+++||
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI 74 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGI 74 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCC
Confidence 379999999999999999999999999999998
No 98
>PRK11587 putative phosphatase; Provisional
Probab=95.65 E-value=0.054 Score=58.58 Aligned_cols=40 Identities=23% Similarity=0.222 Sum_probs=33.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++.||+.++++.|+++|+++.++|+.....+..+-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877666555455555
No 99
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=95.42 E-value=0.06 Score=58.21 Aligned_cols=42 Identities=21% Similarity=0.214 Sum_probs=38.6
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.++.+|+++.++.|++.|+++.++||-..+.+..+-...|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999998888888874
No 100
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.34 E-value=0.071 Score=55.43 Aligned_cols=163 Identities=20% Similarity=0.182 Sum_probs=91.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
+|-||+.+|++.|+.. ....+++---..-+..+|.-+|+-..+...-.++-++..+. +..++.+..
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~P------------eeeR~E~L~- 148 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVP------------EEEREELLS- 148 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCC------------hHHHHHHHH-
Confidence 5679999999998865 45666666677788899999988655433222222211111 111111111
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHH----HHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc--Cc
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLR----VILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA--RK 782 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~----~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~--g~ 782 (1159)
.+. ..-.++|.+|-.-+|+-+. ...-+++...++|-. ..|+.+++.+-.-. ..
T Consensus 149 ------~~~----------~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGg-----g~ka~i~e~~~ele~~d~ 207 (315)
T COG4030 149 ------IID----------VIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGG-----GEKAKIMEGYCELEGIDF 207 (315)
T ss_pred ------hcC----------ccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccC-----cchhHHHHHHHhhcCCCc
Confidence 111 0113566655443332110 111122222222211 34556655553222 23
Q ss_pred EEEEecCCccCHHHHHhcc----cceeecCccchhhhhccceeecccccc
Q 001087 783 ITLSIGDGANDVSMIQAAH----IGVGISGQEGMQAVMASDFAIAQFRFL 828 (1159)
Q Consensus 783 ~vl~iGDG~NDv~mL~~Ad----VGIgisg~e~~qA~~asD~~i~~f~~l 828 (1159)
-.+.+||.+.|+.||+++. +.|+..|.|- |..-||+++..-...
T Consensus 208 sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvisp~~~ 255 (315)
T COG4030 208 SAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVISPTAM 255 (315)
T ss_pred ceeEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEeccchh
Confidence 4678999999999999984 5567799998 899999998765443
No 101
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=95.34 E-value=0.089 Score=58.07 Aligned_cols=166 Identities=20% Similarity=0.220 Sum_probs=86.8
Q ss_pred HHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHH-HHHH-HHHHHHHHHHHHhhh
Q 001087 641 LARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIAR-FMRE-EVKRELNKCIDEAQQ 718 (1159)
Q Consensus 641 L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 718 (1159)
..+.++...+.||-+.+.+..+..+.++..++ +.+.+...++-..+ .......|. .+.. .-.+.+.+....+..
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd---~~I~svGt~I~~~~-~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~ 106 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPD---YIITSVGTEIYYGE-NWQPDEEWQAHIDERWDRERVEEILAELPG 106 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-S---EEEETTTTEEEESS-TTEE-HHHHHHHHTT--HHHHHHHHHCHCC
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCC---EEEecCCeEEEEcC-CCcChHHHHHHHHhcCChHHHHHHHHHhhC
Confidence 34778999999999999999999999987653 23333322222211 111111111 1111 011222222222211
Q ss_pred h----ccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCce----EEEecCh--hhHHHHHHHHHhccC---cEEE
Q 001087 719 Y----IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSV----VCCRVSP--LQKAQVTSLVKKGAR---KITL 785 (1159)
Q Consensus 719 ~----~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v----I~~R~sP--~qK~~iV~~lk~~~g---~~vl 785 (1159)
- .......+.+..++.......+ ++++..+..-...|+.+ -+..+.| ..|..-|+.++++.+ ..|+
T Consensus 107 l~~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl 185 (247)
T PF05116_consen 107 LRPQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVL 185 (247)
T ss_dssp EEEGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEE
T ss_pred cccCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEE
Confidence 0 0111233555566655444322 33444443333333222 1234445 489999999976654 4688
Q ss_pred EecCCccCHHHHHhcccceeecCccc
Q 001087 786 SIGDGANDVSMIQAAHIGVGISGQEG 811 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~AdVGIgisg~e~ 811 (1159)
++||+.||.+||..++-||-+.+.+.
T Consensus 186 ~aGDSgND~~mL~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 186 VAGDSGNDLEMLEGGDHGVVVGNAQP 211 (247)
T ss_dssp EEESSGGGHHHHCCSSEEEE-TTS-H
T ss_pred EEeCCCCcHHHHcCcCCEEEEcCCCH
Confidence 89999999999999999998866543
No 102
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=95.29 E-value=0.19 Score=55.40 Aligned_cols=66 Identities=14% Similarity=0.140 Sum_probs=46.0
Q ss_pred EEEecChhhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhc--------ccceeecCccchhhhhccceeecccccc
Q 001087 760 VCCRVSPLQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAA--------HIGVGISGQEGMQAVMASDFAIAQFRFL 828 (1159)
Q Consensus 760 I~~R~sP~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~A--------dVGIgisg~e~~qA~~asD~~i~~f~~l 828 (1159)
+-.+-.+..|...++.+.+..+ ..++++||+.||..|++.+ ..||.+. ++. ....|++.+.+..-+
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v 235 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQV 235 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHH
Confidence 3344556689998888755544 4799999999999999999 3455553 221 345689988865443
No 103
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=95.14 E-value=0.067 Score=56.82 Aligned_cols=44 Identities=25% Similarity=0.191 Sum_probs=39.2
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.++++.++++++++.|++.|+++.++||-....+..+-...|+.
T Consensus 103 ~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 103 IEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred hccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 35567788899999999999999999999999999999988874
No 104
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=94.99 E-value=0.12 Score=58.57 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=31.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 665 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~ 665 (1159)
++.||+.++++.|++.|+++.++|+-..+....+-..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~ 180 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT 180 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 5789999999999999999999999877766655443
No 105
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=94.93 E-value=0.048 Score=59.41 Aligned_cols=41 Identities=20% Similarity=0.194 Sum_probs=35.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCC----cHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGD----KMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD----~~eTAi~Ia~~~gl~ 669 (1159)
.+.+++.+.++.|++.|+++.++|+= ...++.++.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 45556999999999999999999996 667899999889984
No 106
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=94.89 E-value=0.12 Score=60.15 Aligned_cols=41 Identities=15% Similarity=0.161 Sum_probs=37.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.+.+|+.++++.|+++|+++.++|+-..+.+..+-...||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47799999999999999999999999999999988888874
No 107
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=94.70 E-value=0.13 Score=50.67 Aligned_cols=41 Identities=20% Similarity=0.237 Sum_probs=34.5
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCc--------HhHHHHHHHHcCc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDK--------METAINIAYACNL 668 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~--------~eTAi~Ia~~~gl 668 (1159)
-++.+|+.++++.|+++|+++.++|+.. .+.+..+....|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999987 5666666666666
No 108
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=94.69 E-value=0.11 Score=57.48 Aligned_cols=41 Identities=32% Similarity=0.199 Sum_probs=36.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++-+|+.++++.|++.|+++.++||...+.+..+-...|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 46799999999999999999999999998888887777764
No 109
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=94.45 E-value=0.11 Score=55.02 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=36.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++.+|+.++++.|++.|+++.++|+-....+..+....||
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 5789999999999999999999999888888888888886
No 110
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=94.45 E-value=0.1 Score=56.83 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=36.2
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeC----CcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTG----DKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTG----D~~eTAi~Ia~~~gl~ 669 (1159)
-.+.+|+.++++.|++.|+++.++|| -...|+.++.+..|+-
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 44778899999999999999999999 3466899988888883
No 111
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=94.41 E-value=0.16 Score=61.52 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=38.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.||+.++++.|++.|+++-++|+-..+.+..+-..+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 68899999999999999999999999999999998888874
No 112
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=94.27 E-value=0.22 Score=53.84 Aligned_cols=40 Identities=13% Similarity=0.159 Sum_probs=35.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++.+|+.++++.|++.|++++++|+=....+...-...|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999877777777777776
No 113
>PLN02811 hydrolase
Probab=93.85 E-value=0.19 Score=54.39 Aligned_cols=31 Identities=26% Similarity=0.339 Sum_probs=27.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETA 659 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTA 659 (1159)
++.+|+.++|+.|++.|+++.++||-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 5789999999999999999999998765533
No 114
>PRK06769 hypothetical protein; Validated
Probab=93.78 E-value=0.32 Score=50.53 Aligned_cols=41 Identities=29% Similarity=0.254 Sum_probs=32.1
Q ss_pred cCcEEEEEeeecc----cccCChHHHHHHHHHcCCeEEEEeCCcH
Q 001087 616 KDLTLIGCTAIED----KLQEGVPACIETLARAGIKIWVLTGDKM 656 (1159)
Q Consensus 616 ~dl~llG~~~ieD----~lq~~v~etI~~L~~aGIkvwmLTGD~~ 656 (1159)
.|-++.|-..+.+ ++.+||+++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4556656545443 2689999999999999999999998653
No 115
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=93.76 E-value=0.29 Score=54.08 Aligned_cols=41 Identities=20% Similarity=0.087 Sum_probs=37.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+-....+..+-...||.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999998888888874
No 116
>PRK09449 dUMP phosphatase; Provisional
Probab=93.64 E-value=0.31 Score=52.77 Aligned_cols=39 Identities=15% Similarity=0.096 Sum_probs=32.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++.+|+.++++.|+ +|+++.++|+.....+...-.+.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 47899999999999 6899999999877777666666665
No 117
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=93.49 E-value=0.34 Score=54.23 Aligned_cols=41 Identities=27% Similarity=0.152 Sum_probs=34.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++-+|+.++++.|++.|+++.++||.....+..+-...|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999888777666666553
No 118
>PLN02940 riboflavin kinase
Probab=93.26 E-value=0.3 Score=57.57 Aligned_cols=40 Identities=13% Similarity=0.071 Sum_probs=32.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHH-HcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAY-ACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~-~~gl 668 (1159)
++.+|+.++++.|++.|+++.++|+-....+...-. ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999988777665443 4555
No 119
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=93.20 E-value=0.2 Score=51.34 Aligned_cols=44 Identities=18% Similarity=0.170 Sum_probs=40.3
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-..++.+|+.+.++.|++.|++++++|+-..+.........|+.
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 45688999999999999999999999999999999999988886
No 120
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=93.18 E-value=0.3 Score=50.84 Aligned_cols=40 Identities=25% Similarity=0.262 Sum_probs=32.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|+++|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 688999999999999999999999977776 4444446663
No 121
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=93.18 E-value=0.52 Score=49.33 Aligned_cols=27 Identities=26% Similarity=0.288 Sum_probs=24.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
++.+|++++++.|++.|+++.++|...
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999999999999875
No 122
>PLN02580 trehalose-phosphatase
Probab=93.11 E-value=2.2 Score=49.81 Aligned_cols=63 Identities=14% Similarity=0.235 Sum_probs=42.3
Q ss_pred ecCh---hhHHHHHHHHHhccC-----c-EEEEecCCccCHHHHHh-----cccceeecCccchhhhhccceeecccccc
Q 001087 763 RVSP---LQKAQVTSLVKKGAR-----K-ITLSIGDGANDVSMIQA-----AHIGVGISGQEGMQAVMASDFAIAQFRFL 828 (1159)
Q Consensus 763 R~sP---~qK~~iV~~lk~~~g-----~-~vl~iGDG~NDv~mL~~-----AdVGIgisg~e~~qA~~asD~~i~~f~~l 828 (1159)
.+.| -.|..-|+.+-+..| . .++++||+.||-.|++. +++||.++.... .-.|+|.+.+-.-.
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~eV 369 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSEV 369 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHHH
Confidence 4455 499998888755544 1 35899999999999996 466665542111 23577887764433
No 123
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=92.98 E-value=0.33 Score=52.76 Aligned_cols=41 Identities=20% Similarity=0.131 Sum_probs=35.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+-..+.+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 67899999999999999999999998888777766666663
No 124
>PLN03017 trehalose-phosphatase
Probab=92.67 E-value=5.7 Score=46.01 Aligned_cols=200 Identities=16% Similarity=0.141 Sum_probs=99.7
Q ss_pred CcEEEEEeeecc--cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccc--h-hc-c
Q 001087 617 DLTLIGCTAIED--KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIR--D-VE-E 690 (1159)
Q Consensus 617 dl~llG~~~ieD--~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~--~-~~-~ 690 (1159)
|.+|+-++.-.| .+-++..++|+.|+ .|++++++||-......... ++ .+..++..++..-... . .. .
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~~ 192 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV---KL--AELYYAGSHGMDIKGPAKGFSRHK 192 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh---cc--cCceEEEcCCcEEecCCCcceecc
Confidence 666665554333 37788899999999 78999999999999988773 33 1222222222110000 0 00 0
Q ss_pred cCC------hHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCC------c
Q 001087 691 RGD------PVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCS------S 758 (1159)
Q Consensus 691 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~------~ 758 (1159)
++. ...-+....+.+...+.+....... ..-..+.+++.+-=.......-.++...+..++.... .
T Consensus 193 ~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pG--a~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~G 270 (366)
T PLN03017 193 RVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPG--AKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQG 270 (366)
T ss_pred ccccccccccchhhHHHHHHHHHHHHHHHhcCCC--CEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCC
Confidence 000 0000111112222223222222211 1112344555543332221111223333333322221 1
Q ss_pred eEEEecCh---hhHHHHHHHHHhccC------cEEEEecCCccCHHHHHhcc---cceee-cCc-cchhhhhccceeecc
Q 001087 759 VVCCRVSP---LQKAQVTSLVKKGAR------KITLSIGDGANDVSMIQAAH---IGVGI-SGQ-EGMQAVMASDFAIAQ 824 (1159)
Q Consensus 759 vI~~R~sP---~qK~~iV~~lk~~~g------~~vl~iGDG~NDv~mL~~Ad---VGIgi-sg~-e~~qA~~asD~~i~~ 824 (1159)
--.-.+.| -+|...|+.+-+..| ..++++||-..|-.|++... -|+|| -|. .+ ..+|+|.+.+
T Consensus 271 kkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~d 347 (366)
T PLN03017 271 RKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQD 347 (366)
T ss_pred CeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCC
Confidence 11223344 499999988755432 36899999999999999774 35665 232 22 2468888876
Q ss_pred ccc
Q 001087 825 FRF 827 (1159)
Q Consensus 825 f~~ 827 (1159)
-.-
T Consensus 348 p~e 350 (366)
T PLN03017 348 PSE 350 (366)
T ss_pred HHH
Confidence 443
No 125
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=92.66 E-value=0.29 Score=51.14 Aligned_cols=39 Identities=18% Similarity=0.268 Sum_probs=32.5
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
-++.+|+.++++.|++.|+++.++|+- ..+..+-...|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l 125 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGL 125 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcCh
Confidence 478999999999999999999999986 555556666666
No 126
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=92.59 E-value=0.24 Score=51.79 Aligned_cols=39 Identities=21% Similarity=0.305 Sum_probs=30.4
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
.++.||+.++++.|+++|+++.++|+.. .+..+-...||
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l 124 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGL 124 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCc
Confidence 3678999999999999999999999743 23445555555
No 127
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=92.48 E-value=0.61 Score=48.36 Aligned_cols=53 Identities=21% Similarity=0.160 Sum_probs=42.9
Q ss_pred CcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCC-cHhHHHHHHHHcCcc
Q 001087 617 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGD-KMETAINIAYACNLI 669 (1159)
Q Consensus 617 dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD-~~eTAi~Ia~~~gl~ 669 (1159)
+-......+-+-++.+|+.++++.|+++|+++-++|+= ...++..+-...|+-
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 33455556666788999999999999999999999964 888888887777763
No 128
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=92.46 E-value=0.3 Score=55.61 Aligned_cols=45 Identities=20% Similarity=0.115 Sum_probs=40.9
Q ss_pred eecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 625 AIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 625 ~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
...+++.+++.++++.|++.|+++.++||-...++..+...+++.
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 357899999999999999999999999999999999888888774
No 129
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=92.37 E-value=3.3 Score=53.84 Aligned_cols=38 Identities=11% Similarity=0.165 Sum_probs=30.4
Q ss_pred cccCChHHHHHHH-HHcCCeEEEEeCCcHhHHHHHHHHc
Q 001087 629 KLQEGVPACIETL-ARAGIKIWVLTGDKMETAINIAYAC 666 (1159)
Q Consensus 629 ~lq~~v~etI~~L-~~aGIkvwmLTGD~~eTAi~Ia~~~ 666 (1159)
.+-+++.++++.| ++.|+.++++||-...+....-..+
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 4556778888887 6679999999999999988776543
No 130
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=92.37 E-value=0.63 Score=48.46 Aligned_cols=46 Identities=20% Similarity=0.223 Sum_probs=31.8
Q ss_pred cEEEEecCCccCHHHHHhcccc--eee-cCccchh-hhhccceeeccccc
Q 001087 782 KITLSIGDGANDVSMIQAAHIG--VGI-SGQEGMQ-AVMASDFAIAQFRF 827 (1159)
Q Consensus 782 ~~vl~iGDG~NDv~mL~~AdVG--Igi-sg~e~~q-A~~asD~~i~~f~~ 827 (1159)
.-++||||..+|+.+=++|++. |++ .|..... ....+|+++.++.-
T Consensus 124 ~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~e 173 (176)
T TIGR00213 124 AQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLAD 173 (176)
T ss_pred hhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHH
Confidence 6688999999999999999985 355 4432111 12348888876543
No 131
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=91.22 E-value=1.3 Score=45.11 Aligned_cols=34 Identities=26% Similarity=0.298 Sum_probs=30.7
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHH
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAI 660 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi 660 (1159)
+|.+.+++.++++.+++.|+++..+||-....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999998777663
No 132
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=91.07 E-value=0.92 Score=48.94 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=35.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++. +++.++|+-..+.+..+-.+.|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 6789999999999999 999999998888888888877774
No 133
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=91.03 E-value=0.67 Score=45.53 Aligned_cols=39 Identities=10% Similarity=0.109 Sum_probs=32.8
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCC-cHhHHHHHHHHcC
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGD-KMETAINIAYACN 667 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD-~~eTAi~Ia~~~g 667 (1159)
++.+|+.++++.|+++|+++.++|+- ..+.+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999998 6766666555444
No 134
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=90.80 E-value=0.85 Score=47.22 Aligned_cols=41 Identities=20% Similarity=0.292 Sum_probs=33.7
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCc-HhHHHHHHHHcCc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDK-METAINIAYACNL 668 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~-~eTAi~Ia~~~gl 668 (1159)
.++-++++++++.|++.|+++.++|+-. ...+..+.+.+|+
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3678999999999999999999999977 4556666666665
No 135
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=90.56 E-value=1.4 Score=44.91 Aligned_cols=37 Identities=16% Similarity=0.209 Sum_probs=29.9
Q ss_pred hhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccce
Q 001087 767 LQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGV 804 (1159)
Q Consensus 767 ~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI 804 (1159)
.+|..+|+.+ ++....+.+||||+-|++|-+.+|+=.
T Consensus 146 ~dK~~vI~~l-~e~~e~~fy~GDsvsDlsaaklsDllF 182 (220)
T COG4359 146 HDKSSVIHEL-SEPNESIFYCGDSVSDLSAAKLSDLLF 182 (220)
T ss_pred CCcchhHHHh-hcCCceEEEecCCcccccHhhhhhhHh
Confidence 4799999999 566677999999999988776666544
No 136
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=90.32 E-value=0.76 Score=46.28 Aligned_cols=27 Identities=30% Similarity=0.439 Sum_probs=24.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
++.+|+.++++.|++.|+++.++|...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999865
No 137
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=90.26 E-value=1 Score=46.25 Aligned_cols=26 Identities=27% Similarity=0.505 Sum_probs=23.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCC
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGD 654 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD 654 (1159)
++-+|+.++++.|++.|+++.++|--
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999999999999999999974
No 138
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=90.20 E-value=0.84 Score=48.55 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=30.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++-+|+.++++.|+++|+++.++|+-... +..+-...|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 68899999999999999999999975443 3445555555
No 139
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=90.09 E-value=1 Score=45.42 Aligned_cols=40 Identities=18% Similarity=0.310 Sum_probs=33.0
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 666 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~ 666 (1159)
+.+..+|+.++++.|++.|+++.++|+-..+.+...-+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4455689999999999999999999998888777655543
No 140
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=89.06 E-value=1.2 Score=51.43 Aligned_cols=26 Identities=27% Similarity=0.406 Sum_probs=24.4
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeC
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTG 653 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTG 653 (1159)
-++.||+.++++.|+++|+++.++|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 46789999999999999999999998
No 141
>PLN02423 phosphomannomutase
Probab=87.95 E-value=3.1 Score=45.84 Aligned_cols=49 Identities=20% Similarity=0.329 Sum_probs=39.3
Q ss_pred EEecChh--hHHHHHHHHHhccCcEEEEecC----CccCHHHHHh-cccceeecCccc
Q 001087 761 CCRVSPL--QKAQVTSLVKKGARKITLSIGD----GANDVSMIQA-AHIGVGISGQEG 811 (1159)
Q Consensus 761 ~~R~sP~--qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~-AdVGIgisg~e~ 811 (1159)
+..+.|. .|+.-++.+ + ...-|++.|| |.||.+||+. -=.|+.++|-+.
T Consensus 180 ~iDi~~~gvnKg~al~~L-~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFL-E-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEeeCCCCHHHHHHHh-c-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 3344543 899999999 4 6778999999 9999999996 777888887654
No 142
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=87.66 E-value=2.4 Score=47.10 Aligned_cols=43 Identities=12% Similarity=0.175 Sum_probs=31.7
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhH---HHHHHHHcCcc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMET---AINIAYACNLI 669 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eT---Ai~Ia~~~gl~ 669 (1159)
..++-+|+.+.++.|++.|+++.++|+-.... ....-+..|+-
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 44577999999999999999999999965332 33333445553
No 143
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=87.44 E-value=0.7 Score=46.64 Aligned_cols=43 Identities=14% Similarity=0.022 Sum_probs=37.3
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
..-+++||+.+.++.|+ .++++.+.|.=..+.|..+-..+++.
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34468999999999999 57999999999999999988877763
No 144
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=86.20 E-value=2.1 Score=44.17 Aligned_cols=26 Identities=31% Similarity=0.496 Sum_probs=23.2
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
+-+|+.++++.|+++|+++.++|.-.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~ 68 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQS 68 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 34999999999999999999999743
No 145
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=85.92 E-value=31 Score=38.09 Aligned_cols=49 Identities=10% Similarity=0.114 Sum_probs=39.0
Q ss_pred EEeeecccccCChHHHHHHHHHcCCeEEEEeC---CcHhHHHHHHHHcCccc
Q 001087 622 GCTAIEDKLQEGVPACIETLARAGIKIWVLTG---DKMETAINIAYACNLIN 670 (1159)
Q Consensus 622 G~~~ieD~lq~~v~etI~~L~~aGIkvwmLTG---D~~eTAi~Ia~~~gl~~ 670 (1159)
|++.-.+.+=+++.++|+.|++.|++++++|| -..+.......+.|+-.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44445567778999999999999999999997 55777777777788743
No 146
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=85.18 E-value=2.8 Score=45.31 Aligned_cols=39 Identities=15% Similarity=0.280 Sum_probs=32.0
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHH
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAY 664 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~ 664 (1159)
.+-++.+|+.++++.|+++|+++.++|.........+-.
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~ 130 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFG 130 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh
Confidence 345789999999999999999999999987765555443
No 147
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=85.02 E-value=1.4 Score=47.17 Aligned_cols=29 Identities=31% Similarity=0.340 Sum_probs=25.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHh
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKME 657 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~e 657 (1159)
++.+|+.++++.|++.|+++.++|.....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 57899999999999999999999986543
No 148
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=83.37 E-value=3.7 Score=54.96 Aligned_cols=41 Identities=17% Similarity=0.017 Sum_probs=36.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.+-+|+.++++.|+++|+++.++|+-..+.+..+-.+.|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 46799999999999999999999998888888777777774
No 149
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=81.40 E-value=3.3 Score=47.68 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=32.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 665 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~ 665 (1159)
++-+|+.++|+.|++.|+++.+.|.-..+.|..+-..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 4568999999999999999999999988888887765
No 150
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=81.38 E-value=6.2 Score=43.32 Aligned_cols=48 Identities=6% Similarity=0.099 Sum_probs=36.4
Q ss_pred EEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHH--HHHHHcCcc
Q 001087 622 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAI--NIAYACNLI 669 (1159)
Q Consensus 622 G~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi--~Ia~~~gl~ 669 (1159)
|.+.-.+++-||++++++.|+++|+++.++|.-....+. ....+.|+-
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 556667788999999999999999999999994443332 344566663
No 151
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=80.90 E-value=6.8 Score=42.63 Aligned_cols=41 Identities=12% Similarity=0.172 Sum_probs=33.9
Q ss_pred cccCChHHHHHHH--HHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETL--ARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L--~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
|+.+|.++.++.+ ++.|+.+.++|-=|..--..|=+.-||-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 5779999999999 4589999999988877777777777764
No 152
>PHA02597 30.2 hypothetical protein; Provisional
Probab=79.25 E-value=6.8 Score=41.37 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=25.2
Q ss_pred HHHHHHHHHhccC-cEEEEecCCccCHHHHHhc--ccce
Q 001087 769 KAQVTSLVKKGAR-KITLSIGDGANDVSMIQAA--HIGV 804 (1159)
Q Consensus 769 K~~iV~~lk~~~g-~~vl~iGDG~NDv~mL~~A--dVGI 804 (1159)
|..++..+.++.| ..+++|||..+|+-+-++| ++-.
T Consensus 132 kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 132 KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 3444443323344 5688999999999999998 8765
No 153
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=78.37 E-value=13 Score=40.51 Aligned_cols=69 Identities=20% Similarity=0.242 Sum_probs=34.1
Q ss_pred CCceEEEecChhhHHHHHHHHHhccC------cEEEEecCCccCHHHHHhccc----ceee--cCccchhhhhccceeec
Q 001087 756 CSSVVCCRVSPLQKAQVTSLVKKGAR------KITLSIGDGANDVSMIQAAHI----GVGI--SGQEGMQAVMASDFAIA 823 (1159)
Q Consensus 756 ~~~vI~~R~sP~qK~~iV~~lk~~~g------~~vl~iGDG~NDv~mL~~AdV----GIgi--sg~e~~qA~~asD~~i~ 823 (1159)
-+.+|=.|..-..|...|+.+-+..+ ..++++||...|-.|++..+= |+++ ...+.-....+|+|-+.
T Consensus 153 g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 153 GKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp -SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred CCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 35566677766779999987755554 379999999999999998654 3443 32221112345666554
Q ss_pred c
Q 001087 824 Q 824 (1159)
Q Consensus 824 ~ 824 (1159)
+
T Consensus 233 ~ 233 (235)
T PF02358_consen 233 D 233 (235)
T ss_dssp -
T ss_pred c
Confidence 3
No 154
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=77.52 E-value=2.3 Score=39.79 Aligned_cols=48 Identities=15% Similarity=0.162 Sum_probs=36.6
Q ss_pred EEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHH---HHcCcc
Q 001087 622 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIA---YACNLI 669 (1159)
Q Consensus 622 G~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia---~~~gl~ 669 (1159)
|++...+++=||++|+|+.|+++|++++++|-....+...++ .+.|+-
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 566677889999999999999999999999998866655555 456664
No 155
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=77.18 E-value=24 Score=43.08 Aligned_cols=92 Identities=14% Similarity=0.136 Sum_probs=59.2
Q ss_pred hhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchhhhhhhhhHHHHHHH
Q 001087 766 PLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICK 845 (1159)
Q Consensus 766 P~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~lll~~Gr~~~~ri~~ 845 (1159)
-++|..-++.. ........+.||..||.+||+.|+-+..+.-+.. =.+...++.+.+++..||-.++=.-.
T Consensus 174 Ge~Kv~rl~~~-~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~--------~~~~~~~~~~~~~fhdgrl~~~p~~~ 244 (497)
T PLN02177 174 GDHKRDAVLKE-FGDALPDLGLGDRETDHDFMSICKEGYMVPRTKC--------EPLPRNKLLSPVIFHEGRLVQRPTPL 244 (497)
T ss_pred cHHHHHHHHHH-hCCCCceEEEECCccHHHHHHhCCccEEeCCCCC--------CcCCcccCCCceeeeCCcccCCCCHH
Confidence 45676666533 1112223789999999999999999998854221 11666788888888889988876655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 001087 846 VVLYFFYKNLTFTLTQFWFTFQ 867 (1159)
Q Consensus 846 ~i~~~~~kni~~~~~~~~~~~~ 867 (1159)
..+..+.. +-+++++.+.-++
T Consensus 245 ~~l~~~~~-~p~g~~l~~~r~~ 265 (497)
T PLN02177 245 VALLTFLW-MPIGFILSLLRVY 265 (497)
T ss_pred HHHHHHHH-HHHHHHHHHHHHH
Confidence 55554444 2344444444444
No 156
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=76.55 E-value=6.8 Score=41.49 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=26.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMET 658 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eT 658 (1159)
++.+|+.++++.|+++|+++.++|.=....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 478999999999999999999999865443
No 157
>PLN02151 trehalose-phosphatase
Probab=76.21 E-value=90 Score=36.27 Aligned_cols=70 Identities=14% Similarity=0.181 Sum_probs=42.7
Q ss_pred ceEEEecC-hhhHHHHHHHHHhccC------cEEEEecCCccCHHHHHhcc---cceeecCccchhhhhccceeeccccc
Q 001087 758 SVVCCRVS-PLQKAQVTSLVKKGAR------KITLSIGDGANDVSMIQAAH---IGVGISGQEGMQAVMASDFAIAQFRF 827 (1159)
Q Consensus 758 ~vI~~R~s-P~qK~~iV~~lk~~~g------~~vl~iGDG~NDv~mL~~Ad---VGIgisg~e~~qA~~asD~~i~~f~~ 827 (1159)
.|+=-|.. --+|...|+.+.+..+ ..++++||-..|-.|++..+ -|+||.-.++. ..-.|+|.|.+-.-
T Consensus 258 kVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~-k~T~A~y~L~dp~e 336 (354)
T PLN02151 258 KVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYA-KETNASYSLQEPDE 336 (354)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCC-CCCcceEeCCCHHH
Confidence 34434432 3499999988755432 25899999999999998653 24444211110 12368888877443
Q ss_pred c
Q 001087 828 L 828 (1159)
Q Consensus 828 l 828 (1159)
.
T Consensus 337 V 337 (354)
T PLN02151 337 V 337 (354)
T ss_pred H
Confidence 3
No 158
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=73.05 E-value=4.5 Score=43.62 Aligned_cols=39 Identities=10% Similarity=0.160 Sum_probs=30.1
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++.+|++++++.| ++++.++|+...+.+...=...||.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 35668999999998 4999999998877766655555653
No 159
>PLN02645 phosphoglycolate phosphatase
Probab=69.98 E-value=14 Score=42.38 Aligned_cols=47 Identities=28% Similarity=0.392 Sum_probs=39.7
Q ss_pred EEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHH---HHcCc
Q 001087 622 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIA---YACNL 668 (1159)
Q Consensus 622 G~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia---~~~gl 668 (1159)
|++--.+.+=+|++++|+.|++.|++++++|+....+...++ ...|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 666667788899999999999999999999999988877776 44555
No 160
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=69.28 E-value=30 Score=36.07 Aligned_cols=47 Identities=21% Similarity=0.375 Sum_probs=33.0
Q ss_pred ceEEEecChhh--------HHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceee
Q 001087 758 SVVCCRVSPLQ--------KAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI 806 (1159)
Q Consensus 758 ~vI~~R~sP~q--------K~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgi 806 (1159)
.+.+|.-.|++ ...+.+.++ +.+ ....+|||-..|..+-..|+++ ++
T Consensus 89 ~i~~Cph~p~~~c~cRKP~~gm~~~~~~-~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 89 GILYCPHHPEDNCDCRKPKPGMLLSALK-EYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred eEEECCCCCCCCCcccCCChHHHHHHHH-HhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 45666666664 456666664 433 6789999999998887777776 54
No 161
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=67.64 E-value=21 Score=36.77 Aligned_cols=43 Identities=16% Similarity=0.202 Sum_probs=35.2
Q ss_pred ecccccCChHHHHHHHHHcCCe--EEEEeCC-------cHhHHHHHHHHcCc
Q 001087 626 IEDKLQEGVPACIETLARAGIK--IWVLTGD-------KMETAINIAYACNL 668 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIk--vwmLTGD-------~~eTAi~Ia~~~gl 668 (1159)
=++++-+++.+.+++|++++.+ |+++|-- +.+.|..+++.+|+
T Consensus 56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 4677889999999999999874 9999875 36778888888776
No 162
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=63.01 E-value=8.5 Score=40.62 Aligned_cols=30 Identities=30% Similarity=0.632 Sum_probs=24.7
Q ss_pred cEEEEecCCccCHHHHHhcccceeec--Cccc
Q 001087 782 KITLSIGDGANDVSMIQAAHIGVGIS--GQEG 811 (1159)
Q Consensus 782 ~~vl~iGDG~NDv~mL~~AdVGIgis--g~e~ 811 (1159)
+++++.|||.||+||+..-|-.+=+. ..|+
T Consensus 210 r~t~~~GDg~nD~Pl~ev~d~AfiV~~lnre~ 241 (274)
T COG3769 210 RTTLGLGDGPNDAPLLEVMDYAFIVKGLNREG 241 (274)
T ss_pred eEEEecCCCCCcccHHHhhhhheeecccchhh
Confidence 46999999999999999998888554 3555
No 163
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=62.21 E-value=30 Score=37.53 Aligned_cols=30 Identities=23% Similarity=0.245 Sum_probs=26.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMET 658 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eT 658 (1159)
+.-+++.+.++.|++.|++|+++||-....
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 667899999999999999999999987644
No 164
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=60.63 E-value=76 Score=32.30 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=33.1
Q ss_pred EEEecChhhHHHHHHHHHhc----cCcEEEEecCCccCHHHHHhcccc
Q 001087 760 VCCRVSPLQKAQVTSLVKKG----ARKITLSIGDGANDVSMIQAAHIG 803 (1159)
Q Consensus 760 I~~R~sP~qK~~iV~~lk~~----~g~~vl~iGDG~NDv~mL~~AdVG 803 (1159)
+..|-.-+.|....+.++.. .....++-|...+|+.+-+++.|-
T Consensus 94 vi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 94 VISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 44555556888888888543 567889999999999988877654
No 165
>PRK10444 UMP phosphatase; Provisional
Probab=60.19 E-value=9.3 Score=42.20 Aligned_cols=45 Identities=16% Similarity=0.245 Sum_probs=40.3
Q ss_pred EEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHc
Q 001087 622 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 666 (1159)
Q Consensus 622 G~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~ 666 (1159)
|++.-.+++-+++.++|+.|+++|++++++||....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999999888888774
No 166
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=57.45 E-value=15 Score=41.28 Aligned_cols=40 Identities=13% Similarity=0.115 Sum_probs=35.8
Q ss_pred cc-CChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 630 LQ-EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 630 lq-~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
+| |++++++++|+++|+++.+.|+-..+.+..+..+.||.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 35 89999999999999999999977777888899999994
No 167
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=57.35 E-value=30 Score=35.26 Aligned_cols=39 Identities=23% Similarity=0.279 Sum_probs=33.3
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
.-|++.+=++.++.+||++.+++--+..-+...+..+|+
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 456666777889999999999999999888888988887
No 168
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=57.09 E-value=16 Score=40.64 Aligned_cols=48 Identities=19% Similarity=0.236 Sum_probs=36.8
Q ss_pred EEeeeccc----ccCChHHHHHHHHHcCCeEEEEeCCcHhH---HHHHHHHcCcc
Q 001087 622 GCTAIEDK----LQEGVPACIETLARAGIKIWVLTGDKMET---AINIAYACNLI 669 (1159)
Q Consensus 622 G~~~ieD~----lq~~v~etI~~L~~aGIkvwmLTGD~~eT---Ai~Ia~~~gl~ 669 (1159)
|.+.-.+. +=+++.++|+.|+++|++++++||....+ ......++|+-
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44445555 78899999999999999999999977666 44445556763
No 169
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=57.06 E-value=15 Score=41.07 Aligned_cols=41 Identities=7% Similarity=0.125 Sum_probs=37.2
Q ss_pred cc-CChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccc
Q 001087 630 LQ-EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 670 (1159)
Q Consensus 630 lq-~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~ 670 (1159)
+| ||+.++++.|+++|+++.+.|+=..+.+...-.++||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 55 999999999999999999999888888888999999964
No 170
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=55.96 E-value=30 Score=35.88 Aligned_cols=37 Identities=11% Similarity=0.026 Sum_probs=30.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++-+|+.++++.|+ .+++++|+-....+..+-...|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl 120 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGI 120 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCc
Confidence 46789999999997 47999998887777777777776
No 171
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=55.66 E-value=1.8e+02 Score=31.08 Aligned_cols=23 Identities=9% Similarity=0.206 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhccC
Q 001087 995 YITVGGSILAWFLFVFLYTGIMT 1017 (1159)
Q Consensus 995 ~~~i~~si~~~~~~~~~~~~~~~ 1017 (1159)
....++.+++|++++.+...+|+
T Consensus 150 ~~~~~~~~~~w~~~~~~~~~lp~ 172 (206)
T PF06570_consen 150 ILISVLAMVLWIVIFVLTSFLPP 172 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHccc
Confidence 33444566666665555444543
No 172
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=55.27 E-value=14 Score=35.48 Aligned_cols=39 Identities=26% Similarity=0.526 Sum_probs=30.0
Q ss_pred ccCChHHHHHHHHHcCCe-EEEEeCCcHhHHHHHHHHcCc
Q 001087 630 LQEGVPACIETLARAGIK-IWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIk-vwmLTGD~~eTAi~Ia~~~gl 668 (1159)
..+.+++.++++.+.|++ +|+.+|...+.++..|++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 345789999999999996 999999999999999999887
No 173
>KOG4050 consensus Glutamate transporter EAAC1-interacting protein GTRAP3-18 [Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=54.29 E-value=84 Score=31.51 Aligned_cols=47 Identities=19% Similarity=0.237 Sum_probs=33.0
Q ss_pred hccceeeccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 816 MASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQF 862 (1159)
Q Consensus 816 ~asD~~i~~f~~l~~lll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~ 862 (1159)
.--||.+..+||...-.=.--||+-+-++.++.|.--+-++++....
T Consensus 21 a~ddF~lgS~Rfa~Pd~~D~~kW~nRVisNLLYyQTNYfv~~it~~~ 67 (188)
T KOG4050|consen 21 ALDDFLLGSDRFARPDFNDFKKWNNRVISNLLYYQTNYFVTFITLFL 67 (188)
T ss_pred hHHHhccCcccccCCCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 34588888888877665667889988888888887666555544433
No 174
>PTZ00445 p36-lilke protein; Provisional
Probab=46.36 E-value=31 Score=36.76 Aligned_cols=29 Identities=24% Similarity=0.149 Sum_probs=25.2
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHhH
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKMET 658 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~eT 658 (1159)
++++..+.++.|+++||+|.++|=-.+++
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 68888999999999999999999766554
No 175
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=45.56 E-value=53 Score=40.37 Aligned_cols=26 Identities=23% Similarity=0.455 Sum_probs=23.5
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
+-+||+++++.|+++|+++.++|.-.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~ 223 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQG 223 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCc
Confidence 46999999999999999999999843
No 176
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=45.43 E-value=4.2e+02 Score=35.35 Aligned_cols=42 Identities=24% Similarity=0.319 Sum_probs=36.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHhh
Q 001087 1034 STFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHR 1076 (1159)
Q Consensus 1034 ~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~~p~~~~~~~~~~~ 1076 (1159)
.++.+|..++++.++++++.++....+..|.|.+.. ++++..
T Consensus 852 ~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~-~~~~~~ 893 (917)
T COG0474 852 SNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLS-LFEWLI 893 (917)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCc-HHHHHH
Confidence 799999999999999999999988887888888888 665543
No 177
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=42.27 E-value=46 Score=35.05 Aligned_cols=48 Identities=25% Similarity=0.306 Sum_probs=43.1
Q ss_pred cEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHH
Q 001087 618 LTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 665 (1159)
Q Consensus 618 l~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~ 665 (1159)
+.+-|.+-+||-.-+|+.|+++.|+.++.||..+|.-+.+.-.+....
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~r 59 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHER 59 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHH
Confidence 356799999999999999999999999999999999988887777765
No 178
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=41.58 E-value=1.7e+02 Score=30.37 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=24.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 001087 988 NTITRFHYITVGGSILAWFLFVFLYTGIMTPND 1020 (1159)
Q Consensus 988 ~~~~~~~~~~i~~si~~~~~~~~~~~~~~~~~~ 1020 (1159)
+.|+|-......+|+++|++..+.-+++|+.++
T Consensus 158 r~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN 190 (226)
T COG4858 158 RPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLN 190 (226)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCC
Confidence 567777777888899999888776677776543
No 179
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=41.58 E-value=46 Score=36.31 Aligned_cols=28 Identities=11% Similarity=0.247 Sum_probs=22.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHh
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKME 657 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~e 657 (1159)
++-+|++++++.|++. +++.++|.-+.+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~ 140 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ 140 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence 4668999999999875 899999885543
No 180
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=40.71 E-value=71 Score=33.07 Aligned_cols=37 Identities=14% Similarity=-0.043 Sum_probs=30.6
Q ss_pred cCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 631 QEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 631 q~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++ .++++.|++. +++.++||.....+..+-.+.|+.
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 344 5899999865 899999999999998888888874
No 181
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=40.43 E-value=9.3 Score=41.51 Aligned_cols=13 Identities=15% Similarity=0.253 Sum_probs=0.0
Q ss_pred cchHHHHHHHHHH
Q 001087 1034 STFYFYFTLILVP 1046 (1159)
Q Consensus 1034 ~~~~~w~~~l~~~ 1046 (1159)
..-.||+++++..
T Consensus 167 L~dL~WL~LFlai 179 (381)
T PF05297_consen 167 LVDLYWLLLFLAI 179 (381)
T ss_dssp -------------
T ss_pred HHHHHHHHHHHHH
Confidence 3456787776543
No 182
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=38.77 E-value=38 Score=34.69 Aligned_cols=33 Identities=12% Similarity=0.063 Sum_probs=22.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++.+|+.++++ ++.++|.=.......+-...||
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l 122 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGL 122 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCC
Confidence 57899999998 3566676666655555555554
No 183
>PRK07668 hypothetical protein; Validated
Probab=38.57 E-value=5.9e+02 Score=28.22 Aligned_cols=28 Identities=11% Similarity=0.087 Sum_probs=12.6
Q ss_pred hhhhHHHhhhccccCCChhhhhcCchhh
Q 001087 888 FTSMPVIMLGLFEKDVSASLSKKYPQLY 915 (1159)
Q Consensus 888 ~t~lp~~~l~~~d~~~~~~~~~~~P~ly 915 (1159)
.+..+-+.-|-.+-...+++.-..|+-|
T Consensus 32 ~Ei~~hLlEgQk~GkTA~~IfG~sPk~y 59 (254)
T PRK07668 32 EDAELHLIEGEKDGKTVEDIFGDSPKEY 59 (254)
T ss_pred HHHHHHHHHHHHcCCcHHHHhCCCHHHH
Confidence 3445555555433333334444456544
No 184
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=38.57 E-value=6.2e+02 Score=33.71 Aligned_cols=67 Identities=12% Similarity=0.193 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHhhccceEEEeeCCeEEEeeccCcc---cceEEEEccCCccCceEEEEeec
Q 001087 43 LSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQ---VGDIVMVKQDGFFPADLLFLAST 113 (1159)
Q Consensus 43 l~~vl~vs~ik~~~ed~~r~~~d~~~n~~~~~V~r~g~~~~i~~~~l~---vGDIV~v~~ge~iPAD~~lL~ss 113 (1159)
-++++++..+...++.++.+|+.+.+..-+-. ... + ..+- ++-. -|....|...|.+|-|+++++.-
T Consensus 125 a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l-~~~-~-a~Vi-R~g~~~~~g~~~~I~~~eLvpGDiV~l~~G 194 (902)
T PRK10517 125 AGVIALMVAISTLLNFIQEARSTKAADALKAM-VSN-T-ATVL-RVINDKGENGWLEIPIDQLVPGDIIKLAAG 194 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCC-e-EEEE-ECCccCCCCeEEEEEHHhCCCCCEEEECCC
Confidence 34455667777888888888888887653221 111 1 1111 1111 15688899999999999999754
No 185
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=36.70 E-value=65 Score=36.14 Aligned_cols=50 Identities=18% Similarity=0.269 Sum_probs=36.4
Q ss_pred EEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHH---HHHHcCcccc
Q 001087 622 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAIN---IAYACNLINN 671 (1159)
Q Consensus 622 G~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~---Ia~~~gl~~~ 671 (1159)
|++.-.+++=+|+.++|+.|++.|++++++||....+... --++.|+...
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~ 63 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL 63 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 4444567788899999999999999999999965433332 3355777544
No 186
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=36.12 E-value=6.6e+02 Score=28.07 Aligned_cols=46 Identities=17% Similarity=0.190 Sum_probs=38.9
Q ss_pred CCceEEEecChhhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcc
Q 001087 756 CSSVVCCRVSPLQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAH 801 (1159)
Q Consensus 756 ~~~vI~~R~sP~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~Ad 801 (1159)
-|.+|-||.+-.-|+..++.+.++.+ ..++..||-.-|-.|+...+
T Consensus 170 gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 170 GKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred CceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 36789999998899999997755554 35899999999999999988
No 187
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=36.00 E-value=95 Score=30.00 Aligned_cols=80 Identities=19% Similarity=0.270 Sum_probs=57.1
Q ss_pred HHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHc
Q 001087 565 QFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARA 644 (1159)
Q Consensus 565 ~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~a 644 (1159)
-+...|++|+.++.. .+.++..+ ...+.+-.++++.+......+.+++.++.|+++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~~-----------------------~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIVE-----------------------AAIQEDVDVIGLSSLSGGHMTLFPEVIELLREL 77 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH-----------------------HHHHcCCCEEEEcccchhhHHHHHHHHHHHHhc
Confidence 467899999998865 55444322 222467788888888889999999999999999
Q ss_pred CC-eE-EEEeCCcHhHHHHHHHHcCc
Q 001087 645 GI-KI-WVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 645 GI-kv-wmLTGD~~eTAi~Ia~~~gl 668 (1159)
|. ++ +++=|-...--.+-.++.|+
T Consensus 78 ~~~~i~i~~GG~~~~~~~~~~~~~G~ 103 (122)
T cd02071 78 GAGDILVVGGGIIPPEDYELLKEMGV 103 (122)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHCCC
Confidence 77 43 55556554433555667885
No 188
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=35.74 E-value=93 Score=33.58 Aligned_cols=43 Identities=23% Similarity=0.230 Sum_probs=38.1
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 670 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~ 670 (1159)
.++.+|+.++++.|+..||++.+.|+=....+..+....||..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~ 127 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD 127 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh
Confidence 4788999999999999999999999988888888888888864
No 189
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=35.47 E-value=1.1e+02 Score=33.29 Aligned_cols=29 Identities=17% Similarity=0.264 Sum_probs=25.5
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKM 656 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~ 656 (1159)
++.=+++.+.++.+++.|++|..+||-..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~ 142 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPE 142 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEET
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCc
Confidence 46668999999999999999999999654
No 190
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=35.04 E-value=7.8e+02 Score=33.19 Aligned_cols=124 Identities=11% Similarity=0.045 Sum_probs=66.8
Q ss_pred eCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEE-EeccCCCCCCcceeeeccccccccCChhhhcccce
Q 001087 77 QGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCY-IETANLDGETNLKIRKALERTWDYLTPEKASEFKG 155 (1159)
Q Consensus 77 r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~-Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g 155 (1159)
.-|..+.+...|..|.|.+.++.+. +.++.|...|... |+-..-+.+.. +.+
T Consensus 160 v~GDiv~l~~Gd~IPaD~~il~~~~------l~VdeS~LTGES~pv~K~~~~~~~~-----~~~---------------- 212 (997)
T TIGR01106 160 VVGDLVEVKGGDRIPADLRIISAQG------CKVDNSSLTGESEPQTRSPEFTHEN-----PLE---------------- 212 (997)
T ss_pred CCCCEEEECCCCEEeeeEEEEEccC------cEEEccccCCCCCceeccCCCcccC-----ccc----------------
Confidence 4578889999999999999888652 2234443333221 22111110111 111
Q ss_pred EEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccCCCCC-CcCHHHHHHHHH
Q 001087 156 EVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPS-KRSTLERKLDKL 234 (1159)
Q Consensus 156 ~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~~~~~-k~s~l~~~~n~~ 234 (1159)
.....|+||.+++|.. .| .+. ..|-=++.|.-.+++......+. -...+++..+.+
T Consensus 213 --------~~n~l~~Gt~v~~G~~----------~~-~V~----~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~ 269 (997)
T TIGR01106 213 --------TRNIAFFSTNCVEGTA----------RG-IVV----NTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHII 269 (997)
T ss_pred --------cCCeEEeccEeeeeeE----------EE-EEE----EccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHH
Confidence 0114688888888751 11 111 23444566766666555443322 246778888887
Q ss_pred HHHHHHHHHHHHHHHH
Q 001087 235 ILALFATLTVMCLICA 250 (1159)
Q Consensus 235 ~~~l~~~~~~l~~i~~ 250 (1159)
+.+.+++.+++.++..
T Consensus 270 ~~~~~~~~~~~~~~~~ 285 (997)
T TIGR01106 270 TGVAVFLGVSFFILSL 285 (997)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7776665555554443
No 191
>PRK10444 UMP phosphatase; Provisional
Probab=35.02 E-value=3.2e+02 Score=30.09 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=29.0
Q ss_pred cCcEEEEecCCc-cCHHHHHhcccce-ee-cCccchhhh----hccceeecc
Q 001087 780 ARKITLSIGDGA-NDVSMIQAAHIGV-GI-SGQEGMQAV----MASDFAIAQ 824 (1159)
Q Consensus 780 ~g~~vl~iGDG~-NDv~mL~~AdVGI-gi-sg~e~~qA~----~asD~~i~~ 824 (1159)
....++||||.. +|..+=++|.+-- ++ +|....+.. ...|+++.+
T Consensus 190 ~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~s 241 (248)
T PRK10444 190 HSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPS 241 (248)
T ss_pred CcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECC
Confidence 347799999997 8998888887765 34 554332222 235666654
No 192
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=34.13 E-value=1.5e+02 Score=40.08 Aligned_cols=21 Identities=33% Similarity=0.267 Sum_probs=16.4
Q ss_pred CCeEEEee--ccCcccceEEEEc
Q 001087 78 GQRWVSIP--WRKLQVGDIVMVK 98 (1159)
Q Consensus 78 ~g~~~~i~--~~~l~vGDIV~v~ 98 (1159)
-|..+.++ ..+..|.|.+.++
T Consensus 249 pGDiv~l~~~~g~~iPaD~~ll~ 271 (1054)
T TIGR01657 249 PGDIVSIPRPEEKTMPCDSVLLS 271 (1054)
T ss_pred CCCEEEEecCCCCEecceEEEEe
Confidence 46777777 7888888888885
No 193
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=33.95 E-value=1e+02 Score=35.10 Aligned_cols=17 Identities=18% Similarity=0.194 Sum_probs=12.4
Q ss_pred HhhCCChHHHHHHHhhc
Q 001087 1061 RWFSPYDYQIVQEMHRH 1077 (1159)
Q Consensus 1061 ~~~~p~~~~~~~~~~~~ 1077 (1159)
-|+||+...-+.=++.+
T Consensus 256 ~W~FPNL~eDvGfleSF 272 (372)
T KOG2927|consen 256 FWLFPNLTEDVGFLESF 272 (372)
T ss_pred eEeccchhhhhhHHHhh
Confidence 36789988777766665
No 194
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=33.28 E-value=1.2e+02 Score=34.41 Aligned_cols=36 Identities=22% Similarity=0.367 Sum_probs=25.3
Q ss_pred ChHHHHHHHHHcCCeEEEEeCCcHhHHHHHH-HHcCc
Q 001087 633 GVPACIETLARAGIKIWVLTGDKMETAINIA-YACNL 668 (1159)
Q Consensus 633 ~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia-~~~gl 668 (1159)
|+...=..|+..|.+++++|.+.-..+..-+ +.+++
T Consensus 64 GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 64 GAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred HHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 4455567888899999999988766655443 34444
No 195
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=33.20 E-value=1e+02 Score=30.45 Aligned_cols=80 Identities=11% Similarity=0.159 Sum_probs=55.8
Q ss_pred HHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHc
Q 001087 565 QFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARA 644 (1159)
Q Consensus 565 ~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~a 644 (1159)
-+...|++|+.++... +.+++-+ .-.|.+-..+|+.++-=.--+..+++++.|+++
T Consensus 24 ~l~~~GfeVi~LG~~v-~~e~~v~-----------------------aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~ 79 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLS-PQEEFIK-----------------------AAIETKADAILVSSLYGHGEIDCKGLRQKCDEA 79 (134)
T ss_pred HHHHCCCEEEECCCCC-CHHHHHH-----------------------HHHHcCCCEEEEecccccCHHHHHHHHHHHHHC
Confidence 3567899999998644 3333211 224568889999988877777899999999999
Q ss_pred CC--eEEEEeCC------cHhHHHHHHHHcCc
Q 001087 645 GI--KIWVLTGD------KMETAINIAYACNL 668 (1159)
Q Consensus 645 GI--kvwmLTGD------~~eTAi~Ia~~~gl 668 (1159)
|+ .+||+-|- ..+.-..-++++|.
T Consensus 80 gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 80 GLEGILLYVGGNLVVGKQDFPDVEKRFKEMGF 111 (134)
T ss_pred CCCCCEEEecCCcCcChhhhHHHHHHHHHcCC
Confidence 97 46778773 12222445778884
No 196
>PRK11507 ribosome-associated protein; Provisional
Probab=32.77 E-value=43 Score=29.05 Aligned_cols=26 Identities=15% Similarity=0.033 Sum_probs=22.9
Q ss_pred EEeeCCeEEEeeccCcccceEEEEcc
Q 001087 74 EVLQGQRWVSIPWRKLQVGDIVMVKQ 99 (1159)
Q Consensus 74 ~V~r~g~~~~i~~~~l~vGDIV~v~~ 99 (1159)
.|..||+.+...-+.|++||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 56778999999999999999999865
No 197
>PF13253 DUF4044: Protein of unknown function (DUF4044)
Probab=31.65 E-value=1.5e+02 Score=22.10 Aligned_cols=21 Identities=19% Similarity=0.243 Sum_probs=13.8
Q ss_pred CCCCcCHHHHHHHHHHHHHHH
Q 001087 220 IPSKRSTLERKLDKLILALFA 240 (1159)
Q Consensus 220 ~~~k~s~l~~~~n~~~~~l~~ 240 (1159)
.+.|+|.+|+...-++.++.+
T Consensus 2 ~kkkKS~fekiT~v~v~lM~i 22 (35)
T PF13253_consen 2 KKKKKSTFEKITMVVVWLMLI 22 (35)
T ss_pred CCccccHHHHHHHHHHHHHHH
Confidence 356789999877655544433
No 198
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=31.38 E-value=25 Score=30.04 Aligned_cols=24 Identities=25% Similarity=0.256 Sum_probs=13.5
Q ss_pred EeeCCeEEEeeccCcccceEEEEc
Q 001087 75 VLQGQRWVSIPWRKLQVGDIVMVK 98 (1159)
Q Consensus 75 V~r~g~~~~i~~~~l~vGDIV~v~ 98 (1159)
|..||+.+.-+-+.|++||+|.+.
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~~ 58 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEID 58 (65)
T ss_dssp HEETTB----SS----SSEEEEET
T ss_pred eEECCEEccccCCcCCCCCEEEEC
Confidence 566888888899999999999993
No 199
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=31.32 E-value=98 Score=34.30 Aligned_cols=48 Identities=17% Similarity=0.233 Sum_probs=29.3
Q ss_pred CcEEEEecCCc-cCHHHHHhcccce-ee-cCccc----hhhhhccceeecccccc
Q 001087 781 RKITLSIGDGA-NDVSMIQAAHIGV-GI-SGQEG----MQAVMASDFAIAQFRFL 828 (1159)
Q Consensus 781 g~~vl~iGDG~-NDv~mL~~AdVGI-gi-sg~e~----~qA~~asD~~i~~f~~l 828 (1159)
...++||||.. +|+.+=+.|.+-- ++ .|... ......+|+++.++.-+
T Consensus 196 ~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el 250 (257)
T TIGR01458 196 PEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHA 250 (257)
T ss_pred hhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHH
Confidence 46799999996 8998877776543 44 44311 01123467777655433
No 200
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=29.37 E-value=61 Score=34.71 Aligned_cols=65 Identities=22% Similarity=0.285 Sum_probs=48.7
Q ss_pred HHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHc
Q 001087 565 QFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARA 644 (1159)
Q Consensus 565 ~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~a 644 (1159)
-+...|++++=++ ++.+.++|-+- -.|.+-.+++..++--.--.+.++.|+.|+++
T Consensus 127 ml~~aGfevidLG-~dvP~e~fve~-----------------------a~e~k~d~v~~SalMTttm~~~~~viE~L~ee 182 (227)
T COG5012 127 MLEAAGFEVIDLG-RDVPVEEFVEK-----------------------AKELKPDLVSMSALMTTTMIGMKDVIELLKEE 182 (227)
T ss_pred HHHhCCcEEEecC-CCCCHHHHHHH-----------------------HHHcCCcEEechHHHHHHHHHHHHHHHHHHHc
Confidence 3456799999998 56666655331 12455678899988888888899999999999
Q ss_pred CCeEEEEeC
Q 001087 645 GIKIWVLTG 653 (1159)
Q Consensus 645 GIkvwmLTG 653 (1159)
|||--+++|
T Consensus 183 GiRd~v~v~ 191 (227)
T COG5012 183 GIRDKVIVM 191 (227)
T ss_pred CCccCeEEe
Confidence 998655555
No 201
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=27.66 E-value=70 Score=35.66 Aligned_cols=45 Identities=18% Similarity=0.192 Sum_probs=39.5
Q ss_pred EEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHH
Q 001087 621 IGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 665 (1159)
Q Consensus 621 lG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~ 665 (1159)
=|++.--+++=||+.++|+.|+++|++++.||--...+....+.+
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 478888889999999999999999999999999998888855544
No 202
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=27.51 E-value=4.8e+02 Score=34.61 Aligned_cols=21 Identities=14% Similarity=0.145 Sum_probs=12.0
Q ss_pred CeEEEeeccCcccceEEEEcc
Q 001087 79 QRWVSIPWRKLQVGDIVMVKQ 99 (1159)
Q Consensus 79 g~~~~i~~~~l~vGDIV~v~~ 99 (1159)
|..+.+...|..|-|.+.++.
T Consensus 138 GDiv~l~~Gd~IPaDg~ii~g 158 (884)
T TIGR01522 138 GDLVCLSVGDRVPADLRIVEA 158 (884)
T ss_pred CCEEEecCCCEEeeeEEEEEc
Confidence 455555556666666555553
No 203
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=27.06 E-value=1.3e+02 Score=28.71 Aligned_cols=80 Identities=19% Similarity=0.276 Sum_probs=56.0
Q ss_pred HHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHc
Q 001087 565 QFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARA 644 (1159)
Q Consensus 565 ~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~a 644 (1159)
-+...|++|+.+.. .++.++..+. ..+.+-.++|+....+.--+.+++.++.+++.
T Consensus 22 ~l~~~G~~V~~lg~-~~~~~~l~~~-----------------------~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~ 77 (119)
T cd02067 22 ALRDAGFEVIDLGV-DVPPEEIVEA-----------------------AKEEDADAIGLSGLLTTHMTLMKEVIEELKEA 77 (119)
T ss_pred HHHHCCCEEEECCC-CCCHHHHHHH-----------------------HHHcCCCEEEEeccccccHHHHHHHHHHHHHc
Confidence 45679999988873 4666554331 23567789999998788889999999999999
Q ss_pred CC-eE-EEEeCCcHhHHHHHHHHcCc
Q 001087 645 GI-KI-WVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 645 GI-kv-wmLTGD~~eTAi~Ia~~~gl 668 (1159)
+- ++ +++-|-.....-..+++.|.
T Consensus 78 ~~~~~~i~vGG~~~~~~~~~~~~~G~ 103 (119)
T cd02067 78 GLDDIPVLVGGAIVTRDFKFLKEIGV 103 (119)
T ss_pred CCCCCeEEEECCCCChhHHHHHHcCC
Confidence 76 54 56666443322446777775
No 204
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=26.89 E-value=35 Score=30.61 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=18.1
Q ss_pred eeccCcccceEEEE-ccCCccCceEEEE
Q 001087 84 IPWRKLQVGDIVMV-KQDGFFPADLLFL 110 (1159)
Q Consensus 84 i~~~~l~vGDIV~v-~~ge~iPAD~~lL 110 (1159)
+.-.+|.+||.|.| +.||.||-=.-++
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~I~~vv 72 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPKIVGVV 72 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEEEEEE-
T ss_pred HHHcCCCCCCEEEEEECCCccceEeEee
Confidence 34579999999998 6799999644333
No 205
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=26.79 E-value=33 Score=35.66 Aligned_cols=14 Identities=36% Similarity=0.323 Sum_probs=12.7
Q ss_pred EEecCCCCCCCCce
Q 001087 354 IFSDKTGTLTRNLM 367 (1159)
Q Consensus 354 I~sDKTGTLT~n~m 367 (1159)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999984
No 206
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=26.76 E-value=2.3e+02 Score=30.22 Aligned_cols=40 Identities=13% Similarity=0.066 Sum_probs=30.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++-+++.++++.|+.. .+++++|--....+.....++||.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~ 138 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLL 138 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCCh
Confidence 4556777777777777 789999987777777777888853
No 207
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=26.68 E-value=60 Score=30.19 Aligned_cols=29 Identities=21% Similarity=0.294 Sum_probs=22.6
Q ss_pred EEeeCCeEEEeeccCcccceEEEEccCCcc
Q 001087 74 EVLQGQRWVSIPWRKLQVGDIVMVKQDGFF 103 (1159)
Q Consensus 74 ~V~r~g~~~~i~~~~l~vGDIV~v~~ge~i 103 (1159)
+|.-||+.. .+++++++||+|.|.-|...
T Consensus 35 rV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 35 RVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred eEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 344466655 79999999999999888653
No 208
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=26.53 E-value=99 Score=31.45 Aligned_cols=45 Identities=16% Similarity=0.003 Sum_probs=38.8
Q ss_pred eeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 624 TAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 624 ~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
....=++|||+.+.++.|++. +++.+.|.=.++.|..+...++.-
T Consensus 53 ~~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 53 MWYLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred eEEEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 344556899999999999955 999999999999999999888764
No 209
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=26.41 E-value=1.1e+02 Score=30.27 Aligned_cols=65 Identities=17% Similarity=0.216 Sum_probs=47.6
Q ss_pred HHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHc
Q 001087 565 QFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARA 644 (1159)
Q Consensus 565 ~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~a 644 (1159)
-+...|++|+.++.. ++.+++.+ .-.+.+-.++|+....-...+.+++.++.|++.
T Consensus 26 ~lr~~G~eVi~LG~~-vp~e~i~~-----------------------~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 26 ALTEAGFEVINLGVM-TSQEEFID-----------------------AAIETDADAILVSSLYGHGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH-----------------------HHHHcCCCEEEEcCccccCHHHHHHHHHHHHhc
Confidence 456799999999864 44444322 223568889999999999999999999999999
Q ss_pred CC-e-EEEEeC
Q 001087 645 GI-K-IWVLTG 653 (1159)
Q Consensus 645 GI-k-vwmLTG 653 (1159)
|. . .|++-|
T Consensus 82 ~~~~~~i~vGG 92 (137)
T PRK02261 82 GLGDILLYVGG 92 (137)
T ss_pred CCCCCeEEEEC
Confidence 55 2 355555
No 210
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=25.98 E-value=1.7e+02 Score=24.36 Aligned_cols=39 Identities=28% Similarity=0.290 Sum_probs=28.8
Q ss_pred hhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 213 VMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAI 251 (1159)
Q Consensus 213 ~~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i 251 (1159)
.+.|.-..+.+++.+.+.++.+...+..++++.++++++
T Consensus 23 ~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 23 YGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 456666666678899999998888777777777766654
No 211
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=24.51 E-value=4.3e+02 Score=25.20 Aligned_cols=26 Identities=15% Similarity=0.174 Sum_probs=22.4
Q ss_pred CChHHHHHHHHHcCCeEEEEeCCcHh
Q 001087 632 EGVPACIETLARAGIKIWVLTGDKME 657 (1159)
Q Consensus 632 ~~v~etI~~L~~aGIkvwmLTGD~~e 657 (1159)
+++.+.++.+++.|++++.+|++...
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~ 99 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANS 99 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCC
Confidence 45788899999999999999998654
No 212
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=24.38 E-value=1.5e+02 Score=39.55 Aligned_cols=97 Identities=11% Similarity=0.226 Sum_probs=56.6
Q ss_pred cHHHhh---hhhhHHHHHHHHHHhhccccccccc----------chhhhHHH--HHHHHHHHHHHHHHHHhhhhHhhccc
Q 001087 7 QKGCLN---RRVANCYFLMISILSTTPMSPVNPV----------TNVVPLSL--VLLVSLIKEAWEDWKRFQNDMTINST 71 (1159)
Q Consensus 7 pk~L~~---~~~~n~yfl~i~il~~i~~s~~~~~----------~~~~pl~~--vl~vs~ik~~~ed~~r~~~d~~~n~~ 71 (1159)
|+++|+ +.+.+.+.+++.+...+.+--.... ...-.+++ ++++..+..++++++..++.++++..
T Consensus 83 ~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~ 162 (941)
T TIGR01517 83 PKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNRE 162 (941)
T ss_pred CCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhc
Confidence 344554 7777777666655555433111000 11222322 23344566888888888887777632
Q ss_pred eEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEee
Q 001087 72 PVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLAS 112 (1159)
Q Consensus 72 ~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~s 112 (1159)
.......+ ++-|-...+...|.+|-|++++..
T Consensus 163 -----~~~~~~~V----iRdG~~~~I~~~~Lv~GDiV~l~~ 194 (941)
T TIGR01517 163 -----KSAQKIAV----IRGGQEQQISIHDIVVGDIVSLST 194 (941)
T ss_pred -----cCCCceEE----EECCEEEEEeHHHCCCCCEEEECC
Confidence 11212222 345888999999999999999964
No 213
>PRK08508 biotin synthase; Provisional
Probab=24.31 E-value=4.3e+02 Score=29.61 Aligned_cols=45 Identities=20% Similarity=0.068 Sum_probs=29.6
Q ss_pred hHHHHHHHHHcCCe-EE------------EEeCCcHhH---HHHHHHHcCccccCceEEEE
Q 001087 634 VPACIETLARAGIK-IW------------VLTGDKMET---AINIAYACNLINNEMKQFII 678 (1159)
Q Consensus 634 v~etI~~L~~aGIk-vw------------mLTGD~~eT---Ai~Ia~~~gl~~~~~~~i~i 678 (1159)
.++.++.|++||+. +- +.||...+- ++..|+++|+-....-++.+
T Consensus 101 ~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~sg~I~Gl 161 (279)
T PRK08508 101 SVEQLKELKKAGIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGLCSGGIFGL 161 (279)
T ss_pred CHHHHHHHHHcCCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCeecceeEEec
Confidence 48999999999993 33 456765555 45568889974443333333
No 214
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=24.23 E-value=59 Score=31.81 Aligned_cols=33 Identities=15% Similarity=0.051 Sum_probs=28.3
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAI 660 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi 660 (1159)
+++.+++.++++.|++.|+++.+.||-......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 567788899999999999999999998776654
No 215
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=24.11 E-value=2e+02 Score=28.36 Aligned_cols=81 Identities=17% Similarity=0.235 Sum_probs=57.6
Q ss_pred HHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHH
Q 001087 564 EQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLAR 643 (1159)
Q Consensus 564 ~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~ 643 (1159)
..+...|+.|+-.... .+.+++-+ .-.|.+-..+|+.++-..--+.++++++.|++
T Consensus 24 ~~l~~~GfeVi~lg~~-~s~e~~v~-----------------------aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~ 79 (132)
T TIGR00640 24 TAYADLGFDVDVGPLF-QTPEEIAR-----------------------QAVEADVHVVGVSSLAGGHLTLVPALRKELDK 79 (132)
T ss_pred HHHHhCCcEEEECCCC-CCHHHHHH-----------------------HHHHcCCCEEEEcCchhhhHHHHHHHHHHHHh
Confidence 3467899999988754 34444322 23467889999999999999999999999999
Q ss_pred cCC-eE-EEEeCCcHhHHHHHHHHcCc
Q 001087 644 AGI-KI-WVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 644 aGI-kv-wmLTGD~~eTAi~Ia~~~gl 668 (1159)
+|. ++ +|+=|-.+..-..--+++|+
T Consensus 80 ~g~~~i~vivGG~~~~~~~~~l~~~Gv 106 (132)
T TIGR00640 80 LGRPDILVVVGGVIPPQDFDELKEMGV 106 (132)
T ss_pred cCCCCCEEEEeCCCChHhHHHHHHCCC
Confidence 987 44 45544444333445677787
No 216
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=23.65 E-value=1.1e+02 Score=27.76 Aligned_cols=9 Identities=33% Similarity=0.881 Sum_probs=3.9
Q ss_pred hhhhHHHHH
Q 001087 39 NVVPLSLVL 47 (1159)
Q Consensus 39 ~~~pl~~vl 47 (1159)
+++|+++++
T Consensus 5 ~l~~~vv~~ 13 (84)
T TIGR00739 5 TLLPLVLIF 13 (84)
T ss_pred HHHHHHHHH
Confidence 344444433
No 217
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=23.63 E-value=1.6e+02 Score=25.48 Aligned_cols=46 Identities=20% Similarity=0.344 Sum_probs=31.8
Q ss_pred CcEEEEecCC-ccCHHHHHhcccce-ee-cCccchh----hhhccceeecccc
Q 001087 781 RKITLSIGDG-ANDVSMIQAAHIGV-GI-SGQEGMQ----AVMASDFAIAQFR 826 (1159)
Q Consensus 781 g~~vl~iGDG-~NDv~mL~~AdVGI-gi-sg~e~~q----A~~asD~~i~~f~ 826 (1159)
...++||||. ..|+.+=+++++-- ++ +|..... +...+|+++.++.
T Consensus 21 ~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~ 73 (75)
T PF13242_consen 21 PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLK 73 (75)
T ss_dssp GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGG
T ss_pred HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHH
Confidence 4679999999 99999999887754 44 4432221 1247888887643
No 218
>PF14985 TM140: TM140 protein family
Probab=23.48 E-value=4e+02 Score=26.72 Aligned_cols=43 Identities=28% Similarity=0.420 Sum_probs=26.9
Q ss_pred hccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHH
Q 001087 897 GLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYN 945 (1159)
Q Consensus 897 ~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~ 945 (1159)
...++|.+.-.+.++|++=..|....-+- -.-.|+|-++++-.
T Consensus 49 CLWne~~~~LqC~qfpeLealGvp~vgLa------LARlgVYgalVltl 91 (181)
T PF14985_consen 49 CLWNEDTGSLQCHQFPELEALGVPRVGLA------LARLGVYGALVLTL 91 (181)
T ss_pred eeecCCcCccccccCchHHHcCCcHHHHH------HHHHhhHHHHHHHH
Confidence 35688888888899999876664322111 12237777776543
No 219
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=22.68 E-value=1.2e+02 Score=24.88 Aligned_cols=38 Identities=16% Similarity=0.296 Sum_probs=28.9
Q ss_pred hccceEEEe-eCCeEEEeecc-CcccceEEEEccCCccCc
Q 001087 68 INSTPVEVL-QGQRWVSIPWR-KLQVGDIVMVKQDGFFPA 105 (1159)
Q Consensus 68 ~n~~~~~V~-r~g~~~~i~~~-~l~vGDIV~v~~ge~iPA 105 (1159)
+....+.|+ .+|+|.+++-. +..+||.|.+.+.+..+.
T Consensus 3 i~~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~~~~ 42 (56)
T PF12791_consen 3 IKKKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDIINK 42 (56)
T ss_pred CcCCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhhccc
Confidence 345566666 57899988754 799999999998887654
No 220
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=22.25 E-value=1.7e+02 Score=32.63 Aligned_cols=47 Identities=19% Similarity=0.190 Sum_probs=33.9
Q ss_pred cCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCcc--CHHHHHhccc
Q 001087 755 NCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAN--DVSMIQAAHI 802 (1159)
Q Consensus 755 ~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~N--Dv~mL~~AdV 802 (1159)
.++.||.|--++..|..+.+.. +..+..+..+|+..| |...++-+|+
T Consensus 121 ~~D~VIdaiD~~~~k~~L~~~c-~~~~ip~I~~gGag~k~dp~~~~~~di 169 (268)
T PRK15116 121 GFSYVIDAIDSVRPKAALIAYC-RRNKIPLVTTGGAGGQIDPTQIQVVDL 169 (268)
T ss_pred CCCEEEEcCCCHHHHHHHHHHH-HHcCCCEEEECCcccCCCCCeEEEEee
Confidence 4678899988999999999999 456667777777655 4444444443
No 221
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=22.21 E-value=7.1e+02 Score=30.87 Aligned_cols=23 Identities=13% Similarity=-0.117 Sum_probs=20.3
Q ss_pred eCCeEEEeeccCcccceEEEEcc
Q 001087 77 QGQRWVSIPWRKLQVGDIVMVKQ 99 (1159)
Q Consensus 77 r~g~~~~i~~~~l~vGDIV~v~~ 99 (1159)
.-|....++..+..|.|-+.++.
T Consensus 74 ~~GDiv~v~~G~~iP~Dg~ii~g 96 (536)
T TIGR01512 74 KVGDVVVVKPGERVPVDGVVLSG 96 (536)
T ss_pred CCCCEEEEcCCCEeecceEEEeC
Confidence 46889999999999999999984
No 222
>PF12148 DUF3590: Protein of unknown function (DUF3590); InterPro: IPR021991 This domain is found in eukaryotes, and is typically between 83 and 97 amino acids in length. It is found in association with PF00097 from PFAM, PF02182 from PFAM, PF00628 from PFAM, PF00240 from PFAM. There are two conserved sequence motifs: RAR and NYN. The domain is part of the protein NIRF which has zinc finger and ubiquitinating domains. The function of this domain is likely to be mainly structural, however this has not been confirmed. ; PDB: 3DB4_A 3ASK_A 3DB3_A 2L3R_A.
Probab=22.00 E-value=41 Score=30.25 Aligned_cols=25 Identities=32% Similarity=0.549 Sum_probs=14.0
Q ss_pred eEEEeeccCcccceEEEEccCCccC
Q 001087 80 RWVSIPWRKLQVGDIVMVKQDGFFP 104 (1159)
Q Consensus 80 ~~~~i~~~~l~vGDIV~v~~ge~iP 104 (1159)
.-..++|.+|.||++|.|.-+-.-|
T Consensus 57 ARt~l~w~~L~VG~~VMvNYN~d~P 81 (85)
T PF12148_consen 57 ARTILKWDELKVGQVVMVNYNVDEP 81 (85)
T ss_dssp --SBE-GGG--TT-EEEEEE-TTST
T ss_pred eeEeccHHhCCcccEEEEecCCCCc
Confidence 4456899999999999997664433
No 223
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli. It has now been characterised as 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, which converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4CPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate in the sixth step of nonmevalonate terpenoid biosynthesis. The family is largely restricted to bacteria, where it is widely but not universally distributed. No homology can be detected between this family and other proteins.; GO: 0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 0016114 terpenoid biosynthetic process, 0055114 oxidation-reduction process; PDB: 2Y0F_C 3NOY_A.
Probab=21.59 E-value=1.3e+03 Score=26.82 Aligned_cols=118 Identities=21% Similarity=0.233 Sum_probs=65.3
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEE
Q 001087 543 VIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIG 622 (1159)
Q Consensus 543 ~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG 622 (1159)
.++++..+..+...+...++++-+-+.|+.-++++.|.-+....-+- |. ..++.+..-| -+|
T Consensus 146 ~~~~ky~~t~~amvesA~~~~~~le~~~f~~iviSlKsSdv~~~i~a---yr--------------~la~~~dyPL-HLG 207 (359)
T PF04551_consen 146 DILEKYGPTPEAMVESALEHVRILEELGFDDIVISLKSSDVPETIEA---YR--------------LLAERMDYPL-HLG 207 (359)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHCT-GGEEEEEEBSSHHHHHHH---HH--------------HHHHH--S-E-EEE
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChHHHHHH---HH--------------HHHHhcCCCe-EEe
Confidence 34444322223456667788999999999999999998765442221 11 1222333333 457
Q ss_pred EeeecccccCCh--HHHHHHHHHcCC--eEEE-EeCCcH---hHHHHHHHHcCccccCceEEEE
Q 001087 623 CTAIEDKLQEGV--PACIETLARAGI--KIWV-LTGDKM---ETAINIAYACNLINNEMKQFII 678 (1159)
Q Consensus 623 ~~~ieD~lq~~v--~etI~~L~~aGI--kvwm-LTGD~~---eTAi~Ia~~~gl~~~~~~~i~i 678 (1159)
+|---....--+ .-.|-.|-..|| .+++ ||+|.. .+|.+|-+++||-....+.+.+
T Consensus 208 vTEAG~~~~g~IkSsigiG~LL~~GIGDTIRVSLt~~p~~EV~va~~IL~al~lR~~g~~~ISC 271 (359)
T PF04551_consen 208 VTEAGTGEDGTIKSSIGIGALLLDGIGDTIRVSLTGDPVEEVKVAFEILQALGLRKRGPEIISC 271 (359)
T ss_dssp BSSEESCHHHHHHHHHHHHHHHHTT--SEEEE-ECSSCCCHHHHHHHHHHHTTSS-SS-EEEE-
T ss_pred ecCCCCcccchhHHHHHHHHHHHcCCCCEEEEECCCCchHHHHHHHHHHHHhCcCcCCceeeeC
Confidence 775332222222 234566777888 3544 788864 4678888889996655554443
No 224
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=20.90 E-value=1.6e+02 Score=28.50 Aligned_cols=84 Identities=14% Similarity=0.212 Sum_probs=56.4
Q ss_pred CceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEE
Q 001087 456 ERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVL 535 (1159)
Q Consensus 456 ~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l 535 (1159)
..+.|+++=..+..|+++|.- ..|+.+.+..-++..+.-+.++..+.|.-.+
T Consensus 18 a~L~Y~GSItID~~Lm~aagi----------------------------~p~E~V~V~Nv~NG~Rf~TYvI~G~~GSg~I 69 (126)
T TIGR00223 18 ANLNYEGSITIDEDLLDAAGI----------------------------LENEKVDIVNVNNGKRFSTYAIAGKRGSRII 69 (126)
T ss_pred cccccceeEEECHHHHHhcCC----------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEE
Confidence 456788777778888887632 2344445555555556666666666555556
Q ss_pred EEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHH
Q 001087 536 YCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERW 589 (1159)
Q Consensus 536 ~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~ 589 (1159)
..-||. ..+++.|=|++.+||-.++++|...|
T Consensus 70 ~lNGAA----------------------Arl~~~GD~VII~sy~~~~~~e~~~~ 101 (126)
T TIGR00223 70 CVNGAA----------------------ARCVSVGDIVIIASYVTMPDEEARTH 101 (126)
T ss_pred EeCCHH----------------------HhcCCCCCEEEEEECCcCCHHHHhcC
Confidence 666773 23466788999999999999886554
No 225
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=20.24 E-value=1.8e+02 Score=28.28 Aligned_cols=84 Identities=17% Similarity=0.220 Sum_probs=56.6
Q ss_pred CceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEE
Q 001087 456 ERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVL 535 (1159)
Q Consensus 456 ~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l 535 (1159)
..+.|+++=..+..|+++|.- ..|+.+.+..-++..+..+.++..+.|.-.+
T Consensus 18 a~L~Y~GSitID~~Ll~aagi----------------------------~p~E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I 69 (126)
T PRK05449 18 ADLNYEGSITIDEDLLDAAGI----------------------------LENEKVQIVNVNNGARFETYVIAGERGSGVI 69 (126)
T ss_pred cccccceeEEECHHHHHhcCC----------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEE
Confidence 456788777778888887632 2344444555555556666666666655556
Q ss_pred EEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHH
Q 001087 536 YCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERW 589 (1159)
Q Consensus 536 ~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~ 589 (1159)
..-||. ..++..|=|++.+||-.++++|...|
T Consensus 70 ~lNGAA----------------------Ar~~~~GD~vII~ay~~~~~~e~~~~ 101 (126)
T PRK05449 70 CLNGAA----------------------ARLVQVGDLVIIAAYAQMDEEEAKTH 101 (126)
T ss_pred EeCCHH----------------------HhcCCCCCEEEEEECccCCHHHHhcC
Confidence 667773 23456788999999999999886554
No 226
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=20.23 E-value=1.6e+02 Score=27.96 Aligned_cols=84 Identities=23% Similarity=0.316 Sum_probs=55.9
Q ss_pred CceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEE
Q 001087 456 ERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVL 535 (1159)
Q Consensus 456 ~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l 535 (1159)
..+.|+++=..+..|+++|.- ..|+.+.+..-++..+..+.++..+.|.-.+
T Consensus 17 a~L~YeGSitID~~Ll~aagi----------------------------~~~E~V~I~Nv~NG~Rf~TYvI~g~~gSg~I 68 (111)
T cd06919 17 ADLNYEGSITIDEDLLEAAGI----------------------------LPYEKVLVVNVNNGARFETYVIPGERGSGVI 68 (111)
T ss_pred cccccceeEEECHHHHHhcCC----------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEE
Confidence 456788777778888887532 2344445555555556666666666555556
Q ss_pred EEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHH
Q 001087 536 YCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERW 589 (1159)
Q Consensus 536 ~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~ 589 (1159)
..-||. ..+++.|=|++.+||-.++++|...|
T Consensus 69 ~lNGAA----------------------Ar~~~~GD~vII~sy~~~~~~e~~~~ 100 (111)
T cd06919 69 CLNGAA----------------------ARLGQPGDRVIIMAYALMDEEEAEGH 100 (111)
T ss_pred EeCCHH----------------------HhcCCCCCEEEEEECccCCHHHHhcC
Confidence 667773 23456788999999999998876543
No 227
>PF13198 DUF4014: Protein of unknown function (DUF4014)
Probab=20.22 E-value=2.6e+02 Score=24.17 Aligned_cols=40 Identities=23% Similarity=0.408 Sum_probs=28.1
Q ss_pred hhhhHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHH
Q 001087 13 RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKR 61 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r 61 (1159)
+|-.++.|++..|+-++|+ .|++++.++.-+.|.+-++-+
T Consensus 13 Sr~~efLF~ilfIvlmipI---------~pll~~~~i~~~~E~l~e~Y~ 52 (72)
T PF13198_consen 13 SRKTEFLFFILFIVLMIPI---------SPLLFVWIIGKIIEPLFELYK 52 (72)
T ss_pred hHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999988888774 456666666655555544433
No 228
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=20.01 E-value=4.5e+02 Score=29.42 Aligned_cols=30 Identities=20% Similarity=0.197 Sum_probs=25.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHh
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKME 657 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~e 657 (1159)
.|.-+++.+..+.+++.|++|..+||-...
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 455679999999999999999999998753
No 229
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=20.01 E-value=1.4e+02 Score=30.07 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=29.7
Q ss_pred cEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 618 LTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 618 l~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
+.-+-++|=| -.++++.+.++.+++.|+++|+-||-.
T Consensus 62 ~~gVt~SGGE-l~~~~l~~ll~~lk~~Gl~i~l~Tg~~ 98 (147)
T TIGR02826 62 ISCVLFLGGE-WNREALLSLLKIFKEKGLKTCLYTGLE 98 (147)
T ss_pred CCEEEEechh-cCHHHHHHHHHHHHHCCCCEEEECCCC
Confidence 3457777778 344679999999999999999999953
Done!