Query 001096
Match_columns 1158
No_of_seqs 361 out of 2291
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 10:51:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001096.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001096hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fwz_A Inner membrane protein 99.9 2.6E-21 8.9E-26 192.9 14.5 139 1004-1142 2-140 (140)
2 1zcd_A Na(+)/H(+) antiporter 1 99.8 4.6E-20 1.6E-24 212.3 13.6 296 651-982 58-382 (388)
3 4gx0_A TRKA domain protein; me 99.8 8.9E-19 3E-23 212.2 21.0 139 1005-1145 123-262 (565)
4 3l9w_A Glutathione-regulated p 99.8 4.6E-19 1.6E-23 207.4 15.8 135 1009-1143 4-138 (413)
5 1id1_A Putative potassium chan 99.8 6.1E-19 2.1E-23 177.8 13.0 145 1009-1153 3-152 (153)
6 1lnq_A MTHK channels, potassiu 99.8 7.7E-20 2.6E-24 207.5 6.4 138 1009-1148 115-252 (336)
7 3llv_A Exopolyphosphatase-rela 99.8 5E-18 1.7E-22 168.3 14.7 134 1010-1144 7-140 (141)
8 2aef_A Calcium-gated potassium 99.7 4.8E-18 1.6E-22 182.8 10.4 140 1007-1148 7-146 (234)
9 3c85_A Putative glutathione-re 99.7 7.5E-17 2.6E-21 166.9 14.4 143 1006-1148 36-180 (183)
10 3l4b_C TRKA K+ channel protien 99.7 2.8E-17 9.4E-22 175.2 10.7 138 1011-1148 2-140 (218)
11 4g65_A TRK system potassium up 99.7 4.4E-17 1.5E-21 193.2 8.7 137 1011-1147 5-148 (461)
12 4gx0_A TRKA domain protein; me 99.7 8E-17 2.7E-21 195.1 9.2 134 1010-1147 349-482 (565)
13 2hmt_A YUAA protein; RCK, KTN, 99.6 1E-14 3.5E-19 143.1 13.4 137 1010-1147 7-144 (144)
14 1lss_A TRK system potassium up 99.5 4.8E-14 1.6E-18 137.8 12.3 134 1010-1144 5-139 (140)
15 4g65_A TRK system potassium up 99.5 2.9E-14 1E-18 169.0 11.8 137 1008-1146 234-372 (461)
16 2g1u_A Hypothetical protein TM 99.5 5.6E-14 1.9E-18 141.9 12.2 132 1008-1140 18-150 (155)
17 3naf_A Calcium-activated potas 99.4 1.6E-12 5.6E-17 160.8 12.2 145 1006-1150 50-220 (798)
18 3mt5_A Potassium large conduct 99.3 5.7E-12 1.9E-16 154.5 9.6 142 1009-1150 3-170 (726)
19 4hpf_A Potassium channel subfa 98.8 3.1E-09 1.1E-13 132.6 8.8 141 1009-1150 3-170 (722)
20 3zux_A Transporter, ASBTNM; tr 97.8 0.015 5.3E-07 65.9 30.3 102 655-764 43-150 (332)
21 3ic5_A Putative saccharopine d 97.7 0.00022 7.5E-09 66.9 10.7 103 1010-1116 6-109 (118)
22 1kyq_A Met8P, siroheme biosynt 96.5 0.0021 7E-08 71.3 5.6 103 1009-1114 13-147 (274)
23 3dfz_A SIRC, precorrin-2 dehyd 96.4 0.0054 1.8E-07 66.0 7.6 81 1009-1095 31-113 (223)
24 1hdo_A Biliverdin IX beta redu 95.9 0.015 5.2E-07 59.3 8.3 73 1010-1083 4-77 (206)
25 2jl1_A Triphenylmethane reduct 95.6 0.028 9.6E-07 60.7 9.3 72 1011-1083 2-76 (287)
26 3ius_A Uncharacterized conserv 95.4 0.025 8.4E-07 61.3 7.7 69 1009-1083 5-73 (286)
27 2zcu_A Uncharacterized oxidore 95.3 0.048 1.6E-06 58.8 9.5 86 1012-1098 2-95 (286)
28 2rir_A Dipicolinate synthase, 95.3 0.081 2.8E-06 58.7 11.6 131 1009-1148 157-291 (300)
29 1qyd_A Pinoresinol-lariciresin 95.3 0.066 2.3E-06 58.6 10.7 88 1010-1098 5-107 (313)
30 2r6j_A Eugenol synthase 1; phe 95.2 0.073 2.5E-06 58.6 11.0 89 1009-1098 11-106 (318)
31 3e48_A Putative nucleoside-dip 95.2 0.06 2.1E-06 58.4 10.0 88 1011-1099 2-98 (289)
32 3i6i_A Putative leucoanthocyan 95.1 0.067 2.3E-06 59.8 10.4 88 1010-1098 11-110 (346)
33 3g0o_A 3-hydroxyisobutyrate de 95.1 0.052 1.8E-06 60.2 9.2 70 1010-1086 8-77 (303)
34 1qyc_A Phenylcoumaran benzylic 95.0 0.074 2.5E-06 58.0 10.2 88 1010-1098 5-104 (308)
35 3h2s_A Putative NADH-flavin re 95.0 0.024 8.1E-07 59.0 5.8 82 1012-1096 3-91 (224)
36 2ew2_A 2-dehydropantoate 2-red 95.0 0.018 6E-07 63.4 5.0 105 1011-1117 5-118 (316)
37 2gas_A Isoflavone reductase; N 94.9 0.1 3.6E-06 56.8 11.1 87 1011-1098 4-103 (307)
38 2wm3_A NMRA-like family domain 94.9 0.048 1.6E-06 59.5 8.2 72 1010-1082 6-81 (299)
39 3qha_A Putative oxidoreductase 94.8 0.095 3.3E-06 58.0 10.5 108 1009-1126 15-129 (296)
40 2z2v_A Hypothetical protein PH 94.8 0.076 2.6E-06 61.0 9.7 112 1008-1125 15-130 (365)
41 3qvo_A NMRA family protein; st 94.8 0.031 1.1E-06 59.2 6.1 74 1010-1084 24-99 (236)
42 3r6d_A NAD-dependent epimerase 94.8 0.088 3E-06 54.9 9.4 73 1010-1083 6-83 (221)
43 2h78_A Hibadh, 3-hydroxyisobut 94.7 0.12 4.2E-06 56.9 10.9 108 1011-1127 5-122 (302)
44 3dqp_A Oxidoreductase YLBE; al 94.7 0.064 2.2E-06 55.8 8.2 85 1011-1098 2-97 (219)
45 3ktd_A Prephenate dehydrogenas 94.7 0.071 2.4E-06 60.7 9.1 94 1008-1108 7-101 (341)
46 3pef_A 6-phosphogluconate dehy 94.7 0.1 3.5E-06 57.2 10.2 108 1011-1127 3-120 (287)
47 3d4o_A Dipicolinate synthase s 94.7 0.13 4.4E-06 56.9 11.0 130 1010-1148 156-289 (293)
48 3c1o_A Eugenol synthase; pheny 94.6 0.14 4.8E-06 56.3 11.2 88 1010-1098 5-104 (321)
49 4dll_A 2-hydroxy-3-oxopropiona 94.6 0.13 4.5E-06 57.6 10.9 109 1010-1127 32-149 (320)
50 3doj_A AT3G25530, dehydrogenas 94.6 0.082 2.8E-06 58.9 9.1 109 1010-1127 22-140 (310)
51 3abi_A Putative uncharacterize 94.5 0.15 5.3E-06 58.0 11.4 125 1011-1141 18-148 (365)
52 3ew7_A LMO0794 protein; Q8Y8U8 94.5 0.04 1.4E-06 56.9 6.0 70 1011-1084 2-72 (221)
53 1ff9_A Saccharopine reductase; 94.5 0.19 6.6E-06 59.2 12.4 130 1010-1143 4-141 (450)
54 3naf_A Calcium-activated potas 94.5 0.019 6.6E-07 71.7 4.0 133 1006-1138 398-603 (798)
55 3vkg_A Dynein heavy chain, cyt 94.4 1.3 4.6E-05 63.1 22.3 65 266-330 2012-2076(3245)
56 1pjq_A CYSG, siroheme synthase 94.4 0.05 1.7E-06 64.3 7.2 83 1010-1098 13-97 (457)
57 1txg_A Glycerol-3-phosphate de 94.4 0.021 7.1E-07 63.7 3.7 95 1011-1107 2-104 (335)
58 3dhn_A NAD-dependent epimerase 94.3 0.06 2.1E-06 56.1 6.8 72 1010-1083 5-77 (227)
59 3l6d_A Putative oxidoreductase 94.2 0.11 3.9E-06 57.7 9.3 108 1009-1125 9-124 (306)
60 3vkg_A Dynein heavy chain, cyt 94.2 0.54 1.8E-05 67.0 17.7 60 264-323 2017-2076(3245)
61 3e8x_A Putative NAD-dependent 94.1 0.11 3.7E-06 54.8 8.5 71 1010-1083 22-94 (236)
62 1vpd_A Tartronate semialdehyde 94.1 0.14 4.9E-06 56.1 9.6 68 1011-1086 7-74 (299)
63 3cky_A 2-hydroxymethyl glutara 94.0 0.21 7E-06 54.9 10.7 69 1010-1086 5-73 (301)
64 1jw9_B Molybdopterin biosynthe 93.9 0.066 2.3E-06 58.1 6.3 88 1009-1098 31-146 (249)
65 3pdu_A 3-hydroxyisobutyrate de 93.9 0.14 4.7E-06 56.2 9.0 67 1011-1085 3-69 (287)
66 2x4g_A Nucleoside-diphosphate- 93.7 0.065 2.2E-06 59.3 6.0 71 1011-1082 15-86 (342)
67 2f1k_A Prephenate dehydrogenas 93.7 0.12 3.9E-06 56.3 7.8 87 1011-1107 2-90 (279)
68 2we8_A Xanthine dehydrogenase; 93.6 0.088 3E-06 61.0 7.0 113 1008-1122 203-323 (386)
69 2cvz_A Dehydrogenase, 3-hydrox 93.5 0.13 4.6E-06 55.8 8.1 66 1011-1086 3-68 (289)
70 4ina_A Saccharopine dehydrogen 93.4 0.16 5.4E-06 59.0 8.8 120 1011-1133 3-146 (405)
71 3ggo_A Prephenate dehydrogenas 93.4 0.22 7.5E-06 55.8 9.6 92 1009-1108 33-128 (314)
72 4gbj_A 6-phosphogluconate dehy 93.2 0.14 4.9E-06 56.9 7.8 112 1008-1128 4-123 (297)
73 4ezb_A Uncharacterized conserv 93.1 0.13 4.4E-06 57.7 7.2 103 1009-1123 24-142 (317)
74 2akf_A Coronin-1A; coiled coil 93.1 0.081 2.8E-06 38.2 3.4 26 286-311 3-28 (32)
75 1xgk_A Nitrogen metabolite rep 93.0 0.28 9.5E-06 55.5 10.0 88 1010-1098 6-103 (352)
76 3on5_A BH1974 protein; structu 93.0 0.24 8.2E-06 56.8 9.3 109 1008-1120 198-307 (362)
77 3ego_A Probable 2-dehydropanto 93.0 0.068 2.3E-06 59.6 4.7 112 1010-1125 3-118 (307)
78 2g5c_A Prephenate dehydrogenas 92.8 0.18 6.3E-06 54.8 7.8 87 1011-1106 3-94 (281)
79 1bg6_A N-(1-D-carboxylethyl)-L 92.7 0.23 7.8E-06 55.7 8.5 91 1011-1106 6-108 (359)
80 1xq6_A Unknown protein; struct 92.7 0.2 6.7E-06 52.6 7.5 71 1010-1082 5-78 (253)
81 2eez_A Alanine dehydrogenase; 92.6 0.099 3.4E-06 59.9 5.6 98 1010-1109 167-268 (369)
82 3d1l_A Putative NADP oxidoredu 92.5 0.14 4.8E-06 55.3 6.3 89 1011-1108 12-102 (266)
83 2gf2_A Hibadh, 3-hydroxyisobut 92.5 0.23 7.9E-06 54.3 8.1 68 1011-1086 2-69 (296)
84 3hn2_A 2-dehydropantoate 2-red 92.4 0.48 1.6E-05 52.7 10.6 101 1010-1118 3-114 (312)
85 4id9_A Short-chain dehydrogena 92.4 0.15 5E-06 56.8 6.4 67 1009-1082 19-86 (347)
86 1yb4_A Tartronic semialdehyde 92.3 0.17 5.8E-06 55.3 6.8 67 1011-1086 5-71 (295)
87 4hpf_A Potassium channel subfa 92.2 0.4 1.4E-05 59.8 10.7 116 1005-1120 381-529 (722)
88 3tri_A Pyrroline-5-carboxylate 92.2 0.57 2E-05 51.5 10.7 88 1010-1107 4-97 (280)
89 2vns_A Metalloreductase steap3 92.2 0.18 6E-06 53.2 6.4 66 1010-1084 29-94 (215)
90 3m2p_A UDP-N-acetylglucosamine 92.1 0.45 1.6E-05 52.0 9.9 68 1010-1082 3-71 (311)
91 3obb_A Probable 3-hydroxyisobu 92.1 0.47 1.6E-05 52.9 10.0 108 1011-1127 5-122 (300)
92 3gpi_A NAD-dependent epimerase 92.1 0.099 3.4E-06 56.7 4.4 68 1010-1081 4-71 (286)
93 1lld_A L-lactate dehydrogenase 92.1 0.25 8.5E-06 54.9 7.8 117 1010-1133 8-155 (319)
94 4e21_A 6-phosphogluconate dehy 92.0 0.54 1.9E-05 53.8 10.6 107 1010-1124 23-137 (358)
95 3hwr_A 2-dehydropantoate 2-red 92.0 0.26 8.8E-06 55.1 7.8 109 1009-1125 19-138 (318)
96 1i84_S Smooth muscle myosin he 92.0 0.39 1.3E-05 63.2 10.6 18 150-167 859-876 (1184)
97 2p4q_A 6-phosphogluconate dehy 91.9 0.6 2E-05 55.8 11.2 114 1007-1124 8-131 (497)
98 3c24_A Putative oxidoreductase 91.8 0.18 6.2E-06 55.2 6.1 90 1010-1110 12-103 (286)
99 1mv8_A GMD, GDP-mannose 6-dehy 91.7 0.27 9.2E-06 57.5 7.9 71 1011-1085 2-88 (436)
100 3ce6_A Adenosylhomocysteinase; 91.7 0.22 7.7E-06 59.4 7.1 88 1009-1107 274-361 (494)
101 2axq_A Saccharopine dehydrogen 91.6 0.31 1.1E-05 57.8 8.2 112 1010-1125 24-141 (467)
102 2uyy_A N-PAC protein; long-cha 91.5 0.35 1.2E-05 53.6 8.2 70 1010-1087 31-100 (316)
103 3gt0_A Pyrroline-5-carboxylate 91.4 0.32 1.1E-05 52.2 7.5 67 1010-1084 3-74 (247)
104 2qyt_A 2-dehydropantoate 2-red 91.4 0.18 6.3E-06 55.5 5.7 100 1011-1117 10-127 (317)
105 3to5_A CHEY homolog; alpha(5)b 91.4 0.95 3.3E-05 44.4 10.3 113 1022-1134 2-123 (134)
106 1i36_A Conserved hypothetical 91.2 0.33 1.1E-05 52.2 7.4 66 1011-1086 2-69 (264)
107 2c5a_A GDP-mannose-3', 5'-epim 91.1 0.17 5.8E-06 57.5 5.2 72 1010-1082 30-102 (379)
108 3eod_A Protein HNR; response r 91.1 1.5 5.2E-05 40.7 11.0 97 1032-1129 7-110 (130)
109 1cyd_A Carbonyl reductase; sho 91.1 0.31 1.1E-05 51.3 6.9 73 1010-1082 8-85 (244)
110 2y0c_A BCEC, UDP-glucose dehyd 90.9 0.45 1.5E-05 56.5 8.8 73 1010-1084 9-95 (478)
111 4gwg_A 6-phosphogluconate dehy 90.9 0.73 2.5E-05 54.9 10.5 114 1010-1127 5-128 (484)
112 1i84_S Smooth muscle myosin he 90.8 0.63 2.2E-05 61.3 10.8 7 68-74 683-689 (1184)
113 2bka_A CC3, TAT-interacting pr 90.7 0.082 2.8E-06 55.7 2.0 73 1010-1083 19-94 (242)
114 3ruf_A WBGU; rossmann fold, UD 90.7 0.99 3.4E-05 50.1 10.9 74 1009-1083 25-110 (351)
115 3b1f_A Putative prephenate deh 90.7 0.35 1.2E-05 52.8 7.1 89 1010-1107 7-100 (290)
116 1ks9_A KPA reductase;, 2-dehyd 90.7 0.11 3.8E-06 56.3 3.1 100 1011-1116 2-106 (291)
117 3n58_A Adenosylhomocysteinase; 90.6 0.21 7.1E-06 58.8 5.4 85 1009-1104 247-331 (464)
118 3ojo_A CAP5O; rossmann fold, c 90.6 0.75 2.6E-05 54.0 10.0 74 1010-1085 12-95 (431)
119 1dlj_A UDP-glucose dehydrogena 90.5 0.44 1.5E-05 55.2 8.0 101 1011-1117 2-128 (402)
120 3orq_A N5-carboxyaminoimidazol 90.5 0.28 9.6E-06 56.1 6.3 110 1009-1123 12-125 (377)
121 3qsg_A NAD-binding phosphogluc 90.5 0.42 1.4E-05 53.3 7.5 69 1010-1086 25-96 (312)
122 1c1g_A Tropomyosin; contractIl 90.4 18 0.00063 37.5 26.4 39 273-311 109-147 (284)
123 3d3w_A L-xylulose reductase; u 90.4 0.38 1.3E-05 50.7 6.8 73 1010-1082 8-85 (244)
124 3gg2_A Sugar dehydrogenase, UD 90.4 0.22 7.5E-06 58.8 5.4 72 1011-1084 4-89 (450)
125 2zyd_A 6-phosphogluconate dehy 90.3 0.74 2.5E-05 54.7 9.9 111 1009-1124 15-135 (480)
126 1leh_A Leucine dehydrogenase; 90.2 0.21 7.1E-06 57.4 4.8 106 1010-1130 174-285 (364)
127 3sxp_A ADP-L-glycero-D-mannohe 90.1 0.31 1E-05 54.7 6.0 73 1010-1082 11-99 (362)
128 1hyh_A L-hicdh, L-2-hydroxyiso 90.1 1 3.4E-05 50.1 10.2 108 1011-1127 3-146 (309)
129 1np3_A Ketol-acid reductoisome 90.0 0.44 1.5E-05 53.9 7.3 67 1011-1086 18-85 (338)
130 3hzh_A Chemotaxis response reg 90.0 1.4 4.6E-05 43.0 10.0 61 1073-1133 83-146 (157)
131 2ahr_A Putative pyrroline carb 90.0 0.46 1.6E-05 51.0 7.1 66 1011-1084 5-71 (259)
132 3p2y_A Alanine dehydrogenase/p 89.9 0.18 6E-06 58.3 4.0 100 1009-1109 184-304 (381)
133 1wwk_A Phosphoglycerate dehydr 89.9 0.98 3.3E-05 50.5 9.9 85 1010-1104 143-229 (307)
134 3oj0_A Glutr, glutamyl-tRNA re 89.8 0.17 5.9E-06 49.5 3.3 71 1009-1085 21-92 (144)
135 1y1p_A ARII, aldehyde reductas 89.6 0.24 8.2E-06 54.5 4.7 72 1010-1082 12-92 (342)
136 2efr_A General control protein 89.6 7.2 0.00025 39.5 14.9 111 184-309 43-153 (155)
137 2qxy_A Response regulator; reg 89.6 2.5 8.7E-05 39.8 11.4 100 1032-1133 4-110 (142)
138 1yqg_A Pyrroline-5-carboxylate 89.6 0.4 1.4E-05 51.4 6.3 63 1011-1082 2-66 (263)
139 2izz_A Pyrroline-5-carboxylate 89.5 0.97 3.3E-05 50.5 9.6 88 1011-1108 24-118 (322)
140 3pqe_A L-LDH, L-lactate dehydr 89.4 0.93 3.2E-05 51.2 9.3 91 1010-1108 6-123 (326)
141 3dtt_A NADP oxidoreductase; st 89.3 0.38 1.3E-05 51.6 5.8 70 1009-1086 19-103 (245)
142 4huj_A Uncharacterized protein 89.3 0.81 2.8E-05 48.2 8.2 67 1010-1084 24-92 (220)
143 1a5z_A L-lactate dehydrogenase 89.3 0.69 2.4E-05 51.8 8.1 94 1011-1112 2-121 (319)
144 1lu9_A Methylene tetrahydromet 89.3 0.44 1.5E-05 52.3 6.4 72 1010-1082 120-197 (287)
145 3h9u_A Adenosylhomocysteinase; 89.3 0.32 1.1E-05 57.0 5.5 65 1010-1083 212-276 (436)
146 2pgd_A 6-phosphogluconate dehy 89.2 1.2 4E-05 52.9 10.4 109 1011-1126 4-125 (482)
147 3kto_A Response regulator rece 89.0 2.1 7.3E-05 40.3 10.3 100 1033-1133 7-115 (136)
148 3i83_A 2-dehydropantoate 2-red 89.0 0.49 1.7E-05 52.8 6.6 108 1010-1124 3-123 (320)
149 3k96_A Glycerol-3-phosphate de 89.0 0.47 1.6E-05 54.2 6.6 93 1010-1107 30-133 (356)
150 3ko8_A NAD-dependent epimerase 89.0 0.4 1.4E-05 52.2 5.8 69 1011-1082 2-71 (312)
151 2gn4_A FLAA1 protein, UDP-GLCN 88.9 0.51 1.7E-05 53.1 6.7 72 1010-1082 22-100 (344)
152 4e12_A Diketoreductase; oxidor 88.9 0.57 2E-05 51.3 7.0 41 1010-1050 5-45 (283)
153 1tmy_A CHEY protein, TMY; chem 88.7 2.9 9.9E-05 38.1 10.7 101 1033-1133 3-110 (120)
154 3f6c_A Positive transcription 88.7 1.1 3.8E-05 41.8 8.0 97 1034-1132 3-108 (134)
155 2iz1_A 6-phosphogluconate dehy 88.7 1.2 4E-05 52.8 9.9 95 1010-1108 6-103 (474)
156 1sb8_A WBPP; epimerase, 4-epim 88.7 0.6 2E-05 52.1 7.0 72 1010-1082 28-111 (352)
157 3ghy_A Ketopantoate reductase 88.6 0.39 1.3E-05 54.0 5.4 68 1011-1084 5-81 (335)
158 3kht_A Response regulator; PSI 88.3 3.9 0.00013 38.6 11.7 102 1032-1133 5-117 (144)
159 3d64_A Adenosylhomocysteinase; 88.3 0.56 1.9E-05 56.0 6.7 84 1009-1103 277-360 (494)
160 2raf_A Putative dinucleotide-b 88.2 0.58 2E-05 49.0 6.2 49 1010-1084 20-68 (209)
161 1pgj_A 6PGDH, 6-PGDH, 6-phosph 88.1 1.1 3.7E-05 53.2 9.1 93 1011-1108 3-103 (478)
162 3u59_A Tropomyosin beta chain; 88.1 1.9 6.6E-05 40.5 9.0 60 270-329 25-91 (101)
163 1z82_A Glycerol-3-phosphate de 88.0 0.54 1.8E-05 52.7 6.1 71 1006-1084 11-91 (335)
164 2ehd_A Oxidoreductase, oxidore 87.7 0.57 2E-05 49.1 5.8 74 1009-1082 5-87 (234)
165 3o38_A Short chain dehydrogena 87.7 0.52 1.8E-05 50.6 5.5 74 1009-1082 22-110 (266)
166 2o3j_A UDP-glucose 6-dehydroge 87.6 1.2 4E-05 53.0 8.9 74 1010-1085 10-98 (481)
167 2g76_A 3-PGDH, D-3-phosphoglyc 87.5 1.7 5.7E-05 49.4 9.8 85 1010-1104 166-252 (335)
168 1v8b_A Adenosylhomocysteinase; 87.5 0.52 1.8E-05 56.0 5.8 85 1009-1104 257-341 (479)
169 4e7p_A Response regulator; DNA 87.4 2.8 9.7E-05 40.1 10.1 101 1033-1133 21-129 (150)
170 3f9i_A 3-oxoacyl-[acyl-carrier 87.3 0.92 3.2E-05 48.0 7.2 75 1008-1082 13-93 (249)
171 2pzm_A Putative nucleotide sug 87.3 1.3 4.4E-05 49.0 8.6 72 1010-1082 21-97 (330)
172 4e4t_A Phosphoribosylaminoimid 87.2 0.46 1.6E-05 55.3 5.1 110 1009-1123 35-148 (419)
173 3cnb_A DNA-binding response re 87.1 3.9 0.00013 38.2 10.8 102 1032-1133 8-119 (143)
174 3slg_A PBGP3 protein; structur 87.1 0.67 2.3E-05 52.0 6.2 72 1010-1082 25-100 (372)
175 1orr_A CDP-tyvelose-2-epimeras 87.0 1.9 6.4E-05 47.5 9.7 72 1011-1083 3-83 (347)
176 3gt7_A Sensor protein; structu 87.0 4.7 0.00016 38.9 11.6 102 1031-1133 6-116 (154)
177 4ffl_A PYLC; amino acid, biosy 86.9 0.42 1.4E-05 54.0 4.4 110 1011-1123 3-118 (363)
178 2ag5_A DHRS6, dehydrogenase/re 86.9 0.74 2.5E-05 48.9 6.1 72 1010-1081 7-82 (246)
179 3gvp_A Adenosylhomocysteinase 86.9 0.45 1.5E-05 55.7 4.7 66 1009-1083 220-285 (435)
180 1jay_A Coenzyme F420H2:NADP+ o 86.9 0.97 3.3E-05 46.8 6.9 69 1011-1086 2-77 (212)
181 2rjn_A Response regulator rece 86.9 6.3 0.00022 37.7 12.4 101 1032-1133 7-115 (154)
182 3ged_A Short-chain dehydrogena 86.7 0.72 2.5E-05 50.1 6.0 70 1010-1079 3-81 (247)
183 2qv0_A Protein MRKE; structura 86.7 3.1 0.00011 39.2 9.9 102 1031-1133 8-116 (143)
184 3q2o_A Phosphoribosylaminoimid 86.7 0.61 2.1E-05 53.3 5.7 110 1009-1123 14-127 (389)
185 2pk3_A GDP-6-deoxy-D-LYXO-4-he 86.6 1.2 4.2E-05 48.5 7.9 70 1009-1082 12-83 (321)
186 3hdg_A Uncharacterized protein 86.6 2.2 7.7E-05 39.9 8.7 102 1031-1133 6-114 (137)
187 3jte_A Response regulator rece 86.6 4.6 0.00016 38.0 11.0 100 1033-1133 4-112 (143)
188 1zej_A HBD-9, 3-hydroxyacyl-CO 86.5 0.43 1.5E-05 53.2 4.1 69 1007-1085 10-85 (293)
189 3eag_A UDP-N-acetylmuramate:L- 86.5 1.3 4.3E-05 49.8 8.0 76 1010-1090 5-83 (326)
190 4dio_A NAD(P) transhydrogenase 86.4 0.54 1.9E-05 54.7 5.1 100 1009-1109 190-314 (405)
191 3lk7_A UDP-N-acetylmuramoylala 86.4 1.3 4.6E-05 51.8 8.5 76 1009-1090 9-89 (451)
192 1dbw_A Transcriptional regulat 86.4 5.6 0.00019 36.6 11.3 101 1032-1133 3-110 (126)
193 3p19_A BFPVVD8, putative blue 86.3 0.68 2.3E-05 50.2 5.5 74 1009-1082 16-96 (266)
194 2c20_A UDP-glucose 4-epimerase 86.3 0.5 1.7E-05 52.0 4.5 72 1011-1082 3-76 (330)
195 2vhw_A Alanine dehydrogenase; 86.1 0.55 1.9E-05 54.0 4.9 97 1009-1107 168-268 (377)
196 2qr3_A Two-component system re 86.1 3.4 0.00012 38.6 9.7 100 1033-1133 4-115 (140)
197 1oc2_A DTDP-glucose 4,6-dehydr 86.1 0.62 2.1E-05 51.6 5.1 72 1011-1083 6-85 (348)
198 1uls_A Putative 3-oxoacyl-acyl 86.0 0.88 3E-05 48.4 6.2 73 1010-1082 6-86 (245)
199 1qkk_A DCTD, C4-dicarboxylate 86.0 6.6 0.00022 37.6 12.0 100 1033-1133 4-110 (155)
200 2yy7_A L-threonine dehydrogena 86.0 0.62 2.1E-05 50.6 5.0 72 1010-1083 3-78 (312)
201 3u1c_A Tropomyosin alpha-1 cha 85.9 3.1 0.0001 39.2 9.0 59 271-329 26-91 (101)
202 3p7m_A Malate dehydrogenase; p 85.8 2.5 8.5E-05 47.6 10.0 92 1010-1109 6-124 (321)
203 2rh8_A Anthocyanidin reductase 85.8 0.3 1E-05 54.1 2.4 72 1009-1081 9-88 (338)
204 3vku_A L-LDH, L-lactate dehydr 85.8 1.9 6.5E-05 48.7 9.0 92 1009-1108 9-126 (326)
205 2rcy_A Pyrroline carboxylate r 85.6 1.9 6.4E-05 46.1 8.5 86 1011-1111 6-95 (262)
206 3nzo_A UDP-N-acetylglucosamine 85.3 0.68 2.3E-05 53.3 5.2 73 1010-1082 36-121 (399)
207 1ek6_A UDP-galactose 4-epimera 85.3 1.1 3.6E-05 49.7 6.6 73 1010-1082 3-90 (348)
208 2j48_A Two-component sensor ki 85.2 2.2 7.7E-05 38.1 7.7 98 1034-1133 3-107 (119)
209 2q1s_A Putative nucleotide sug 85.1 0.71 2.4E-05 52.2 5.1 72 1011-1083 34-109 (377)
210 2dpo_A L-gulonate 3-dehydrogen 85.1 1.4 4.8E-05 49.5 7.5 104 1010-1116 7-131 (319)
211 2nwq_A Probable short-chain de 85.1 0.85 2.9E-05 49.6 5.6 74 1008-1081 20-105 (272)
212 3mt5_A Potassium large conduct 85.1 1.2 3.9E-05 55.5 7.3 113 1006-1118 374-554 (726)
213 2d5c_A AROE, shikimate 5-dehyd 85.1 0.51 1.7E-05 51.1 3.7 102 1011-1122 118-224 (263)
214 3zux_A Transporter, ASBTNM; tr 85.0 10 0.00034 42.8 14.5 89 852-946 29-121 (332)
215 2gcg_A Glyoxylate reductase/hy 85.0 1 3.5E-05 50.8 6.3 66 1010-1084 156-221 (330)
216 2c29_D Dihydroflavonol 4-reduc 85.0 0.56 1.9E-05 51.9 4.1 71 1010-1081 6-85 (337)
217 1f0y_A HCDH, L-3-hydroxyacyl-C 84.9 2.7 9.4E-05 46.2 9.6 39 1010-1048 16-54 (302)
218 2pi1_A D-lactate dehydrogenase 84.9 1.8 6E-05 49.1 8.2 86 1007-1103 138-226 (334)
219 2v6g_A Progesterone 5-beta-red 84.9 0.5 1.7E-05 52.6 3.7 71 1011-1082 3-81 (364)
220 3lua_A Response regulator rece 84.9 5.5 0.00019 37.4 10.6 100 1032-1132 4-115 (140)
221 1fmc_A 7 alpha-hydroxysteroid 84.9 0.82 2.8E-05 48.3 5.2 73 1010-1082 12-97 (255)
222 2v6b_A L-LDH, L-lactate dehydr 84.8 1.7 5.9E-05 48.3 8.0 109 1011-1127 2-138 (304)
223 2bll_A Protein YFBG; decarboxy 84.8 0.43 1.5E-05 52.6 3.1 70 1011-1081 2-75 (345)
224 3hdv_A Response regulator; PSI 84.7 5 0.00017 37.4 10.2 101 1032-1133 7-116 (136)
225 1l7d_A Nicotinamide nucleotide 84.7 0.69 2.4E-05 53.2 4.8 99 1009-1108 172-295 (384)
226 3rft_A Uronate dehydrogenase; 84.7 0.39 1.3E-05 51.7 2.6 68 1010-1081 4-72 (267)
227 3ak4_A NADH-dependent quinucli 84.7 1.2 4.1E-05 47.7 6.5 73 1010-1082 13-95 (263)
228 2ekl_A D-3-phosphoglycerate de 84.7 2.4 8.1E-05 47.5 9.1 66 1010-1085 143-208 (313)
229 3vtf_A UDP-glucose 6-dehydroge 84.6 1.2 3.9E-05 52.6 6.7 73 1010-1084 22-108 (444)
230 3dii_A Short-chain dehydrogena 84.6 1.1 3.7E-05 47.8 6.0 72 1010-1081 3-83 (247)
231 3ek2_A Enoyl-(acyl-carrier-pro 84.5 1.4 4.8E-05 47.0 6.9 75 1007-1081 12-100 (271)
232 3gvi_A Malate dehydrogenase; N 84.4 2.6 8.8E-05 47.6 9.2 92 1010-1109 8-126 (324)
233 3crn_A Response regulator rece 84.4 5.6 0.00019 37.1 10.3 100 1033-1133 4-110 (132)
234 2q1w_A Putative nucleotide sug 84.4 1.7 5.7E-05 48.1 7.6 72 1010-1082 22-98 (333)
235 1zcj_A Peroxisomal bifunctiona 84.4 2.9 9.8E-05 49.3 10.0 68 1010-1085 38-126 (463)
236 3enk_A UDP-glucose 4-epimerase 84.3 1.3 4.6E-05 48.7 6.8 73 1010-1082 6-87 (341)
237 1smk_A Malate dehydrogenase, g 84.2 2.9 9.9E-05 47.0 9.5 117 1010-1129 9-155 (326)
238 2pv7_A T-protein [includes: ch 84.2 1.4 4.9E-05 48.5 7.0 35 1009-1043 21-56 (298)
239 3jtm_A Formate dehydrogenase, 84.1 0.91 3.1E-05 51.8 5.4 87 1010-1104 165-253 (351)
240 2w2k_A D-mandelate dehydrogena 84.1 0.89 3E-05 51.7 5.3 68 1010-1085 164-232 (348)
241 3hv2_A Response regulator/HD d 84.1 5.7 0.00019 38.1 10.5 62 1072-1133 57-122 (153)
242 1rkx_A CDP-glucose-4,6-dehydra 84.1 1.3 4.5E-05 49.2 6.7 73 1010-1082 10-89 (357)
243 2p5y_A UDP-glucose 4-epimerase 84.0 0.81 2.8E-05 49.9 4.8 71 1011-1082 2-75 (311)
244 3gem_A Short chain dehydrogena 84.0 1.1 3.9E-05 48.2 5.9 73 1010-1082 28-108 (260)
245 2h7i_A Enoyl-[acyl-carrier-pro 84.0 1.6 5.5E-05 46.9 7.1 60 1010-1069 8-74 (269)
246 2pd6_A Estradiol 17-beta-dehyd 84.0 1.3 4.4E-05 47.1 6.3 73 1010-1082 8-101 (264)
247 3cz5_A Two-component response 83.8 3.8 0.00013 39.3 9.0 102 1032-1133 5-114 (153)
248 1x13_A NAD(P) transhydrogenase 83.8 0.77 2.6E-05 53.3 4.7 100 1009-1109 172-294 (401)
249 1xu9_A Corticosteroid 11-beta- 83.7 0.83 2.8E-05 49.6 4.7 71 1010-1080 29-113 (286)
250 3l6e_A Oxidoreductase, short-c 83.7 0.89 3E-05 48.2 4.8 73 1010-1082 4-86 (235)
251 3kkj_A Amine oxidase, flavin-c 83.7 0.61 2.1E-05 47.2 3.4 33 1011-1043 4-36 (336)
252 3e18_A Oxidoreductase; dehydro 83.6 3.2 0.00011 47.0 9.7 124 1010-1142 6-140 (359)
253 3eul_A Possible nitrate/nitrit 83.6 4.7 0.00016 38.6 9.6 101 1033-1133 16-124 (152)
254 1n7h_A GDP-D-mannose-4,6-dehyd 83.5 0.65 2.2E-05 52.3 3.9 73 1010-1082 29-115 (381)
255 3pid_A UDP-glucose 6-dehydroge 83.5 1.1 3.7E-05 52.6 5.8 71 1011-1084 38-120 (432)
256 1yo6_A Putative carbonyl reduc 83.5 1.2 3.9E-05 46.7 5.6 72 1010-1081 4-89 (250)
257 3njr_A Precorrin-6Y methylase; 83.4 4.3 0.00015 42.0 9.8 103 1010-1120 57-171 (204)
258 4e5n_A Thermostable phosphite 83.3 2.1 7.1E-05 48.4 7.9 86 1010-1104 146-233 (330)
259 2pln_A HP1043, response regula 83.3 6.3 0.00022 36.8 10.2 58 1072-1133 61-122 (137)
260 1qsg_A Enoyl-[acyl-carrier-pro 83.2 1.4 5E-05 47.2 6.3 72 1010-1081 10-95 (265)
261 2pd4_A Enoyl-[acyl-carrier-pro 83.2 1.6 5.6E-05 47.1 6.8 72 1010-1081 7-92 (275)
262 2q3e_A UDP-glucose 6-dehydroge 83.2 1.3 4.5E-05 52.2 6.4 73 1011-1085 7-94 (467)
263 1evy_A Glycerol-3-phosphate de 83.1 0.46 1.6E-05 53.8 2.5 68 1011-1084 17-96 (366)
264 1guz_A Malate dehydrogenase; o 83.1 3.2 0.00011 46.2 9.3 101 1011-1118 2-130 (310)
265 4a7p_A UDP-glucose dehydrogena 83.1 1.8 6.2E-05 50.9 7.5 74 1010-1085 9-96 (446)
266 1zk4_A R-specific alcohol dehy 83.0 1.4 4.9E-05 46.3 6.1 73 1010-1082 7-91 (251)
267 1y7t_A Malate dehydrogenase; N 83.0 3.9 0.00013 45.7 9.9 126 1011-1138 6-166 (327)
268 3ay3_A NAD-dependent epimerase 83.0 0.35 1.2E-05 51.8 1.3 68 1011-1082 4-72 (267)
269 4dad_A Putative pilus assembly 82.8 3.6 0.00012 39.0 8.4 62 1072-1133 66-130 (146)
270 2a35_A Hypothetical protein PA 82.8 0.54 1.9E-05 48.1 2.6 67 1010-1083 6-75 (215)
271 3oz2_A Digeranylgeranylglycero 82.8 0.48 1.6E-05 52.8 2.4 55 1011-1072 6-60 (397)
272 3asu_A Short-chain dehydrogena 82.8 1.2 4.2E-05 47.5 5.5 71 1011-1081 2-82 (248)
273 3pp8_A Glyoxylate/hydroxypyruv 82.7 3 0.0001 46.8 8.9 85 1009-1103 139-225 (315)
274 3gl9_A Response regulator; bet 82.7 10 0.00034 34.9 11.2 100 1033-1133 3-111 (122)
275 2p91_A Enoyl-[acyl-carrier-pro 82.5 1.9 6.7E-05 46.7 7.1 72 1010-1081 22-107 (285)
276 1eq2_A ADP-L-glycero-D-mannohe 82.5 1.2 4E-05 48.3 5.3 68 1012-1082 2-77 (310)
277 4g2n_A D-isomer specific 2-hyd 82.5 4.6 0.00016 45.9 10.4 85 1010-1104 174-260 (345)
278 2wyu_A Enoyl-[acyl carrier pro 82.4 1.6 5.4E-05 46.8 6.2 72 1010-1081 9-94 (261)
279 2dbq_A Glyoxylate reductase; D 82.4 1.3 4.6E-05 49.9 5.9 85 1010-1104 151-237 (334)
280 2z1m_A GDP-D-mannose dehydrata 82.3 0.72 2.4E-05 50.7 3.6 73 1010-1082 4-84 (345)
281 4b79_A PA4098, probable short- 82.3 0.75 2.6E-05 49.9 3.6 70 1010-1079 12-84 (242)
282 3afn_B Carbonyl reductase; alp 82.3 0.96 3.3E-05 47.8 4.4 73 1010-1082 8-94 (258)
283 3nep_X Malate dehydrogenase; h 82.2 2.9 0.0001 46.9 8.5 90 1011-1108 2-119 (314)
284 1hdc_A 3-alpha, 20 beta-hydrox 82.2 1.3 4.3E-05 47.5 5.3 72 1010-1081 6-87 (254)
285 2bgk_A Rhizome secoisolaricire 82.1 1.3 4.4E-05 47.5 5.4 72 1010-1081 17-100 (278)
286 1pjc_A Protein (L-alanine dehy 82.1 0.51 1.8E-05 53.8 2.3 99 1010-1109 168-269 (361)
287 3awd_A GOX2181, putative polyo 82.1 1.5 5.1E-05 46.5 5.8 72 1010-1081 14-98 (260)
288 2z1n_A Dehydrogenase; reductas 82.0 1.2 4.2E-05 47.5 5.2 72 1010-1082 8-94 (260)
289 1pzg_A LDH, lactate dehydrogen 82.0 0.68 2.3E-05 52.3 3.2 95 1010-1110 10-135 (331)
290 3rqi_A Response regulator prot 82.0 5.9 0.0002 39.6 10.0 101 1032-1133 7-114 (184)
291 1pqw_A Polyketide synthase; ro 81.9 2.9 0.0001 42.6 7.8 93 1009-1106 39-136 (198)
292 3h7a_A Short chain dehydrogena 81.7 1.1 3.6E-05 48.1 4.5 73 1010-1082 8-92 (252)
293 3cu5_A Two component transcrip 81.7 9.4 0.00032 36.1 10.9 101 1033-1133 3-112 (141)
294 3imf_A Short chain dehydrogena 81.7 1.3 4.3E-05 47.5 5.1 73 1010-1082 7-92 (257)
295 3l77_A Short-chain alcohol deh 81.6 2 6.9E-05 44.9 6.6 72 1011-1082 4-89 (235)
296 1p9l_A Dihydrodipicolinate red 81.5 5 0.00017 43.4 9.8 110 1011-1145 2-121 (245)
297 1i24_A Sulfolipid biosynthesis 81.5 1.6 5.5E-05 49.3 6.2 73 1009-1082 11-109 (404)
298 1hxh_A 3BETA/17BETA-hydroxyste 81.5 1.2 4.2E-05 47.5 4.9 72 1010-1081 7-88 (253)
299 3h5n_A MCCB protein; ubiquitin 81.5 2.1 7.3E-05 48.7 7.1 88 1009-1098 118-234 (353)
300 2wsb_A Galactitol dehydrogenas 81.4 1.2 4E-05 47.1 4.7 73 1010-1082 12-94 (254)
301 1yio_A Response regulatory pro 81.4 6.1 0.00021 40.0 9.9 101 1032-1133 4-111 (208)
302 3ppi_A 3-hydroxyacyl-COA dehyd 81.3 1.3 4.4E-05 48.0 5.0 74 1007-1080 27-110 (281)
303 3ax6_A Phosphoribosylaminoimid 81.3 2.1 7.1E-05 48.5 7.0 107 1011-1122 3-114 (380)
304 1xkq_A Short-chain reductase f 81.3 1.3 4.4E-05 48.1 5.0 72 1010-1081 7-94 (280)
305 1srr_A SPO0F, sporulation resp 81.2 8.3 0.00028 35.2 10.0 100 1033-1133 4-110 (124)
306 2j6i_A Formate dehydrogenase; 81.2 1.3 4.5E-05 50.7 5.3 67 1010-1084 165-232 (364)
307 2cfc_A 2-(R)-hydroxypropyl-COM 81.2 1.4 4.9E-05 46.3 5.3 72 1010-1081 3-88 (250)
308 1iy8_A Levodione reductase; ox 81.2 1.7 5.9E-05 46.6 6.0 72 1010-1081 14-100 (267)
309 4e6p_A Probable sorbitol dehyd 81.1 1.4 4.9E-05 47.1 5.3 73 1010-1082 9-91 (259)
310 3nyw_A Putative oxidoreductase 81.0 1.6 5.6E-05 46.6 5.7 73 1010-1082 8-96 (250)
311 2hjr_A Malate dehydrogenase; m 81.0 4.3 0.00015 45.7 9.3 94 1009-1110 14-134 (328)
312 1tlt_A Putative oxidoreductase 81.0 4.4 0.00015 44.7 9.4 105 1010-1125 6-121 (319)
313 3g79_A NDP-N-acetyl-D-galactos 81.0 2.7 9.1E-05 50.0 7.9 75 1011-1085 20-113 (478)
314 3rd5_A Mypaa.01249.C; ssgcid, 80.9 1.6 5.5E-05 47.5 5.7 72 1010-1081 17-94 (291)
315 2pnf_A 3-oxoacyl-[acyl-carrier 80.9 1.4 4.9E-05 46.2 5.2 73 1010-1082 8-94 (248)
316 3h1g_A Chemotaxis protein CHEY 80.9 8.1 0.00028 35.8 9.9 102 1032-1133 5-116 (129)
317 2zqz_A L-LDH, L-lactate dehydr 80.9 4 0.00014 45.9 9.1 94 1009-1111 9-128 (326)
318 3m1a_A Putative dehydrogenase; 80.8 1.6 5.3E-05 47.2 5.5 73 1010-1082 6-88 (281)
319 3tnl_A Shikimate dehydrogenase 80.7 1.7 5.9E-05 48.8 5.9 73 1009-1082 154-235 (315)
320 1yqd_A Sinapyl alcohol dehydro 80.7 2.9 0.0001 47.3 7.9 74 1009-1084 188-262 (366)
321 1ur5_A Malate dehydrogenase; o 80.7 4.4 0.00015 45.1 9.2 93 1010-1110 3-122 (309)
322 3ucx_A Short chain dehydrogena 80.6 1.5 5.1E-05 47.1 5.2 72 1010-1081 12-96 (264)
323 4egb_A DTDP-glucose 4,6-dehydr 80.6 2.1 7.2E-05 47.3 6.6 73 1010-1082 25-107 (346)
324 3ai3_A NADPH-sorbose reductase 80.5 1.7 5.9E-05 46.4 5.7 73 1010-1082 8-94 (263)
325 3qiv_A Short-chain dehydrogena 80.4 1.2 4.2E-05 47.2 4.4 72 1010-1081 10-94 (253)
326 3a10_A Response regulator; pho 80.4 4.3 0.00015 36.6 7.6 99 1034-1133 3-106 (116)
327 1rpn_A GDP-mannose 4,6-dehydra 80.4 1.3 4.3E-05 48.8 4.7 74 1009-1082 14-95 (335)
328 3b2n_A Uncharacterized protein 80.4 7.1 0.00024 36.4 9.4 100 1034-1133 5-112 (133)
329 4hv4_A UDP-N-acetylmuramate--L 80.4 2.1 7E-05 50.9 6.8 75 1009-1090 22-98 (494)
330 1yde_A Retinal dehydrogenase/r 80.3 1.5 5.1E-05 47.4 5.2 72 1010-1081 10-90 (270)
331 3oig_A Enoyl-[acyl-carrier-pro 80.3 1.5 5.1E-05 46.9 5.1 72 1010-1081 8-95 (266)
332 3bio_A Oxidoreductase, GFO/IDH 80.3 1.9 6.6E-05 47.9 6.1 120 1010-1142 10-139 (304)
333 3cg0_A Response regulator rece 80.2 6.1 0.00021 36.8 8.9 100 1033-1133 10-117 (140)
334 2a4k_A 3-oxoacyl-[acyl carrier 80.2 1.9 6.5E-05 46.5 5.9 72 1010-1081 7-88 (263)
335 1jbe_A Chemotaxis protein CHEY 80.1 17 0.00058 33.2 11.8 101 1032-1133 4-114 (128)
336 3grc_A Sensor protein, kinase; 80.1 5.5 0.00019 37.3 8.5 100 1033-1133 7-116 (140)
337 4eso_A Putative oxidoreductase 80.1 1.5 5E-05 47.1 4.9 72 1010-1081 9-90 (255)
338 3rkr_A Short chain oxidoreduct 80.0 1.4 4.7E-05 47.3 4.7 73 1010-1082 30-115 (262)
339 2l0e_A Sodium/hydrogen exchang 80.0 0.29 9.9E-06 37.0 -0.5 29 710-738 2-30 (33)
340 2jah_A Clavulanic acid dehydro 79.9 1.7 5.8E-05 46.2 5.3 72 1010-1081 8-92 (247)
341 1k68_A Phytochrome response re 79.9 17 0.00057 33.4 11.8 101 1033-1133 3-120 (140)
342 3uuw_A Putative oxidoreductase 79.9 3.9 0.00013 45.0 8.4 105 1010-1125 7-122 (308)
343 2qsj_A DNA-binding response re 79.9 6.6 0.00022 37.5 9.1 101 1033-1133 4-113 (154)
344 4dyv_A Short-chain dehydrogena 79.8 1.8 6.2E-05 47.0 5.7 72 1010-1081 29-110 (272)
345 3r1i_A Short-chain type dehydr 79.8 1.7 5.9E-05 47.2 5.5 72 1010-1081 33-117 (276)
346 3svt_A Short-chain type dehydr 79.8 1.4 4.7E-05 47.9 4.6 73 1010-1082 12-100 (281)
347 3pk0_A Short-chain dehydrogena 79.8 2.2 7.6E-05 45.8 6.2 73 1010-1082 11-97 (262)
348 3lyl_A 3-oxoacyl-(acyl-carrier 79.8 1.7 5.7E-05 45.9 5.2 73 1010-1082 6-91 (247)
349 1uuf_A YAHK, zinc-type alcohol 79.7 2.5 8.6E-05 48.0 7.0 74 1009-1084 195-268 (369)
350 3ezy_A Dehydrogenase; structur 79.6 4.9 0.00017 45.0 9.2 124 1011-1142 4-139 (344)
351 1kjq_A GART 2, phosphoribosylg 79.5 1.8 6.2E-05 49.0 5.7 111 1008-1122 10-127 (391)
352 2ae2_A Protein (tropinone redu 79.5 1.8 6.3E-05 46.2 5.5 73 1010-1082 10-96 (260)
353 1ja9_A 4HNR, 1,3,6,8-tetrahydr 79.4 2.4 8.2E-05 45.1 6.3 72 1010-1081 22-107 (274)
354 1zud_1 Adenylyltransferase THI 79.3 2.5 8.7E-05 45.6 6.5 88 1009-1098 28-143 (251)
355 2ewd_A Lactate dehydrogenase,; 79.3 3.3 0.00011 46.2 7.6 110 1010-1127 5-145 (317)
356 3tpc_A Short chain alcohol deh 79.3 1.7 5.7E-05 46.5 5.0 72 1010-1081 8-89 (257)
357 3k5i_A Phosphoribosyl-aminoimi 79.3 1 3.6E-05 51.9 3.7 110 1009-1122 24-137 (403)
358 4fgs_A Probable dehydrogenase 79.2 2 7E-05 47.2 5.8 74 1007-1080 26-110 (273)
359 3snk_A Response regulator CHEY 79.1 3.7 0.00013 38.5 6.9 99 1034-1133 16-122 (135)
360 3n74_A 3-ketoacyl-(acyl-carrie 79.1 1.8 6.1E-05 46.1 5.2 72 1010-1081 10-91 (261)
361 3evt_A Phosphoglycerate dehydr 79.1 6.9 0.00023 44.1 10.2 85 1010-1104 138-224 (324)
362 1y6j_A L-lactate dehydrogenase 79.1 3.7 0.00013 46.0 8.0 93 1010-1110 8-125 (318)
363 1x0v_A GPD-C, GPDH-C, glycerol 79.0 1.3 4.6E-05 49.5 4.4 68 1011-1084 10-101 (354)
364 2dwc_A PH0318, 433AA long hypo 79.0 1.6 5.6E-05 50.4 5.2 111 1009-1123 19-136 (433)
365 2rdm_A Response regulator rece 79.0 13 0.00043 34.2 10.5 95 1032-1127 5-107 (132)
366 1gdh_A D-glycerate dehydrogena 78.9 1.8 6.1E-05 48.7 5.3 86 1010-1104 147-235 (320)
367 3aw8_A PURK, phosphoribosylami 78.8 2.5 8.5E-05 47.7 6.6 105 1012-1122 2-110 (369)
368 2x6t_A ADP-L-glycero-D-manno-h 78.8 2.2 7.6E-05 47.5 6.1 72 1010-1082 47-124 (357)
369 3r0j_A Possible two component 78.8 8 0.00027 40.7 10.2 101 1033-1134 24-131 (250)
370 3gvc_A Oxidoreductase, probabl 78.8 2.2 7.5E-05 46.5 5.9 72 1010-1081 30-111 (277)
371 1yxm_A Pecra, peroxisomal tran 78.8 2.3 8E-05 46.2 6.1 73 1010-1082 19-109 (303)
372 3gg9_A D-3-phosphoglycerate de 78.7 4.3 0.00015 46.3 8.4 87 1010-1105 161-249 (352)
373 3rih_A Short chain dehydrogena 78.6 2.1 7.2E-05 47.1 5.8 72 1010-1081 42-127 (293)
374 3db2_A Putative NADPH-dependen 78.6 5.6 0.00019 44.6 9.4 124 1010-1142 6-141 (354)
375 3i1j_A Oxidoreductase, short c 78.6 3.6 0.00012 43.2 7.4 73 1010-1082 15-103 (247)
376 3h8v_A Ubiquitin-like modifier 78.5 2.9 0.0001 46.5 6.8 90 1009-1098 36-162 (292)
377 3ajr_A NDP-sugar epimerase; L- 78.5 1.4 5E-05 47.9 4.3 66 1012-1082 2-71 (317)
378 1xhl_A Short-chain dehydrogena 78.5 1.7 5.7E-05 47.9 4.8 72 1010-1081 27-114 (297)
379 1t2a_A GDP-mannose 4,6 dehydra 78.4 1.4 4.8E-05 49.4 4.3 73 1010-1082 25-111 (375)
380 3two_A Mannitol dehydrogenase; 78.4 1.5 5.1E-05 49.2 4.5 69 1009-1084 177-245 (348)
381 3ioy_A Short-chain dehydrogena 78.4 1.7 5.7E-05 48.4 4.9 73 1010-1082 9-96 (319)
382 2hk9_A Shikimate dehydrogenase 78.4 1.5 5E-05 48.0 4.3 104 1010-1123 130-238 (275)
383 1gpj_A Glutamyl-tRNA reductase 78.4 1.4 4.8E-05 51.0 4.4 71 1009-1085 167-239 (404)
384 3ond_A Adenosylhomocysteinase; 78.3 1.8 6.1E-05 51.6 5.2 66 1009-1083 265-330 (488)
385 1w6u_A 2,4-dienoyl-COA reducta 78.3 3 0.0001 45.3 6.8 73 1010-1082 27-113 (302)
386 3k31_A Enoyl-(acyl-carrier-pro 78.2 2.9 9.9E-05 45.8 6.7 72 1010-1081 31-116 (296)
387 1geg_A Acetoin reductase; SDR 78.2 2 6.8E-05 45.8 5.2 72 1010-1081 3-87 (256)
388 3guy_A Short-chain dehydrogena 78.2 3.4 0.00011 43.2 6.9 72 1011-1082 3-81 (230)
389 2o23_A HADH2 protein; HSD17B10 78.2 1.8 6.1E-05 46.0 4.9 72 1010-1081 13-94 (265)
390 3h5i_A Response regulator/sens 78.1 4.9 0.00017 37.9 7.5 100 1032-1133 5-113 (140)
391 4fn4_A Short chain dehydrogena 78.1 2 6.8E-05 46.8 5.2 73 1007-1079 4-90 (254)
392 4aj2_A L-lactate dehydrogenase 78.1 5.4 0.00018 45.1 8.9 95 1009-1109 19-138 (331)
393 3cxt_A Dehydrogenase with diff 78.1 2.2 7.6E-05 46.7 5.7 72 1010-1081 35-119 (291)
394 1nff_A Putative oxidoreductase 78.0 2 6.8E-05 46.1 5.2 73 1010-1082 8-90 (260)
395 1r6d_A TDP-glucose-4,6-dehydra 78.0 2.7 9.2E-05 46.2 6.4 71 1011-1082 2-85 (337)
396 3nrc_A Enoyl-[acyl-carrier-pro 78.0 3.1 0.00011 45.1 6.7 75 1007-1081 23-111 (280)
397 2zat_A Dehydrogenase/reductase 78.0 2.4 8.4E-05 45.1 5.9 72 1010-1081 15-99 (260)
398 3tzq_B Short-chain type dehydr 77.9 1.9 6.3E-05 46.7 4.9 72 1010-1081 12-93 (271)
399 3f1l_A Uncharacterized oxidore 77.9 3 0.0001 44.5 6.5 73 1010-1082 13-101 (252)
400 3mm4_A Histidine kinase homolo 77.9 8.8 0.0003 39.3 9.9 58 1073-1130 119-184 (206)
401 3rc1_A Sugar 3-ketoreductase; 77.9 4.2 0.00014 45.8 8.0 124 1010-1142 28-164 (350)
402 1zem_A Xylitol dehydrogenase; 77.8 2 7E-05 46.0 5.2 72 1010-1081 8-92 (262)
403 1gy8_A UDP-galactose 4-epimera 77.8 2.8 9.6E-05 47.2 6.6 72 1011-1082 4-102 (397)
404 2nac_A NAD-dependent formate d 77.8 2 6.8E-05 49.8 5.4 86 1010-1103 192-279 (393)
405 1b8p_A Protein (malate dehydro 77.7 2.4 8.1E-05 47.7 5.9 119 1010-1130 6-161 (329)
406 1xg5_A ARPG836; short chain de 77.7 2.4 8.1E-05 45.7 5.7 73 1010-1082 33-120 (279)
407 3kcn_A Adenylate cyclase homol 77.7 9.7 0.00033 36.3 9.6 101 1032-1133 4-112 (151)
408 3phh_A Shikimate dehydrogenase 77.6 2.1 7.3E-05 47.1 5.3 66 1009-1084 118-183 (269)
409 2qq5_A DHRS1, dehydrogenase/re 77.6 1.9 6.5E-05 46.1 4.8 72 1010-1081 6-91 (260)
410 3i42_A Response regulator rece 77.5 5.7 0.00019 36.5 7.6 99 1034-1133 5-111 (127)
411 1vl8_A Gluconate 5-dehydrogena 77.4 2.7 9.2E-05 45.3 6.0 72 1010-1081 22-107 (267)
412 3c3g_A Alpha/beta peptide with 77.4 2.6 8.8E-05 31.5 3.8 27 286-312 4-30 (33)
413 1kew_A RMLB;, DTDP-D-glucose 4 77.4 1.7 5.7E-05 48.4 4.5 71 1012-1082 3-82 (361)
414 3cfy_A Putative LUXO repressor 77.4 12 0.00041 35.1 10.0 99 1034-1133 6-111 (137)
415 2b4q_A Rhamnolipids biosynthes 77.3 1.4 4.9E-05 47.8 3.9 73 1010-1082 30-114 (276)
416 3lte_A Response regulator; str 77.3 11 0.00038 34.6 9.6 101 1032-1133 6-114 (132)
417 3rwb_A TPLDH, pyridoxal 4-dehy 77.3 2.1 7.1E-05 45.6 5.0 73 1010-1082 7-89 (247)
418 4f6c_A AUSA reductase domain p 77.3 0.9 3.1E-05 52.3 2.3 71 1010-1082 70-159 (427)
419 2p4h_X Vestitone reductase; NA 77.2 1 3.5E-05 49.1 2.7 70 1011-1081 3-82 (322)
420 1zgz_A Torcad operon transcrip 77.2 15 0.0005 33.3 10.2 98 1034-1133 4-108 (122)
421 3ftp_A 3-oxoacyl-[acyl-carrier 77.1 2.7 9.2E-05 45.5 5.9 72 1010-1081 29-113 (270)
422 3grp_A 3-oxoacyl-(acyl carrier 77.1 2.2 7.7E-05 46.0 5.3 73 1010-1082 28-110 (266)
423 3v8b_A Putative dehydrogenase, 77.0 2.2 7.6E-05 46.5 5.3 72 1010-1081 29-113 (283)
424 1oju_A MDH, malate dehydrogena 77.0 4.6 0.00016 44.8 7.9 91 1011-1108 2-119 (294)
425 1ae1_A Tropinone reductase-I; 77.0 2.2 7.7E-05 46.0 5.3 72 1010-1081 22-107 (273)
426 3f6p_A Transcriptional regulat 76.9 20 0.00069 32.6 11.2 99 1033-1133 3-108 (120)
427 1ez4_A Lactate dehydrogenase; 76.9 6.5 0.00022 44.1 9.1 109 1010-1127 6-145 (318)
428 2gdz_A NAD+-dependent 15-hydro 76.9 2.2 7.5E-05 45.7 5.1 73 1010-1082 8-95 (267)
429 1spx_A Short-chain reductase f 76.8 1.8 6.1E-05 46.7 4.4 72 1010-1081 7-94 (278)
430 4hkt_A Inositol 2-dehydrogenas 76.8 6.3 0.00022 43.7 9.0 123 1010-1142 4-138 (331)
431 1mld_A Malate dehydrogenase; o 76.8 4.2 0.00014 45.5 7.5 114 1011-1129 2-147 (314)
432 1x1t_A D(-)-3-hydroxybutyrate 76.8 2.6 9E-05 45.0 5.7 72 1010-1081 5-91 (260)
433 2ph5_A Homospermidine synthase 76.8 2.2 7.5E-05 50.6 5.4 91 1007-1099 11-108 (480)
434 2ydy_A Methionine adenosyltran 76.7 1 3.5E-05 49.1 2.5 65 1010-1082 3-69 (315)
435 3tl2_A Malate dehydrogenase; c 76.6 8 0.00027 43.3 9.7 94 1009-1109 8-129 (315)
436 2zay_A Response regulator rece 76.4 5.9 0.0002 37.4 7.5 69 1065-1133 44-117 (147)
437 3zv4_A CIS-2,3-dihydrobiphenyl 76.4 2.3 8E-05 46.2 5.2 72 1010-1081 6-87 (281)
438 3heb_A Response regulator rece 76.4 14 0.00049 35.0 10.4 101 1032-1133 4-124 (152)
439 2ew8_A (S)-1-phenylethanol deh 76.3 3.1 0.00011 44.1 6.1 72 1010-1081 8-90 (249)
440 2oxj_A Hybrid alpha/beta pepti 76.3 2.9 9.8E-05 31.5 3.8 27 286-312 5-31 (34)
441 3don_A Shikimate dehydrogenase 76.3 1.8 6E-05 47.9 4.2 108 1009-1123 117-229 (277)
442 4dqx_A Probable oxidoreductase 76.3 2.5 8.5E-05 46.0 5.4 73 1010-1082 28-110 (277)
443 3euw_A MYO-inositol dehydrogen 76.2 6.8 0.00023 43.7 9.1 124 1010-1142 5-140 (344)
444 2rhc_B Actinorhodin polyketide 76.2 3.6 0.00012 44.5 6.7 72 1010-1081 23-107 (277)
445 4dgs_A Dehydrogenase; structur 76.2 12 0.00042 42.3 11.2 82 1010-1104 172-255 (340)
446 3ldh_A Lactate dehydrogenase; 76.0 8 0.00027 43.7 9.6 97 1008-1110 20-141 (330)
447 2yjz_A Metalloreductase steap4 77.9 0.54 1.9E-05 49.2 0.0 66 1010-1085 20-85 (201)
448 3q2i_A Dehydrogenase; rossmann 76.0 7.3 0.00025 43.7 9.3 124 1009-1142 13-150 (354)
449 3op4_A 3-oxoacyl-[acyl-carrier 75.9 2.4 8.2E-05 45.1 5.1 73 1010-1082 10-92 (248)
450 3gaf_A 7-alpha-hydroxysteroid 75.7 2.3 7.9E-05 45.5 4.9 72 1010-1081 13-97 (256)
451 1t2d_A LDH-P, L-lactate dehydr 75.7 6.5 0.00022 44.1 8.8 93 1010-1110 5-129 (322)
452 3fpf_A Mtnas, putative unchara 75.7 6.3 0.00021 44.0 8.4 95 1009-1109 123-224 (298)
453 1oaa_A Sepiapterin reductase; 75.6 2.8 9.7E-05 44.6 5.6 60 1010-1069 7-78 (259)
454 2pl1_A Transcriptional regulat 75.6 17 0.00059 32.7 10.3 99 1034-1133 2-107 (121)
455 3tjr_A Short chain dehydrogena 75.5 2.8 9.7E-05 46.0 5.7 73 1010-1082 32-117 (301)
456 2ph3_A 3-oxoacyl-[acyl carrier 75.5 2.8 9.6E-05 43.8 5.4 72 1011-1082 3-89 (245)
457 2d0i_A Dehydrogenase; structur 75.5 2.5 8.6E-05 47.7 5.3 65 1010-1084 147-211 (333)
458 3o26_A Salutaridine reductase; 75.5 2 6.9E-05 46.5 4.4 74 1009-1082 12-100 (311)
459 1p6q_A CHEY2; chemotaxis, sign 75.5 15 0.00053 33.5 10.0 101 1033-1133 7-116 (129)
460 1yzh_A TRNA (guanine-N(7)-)-me 75.4 15 0.0005 37.8 10.8 104 1015-1122 50-175 (214)
461 3sju_A Keto reductase; short-c 75.4 2.6 8.8E-05 45.8 5.2 72 1010-1081 25-109 (279)
462 3tfo_A Putative 3-oxoacyl-(acy 75.4 2.2 7.5E-05 46.2 4.7 72 1010-1081 5-89 (264)
463 3lf2_A Short chain oxidoreduct 75.4 2.6 9E-05 45.2 5.2 73 1010-1082 9-96 (265)
464 3gvx_A Glycerate dehydrogenase 75.3 3 0.0001 46.3 5.8 82 1010-1104 123-206 (290)
465 3e9m_A Oxidoreductase, GFO/IDH 75.3 5.6 0.00019 44.3 8.1 125 1010-1142 6-142 (330)
466 4hb9_A Similarities with proba 75.3 1.3 4.3E-05 49.8 2.8 33 1011-1043 3-35 (412)
467 3ba1_A HPPR, hydroxyphenylpyru 75.3 2.5 8.5E-05 47.8 5.2 82 1010-1104 165-248 (333)
468 3tl3_A Short-chain type dehydr 75.2 2.6 8.8E-05 45.0 5.1 73 1010-1082 10-88 (257)
469 1gee_A Glucose 1-dehydrogenase 75.1 2.5 8.5E-05 44.8 4.9 73 1010-1082 8-94 (261)
470 2egg_A AROE, shikimate 5-dehyd 75.0 5.1 0.00017 44.4 7.6 111 1010-1123 142-259 (297)
471 2uvd_A 3-oxoacyl-(acyl-carrier 75.0 3.7 0.00013 43.4 6.2 73 1010-1082 5-91 (246)
472 3c3f_A Alpha/beta peptide with 74.9 3.3 0.00011 31.1 3.8 27 286-312 5-31 (34)
473 2bd0_A Sepiapterin reductase; 74.8 2.5 8.6E-05 44.3 4.8 73 1010-1082 3-95 (244)
474 1y81_A Conserved hypothetical 74.7 1.7 5.8E-05 42.8 3.2 104 1009-1128 14-123 (138)
475 1iz0_A Quinone oxidoreductase; 74.7 4.6 0.00016 44.2 7.0 72 1009-1084 126-199 (302)
476 2yxd_A Probable cobalt-precorr 74.7 5.9 0.0002 38.9 7.3 98 1011-1120 38-148 (183)
477 1mvo_A PHOP response regulator 74.7 17 0.00059 33.5 10.2 100 1033-1133 4-110 (136)
478 2xxj_A L-LDH, L-lactate dehydr 74.7 4 0.00014 45.6 6.6 108 1011-1127 2-140 (310)
479 3mog_A Probable 3-hydroxybutyr 74.7 11 0.00037 44.8 10.7 90 1010-1106 6-118 (483)
480 2yq5_A D-isomer specific 2-hyd 74.6 9.7 0.00033 43.2 9.9 85 1009-1105 148-234 (343)
481 1yj8_A Glycerol-3-phosphate de 74.5 2.4 8.2E-05 48.2 4.9 67 1011-1084 23-114 (375)
482 1pl8_A Human sorbitol dehydrog 74.5 9.6 0.00033 42.7 9.8 92 1009-1105 172-271 (356)
483 3ezl_A Acetoacetyl-COA reducta 74.5 2.6 8.9E-05 44.7 4.9 75 1008-1082 12-100 (256)
484 1udb_A Epimerase, UDP-galactos 74.5 3.4 0.00012 45.4 6.0 72 1011-1082 2-82 (338)
485 4ibo_A Gluconate dehydrogenase 74.4 1.9 6.3E-05 46.8 3.7 73 1010-1082 27-112 (271)
486 3d0o_A L-LDH 1, L-lactate dehy 74.4 9.4 0.00032 42.6 9.6 109 1010-1127 7-147 (317)
487 1db3_A GDP-mannose 4,6-dehydra 74.3 1.9 6.4E-05 48.1 3.9 71 1011-1081 3-86 (372)
488 2glx_A 1,5-anhydro-D-fructose 74.3 4.5 0.00015 44.8 7.0 124 1011-1142 2-137 (332)
489 4hy3_A Phosphoglycerate oxidor 74.3 4 0.00014 46.9 6.6 87 1010-1106 177-265 (365)
490 3c7a_A Octopine dehydrogenase; 74.3 4.7 0.00016 46.1 7.3 71 1011-1085 4-94 (404)
491 3oid_A Enoyl-[acyl-carrier-pro 74.3 3 0.0001 44.6 5.4 72 1010-1081 5-90 (258)
492 3uko_A Alcohol dehydrogenase c 74.3 9.8 0.00033 43.1 9.9 94 1009-1105 194-293 (378)
493 1uay_A Type II 3-hydroxyacyl-C 74.2 2.5 8.5E-05 44.1 4.6 66 1010-1081 3-74 (242)
494 3ctm_A Carbonyl reductase; alc 74.2 2.3 7.7E-05 45.8 4.3 72 1010-1081 35-119 (279)
495 3uf0_A Short-chain dehydrogena 74.2 4.3 0.00015 43.9 6.6 71 1010-1081 32-114 (273)
496 3klo_A Transcriptional regulat 74.2 6.9 0.00024 40.4 8.0 102 1033-1134 8-119 (225)
497 1a04_A Nitrate/nitrite respons 74.2 12 0.00042 38.0 9.8 100 1033-1133 6-114 (215)
498 4egf_A L-xylulose reductase; s 74.1 2.9 9.9E-05 45.0 5.2 72 1010-1081 21-106 (266)
499 1kgs_A DRRD, DNA binding respo 73.9 10 0.00035 38.7 9.2 100 1033-1133 3-109 (225)
500 2r25_B Osmosensing histidine p 73.9 21 0.00072 33.2 10.6 107 1031-1137 1-120 (133)
No 1
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=99.86 E-value=2.6e-21 Score=192.90 Aligned_cols=139 Identities=23% Similarity=0.294 Sum_probs=133.8
Q ss_pred ccccccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1004 ETDDLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1004 ~~~~l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
+.+++++|++|||+|++|+.+++.|.+.|++|+++|.|+++++.+++.|+++++||++++++|+++++++|+++|+++++
T Consensus 2 ~~~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 2 NAVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp CCCCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSC
T ss_pred CcccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHHHh
Q 001096 1084 PGANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQ 1142 (1158)
Q Consensus 1084 d~~Nl~i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~ 1142 (1158)
+..|..++..+|+++|+.+||+|+++.++.+.|+++|+|.||+|+..++..|++++.+|
T Consensus 82 ~~~n~~~~~~a~~~~~~~~iiar~~~~~~~~~l~~~G~d~vi~p~~~~a~~i~~~l~~~ 140 (140)
T 3fwz_A 82 GYEAGEIVASARAKNPDIEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETP 140 (140)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEEESSHHHHHHHHHTTCSEEEEHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEECCHHHHHHHHHCCCCEEECchHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999999999999999999999999999988765
No 2
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A
Probab=99.81 E-value=4.6e-20 Score=212.28 Aligned_cols=296 Identities=17% Similarity=0.156 Sum_probs=214.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCChhHH----Hhchh--hHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHhhccccC
Q 001096 651 HGTKAIAEFGVVFLLFNIGLELSVERL----SSMKK--YVFGLGSAQVLVTAVVVGLVAHFVSGLPGPASIVIGNGLALS 724 (1158)
Q Consensus 651 ~~l~~LaeLGLi~LLF~aGLelDl~~L----rr~~k--~il~Lai~gvllt~iivglll~~llGls~~~AlllGaiLs~T 724 (1158)
.....+.+-.+++++|.+|+|+|.+.+ ++.++ .....++.|+++|+++ ++.++...+.+...+.+...|
T Consensus 58 ~l~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~i-----y~~~~~~~~~~~~gw~ip~AT 132 (388)
T 1zcd_A 58 NMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALL-----YLAFNYADPITREGWAIPAAT 132 (388)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHH-----HGGGCCSSTTHHHHTSSSSCC
T ss_pred cHHHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHH-----HHHHhcCChhhhhhhHHHHHH
Confidence 345788899999999999999999877 55555 3566788888888643 455677667677888888999
Q ss_pred cHHHHHHHHHhcCCCCchh-hHHHHHHHhhhhhHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001096 725 STAVVLQVLQERGESTSRH-GRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGVAAVKAAVAITAIIAG 803 (1158)
Q Consensus 725 S~aVVv~iL~el~ll~s~~-GrlaLs~sllnDi~aIvll~ll~~la~~~s~g~~~~~~i~~~L~l~~l~iil~ivl~~li 803 (1158)
+.+..+.++..++...+.. +..+++.+++||+.+|++++++.. ++..+. .+. . .++.+++
T Consensus 133 dIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt-------~~~~~~----~l~-------~-~~~~~~~ 193 (388)
T 1zcd_A 133 DIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT-------NDLSMA----SLG-------V-AAVAIAV 193 (388)
T ss_dssp CHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC-------CCCCHH----HHH-------H-HHHHHHH
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCccHH----HHH-------H-HHHHHHH
Confidence 9999999999877655544 588999999999999999987621 122221 111 0 0111111
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHhhccc-----chhHHHHHhHHhHH-HHH
Q 001096 804 GRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAET-----EFSLQVESDIAPYR-GLL 877 (1158)
Q Consensus 804 g~~llr~ll~~i~~~~~~el~~l~iL~v~l~~a~lae~lGls~vLGAFvAGLiL~n~-----~~~~~l~e~l~~~~-~~f 877 (1158)
..++ ++. ..+.......+ .+.+++.++..|+|+.+|+|++|+++|.. +..+++++.++++. .++
T Consensus 194 ~~~l-----~r~---~v~~~~~y~~l--gl~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l~p~v~~~i 263 (388)
T 1zcd_A 194 LAVL-----NLC---GARRTGVYILV--GVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLI 263 (388)
T ss_dssp HHHH-----HHT---TCCCTHHHHHH--HHHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHHHHHHHHTH
T ss_pred HHHH-----HHh---cchhHHHHHHH--HHHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHH
Confidence 1111 111 11112122212 33445667999999999999999999974 35678999999985 688
Q ss_pred HHHH-HHHHhcccChhh---hhhhhhhHHHHHHHHHHHHHHHHHHHHHhc----------CCChhhHHHHhhhccccchh
Q 001096 878 LGLF-FMTVGMSIDPKL---LLSNFPVITGALGLLIGGKTILVALVGRLF----------GVSVISAIRTGLLLAPGGEF 943 (1158)
Q Consensus 878 lPlF-FvliGm~idl~~---L~~~~~~vllllvl~ll~K~l~v~l~~~~~----------g~~~real~lgL~La~rG~v 943 (1158)
+|+| |+..|+++|... +.+ +..+.+++..+++|+++++..++.. |++|++...+|+.++.++++
T Consensus 264 lPlFaFanaGv~l~~~~~~~l~~--~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~gigftm 341 (388)
T 1zcd_A 264 LPLFAFANAGVSLQGVTLDGLTS--ILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTM 341 (388)
T ss_dssp HHHHHHHHCCCCCSSSCCCTHHH--HSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTTCCHHH
T ss_pred HHHHHHHhcCeeecccchhhccC--hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhccchHH
Confidence 9999 999999998742 222 1222444455889999966666665 89999999999999999999
Q ss_pred hHHHHHHHHhhcc--chhhhHHHHHHHHHHHHHhHHHHHhh
Q 001096 944 AFVAFGEAVNQGI--MSSQLSSLLFLLVGISMALTPWLAAG 982 (1158)
Q Consensus 944 alvla~ia~~~gi--Is~elfsiLvlvVVlS~IitPlL~~~ 982 (1158)
+++++..+++.+. +.++.+..+++.+++|.+++|++.++
T Consensus 342 sL~Ia~laf~~~~~~~~~~ak~~il~~s~~s~i~g~~~L~~ 382 (388)
T 1zcd_A 342 SIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRV 382 (388)
T ss_dssp HHHHHHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTT
T ss_pred HHHHHHHhccCCchhhHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998875 34566888888888899999887653
No 3
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=99.80 E-value=8.9e-19 Score=212.17 Aligned_cols=139 Identities=19% Similarity=0.172 Sum_probs=130.5
Q ss_pred cccccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC-CCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1005 TDDLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1005 ~~~l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~-g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
....++|++|||+|++|+.+++.|.+.|++|++||.|+++++.+++. |+++++||++++++|+++|+++|+.+|+ +.+
T Consensus 123 ~~~~~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~-t~~ 201 (565)
T 4gx0_A 123 PDDTRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA-NLS 201 (565)
T ss_dssp CTTCCSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE-CSC
T ss_pred ccccCCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE-eCC
Confidence 35678999999999999999999999999999999999999999998 9999999999999999999999999987 788
Q ss_pred chhhHHHHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHHHhhhh
Q 001096 1084 PGANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQVIH 1145 (1158)
Q Consensus 1084 d~~Nl~i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~~i~ 1145 (1158)
|+.|+.+++.+|+++ +.+|++|++++++.+.|+++|+|+||+|+...+..|++.+..|...
T Consensus 202 D~~n~~~~~~ar~~~-~~~iiar~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~p~~~ 262 (565)
T 4gx0_A 202 DPDNANLCLTVRSLC-QTPIIAVVKEPVHGELLRLAGANQVVPLTRILGRYLGIRATTCGAL 262 (565)
T ss_dssp HHHHHHHHHHHHTTC-CCCEEEECSSGGGHHHHHHHTCSEEECHHHHHHHHHHHHHHC----
T ss_pred cHHHHHHHHHHHHhc-CceEEEEECCHHHHHHHHHcCCCEEEChHHHHHHHHHHHhcccccc
Confidence 899999999999999 9999999999999999999999999999999999999999999764
No 4
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=99.79 E-value=4.6e-19 Score=207.37 Aligned_cols=135 Identities=30% Similarity=0.506 Sum_probs=131.9
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
++|+||||+|++|+.+++.|.+.|++|++||.|+++++.+++.|+++++||++++++|+++|+++|++||++++|++.|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHHHhh
Q 001096 1089 RTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQV 1143 (1158)
Q Consensus 1089 ~i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~~ 1143 (1158)
.++..+|+++|+++||+|++|.++...|+++|||.||+|+..+|..|+++++...
T Consensus 84 ~i~~~ar~~~p~~~Iiara~~~~~~~~L~~~Gad~Vi~~~~~~a~~la~~~L~~l 138 (413)
T 3l9w_A 84 QLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESL 138 (413)
T ss_dssp HHHHHHHHHCTTCEEEEEESSHHHHHHHHHTTCSSCEETTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCeEEEEECCHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999999764
No 5
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=99.78 E-value=6.1e-19 Score=177.82 Aligned_cols=145 Identities=21% Similarity=0.203 Sum_probs=132.3
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCc-hHHHHh---hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRS-DRVAIG---RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~-~~v~~l---~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
++|++|||+|++|+.+++.|.+.|++|+++|+|+ ++.+.+ ...|+.++.||++++++|+++++++|++||+++++|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 5789999999999999999999999999999984 544444 356899999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHHHhhh-hhhhhHHHH
Q 001096 1085 GANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQVI-HDYQREKVF 1153 (1158)
Q Consensus 1085 ~~Nl~i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~~i-~~~~~~~vf 1153 (1158)
+.|+.++..+|+++|+.+|+++++++++.+.|+++|+|.|+.|+..++..|++.+..+.+ .+.+++.+|
T Consensus 83 ~~n~~~~~~a~~~~~~~~ii~~~~~~~~~~~l~~~G~~~vi~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 152 (153)
T 1id1_A 83 ADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLL 152 (153)
T ss_dssp HHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHHTTCCSEEECHHHHHHHHHHHHHTTCCCCHHHHHHTTB
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEcHHHHHHHHHHHHHhCCCCcHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999987755 666666665
No 6
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=99.78 E-value=7.7e-20 Score=207.46 Aligned_cols=138 Identities=16% Similarity=0.187 Sum_probs=132.7
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
++|++|||+|++|+.+++.|.+.|+ |+++|.|+++++ +++.|+++++||++|+++|+++|+++|+.++++++||+.|+
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n~ 192 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETI 192 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHHH
Confidence 6799999999999999999999999 999999999999 88899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHHHhhhhhhh
Q 001096 1089 RTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQVIHDYQ 1148 (1158)
Q Consensus 1089 ~i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~~i~~~~ 1148 (1158)
.++..+|+++|+.+|++|++|+++.+.++++|+|.||+|+..++..|++.+..|...++.
T Consensus 193 ~~~~~ar~~~~~~~iiar~~~~~~~~~l~~~G~d~vi~~~~~~~~~l~~~~~~~~~~~~~ 252 (336)
T 1lnq_A 193 HCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDDGYEAMFV 252 (336)
T ss_dssp HHHHHHHTTCTTSEEEEECSSGGGHHHHHHTTCSEEECHHHHHHHHHHHTSSCSHHHHHH
T ss_pred HHHHHHHHHCCCCeEEEEECCHHHHHHHHHcCCCEEEChhHhHHHHHHHHHhCccHHHHH
Confidence 999999999999999999999999999999999999999999999999999999876665
No 7
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=99.76 E-value=5e-18 Score=168.28 Aligned_cols=134 Identities=17% Similarity=0.139 Sum_probs=128.8
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~ 1089 (1158)
+|++|+|+|++|+.+++.|.+.|++|+++|.|+++++.+++.|.+++.||++++++|+++++++++++|++++++..|+.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~ 86 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFNLK 86 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHHHH
Confidence 58999999999999999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHHHhhh
Q 001096 1090 TVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQVI 1144 (1158)
Q Consensus 1090 i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~~i 1144 (1158)
++..+|+.+ ..+|++++++.++.+.|+++|+|+|++|+..++..+++++.+|..
T Consensus 87 ~~~~a~~~~-~~~iia~~~~~~~~~~l~~~G~~~vi~p~~~~~~~l~~~i~~p~~ 140 (141)
T 3llv_A 87 ILKALRSVS-DVYAIVRVSSPKKKEEFEEAGANLVVLVADAVKQAFMDKIKKMET 140 (141)
T ss_dssp HHHHHHHHC-CCCEEEEESCGGGHHHHHHTTCSEEEEHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhC-CceEEEEEcChhHHHHHHHcCCCEEECHHHHHHHHHHHHHhCccc
Confidence 999999999 889999999999999999999999999999999999999999864
No 8
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=99.73 E-value=4.8e-18 Score=182.83 Aligned_cols=140 Identities=16% Similarity=0.201 Sum_probs=132.1
Q ss_pred cccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1007 DLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1007 ~l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
..++|++|||+|++|+.+++.|.+.|+ |+++|.|+++++.+. .|+.++.||++++++|+++++++|+.||+++++|+.
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~ 84 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE 84 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHH
Confidence 457899999999999999999999999 999999999998888 889999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHHHhhhhhhh
Q 001096 1087 NYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQVIHDYQ 1148 (1158)
Q Consensus 1087 Nl~i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~~i~~~~ 1148 (1158)
|+.++..+|+++|+++|+++++++++.+.++++|+|.||+|+..++..|++++..|.+.++.
T Consensus 85 n~~~~~~a~~~~~~~~iia~~~~~~~~~~l~~~G~~~vi~p~~~~a~~l~~~~~~~~~~~~~ 146 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDDGYEAMFV 146 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEEECSSGGGHHHHHHHTCSEEECHHHHHHHHHHHTSSCSHHHHHH
T ss_pred HHHHHHHHHHHCCCCeEEEEECCHhHHHHHHHCCCCEEECHHHHHHHHHHHHHcCccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999876665
No 9
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.70 E-value=7.5e-17 Score=166.90 Aligned_cols=143 Identities=16% Similarity=0.150 Sum_probs=134.3
Q ss_pred ccccccccccCCcccHHHHHHHHhhC-CCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhc-CccccCEEEEecCC
Q 001096 1006 DDLQDHIILCGFGRVGQIIAQLLSER-LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKV-GAERACAAAITLDT 1083 (1158)
Q Consensus 1006 ~~l~~hvVIiG~G~vG~~Ia~~L~e~-g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~A-gI~~A~~VIi~t~d 1083 (1158)
+...+|++|+|+|++|..+++.|.+. |++|+++|.|+++++.+++.|..++.||++++++|+++ ++++++.||+++++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 34467999999999999999999999 99999999999999999999999999999999999999 99999999999999
Q ss_pred chhhHHHHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHHHhhhhhhh
Q 001096 1084 PGANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQVIHDYQ 1148 (1158)
Q Consensus 1084 d~~Nl~i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~~i~~~~ 1148 (1158)
+..|..++..+++.+|+.+|++++++.++.+.++++|++.|+.|...++..|++.++.+....+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~G~~~vi~p~~~~a~~l~~~~~~~~~~~~~ 180 (183)
T 3c85_A 116 HQGNQTALEQLQRRNYKGQIAAIAEYPDQLEGLLESGVDAAFNIYSEAGSGFARHVCKQLEPQFT 180 (183)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHTCSEEEEHHHHHHHHHHHHHHHHHCCCCC
T ss_pred hHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEchHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999988765543
No 10
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=99.70 E-value=2.8e-17 Score=175.19 Aligned_cols=138 Identities=15% Similarity=0.126 Sum_probs=130.7
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhh-hCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHH
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~-~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~ 1089 (1158)
+++|||+|++|+.+++.|.+.|++|+++|.|+++++.+. ..|..+++||++++++|+++++++|+++|+++++|..|..
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~ 81 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVNLF 81 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHHHH
Confidence 589999999999999999999999999999999998865 4689999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHHHhhhhhhh
Q 001096 1090 TVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQVIHDYQ 1148 (1158)
Q Consensus 1090 i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~~i~~~~ 1148 (1158)
++..+|+++|..+|++|++++++.+.|+++|+|.||+|+..++..|++.+..|.+.++.
T Consensus 82 ~~~~a~~~~~~~~iia~~~~~~~~~~l~~~G~d~vi~p~~~~~~~l~~~~~~~~~~~~~ 140 (218)
T 3l4b_C 82 IAQLVMKDFGVKRVVSLVNDPGNMEIFKKMGITTVLNLTTLITNTVEALIFPDEFSSII 140 (218)
T ss_dssp HHHHHHHTSCCCEEEECCCSGGGHHHHHHHTCEECCCHHHHHHHHHHHHHCTTSCEECS
T ss_pred HHHHHHHHcCCCeEEEEEeCcchHHHHHHCCCCEEECHHHHHHHHHHHHhccCCceEEE
Confidence 99999999999999999999999999999999999999999999999999988776553
No 11
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=99.67 E-value=4.4e-17 Score=193.19 Aligned_cols=137 Identities=20% Similarity=0.172 Sum_probs=126.7
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-CCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHH
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~ 1089 (1158)
|+||||+|++|+.+++.|.+.|++|++||.|+++++.+.+ .++.+++||++++++|++||+++|+++|++|++|+.|+.
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De~Nl~ 84 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDETNMA 84 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChHHHHH
Confidence 6999999999999999999999999999999999998864 699999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCceEEEEecChhhHHHHH------HCCCCeeecCCcHHHHHHHHHHHHhhhhhh
Q 001096 1090 TVWALSKYFPNVKTFVRAHDIDHGLNLE------KAGATAVVPETLEPSLQLAAAVLAQVIHDY 1147 (1158)
Q Consensus 1090 i~l~ar~l~p~~~IIara~d~e~~~~L~------~aGAd~VI~p~~~a~~~LA~~vl~~~i~~~ 1147 (1158)
+|+.+|+++|..++++|++++++....+ ..|+|.+|+|+..++..+.+.+..|...+.
T Consensus 85 ~~~~Ak~~~~~~~~iar~~~~~~~~~~~~l~~~~~~giD~iIsPe~~~a~~I~~~i~~p~~~~~ 148 (461)
T 4g65_A 85 ACQVAFTLFNTPNRIARIRSPQYLAQKEALFKSGAIPVDHLIAPEELVTSYIERLIQYPGALQV 148 (461)
T ss_dssp HHHHHHHHHCCSSEEEECCCHHHHTTHHHHTTTSSSCCSEEECHHHHHHHHHHHHHTSTTCSEE
T ss_pred HHHHHHHhcCCccceeEeccchhhhhhhhhhhcccCCcceeecHHHHHHHHHHHhccCCCeEEE
Confidence 9999999999999999999998754332 379999999999999999999988876544
No 12
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=99.66 E-value=8e-17 Score=195.05 Aligned_cols=134 Identities=23% Similarity=0.316 Sum_probs=124.9
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~ 1089 (1158)
+|++|||+|++|+.+++.|.+.|++|++||.|+++++.+. ++++||++|+++|+++|+++|+.+|++++||+.|+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~----~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~ni~ 424 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH----VVVYGDATVGQTLRQAGIDRASGIIVTTNDDSTNIF 424 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS----CEEESCSSSSTHHHHHTTTSCSEEEECCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC----CEEEeCCCCHHHHHhcCccccCEEEEECCCchHHHH
Confidence 8999999999999999999999999999999999876553 899999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHHHhhhhhh
Q 001096 1090 TVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQVIHDY 1147 (1158)
Q Consensus 1090 i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~~i~~~ 1147 (1158)
+++.+|+++|+++||+|++++++.+.++++|+|+||+|+..++..|++.+..+.+..+
T Consensus 425 ~~~~ak~l~~~~~iiar~~~~~~~~~l~~~G~d~vi~p~~~~~~~i~~~~~~~~~~~~ 482 (565)
T 4gx0_A 425 LTLACRHLHSHIRIVARANGEENVDQLYAAGADFVVSNASVGANILGNLLEHKESAFL 482 (565)
T ss_dssp HHHHHHHHCSSSEEEEEESSTTSHHHHHHHTCSEEEEHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEccchHHHHHHHHHhcchhhhhh
Confidence 9999999999999999999999999999999999999999999999999887765544
No 13
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=99.58 E-value=1e-14 Score=143.07 Aligned_cols=137 Identities=18% Similarity=0.251 Sum_probs=128.5
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc-hhhH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP-GANY 1088 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd-~~Nl 1088 (1158)
++++|+|+|.+|..+++.|.+.|++|+++|.++++.+.+++.+..++.||.++++.|++++++++|.+|.+++++ ..|.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~ 86 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAST 86 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchHHHH
Confidence 479999999999999999999999999999999999888878888899999999999999999999999999987 8899
Q ss_pred HHHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHHHhhhhhh
Q 001096 1089 RTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQVIHDY 1147 (1158)
Q Consensus 1089 ~i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~~i~~~ 1147 (1158)
.++..+++.+|. ++++++++..+.+.++++|++.|+.|...++..|+++++.|...++
T Consensus 87 ~~~~~~~~~~~~-~ii~~~~~~~~~~~l~~~g~~~vi~p~~~~~~~l~~~~~~~~~~~~ 144 (144)
T 2hmt_A 87 LTTLLLKELDIP-NIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDENVLNY 144 (144)
T ss_dssp HHHHHHHHTTCS-EEEEECCSHHHHHHHHHHTCSEEECHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC-eEEEEeCCHHHHHHHHHcCCCEEECccHHHHHHHHHHHhhcccccC
Confidence 999999999987 9999999999999999999999999999999999999999987653
No 14
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=99.52 E-value=4.8e-14 Score=137.85 Aligned_cols=134 Identities=27% Similarity=0.280 Sum_probs=122.3
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-CCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
.+++|+|+|.+|..+++.|.+.|++|+++|.++++.+.+.+ .|..++.||.++++.|.+++++++|.|+++++++..|.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~ 84 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVNL 84 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHHH
Confidence 36899999999999999999999999999999999887764 48889999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHHHhhh
Q 001096 1089 RTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQVI 1144 (1158)
Q Consensus 1089 ~i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~~i 1144 (1158)
.++..++..++. +++++.++.++.+.++++|++.|+.|+...+..+++.+..|.+
T Consensus 85 ~~~~~~~~~~~~-~ii~~~~~~~~~~~l~~~g~~~v~~p~~~~~~~~~~~~~~p~~ 139 (140)
T 1lss_A 85 MSSLLAKSYGIN-KTIARISEIEYKDVFERLGVDVVVSPELIAANYIEKLIERPGI 139 (140)
T ss_dssp HHHHHHHHTTCC-CEEEECSSTTHHHHHHHTTCSEEECHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHcCCC-EEEEEecCHhHHHHHHHcCCCEEECHHHHHHHHHHHHhccCCC
Confidence 999999998875 8999999999999999999999999999999999999888754
No 15
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=99.51 E-value=2.9e-14 Score=169.04 Aligned_cols=137 Identities=14% Similarity=0.098 Sum_probs=126.8
Q ss_pred ccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC--CCCEEEccCCCHHHHHhcCccccCEEEEecCCch
Q 001096 1008 LQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL--DLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1008 l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~--g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
..++++|+|+|++|..+++.|.+ +++|++||.|+++++.+.+. +..+++||++|++.|+++|++++|++|++|+||+
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~De 312 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQ-TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTNEDE 312 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCSCHH
T ss_pred cccEEEEEcchHHHHHHHHHhhh-cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcccCcH
Confidence 35689999999999999999965 58999999999999887553 6789999999999999999999999999999999
Q ss_pred hhHHHHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHHHhhhhh
Q 001096 1086 ANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQVIHD 1146 (1158)
Q Consensus 1086 ~Nl~i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~~i~~ 1146 (1158)
.|+.+++.+|+++.. ++|++++++++.+.+++.|+|.+|+|...++..+.+++..+.+..
T Consensus 313 ~Ni~~~llAk~~gv~-kvIa~vn~~~~~~l~~~~gid~visp~~~~a~~I~~~i~~~~v~~ 372 (461)
T 4g65_A 313 TNIMSAMLAKRMGAK-KVMVLIQRGAYVDLVQGGVIDVAISPQQATISALLTHVRRADIVN 372 (461)
T ss_dssp HHHHHHHHHHHTTCS-EEEEECSCHHHHHHHCSSSSCEEECHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHcCCc-cccccccccchhhhhhccccceeeCHHHHHHHHHHHHhhccccce
Confidence 999999999999875 999999999999999999999999999999999999999886644
No 16
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=99.51 E-value=5.6e-14 Score=141.90 Aligned_cols=132 Identities=19% Similarity=0.182 Sum_probs=123.6
Q ss_pred ccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhh-hCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1008 LQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1008 l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~-~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
...+++|+|+|.+|..+++.|.+.|++|+++|.++++.+.++ ..|..++.||+.+++.|.+++++++++||++++++..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~ 97 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDST 97 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcHH
Confidence 357899999999999999999999999999999999988887 6788899999999999999999999999999999999
Q ss_pred hHHHHHHHHhhCCCceEEEEecChhhHHHHHHCCCCeeecCCcHHHHHHHHHHH
Q 001096 1087 NYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAGATAVVPETLEPSLQLAAAVL 1140 (1158)
Q Consensus 1087 Nl~i~l~ar~l~p~~~IIara~d~e~~~~L~~aGAd~VI~p~~~a~~~LA~~vl 1140 (1158)
|..++..++..+|..++++++++..+.+.++++|++ ++.|...++..|++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~iv~~~~~~~~~~~l~~~G~~-vi~p~~~~a~~l~~~l~ 150 (155)
T 2g1u_A 98 NFFISMNARYMFNVENVIARVYDPEKIKIFEENGIK-TICPAVLMIEKVKEFII 150 (155)
T ss_dssp HHHHHHHHHHTSCCSEEEEECSSGGGHHHHHTTTCE-EECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCeEEEEECCHHHHHHHHHCCCc-EEcHHHHHHHHHHHHHh
Confidence 999999999989999999999999999999999999 99999999998887664
No 17
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel, gating ring, rossman fold, transport, ION trans; 3.10A {Homo sapiens}
Probab=99.35 E-value=1.6e-12 Score=160.82 Aligned_cols=145 Identities=17% Similarity=0.155 Sum_probs=121.5
Q ss_pred ccccccccccCCcccHHH--HHHHHhh-----CCCCEEEEeCCch--HHHHhh---hCCCCEEEccCCCHHHHHhcCccc
Q 001096 1006 DDLQDHIILCGFGRVGQI--IAQLLSE-----RLIPFVALDVRSD--RVAIGR---ALDLPVYFGDAGSREVLHKVGAER 1073 (1158)
Q Consensus 1006 ~~l~~hvVIiG~G~vG~~--Ia~~L~e-----~g~~VvVID~d~~--~v~~l~---~~g~~vi~GDasd~e~L~~AgI~~ 1073 (1158)
...++|+||||+++..+. +.+.|.. .+.+||+++.++. ..+... ..++.++.||++++++|++|++++
T Consensus 50 ~~~k~HIIIcG~~~~~~v~~fL~El~~~~~~~~~~~IVIL~~~~p~~eLe~lL~~~~~~V~fI~Gdat~~e~L~RAgI~~ 129 (798)
T 3naf_A 50 VSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIES 129 (798)
T ss_dssp CCSSEEEEEESCCCHHHHHHHHHHHTCTTSCCCCEEEEEEESSCCCHHHHHHHHHTTTTEEEEECCSSSHHHHHHTTGGG
T ss_pred ccCCCeEEEEcCCCHHHHHHHHHHHHhhcccccCCcEEEEeCCCCcHHHHHHhhcccCceEEEEcCCCCHHHHHhcCHhh
Confidence 457899999999876542 3344332 2358999987542 223222 367899999999999999999999
Q ss_pred cCEEEEecC--------CchhhHHHHHHHHhhCCCceEEEEecChhhHHHHHH------CCCCeeecCCcHHHHHHHHHH
Q 001096 1074 ACAAAITLD--------TPGANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEK------AGATAVVPETLEPSLQLAAAV 1139 (1158)
Q Consensus 1074 A~~VIi~t~--------dd~~Nl~i~l~ar~l~p~~~IIara~d~e~~~~L~~------aGAd~VI~p~~~a~~~LA~~v 1139 (1158)
|++||++.+ +|..|+.+++++|.++|+++|+|++.+.++..+|++ +|||.||.|....+..||+.+
T Consensus 130 A~aVIIla~~~~~d~~~~Da~nIl~vLsar~lnP~i~IIa~~~~~en~~~L~~~~sw~~AGAd~VI~~~el~g~LLAqs~ 209 (798)
T 3naf_A 130 ADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSC 209 (798)
T ss_dssp CSEEEECCCTTCSCHHHHHHHHHHHHHHHHHHSTTCCEEEEESCTTGGGSGGGCTTCCTTTTCEEEEHHHHHHHHHHHHH
T ss_pred CCEEEEECCccccCCccchHHHHHHHHHHHHHCCCCCEEEEECCHhHHHHHHhcccchhcCCCEEEehHHHHHHHHHHHh
Confidence 999999884 578999999999999999999999999999999987 799999999999999999999
Q ss_pred HHhhhhhhhhH
Q 001096 1140 LAQVIHDYQRE 1150 (1158)
Q Consensus 1140 l~~~i~~~~~~ 1150 (1158)
+.|++..++.+
T Consensus 210 l~PGls~~i~~ 220 (798)
T 3naf_A 210 LAQGLSTMLAN 220 (798)
T ss_dssp HSTTHHHHHHH
T ss_pred cCCCHHHHHHH
Confidence 99999998844
No 18
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A
Probab=99.26 E-value=5.7e-12 Score=154.48 Aligned_cols=142 Identities=18% Similarity=0.200 Sum_probs=119.5
Q ss_pred cccccccCCcccHHHH--HHH-Hhh-C---CCCEEEEeCCc--hHHHHh-h--hCCCCEEEccCCCHHHHHhcCccccCE
Q 001096 1009 QDHIILCGFGRVGQII--AQL-LSE-R---LIPFVALDVRS--DRVAIG-R--ALDLPVYFGDAGSREVLHKVGAERACA 1076 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~I--a~~-L~e-~---g~~VvVID~d~--~~v~~l-~--~~g~~vi~GDasd~e~L~~AgI~~A~~ 1076 (1158)
++|+||||+.+.+... .+. +.+ + +.+||+++.++ ...+.+ + ..++.++.||++++++|++|++++|++
T Consensus 3 k~HIIVcG~~~~~sV~~FL~Ef~h~d~~~~~~~VVIL~~~~P~~ELe~lL~~~~~~V~fI~Gdat~~edL~RA~I~~A~a 82 (726)
T 3mt5_A 3 RKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADA 82 (726)
T ss_dssp -CEEEEEESCCHHHHHHHHHHHHHHCTTTTTCEEEEECSSCCCHHHHTTHHHHCSSEEEECCCTTSHHHHHHTTGGGCSE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhccccccCCcEEEEeCCCCCHHHHHHHHhhcCceEEEEeCCCCHHHHHhcChhhcCE
Confidence 6899999999877752 333 332 2 34899999865 233333 2 368899999999999999999999999
Q ss_pred EEEecC--------CchhhHHHHHHHHhhCCCceEEEEecChhhHHHHHH------CCCCeeecCCcHHHHHHHHHHHHh
Q 001096 1077 AAITLD--------TPGANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEK------AGATAVVPETLEPSLQLAAAVLAQ 1142 (1158)
Q Consensus 1077 VIi~t~--------dd~~Nl~i~l~ar~l~p~~~IIara~d~e~~~~L~~------aGAd~VI~p~~~a~~~LA~~vl~~ 1142 (1158)
||++.+ +|..|+.+++++|.++|+++|+|++.+.++..+|++ +|||.||.|....+..||+.++.|
T Consensus 83 VIIlad~~~~d~~~sDa~nIl~vLsar~lnP~i~IVA~~~~~en~~~L~ri~sw~~AGAd~VI~~~el~g~LLAqs~l~P 162 (726)
T 3mt5_A 83 CLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQ 162 (726)
T ss_dssp EEEECCTTCSCHHHHHHHHHHHHHHHHHHCTTSCEEEEESCHHHHGGGGGSTTCCTTTTCEEEEHHHHHHHHHHHHHHST
T ss_pred EEEEcCccccCCcccHHHHHHHHHHHHHhCCCCCEEEEECCHHHHHHHhhccchhhcCCCEEEehHHHHHHHHHHHhcCC
Confidence 999875 588999999999999999999999999999999984 899999999999999999999999
Q ss_pred hhhhhhhH
Q 001096 1143 VIHDYQRE 1150 (1158)
Q Consensus 1143 ~i~~~~~~ 1150 (1158)
++..++.+
T Consensus 163 Glst~i~~ 170 (726)
T 3mt5_A 163 GLSTMLAN 170 (726)
T ss_dssp THHHHHHT
T ss_pred CHHHHHHH
Confidence 99888743
No 19
>4hpf_A Potassium channel subfamily U member 1; PH-gated, membrane protein, transport Pro; 3.40A {Homo sapiens}
Probab=98.84 E-value=3.1e-09 Score=132.61 Aligned_cols=141 Identities=16% Similarity=0.147 Sum_probs=112.8
Q ss_pred cccccccCCcccHHHHHHHHhh--------CCCCEEEEeCCchHHH--H-hh--hCCCCEEEccCCCHHHHHhcCccccC
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSE--------RLIPFVALDVRSDRVA--I-GR--ALDLPVYFGDAGSREVLHKVGAERAC 1075 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e--------~g~~VvVID~d~~~v~--~-l~--~~g~~vi~GDasd~e~L~~AgI~~A~ 1075 (1158)
++|+||||+++.++ +...|++ .+.+||++..++...+ . ++ ...+.++.||++++++|++|++++|+
T Consensus 3 k~HivvcG~~~~~~-l~~fL~ef~~~~~~~~~~~vVil~~~~p~~el~~~l~~~~~~v~~i~Gs~~~~~dL~ra~i~~A~ 81 (722)
T 4hpf_A 3 KKFIVVCGNITVDS-VTAFLRNFLRDKSGEINTEIVFLGETPPSLELETIFKCYLAYTTFISGSAMKWEDLRRVAVESAE 81 (722)
T ss_dssp CCEEEEESCCCHHH-HHHHHTTC--------CCEEECCBSCC------CCCCTTTTSEECCBCCSSCHHHHHHHTGGGSS
T ss_pred CCEEEEECCCCHHH-HHHHHHHHhhhhhhcCCCeEEEEeCCCCCHHHHHHHhhhCceEEEEEcCCCCHHHHHhcCcccCC
Confidence 57999999988764 4444443 2457888866543322 1 11 12345678999999999999999999
Q ss_pred EEEEecC--------CchhhHHHHHHHHhhCCCceEEEEecChhhHHHHHH------CCCCeeecCCcHHHHHHHHHHHH
Q 001096 1076 AAAITLD--------TPGANYRTVWALSKYFPNVKTFVRAHDIDHGLNLEK------AGATAVVPETLEPSLQLAAAVLA 1141 (1158)
Q Consensus 1076 ~VIi~t~--------dd~~Nl~i~l~ar~l~p~~~IIara~d~e~~~~L~~------aGAd~VI~p~~~a~~~LA~~vl~ 1141 (1158)
+++++.+ +|..|+..++++|+++|+++|+|+..+.++...+.. +|||.||.++...+..||+.++.
T Consensus 82 av~Il~~~~~~d~~~~D~~~il~~laik~~~p~~~iivq~~~~~n~~~~~~~~~~~~~gad~VI~~~el~~~lla~s~~~ 161 (722)
T 4hpf_A 82 ACLIIANPLCSDSHAEDISNIMRVLSIKNYDSTTRIIIQILQSHNKVYLPKIPSWNWDTGDNIICFAELKLGFIAQGCLV 161 (722)
T ss_dssp EEEECCCSSCSCHHHHHHHHHHHHHHHHHHCTTCCEEEECSSGGGGGHHHHSTTCCTTTTCEEECHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCccCCchhhHHHHHHHHHHHHHhCCCCCEEEEECChhhHHHHHhhhhhhhcCCCeEEeHHHHHHHHHHHHhcC
Confidence 9999876 478999999999999999999999999998887766 69999999999999999999999
Q ss_pred hhhhhhhhH
Q 001096 1142 QVIHDYQRE 1150 (1158)
Q Consensus 1142 ~~i~~~~~~ 1150 (1158)
|++..++.+
T Consensus 162 PG~stli~~ 170 (722)
T 4hpf_A 162 PGLCTFLTS 170 (722)
T ss_dssp TTHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999887733
No 20
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*
Probab=97.78 E-value=0.015 Score=65.92 Aligned_cols=102 Identities=17% Similarity=0.162 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHhcCChhHHHhch---hhHHHHHHHHHHHHHHHHHHHHHHHhCCChHHH---HHHhhccccCcHHH
Q 001096 655 AIAEFGVVFLLFNIGLELSVERLSSMK---KYVFGLGSAQVLVTAVVVGLVAHFVSGLPGPAS---IVIGNGLALSSTAV 728 (1158)
Q Consensus 655 ~LaeLGLi~LLF~aGLelDl~~Lrr~~---k~il~Lai~gvllt~iivglll~~llGls~~~A---lllGaiLs~TS~aV 728 (1158)
.....++.++||..|+.++++++++.. +..+...+..+++.. .+++.+..+++.+...+ ++++++ ++.+
T Consensus 43 ~~i~~~l~~~mf~~G~~l~~~~l~~~~~~~~~~~~~l~~~~vi~P-ll~~~l~~~~~l~~~~~~Glil~~~~--P~~~-- 117 (332)
T 3zux_A 43 PYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMP-ATAWCLSKLLNLPAEIAVGVILVGCC--PGGT-- 117 (332)
T ss_dssp GGHHHHHHHHHHHHHHHCCGGGGHHHHHSHHHHHHHHHHHHHHHH-HHHHHHHHHTTCCHHHHHHHHHHHHS--CCCT--
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHhCcHHHHHHHHHHHHHHH-HHHHHHHHHhCCChHHHHHHHHHhcC--Cchh--
Confidence 345578889999999999999998543 333333333443322 24554555667764322 222221 1111
Q ss_pred HHHHHHhcCCCCchhhHHHHHHHhhhhhHHHHHHHH
Q 001096 729 VLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLIL 764 (1158)
Q Consensus 729 Vv~iL~el~ll~s~~GrlaLs~sllnDi~aIvll~l 764 (1158)
...++..+-..+. ........++.++++++.-+
T Consensus 118 ~s~v~t~~a~Gd~---~la~~~~~~stll~~~~~Pl 150 (332)
T 3zux_A 118 ASNVMTYLARGNV---ALSVAVTSVSTLTSPLLTPA 150 (332)
T ss_dssp HHHHHHHHTTCCH---HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCH---HHHHHHHHHHHHHHHHHHHH
Confidence 1222333322122 45555667777777766633
No 21
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.66 E-value=0.00022 Score=66.85 Aligned_cols=103 Identities=18% Similarity=0.074 Sum_probs=80.6
Q ss_pred ccccccCCcccHHHHHHHHhhCC-CCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERL-IPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g-~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
.+++|+|.|.+|+.+++.|.+.| ++|+++|+++++.+.+...+...+.+|..+++.+.++ ++++|.||.+++.. .+.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~~~~~-~~~ 83 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKA-LGGFDAVISAAPFF-LTP 83 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHH-TTTCSEEEECSCGG-GHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHH-HcCCCEEEECCCch-hhH
Confidence 46889999999999999999999 8999999999999888888999999999999998877 56899999888644 344
Q ss_pred HHHHHHHhhCCCceEEEEecChhhHHHH
Q 001096 1089 RTVWALSKYFPNVKTFVRAHDIDHGLNL 1116 (1158)
Q Consensus 1089 ~i~l~ar~l~p~~~IIara~d~e~~~~L 1116 (1158)
.+...+++.+ .+.+.-..+.+..+.+
T Consensus 84 ~~~~~~~~~g--~~~~~~~~~~~~~~~~ 109 (118)
T 3ic5_A 84 IIAKAAKAAG--AHYFDLTEDVAATNAV 109 (118)
T ss_dssp HHHHHHHHTT--CEEECCCSCHHHHHHH
T ss_pred HHHHHHHHhC--CCEEEecCcHHHHHHH
Confidence 5555555443 3445445555544444
No 22
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.51 E-value=0.0021 Score=71.28 Aligned_cols=103 Identities=14% Similarity=0.022 Sum_probs=74.3
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCch-----HHHHhh----------------------h-CCC-CEEEcc
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSD-----RVAIGR----------------------A-LDL-PVYFGD 1059 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~-----~v~~l~----------------------~-~g~-~vi~GD 1059 (1158)
..+++|+|.|++|...++.|.+.|..|++|+.+.. ....+. . .++ .++.++
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~i~~~ 92 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYEYIRSD 92 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeEEEcCC
Confidence 35799999999999999999999999999998763 222232 2 233 566665
Q ss_pred CCCHHHHH---hcCccccCEEEEecCCchhhHHHHHHHHhhCCCceEEEEecChhhHH
Q 001096 1060 AGSREVLH---KVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDIDHGL 1114 (1158)
Q Consensus 1060 asd~e~L~---~AgI~~A~~VIi~t~dd~~Nl~i~l~ar~l~p~~~IIara~d~e~~~ 1114 (1158)
.. ++.|. + ++.++.||++++|+..|..++..+|+.+..-..+.++.+++...
T Consensus 93 ~~-~~dL~~l~~--~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvvd~pel~~ 147 (274)
T 1kyq_A 93 FK-DEYLDLENE--NDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVNVADKPDLCD 147 (274)
T ss_dssp CC-GGGGCCSST--TCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEETTCGGGBS
T ss_pred CC-HHHHhhccc--CCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEEECCCcccCe
Confidence 43 22222 2 34899999999999999999999999843224455666666544
No 23
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.36 E-value=0.0054 Score=65.95 Aligned_cols=81 Identities=9% Similarity=0.023 Sum_probs=65.6
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCch-HHHHhhhC-CCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSD-RVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~-~v~~l~~~-g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
...++|+|.|++|...++.|.+.|..|++|+++.. .++.+.+. ++.++.++.. ...+++++.||++|+|++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~------~~dL~~adLVIaAT~d~~~ 104 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVG------EEDLLNVFFIVVATNDQAV 104 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCC------GGGSSSCSEEEECCCCTHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCC------HhHhCCCCEEEECCCCHHH
Confidence 35799999999999999999999999999998764 34444443 4666666554 2357789999999999999
Q ss_pred hHHHHHHHH
Q 001096 1087 NYRTVWALS 1095 (1158)
Q Consensus 1087 Nl~i~l~ar 1095 (1158)
|..++..++
T Consensus 105 N~~I~~~ak 113 (223)
T 3dfz_A 105 NKFVKQHIK 113 (223)
T ss_dssp HHHHHHHSC
T ss_pred HHHHHHHHh
Confidence 999988876
No 24
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.95 E-value=0.015 Score=59.29 Aligned_cols=73 Identities=19% Similarity=0.140 Sum_probs=60.9
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
..++|.|. |.+|+.+++.|.+.|++|++++++++........++.++.+|.+|++.+.++ ++++|.||.+...
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKT-VAGQDAVIVLLGT 77 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHH-HTTCSEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHH-HcCCCEEEECccC
Confidence 35888887 9999999999999999999999998765444355788999999999998876 4578998887754
No 25
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.64 E-value=0.028 Score=60.75 Aligned_cols=72 Identities=18% Similarity=0.237 Sum_probs=61.8
Q ss_pred cccccCC-cccHHHHHHHHhhC--CCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1011 HIILCGF-GRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~--g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
+++|.|. |.+|..+++.|.+. |++|++++++++....+...++.++.||.+|++.+.++ ++++|+||-+...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~-~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKA-FAGVSKLLFISGP 76 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHH-TTTCSEEEECCCC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHH-HhcCCEEEEcCCC
Confidence 4778886 99999999999998 99999999998877766667899999999999999887 4578998877653
No 26
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.39 E-value=0.025 Score=61.27 Aligned_cols=69 Identities=10% Similarity=0.128 Sum_probs=61.4
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
..+++|.|.|.+|..+++.|.++|++|++++++++....+...++.++.||.+|.+ +.++|+||-+...
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~------~~~~d~vi~~a~~ 73 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS------LDGVTHLLISTAP 73 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC------CTTCCEEEECCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc------cCCCCEEEECCCc
Confidence 35799999999999999999999999999999999988888889999999999943 6789999887754
No 27
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.28 E-value=0.048 Score=58.79 Aligned_cols=86 Identities=15% Similarity=0.136 Sum_probs=65.6
Q ss_pred ccccCC-cccHHHHHHHHhhC--CCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc----
Q 001096 1012 IILCGF-GRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP---- 1084 (1158)
Q Consensus 1012 vVIiG~-G~vG~~Ia~~L~e~--g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd---- 1084 (1158)
++|.|. |.+|..+++.|.+. |++|++++++++....+...++.++.||.+|++.+.++ ++++|+||-+....
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~a~~~~~~~ 80 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSA-LQGVEKLLLISSSEVGQR 80 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHH-TTTCSEEEECC-------
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHH-HhCCCEEEEeCCCCchHH
Confidence 677886 99999999999998 99999999998877666667899999999999999877 45789988766532
Q ss_pred -hhhHHHHHHHHhhC
Q 001096 1085 -GANYRTVWALSKYF 1098 (1158)
Q Consensus 1085 -~~Nl~i~l~ar~l~ 1098 (1158)
.....+...+++.+
T Consensus 81 ~~~~~~l~~a~~~~~ 95 (286)
T 2zcu_A 81 APQHRNVINAAKAAG 95 (286)
T ss_dssp -CHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcC
Confidence 12233444555554
No 28
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.28 E-value=0.081 Score=58.72 Aligned_cols=131 Identities=19% Similarity=0.147 Sum_probs=87.2
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
...+.|+|.|.+|+.+++.|...|.+|++.|+++++.+.+.+.|..++. . +.+.++ +.++|.|+.+++....|-
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~--~---~~l~~~-l~~aDvVi~~~p~~~i~~ 230 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFH--T---DELKEH-VKDIDICINTIPSMILNQ 230 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEE--G---GGHHHH-STTCSEEEECCSSCCBCH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEc--h---hhHHHH-hhCCCEEEECCChhhhCH
Confidence 3568999999999999999999999999999999887766666765432 1 223332 468999999998764443
Q ss_pred HHHHHHHhhCCCceEEEEecChh--hHHHHHHCCCCeeecCCcHHH--HHHHHHHHHhhhhhhh
Q 001096 1089 RTVWALSKYFPNVKTFVRAHDID--HGLNLEKAGATAVVPETLEPS--LQLAAAVLAQVIHDYQ 1148 (1158)
Q Consensus 1089 ~i~l~ar~l~p~~~IIara~d~e--~~~~L~~aGAd~VI~p~~~a~--~~LA~~vl~~~i~~~~ 1148 (1158)
. .++...|...+|-.+..+. ..+..++.|+..+..|..-.. ...+..++...+..++
T Consensus 231 ~---~~~~mk~g~~lin~a~g~~~~~~~~a~~~G~~~i~~pg~~g~v~~a~a~~l~~~~~~~~l 291 (300)
T 2rir_A 231 T---VLSSMTPKTLILDLASRPGGTDFKYAEKQGIKALLAPGLPGIVAPKTAGQILANVLSKLL 291 (300)
T ss_dssp H---HHTTSCTTCEEEECSSTTCSBCHHHHHHHTCEEEECCCHHHHHCHHHHHHHHHHHHHHHH
T ss_pred H---HHHhCCCCCEEEEEeCCCCCcCHHHHHHCCCEEEECCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 2 3445556655555554321 125667789887766743332 3445555555555555
No 29
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.27 E-value=0.066 Score=58.57 Aligned_cols=88 Identities=15% Similarity=0.092 Sum_probs=67.6
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCc-----hHHHH---hhhCCCCEEEccCCCHHHHHhcCccccCEEEEe
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRS-----DRVAI---GRALDLPVYFGDAGSREVLHKVGAERACAAAIT 1080 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~-----~~v~~---l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~ 1080 (1158)
..++|.|. |.+|..+++.|.+.|++|+++++++ ++.+. +...++.++.||.+|++.|.++ ++++|+||.+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~-~~~~d~vi~~ 83 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDA-LKQVDVVISA 83 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHH-HTTCSEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHH-HhCCCEEEEC
Confidence 45888885 9999999999999999999999983 44432 3456899999999999999876 4579999887
Q ss_pred cCCc------hhhHHHHHHHHhhC
Q 001096 1081 LDTP------GANYRTVWALSKYF 1098 (1158)
Q Consensus 1081 t~dd------~~Nl~i~l~ar~l~ 1098 (1158)
.... .....++..+++.+
T Consensus 84 a~~~~~~~~~~~~~~l~~aa~~~g 107 (313)
T 1qyd_A 84 LAGGVLSHHILEQLKLVEAIKEAG 107 (313)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSC
T ss_pred CccccchhhHHHHHHHHHHHHhcC
Confidence 7543 23345556666655
No 30
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.25 E-value=0.073 Score=58.65 Aligned_cols=89 Identities=13% Similarity=0.136 Sum_probs=68.6
Q ss_pred cccccccCC-cccHHHHHHHHhhCCCCEEEEeCCch-HHH---HhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1009 QDHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSD-RVA---IGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1009 ~~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~-~v~---~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
...++|.|. |.+|..+++.|.+.|++|+++++++. +.. .+...|+.++.||.+|++.|.++ ++++|+||.+...
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a-~~~~d~vi~~a~~ 89 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVEL-MKKVDVVISALAF 89 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHH-HTTCSEEEECCCG
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHH-HcCCCEEEECCch
Confidence 346899985 99999999999999999999999874 332 33567899999999999999876 4568999887764
Q ss_pred c--hhhHHHHHHHHhhC
Q 001096 1084 P--GANYRTVWALSKYF 1098 (1158)
Q Consensus 1084 d--~~Nl~i~l~ar~l~ 1098 (1158)
. .....++..+++.+
T Consensus 90 ~~~~~~~~l~~aa~~~g 106 (318)
T 2r6j_A 90 PQILDQFKILEAIKVAG 106 (318)
T ss_dssp GGSTTHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHhcC
Confidence 3 23344555666665
No 31
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.20 E-value=0.06 Score=58.37 Aligned_cols=88 Identities=15% Similarity=0.029 Sum_probs=69.4
Q ss_pred cccccCC-cccHHHHHHHHhhC-CCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc---h
Q 001096 1011 HIILCGF-GRVGQIIAQLLSER-LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP---G 1085 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~-g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd---~ 1085 (1158)
.++|.|. |.+|+.+++.|.+. |++|+++++++++...+...++.++.||.+|++.+.++ ++++|.||.+.... .
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~-~~~~d~vi~~a~~~~~~~ 80 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEA-FKGMDTVVFIPSIIHPSF 80 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHH-TTTCSEEEECCCCCCSHH
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHH-HhCCCEEEEeCCCCccch
Confidence 3678885 89999999999998 99999999999987777778999999999999999876 45789988876542 2
Q ss_pred hhH----HHHHHHHhhCC
Q 001096 1086 ANY----RTVWALSKYFP 1099 (1158)
Q Consensus 1086 ~Nl----~i~l~ar~l~p 1099 (1158)
.|+ .++..+++.+.
T Consensus 81 ~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 81 KRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHcCC
Confidence 232 34445565553
No 32
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.12 E-value=0.067 Score=59.82 Aligned_cols=88 Identities=15% Similarity=0.140 Sum_probs=70.3
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCc----hHHH---HhhhCCCCEEEccCCCHHHHHhcCcc--ccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRS----DRVA---IGRALDLPVYFGDAGSREVLHKVGAE--RACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~----~~v~---~l~~~g~~vi~GDasd~e~L~~AgI~--~A~~VIi 1079 (1158)
..++|.|. |.+|+.+++.|.+.|++|+++++++ ++.. .+...++.++.||.+|++.|.++ ++ ++|+||.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~~~~~~d~Vi~ 89 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKI-LKEHEIDIVVS 89 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHH-HHHTTCCEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHH-HhhCCCCEEEE
Confidence 47899998 9999999999999999999999977 4433 44567999999999999998876 34 7899888
Q ss_pred ecCC--chhhHHHHHHHHhhC
Q 001096 1080 TLDT--PGANYRTVWALSKYF 1098 (1158)
Q Consensus 1080 ~t~d--d~~Nl~i~l~ar~l~ 1098 (1158)
+... ......++..+++.+
T Consensus 90 ~a~~~n~~~~~~l~~aa~~~g 110 (346)
T 3i6i_A 90 TVGGESILDQIALVKAMKAVG 110 (346)
T ss_dssp CCCGGGGGGHHHHHHHHHHHC
T ss_pred CCchhhHHHHHHHHHHHHHcC
Confidence 8764 334456666777766
No 33
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.08 E-value=0.052 Score=60.24 Aligned_cols=70 Identities=17% Similarity=-0.011 Sum_probs=58.0
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
..+.|+|.|.+|..++..|.+.|++|+++|+++++.+.+.+.|......|..+ -++++|.||++++++..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e-------~~~~aDvvi~~vp~~~~ 77 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASARE-------FAGVVDALVILVVNAAQ 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTT-------TTTTCSEEEECCSSHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHH-------HHhcCCEEEEECCCHHH
Confidence 46889999999999999999999999999999999999988887654444332 14679999999998743
No 34
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.04 E-value=0.074 Score=58.04 Aligned_cols=88 Identities=16% Similarity=0.155 Sum_probs=68.0
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCc------hHHH---HhhhCCCCEEEccCCCHHHHHhcCccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRS------DRVA---IGRALDLPVYFGDAGSREVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~------~~v~---~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi 1079 (1158)
..++|.|. |.+|..+++.|.+.|++|+++++++ ++.+ .+...|+.++.||.+|++.|.++ ++++|+||.
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~ 83 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEA-VKNVDVVIS 83 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHH-HHTCSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHH-HcCCCEEEE
Confidence 35888986 9999999999999999999999974 3332 23457899999999999999876 456899988
Q ss_pred ecCCc--hhhHHHHHHHHhhC
Q 001096 1080 TLDTP--GANYRTVWALSKYF 1098 (1158)
Q Consensus 1080 ~t~dd--~~Nl~i~l~ar~l~ 1098 (1158)
+.+.. .....++..+++.+
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g 104 (308)
T 1qyc_A 84 TVGSLQIESQVNIIKAIKEVG 104 (308)
T ss_dssp CCCGGGSGGGHHHHHHHHHHC
T ss_pred CCcchhhhhHHHHHHHHHhcC
Confidence 87643 23345566677665
No 35
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.00 E-value=0.024 Score=59.00 Aligned_cols=82 Identities=15% Similarity=0.042 Sum_probs=66.2
Q ss_pred ccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC------c
Q 001096 1012 IILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT------P 1084 (1158)
Q Consensus 1012 vVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d------d 1084 (1158)
++|.|. |.+|+.+++.|.++|++|++++++++....+...++.++.||.+|++. +. +.++|+||-+... .
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-~~--~~~~d~vi~~ag~~~~~~~~ 79 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-AD--LDSVDAVVDALSVPWGSGRG 79 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-HH--HTTCSEEEECCCCCTTSSCT
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH-hh--cccCCEEEECCccCCCcchh
Confidence 788887 999999999999999999999999998887777899999999999887 33 3578998887754 2
Q ss_pred hhhHHHHHHHHh
Q 001096 1085 GANYRTVWALSK 1096 (1158)
Q Consensus 1085 ~~Nl~i~l~ar~ 1096 (1158)
..|+..+..+-+
T Consensus 80 ~~n~~~~~~l~~ 91 (224)
T 3h2s_A 80 YLHLDFATHLVS 91 (224)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 446655554433
No 36
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.98 E-value=0.018 Score=63.38 Aligned_cols=105 Identities=15% Similarity=0.098 Sum_probs=67.6
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEcc--------CCCHHHHHhcCccccCEEEEecC
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGD--------AGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GD--------asd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
++.|+|.|.+|..++..|.+.|++|+++|+++++.+.+.+.|..+...+ .++.+.+.+ .++++|.||+++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDH-QNEQVDLIIALTK 83 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCT-TSCCCSEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcc-cCCCCCEEEEEec
Confidence 5889999999999999999999999999999999988877775544311 112211111 2348999999998
Q ss_pred CchhhHHHHHHHHhh-CCCceEEEEecChhhHHHHH
Q 001096 1083 TPGANYRTVWALSKY-FPNVKTFVRAHDIDHGLNLE 1117 (1158)
Q Consensus 1083 dd~~Nl~i~l~ar~l-~p~~~IIara~d~e~~~~L~ 1117 (1158)
.+.. ..+...++.. .|+..|+...+.....+.+.
T Consensus 84 ~~~~-~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~ 118 (316)
T 2ew2_A 84 AQQL-DAMFKAIQPMITEKTYVLCLLNGLGHEDVLE 118 (316)
T ss_dssp HHHH-HHHHHHHGGGCCTTCEEEECCSSSCTHHHHT
T ss_pred cccH-HHHHHHHHHhcCCCCEEEEecCCCCcHHHHH
Confidence 7632 3333334433 34544444434344434443
No 37
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.95 E-value=0.1 Score=56.82 Aligned_cols=87 Identities=17% Similarity=0.145 Sum_probs=67.6
Q ss_pred cccccCC-cccHHHHHHHHhhCCCCEEEEeCCc-------hHHH---HhhhCCCCEEEccCCCHHHHHhcCccccCEEEE
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRS-------DRVA---IGRALDLPVYFGDAGSREVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~-------~~v~---~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi 1079 (1158)
.++|.|. |.+|..+++.|.+.|++|+++++++ ++.+ .+...|+.++.||.+|++.|.++ ++++|+||.
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~-~~~~d~vi~ 82 (307)
T 2gas_A 4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKA-IKQVDIVIC 82 (307)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHH-HTTCSEEEE
T ss_pred EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHH-HhCCCEEEE
Confidence 5788886 9999999999999999999999987 5443 23457899999999999999876 456899988
Q ss_pred ecCCc--hhhHHHHHHHHhhC
Q 001096 1080 TLDTP--GANYRTVWALSKYF 1098 (1158)
Q Consensus 1080 ~t~dd--~~Nl~i~l~ar~l~ 1098 (1158)
+.... .....++..+++.+
T Consensus 83 ~a~~~~~~~~~~l~~aa~~~g 103 (307)
T 2gas_A 83 AAGRLLIEDQVKIIKAIKEAG 103 (307)
T ss_dssp CSSSSCGGGHHHHHHHHHHHC
T ss_pred CCcccccccHHHHHHHHHhcC
Confidence 87643 23344555666665
No 38
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=94.88 E-value=0.048 Score=59.54 Aligned_cols=72 Identities=18% Similarity=0.169 Sum_probs=60.7
Q ss_pred ccccccCC-cccHHHHHHHHhhCC-CCEEEEeCCchHH--HHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERL-IPFVALDVRSDRV--AIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g-~~VvVID~d~~~v--~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
+.++|.|. |.+|+.+++.|.+.| ++|++++++++.. ..+...++.++.||.+|++.+.++ ++.+|.||.+.+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~-~~~~d~vi~~a~ 81 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELA-LNGAYATFIVTN 81 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHH-HTTCSEEEECCC
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHH-HhcCCEEEEeCC
Confidence 56888887 999999999999988 9999999987754 345567899999999999999876 456899888765
No 39
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.85 E-value=0.095 Score=58.01 Aligned_cols=108 Identities=18% Similarity=0.092 Sum_probs=71.8
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
+.++.|+|.|.+|..++..|.+.|++|+++|.++++.+.+.+.|..+ ..+.+.+ ++ +|.|+++++++..--
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~~~~~----~~-aDvvi~~vp~~~~~~ 85 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATL----ADSVADV----AA-ADLIHITVLDDAQVR 85 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEE----CSSHHHH----TT-SSEEEECCSSHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEE----cCCHHHH----Hh-CCEEEEECCChHHHH
Confidence 35689999999999999999999999999999999999888877643 2333332 23 899999999874433
Q ss_pred HHHHHHHh-hCCCceEEEEecC--hhhH----HHHHHCCCCeeec
Q 001096 1089 RTVWALSK-YFPNVKTFVRAHD--IDHG----LNLEKAGATAVVP 1126 (1158)
Q Consensus 1089 ~i~l~ar~-l~p~~~IIara~d--~e~~----~~L~~aGAd~VI~ 1126 (1158)
.+...+.. +.|+ .+++-... +... +.+.+.|+..+-.
T Consensus 86 ~v~~~l~~~l~~g-~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~ 129 (296)
T 3qha_A 86 EVVGELAGHAKPG-TVIAIHSTISDTTAVELARDLKARDIHIVDA 129 (296)
T ss_dssp HHHHHHHTTCCTT-CEEEECSCCCHHHHHHHHHHHGGGTCEEEEC
T ss_pred HHHHHHHHhcCCC-CEEEEeCCCCHHHHHHHHHHHHHcCCEEEeC
Confidence 33333333 3344 44444443 2222 2334457655433
No 40
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=94.76 E-value=0.076 Score=60.96 Aligned_cols=112 Identities=19% Similarity=0.139 Sum_probs=82.0
Q ss_pred ccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh
Q 001096 1008 LQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1158)
Q Consensus 1008 l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N 1087 (1158)
....++|+|.|.+|+.+++.|.+. .+|++.|+++++.+.+.+.. ..+..|..+.+.+.++ ++++|+||.+++.. .+
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~-~~~~~d~~~~~~l~~l-l~~~DvVIn~~P~~-~~ 90 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFA-TPLKVDASNFDKLVEV-MKEFELVIGALPGF-LG 90 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTS-EEEECCTTCHHHHHHH-HTTCSCEEECCCHH-HH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhC-CeEEEecCCHHHHHHH-HhCCCEEEECCChh-hh
Confidence 356799999999999999999988 89999999999998876543 4567899998888876 56899999998765 33
Q ss_pred HHHHHHHHhhCCCceEEEEecC----hhhHHHHHHCCCCeee
Q 001096 1088 YRTVWALSKYFPNVKTFVRAHD----IDHGLNLEKAGATAVV 1125 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~IIara~d----~e~~~~L~~aGAd~VI 1125 (1158)
..++..+.+.+ ..++-.+.+ .+..+..+++|+..+.
T Consensus 91 ~~v~~a~l~~G--~~~vD~s~~~~~~~~l~~~Ak~aG~~~l~ 130 (365)
T 2z2v_A 91 FKSIKAAIKSK--VDMVDVSFMPENPLELRDEAEKAQVTIVF 130 (365)
T ss_dssp HHHHHHHHHTT--CCEEECCCCSSCGGGGHHHHHHTTCEEEC
T ss_pred HHHHHHHHHhC--CeEEEccCCcHHHHHHHHHHHHcCCEEEE
Confidence 34444444433 333333332 2346777888987763
No 41
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.75 E-value=0.031 Score=59.19 Aligned_cols=74 Identities=11% Similarity=0.207 Sum_probs=62.7
Q ss_pred ccccccC-CcccHHHHHHHHhhCC-CCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERL-IPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g-~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
..++|.| .|.+|+.+++.|.+.| ++|++++++++....+...+..++.+|.+|++.++++ ++.+|+||......
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~vv~~a~~~ 99 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQA-MQGQDIVYANLTGE 99 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHH-HTTCSEEEEECCST
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHH-hcCCCEEEEcCCCC
Confidence 4688888 6899999999999999 8999999999887666666889999999999998876 45789988776654
No 42
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=94.75 E-value=0.088 Score=54.88 Aligned_cols=73 Identities=14% Similarity=0.104 Sum_probs=61.6
Q ss_pred ccccccC-CcccHHHHHHHHh-hCCCCEEEEeCCch-HHHHh--hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLS-ERLIPFVALDVRSD-RVAIG--RALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~-e~g~~VvVID~d~~-~v~~l--~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
+.++|.| .|.+|+.+++.|. +.|++|++++++++ +.+.+ ...+..++.+|.+|++.++++ ++++|+||...+.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQA-VTNAEVVFVGAME 83 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHH-HTTCSEEEESCCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHH-HcCCCEEEEcCCC
Confidence 4588888 5899999999999 89999999999988 76655 456788999999999998876 3578999888765
No 43
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.69 E-value=0.12 Score=56.91 Aligned_cols=108 Identities=15% Similarity=0.064 Sum_probs=71.8
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHHH
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~i 1090 (1158)
++.|+|.|.+|..++..|.+.|++|+++|.++++.+.+.+.|... ..+.+.+ ++++|.||++++++..--.+
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~----~~~~~~~----~~~aDvvi~~vp~~~~~~~v 76 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASA----ARSARDA----VQGADVVISMLPASQHVEGL 76 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE----CSSHHHH----HTTCSEEEECCSCHHHHHHH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeE----cCCHHHH----HhCCCeEEEECCCHHHHHHH
Confidence 578999999999999999999999999999999999888877543 2333322 24689999999877432233
Q ss_pred HH---HHH-hhCCCceEEEEecC--hhh----HHHHHHCCCCeeecC
Q 001096 1091 VW---ALS-KYFPNVKTFVRAHD--IDH----GLNLEKAGATAVVPE 1127 (1158)
Q Consensus 1091 ~l---~ar-~l~p~~~IIara~d--~e~----~~~L~~aGAd~VI~p 1127 (1158)
.. .+. .+.|+ .+++-..+ +.. .+.+.+.|+..+-.|
T Consensus 77 ~~~~~~~~~~l~~~-~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~p 122 (302)
T 2h78_A 77 YLDDDGLLAHIAPG-TLVLECSTIAPTSARKIHAAARERGLAMLDAP 122 (302)
T ss_dssp HHSSSCGGGSSCSS-CEEEECSCCCHHHHHHHHHHHHHTTCCEEECC
T ss_pred HcCchhHHhcCCCC-cEEEECCCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 32 222 23344 45544322 222 334455677665443
No 44
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.69 E-value=0.064 Score=55.84 Aligned_cols=85 Identities=20% Similarity=0.118 Sum_probs=66.4
Q ss_pred cccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCC-HHHHHhcCccccCEEEEecCCch---
Q 001096 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGS-REVLHKVGAERACAAAITLDTPG--- 1085 (1158)
Q Consensus 1011 hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd-~e~L~~AgI~~A~~VIi~t~dd~--- 1085 (1158)
+++|.| .|.+|+.+++.|.+.|++|++++++++..... .++.++.||.+| ++.+.++ +++.|+||-+.....
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~-~~~~d~vi~~ag~~~~~~ 78 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQ-LHGMDAIINVSGSGGKSL 78 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTT-TTTCSEEEECCCCTTSSC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHH-HcCCCEEEECCcCCCCCc
Confidence 367888 78999999999999999999999998765443 578999999999 9998876 457999988876431
Q ss_pred --h----hHHHHHHHHhhC
Q 001096 1086 --A----NYRTVWALSKYF 1098 (1158)
Q Consensus 1086 --~----Nl~i~l~ar~l~ 1098 (1158)
. ...++..+++..
T Consensus 79 ~~~n~~~~~~l~~a~~~~~ 97 (219)
T 3dqp_A 79 LKVDLYGAVKLMQAAEKAE 97 (219)
T ss_dssp CCCCCHHHHHHHHHHHHTT
T ss_pred EeEeHHHHHHHHHHHHHhC
Confidence 2 234555566654
No 45
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.68 E-value=0.071 Score=60.72 Aligned_cols=94 Identities=13% Similarity=0.145 Sum_probs=68.7
Q ss_pred ccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCC-HHHHHhcCccccCEEEEecCCchh
Q 001096 1008 LQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGS-REVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1008 l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd-~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
....+.|+|.|.+|..++..|.+.|++|++.|.+++..+.+.+.|.... .+ .+.+..+ .+++|.||++++.+ .
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~----~~~~e~~~~a-~~~aDlVilavP~~-~ 80 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVS----ADLEATLQRA-AAEDALIVLAVPMT-A 80 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEE----SCHHHHHHHH-HHTTCEEEECSCHH-H
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeee----CCHHHHHHhc-ccCCCEEEEeCCHH-H
Confidence 3456889999999999999999999999999999999998888887432 33 3455554 45689999999965 3
Q ss_pred hHHHHHHHHhhCCCceEEEEec
Q 001096 1087 NYRTVWALSKYFPNVKTFVRAH 1108 (1158)
Q Consensus 1087 Nl~i~l~ar~l~p~~~IIara~ 1108 (1158)
...+...++...|+ .+++-+-
T Consensus 81 ~~~vl~~l~~~~~~-~iv~Dv~ 101 (341)
T 3ktd_A 81 IDSLLDAVHTHAPN-NGFTDVV 101 (341)
T ss_dssp HHHHHHHHHHHCTT-CCEEECC
T ss_pred HHHHHHHHHccCCC-CEEEEcC
Confidence 33444445555555 3444343
No 46
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.68 E-value=0.1 Score=57.22 Aligned_cols=108 Identities=14% Similarity=0.123 Sum_probs=71.9
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHHH
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~i 1090 (1158)
++.|+|.|.+|..++..|.+.|++|+++|+++++.+.+.+.|.... .+.+.+ ++++|.|+++++++.....+
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~~~~~----~~~aDvvi~~vp~~~~~~~v 74 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERA----ATPCEV----VESCPVTFAMLADPAAAEEV 74 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC----SSHHHH----HHHCSEEEECCSSHHHHHHH
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec----CCHHHH----HhcCCEEEEEcCCHHHHHHH
Confidence 5789999999999999999999999999999999998888776431 233322 23589999999976443333
Q ss_pred H---HH-HHhhCCCceEEEEecC--hhh----HHHHHHCCCCeeecC
Q 001096 1091 V---WA-LSKYFPNVKTFVRAHD--IDH----GLNLEKAGATAVVPE 1127 (1158)
Q Consensus 1091 ~---l~-ar~l~p~~~IIara~d--~e~----~~~L~~aGAd~VI~p 1127 (1158)
. .. ...+.|+ .+++-..+ +.. .+.+.+.|+..+-.|
T Consensus 75 ~~~~~~l~~~l~~~-~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~p 120 (287)
T 3pef_A 75 CFGKHGVLEGIGEG-RGYVDMSTVDPATSQRIGVAVVAKGGRFLEAP 120 (287)
T ss_dssp HHSTTCHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred HcCcchHhhcCCCC-CEEEeCCCCCHHHHHHHHHHHHHhCCEEEECC
Confidence 3 22 2334454 44444443 222 234456677655444
No 47
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=94.66 E-value=0.13 Score=56.93 Aligned_cols=130 Identities=16% Similarity=0.091 Sum_probs=83.0
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~ 1089 (1158)
..+.|+|+|.+|+.+++.|...|.+|++.|+++++.+.+.+.|..++. . +.+.++ +.++|.|+.+++....|-.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~--~---~~l~~~-l~~aDvVi~~~p~~~i~~~ 229 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFH--I---SKAAQE-LRDVDVCINTIPALVVTAN 229 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEE--G---GGHHHH-TTTCSEEEECCSSCCBCHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecC--h---hhHHHH-hcCCCEEEECCChHHhCHH
Confidence 468999999999999999999999999999998887666666765432 1 123222 4589999999987544432
Q ss_pred HHHHHHhhCCCceEEEEecChh--hHHHHHHCCCCeeecCCcHHH--HHHHHHHHHhhhhhhh
Q 001096 1090 TVWALSKYFPNVKTFVRAHDID--HGLNLEKAGATAVVPETLEPS--LQLAAAVLAQVIHDYQ 1148 (1158)
Q Consensus 1090 i~l~ar~l~p~~~IIara~d~e--~~~~L~~aGAd~VI~p~~~a~--~~LA~~vl~~~i~~~~ 1148 (1158)
.++...|...+|-.+..+. ..+..++.|+..+..|..-.. ...+..++...+..++
T Consensus 230 ---~l~~mk~~~~lin~ar~~~~~~~~~a~~~Gv~~~~~~~l~~~v~p~~a~~~~~~~~~~~l 289 (293)
T 3d4o_A 230 ---VLAEMPSHTFVIDLASKPGGTDFRYAEKRGIKALLVPGLPGIVAPKTAGRILADVLVKLL 289 (293)
T ss_dssp ---HHHHSCTTCEEEECSSTTCSBCHHHHHHHTCEEEECCCHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ---HHHhcCCCCEEEEecCCCCCCCHHHHHHCCCEEEECCCCCcccCHHHHHHHHHHHHHHHh
Confidence 3444556655554443221 226667789876544433211 2244445555444443
No 48
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.65 E-value=0.14 Score=56.33 Aligned_cols=88 Identities=16% Similarity=0.194 Sum_probs=67.4
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCc------hHHHH---hhhCCCCEEEccCCCHHHHHhcCccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRS------DRVAI---GRALDLPVYFGDAGSREVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~------~~v~~---l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi 1079 (1158)
..++|.|. |.+|..+++.|.+.|++|+++++++ ++.+. +...++.++.||.+|++.|.++ ++.+|+||.
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a-~~~~d~vi~ 83 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSV-LKQVDIVIS 83 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHH-HTTCSEEEE
T ss_pred cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHH-HcCCCEEEE
Confidence 35788885 9999999999999999999999986 33332 3457899999999999999876 456899888
Q ss_pred ecCCc--hhhHHHHHHHHhhC
Q 001096 1080 TLDTP--GANYRTVWALSKYF 1098 (1158)
Q Consensus 1080 ~t~dd--~~Nl~i~l~ar~l~ 1098 (1158)
+.... .....++..+++.+
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g 104 (321)
T 3c1o_A 84 ALPFPMISSQIHIINAIKAAG 104 (321)
T ss_dssp CCCGGGSGGGHHHHHHHHHHC
T ss_pred CCCccchhhHHHHHHHHHHhC
Confidence 77643 23345555666655
No 49
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.60 E-value=0.13 Score=57.61 Aligned_cols=109 Identities=17% Similarity=0.131 Sum_probs=73.9
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~ 1089 (1158)
.++.|+|.|.+|..++..|.+.|++|+++|+++++.+.+.+.|..+. .+.+.+ ++++|.|+++++++..--.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~----~~~~e~----~~~aDvVi~~vp~~~~~~~ 103 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIH----EQARAA----ARDADIVVSMLENGAVVQD 103 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEE----SSHHHH----HTTCSEEEECCSSHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEee----CCHHHH----HhcCCEEEEECCCHHHHHH
Confidence 46899999999999999999999999999999999999888775432 233222 3478999999998644333
Q ss_pred HH---HHHHhhCCCceEEEEecC--hhh----HHHHHHCCCCeeecC
Q 001096 1090 TV---WALSKYFPNVKTFVRAHD--IDH----GLNLEKAGATAVVPE 1127 (1158)
Q Consensus 1090 i~---l~ar~l~p~~~IIara~d--~e~----~~~L~~aGAd~VI~p 1127 (1158)
+. ..+..+.|. .+++-... +.. .+.+.+.|+..+-.|
T Consensus 104 v~~~~~~~~~l~~~-~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~p 149 (320)
T 4dll_A 104 VLFAQGVAAAMKPG-SLFLDMASITPREARDHAARLGALGIAHLDTP 149 (320)
T ss_dssp HHTTTCHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHcchhHHhhCCCC-CEEEecCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 33 223344555 44444333 222 234556677665444
No 50
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.55 E-value=0.082 Score=58.93 Aligned_cols=109 Identities=12% Similarity=0.106 Sum_probs=72.2
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~ 1089 (1158)
.++.|+|.|.+|..++..|.+.|++|+++|+++++.+.+.+.|..+ ..+++.+ ++++|.||++++++..--.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~----~~~~~~~----~~~aDvvi~~vp~~~~~~~ 93 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASV----CESPAEV----IKKCKYTIAMLSDPCAALS 93 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE----CSSHHHH----HHHCSEEEECCSSHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeE----cCCHHHH----HHhCCEEEEEcCCHHHHHH
Confidence 4688999999999999999999999999999999999888877643 2333322 2468999999988743222
Q ss_pred HH---HHH-HhhCCCceEEEEecC--hhh----HHHHHHCCCCeeecC
Q 001096 1090 TV---WAL-SKYFPNVKTFVRAHD--IDH----GLNLEKAGATAVVPE 1127 (1158)
Q Consensus 1090 i~---l~a-r~l~p~~~IIara~d--~e~----~~~L~~aGAd~VI~p 1127 (1158)
+. ..+ ..+.++ .+++-..+ +.. ...+.+.|+..+-.|
T Consensus 94 v~~~~~~l~~~l~~g-~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~p 140 (310)
T 3doj_A 94 VVFDKGGVLEQICEG-KGYIDMSTVDAETSLKINEAITGKGGRFVEGP 140 (310)
T ss_dssp HHHSTTCGGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHhCchhhhhccCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 22 111 223344 44544443 222 234556677655444
No 51
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.51 E-value=0.15 Score=58.04 Aligned_cols=125 Identities=18% Similarity=0.124 Sum_probs=90.1
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHHH
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~i 1090 (1158)
.++|+|.|.+|+.+++.|.+ +++|.+.|.+.++.+.+++ ....+..|..|.+.|.++ ++++|+||.+++.. .+..+
T Consensus 18 kilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-~~~~~~~d~~d~~~l~~~-~~~~DvVi~~~p~~-~~~~v 93 (365)
T 3abi_A 18 KVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-FATPLKVDASNFDKLVEV-MKEFELVIGALPGF-LGFKS 93 (365)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-TSEEEECCTTCHHHHHHH-HTTCSEEEECCCGG-GHHHH
T ss_pred EEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-cCCcEEEecCCHHHHHHH-HhCCCEEEEecCCc-ccchH
Confidence 49999999999999999975 5799999999999888765 456788999999999887 67899999888765 56667
Q ss_pred HHHHHhhCCCceEEEEecC----hhhHHHHHHCCCCeeecCCcHHH--HHHHHHHHH
Q 001096 1091 VWALSKYFPNVKTFVRAHD----IDHGLNLEKAGATAVVPETLEPS--LQLAAAVLA 1141 (1158)
Q Consensus 1091 ~l~ar~l~p~~~IIara~d----~e~~~~L~~aGAd~VI~p~~~a~--~~LA~~vl~ 1141 (1158)
+..+-+.+. ..+-.+.+ .+..+..+++|+..+..--..+| ..+++++..
T Consensus 94 ~~~~~~~g~--~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G~~PG~~~~~a~~~~~ 148 (365)
T 3abi_A 94 IKAAIKSKV--DMVDVSFMPENPLELRDEAEKAQVTIVFDAGFAPGLSNILMGRIFQ 148 (365)
T ss_dssp HHHHHHHTC--EEEECCCCSSCGGGGHHHHHHTTCEEECCCBTTTBHHHHHHHHHHH
T ss_pred HHHHHhcCc--ceEeeeccchhhhhhhhhhccCCceeeecCCCCCchHHHHHHHHHH
Confidence 766666653 33333333 23456677888877654333333 334444433
No 52
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.50 E-value=0.04 Score=56.91 Aligned_cols=70 Identities=14% Similarity=0.114 Sum_probs=59.3
Q ss_pred cccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
+++|.|. |.+|+.+++.|.++|++|++++++++....+. .++.++.||.+|++. +. +.++|+||-+.+..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~-~~--~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL-SD--LSDQNVVVDAYGIS 72 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH-HH--HTTCSEEEECCCSS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh-hh--hcCCCEEEECCcCC
Confidence 3788885 89999999999999999999999999887665 789999999999877 43 35789998887553
No 53
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=94.46 E-value=0.19 Score=59.19 Aligned_cols=130 Identities=11% Similarity=0.007 Sum_probs=85.3
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC--CCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL--DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~--g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N 1087 (1158)
..++|+|.|.+|+.+++.|.+.|.+|++.|+++++.+.+.+. +...+.+|.++.+.+.++ ++++|+||.+++.....
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~-l~~~DvVIn~a~~~~~~ 82 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAE-VAKHDLVISLIPYTFHA 82 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHH-HTTSSEEEECCC--CHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHH-HcCCcEEEECCccccch
Confidence 357888999999999999999999999999999888766543 355778999998877654 35799999999764321
Q ss_pred HHHHHHHHhhCCCceEEEEecC----hhhHHHHHHCCCCeeecCCc--HHHHHHHHHHHHhh
Q 001096 1088 YRTVWALSKYFPNVKTFVRAHD----IDHGLNLEKAGATAVVPETL--EPSLQLAAAVLAQV 1143 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~IIara~d----~e~~~~L~~aGAd~VI~p~~--~a~~~LA~~vl~~~ 1143 (1158)
.+...+-+. ...++..+.+ ....+..+++|+..+.-... -....++++++.+.
T Consensus 83 -~i~~a~l~~--g~~vvd~~~~~~~~~~l~~aA~~aGv~~i~g~g~~pg~~~~~a~~li~q~ 141 (450)
T 1ff9_A 83 -TVIKSAIRQ--KKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGLDPGIDHLYAIKTIEEV 141 (450)
T ss_dssp -HHHHHHHHH--TCEEEESSCCCHHHHHTHHHHHHTTCEEECSCBBTTBHHHHHHHHHHHHH
T ss_pred -HHHHHHHhC--CCeEEEeecccHHHHHHHHHHHHCCCeEEeCCCCcCchHHHHHHHHHHHh
Confidence 122222222 2344443332 23445557789875544333 23445666666665
No 54
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel, gating ring, rossman fold, transport, ION trans; 3.10A {Homo sapiens}
Probab=94.45 E-value=0.019 Score=71.72 Aligned_cols=133 Identities=14% Similarity=0.086 Sum_probs=89.7
Q ss_pred ccccccccccCCccc------HHHHHHHHhhCCC------CEEEEeCCchHHHHhhhC----CCCEEEccCCCHHHHHhc
Q 001096 1006 DDLQDHIILCGFGRV------GQIIAQLLSERLI------PFVALDVRSDRVAIGRAL----DLPVYFGDAGSREVLHKV 1069 (1158)
Q Consensus 1006 ~~l~~hvVIiG~G~v------G~~Ia~~L~e~g~------~VvVID~d~~~v~~l~~~----g~~vi~GDasd~e~L~~A 1069 (1158)
..+++|+|||+++.. =+.+..-|+..+. ++|++....-..+.++.. .+.++.|++.+.+.|++|
T Consensus 398 ~~~~nHivvC~~~~~~~~~~gl~~fv~PLRa~~~~~~~l~~IVil~~~~~~~~~w~~i~~Fp~Vy~v~Gspl~~~dL~~a 477 (798)
T 3naf_A 398 TVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVSILPGTPLSRADLRAV 477 (798)
T ss_dssp SCCCSCEEEEEECCSSSCCCCTHHHHHHHHCSSSCSTTCCCEEEEBCHHHHHHHHTTTTTSSSEEBCBSCTTCHHHHHHT
T ss_pred hccCCCEEEEEecCCCcchhhhHHhhhhhhcccCCccccCCEEEECCCCcCHHHHHHhhCCCceEEecCCCCCHHHHHHh
Confidence 567899999998753 3567777775443 788887633322334332 466778999999999999
Q ss_pred CccccCEEEEecCC----------chhhHHHHHHHHh------------------------------------------h
Q 001096 1070 GAERACAAAITLDT----------PGANYRTVWALSK------------------------------------------Y 1097 (1158)
Q Consensus 1070 gI~~A~~VIi~t~d----------d~~Nl~i~l~ar~------------------------------------------l 1097 (1158)
||..|+.+|++.+. |..++.+++.++. .
T Consensus 478 nI~~a~~~VIls~~~~~~~~~~l~D~~~il~~lni~~m~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (798)
T 3naf_A 478 NINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITT 557 (798)
T ss_dssp TSTTCSEEEEEESSCTTCCCSSSTTHHHHHHHHHHHHCCCC--------------------------------------C
T ss_pred CHHhCCEEEEEcCCCCCCCChhhhhHHHHHhhhhhhhhccccccccccccccccccccccccccccccccchhhcccccc
Confidence 99999999998543 2244444444333 3
Q ss_pred CCCceEEEEecChhhHHHHHH-----CCCCeeecCCcHHHHHHHHH
Q 001096 1098 FPNVKTFVRAHDIDHGLNLEK-----AGATAVVPETLEPSLQLAAA 1138 (1158)
Q Consensus 1098 ~p~~~IIara~d~e~~~~L~~-----aGAd~VI~p~~~a~~~LA~~ 1138 (1158)
+++++|+....++.+...|.. .+.+..+.|.+..|...+..
T Consensus 558 ~~~ipiitEL~~~~ni~fl~~~~~~~~~~~~~~~~~fa~G~~fs~s 603 (798)
T 3naf_A 558 GVNIPIITELVNDTNVQFLDQDDDDDPDTELYLTQPFACGTAFAVS 603 (798)
T ss_dssp TTCCCEEEEESSTTGGGGGSCCTTCCTTCCGGGSHHHHHTSEEETT
T ss_pred CCCCceEEEecCCCccccccccCCCccCcceeecccccccceeHHH
Confidence 567889999998888887755 34455555555555443333
No 55
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=94.41 E-value=1.3 Score=63.10 Aligned_cols=65 Identities=14% Similarity=0.123 Sum_probs=43.2
Q ss_pred hhhHHHHHhhhHHHHHHHHHhhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 001096 266 EDGLLLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQMNALKAEEDVANIM 330 (1158)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~a~~~~~~~m 330 (1158)
+.+++..|+++..+.++.|.+++++|..++.+..+||++-+......++-|..+.+.+.-+..+.
T Consensus 2012 kr~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~ 2076 (3245)
T 3vkg_A 2012 LREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSI 2076 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667777777777777777777777777777777777776666655555555555554444433
No 56
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.39 E-value=0.05 Score=64.33 Aligned_cols=83 Identities=17% Similarity=0.031 Sum_probs=67.4
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCch-HHHHhhh-CCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSD-RVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~-~v~~l~~-~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N 1087 (1158)
.+++|+|.|++|...++.|.+.|..|+++|.+.. ....+.+ .++.++.++... ..+++++.||++++|+..|
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~------~~l~~~~lVi~at~~~~~n 86 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE------TLLDSCWLAIAATDDDTVN 86 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG------GGGTTCSEEEECCSCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCc------cccCCccEEEEcCCCHHHH
Confidence 5689999999999999999999999999998743 3344433 467788776543 3456899999999999899
Q ss_pred HHHHHHHHhhC
Q 001096 1088 YRTVWALSKYF 1098 (1158)
Q Consensus 1088 l~i~l~ar~l~ 1098 (1158)
..++..+++.+
T Consensus 87 ~~i~~~a~~~~ 97 (457)
T 1pjq_A 87 QRVSDAAESRR 97 (457)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999999875
No 57
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.36 E-value=0.021 Score=63.74 Aligned_cols=95 Identities=15% Similarity=0.079 Sum_probs=62.5
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeC--CchHHHHhhhCCCCEEEc------cCCCHHHHHhcCccccCEEEEecC
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDV--RSDRVAIGRALDLPVYFG------DAGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~--d~~~v~~l~~~g~~vi~G------Dasd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
++.|+|.|.+|..++..|.+.|++|+++|+ ++++.+.+.+.|....+| ..++++.+.++ ++++|.||+++.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~D~vi~~v~ 80 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKC-LENAEVVLLGVS 80 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHH-HTTCSEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHH-HhcCCEEEEcCC
Confidence 478899999999999999999999999999 999998887766421111 11221122221 357999999998
Q ss_pred CchhhHHHHHHHHhhCCCceEEEEe
Q 001096 1083 TPGANYRTVWALSKYFPNVKTFVRA 1107 (1158)
Q Consensus 1083 dd~~Nl~i~l~ar~l~p~~~IIara 1107 (1158)
++...-.+. .++.+.|+..|+...
T Consensus 81 ~~~~~~v~~-~i~~l~~~~~vv~~~ 104 (335)
T 1txg_A 81 TDGVLPVMS-RILPYLKDQYIVLIS 104 (335)
T ss_dssp GGGHHHHHH-HHTTTCCSCEEEECC
T ss_pred hHHHHHHHH-HHhcCCCCCEEEEEc
Confidence 874433332 232244554444433
No 58
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.26 E-value=0.06 Score=56.11 Aligned_cols=72 Identities=22% Similarity=0.247 Sum_probs=59.8
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
.+++|.| .|.+|+.+++.|.+.|++|++++++++....+. .++.++.||.+|++.++++ ++++|+||-+.+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEV-CKGADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHH-HTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHH-hcCCCEEEEeCcC
Confidence 3588888 599999999999999999999999988754432 5788999999999998876 3468998887654
No 59
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.22 E-value=0.11 Score=57.72 Aligned_cols=108 Identities=18% Similarity=0.154 Sum_probs=71.2
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
...+.|+|.|.+|..++..|.+.|++|++.|+++++.+.+.+.|... ..+.+.+ ++++|.||++++++..--
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~~~e~----~~~aDvVi~~vp~~~~~~ 80 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHL----CESVKAA----LSASPATIFVLLDNHATH 80 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEE----CSSHHHH----HHHSSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee----cCCHHHH----HhcCCEEEEEeCCHHHHH
Confidence 34688999999999999999999999999999999998887777532 2333322 235899999999875322
Q ss_pred HHHH--HHHhhCCCceEEEEecC--hhh----HHHHHHCCCCeee
Q 001096 1089 RTVW--ALSKYFPNVKTFVRAHD--IDH----GLNLEKAGATAVV 1125 (1158)
Q Consensus 1089 ~i~l--~ar~l~p~~~IIara~d--~e~----~~~L~~aGAd~VI 1125 (1158)
.+.. .+....|. .+++-... +.. .+.+.+.|+..+-
T Consensus 81 ~v~~~~~l~~~~~g-~ivid~st~~~~~~~~l~~~~~~~g~~~vd 124 (306)
T 3l6d_A 81 EVLGMPGVARALAH-RTIVDYTTNAQDEGLALQGLVNQAGGHYVK 124 (306)
T ss_dssp HHHTSTTHHHHTTT-CEEEECCCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred HHhcccchhhccCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 2222 23334444 44444332 222 2344556765543
No 60
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=94.19 E-value=0.54 Score=66.99 Aligned_cols=60 Identities=10% Similarity=0.125 Sum_probs=36.2
Q ss_pred cchhhHHHHHhhhHHHHHHHHHhhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhH
Q 001096 264 KEEDGLLLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQMNALKAE 323 (1158)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~a~ 323 (1158)
.+-|+.+..|+++..++|+.|++.|++|.++|.+-+++.+|..+|.+.++..+..=..|+
T Consensus 2017 ~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~ 2076 (3245)
T 3vkg_A 2017 EQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSI 2076 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666777777777777777777776666665555555555555555544433333
No 61
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.13 E-value=0.11 Score=54.75 Aligned_cols=71 Identities=13% Similarity=0.108 Sum_probs=59.5
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCC-CEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDL-PVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~-~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
..++|.|. |.+|+.+++.|.++|++|+++++++++.+.+.+.++ .++.||.+ +.+.++ +.++|+||-+...
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~-~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHA-FASIDAVVFAAGS 94 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGG-GTTCSEEEECCCC
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHH-HcCCCEEEECCCC
Confidence 35888887 899999999999999999999999999988888899 99999999 333332 3478999877753
No 62
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.06 E-value=0.14 Score=56.06 Aligned_cols=68 Identities=18% Similarity=0.179 Sum_probs=54.7
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
++.|+|.|.+|..++..|.+.|++|.++|.++++.+.+.+.|... ..+.+.+ ++++|+|+++++++..
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~----~~~~D~vi~~v~~~~~ 74 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----ASTAKAI----AEQCDVIITMLPNSPH 74 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----CSSHHHH----HHHCSEEEECCSSHHH
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee----cCCHHHH----HhCCCEEEEECCCHHH
Confidence 588999999999999999999999999999999998888777543 2333222 2468999999997643
No 63
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=94.00 E-value=0.21 Score=54.86 Aligned_cols=69 Identities=20% Similarity=0.186 Sum_probs=54.7
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
.++.|+|.|.+|..++..|.+.|++|+++|.++++.+.+.+.|..+ ..+.+.+ ++++|.|+++++++..
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~----~~~~D~vi~~vp~~~~ 73 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQA----CENNQKV----AAASDIIFTSLPNAGI 73 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEE----CSSHHHH----HHHCSEEEECCSSHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCee----cCCHHHH----HhCCCEEEEECCCHHH
Confidence 3588999999999999999999999999999999998887777542 2233322 2368999999987654
No 64
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.88 E-value=0.066 Score=58.11 Aligned_cols=88 Identities=13% Similarity=0.107 Sum_probs=66.6
Q ss_pred cccccccCCcccHHHHHHHHhhCCC-CEEEEeCCc-------------------hHHHHhh----hC--CC--CEEEccC
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRS-------------------DRVAIGR----AL--DL--PVYFGDA 1060 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~-------------------~~v~~l~----~~--g~--~vi~GDa 1060 (1158)
..+++|+|.|.+|..+++.|...|+ .++++|.|. .+++.+. +. +. ..+..+.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 4689999999999999999999997 899999998 6665442 21 22 3444555
Q ss_pred CCHHHHHhcCccccCEEEEecCCchhhHHHHHHHHhhC
Q 001096 1061 GSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYF 1098 (1158)
Q Consensus 1061 sd~e~L~~AgI~~A~~VIi~t~dd~~Nl~i~l~ar~l~ 1098 (1158)
+ ++.+.+. ++++|.||.++++.+.+..+...+++.+
T Consensus 111 ~-~~~~~~~-~~~~DvVi~~~d~~~~~~~l~~~~~~~~ 146 (249)
T 1jw9_B 111 D-DAELAAL-IAEHDLVLDCTDNVAVRNQLNAGCFAAK 146 (249)
T ss_dssp C-HHHHHHH-HHTSSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred C-HhHHHHH-HhCCCEEEEeCCCHHHHHHHHHHHHHcC
Confidence 4 3444433 5689999999999988888888888765
No 65
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.86 E-value=0.14 Score=56.21 Aligned_cols=67 Identities=18% Similarity=0.114 Sum_probs=53.9
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
++.|+|.|.+|..++..|.+.|++|+++|+++++.+.+.+.|..+ ..+++.+ ++++|.|+++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~~~~~----~~~advvi~~v~~~~ 69 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQ----ASSPAEV----CAACDITIAMLADPA 69 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEE----CSCHHHH----HHHCSEEEECCSSHH
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee----cCCHHHH----HHcCCEEEEEcCCHH
Confidence 477899999999999999999999999999999998887777543 2233322 236899999999874
No 66
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=93.68 E-value=0.065 Score=59.34 Aligned_cols=71 Identities=11% Similarity=0.070 Sum_probs=59.0
Q ss_pred cccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecC
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
+++|.|. |.+|..+++.|.+.|++|++++++++..+.+.+.++.++.||.+|++.+.++ ++++|+||-+..
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vih~a~ 86 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERA-LRGLDGVIFSAG 86 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHH-TTTCSEEEEC--
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHH-HcCCCEEEECCc
Confidence 5888885 9999999999999999999999998776655555889999999999998876 346888887654
No 67
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.67 E-value=0.12 Score=56.31 Aligned_cols=87 Identities=15% Similarity=0.059 Sum_probs=61.3
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCC-EEEccCCCHHHHHhcCccccCEEEEecCCchhhHH
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLP-VYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~-vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~ 1089 (1158)
++.|+|.|.+|..++..|.+.|++|+++|.++++.+.+.+.|.. .... + +.++ .++|.|+++++.+.. ..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~---~---~~~~--~~~D~vi~av~~~~~-~~ 72 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ---D---LSLL--QTAKIIFLCTPIQLI-LP 72 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES---C---GGGG--TTCSEEEECSCHHHH-HH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccC---C---HHHh--CCCCEEEEECCHHHH-HH
Confidence 36799999999999999999999999999999999888777653 1222 2 3344 579999999987532 23
Q ss_pred HHHHHHhh-CCCceEEEEe
Q 001096 1090 TVWALSKY-FPNVKTFVRA 1107 (1158)
Q Consensus 1090 i~l~ar~l-~p~~~IIara 1107 (1158)
+...+... .|+ .+++.+
T Consensus 73 ~~~~l~~~~~~~-~~vv~~ 90 (279)
T 2f1k_A 73 TLEKLIPHLSPT-AIVTDV 90 (279)
T ss_dssp HHHHHGGGSCTT-CEEEEC
T ss_pred HHHHHHhhCCCC-CEEEEC
Confidence 33334333 344 455545
No 68
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=93.57 E-value=0.088 Score=60.97 Aligned_cols=113 Identities=12% Similarity=-0.009 Sum_probs=80.3
Q ss_pred ccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCC-CEEEccCCCHHHHHhcC----ccccCEEEEecC
Q 001096 1008 LQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDL-PVYFGDAGSREVLHKVG----AERACAAAITLD 1082 (1158)
Q Consensus 1008 l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~-~vi~GDasd~e~L~~Ag----I~~A~~VIi~t~ 1082 (1158)
.+.+++|+|.|.+++.+++.+...|++|+++|.+++.....+--+. .++.+++ .+.+.... ++.-++++++|.
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~~~~~fp~a~~~~~~~p--~~~~~~~~~~~~~~~~t~vvvlTh 280 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFATTARFPTADEVVVDWP--HRYLAAQAEAGAIDARTVVCVLTH 280 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTSCTTTCSSSSEEEESCH--HHHHHHHHHHTCCCTTCEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhcccccCCCceEEEeCCh--HHHHHhhccccCCCCCcEEEEEEC
Confidence 4678999999999999999999999999999999885433222233 4666655 55666656 788899999999
Q ss_pred CchhhHHHHHHHHhhCCCceEEEEecChhh---HHHHHHCCCC
Q 001096 1083 TPGANYRTVWALSKYFPNVKTFVRAHDIDH---GLNLEKAGAT 1122 (1158)
Q Consensus 1083 dd~~Nl~i~l~ar~l~p~~~IIara~d~e~---~~~L~~aGAd 1122 (1158)
|......+...+.+...-.+|=+.-....+ .+.|++.|.+
T Consensus 281 ~~~~D~~~L~~aL~~~~~~YIG~iGSrrk~~~~~~rL~~~G~~ 323 (386)
T 2we8_A 281 DPKFDVPLLEVALRLPDIAYIGAMGSRRTHEDRLARLREAGLT 323 (386)
T ss_dssp CHHHHHHHHHHHTTSSCCSEEEECCCHHHHHHHHHHHHHTTCC
T ss_pred ChHhHHHHHHHHhcCCCCCEEEEecChhHHHHHHHHHHhCCCC
Confidence 987777777666655412466555554443 3444556653
No 69
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=93.53 E-value=0.13 Score=55.85 Aligned_cols=66 Identities=14% Similarity=0.086 Sum_probs=52.9
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
++.|+|.|.+|..++..|.+ |++|+++|.++++.+.+.+.|..+.. +.+ -++++|.|+++++++..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~--------~~~-~~~~~D~vi~~v~~~~~ 68 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV--------PLE-RVAEARVIFTCLPTTRE 68 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC--------CGG-GGGGCSEEEECCSSHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC--------HHH-HHhCCCEEEEeCCChHH
Confidence 47889999999999999999 99999999999998888766655432 111 14579999999998753
No 70
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=93.39 E-value=0.16 Score=59.02 Aligned_cols=120 Identities=13% Similarity=0.052 Sum_probs=85.9
Q ss_pred cccccCCcccHHHHHHHHhhCC---CCEEEEeCCchHHHHhhhC-------CCCEEEccCCCHHHHHhcCcc-ccCEEEE
Q 001096 1011 HIILCGFGRVGQIIAQLLSERL---IPFVALDVRSDRVAIGRAL-------DLPVYFGDAGSREVLHKVGAE-RACAAAI 1079 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g---~~VvVID~d~~~v~~l~~~-------g~~vi~GDasd~e~L~~AgI~-~A~~VIi 1079 (1158)
+++|+|.|.+|+.+++.|.+.+ ..|++.|+++++.+.+.+. .+..+..|.+|.+.++++=-+ ++|+||.
T Consensus 3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVin 82 (405)
T 4ina_A 3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLN 82 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEEE
Confidence 5788899999999999999988 3899999999988765331 478889999999888765211 3899888
Q ss_pred ecCCchhhHHHHHHHHhhCCCceEEEE--ecCh-----------hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1080 TLDTPGANYRTVWALSKYFPNVKTFVR--AHDI-----------DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1080 ~t~dd~~Nl~i~l~ar~l~p~~~IIar--a~d~-----------e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+++.. .+..++..+.+.+. +++-. ...+ ...+..+++|+..+......++.
T Consensus 83 ~ag~~-~~~~v~~a~l~~g~--~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~PG~ 146 (405)
T 4ina_A 83 IALPY-QDLTIMEACLRTGV--PYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFDPGV 146 (405)
T ss_dssp CSCGG-GHHHHHHHHHHHTC--CEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTTTBH
T ss_pred CCCcc-cChHHHHHHHHhCC--CEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCCccH
Confidence 87754 34555555555543 33322 1121 56677788999888877766543
No 71
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.35 E-value=0.22 Score=55.85 Aligned_cols=92 Identities=13% Similarity=0.102 Sum_probs=64.9
Q ss_pred cccccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHHHhhhCCCC-EEEccCCCHHHHHhcCccccCEEEEecCCch
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIGRALDLP-VYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~~l~~~g~~-vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
...+.|+|.|.+|..++..|.+.|+ +|+++|.++++.+.+.+.|.. ....|.. +.-++++|.||++++.+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~------~~~~~~aDvVilavp~~~ 106 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA------KVEDFSPDFVMLSSPVRT 106 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTT------GGGGGCCSEEEECSCGGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHH------HHhhccCCEEEEeCCHHH
Confidence 3578999999999999999999999 999999999999888887753 2232221 102568999999998875
Q ss_pred hhHHHHHHHHh-hCCCceEEEEec
Q 001096 1086 ANYRTVWALSK-YFPNVKTFVRAH 1108 (1158)
Q Consensus 1086 ~Nl~i~l~ar~-l~p~~~IIara~ 1108 (1158)
.. .+...+.. +.|+ .+++-+.
T Consensus 107 ~~-~vl~~l~~~l~~~-~iv~d~~ 128 (314)
T 3ggo_A 107 FR-EIAKKLSYILSED-ATVTDQG 128 (314)
T ss_dssp HH-HHHHHHHHHSCTT-CEEEECC
T ss_pred HH-HHHHHHhhccCCC-cEEEECC
Confidence 33 23333333 4455 4555443
No 72
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.24 E-value=0.14 Score=56.92 Aligned_cols=112 Identities=17% Similarity=0.103 Sum_probs=71.0
Q ss_pred ccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh
Q 001096 1008 LQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1158)
Q Consensus 1008 l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N 1087 (1158)
+..++-++|.|.+|..+++.|.+.|++|++.|+++++++.+.+.|..+. .++. ++ +++++.|+++.+++..-
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~----~s~~---e~-~~~~dvvi~~l~~~~~~ 75 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVV----ENAI---DA-ITPGGIVFSVLADDAAV 75 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEEC----SSGG---GG-CCTTCEEEECCSSHHHH
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEe----CCHH---HH-HhcCCceeeeccchhhH
Confidence 3456889999999999999999999999999999999999888876542 1221 11 35789999999987543
Q ss_pred HHH--HHHHHhhCCCceEEEEec--Chh----hHHHHHHCCCCeeecCC
Q 001096 1088 YRT--VWALSKYFPNVKTFVRAH--DID----HGLNLEKAGATAVVPET 1128 (1158)
Q Consensus 1088 l~i--~l~ar~l~p~~~IIara~--d~e----~~~~L~~aGAd~VI~p~ 1128 (1158)
..+ ...+....++ .|++-.. +++ ..+.+.+.|+..+-.|-
T Consensus 76 ~~v~~~~~~~~~~~~-~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapV 123 (297)
T 4gbj_A 76 EELFSMELVEKLGKD-GVHVSMSTISPETSRQLAQVHEWYGAHYVGAPI 123 (297)
T ss_dssp HHHSCHHHHHHHCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECCE
T ss_pred HHHHHHHHHhhcCCC-eEEEECCCCChHHHHHHHHHHHhcCCceecCCc
Confidence 222 2234455554 3444333 333 34556778888876664
No 73
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.09 E-value=0.13 Score=57.72 Aligned_cols=103 Identities=18% Similarity=0.124 Sum_probs=67.0
Q ss_pred cccccccCCcccHHHHHHHHhhCC-CCEEEEeCCc-------hHHHHhhhCCCCEEEc-cCCCHHHHHhcCccccCEEEE
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERL-IPFVALDVRS-------DRVAIGRALDLPVYFG-DAGSREVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g-~~VvVID~d~-------~~v~~l~~~g~~vi~G-Dasd~e~L~~AgI~~A~~VIi 1079 (1158)
...+.|+|.|.+|..++..|.+.| ++|+++|.++ +..+.+.+.|. .. |. .+ -++++|.||+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~~s~--~e-----~~~~aDvVi~ 93 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV---EPLDD--VA-----GIACADVVLS 93 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC---EEESS--GG-----GGGGCSEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC---CCCCH--HH-----HHhcCCEEEE
Confidence 356899999999999999999999 9999999998 56666666665 22 21 11 1457999999
Q ss_pred ecCCchhhHHHHHHHHh-hCCCceEEEEecC--hhhH----HHHHHCCCCe
Q 001096 1080 TLDTPGANYRTVWALSK-YFPNVKTFVRAHD--IDHG----LNLEKAGATA 1123 (1158)
Q Consensus 1080 ~t~dd~~Nl~i~l~ar~-l~p~~~IIara~d--~e~~----~~L~~aGAd~ 1123 (1158)
+++++...-.+ ..+.. +.|+ .+++-... +... +.+.+.|+..
T Consensus 94 avp~~~~~~~~-~~i~~~l~~~-~ivv~~st~~p~~~~~~~~~l~~~g~~~ 142 (317)
T 4ezb_A 94 LVVGAATKAVA-ASAAPHLSDE-AVFIDLNSVGPDTKALAAGAIATGKGSF 142 (317)
T ss_dssp CCCGGGHHHHH-HHHGGGCCTT-CEEEECCSCCHHHHHHHHHHHHTSSCEE
T ss_pred ecCCHHHHHHH-HHHHhhcCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeE
Confidence 99887543322 33333 3344 45554443 2222 3445556544
No 74
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=93.08 E-value=0.081 Score=38.25 Aligned_cols=26 Identities=35% Similarity=0.574 Sum_probs=23.9
Q ss_pred hhHHHHHHHhhhHHHHHHHHHHHHHH
Q 001096 286 NCETELRRLQSKKEELQKEVDRLNEV 311 (1158)
Q Consensus 286 ~~~~~l~~~~~~~~~~q~~~~~~~~~ 311 (1158)
..|+++|.||....+|||.+|||.+-
T Consensus 3 rlee~~r~l~~ivq~lq~r~drle~t 28 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQERLDRLEET 28 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999874
No 75
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=93.03 E-value=0.28 Score=55.50 Aligned_cols=88 Identities=15% Similarity=0.061 Sum_probs=65.2
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHH--HHhhh-CCCCEEEcc-CCCHHHHHhcCccccCEEEEecCCc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRV--AIGRA-LDLPVYFGD-AGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v--~~l~~-~g~~vi~GD-asd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
..++|.|. |.+|+.+++.|.+.|++|++++++++.. +.+.+ .+..++.|| .+|++.+.++ ++.+|.||......
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~-~~~~d~Vi~~a~~~ 84 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTL-FEGAHLAFINTTSQ 84 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHH-HTTCSEEEECCCST
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHH-HhcCCEEEEcCCCC
Confidence 46888885 9999999999999999999999987764 34443 378889999 9999999876 56789988665432
Q ss_pred --hhhH---HHHHHHHhhC
Q 001096 1085 --GANY---RTVWALSKYF 1098 (1158)
Q Consensus 1085 --~~Nl---~i~l~ar~l~ 1098 (1158)
..|. .++..+++.+
T Consensus 85 ~~~~~~~~~~l~~aa~~~g 103 (352)
T 1xgk_A 85 AGDEIAIGKDLADAAKRAG 103 (352)
T ss_dssp TSCHHHHHHHHHHHHHHHS
T ss_pred CcHHHHHHHHHHHHHHHcC
Confidence 2333 3344455554
No 76
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=92.97 E-value=0.24 Score=56.82 Aligned_cols=109 Identities=12% Similarity=-0.030 Sum_probs=78.7
Q ss_pred ccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCC-EEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1008 LQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLP-VYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1008 l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~-vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
.+.+++|+|.|.+++.+++.+...|++|+++|..++.....+=-+.. ++.+++ .+.+....++.-.+++++|.|...
T Consensus 198 p~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~~~~fp~a~~v~~~~p--~~~~~~~~~~~~t~vvv~TH~h~~ 275 (362)
T 3on5_A 198 PKERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCEKHFFPDADEIIVDFP--ADFLRKFLIRPDDFVLIMTHHFQK 275 (362)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGCGGGCTTCSEEEESCH--HHHHHHSCCCTTCEEEECCSCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccccccccCCCceEEecCCH--HHHHhhcCCCCCeEEEEEeCCchh
Confidence 36789999999999999999999999999999998876433322333 666655 667888889999999999998766
Q ss_pred hHHHHHHHHhhCCCceEEEEecChhhHHHHHHCC
Q 001096 1087 NYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKAG 1120 (1158)
Q Consensus 1087 Nl~i~l~ar~l~p~~~IIara~d~e~~~~L~~aG 1120 (1158)
...+...+.+. |-.+| --.-+....+.|.+.|
T Consensus 276 D~~~L~~aL~~-~~~Yi-G~iGSr~R~~rl~~~g 307 (362)
T 3on5_A 276 DQEILHFLLEK-ELRYI-GILGSKERTRRLLQNR 307 (362)
T ss_dssp HHHHHHHHSSS-CCSEE-EESSCHHHHHHHHTSC
T ss_pred hHHHHHHHhcC-CCCEE-EEeCCHHHHHHHHhcC
Confidence 66666555544 33344 4444444555666555
No 77
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.97 E-value=0.068 Score=59.61 Aligned_cols=112 Identities=14% Similarity=0.083 Sum_probs=74.7
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCC-HHHHH--hcCccccCEEEEecCCchh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGS-REVLH--KVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd-~e~L~--~AgI~~A~~VIi~t~dd~~ 1086 (1158)
-++.|+|.|.+|..++..|. .|.+|+++++++++.+.+++.|+.+.. +... +.... ......+|.||+++.....
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~-~~~~~~~~~~~~~~~~~~~D~vilavK~~~~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYK-GGEEFRADCSADTSINSDFDLLVVTVKQHQL 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEE-TTEEEEECCEEESSCCSCCSEEEECCCGGGH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEec-CCCeecccccccccccCCCCEEEEEeCHHHH
Confidence 35889999999999999999 999999999999988888877876552 2110 00000 1134689999999976532
Q ss_pred hHHHHHHHHhhCCCceEEEEecChhhHHHHHHC-CCCeee
Q 001096 1087 NYRTVWALSKYFPNVKTFVRAHDIDHGLNLEKA-GATAVV 1125 (1158)
Q Consensus 1087 Nl~i~l~ar~l~p~~~IIara~d~e~~~~L~~a-GAd~VI 1125 (1158)
- .++..++...++. |+...+-....+.+.+. |.+.|+
T Consensus 81 ~-~~l~~l~~~~~~~-ivs~~nGi~~~e~l~~~~~~~~vl 118 (307)
T 3ego_A 81 Q-SVFSSLERIGKTN-ILFLQNGMGHIHDLKDWHVGHSIY 118 (307)
T ss_dssp H-HHHHHTTSSCCCE-EEECCSSSHHHHHHHTCCCSCEEE
T ss_pred H-HHHHHhhcCCCCe-EEEecCCccHHHHHHHhCCCCcEE
Confidence 1 2333344444444 66656666666677775 665553
No 78
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.83 E-value=0.18 Score=54.82 Aligned_cols=87 Identities=13% Similarity=0.108 Sum_probs=60.7
Q ss_pred cccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHHHhhhCCCCE-EEccCCCHHHHHhcCcc-ccCEEEEecCCchh
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIGRALDLPV-YFGDAGSREVLHKVGAE-RACAAAITLDTPGA 1086 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~~l~~~g~~v-i~GDasd~e~L~~AgI~-~A~~VIi~t~dd~~ 1086 (1158)
.+.|+|.|.+|..++..|.+.|+ +|+++|.++++.+.+.+.|... ...| .+ + -++ ++|+|+++++.+..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~---~~---~-~~~~~aDvVilavp~~~~ 75 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS---IA---K-VEDFSPDFVMLSSPVRTF 75 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC---GG---G-GGGTCCSEEEECSCHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCC---HH---H-HhcCCCCEEEEcCCHHHH
Confidence 47899999999999999999998 8999999999988887777641 2222 11 1 245 79999999987743
Q ss_pred hHHHHHHHHh-hCCCceEEEE
Q 001096 1087 NYRTVWALSK-YFPNVKTFVR 1106 (1158)
Q Consensus 1087 Nl~i~l~ar~-l~p~~~IIar 1106 (1158)
. .+...+.. +.|+. +++-
T Consensus 76 ~-~v~~~l~~~l~~~~-iv~~ 94 (281)
T 2g5c_A 76 R-EIAKKLSYILSEDA-TVTD 94 (281)
T ss_dssp H-HHHHHHHHHSCTTC-EEEE
T ss_pred H-HHHHHHHhhCCCCc-EEEE
Confidence 2 23333333 44553 4443
No 79
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.66 E-value=0.23 Score=55.70 Aligned_cols=91 Identities=12% Similarity=0.090 Sum_probs=61.8
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEcc-----------CCCHHHHHhcCccccCEEEE
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGD-----------AGSREVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GD-----------asd~e~L~~AgI~~A~~VIi 1079 (1158)
++.|+|.|.+|..++..|.+.|++|+++|+++++.+.+++.+...+.+. ..+.+.. +.++|.|++
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~D~vi~ 81 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA----VKDADVILI 81 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH----HTTCSEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH----HhcCCEEEE
Confidence 6889999999999999999999999999999999888866521122221 1233221 247999999
Q ss_pred ecCCchhhHHHHHHHHh-hCCCceEEEE
Q 001096 1080 TLDTPGANYRTVWALSK-YFPNVKTFVR 1106 (1158)
Q Consensus 1080 ~t~dd~~Nl~i~l~ar~-l~p~~~IIar 1106 (1158)
++..+... .+...++. +.++..|+..
T Consensus 82 ~v~~~~~~-~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 82 VVPAIHHA-SIAANIASYISEGQLIILN 108 (359)
T ss_dssp CSCGGGHH-HHHHHHGGGCCTTCEEEES
T ss_pred eCCchHHH-HHHHHHHHhCCCCCEEEEc
Confidence 99887653 33333333 3445434433
No 80
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=92.66 E-value=0.2 Score=52.60 Aligned_cols=71 Identities=20% Similarity=0.215 Sum_probs=58.4
Q ss_pred ccccccC-CcccHHHHHHHHhhC--CCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~--g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
..++|.| .|.+|+.+++.|.+. |++|++++++++..+.+ ..+..++.+|.+|++.++++ +++.|+||-+..
T Consensus 5 ~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~a~ 78 (253)
T 1xq6_A 5 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPA-FQGIDALVILTS 78 (253)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHH-HTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHH-HcCCCEEEEecc
Confidence 3577777 589999999999999 89999999998877655 45788999999999998876 346888887653
No 81
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.65 E-value=0.099 Score=59.89 Aligned_cols=98 Identities=19% Similarity=0.098 Sum_probs=68.4
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-CCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh--
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-- 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~-- 1086 (1158)
..++|+|.|.+|..+++.+...|.+|+++|.++++.+.+.+ .|.. +..|.++.+.+.++ +.++|.||.++..+..
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~-~~~~DvVi~~~g~~~~~~ 244 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKS-VQHADLLIGAVLVPGAKA 244 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHH-HHHCSEEEECCC------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHH-HhCCCEEEECCCCCcccc
Confidence 57899999999999999999999999999999998876654 5655 55677777777654 4689999998876531
Q ss_pred -hHHHHHHHHhhCCCceEEEEecC
Q 001096 1087 -NYRTVWALSKYFPNVKTFVRAHD 1109 (1158)
Q Consensus 1087 -Nl~i~l~ar~l~p~~~IIara~d 1109 (1158)
.+.....++...|...++-...+
T Consensus 245 ~~li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 245 PKLVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp -CCSCHHHHTTSCTTCEEEECC--
T ss_pred chhHHHHHHHhhcCCCEEEEEecC
Confidence 11123344555565555544433
No 82
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.52 E-value=0.14 Score=55.27 Aligned_cols=89 Identities=13% Similarity=0.073 Sum_probs=61.7
Q ss_pred cccccCCcccHHHHHHHHhhCCCC-EEEEeCCchHHHHhhhC-CCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIP-FVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~-VvVID~d~~~v~~l~~~-g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
++.|+|.|.+|..++..|.+.|++ |.++|.++++.+.+.+. |..+ ..| +.++ ++++|.|+++++++.. .
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~-~~~------~~~~-~~~~Dvvi~av~~~~~-~ 82 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEY-TTD------LAEV-NPYAKLYIVSLKDSAF-A 82 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEE-ESC------GGGS-CSCCSEEEECCCHHHH-H
T ss_pred eEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCce-eCC------HHHH-hcCCCEEEEecCHHHH-H
Confidence 688999999999999999999999 89999999998877654 6543 222 1122 4579999999988743 3
Q ss_pred HHHHHHHhhCCCceEEEEec
Q 001096 1089 RTVWALSKYFPNVKTFVRAH 1108 (1158)
Q Consensus 1089 ~i~l~ar~l~p~~~IIara~ 1108 (1158)
.+...+....+.-.+++...
T Consensus 83 ~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 83 ELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp HHHHHHHTTCCTTCEEEECC
T ss_pred HHHHHHHhhcCCCcEEEECC
Confidence 33333443332224555443
No 83
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=92.49 E-value=0.23 Score=54.30 Aligned_cols=68 Identities=24% Similarity=0.207 Sum_probs=53.6
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
++.|+|.|.+|..++..|.+.|++|+++|+++++.+.+.+.|..+. .+.+.+ ++++|.|+++++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~----~~~~~~----~~~~Dvvi~~vp~~~~ 69 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVV----SSPADV----AEKADRIITMLPTSIN 69 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEEC----SSHHHH----HHHCSEEEECCSSHHH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeec----CCHHHH----HhcCCEEEEeCCCHHH
Confidence 3678999999999999999999999999999999998887775431 233222 2368999999877644
No 84
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.39 E-value=0.48 Score=52.71 Aligned_cols=101 Identities=17% Similarity=0.091 Sum_probs=67.5
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEE--ccC--------CCHHHHHhcCccccCEEEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYF--GDA--------GSREVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~--GDa--------sd~e~L~~AgI~~A~~VIi 1079 (1158)
.++.|+|.|.+|..++..|.+.|++|+++++++ .+.+++.|+.+.. |+. ++++ . +..+|.||+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~---~--~~~~D~vil 75 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPE---E--IGPMDLVLV 75 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHH---H--HCCCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHH---H--cCCCCEEEE
Confidence 358899999999999999999999999999986 3777777765543 221 2333 2 347999999
Q ss_pred ecCCchhhHHHHHHHHh-hCCCceEEEEecChhhHHHHHH
Q 001096 1080 TLDTPGANYRTVWALSK-YFPNVKTFVRAHDIDHGLNLEK 1118 (1158)
Q Consensus 1080 ~t~dd~~Nl~i~l~ar~-l~p~~~IIara~d~e~~~~L~~ 1118 (1158)
++.....- .+...++. +.|+..|+.-.+-.+..+.+.+
T Consensus 76 avk~~~~~-~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~ 114 (312)
T 3hn2_A 76 GLKTFANS-RYEELIRPLVEEGTQILTLQNGLGNEEALAT 114 (312)
T ss_dssp CCCGGGGG-GHHHHHGGGCCTTCEEEECCSSSSHHHHHHH
T ss_pred ecCCCCcH-HHHHHHHhhcCCCCEEEEecCCCCcHHHHHH
Confidence 99776433 23333443 4456555555555555555544
No 85
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.38 E-value=0.15 Score=56.78 Aligned_cols=67 Identities=18% Similarity=0.184 Sum_probs=55.9
Q ss_pred cccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecC
Q 001096 1009 QDHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1009 ~~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
...++|.|. |-+|..+++.|.+.|++|+++++++.. .++.++.||.+|++.+.++ +++.|+||-+..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~-~~~~d~vih~A~ 86 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDA-IMGVSAVLHLGA 86 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHH-HTTCSEEEECCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHH-HhCCCEEEECCc
Confidence 457888987 999999999999999999999998765 5789999999999998776 347888876543
No 86
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.34 E-value=0.17 Score=55.26 Aligned_cols=67 Identities=13% Similarity=0.008 Sum_probs=52.7
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
++.|+|.|.+|..++..|.+.|++|+++| ++++.+.+.+.|..+ ..+.+.+ ++++|.|+++++++..
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~----~~~~~~~----~~~~D~vi~~vp~~~~ 71 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVN----VETARQV----TEFADIIFIMVPDTPQ 71 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBC----CSSHHHH----HHTCSEEEECCSSHHH
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcc----cCCHHHH----HhcCCEEEEECCCHHH
Confidence 58899999999999999999999999999 998888887766432 2233322 2468999999988753
No 87
>4hpf_A Potassium channel subfamily U member 1; PH-gated, membrane protein, transport Pro; 3.40A {Homo sapiens}
Probab=92.24 E-value=0.4 Score=59.80 Aligned_cols=116 Identities=16% Similarity=0.120 Sum_probs=81.9
Q ss_pred cccccccccccCCccc------HHHHHHHHhhCC------CCEEEEeCCchHHHHhhhC----CCCEEEccCCCHHHHHh
Q 001096 1005 TDDLQDHIILCGFGRV------GQIIAQLLSERL------IPFVALDVRSDRVAIGRAL----DLPVYFGDAGSREVLHK 1068 (1158)
Q Consensus 1005 ~~~l~~hvVIiG~G~v------G~~Ia~~L~e~g------~~VvVID~d~~~v~~l~~~----g~~vi~GDasd~e~L~~ 1068 (1158)
...+++|+|||+.+.. =+....-|+... .++|++..++-..+.+... .+.++.|++.+.+.|++
T Consensus 381 ~~~~~nhivvc~~~~~~~~~~gL~~fi~PLRa~~~~~~el~pIViL~~~~~~~~~w~~i~~Fp~Vy~~~GSpl~~~DL~r 460 (722)
T 4hpf_A 381 KYKFRNHIVACVFGDAHSAPMGLRNFVMPLRASNYTRKELKDIVFIGSLDYLQREWRFLWNFPQIYILPGCALYSGDLHA 460 (722)
T ss_dssp -CCCCSCEEEEECCCTTSCCCCSHHHHGGGGBTTSCGGGCCCEEEEECHHHHHHHGGGGTTCSSEEEEESCTTCHHHHHH
T ss_pred hccccCCEEEEeccCcccccccchhheeeccccccccccCCCEEEEeCCCCCHHHHHHHhcCCCEEEEECCcCCHHHHHh
Confidence 4567899999986542 234444455432 4677776554333333322 46778899999999999
Q ss_pred cCccccCEEEEecCC----------chhhHHHHHHHHhh-------CCCceEEEEecChhhHHHHHHCC
Q 001096 1069 VGAERACAAAITLDT----------PGANYRTVWALSKY-------FPNVKTFVRAHDIDHGLNLEKAG 1120 (1158)
Q Consensus 1069 AgI~~A~~VIi~t~d----------d~~Nl~i~l~ar~l-------~p~~~IIara~d~e~~~~L~~aG 1120 (1158)
+|+..|+.+|++..+ |..++.+.+.++++ +|++++++...++.+...+....
T Consensus 461 agi~~a~~vVIl~~~~~~~~~~~~~D~~tI~~~~~I~~l~~~~~~~~~~i~iitEL~~~sN~~fl~~~~ 529 (722)
T 4hpf_A 461 ANIEQCSMCAVLSPPPQPSSNQTLVDTEAIMATLTIGSLQIDEKSNCRKVPILTELKNPSNIHFIEQLG 529 (722)
T ss_dssp TTGGGCSEEEEECCCCCC-----CCSHHHHHHHHHHHSCCC-------CCCEEEECSSGGGHHHHHHHH
T ss_pred cCcccccEEEEEcCCCCCcccchhhhHHHHHHHHHHHHHHhhhhccCCCCcEEEEecCcccchhhcccc
Confidence 999999999998722 45667888888887 47788999999999999886543
No 88
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.17 E-value=0.57 Score=51.46 Aligned_cols=88 Identities=11% Similarity=0.029 Sum_probs=61.3
Q ss_pred ccccccCCcccHHHHHHHHhhCCC---CEEEEeCCchHHHHhhhC-CCCEEEccCCCHHHHHhcCccccCEEEEecCCch
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI---PFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~---~VvVID~d~~~v~~l~~~-g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
.++.|+|.|.+|..++..|.+.|+ +|++.|+++++.+.+.+. |+.+. . +..+. ++++|.||+++....
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~-~--~~~~~-----~~~aDvVilav~p~~ 75 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT-Q--DNRQG-----ALNADVVVLAVKPHQ 75 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE-S--CHHHH-----HSSCSEEEECSCGGG
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe-C--ChHHH-----HhcCCeEEEEeCHHH
Confidence 358899999999999999999998 899999999999888765 66542 1 11222 357999999996543
Q ss_pred hhHHHHHHHHh--hCCCceEEEEe
Q 001096 1086 ANYRTVWALSK--YFPNVKTFVRA 1107 (1158)
Q Consensus 1086 ~Nl~i~l~ar~--l~p~~~IIara 1107 (1158)
. -.+...++. +.++ .+++..
T Consensus 76 ~-~~vl~~l~~~~l~~~-~iiiS~ 97 (280)
T 3tri_A 76 I-KMVCEELKDILSETK-ILVISL 97 (280)
T ss_dssp H-HHHHHHHHHHHHTTT-CEEEEC
T ss_pred H-HHHHHHHHhhccCCC-eEEEEe
Confidence 2 233344444 3444 344443
No 89
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.16 E-value=0.18 Score=53.23 Aligned_cols=66 Identities=12% Similarity=-0.012 Sum_probs=53.6
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
.++.|+|.|.+|..+++.|.+.|++|+++|+++++.+.+.+.|..+. + +.++ ++++|.|++++..+
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-----~---~~~~-~~~~DvVi~av~~~ 94 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-----F---QEEA-VSSPEVIFVAVFRE 94 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-----E---HHHH-TTSCSEEEECSCGG
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-----c---HHHH-HhCCCEEEECCChH
Confidence 46889999999999999999999999999999999888877676542 2 2222 45799999999865
No 90
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=92.14 E-value=0.45 Score=52.04 Aligned_cols=68 Identities=18% Similarity=0.054 Sum_probs=54.8
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
.+++|.| .|.+|..+++.|.+.|++|+++++++.... +. ++.++.||.+ ++.+.++ ++++|+||-+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~-~~~~~~~-~~~~d~Vih~a~ 71 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--DYEYRVSDYT-LEDLINQ-LNDVDAVVHLAA 71 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHH-TTTCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--ceEEEEcccc-HHHHHHh-hcCCCEEEEccc
Confidence 4688888 599999999999999999999999865554 33 8999999999 9988876 358999887764
No 91
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=92.08 E-value=0.47 Score=52.88 Aligned_cols=108 Identities=15% Similarity=0.066 Sum_probs=75.8
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHHH
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~i 1090 (1158)
.+=+||.|.+|..+++.|.+.|++|++.|+++++.+.+.+.|..+ +.++..+ ++.+|.|+++.+|+..-..+
T Consensus 5 kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~----a~s~~e~----~~~~dvv~~~l~~~~~v~~V 76 (300)
T 3obb_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASA----ARSARDA----VQGADVVISMLPASQHVEGL 76 (300)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE----CSSHHHH----HTTCSEEEECCSCHHHHHHH
T ss_pred EEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEE----cCCHHHH----HhcCCceeecCCchHHHHHH
Confidence 467899999999999999999999999999999999998888543 2344433 34789999999998654444
Q ss_pred HHH----HHhhCCCceEEEEec--Ch----hhHHHHHHCCCCeeecC
Q 001096 1091 VWA----LSKYFPNVKTFVRAH--DI----DHGLNLEKAGATAVVPE 1127 (1158)
Q Consensus 1091 ~l~----ar~l~p~~~IIara~--d~----e~~~~L~~aGAd~VI~p 1127 (1158)
... +....|. ++++-.. ++ +..+.+++.|+..+--|
T Consensus 77 ~~~~~g~~~~~~~g-~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaP 122 (300)
T 3obb_A 77 YLDDDGLLAHIAPG-TLVLECSTIAPTSARKIHAAARERGLAMLDAP 122 (300)
T ss_dssp HHSSSSSTTSCCC--CEEEECSCCCHHHHHHHHHHHHTTTCEEEECC
T ss_pred HhchhhhhhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEecC
Confidence 332 1222333 4554443 33 34455667788887655
No 92
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.07 E-value=0.099 Score=56.66 Aligned_cols=68 Identities=15% Similarity=0.219 Sum_probs=57.8
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEec
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITL 1081 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t 1081 (1158)
.+++|.|.|.+|..+++.|.+.|++|++++++++.. ..++.++.||.+|++.+.++--.++|+||-+.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a 71 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPM----PAGVQTLIADVTRPDTLASIVHLRPEILVYCV 71 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCC----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcccc----ccCCceEEccCCChHHHHHhhcCCCCEEEEeC
Confidence 368999999999999999999999999999987652 36899999999999988876433589988765
No 93
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.06 E-value=0.25 Score=54.87 Aligned_cols=117 Identities=19% Similarity=0.137 Sum_probs=74.0
Q ss_pred ccccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHH--Hhh-hCCC------CEEEccCCCHHHHHhcCccccCEEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVA--IGR-ALDL------PVYFGDAGSREVLHKVGAERACAAA 1078 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~--~l~-~~g~------~vi~GDasd~e~L~~AgI~~A~~VI 1078 (1158)
.++.|+|.|.+|..++..|...|+ +|+++|.++++.+ ... ..+. .+... ++. ..++++|.||
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~-----~~~~~aD~Vi 80 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP-----EICRDADMVV 80 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG-----GGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH-----HHhCCCCEEE
Confidence 368999999999999999999998 9999999987765 221 2222 22222 122 1356899999
Q ss_pred EecCCch-----------hhH----HHHHHHHhhCCCceEEEEecChhhHHHHH----HCCCCeeecC-CcHHHH
Q 001096 1079 ITLDTPG-----------ANY----RTVWALSKYFPNVKTFVRAHDIDHGLNLE----KAGATAVVPE-TLEPSL 1133 (1158)
Q Consensus 1079 i~t~dd~-----------~Nl----~i~l~ar~l~p~~~IIara~d~e~~~~L~----~aGAd~VI~p-~~~a~~ 1133 (1158)
+++..+. .|. .++..++++.|+..++.-.+-.+....+. ..+.+.|+.. ....+.
T Consensus 81 i~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~~~~~~~~~~~~~~~~~vig~~~~l~~~ 155 (319)
T 1lld_A 81 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVAQKLTGLPENQIFGSGTNLDSA 155 (319)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHTCCTTSEEECTTHHHHH
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchHHHHHHHHHhcCCCHHHEeeccccHhHH
Confidence 9995442 222 34555666678766665555445444443 2455778755 333333
No 94
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.01 E-value=0.54 Score=53.76 Aligned_cols=107 Identities=16% Similarity=0.142 Sum_probs=72.1
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHH-HHHhcCccccCEEEEecCCchhhH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSRE-VLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e-~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
.++.|+|.|.+|..++..|.+.|++|+++|+++++++.+.+.|... ..+.+ .+..+ +.+|.|+++++++ .-.
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~e~~~~a--~~~DvVi~~vp~~-~v~ 95 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG----ARSIEEFCAKL--VKPRVVWLMVPAA-VVD 95 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC----CSSHHHHHHHS--CSSCEEEECSCGG-GHH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE----eCCHHHHHhcC--CCCCEEEEeCCHH-HHH
Confidence 4688999999999999999999999999999999999998877542 23433 33433 3459999999888 322
Q ss_pred HHHHHHHh-hCCCceEEEEecCh------hhHHHHHHCCCCee
Q 001096 1089 RTVWALSK-YFPNVKTFVRAHDI------DHGLNLEKAGATAV 1124 (1158)
Q Consensus 1089 ~i~l~ar~-l~p~~~IIara~d~------e~~~~L~~aGAd~V 1124 (1158)
.+...+.. +.|+ .+|+-..+. ...+.+.+.|+..+
T Consensus 96 ~vl~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~~~v 137 (358)
T 4e21_A 96 SMLQRMTPLLAAN-DIVIDGGNSHYQDDIRRADQMRAQGITYV 137 (358)
T ss_dssp HHHHHHGGGCCTT-CEEEECSSCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHhhCCCC-CEEEeCCCCChHHHHHHHHHHHHCCCEEE
Confidence 33333333 3344 455554432 23344555676544
No 95
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.00 E-value=0.26 Score=55.13 Aligned_cols=109 Identities=12% Similarity=0.107 Sum_probs=72.1
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccC---------CCHHHHHhcCccccCEEEE
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDA---------GSREVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDa---------sd~e~L~~AgI~~A~~VIi 1079 (1158)
..++.|+|.|.+|..++..|.+.|++|+++ .++++.+.+++.|......+. ++. .. ++.+|.||+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~---~~--~~~~D~vil 92 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDP---SA--VQGADLVLF 92 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCG---GG--GTTCSEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH---HH--cCCCCEEEE
Confidence 456899999999999999999999999999 999999888877765432110 122 22 368999999
Q ss_pred ecCCchhhHHHHHHHHhh-CCCceEEEEecChhhHHHHHH-CCCCeee
Q 001096 1080 TLDTPGANYRTVWALSKY-FPNVKTFVRAHDIDHGLNLEK-AGATAVV 1125 (1158)
Q Consensus 1080 ~t~dd~~Nl~i~l~ar~l-~p~~~IIara~d~e~~~~L~~-aGAd~VI 1125 (1158)
++..... -.+...++.. .|+..|+...+-.+..+.+.+ .| ..|+
T Consensus 93 avk~~~~-~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~-~~vl 138 (318)
T 3hwr_A 93 CVKSTDT-QSAALAMKPALAKSALVLSLQNGVENADTLRSLLE-QEVA 138 (318)
T ss_dssp CCCGGGH-HHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC-SEEE
T ss_pred EcccccH-HHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC-CcEE
Confidence 9988732 3333334333 445445555555555455543 45 4443
No 96
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=92.00 E-value=0.39 Score=63.23 Aligned_cols=18 Identities=17% Similarity=0.069 Sum_probs=8.2
Q ss_pred cHHHHHHHHHHHHHHHHH
Q 001096 150 TDELRELLMNAMKELEVA 167 (1158)
Q Consensus 150 ~~~~~~~l~~~~~~~e~a 167 (1158)
+++|++-|.+.+.+|+..
T Consensus 859 l~~L~~eL~el~~~L~~l 876 (1184)
T 1i84_S 859 MQAKDEELQRTKERQQKA 876 (1184)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444443
No 97
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=91.86 E-value=0.6 Score=55.77 Aligned_cols=114 Identities=13% Similarity=0.052 Sum_probs=73.0
Q ss_pred cccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-CC--CCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1007 DLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LD--LPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1007 ~l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-~g--~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
++...+.|+|.|.+|..++..|.+.|++|++.|+++++++.+.+ .. ..+.. ..+++.+-+ +++++|.||+++++
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~--~~s~~e~v~-~l~~aDvVil~Vp~ 84 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIG--ATSIEDFIS-KLKRPRKVMLLVKA 84 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEEC--CSSHHHHHH-TSCSSCEEEECCCS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEE--eCCHHHHHh-cCCCCCEEEEEcCC
Confidence 45677899999999999999999999999999999999988866 20 11221 234433211 34569999999998
Q ss_pred chhhHHHHHHHHhh-CCCceEEEEecChh------hHHHHHHCCCCee
Q 001096 1084 PGANYRTVWALSKY-FPNVKTFVRAHDID------HGLNLEKAGATAV 1124 (1158)
Q Consensus 1084 d~~Nl~i~l~ar~l-~p~~~IIara~d~e------~~~~L~~aGAd~V 1124 (1158)
+..--.++..+... .|+ .+|+-..+.. ..+.+.+.|+..+
T Consensus 85 ~~~v~~vl~~l~~~l~~g-~iIId~s~~~~~~~~~l~~~l~~~g~~~v 131 (497)
T 2p4q_A 85 GAPVDALINQIVPLLEKG-DIIIDGGNSHFPDSNRRYEELKKKGILFV 131 (497)
T ss_dssp SHHHHHHHHHHGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred hHHHHHHHHHHHHhCCCC-CEEEECCCCChhHHHHHHHHHHHcCCcee
Confidence 74333333334333 343 4555444322 2233455676554
No 98
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.79 E-value=0.18 Score=55.25 Aligned_cols=90 Identities=10% Similarity=0.153 Sum_probs=62.7
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
.++.|+|. |.+|..++..|.+.|++|+++|+++++.+.+.+.|..+ .+. . .-++++|.||++++++.. .
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~-----~~~---~-~~~~~aDvVi~av~~~~~-~ 81 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL-----TDG---D-GWIDEADVVVLALPDNII-E 81 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC-----CCS---S-GGGGTCSEEEECSCHHHH-H
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc-----CCH---H-HHhcCCCEEEEcCCchHH-H
Confidence 36899999 99999999999999999999999999988887766432 121 1 124679999999988752 2
Q ss_pred HHHHHHHhh-CCCceEEEEecCh
Q 001096 1089 RTVWALSKY-FPNVKTFVRAHDI 1110 (1158)
Q Consensus 1089 ~i~l~ar~l-~p~~~IIara~d~ 1110 (1158)
.+...+... .|+ .+++-....
T Consensus 82 ~v~~~l~~~l~~~-~ivv~~s~~ 103 (286)
T 3c24_A 82 KVAEDIVPRVRPG-TIVLILDAA 103 (286)
T ss_dssp HHHHHHGGGSCTT-CEEEESCSH
T ss_pred HHHHHHHHhCCCC-CEEEECCCC
Confidence 233333332 333 455544443
No 99
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.73 E-value=0.27 Score=57.52 Aligned_cols=71 Identities=24% Similarity=0.312 Sum_probs=53.0
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEE-------------c---cCCCHHHHHhcCcccc
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYF-------------G---DAGSREVLHKVGAERA 1074 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~-------------G---Dasd~e~L~~AgI~~A 1074 (1158)
++.|+|.|.+|..++..|.+.|++|+++|.|+++++.+.+.+.++.. | ..++.+. -+.++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~----~~~~a 77 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKK----AVLDS 77 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHH----HHHTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHH----HhccC
Confidence 36789999999999999999999999999999999988765443321 0 0112211 13468
Q ss_pred CEEEEecCCch
Q 001096 1075 CAAAITLDTPG 1085 (1158)
Q Consensus 1075 ~~VIi~t~dd~ 1085 (1158)
|.|+++++.+.
T Consensus 78 DvviiaVptp~ 88 (436)
T 1mv8_A 78 DVSFICVGTPS 88 (436)
T ss_dssp SEEEECCCCCB
T ss_pred CEEEEEcCCCc
Confidence 99999998764
No 100
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.66 E-value=0.22 Score=59.39 Aligned_cols=88 Identities=10% Similarity=0.064 Sum_probs=65.0
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
.+.++|+|+|.+|..+++.++..|.+|+++|.++.+.+.+.+.|+.++ +.+.+ +.++|+|+.+++++..
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~-----~l~e~----l~~aDvVi~atgt~~~-- 342 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVV-----TVEEA----IGDADIVVTATGNKDI-- 342 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-----CHHHH----GGGCSEEEECSSSSCS--
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEe-----cHHHH----HhCCCEEEECCCCHHH--
Confidence 456999999999999999999999999999999999888888887642 22222 4689999999877641
Q ss_pred HHHHHHHhhCCCceEEEEe
Q 001096 1089 RTVWALSKYFPNVKTFVRA 1107 (1158)
Q Consensus 1089 ~i~l~ar~l~p~~~IIara 1107 (1158)
.-...++...|...++-..
T Consensus 343 i~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 343 IMLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp BCHHHHHHSCTTCEEEECS
T ss_pred HHHHHHHhcCCCcEEEEeC
Confidence 1123455566665554433
No 101
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=91.56 E-value=0.31 Score=57.82 Aligned_cols=112 Identities=14% Similarity=0.018 Sum_probs=77.1
Q ss_pred ccccccCCcccHHHHHHHHhhC-CCCEEEEeCCchHHHHhhh-CCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSER-LIPFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~-g~~VvVID~d~~~v~~l~~-~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N 1087 (1158)
..++|+|.|.+|+.+++.|.+. +.+|+++++++++.+.+.+ .+..++..|..+.+.+.++ +.++|+||.+++....
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~-l~~~DvVIn~tp~~~~- 101 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKV-LADNDVVISLIPYTFH- 101 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHH-HHTSSEEEECSCGGGH-
T ss_pred CEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHH-HcCCCEEEECCchhhh-
Confidence 4689999999999999999988 7899999999998876644 3677788999998877654 3579999999886532
Q ss_pred HHHHHHHHhhCCCceEEEEec-Chh---hHHHHHHCCCCeee
Q 001096 1088 YRTVWALSKYFPNVKTFVRAH-DID---HGLNLEKAGATAVV 1125 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~IIara~-d~e---~~~~L~~aGAd~VI 1125 (1158)
..+...+.+. ...++-... ++. ..+..+++|+..+.
T Consensus 102 ~~v~~a~l~~--g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~i~ 141 (467)
T 2axq_A 102 PNVVKSAIRT--KTDVVTSSYISPALRELEPEIVKAGITVMN 141 (467)
T ss_dssp HHHHHHHHHH--TCEEEECSCCCHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHhc--CCEEEEeecCCHHHHHHHHHHHHcCCEEEe
Confidence 2223222222 223333332 222 23455677876543
No 102
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.54 E-value=0.35 Score=53.64 Aligned_cols=70 Identities=11% Similarity=0.053 Sum_probs=55.2
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N 1087 (1158)
..+.|+|.|.+|..++..|.+.|++|+++|+++++.+.+.+.|..+ . .+.+.. ++++|.|+++++++...
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-~---~~~~~~----~~~~DvVi~av~~~~~~ 100 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARL-G---RTPAEV----VSTCDITFACVSDPKAA 100 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEE-C---SCHHHH----HHHCSEEEECCSSHHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEE-c---CCHHHH----HhcCCEEEEeCCCHHHH
Confidence 4689999999999999999999999999999999988887777543 1 233221 24689999999976543
No 103
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.44 E-value=0.32 Score=52.16 Aligned_cols=67 Identities=13% Similarity=0.227 Sum_probs=51.5
Q ss_pred ccccccCCcccHHHHHHHHhhCCC----CEEEEeCCchHHHHhhh-CCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI----PFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~----~VvVID~d~~~v~~l~~-~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
.++.|+|.|.+|..+++.|.+.|+ +|++.|+++++.+.+.+ .|..+ ..+.+.+ ++++|.|+++++.+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~~~e~----~~~aDvVilav~~~ 74 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTT----TTDNNEV----AKNADILILSIKPD 74 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSCHHHH----HHHCSEEEECSCTT
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCChHHH----HHhCCEEEEEeCHH
Confidence 358899999999999999999998 99999999999988754 46543 2233222 23589999999544
No 104
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.41 E-value=0.18 Score=55.46 Aligned_cols=100 Identities=17% Similarity=0.096 Sum_probs=66.2
Q ss_pred cccccCCcccHHHHHHHHhhC-----C-CCEEEEeCCchHHHHhhh-CCCCEEE--cc-------C-CCHHHHHhcCccc
Q 001096 1011 HIILCGFGRVGQIIAQLLSER-----L-IPFVALDVRSDRVAIGRA-LDLPVYF--GD-------A-GSREVLHKVGAER 1073 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~-----g-~~VvVID~d~~~v~~l~~-~g~~vi~--GD-------a-sd~e~L~~AgI~~ 1073 (1158)
++.|+|.|.+|..++..|.+. | ++|+++|+ +++.+.+.+ .|+.+.. |+ + ++.+. +++
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 83 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAE-----VGT 83 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHH-----HCC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccc-----cCC
Confidence 589999999999999999998 8 99999998 888888877 7765543 21 0 23332 357
Q ss_pred cCEEEEecCCchhhHHHHHHHHhh-CCCceEEEEecChhhHHHHH
Q 001096 1074 ACAAAITLDTPGANYRTVWALSKY-FPNVKTFVRAHDIDHGLNLE 1117 (1158)
Q Consensus 1074 A~~VIi~t~dd~~Nl~i~l~ar~l-~p~~~IIara~d~e~~~~L~ 1117 (1158)
+|.||+++..+.. ..+...++.. .|+..|+...+.....+.+.
T Consensus 84 ~D~vil~vk~~~~-~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~ 127 (317)
T 2qyt_A 84 VDYILFCTKDYDM-ERGVAEIRPMIGQNTKILPLLNGADIAERMR 127 (317)
T ss_dssp EEEEEECCSSSCH-HHHHHHHGGGEEEEEEEEECSCSSSHHHHHT
T ss_pred CCEEEEecCcccH-HHHHHHHHhhcCCCCEEEEccCCCCcHHHHH
Confidence 9999999988754 2233333332 33433443344444444443
No 105
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=91.40 E-value=0.95 Score=44.39 Aligned_cols=113 Identities=9% Similarity=0.080 Sum_probs=73.2
Q ss_pred HHHHHHHhhCCCCEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh-HHHHHHHHh
Q 001096 1022 QIIAQLLSERLIPFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-YRTVWALSK 1096 (1158)
Q Consensus 1022 ~~Ia~~L~e~g~~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N-l~i~l~ar~ 1096 (1158)
....+.+..++.+|.+||.|+...+. +++.|+.++.-=..-.+.++.+.-...|.|++=..-|..| +.++..+|+
T Consensus 2 s~~~e~~m~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~ 81 (134)
T 3to5_A 2 SHMMEAILNKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRA 81 (134)
T ss_dssp -------CCTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHH
T ss_pred chhhHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHh
Confidence 34455566678899999999876643 3567886443111224555555556789998888887666 567778886
Q ss_pred h--CCCceEEEEecC--hhhHHHHHHCCCCeeecCCcHHHHH
Q 001096 1097 Y--FPNVKTFVRAHD--IDHGLNLEKAGATAVVPETLEPSLQ 1134 (1158)
Q Consensus 1097 l--~p~~~IIara~d--~e~~~~L~~aGAd~VI~p~~~a~~~ 1134 (1158)
. .++++||+.+.. .+......++||+..+.........
T Consensus 82 ~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~~~~L 123 (134)
T 3to5_A 82 DEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATL 123 (134)
T ss_dssp STTTTTCCEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHH
T ss_pred CCCCCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHH
Confidence 4 467777766654 4566777889999888777766653
No 106
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=91.22 E-value=0.33 Score=52.23 Aligned_cols=66 Identities=20% Similarity=0.199 Sum_probs=50.7
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeC--CchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDV--RSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~--d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
++.|+|.|.+|..++..|.+.|++|++.|. +++..+.+.+.|.. . +..+.+ +++|.|+++++++..
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~---~--~~~~~~-----~~aDvvi~~v~~~~~ 69 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT---E--TSEEDV-----YSCPVVISAVTPGVA 69 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE---E--CCHHHH-----HTSSEEEECSCGGGH
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc---C--CHHHHH-----hcCCEEEEECCCHHH
Confidence 367899999999999999999999999888 66777777666654 1 222322 468999999988743
No 107
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=91.10 E-value=0.17 Score=57.46 Aligned_cols=72 Identities=18% Similarity=0.021 Sum_probs=58.9
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
.+++|.|. |.+|..+++.|.+.|++|+++++++.........++.++.||.+|++.+.++ ++++|+||-+..
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~Vih~A~ 102 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKV-TEGVDHVFNLAA 102 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHH-HTTCSEEEECCC
T ss_pred CeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHH-hCCCCEEEECce
Confidence 46888887 8999999999999999999999987654434445788999999999988776 357899887754
No 108
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=91.08 E-value=1.5 Score=40.71 Aligned_cols=97 Identities=8% Similarity=0.030 Sum_probs=62.6
Q ss_pred CCCEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEE
Q 001096 1032 LIPFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIar 1106 (1158)
+..|.++|.|+...+. +.+.|+.+... .+..+.++.+.-...+.+++-..-+. ..+.++..+|+.+|+++||+.
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~ 85 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGATTVLA-ADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVI 85 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCEEEEE-SCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEE
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCceEEEe-CCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEE
Confidence 3467777777665432 24456666542 23345666666667888877665443 346778889999999998888
Q ss_pred ecChh--hHHHHHHCCCCeeecCCc
Q 001096 1107 AHDID--HGLNLEKAGATAVVPETL 1129 (1158)
Q Consensus 1107 a~d~e--~~~~L~~aGAd~VI~p~~ 1129 (1158)
+...+ ......++|++.++....
T Consensus 86 t~~~~~~~~~~~~~~g~~~~l~KP~ 110 (130)
T 3eod_A 86 SATENMADIAKALRLGVEDVLLKPV 110 (130)
T ss_dssp ECCCCHHHHHHHHHHCCSEEEESCC
T ss_pred EcCCCHHHHHHHHHcCCCEEEeCCC
Confidence 77654 446677899998876665
No 109
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=91.06 E-value=0.31 Score=51.26 Aligned_cols=73 Identities=12% Similarity=0.051 Sum_probs=58.2
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh--CCCCEEEccCCCHHHHHhc--CccccCEEEEecC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA--LDLPVYFGDAGSREVLHKV--GAERACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~--~g~~vi~GDasd~e~L~~A--gI~~A~~VIi~t~ 1082 (1158)
+.++|.|. |-+|+.+++.|.++|++|++++++++..+...+ .+..++.+|.+|++.++++ .....|+||-...
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 85 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 45777776 789999999999999999999999887765533 3678889999999988765 3346788877654
No 110
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.93 E-value=0.45 Score=56.53 Aligned_cols=73 Identities=22% Similarity=0.329 Sum_probs=54.6
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHh--------------cCccccC
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHK--------------VGAERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~--------------AgI~~A~ 1075 (1158)
-++.|+|.|.+|..++..|.+.|++|+++|.|+++++.+++.+.+++. +.-.+.+.+ ..+++||
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e--~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD 86 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHE--PGLKEVIARNRSAGRLRFSTDIEAAVAHGD 86 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCC--TTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCC--CCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence 458899999999999999999999999999999999999876544321 111112211 1135789
Q ss_pred EEEEecCCc
Q 001096 1076 AAAITLDTP 1084 (1158)
Q Consensus 1076 ~VIi~t~dd 1084 (1158)
.+|++++++
T Consensus 87 vviiaVptp 95 (478)
T 2y0c_A 87 VQFIAVGTP 95 (478)
T ss_dssp EEEECCCCC
T ss_pred EEEEEeCCC
Confidence 999998875
No 111
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=90.87 E-value=0.73 Score=54.87 Aligned_cols=114 Identities=15% Similarity=0.095 Sum_probs=74.3
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCC---CCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALD---LPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g---~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
.++-|+|.|.+|..++..|.+.|++|++.|.++++++.+.+.+ ..+. + ..+.+.+-+ .++++|.|+++++++..
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~-~-~~s~~e~v~-~l~~aDvVil~Vp~~~~ 81 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVV-G-AQSLKEMVS-KLKKPRRIILLVKAGQA 81 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCE-E-CSSHHHHHH-TBCSSCEEEECSCSSHH
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCcee-c-cCCHHHHHh-hccCCCEEEEecCChHH
Confidence 3588999999999999999999999999999999999887653 2222 1 133333321 24579999999998743
Q ss_pred hHHHHHHHHhh-CCCceEEEEecChh------hHHHHHHCCCCeeecC
Q 001096 1087 NYRTVWALSKY-FPNVKTFVRAHDID------HGLNLEKAGATAVVPE 1127 (1158)
Q Consensus 1087 Nl~i~l~ar~l-~p~~~IIara~d~e------~~~~L~~aGAd~VI~p 1127 (1158)
--.++..+... .|+ .+|+-..+.. ..+.+.+.|+..+-.|
T Consensus 82 v~~vl~~l~~~L~~g-~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~p 128 (484)
T 4gwg_A 82 VDDFIEKLVPLLDTG-DIIIDGGNSEYRDTTRRCRDLKAKGILFVGSG 128 (484)
T ss_dssp HHHHHHHHGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhcCCC-CEEEEcCCCCchHHHHHHHHHHhhccccccCC
Confidence 32333333333 344 5555544322 2344566677655443
No 112
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=90.82 E-value=0.63 Score=61.26 Aligned_cols=7 Identities=14% Similarity=0.159 Sum_probs=2.9
Q ss_pred EEeccCC
Q 001096 68 VFRGNSD 74 (1158)
Q Consensus 68 ~~~~~~~ 74 (1158)
|++.|..
T Consensus 683 CIkPN~~ 689 (1184)
T 1i84_S 683 CIIPNHE 689 (1184)
T ss_dssp EECCCSS
T ss_pred eeCCCCc
Confidence 4444433
No 113
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=90.74 E-value=0.082 Score=55.66 Aligned_cols=73 Identities=11% Similarity=0.073 Sum_probs=59.4
Q ss_pred ccccccC-CcccHHHHHHHHhhCCC--CEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLI--PFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
..++|.| .|.+|+.+++.|.++|+ +|++++++++..+.....+..++.+|.+|++.++++ +++.|+||-..+.
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~ag~ 94 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASA-FQGHDVGFCCLGT 94 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGG-GSSCSEEEECCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHH-hcCCCEEEECCCc
Confidence 4588888 58999999999999999 999999988765433344688899999999888765 4578998888764
No 114
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=90.72 E-value=0.99 Score=50.08 Aligned_cols=74 Identities=14% Similarity=0.067 Sum_probs=59.1
Q ss_pred cccccccCC-cccHHHHHHHHhhCCCCEEEEeCCch----HHHHhhh-------CCCCEEEccCCCHHHHHhcCccccCE
Q 001096 1009 QDHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSD----RVAIGRA-------LDLPVYFGDAGSREVLHKVGAERACA 1076 (1158)
Q Consensus 1009 ~~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~----~v~~l~~-------~g~~vi~GDasd~e~L~~AgI~~A~~ 1076 (1158)
...++|.|. |-+|..+++.|.+.|++|+++++++. ....+.. .++.++.||.+|++.+.++= +++|+
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~ 103 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM-KGVDH 103 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT-TTCSE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh-cCCCE
Confidence 356888885 89999999999999999999998643 3333333 57899999999999998763 47899
Q ss_pred EEEecCC
Q 001096 1077 AAITLDT 1083 (1158)
Q Consensus 1077 VIi~t~d 1083 (1158)
||-+...
T Consensus 104 Vih~A~~ 110 (351)
T 3ruf_A 104 VLHQAAL 110 (351)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 8877653
No 115
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=90.70 E-value=0.35 Score=52.81 Aligned_cols=89 Identities=13% Similarity=0.080 Sum_probs=61.4
Q ss_pred ccccccCCcccHHHHHHHHhhC--CCCEEEEeCCchHHHHhhhCCCC-EEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLP-VYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~--g~~VvVID~d~~~v~~l~~~g~~-vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
.++.|+|.|.+|..++..|.+. +++|+++|.++++.+.+.+.|.. ....|..+ -++++|.|+++++.+..
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~aDvVilavp~~~~ 79 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKV-------FAALADVIILAVPIKKT 79 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTT-------TGGGCSEEEECSCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHH-------hhcCCCEEEEcCCHHHH
Confidence 3588999999999999999987 67999999999998888776653 23333221 13578999999987654
Q ss_pred hHHHHHHHHhh--CCCceEEEEe
Q 001096 1087 NYRTVWALSKY--FPNVKTFVRA 1107 (1158)
Q Consensus 1087 Nl~i~l~ar~l--~p~~~IIara 1107 (1158)
..+...+... .|+ .+++-.
T Consensus 80 -~~v~~~l~~~~l~~~-~ivi~~ 100 (290)
T 3b1f_A 80 -IDFIKILADLDLKED-VIITDA 100 (290)
T ss_dssp -HHHHHHHHTSCCCTT-CEEECC
T ss_pred -HHHHHHHHhcCCCCC-CEEEEC
Confidence 3333334433 344 444433
No 116
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.70 E-value=0.11 Score=56.28 Aligned_cols=100 Identities=13% Similarity=0.029 Sum_probs=62.4
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCC---CCE-EEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALD---LPV-YFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g---~~v-i~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
++.|+|.|.+|..++..|.+.|++|+++|+++++.+.+...+ ... ..-...+++.+ +++|.||+++.++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~d~vi~~v~~~~~ 76 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFL-----ATSDLLLVTLKAWQV 76 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHH-----HTCSEEEECSCGGGH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCcccc-----CCCCEEEEEecHHhH
Confidence 378999999999999999999999999999987665443322 100 00012334433 468999999988753
Q ss_pred hHHHHHHHHh-hCCCceEEEEecChhhHHHH
Q 001096 1087 NYRTVWALSK-YFPNVKTFVRAHDIDHGLNL 1116 (1158)
Q Consensus 1087 Nl~i~l~ar~-l~p~~~IIara~d~e~~~~L 1116 (1158)
..+...++. +.|+..++...+.....+.+
T Consensus 77 -~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l 106 (291)
T 1ks9_A 77 -SDAVKSLASTLPVTTPILLIHNGMGTIEEL 106 (291)
T ss_dssp -HHHHHHHHTTSCTTSCEEEECSSSCTTGGG
T ss_pred -HHHHHHHHhhCCCCCEEEEecCCCCcHHHH
Confidence 223333333 34454455445444333333
No 117
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=90.65 E-value=0.21 Score=58.76 Aligned_cols=85 Identities=18% Similarity=0.082 Sum_probs=59.5
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
.+.++|+|+|++|+.+++.++..|.+|++.|.|+.+.......|+.+. +.+.+ +.++|.|+.++++. ++
T Consensus 247 GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv-----~LeEl----L~~ADIVv~atgt~--~l 315 (464)
T 3n58_A 247 GKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVV-----TLDDA----ASTADIVVTTTGNK--DV 315 (464)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC-----CHHHH----GGGCSEEEECCSSS--SS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceec-----cHHHH----HhhCCEEEECCCCc--cc
Confidence 356899999999999999999999999999999987666666777653 22222 34789988877653 22
Q ss_pred HHHHHHHhhCCCceEE
Q 001096 1089 RTVWALSKYFPNVKTF 1104 (1158)
Q Consensus 1089 ~i~l~ar~l~p~~~II 1104 (1158)
.-...+....|...++
T Consensus 316 I~~e~l~~MK~GAILI 331 (464)
T 3n58_A 316 ITIDHMRKMKDMCIVG 331 (464)
T ss_dssp BCHHHHHHSCTTEEEE
T ss_pred cCHHHHhcCCCCeEEE
Confidence 2233444455554433
No 118
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=90.56 E-value=0.75 Score=53.99 Aligned_cols=74 Identities=15% Similarity=0.325 Sum_probs=57.2
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHh----------cCccccCEEEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHK----------VGAERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~----------AgI~~A~~VIi 1079 (1158)
...-|+|.|.+|..++..|.+.|++|+++|.|+++++.+.+...++ .++.-++.+++ ..+++|+.+++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi--~epgl~~ll~~~~~~g~l~~ttd~~~aDvvii 89 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISI--EEPGLQEVYEEVLSSGKLKVSTTPEASDVFII 89 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSS--CCTTHHHHHHHHHHTTCEEEESSCCCCSEEEE
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCc--CCCCHHHHHHhhcccCceEEeCchhhCCEEEE
Confidence 3467899999999999999999999999999999999997654443 33333333332 12568999999
Q ss_pred ecCCch
Q 001096 1080 TLDTPG 1085 (1158)
Q Consensus 1080 ~t~dd~ 1085 (1158)
+.+++.
T Consensus 90 ~VpTp~ 95 (431)
T 3ojo_A 90 AVPTPN 95 (431)
T ss_dssp CCCCCB
T ss_pred EeCCCc
Confidence 998875
No 119
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.52 E-value=0.44 Score=55.24 Aligned_cols=101 Identities=15% Similarity=0.044 Sum_probs=66.6
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEc--------------cCCCH-HHHHhcCccccC
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFG--------------DAGSR-EVLHKVGAERAC 1075 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~G--------------Dasd~-e~L~~AgI~~A~ 1075 (1158)
++.|+|.|.+|..++..|.+ |++|+++|.|+++++.+.+.+.++..- -.+++ +. +.++|
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~-----~~~aD 75 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAA-----YKEAE 75 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHH-----HHHCS
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHH-----hcCCC
Confidence 36789999999999999999 999999999999999988776543110 01122 22 24689
Q ss_pred EEEEecCCch----------hhHHHHHHHHhhCCCceEEE-EecChhhHHHHH
Q 001096 1076 AAAITLDTPG----------ANYRTVWALSKYFPNVKTFV-RAHDIDHGLNLE 1117 (1158)
Q Consensus 1076 ~VIi~t~dd~----------~Nl~i~l~ar~l~p~~~IIa-ra~d~e~~~~L~ 1117 (1158)
.++++++.+. ....++..+..+.|+.-||. ....+...+.+.
T Consensus 76 vviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~ 128 (402)
T 1dlj_A 76 LVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMR 128 (402)
T ss_dssp EEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHH
T ss_pred EEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHH
Confidence 9999998873 12233333333666644443 344555555543
No 120
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=90.51 E-value=0.28 Score=56.10 Aligned_cols=110 Identities=15% Similarity=0.144 Sum_probs=73.0
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
...+.|+|.|..|+.+++.+++.|++++++|.+++.. ........+.+|..|.+.+.++ ++++|++....++.. .
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p--~~~~ad~~~~~~~~d~~~l~~~-~~~~dvi~~~~E~~~--~ 86 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCP--CRYVAHEFIQAKYDDEKALNQL-GQKCDVITYEFENIS--A 86 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT--TGGGSSEEEECCTTCHHHHHHH-HHHCSEEEESSTTSC--H
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCh--hhhhCCEEEECCCCCHHHHHHH-HHhCCcceecccccC--H
Confidence 4569999999999999999999999999999887632 2222345788999999998877 356787644343322 2
Q ss_pred HHHHHHHh---hCCCceEEEEecChhh-HHHHHHCCCCe
Q 001096 1089 RTVWALSK---YFPNVKTFVRAHDIDH-GLNLEKAGATA 1123 (1158)
Q Consensus 1089 ~i~l~ar~---l~p~~~IIara~d~e~-~~~L~~aGAd~ 1123 (1158)
.....+.+ ..|+...+..+.|... ...++++|+..
T Consensus 87 ~~l~~l~~~~~v~p~~~~~~~~~dK~~~k~~l~~~Gip~ 125 (377)
T 3orq_A 87 QQLKLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTKV 125 (377)
T ss_dssp HHHHHHHHHSCCTTTTHHHHHHHSHHHHHHHHHHTTCCB
T ss_pred HHHHHHhhhcCCCCCHHHHHHhcCHHHHHHHHHHCCCCC
Confidence 22222222 2355555555666543 34567777543
No 121
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.45 E-value=0.42 Score=53.31 Aligned_cols=69 Identities=17% Similarity=0.135 Sum_probs=53.7
Q ss_pred ccccccCCcccHHHHHHHHhhCCC-CEEEEeCC--chHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVR--SDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d--~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
..+.|+|.|.+|..++..|.+.|+ +|++.|.+ +++.+.+.+.|..+ ..+.+.+ ++++|.||++++++..
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~----~~~~~e~----~~~aDvVi~~vp~~~~ 96 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSC----KASVAEV----AGECDVIFSLVTAQAA 96 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEE----CSCHHHH----HHHCSEEEECSCTTTH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEE----eCCHHHH----HhcCCEEEEecCchhH
Confidence 468999999999999999999999 99999997 57778887777543 2233222 2458999999988754
No 122
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=90.43 E-value=18 Score=37.50 Aligned_cols=39 Identities=10% Similarity=0.211 Sum_probs=16.4
Q ss_pred HhhhHHHHHHHHHhhHHHHHHHhhhHHHHHHHHHHHHHH
Q 001096 273 AENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEV 311 (1158)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q~~~~~~~~~ 311 (1158)
...++.+++..+..++.++..++....+++.++..+.+.
T Consensus 109 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (284)
T 1c1g_A 109 ALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQ 147 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 333344444444444444444444444444444444333
No 123
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=90.42 E-value=0.38 Score=50.72 Aligned_cols=73 Identities=12% Similarity=0.050 Sum_probs=57.8
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh--CCCCEEEccCCCHHHHHhc--CccccCEEEEecC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA--LDLPVYFGDAGSREVLHKV--GAERACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~--~g~~vi~GDasd~e~L~~A--gI~~A~~VIi~t~ 1082 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++++..+.+.+ .+..++.+|.+|++.++++ ...+.|+||-...
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA 85 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 45778876 789999999999999999999999887765532 3678889999999988765 2335788876654
No 124
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.41 E-value=0.22 Score=58.75 Aligned_cols=72 Identities=18% Similarity=0.282 Sum_probs=52.7
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHh--------------cCccccCE
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHK--------------VGAERACA 1076 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~--------------AgI~~A~~ 1076 (1158)
++.|+|.|.+|..++..|.+.|++|+++|.|+++++.+.+ |...++ ++.-.+.+.+ .-+++||.
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~-g~~~i~-e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv 81 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNS-GTIPIY-EPGLEKMIARNVKAGRLRFGTEIEQAVPEADI 81 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TCSCCC-STTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHc-CCCccc-CCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence 5789999999999999999999999999999999998876 322221 1111111110 01457999
Q ss_pred EEEecCCc
Q 001096 1077 AAITLDTP 1084 (1158)
Q Consensus 1077 VIi~t~dd 1084 (1158)
+|++++.+
T Consensus 82 ViiaVptp 89 (450)
T 3gg2_A 82 IFIAVGTP 89 (450)
T ss_dssp EEECCCCC
T ss_pred EEEEcCCC
Confidence 99999877
No 125
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.30 E-value=0.74 Score=54.67 Aligned_cols=111 Identities=10% Similarity=0.083 Sum_probs=70.2
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCC--CCEEEccCCCHH-HHHhcCccccCEEEEecCCch
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALD--LPVYFGDAGSRE-VLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g--~~vi~GDasd~e-~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
+..+.|+|.|.+|..++..|.+.|++|++.|+++++++.+.+.. ..+.. ..+++ ... +++++|.||++++++.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~--~~s~~e~v~--~l~~aDvVil~Vp~~~ 90 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVP--YYTVKEFVE--SLETPRRILLMVKAGA 90 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEE--CSSHHHHHH--TBCSSCEEEECSCSSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEE--eCCHHHHHh--CCCCCCEEEEECCCHH
Confidence 45688999999999999999999999999999999988776531 01221 23333 232 2346999999998864
Q ss_pred hhHHHHHHHHhh-CCCceEEEEecChh------hHHHHHHCCCCee
Q 001096 1086 ANYRTVWALSKY-FPNVKTFVRAHDID------HGLNLEKAGATAV 1124 (1158)
Q Consensus 1086 ~Nl~i~l~ar~l-~p~~~IIara~d~e------~~~~L~~aGAd~V 1124 (1158)
.--.++..+... .|+ .+|+-..+.. ..+.+.+.|+..+
T Consensus 91 ~v~~vl~~l~~~l~~g-~iIId~s~g~~~~t~~l~~~l~~~g~~~v 135 (480)
T 2zyd_A 91 GTDAAIDSLKPYLDKG-DIIIDGGNTFFQDTIRRNRELSAEGFNFI 135 (480)
T ss_dssp HHHHHHHHHGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHhhcCCC-CEEEECCCCCHHHHHHHHHHHHHCCCCee
Confidence 322333334333 344 4555444322 2234455566544
No 126
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=90.20 E-value=0.21 Score=57.42 Aligned_cols=106 Identities=17% Similarity=0.113 Sum_probs=70.2
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC-CCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~-g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
..++|+|+|++|+.+++.|.+.|.+|++.|.|+++++.+.+. |...+.++ +.|. .++|.++.+...+..|.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~----~ll~----~~~DIvip~a~~~~I~~ 245 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPN----AIYG----VTCDIFAPCALGAVLND 245 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGG----GTTT----CCCSEEEECSCSCCBST
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChH----HHhc----cCCcEeeccchHHHhCH
Confidence 468999999999999999999999999999999988765443 43333221 1121 47888877654443333
Q ss_pred HHHHHHHhhCCCceEEE-EecC----hhhHHHHHHCCCCeeecCCcH
Q 001096 1089 RTVWALSKYFPNVKTFV-RAHD----IDHGLNLEKAGATAVVPETLE 1130 (1158)
Q Consensus 1089 ~i~l~ar~l~p~~~IIa-ra~d----~e~~~~L~~aGAd~VI~p~~~ 1130 (1158)
. .++.+. .++|+ .++. ++..+.|++.|+ ++.|...
T Consensus 246 ~---~~~~lg--~~iV~e~An~p~t~~ea~~~L~~~Gi--~~~Pd~~ 285 (364)
T 1leh_A 246 F---TIPQLK--AKVIAGSADNQLKDPRHGKYLHELGI--VYAPDYV 285 (364)
T ss_dssp T---HHHHCC--CSEECCSCSCCBSSHHHHHHHHHHTC--EECCHHH
T ss_pred H---HHHhCC--CcEEEeCCCCCcccHHHHHHHHhCCC--EEeccee
Confidence 3 244443 35555 4443 356788999997 4555433
No 127
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=90.07 E-value=0.31 Score=54.74 Aligned_cols=73 Identities=18% Similarity=0.065 Sum_probs=58.3
Q ss_pred ccccccC-CcccHHHHHHHHhh--CCCCEEEEeCCch-------------HHHHhhhCCCCEEEccCCCHHHHHhcCccc
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSE--RLIPFVALDVRSD-------------RVAIGRALDLPVYFGDAGSREVLHKVGAER 1073 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e--~g~~VvVID~d~~-------------~v~~l~~~g~~vi~GDasd~e~L~~AgI~~ 1073 (1158)
..++|.| .|-+|+.+++.|.+ .|++|+++++++. ........+..++.||.+|++.++++...+
T Consensus 11 ~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 90 (362)
T 3sxp_A 11 QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLH 90 (362)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhccC
Confidence 4577886 58999999999999 9999999998654 122233446789999999999999986678
Q ss_pred cCEEEEecC
Q 001096 1074 ACAAAITLD 1082 (1158)
Q Consensus 1074 A~~VIi~t~ 1082 (1158)
.|+||-+..
T Consensus 91 ~D~vih~A~ 99 (362)
T 3sxp_A 91 FDYLFHQAA 99 (362)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 999886654
No 128
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=90.06 E-value=1 Score=50.10 Aligned_cols=108 Identities=17% Similarity=0.077 Sum_probs=71.3
Q ss_pred cccccCCcccHHHHHHHHhhCC--CCEEEEeCCchHHHHhhh-C---------CCCEEEccCCCHHHHHhcCccccCEEE
Q 001096 1011 HIILCGFGRVGQIIAQLLSERL--IPFVALDVRSDRVAIGRA-L---------DLPVYFGDAGSREVLHKVGAERACAAA 1078 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g--~~VvVID~d~~~v~~l~~-~---------g~~vi~GDasd~e~L~~AgI~~A~~VI 1078 (1158)
++.|+|.|.+|..++..|...| .+|+++|.++++.+.... . ...+..+| .+ .+++||.||
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d---~~-----~~~~aDvVi 74 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WA-----ALADADVVI 74 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GG-----GGTTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCC---HH-----HhCCCCEEE
Confidence 5789999999999999999988 799999999988765432 1 12222332 21 256899999
Q ss_pred EecCCchh---------------hH----HHHHHHHhhCCCceEEEEecChhhH--HHHHH---CCCCeeecC
Q 001096 1079 ITLDTPGA---------------NY----RTVWALSKYFPNVKTFVRAHDIDHG--LNLEK---AGATAVVPE 1127 (1158)
Q Consensus 1079 i~t~dd~~---------------Nl----~i~l~ar~l~p~~~IIara~d~e~~--~~L~~---aGAd~VI~p 1127 (1158)
+++..+.. |+ .++..+++..|+..++. ..++-.. ..+.+ ....+|+--
T Consensus 75 iav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~-~tNp~~~~~~~~~~~~~~~~~rvig~ 146 (309)
T 1hyh_A 75 STLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV-ISNPVDVITALFQHVTGFPAHKVIGT 146 (309)
T ss_dssp ECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE-CSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred EecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEE-EcCcHHHHHHHHHHhcCCCHHHEeec
Confidence 99988653 33 44556666678877666 5554333 33334 333455544
No 129
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=90.01 E-value=0.44 Score=53.87 Aligned_cols=67 Identities=18% Similarity=0.096 Sum_probs=52.3
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchH-HHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDR-VAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~-v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
.+.|+|+|.+|..++..|.+.|++|++.|.+++. .+.+.+.|+.+. +.+.. +.++|.|++++++...
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-----~~~e~----~~~aDvVilavp~~~~ 85 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-----DVKTA----VAAADVVMILTPDEFQ 85 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-----CHHHH----HHTCSEEEECSCHHHH
T ss_pred EEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-----cHHHH----HhcCCEEEEeCCcHHH
Confidence 5889999999999999999999999999998766 566677787432 32211 2468999999987744
No 130
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=89.99 E-value=1.4 Score=42.95 Aligned_cols=61 Identities=8% Similarity=0.058 Sum_probs=44.8
Q ss_pred ccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEEecC--hhhHHHHHHCCCCeeecCCcHHHH
Q 001096 1073 RACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRAHD--IDHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1073 ~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIara~d--~e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
..+.|++-..-+. .-+.++..+|+.+|+++||+.+.. .+......++|++.++........
T Consensus 83 ~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~ 146 (157)
T 3hzh_A 83 NIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIVKPLDRAK 146 (157)
T ss_dssp GCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHH
T ss_pred CCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCCHHH
Confidence 4677777665443 346778889999999999888875 566677889999988776655544
No 131
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.95 E-value=0.46 Score=51.01 Aligned_cols=66 Identities=17% Similarity=0.173 Sum_probs=51.6
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC-CCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~-g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
++.|+|.|.+|..++..|.+.|++|.++|+++++.+.+.+. |..+ ..+.+.+ ++++|.|+++++..
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~----~~~~D~Vi~~v~~~ 71 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY----AMSHQDL----IDQVDLVILGIKPQ 71 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB----CSSHHHH----HHTCSEEEECSCGG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe----eCCHHHH----HhcCCEEEEEeCcH
Confidence 58899999999999999999999999999999998877643 6542 2333322 23689999999843
No 132
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.94 E-value=0.18 Score=58.32 Aligned_cols=100 Identities=15% Similarity=0.055 Sum_probs=71.2
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEcc---------C---------CCHHHHHhcC
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGD---------A---------GSREVLHKVG 1070 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GD---------a---------sd~e~L~~Ag 1070 (1158)
...++|+|.|.+|..+++.+...|.+|+++|.++++.+.+.+.|..++.-| . .+.+.+.++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~- 262 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDA- 262 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHH-
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHH-
Confidence 457999999999999999999999999999999999988888887655321 0 112334333
Q ss_pred ccccCEEEEecCCc---hhhHHHHHHHHhhCCCceEEEEecC
Q 001096 1071 AERACAAAITLDTP---GANYRTVWALSKYFPNVKTFVRAHD 1109 (1158)
Q Consensus 1071 I~~A~~VIi~t~dd---~~Nl~i~l~ar~l~p~~~IIara~d 1109 (1158)
+.++|.||.+...+ ...+.....++...|...||-.+-|
T Consensus 263 l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d 304 (381)
T 3p2y_A 263 ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGE 304 (381)
T ss_dssp HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCC
Confidence 57899998775332 2233445667777777666655544
No 133
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=89.91 E-value=0.98 Score=50.50 Aligned_cols=85 Identities=15% Similarity=0.168 Sum_probs=58.9
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~ 1089 (1158)
..+.|+|+|.+|+.+++.|...|.+|+++|++++. +...+.|... .+.+.+- .++|.|++.++....+..
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-----~~l~ell----~~aDvV~l~~p~~~~t~~ 212 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKF-----VDLETLL----KESDVVTIHVPLVESTYH 212 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEE-----CCHHHHH----HHCSEEEECCCCSTTTTT
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCccc-----cCHHHHH----hhCCEEEEecCCChHHhh
Confidence 45889999999999999999999999999999877 4455667643 1333332 368999999887543221
Q ss_pred H--HHHHHhhCCCceEE
Q 001096 1090 T--VWALSKYFPNVKTF 1104 (1158)
Q Consensus 1090 i--~l~ar~l~p~~~II 1104 (1158)
+ ...+....|...+|
T Consensus 213 li~~~~l~~mk~ga~li 229 (307)
T 1wwk_A 213 LINEERLKLMKKTAILI 229 (307)
T ss_dssp CBCHHHHHHSCTTCEEE
T ss_pred hcCHHHHhcCCCCeEEE
Confidence 1 23344555654444
No 134
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.80 E-value=0.17 Score=49.52 Aligned_cols=71 Identities=14% Similarity=0.108 Sum_probs=53.7
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHh-hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIG-RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l-~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
..+++|+|.|.+|+.+++.|...|.+|+++|+++++.+.+ ++.|..+.. ..+.+.. +.++|.||.+++.+.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~--~~~~~~~----~~~~Divi~at~~~~ 92 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVL--INDIDSL----IKNNDVIITATSSKT 92 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEE--CSCHHHH----HHTCSEEEECSCCSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEe--ecCHHHH----hcCCCEEEEeCCCCC
Confidence 4578999999999999999999999999999999988765 344544332 2332221 346899999998874
No 135
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=89.63 E-value=0.24 Score=54.52 Aligned_cols=72 Identities=14% Similarity=0.083 Sum_probs=57.3
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-------CCCCEE-EccCCCHHHHHhcCccccCEEEEe
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-------LDLPVY-FGDAGSREVLHKVGAERACAAAIT 1080 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-------~g~~vi-~GDasd~e~L~~AgI~~A~~VIi~ 1080 (1158)
..++|.|. |-+|..+++.|.+.|++|++++++++..+.+.+ .++.++ .+|.+|++.++++ +++.|+||-+
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vih~ 90 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEV-IKGAAGVAHI 90 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTT-TTTCSEEEEC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHH-HcCCCEEEEe
Confidence 46888887 999999999999999999999999876554422 356677 7999999888766 3478888876
Q ss_pred cC
Q 001096 1081 LD 1082 (1158)
Q Consensus 1081 t~ 1082 (1158)
..
T Consensus 91 A~ 92 (342)
T 1y1p_A 91 AS 92 (342)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 136
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=89.63 E-value=7.2 Score=39.47 Aligned_cols=111 Identities=22% Similarity=0.227 Sum_probs=82.2
Q ss_pred HHHhchhHHHHHHHhhhHhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCcccccCCCC
Q 001096 184 AAIALKDEAANAWNNVNVTLDMVHEIVNEECIAKEAVHKATMALSLAEARLQVAIESLQDVKQEDDYPEGSTEDDAKSDG 263 (1158)
Q Consensus 184 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (1158)
....|.++-..+-+++.|.=..=..--.+|-.-++.+...+.-|--||.|-+-|.-+..-. ++++
T Consensus 43 k~~eLEeeL~~v~~nlKsLE~seekasqrEd~yEeqIk~L~~kLKEAE~RAE~AERsv~kL---------------Ek~i 107 (155)
T 2efr_A 43 KSAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKL---------------EKSI 107 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHH
T ss_pred HHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHH
Confidence 3344566655555666553333333334466667788888889999999988887776653 2334
Q ss_pred cchhhHHHHHhhhHHHHHHHHHhhHHHHHHHhhhHHHHHHHHHHHH
Q 001096 264 KEEDGLLLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLN 309 (1158)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q~~~~~~~ 309 (1158)
.+=+..+..+++..+.++..|...=.+|..++.+--+|.+||.||.
T Consensus 108 d~lEd~L~~~Kek~~~i~~eLd~tl~el~~~~~~~~~~~~~~~~~~ 153 (155)
T 2efr_A 108 DDLEDELYAQKLKYKAISEEMKQLEDKVEELLSKNYHLENEVARLK 153 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHhh
Confidence 4456688899999999999999999999999999999999999985
No 137
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=89.61 E-value=2.5 Score=39.80 Aligned_cols=100 Identities=15% Similarity=0.158 Sum_probs=66.0
Q ss_pred CCCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEE
Q 001096 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIar 1106 (1158)
...|.++|.|+.....+ .+.|+.+..- .+-.+.++.+.-...+.+++-. .+. .-+.++..+|+.+|+++||+.
T Consensus 4 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~l 81 (142)
T 2qxy_A 4 TPTVMVVDESRITFLAVKNALEKDGFNVIWA-KNEQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVL 81 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHGGGTCEEEEE-SSHHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCCEEEEE-CCHHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEE
Confidence 45677777776654332 4456666532 2234556666656788888877 443 345678888999999998888
Q ss_pred ecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1107 AHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1107 a~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+... +......++|++.++........
T Consensus 82 s~~~~~~~~~~~~~~g~~~~l~kP~~~~~ 110 (142)
T 2qxy_A 82 SAYVDKDLIINSVKAGAVDYILKPFRLDY 110 (142)
T ss_dssp ESCCCHHHHHHHHHHTCSCEEESSCCHHH
T ss_pred ECCCCHHHHHHHHHCCcceeEeCCCCHHH
Confidence 7654 44667788999987766554444
No 138
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=89.55 E-value=0.4 Score=51.41 Aligned_cols=63 Identities=6% Similarity=-0.010 Sum_probs=50.2
Q ss_pred cccccCCcccHHHHHHHHhhCC-CCEEEEeCCchHHHHhhhC-CCCEEEccCCCHHHHHhcCccccCEEEEecC
Q 001096 1011 HIILCGFGRVGQIIAQLLSERL-IPFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g-~~VvVID~d~~~v~~l~~~-g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
++.|+|.|.+|..++..|.+.| ++|+++|+++++.+.+.+. |..+ ..|.. + -+ ++|.|+++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~-~~~~~------~-~~-~~D~vi~~v~ 66 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET-SATLP------E-LH-SDDVLILAVK 66 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE-ESSCC------C-CC-TTSEEEECSC
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEE-eCCHH------H-Hh-cCCEEEEEeC
Confidence 4779999999999999999999 9999999999998887654 6653 33332 1 13 6889888888
No 139
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.54 E-value=0.97 Score=50.51 Aligned_cols=88 Identities=10% Similarity=0.052 Sum_probs=60.5
Q ss_pred cccccCCcccHHHHHHHHhhCC----CCEEEEeCCch--HHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1011 HIILCGFGRVGQIIAQLLSERL----IPFVALDVRSD--RVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g----~~VvVID~d~~--~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
++.|+|.|.+|..++..|.+.| ++|+++|++++ +.+.+.+.|..+. .| ..+. ++++|.||+++.++
T Consensus 24 kI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~-~~--~~e~-----~~~aDvVilav~~~ 95 (322)
T 2izz_A 24 SVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLT-PH--NKET-----VQHSDVLFLAVKPH 95 (322)
T ss_dssp CEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEE-SC--HHHH-----HHHCSEEEECSCGG
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEe-CC--hHHH-----hccCCEEEEEeCHH
Confidence 5889999999999999999999 89999999986 7777777676542 22 1222 24689999999854
Q ss_pred hhhHHHHHHHHhh-CCCceEEEEec
Q 001096 1085 GANYRTVWALSKY-FPNVKTFVRAH 1108 (1158)
Q Consensus 1085 ~~Nl~i~l~ar~l-~p~~~IIara~ 1108 (1158)
.-..+...++.. .|+ .+|+-..
T Consensus 96 -~~~~vl~~l~~~l~~~-~ivvs~s 118 (322)
T 2izz_A 96 -IIPFILDEIGADIEDR-HIVVSCA 118 (322)
T ss_dssp -GHHHHHHHHGGGCCTT-CEEEECC
T ss_pred -HHHHHHHHHHhhcCCC-CEEEEeC
Confidence 333333344433 344 4555443
No 140
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.41 E-value=0.93 Score=51.24 Aligned_cols=91 Identities=19% Similarity=0.126 Sum_probs=65.3
Q ss_pred ccccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHHH----hhhC------CCCEEEccCCCHHHHHhcCccccCEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAI----GRAL------DLPVYFGDAGSREVLHKVGAERACAA 1077 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~~----l~~~------g~~vi~GDasd~e~L~~AgI~~A~~V 1077 (1158)
.++.|+|.|.+|..++..|...+. +++++|.++++++. +.+. +..+..+| ...+++||+|
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~--------~~a~~~aDvV 77 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT--------YEDCKDADIV 77 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC--------GGGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc--------HHHhCCCCEE
Confidence 468899999999999999998887 89999999987654 3321 33344443 1246789999
Q ss_pred EEecCCc-----------hhhH----HHHHHHHhhCCCceEEEEec
Q 001096 1078 AITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAH 1108 (1158)
Q Consensus 1078 Ii~t~dd-----------~~Nl----~i~l~ar~l~p~~~IIara~ 1108 (1158)
|++.+.+ ..|. .++..+.+..|+..+++-.|
T Consensus 78 vi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 78 CICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 9987653 2453 34556777889887666554
No 141
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.33 E-value=0.38 Score=51.65 Aligned_cols=70 Identities=14% Similarity=0.029 Sum_probs=50.7
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchH--------------HHHhhh-CCCCEEEccCCCHHHHHhcCccc
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDR--------------VAIGRA-LDLPVYFGDAGSREVLHKVGAER 1073 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~--------------v~~l~~-~g~~vi~GDasd~e~L~~AgI~~ 1073 (1158)
..++.|+|.|.+|..++..|.+.|++|++.|+++++ .+.+.+ .+... ..| ..+. +++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~e~-----~~~ 90 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH-LAA--FADV-----AAG 90 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE-EEE--HHHH-----HHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee-ccC--HHHH-----Hhc
Confidence 456889999999999999999999999999999987 444332 23222 111 1222 346
Q ss_pred cCEEEEecCCchh
Q 001096 1074 ACAAAITLDTPGA 1086 (1158)
Q Consensus 1074 A~~VIi~t~dd~~ 1086 (1158)
+|.||++++++..
T Consensus 91 aDvVilavp~~~~ 103 (245)
T 3dtt_A 91 AELVVNATEGASS 103 (245)
T ss_dssp CSEEEECSCGGGH
T ss_pred CCEEEEccCcHHH
Confidence 8999999988743
No 142
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.30 E-value=0.81 Score=48.22 Aligned_cols=67 Identities=13% Similarity=0.119 Sum_probs=52.8
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEE-EeCCchHHHHhhh-CCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVA-LDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvV-ID~d~~~v~~l~~-~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
..+.|+|.|.+|..++..|.+.|++|++ .|+++++.+.+.+ .|..... .+.+. +.++|.||++++..
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~---~~~~~-----~~~aDvVilavp~~ 92 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA---VELKD-----ALQADVVILAVPYD 92 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE---CCHHH-----HTTSSEEEEESCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc---ChHHH-----HhcCCEEEEeCChH
Confidence 3689999999999999999999999999 9999998887643 4665543 22332 35789999999754
No 143
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.26 E-value=0.69 Score=51.82 Aligned_cols=94 Identities=23% Similarity=0.302 Sum_probs=65.0
Q ss_pred cccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHHHhhh---C------CCCEEEccCCCHHHHHhcCccccCEEEE
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIGRA---L------DLPVYFGDAGSREVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~~l~~---~------g~~vi~GDasd~e~L~~AgI~~A~~VIi 1079 (1158)
.+.|+|.|.+|..++..|...|+ +|+++|.++++.+.... . ...+.. ++.+ .+++||.||+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~-----~~~~aDvVii 73 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYA-----DLKGSDVVIV 73 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGG-----GGTTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHH-----HhCCCCEEEE
Confidence 47799999999999999999998 99999999887765421 1 122222 2322 2578999999
Q ss_pred ecCCchh-----------h----HHHHHHHHhhCCCceEEEEecChhh
Q 001096 1080 TLDTPGA-----------N----YRTVWALSKYFPNVKTFVRAHDIDH 1112 (1158)
Q Consensus 1080 ~t~dd~~-----------N----l~i~l~ar~l~p~~~IIara~d~e~ 1112 (1158)
+++.+.. | ..++..+++..|+..++.-.|-.+.
T Consensus 74 av~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 74 AAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDV 121 (319)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHH
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHH
Confidence 9986532 2 2445566677888777665444443
No 144
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.26 E-value=0.44 Score=52.34 Aligned_cols=72 Identities=14% Similarity=0.094 Sum_probs=59.3
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-----CCCCEEEccCCCHHHHHhcCccccCEEEEecC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----LDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-----~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
++++|.| .|.+|+.++..|.+.|.+|+++++++++.+.+.+ .+..++.+|.++++.++++ ++++|.+|-+++
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~DvlVn~ag 197 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEA-VKGAHFVFTAGA 197 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHH-TTTCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHH-HHhCCEEEECCC
Confidence 4689999 8999999999999999999999999887654422 2567888999999888665 456899988885
No 145
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=89.25 E-value=0.32 Score=57.02 Aligned_cols=65 Identities=23% Similarity=0.200 Sum_probs=50.4
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
..++|+|+|++|+.+++.|+..|.+|++.|.++.+...+...|+.+. +.+ ++ +.+||.|+.++++
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~-----sL~---ea-l~~ADVVilt~gt 276 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL-----LVE---DV-VEEAHIFVTTTGN 276 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-----CHH---HH-TTTCSEEEECSSC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec-----CHH---HH-HhhCCEEEECCCC
Confidence 46899999999999999999999999999999988766667776543 222 22 3468888766654
No 146
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=89.17 E-value=1.2 Score=52.93 Aligned_cols=109 Identities=16% Similarity=0.077 Sum_probs=69.7
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-----CCCCEEEccCCCHHH-HHhcCccccCEEEEecCCc
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----LDLPVYFGDAGSREV-LHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-----~g~~vi~GDasd~e~-L~~AgI~~A~~VIi~t~dd 1084 (1158)
++.|+|.|.+|..++..|.+.|++|+++|+++++++.+.+ .|... ..+.+. ... ++++|.||++++++
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~----~~~~~e~v~~--l~~aDvVilaVp~~ 77 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLG----AHSLEEMVSK--LKKPRRIILLVKAG 77 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEE----CSSHHHHHHH--BCSSCEEEECSCTT
T ss_pred eEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEE----eCCHHHHHhh--ccCCCEEEEeCCCh
Confidence 5789999999999999999999999999999999988866 33321 233333 222 34799999999987
Q ss_pred hhhHHHHHHHHh-hCCCceEEEEecCh------hhHHHHHHCCCCeeec
Q 001096 1085 GANYRTVWALSK-YFPNVKTFVRAHDI------DHGLNLEKAGATAVVP 1126 (1158)
Q Consensus 1085 ~~Nl~i~l~ar~-l~p~~~IIara~d~------e~~~~L~~aGAd~VI~ 1126 (1158)
...-.++..+.. +.|+ .+|+-..+. ...+.+.+.|+..+-.
T Consensus 78 ~~v~~vl~~l~~~l~~g-~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~ 125 (482)
T 2pgd_A 78 QAVDNFIEKLVPLLDIG-DIIIDGGNSEYRDTMRRCRDLKDKGILFVGS 125 (482)
T ss_dssp HHHHHHHHHHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHhhcCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEeCC
Confidence 432233333333 4444 455544322 1233344556654433
No 147
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=89.04 E-value=2.1 Score=40.29 Aligned_cols=100 Identities=15% Similarity=0.100 Sum_probs=66.9
Q ss_pred CCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch---hhHHHHHHHHhhCCCceEEE
Q 001096 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG---ANYRTVWALSKYFPNVKTFV 1105 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~---~Nl~i~l~ar~l~p~~~IIa 1105 (1158)
..|.++|.|+...+.+ .+.|+.+..-. +-.+.++.+.-...+.+++-..-+. .-+.++..+|+.+|+++||+
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~ 85 (136)
T 3kto_A 7 PIIYLVDHQKDARAALSKLLSPLDVTIQCFA-SAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIV 85 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTSSSEEEEES-SHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHHCCcEEEEeC-CHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEE
Confidence 4677777777654433 34566665322 2344555555566788777665544 34678888999999999888
Q ss_pred EecChh--hHHHHHHCCCCeeecCCcHHHH
Q 001096 1106 RAHDID--HGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1106 ra~d~e--~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.+...+ ......++|++.++........
T Consensus 86 ~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~ 115 (136)
T 3kto_A 86 MASSSDIPTAVRAMRASAADFIEKPFIEHV 115 (136)
T ss_dssp EESSCCHHHHHHHHHTTCSEEEESSBCHHH
T ss_pred EEcCCCHHHHHHHHHcChHHheeCCCCHHH
Confidence 877554 4666778999998877665554
No 148
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.03 E-value=0.49 Score=52.79 Aligned_cols=108 Identities=15% Similarity=0.166 Sum_probs=67.2
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEE---ccC--------CCHHHHHhcCccccCEEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYF---GDA--------GSREVLHKVGAERACAAA 1078 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~---GDa--------sd~e~L~~AgI~~A~~VI 1078 (1158)
.++.|+|.|.+|..++..|.+.|++|+++++++ .+.+++.|+.+-. |+. .++ .++ .+.+|+||
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~---~~~-~~~~DlVi 76 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSA---AEL-ETKPDCTL 76 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCG---GGC-SSCCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCH---HHc-CCCCCEEE
Confidence 368899999999999999999999999999986 2666665643322 221 121 222 24799999
Q ss_pred EecCCchhhHHHHHHHHh-hCCCceEEEEecChhhHHHHHH-CCCCee
Q 001096 1079 ITLDTPGANYRTVWALSK-YFPNVKTFVRAHDIDHGLNLEK-AGATAV 1124 (1158)
Q Consensus 1079 i~t~dd~~Nl~i~l~ar~-l~p~~~IIara~d~e~~~~L~~-aGAd~V 1124 (1158)
+++.....- .+...++. +.|+..|+...+-....+.+.+ .+...|
T Consensus 77 lavK~~~~~-~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~~v 123 (320)
T 3i83_A 77 LCIKVVEGA-DRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDNEV 123 (320)
T ss_dssp ECCCCCTTC-CHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTSCE
T ss_pred EecCCCChH-HHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCCcE
Confidence 999776432 22333333 3455555555554454455543 344433
No 149
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.03 E-value=0.47 Score=54.18 Aligned_cols=93 Identities=13% Similarity=0.043 Sum_probs=60.7
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEE-Ecc---------CCCHHHHHhcCccccCEEEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVY-FGD---------AGSREVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi-~GD---------asd~e~L~~AgI~~A~~VIi 1079 (1158)
.++.|+|.|.+|..++..|.+.|++|+++|.++++++.+++.+.+.. ..+ .+|.+ ++ ++++|.||+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~---ea-~~~aDvVil 105 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLK---AS-LEGVTDILI 105 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHH---HH-HTTCCEEEE
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHH---HH-HhcCCEEEE
Confidence 46899999999999999999999999999999999888766442210 000 02221 11 357899999
Q ss_pred ecCCchhhHHHHHHHHhh-CCCceEEEEe
Q 001096 1080 TLDTPGANYRTVWALSKY-FPNVKTFVRA 1107 (1158)
Q Consensus 1080 ~t~dd~~Nl~i~l~ar~l-~p~~~IIara 1107 (1158)
+++... --.++..++.. .|+..++.-.
T Consensus 106 aVp~~~-~~~vl~~i~~~l~~~~ivvs~~ 133 (356)
T 3k96_A 106 VVPSFA-FHEVITRMKPLIDAKTRIAWGT 133 (356)
T ss_dssp CCCHHH-HHHHHHHHGGGCCTTCEEEECC
T ss_pred CCCHHH-HHHHHHHHHHhcCCCCEEEEEe
Confidence 998752 22233334433 3444444333
No 150
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=89.00 E-value=0.4 Score=52.22 Aligned_cols=69 Identities=14% Similarity=-0.037 Sum_probs=55.7
Q ss_pred cccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecC
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
.++|.|. |-+|+.+++.|.++|++|++++++++........+..++.+|.+|++ +.++- +. |+||-+..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~-~~-d~vih~A~ 71 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGI-KG-DVVFHFAA 71 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTC-CC-SEEEECCS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhc-CC-CEEEECCC
Confidence 4778887 89999999999999999999999877655555668899999999998 65543 33 88876654
No 151
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=88.88 E-value=0.51 Score=53.06 Aligned_cols=72 Identities=13% Similarity=0.154 Sum_probs=58.9
Q ss_pred ccccccC-CcccHHHHHHHHhhC-CC-CEEEEeCCchHHHHhh----hCCCCEEEccCCCHHHHHhcCccccCEEEEecC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSER-LI-PFVALDVRSDRVAIGR----ALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~-g~-~VvVID~d~~~v~~l~----~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
+.++|.| .|.+|..+++.|.+. |. +|+++++++.+...+. ..++.++.||.+|++.++++ +++.|+||-+..
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~D~Vih~Aa 100 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYA-LEGVDICIHAAA 100 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHH-TTTCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHH-HhcCCEEEECCC
Confidence 4578888 599999999999998 97 9999999988765443 24788899999999998876 347899887764
No 152
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.88 E-value=0.57 Score=51.35 Aligned_cols=41 Identities=20% Similarity=0.286 Sum_probs=36.9
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA 1050 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~ 1050 (1158)
.++.|+|.|.+|..++..|...|++|+++|.+++..+.+.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 45 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKK 45 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 46889999999999999999999999999999998876654
No 153
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=88.74 E-value=2.9 Score=38.06 Aligned_cols=101 Identities=18% Similarity=0.132 Sum_probs=64.7
Q ss_pred CCEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh-HHHHHHHHhhCCCceEEEEe
Q 001096 1033 IPFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-YRTVWALSKYFPNVKTFVRA 1107 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N-l~i~l~ar~l~p~~~IIara 1107 (1158)
..+.++|.|+..... +...|+.++.--.+..+.++.+.-.+.+.+++-..-+..+ +.++..+|+.+|..++++.+
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~~g~~vv~~~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s 82 (120)
T 1tmy_A 3 KRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCS 82 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhhcCcEEEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEe
Confidence 467788877665433 2445776432222234455554445678888777665433 56778888888988888877
Q ss_pred cCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1108 HDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1108 ~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
... +......++|++..+........
T Consensus 83 ~~~~~~~~~~~~~~g~~~~l~KP~~~~~ 110 (120)
T 1tmy_A 83 AMGQQAMVIEAIKAGAKDFIVKPFQPSR 110 (120)
T ss_dssp CTTCHHHHHHHHHTTCCEEEESSCCHHH
T ss_pred CCCCHHHHHHHHHhCcceeEeCCCCHHH
Confidence 654 44566778999988766555444
No 154
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=88.74 E-value=1.1 Score=41.82 Aligned_cols=97 Identities=19% Similarity=0.206 Sum_probs=63.2
Q ss_pred CEEEEeCCchHHHHh----hhCCCCEE--EccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEE
Q 001096 1034 PFVALDVRSDRVAIG----RALDLPVY--FGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1034 ~VvVID~d~~~v~~l----~~~g~~vi--~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIar 1106 (1158)
.+.++|.|+...+.+ .+.|+.++ ..++.+ .++.+.-...+.+++-..-+. ..+.++..+|+.+|+.+||+.
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~--a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~ 80 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGS--AVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIV 80 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTEEEEEEESSSTT--HHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEE
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCcEEEEEcCCHHH--HHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEE
Confidence 567777777655433 44566665 233333 333333346788888776554 346788899999999998888
Q ss_pred ecChh--hHHHHHHCCCCeeecCCcHHH
Q 001096 1107 AHDID--HGLNLEKAGATAVVPETLEPS 1132 (1158)
Q Consensus 1107 a~d~e--~~~~L~~aGAd~VI~p~~~a~ 1132 (1158)
+...+ ......++|++.++.......
T Consensus 81 s~~~~~~~~~~~~~~g~~~~l~kp~~~~ 108 (134)
T 3f6c_A 81 SAKNDHFYGKHCADAGANGFVSKKEGMN 108 (134)
T ss_dssp ECC---CTHHHHHHTTCSEEEEGGGCTH
T ss_pred eCCCChHHHHHHHHhCCCEEEeCCCCHH
Confidence 77554 677778999998876654443
No 155
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=88.67 E-value=1.2 Score=52.80 Aligned_cols=95 Identities=11% Similarity=0.067 Sum_probs=62.5
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCC--CCEEEccCCCHHHHHhcCccccCEEEEecCCchhh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALD--LPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g--~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N 1087 (1158)
.++.|+|.|.+|..++..|.+.|++|.++|+++++.+.+.+.. ..+.. ..+.+.+-+ +++++|.|+++++++...
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~--~~s~~e~v~-~l~~aDvVilavp~~~~v 82 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVF--TKTLEEFVG-SLEKPRRIMLMVQAGAAT 82 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEE--CSSHHHHHH-TBCSSCEEEECCCTTHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEE--eCCHHHHHh-hccCCCEEEEEccCchHH
Confidence 4688999999999999999999999999999999988775431 11221 233332211 234699999999986433
Q ss_pred HHHHHHHHh-hCCCceEEEEec
Q 001096 1088 YRTVWALSK-YFPNVKTFVRAH 1108 (1158)
Q Consensus 1088 l~i~l~ar~-l~p~~~IIara~ 1108 (1158)
-.+...+.. +.|+ .+|+-..
T Consensus 83 ~~vl~~l~~~l~~g-~iiId~s 103 (474)
T 2iz1_A 83 DATIKSLLPLLDIG-DILIDGG 103 (474)
T ss_dssp HHHHHHHGGGCCTT-CEEEECS
T ss_pred HHHHHHHHhhCCCC-CEEEECC
Confidence 333333333 3344 4444444
No 156
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=88.66 E-value=0.6 Score=52.05 Aligned_cols=72 Identities=14% Similarity=0.081 Sum_probs=57.0
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCch----HHHHhh-------hCCCCEEEccCCCHHHHHhcCccccCEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSD----RVAIGR-------ALDLPVYFGDAGSREVLHKVGAERACAA 1077 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~----~v~~l~-------~~g~~vi~GDasd~e~L~~AgI~~A~~V 1077 (1158)
..++|.|. |.+|..+++.|.+.|++|+++++++. ..+.+. ..++.++.||.+|++.++++ ++++|+|
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~v 106 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA-CAGVDYV 106 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH-HTTCSEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHH-hcCCCEE
Confidence 35888887 99999999999999999999998753 333222 25788999999999988775 3478998
Q ss_pred EEecC
Q 001096 1078 AITLD 1082 (1158)
Q Consensus 1078 Ii~t~ 1082 (1158)
|-+..
T Consensus 107 ih~A~ 111 (352)
T 1sb8_A 107 LHQAA 111 (352)
T ss_dssp EECCS
T ss_pred EECCc
Confidence 88765
No 157
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.59 E-value=0.39 Score=53.99 Aligned_cols=68 Identities=13% Similarity=0.121 Sum_probs=53.5
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEcc---------CCCHHHHHhcCccccCEEEEec
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGD---------AGSREVLHKVGAERACAAAITL 1081 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GD---------asd~e~L~~AgI~~A~~VIi~t 1081 (1158)
++.|+|.|.+|..++..|.+.|++|++++++ ++.+.+++.|..+...+ ..+++. +..+|.||+++
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~D~Vilav 78 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-----LGEQDVVIVAV 78 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-----HCCCSEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-----cCCCCEEEEeC
Confidence 5889999999999999999999999999986 67777887787654311 124432 35799999999
Q ss_pred CCc
Q 001096 1082 DTP 1084 (1158)
Q Consensus 1082 ~dd 1084 (1158)
...
T Consensus 79 k~~ 81 (335)
T 3ghy_A 79 KAP 81 (335)
T ss_dssp CHH
T ss_pred Cch
Confidence 875
No 158
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=88.29 E-value=3.9 Score=38.64 Aligned_cols=102 Identities=15% Similarity=0.138 Sum_probs=67.7
Q ss_pred CCCEEEEeCCchHHHH----hhhCCCCEEEccCCC-HHHHHhcCccccCEEEEecCCchh-hHHHHHHHHh--hCCCceE
Q 001096 1032 LIPFVALDVRSDRVAI----GRALDLPVYFGDAGS-REVLHKVGAERACAAAITLDTPGA-NYRTVWALSK--YFPNVKT 1103 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~----l~~~g~~vi~GDasd-~e~L~~AgI~~A~~VIi~t~dd~~-Nl~i~l~ar~--l~p~~~I 1103 (1158)
...|.++|.|+...+. +.+.|+.....-+.+ .+.++.+.-...+.+++-..-+.. -+.++..+|+ .+|+++|
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pi 84 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPI 84 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCE
Confidence 3467788877765543 345566633333333 455666666678888877665543 3567788888 6788888
Q ss_pred EEEecC--hhhHHHHHHCCCCeeecCCc-HHHH
Q 001096 1104 FVRAHD--IDHGLNLEKAGATAVVPETL-EPSL 1133 (1158)
Q Consensus 1104 Iara~d--~e~~~~L~~aGAd~VI~p~~-~a~~ 1133 (1158)
|+.+.. .+......++|++.++.... ....
T Consensus 85 i~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~ 117 (144)
T 3kht_A 85 VILTDNVSDDRAKQCMAAGASSVVDKSSNNVTD 117 (144)
T ss_dssp EEEETTCCHHHHHHHHHTTCSEEEECCTTSHHH
T ss_pred EEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHH
Confidence 888854 55666778899999887766 4433
No 159
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=88.28 E-value=0.56 Score=55.96 Aligned_cols=84 Identities=13% Similarity=0.036 Sum_probs=58.8
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
...+.|+|+|++|+.+++.|+..|.+|++.|.++.........|+.+. + ++++ +.++|.|+++++.. ++
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~-----~---l~el-l~~aDiVi~~~~t~--~l 345 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVV-----T---MEYA-ADKADIFVTATGNY--HV 345 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEEC-----C---HHHH-TTTCSEEEECSSSS--CS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeC-----C---HHHH-HhcCCEEEECCCcc--cc
Confidence 346899999999999999999999999999999987644555666542 2 3222 46899999988433 22
Q ss_pred HHHHHHHhhCCCceE
Q 001096 1089 RTVWALSKYFPNVKT 1103 (1158)
Q Consensus 1089 ~i~l~ar~l~p~~~I 1103 (1158)
.-...++...|...+
T Consensus 346 I~~~~l~~MK~gAil 360 (494)
T 3d64_A 346 INHDHMKAMRHNAIV 360 (494)
T ss_dssp BCHHHHHHCCTTEEE
T ss_pred cCHHHHhhCCCCcEE
Confidence 223345555555443
No 160
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=88.19 E-value=0.58 Score=49.03 Aligned_cols=49 Identities=14% Similarity=0.161 Sum_probs=41.5
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
..+.|+|.|.+|..++..|.+.|++|+++|++++ .++++|.|++++..+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~--------------------------~~~~aD~vi~av~~~ 68 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ--------------------------ATTLGEIVIMAVPYP 68 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC--------------------------CSSCCSEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH--------------------------HhccCCEEEEcCCcH
Confidence 3588999999999999999999999999998865 356788888888743
No 161
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=88.13 E-value=1.1 Score=53.17 Aligned_cols=93 Identities=14% Similarity=0.110 Sum_probs=61.8
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC-CC-----CEEEccCCCHH-HHHhcCccccCEEEEecCC
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-DL-----PVYFGDAGSRE-VLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~-g~-----~vi~GDasd~e-~L~~AgI~~A~~VIi~t~d 1083 (1158)
++.|+|.|.+|..++..|.+.|++|+++|+++++++.+.+. |. .+.. ..+.+ .... ++++|.|++++++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~--~~~~~e~v~~--l~~aDvVilaVp~ 78 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKA--FETMEAFAAS--LKKPRKALILVQA 78 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE--CSCHHHHHHH--BCSSCEEEECCCC
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEE--ECCHHHHHhc--ccCCCEEEEecCC
Confidence 47889999999999999999999999999999998877653 41 1221 23433 3332 3469999999998
Q ss_pred chhhHHHHHHHHh-hCCCceEEEEec
Q 001096 1084 PGANYRTVWALSK-YFPNVKTFVRAH 1108 (1158)
Q Consensus 1084 d~~Nl~i~l~ar~-l~p~~~IIara~ 1108 (1158)
+...-.++..+.. +.|+ .+|+-..
T Consensus 79 ~~~v~~vl~~l~~~l~~g-~iIId~s 103 (478)
T 1pgj_A 79 GAATDSTIEQLKKVFEKG-DILVDTG 103 (478)
T ss_dssp SHHHHHHHHHHHHHCCTT-CEEEECC
T ss_pred hHHHHHHHHHHHhhCCCC-CEEEECC
Confidence 6432223333333 4455 4444443
No 162
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=88.10 E-value=1.9 Score=40.45 Aligned_cols=60 Identities=32% Similarity=0.367 Sum_probs=46.0
Q ss_pred HHHHhhhHHHHHHHHHhhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-------HHhhhHHHHHHH
Q 001096 270 LLAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQM-------NALKAEEDVANI 329 (1158)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q~~~~~~~~~~~~~~~-------~~~~a~~~~~~~ 329 (1158)
...++.+.++........|.++..||.|..-++.++++.++-+..++- .+.+||.+|+++
T Consensus 25 ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~AE~evasL 91 (101)
T 3u59_A 25 AEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEAEVASL 91 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666777777888888999999999999999999987777766654 456677777664
No 163
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.00 E-value=0.54 Score=52.71 Aligned_cols=71 Identities=15% Similarity=0.190 Sum_probs=53.9
Q ss_pred ccccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCE----------EEccCCCHHHHHhcCccccC
Q 001096 1006 DDLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPV----------YFGDAGSREVLHKVGAERAC 1075 (1158)
Q Consensus 1006 ~~l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~v----------i~GDasd~e~L~~AgI~~A~ 1075 (1158)
.++..++.|+|.|.+|..++..|.+.|++|+++++++++.+.+.+.|.+. ... + ..+ ++.+|
T Consensus 11 ~~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~---~---~~~--~~~aD 82 (335)
T 1z82_A 11 HHMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATN---D---LEE--IKKED 82 (335)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEES---C---GGG--CCTTE
T ss_pred cccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeC---C---HHH--hcCCC
Confidence 34566799999999999999999999999999999999998887766321 111 1 112 56789
Q ss_pred EEEEecCCc
Q 001096 1076 AAAITLDTP 1084 (1158)
Q Consensus 1076 ~VIi~t~dd 1084 (1158)
+||+++.+.
T Consensus 83 vVil~vk~~ 91 (335)
T 1z82_A 83 ILVIAIPVQ 91 (335)
T ss_dssp EEEECSCGG
T ss_pred EEEEECCHH
Confidence 999999863
No 164
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=87.73 E-value=0.57 Score=49.05 Aligned_cols=74 Identities=14% Similarity=0.075 Sum_probs=56.3
Q ss_pred cccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC--CCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1009 QDHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL--DLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1009 ~~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~--g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
.+.++|.| .|.+|+.+++.|.++|++|++++++++..+.+.+. +..++.+|.+|++.++++= ..+.|++|-
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN 84 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 34577776 56799999999999999999999998877655332 6788999999998776531 125678776
Q ss_pred ecC
Q 001096 1080 TLD 1082 (1158)
Q Consensus 1080 ~t~ 1082 (1158)
..+
T Consensus 85 ~Ag 87 (234)
T 2ehd_A 85 NAG 87 (234)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 165
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=87.67 E-value=0.52 Score=50.57 Aligned_cols=74 Identities=16% Similarity=0.093 Sum_probs=56.1
Q ss_pred cccccccCC-cc-cHHHHHHHHhhCCCCEEEEeCCchHHHHhh----h---CCCCEEEccCCCHHHHHhcC------ccc
Q 001096 1009 QDHIILCGF-GR-VGQIIAQLLSERLIPFVALDVRSDRVAIGR----A---LDLPVYFGDAGSREVLHKVG------AER 1073 (1158)
Q Consensus 1009 ~~hvVIiG~-G~-vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~---~g~~vi~GDasd~e~L~~Ag------I~~ 1073 (1158)
.+.++|.|. |. +|+.+++.|.++|..|++++++++..+... + ..+.++.+|.+|++.++++= ..+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 101 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGR 101 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCC
Confidence 346888998 64 999999999999999999999988765432 2 24678889999998876541 125
Q ss_pred cCEEEEecC
Q 001096 1074 ACAAAITLD 1082 (1158)
Q Consensus 1074 A~~VIi~t~ 1082 (1158)
.|++|-..+
T Consensus 102 id~li~~Ag 110 (266)
T 3o38_A 102 LDVLVNNAG 110 (266)
T ss_dssp CCEEEECCC
T ss_pred CcEEEECCC
Confidence 677776654
No 166
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.57 E-value=1.2 Score=52.97 Aligned_cols=74 Identities=22% Similarity=0.384 Sum_probs=52.7
Q ss_pred ccccccCCcccHHHHHHHHhhC--CCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHh-------------cCcccc
Q 001096 1010 DHIILCGFGRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHK-------------VGAERA 1074 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~--g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~-------------AgI~~A 1074 (1158)
.++.|+|.|.+|..++..|.+. |++|+++|.|+++++.+.+.+.++.. +.-.+.+.+ ..+.++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e--~gl~~~~~~~~~~~l~~t~~~~~~~~~a 87 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYE--PGLDEIVFAARGRNLFFSSDIPKAIAEA 87 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCC--TTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCC--CCHHHHHHHhhcCCEEEECCHHHHhhcC
Confidence 3689999999999999999988 79999999999999988764433221 110111110 113478
Q ss_pred CEEEEecCCch
Q 001096 1075 CAAAITLDTPG 1085 (1158)
Q Consensus 1075 ~~VIi~t~dd~ 1085 (1158)
|.||++++++.
T Consensus 88 Dvvii~Vptp~ 98 (481)
T 2o3j_A 88 DLIFISVNTPT 98 (481)
T ss_dssp SEEEECCCCCB
T ss_pred CEEEEecCCcc
Confidence 99999987653
No 167
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=87.55 E-value=1.7 Score=49.35 Aligned_cols=85 Identities=9% Similarity=0.063 Sum_probs=58.4
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~ 1089 (1158)
..+.|+|+|.+|+.+++.|+..|.+|++.|++++. +...+.|... .+.+.+ +.++|.|++.++....+..
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-----~~l~el----l~~aDvV~l~~P~t~~t~~ 235 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ-----LPLEEI----WPLCDFITVHTPLLPSTTG 235 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE-----CCHHHH----GGGCSEEEECCCCCTTTTT
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee-----CCHHHH----HhcCCEEEEecCCCHHHHH
Confidence 45889999999999999999999999999998766 3455566542 233332 3479999999987643322
Q ss_pred H--HHHHHhhCCCceEE
Q 001096 1090 T--VWALSKYFPNVKTF 1104 (1158)
Q Consensus 1090 i--~l~ar~l~p~~~II 1104 (1158)
+ ...+....|...+|
T Consensus 236 li~~~~l~~mk~gailI 252 (335)
T 2g76_A 236 LLNDNTFAQCKKGVRVV 252 (335)
T ss_dssp SBCHHHHTTSCTTEEEE
T ss_pred hhCHHHHhhCCCCcEEE
Confidence 2 23344555554333
No 168
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=87.54 E-value=0.52 Score=55.99 Aligned_cols=85 Identities=13% Similarity=0.095 Sum_probs=59.7
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
...+.|+|+|++|+.+++.++..|.+|+++|.++.......+.|+.+ .+ ++++ +.++|.|++++... ++
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~-----~~---l~el-l~~aDiVi~~~~t~--~l 325 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV-----VT---LDEI-VDKGDFFITCTGNV--DV 325 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE-----CC---HHHH-TTTCSEEEECCSSS--SS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe-----cC---HHHH-HhcCCEEEECCChh--hh
Confidence 34689999999999999999999999999999998765566667643 23 2222 46799998887443 22
Q ss_pred HHHHHHHhhCCCceEE
Q 001096 1089 RTVWALSKYFPNVKTF 1104 (1158)
Q Consensus 1089 ~i~l~ar~l~p~~~II 1104 (1158)
.-...++...|...++
T Consensus 326 I~~~~l~~MK~gaili 341 (479)
T 1v8b_A 326 IKLEHLLKMKNNAVVG 341 (479)
T ss_dssp BCHHHHTTCCTTCEEE
T ss_pred cCHHHHhhcCCCcEEE
Confidence 2223445555654443
No 169
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=87.37 E-value=2.8 Score=40.12 Aligned_cols=101 Identities=13% Similarity=-0.053 Sum_probs=64.7
Q ss_pred CCEEEEeCCchHHHHh----hhCCCCEEEccCC-CHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEE
Q 001096 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAG-SREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~~~g~~vi~GDas-d~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIar 1106 (1158)
..|+++|.|+...+.+ ...|......-.. -.+.++.+.-...+.+++-..-+. .-+.++..+|+.+|+++||+.
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~l 100 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVV 100 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEE
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEE
Confidence 3566676666554433 2233112222222 245556666667888887766443 346788889999999999888
Q ss_pred ecChh--hHHHHHHCCCCeeecCCcHHHH
Q 001096 1107 AHDID--HGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1107 a~d~e--~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+...+ ......++|++.++........
T Consensus 101 s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~ 129 (150)
T 4e7p_A 101 TTFKRAGYFERAVKAGVDAYVLKERSIAD 129 (150)
T ss_dssp ESCCCHHHHHHHHHTTCSEEEETTSCHHH
T ss_pred eCCCCHHHHHHHHHCCCcEEEecCCCHHH
Confidence 87654 6777789999988877665544
No 170
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=87.34 E-value=0.92 Score=48.00 Aligned_cols=75 Identities=9% Similarity=0.081 Sum_probs=57.6
Q ss_pred ccccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhc--CccccCEEEEec
Q 001096 1008 LQDHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKV--GAERACAAAITL 1081 (1158)
Q Consensus 1008 l~~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~A--gI~~A~~VIi~t 1081 (1158)
..++++|.|. +-+|+.+++.|.++|..|++++++++..+.+.+ ..+.++.+|.++++.++++ ...+.|++|-..
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~A 92 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNA 92 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence 3456778875 568999999999999999999999988766533 3677888999999887654 234677777554
Q ss_pred C
Q 001096 1082 D 1082 (1158)
Q Consensus 1082 ~ 1082 (1158)
+
T Consensus 93 g 93 (249)
T 3f9i_A 93 G 93 (249)
T ss_dssp C
T ss_pred C
Confidence 3
No 171
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=87.25 E-value=1.3 Score=48.99 Aligned_cols=72 Identities=13% Similarity=0.112 Sum_probs=54.8
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh-hh-CCCCEEEccCCCHHHHHhcCcc--ccCEEEEecC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG-RA-LDLPVYFGDAGSREVLHKVGAE--RACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l-~~-~g~~vi~GDasd~e~L~~AgI~--~A~~VIi~t~ 1082 (1158)
..++|.|. |-+|..+++.|.+.|++|+++++++...... .. .++.++.||.+|++.++++ ++ +.|+||-+..
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~-~~~~~~D~vih~A~ 97 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERA-FDSFKPTHVVHSAA 97 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHH-HHHHCCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHH-HhhcCCCEEEECCc
Confidence 35888886 8999999999999999999999865432111 11 3677899999999988765 23 6888887664
No 172
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=87.24 E-value=0.46 Score=55.31 Aligned_cols=110 Identities=13% Similarity=0.076 Sum_probs=76.6
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
.+.++|+|.|..|+.+++.+++.|++|+++|.+++..... .....+.+|..|.+.+.++- +++|+|+...++ .+.
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~--~ad~~~~~~~~d~~~l~~~a-~~~D~V~~~~e~--~~~ 109 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGA--VADRHLRAAYDDEAALAELA-GLCEAVSTEFEN--VPA 109 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHH--HSSEEECCCTTCHHHHHHHH-HHCSEEEECCTT--CCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhh--hCCEEEECCcCCHHHHHHHH-hcCCEEEEccCc--CCH
Confidence 4568999999999999999999999999999887654322 12357789999999887765 678887754443 333
Q ss_pred HHHHHHHh---hCCCceEEEEecChh-hHHHHHHCCCCe
Q 001096 1089 RTVWALSK---YFPNVKTFVRAHDID-HGLNLEKAGATA 1123 (1158)
Q Consensus 1089 ~i~l~ar~---l~p~~~IIara~d~e-~~~~L~~aGAd~ 1123 (1158)
.+...+.+ ..|+...+..+.|.. ....++++|+..
T Consensus 110 ~~~~~l~~~~~vgp~~~a~~~~~dK~~~k~~l~~~Gip~ 148 (419)
T 4e4t_A 110 ASLDFLARTTFVAPAGRCVAVAQDRIAEKRFIEASGVPV 148 (419)
T ss_dssp HHHHHHHTTSEESSCHHHHHHHTCHHHHHHHHHHTTCCB
T ss_pred HHHHHHHccCCcCCCHHHHHHhcCHHHHHHHHHHcCcCC
Confidence 33333333 245555555566654 445667888763
No 173
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=87.12 E-value=3.9 Score=38.23 Aligned_cols=102 Identities=7% Similarity=0.029 Sum_probs=62.9
Q ss_pred CCCEEEEeCCchHHHHh----hh-CCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHh--hCCCceE
Q 001096 1032 LIPFVALDVRSDRVAIG----RA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSK--YFPNVKT 1103 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l----~~-~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~--l~p~~~I 1103 (1158)
...|.++|.|+.....+ .. .|+.++.--.+-.+.+..+.-...+.+++-..-+. .-+.++..+|+ .+|.++|
T Consensus 8 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~i 87 (143)
T 3cnb_A 8 DFSILIIEDDKEFADMLTQFLENLFPYAKIKIAYNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIV 87 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEECSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEE
T ss_pred CceEEEEECCHHHHHHHHHHHHhccCccEEEEECCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcE
Confidence 45677777776654322 34 56662222222234444444456788888776543 34567888888 6788898
Q ss_pred EEEecChh--hHHHHHHCCCCeeecCCcHHHH
Q 001096 1104 FVRAHDID--HGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1104 Iara~d~e--~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
|+.+...+ ......++|++.++........
T Consensus 88 i~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~ 119 (143)
T 3cnb_A 88 IAMTGALTDDNVSRIVALGAETCFGKPLNFTL 119 (143)
T ss_dssp EEEESSCCHHHHHHHHHTTCSEEEESSCCHHH
T ss_pred EEEeCCCCHHHHHHHHhcCCcEEEeCCCCHHH
Confidence 88876544 4466778999988876655444
No 174
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=87.09 E-value=0.67 Score=51.99 Aligned_cols=72 Identities=14% Similarity=0.223 Sum_probs=59.0
Q ss_pred ccccccC-CcccHHHHHHHHhhC-CCCEEEEeCCchHHHHhhh-CCCCEEEccCC-CHHHHHhcCccccCEEEEecC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSER-LIPFVALDVRSDRVAIGRA-LDLPVYFGDAG-SREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~-g~~VvVID~d~~~v~~l~~-~g~~vi~GDas-d~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
..++|.| .|-+|..+++.|.+. |++|++++++++....+.. .++.++.||.+ |++.+.++ ++++|+||-+..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~-~~~~d~Vih~A~ 100 (372)
T 3slg_A 25 KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYH-VKKCDVILPLVA 100 (372)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHH-HHHCSEEEECBC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHH-hccCCEEEEcCc
Confidence 4688898 599999999999998 9999999999887665543 68999999999 99888764 247889886443
No 175
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=87.04 E-value=1.9 Score=47.47 Aligned_cols=72 Identities=14% Similarity=0.219 Sum_probs=53.9
Q ss_pred cccccC-CcccHHHHHHHHhhCCCCEEEEeCCc--h---HHHHhhhC-CCCEEEccCCCHHHHHhcCcc--ccCEEEEec
Q 001096 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRS--D---RVAIGRAL-DLPVYFGDAGSREVLHKVGAE--RACAAAITL 1081 (1158)
Q Consensus 1011 hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~--~---~v~~l~~~-g~~vi~GDasd~e~L~~AgI~--~A~~VIi~t 1081 (1158)
.++|.| .|-+|..+++.|.+.|++|++++++. . ....+... ++.++.||.+|++.++++ ++ +.|+||-+.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d~vih~A 81 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRL-ITKYMPDSCFHLA 81 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHH-HHHHCCSEEEECC
T ss_pred EEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHH-HhccCCCEEEECC
Confidence 477888 58999999999999999999998642 1 22333333 478899999999988765 23 388888776
Q ss_pred CC
Q 001096 1082 DT 1083 (1158)
Q Consensus 1082 ~d 1083 (1158)
..
T Consensus 82 ~~ 83 (347)
T 1orr_A 82 GQ 83 (347)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 176
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=87.01 E-value=4.7 Score=38.89 Aligned_cols=102 Identities=10% Similarity=0.036 Sum_probs=67.2
Q ss_pred CCCCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh-hHHHHHHHHhhC--CCceE
Q 001096 1031 RLIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-NYRTVWALSKYF--PNVKT 1103 (1158)
Q Consensus 1031 ~g~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~-Nl~i~l~ar~l~--p~~~I 1103 (1158)
....|.++|.|+...+.+ .+.|+.+...+ +-.+.++.+.-...++|++-..-+.. -+.++..+|+.. |+++|
T Consensus 6 ~~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pi 84 (154)
T 3gt7_A 6 RAGEILIVEDSPTQAEHLKHILEETGYQTEHVR-NGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPV 84 (154)
T ss_dssp -CCEEEEECSCHHHHHHHHHHHHTTTCEEEEES-SHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCE
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCCEEEEeC-CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCE
Confidence 456788888887655433 44577664432 33556666666678898887765543 356777788763 77888
Q ss_pred EEEec--ChhhHHHHHHCCCCeeecCCcHHHH
Q 001096 1104 FVRAH--DIDHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1104 Iara~--d~e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
|+.+. +.+......++|++.++........
T Consensus 85 i~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~ 116 (154)
T 3gt7_A 85 ILLTILSDPRDVVRSLECGADDFITKPCKDVV 116 (154)
T ss_dssp EEEECCCSHHHHHHHHHHCCSEEEESSCCHHH
T ss_pred EEEECCCChHHHHHHHHCCCCEEEeCCCCHHH
Confidence 87774 4556677788999988876655444
No 177
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=86.94 E-value=0.42 Score=53.98 Aligned_cols=110 Identities=16% Similarity=0.076 Sum_probs=68.1
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCC-CHHHHHhcCccccCEEEEecCCchhhHH
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAG-SREVLHKVGAERACAAAITLDTPGANYR 1089 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDas-d~e~L~~AgI~~A~~VIi~t~dd~~Nl~ 1089 (1158)
.++|+|.|..|..++...++.|++++++|.|++... .+.-..+++-|.. +.+.+... .+++|+|+...++...+-.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~--~~~aD~~~~~~~~~d~~~~~~~-~~~~D~v~~~~~~~~~~~~ 79 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQALI--RNYADEFYCFDVIKEPEKLLEL-SKRVDAVLPVNENLACIEF 79 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTT--TTTSSEEEECCTTTCHHHHHHH-HTSSSEEEECCCCHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCChh--HhhCCEEEECCCCcCHHHHHHH-hcCCCEEEECCCChhHHHH
Confidence 578999999999999999999999999999987542 1222345555544 44444332 3478888777766544433
Q ss_pred HHHHHHhh----CCCceEEEEecCh-hhHHHHHHCCCCe
Q 001096 1090 TVWALSKY----FPNVKTFVRAHDI-DHGLNLEKAGATA 1123 (1158)
Q Consensus 1090 i~l~ar~l----~p~~~IIara~d~-e~~~~L~~aGAd~ 1123 (1158)
......+. .|+...+..+.|. ...+.++++|+..
T Consensus 80 ~~~~~~~~~~~~g~~~~a~~~~~dK~~~k~~l~~~gip~ 118 (363)
T 4ffl_A 80 LNSIKEKFSCPVLFDFEAYRISRDKKKSKDYFKSIGVPT 118 (363)
T ss_dssp HHHHGGGCSSCBCCCHHHHHHHTSHHHHHHHHHHTTCCC
T ss_pred HHHHHHHCCCccCCCHHHHHHhhCHHHHHHHHHhcCCCC
Confidence 33323322 2333334444444 3455667777653
No 178
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=86.91 E-value=0.74 Score=48.87 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=56.0
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC-CCCEEEccCCCHHHHHhc--CccccCEEEEec
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKV--GAERACAAAITL 1081 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~-g~~vi~GDasd~e~L~~A--gI~~A~~VIi~t 1081 (1158)
+.++|.|. +.+|+.+++.|.++|.+|+++++++++.+.+.+. +..++.+|.+|++.++++ ...+.|++|-..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~A 82 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVA 82 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECC
Confidence 45777775 6799999999999999999999998877655432 567788999999988754 234678887554
No 179
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.88 E-value=0.45 Score=55.74 Aligned_cols=66 Identities=11% Similarity=0.131 Sum_probs=50.5
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
.+.++|+|+|++|+.+++.|+..|.+|++.|.|+.+...+...|+.+. + +++ -+.++|.++.++++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~-----~---Lee-al~~ADIVi~atgt 285 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLV-----K---LNE-VIRQVDIVITCTGN 285 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-----C---HHH-HTTTCSEEEECSSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEec-----c---HHH-HHhcCCEEEECCCC
Confidence 357899999999999999999999999999999987766666676442 2 222 13478888886554
No 180
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.87 E-value=0.97 Score=46.75 Aligned_cols=69 Identities=20% Similarity=0.132 Sum_probs=50.0
Q ss_pred cccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC-C-----CCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-D-----LPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1011 hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~-g-----~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
++.|+| .|.+|..+++.|.+.|++|+++|+++++.+.+.+. + ..+.. .+. .++ ++++|.|+.++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~-~~~~D~Vi~~~~~ 74 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITG---MKN---EDA-AEACDIAVLTIPW 74 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEE---EEH---HHH-HHHCSEEEECSCH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCCh---hhH---HHH-HhcCCEEEEeCCh
Confidence 367899 99999999999999999999999999887766432 2 11221 122 111 3468999999986
Q ss_pred chh
Q 001096 1084 PGA 1086 (1158)
Q Consensus 1084 d~~ 1086 (1158)
+..
T Consensus 75 ~~~ 77 (212)
T 1jay_A 75 EHA 77 (212)
T ss_dssp HHH
T ss_pred hhH
Confidence 643
No 181
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=86.86 E-value=6.3 Score=37.71 Aligned_cols=101 Identities=10% Similarity=0.082 Sum_probs=64.6
Q ss_pred CCCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEE
Q 001096 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIar 1106 (1158)
+..|.+||.|+.....+ ...|+.+... .+-.+.+..+.-...+.|++-..-+. ..+.++..+|+.+|.++||+.
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~l 85 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIKRLGCNIITF-TSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVI 85 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCEEEEE-SCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHcCCeEEEe-CCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEE
Confidence 45677777776654433 3456665532 22345556655566888888765543 346778889999999999888
Q ss_pred ecChh--hHHHHHHCC-CCeeecCCcHHHH
Q 001096 1107 AHDID--HGLNLEKAG-ATAVVPETLEPSL 1133 (1158)
Q Consensus 1107 a~d~e--~~~~L~~aG-Ad~VI~p~~~a~~ 1133 (1158)
+...+ ......+.| ++.++........
T Consensus 86 s~~~~~~~~~~~~~~g~~~~~l~kP~~~~~ 115 (154)
T 2rjn_A 86 SGYADAQATIDAVNRGKISRFLLKPWEDED 115 (154)
T ss_dssp ECGGGHHHHHHHHHTTCCSEEEESSCCHHH
T ss_pred ecCCCHHHHHHHHhccchheeeeCCCCHHH
Confidence 77654 445555677 8877665544443
No 182
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=86.73 E-value=0.72 Score=50.06 Aligned_cols=70 Identities=20% Similarity=0.130 Sum_probs=54.4
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCC--CCEEEccCCCHHHHHhc------CccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALD--LPVYFGDAGSREVLHKV------GAERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g--~~vi~GDasd~e~L~~A------gI~~A~~VIi 1079 (1158)
+.+||.|. +.+|+.+++.|.+.|.+|+++|.|++..+...+.+ ...+.+|.+|++..+++ ...+.|.+|-
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN 81 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN 81 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45777775 45999999999999999999999999887776554 45678999999876543 2236777664
No 183
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=86.71 E-value=3.1 Score=39.20 Aligned_cols=102 Identities=9% Similarity=0.043 Sum_probs=65.7
Q ss_pred CCCCEEEEeCCchHHHHh----hhC-CCCEEEccCCC-HHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceE
Q 001096 1031 RLIPFVALDVRSDRVAIG----RAL-DLPVYFGDAGS-REVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKT 1103 (1158)
Q Consensus 1031 ~g~~VvVID~d~~~v~~l----~~~-g~~vi~GDasd-~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~I 1103 (1158)
....|.++|.|+...+.+ .+. |+.++ +...+ .+.++.+.-...+.+++-..-+. ..+.++..+|+..+..+|
T Consensus 8 ~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v-~~~~~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 86 (143)
T 2qv0_A 8 EKMKVIIVEDEFLAQQELSWLINTHSQMEIV-GSFDDGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFI 86 (143)
T ss_dssp --CEEEEECSCHHHHHHHHHHHHHHSCCEEE-EEESCHHHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEE
T ss_pred CceEEEEEcCCHHHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceE
Confidence 346788888887765433 232 55543 22333 34444444456788887765543 346678888888888888
Q ss_pred EEEecChhhHHHHHHCCCCeeecCCcHHHH
Q 001096 1104 FVRAHDIDHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1104 Iara~d~e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
|+.+...+......+.|++.++........
T Consensus 87 i~~s~~~~~~~~~~~~g~~~~l~KP~~~~~ 116 (143)
T 2qv0_A 87 VFITAWKEHAVEAFELEAFDYILKPYQESR 116 (143)
T ss_dssp EEEESCCTTHHHHHHTTCSEEEESSCCHHH
T ss_pred EEEeCCHHHHHHHHhCCcceEEeCCCCHHH
Confidence 887777777778889999988776555444
No 184
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=86.69 E-value=0.61 Score=53.31 Aligned_cols=110 Identities=15% Similarity=0.147 Sum_probs=74.1
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
.+.++|+|.|..|+.+++.+++.|++|+++|.+++.. ....-...+.+|..|.+.+.+.- +++|++.... +..+.
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~--~~~~ad~~~~~~~~d~~~l~~~~-~~~dvI~~~~--e~~~~ 88 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSP--CAQVADIEIVASYDDLKAIQHLA-EISDVVTYEF--ENIDY 88 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCT--TTTTCSEEEECCTTCHHHHHHHH-HTCSEEEESC--CCCCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc--hHHhCCceEecCcCCHHHHHHHH-HhCCEeeecc--ccccH
Confidence 3578999999999999999999999999999887532 12222346778999988877664 4577763333 33344
Q ss_pred HHHHHHHhh---CCCceEEEEecChh-hHHHHHHCCCCe
Q 001096 1089 RTVWALSKY---FPNVKTFVRAHDID-HGLNLEKAGATA 1123 (1158)
Q Consensus 1089 ~i~l~ar~l---~p~~~IIara~d~e-~~~~L~~aGAd~ 1123 (1158)
.....+.+. .|+...+..+.|.. ....++++|+..
T Consensus 89 ~~~~~l~~~g~~~~~~~~~~~~~dK~~~k~~l~~~Gip~ 127 (389)
T 3q2o_A 89 RCLQWLEKHAYLPQGSQLLSKTQNRFTEKNAIEKAGLPV 127 (389)
T ss_dssp HHHHHHHHHSCCTTCSHHHHHTTSHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhhCccCCCHHHHHHhcCHHHHHHHHHHCCCCC
Confidence 444444433 45556666666665 444677888653
No 185
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=86.62 E-value=1.2 Score=48.53 Aligned_cols=70 Identities=14% Similarity=0.126 Sum_probs=54.0
Q ss_pred cccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCc-cccCEEEEecC
Q 001096 1009 QDHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGA-ERACAAAITLD 1082 (1158)
Q Consensus 1009 ~~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI-~~A~~VIi~t~ 1082 (1158)
..+++|.| .|-+|..+++.|.+.|++|++++++++. .. .++.++.||.+|++.++++=- .+.|+||-+..
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 83 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAA 83 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 45577776 5889999999999999999999988765 22 267888999999998876521 24788887654
No 186
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=86.60 E-value=2.2 Score=39.92 Aligned_cols=102 Identities=10% Similarity=0.026 Sum_probs=66.5
Q ss_pred CCCCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEE
Q 001096 1031 RLIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFV 1105 (1158)
Q Consensus 1031 ~g~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIa 1105 (1158)
....|+++|.|+...+.+ .+.|+.+..-. +-.+.++.+.-...+.|++-..-+. .-+.++..+|+.+|.++||+
T Consensus 6 ~~~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~-~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 84 (137)
T 3hdg_A 6 VALKILIVEDDTDAREWLSTIISNHFPEVWSAG-DGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIV 84 (137)
T ss_dssp -CCCEEEECSCHHHHHHHHHHHHTTCSCEEEES-SHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEE
T ss_pred cccEEEEEeCCHHHHHHHHHHHHhcCcEEEEEC-CHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEE
Confidence 346788888877655433 34455554322 2234444444456788877766443 44677888999999999988
Q ss_pred EecChh--hHHHHHHCCCCeeecCCcHHHH
Q 001096 1106 RAHDID--HGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1106 ra~d~e--~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.+...+ ......++|++.++........
T Consensus 85 ~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~ 114 (137)
T 3hdg_A 85 ISAFSEMKYFIKAIELGVHLFLPKPIEPGR 114 (137)
T ss_dssp CCCCCCHHHHHHHHHHCCSEECCSSCCHHH
T ss_pred EecCcChHHHHHHHhCCcceeEcCCCCHHH
Confidence 877554 6667788999998876655544
No 187
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=86.58 E-value=4.6 Score=38.01 Aligned_cols=100 Identities=13% Similarity=0.094 Sum_probs=64.1
Q ss_pred CCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcC--ccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEE
Q 001096 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVG--AERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFV 1105 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~Ag--I~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIa 1105 (1158)
..|.++|.|+...+.+ ...|+.+.... +..+.+..+. -...+.|++-..-+. .-+.++..+|+.+|+++||+
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~-~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 82 (143)
T 3jte_A 4 AKILVIDDESTILQNIKFLLEIDGNEVLTAS-SSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVII 82 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEE
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCceEEEeC-CHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEE
Confidence 3567777776654432 34566555332 2233444333 346788888776543 34677888999999999988
Q ss_pred EecChh--hHHHHHHCCCCeeecCCcHHHH
Q 001096 1106 RAHDID--HGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1106 ra~d~e--~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.+...+ ......++|++.++........
T Consensus 83 ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~ 112 (143)
T 3jte_A 83 LTGHGDLDNAILAMKEGAFEYLRKPVTAQD 112 (143)
T ss_dssp EECTTCHHHHHHHHHTTCSEEEESSCCHHH
T ss_pred EECCCCHHHHHHHHHhCcceeEeCCCCHHH
Confidence 887654 4667788999987776655444
No 188
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=86.47 E-value=0.43 Score=53.21 Aligned_cols=69 Identities=13% Similarity=0.104 Sum_probs=51.0
Q ss_pred cccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC-------CCCEEEccCCCHHHHHhcCccccCEEEE
Q 001096 1007 DLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-------DLPVYFGDAGSREVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1007 ~l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~-------g~~vi~GDasd~e~L~~AgI~~A~~VIi 1079 (1158)
+..+++-++|.|.+|..++..|. .|++|+++|.+++..+.+.+. +.. ...|+ . .+.+||.||.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~-~~~~~------~--~~~~aDlVie 79 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIE-FTTTL------E--KVKDCDIVME 79 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEE-EESSC------T--TGGGCSEEEE
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeE-EeCCH------H--HHcCCCEEEE
Confidence 44677999999999999999999 999999999999998877654 211 11121 1 1567788877
Q ss_pred ecCCch
Q 001096 1080 TLDTPG 1085 (1158)
Q Consensus 1080 ~t~dd~ 1085 (1158)
++.++.
T Consensus 80 avpe~~ 85 (293)
T 1zej_A 80 AVFEDL 85 (293)
T ss_dssp CCCSCH
T ss_pred cCcCCH
Confidence 777764
No 189
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=86.45 E-value=1.3 Score=49.77 Aligned_cols=76 Identities=20% Similarity=0.096 Sum_probs=57.1
Q ss_pred ccccccCCcccHHH-HHHHHhhCCCCEEEEeCCc--hHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1010 DHIILCGFGRVGQI-IAQLLSERLIPFVALDVRS--DRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~-Ia~~L~e~g~~VvVID~d~--~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
+++.++|.|..|.. +++.|.++|++|.+.|.++ ...+.+++.|.+++.|. +++.+.. .++|.||....=+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~--~~~~l~~---~~~d~vV~Spgi~~~ 79 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGF--DAAQLDE---FKADVYVIGNVAKRG 79 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESC--CGGGGGS---CCCSEEEECTTCCTT
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCC--CHHHcCC---CCCCEEEECCCcCCC
Confidence 57899999999996 9999999999999999875 35677888999999883 3332211 368888877655544
Q ss_pred hHHH
Q 001096 1087 NYRT 1090 (1158)
Q Consensus 1087 Nl~i 1090 (1158)
|-.+
T Consensus 80 ~p~~ 83 (326)
T 3eag_A 80 MDVV 83 (326)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 4443
No 190
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=86.43 E-value=0.54 Score=54.69 Aligned_cols=100 Identities=15% Similarity=0.040 Sum_probs=70.7
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccC----------------CC------HHHH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDA----------------GS------REVL 1066 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDa----------------sd------~e~L 1066 (1158)
...++|+|.|.+|..+++.+...|.+|+++|.++++.+.+.+.|.+++.-+. ++ .+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l 269 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV 269 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence 4579999999999999999999999999999999998888887766443211 11 2244
Q ss_pred HhcCccccCEEEEecCCc---hhhHHHHHHHHhhCCCceEEEEecC
Q 001096 1067 HKVGAERACAAAITLDTP---GANYRTVWALSKYFPNVKTFVRAHD 1109 (1158)
Q Consensus 1067 ~~AgI~~A~~VIi~t~dd---~~Nl~i~l~ar~l~p~~~IIara~d 1109 (1158)
.++ +.+||.||.+.-.+ ...+..-..++...|...||-.+-|
T Consensus 270 ~e~-l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d 314 (405)
T 4dio_A 270 AEH-IAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVE 314 (405)
T ss_dssp HHH-HHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGG
T ss_pred HHH-hcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCC
Confidence 433 56899998775332 2333445667777777666655543
No 191
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=86.43 E-value=1.3 Score=51.82 Aligned_cols=76 Identities=17% Similarity=0.170 Sum_probs=59.2
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCc----hHHHHhhhCCCCEEEccCCCHHHHHhcCccc-cCEEEEecCC
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRS----DRVAIGRALDLPVYFGDAGSREVLHKVGAER-ACAAAITLDT 1083 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~----~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~-A~~VIi~t~d 1083 (1158)
.+++.++|.|..|..+++.|.++|++|.+.|.++ ...+.+++.|+++..|...+ +. +++ +|.||+...-
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~-~~-----~~~~~d~vv~spgi 82 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPL-EL-----LDEDFCYMIKNPGI 82 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCG-GG-----GGSCEEEEEECTTS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChH-Hh-----hcCCCCEEEECCcC
Confidence 3689999999999999999999999999999864 34567888999999986533 11 234 8888887766
Q ss_pred chhhHHH
Q 001096 1084 PGANYRT 1090 (1158)
Q Consensus 1084 d~~Nl~i 1090 (1158)
+..|-.+
T Consensus 83 ~~~~p~~ 89 (451)
T 3lk7_A 83 PYNNPMV 89 (451)
T ss_dssp CTTSHHH
T ss_pred CCCChhH
Confidence 6555443
No 192
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=86.38 E-value=5.6 Score=36.61 Aligned_cols=101 Identities=14% Similarity=0.078 Sum_probs=66.6
Q ss_pred CCCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEE
Q 001096 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIar 1106 (1158)
+..+.++|.|+...+.+ ...|+.+... .+..+.+....-...+.+++-..-+. .-+.++..+|+.+|+++|++.
T Consensus 3 ~~~ilivdd~~~~~~~l~~~l~~~~~~v~~~-~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~ 81 (126)
T 1dbw_A 3 DYTVHIVDDEEPVRKSLAFMLTMNGFAVKMH-QSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVI 81 (126)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHTTCEEEEE-SCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEE
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCCcEEEEe-CCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEE
Confidence 34688888887655433 4457766543 23355566655556778777665543 335677788888888888887
Q ss_pred ecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1107 AHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1107 a~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+... +......++|++..+........
T Consensus 82 s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~ 110 (126)
T 1dbw_A 82 TGHGDVPMAVEAMKAGAVDFIEKPFEDTV 110 (126)
T ss_dssp ECTTCHHHHHHHHHTTCSEEEESSCCHHH
T ss_pred ECCCCHHHHHHHHHhCHHHheeCCCCHHH
Confidence 7654 45667788999988776655544
No 193
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=86.26 E-value=0.68 Score=50.16 Aligned_cols=74 Identities=18% Similarity=0.161 Sum_probs=58.0
Q ss_pred cccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCc------cccCEEEEec
Q 001096 1009 QDHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGA------ERACAAAITL 1081 (1158)
Q Consensus 1009 ~~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI------~~A~~VIi~t 1081 (1158)
.+.++|.|. +-+|+.+++.|.+.|..|++++++.+..+.....+..++.+|.+|++.++++-- .+.|++|-..
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnA 95 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNA 95 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECC
Confidence 345777775 669999999999999999999999998887766678888999999987765411 2567776554
Q ss_pred C
Q 001096 1082 D 1082 (1158)
Q Consensus 1082 ~ 1082 (1158)
+
T Consensus 96 g 96 (266)
T 3p19_A 96 G 96 (266)
T ss_dssp C
T ss_pred C
Confidence 3
No 194
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=86.25 E-value=0.5 Score=51.95 Aligned_cols=72 Identities=21% Similarity=0.241 Sum_probs=53.7
Q ss_pred cccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCc-cccCEEEEecC
Q 001096 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGA-ERACAAAITLD 1082 (1158)
Q Consensus 1011 hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI-~~A~~VIi~t~ 1082 (1158)
.++|.| .|-+|..+++.|.+.|++|+++++++.........++.++.||.+|++.++++=- .+.|+||-+..
T Consensus 3 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~ 76 (330)
T 2c20_A 3 SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAA 76 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCc
Confidence 467787 5999999999999999999999986543211111268899999999998876521 16788877654
No 195
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.15 E-value=0.55 Score=53.96 Aligned_cols=97 Identities=18% Similarity=0.115 Sum_probs=65.7
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-CCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh-
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA- 1086 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~- 1086 (1158)
...++|+|.|.+|..+++.+...|.+|+++|.++++.+.+.+ .|..+.. +..+.+.+.++ +.++|.||.++..+..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~-~~~~~~~l~~~-l~~aDvVi~~~~~p~~~ 245 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHT-RYSSAYELEGA-VKRADLVIGAVLVPGAK 245 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEE-EECCHHHHHHH-HHHCSEEEECCCCTTSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEe-ccCCHHHHHHH-HcCCCEEEECCCcCCCC
Confidence 457999999999999999999999999999999998877755 4554322 22234444332 3579999998765532
Q ss_pred --hHHHHHHHHhhCCCceEEEEe
Q 001096 1087 --NYRTVWALSKYFPNVKTFVRA 1107 (1158)
Q Consensus 1087 --Nl~i~l~ar~l~p~~~IIara 1107 (1158)
.+.....++...|...++-..
T Consensus 246 t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 246 APKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CcceecHHHHhcCCCCcEEEEEe
Confidence 222233445556665555554
No 196
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=86.11 E-value=3.4 Score=38.64 Aligned_cols=100 Identities=8% Similarity=0.023 Sum_probs=61.5
Q ss_pred CCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC------chhhHHHHHHHHhhCCCce
Q 001096 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDT------PGANYRTVWALSKYFPNVK 1102 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d------d~~Nl~i~l~ar~l~p~~~ 1102 (1158)
..|.++|.|+...+.+ .+.|+.+..-+ +-.+.+..+.-...+.+++-..- +...+.++..+|+.+|.++
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 82 (140)
T 2qr3_A 4 GTIIIVDDNKGVLTAVQLLLKNHFSKVITLS-SPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLP 82 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTSSEEEEEC-CHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCcEEEEeC-CHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCC
Confidence 4566777666544322 34456554321 22334444433457777776654 3345677888898899999
Q ss_pred EEEEecChh--hHHHHHHCCCCeeecCCcHHHH
Q 001096 1103 TFVRAHDID--HGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1103 IIara~d~e--~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
||+.+...+ ......++|++.++........
T Consensus 83 ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~ 115 (140)
T 2qr3_A 83 VVLFTAYADIDLAVRGIKEGASDFVVKPWDNQK 115 (140)
T ss_dssp EEEEEEGGGHHHHHHHHHTTCCEEEEESCCHHH
T ss_pred EEEEECCCCHHHHHHHHHcCchheeeCCCCHHH
Confidence 888876544 5667778999888766555444
No 197
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=86.06 E-value=0.62 Score=51.60 Aligned_cols=72 Identities=19% Similarity=0.220 Sum_probs=55.5
Q ss_pred cccccC-CcccHHHHHHHHhhC--CCCEEEEeCCch-----HHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecC
Q 001096 1011 HIILCG-FGRVGQIIAQLLSER--LIPFVALDVRSD-----RVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1011 hvVIiG-~G~vG~~Ia~~L~e~--g~~VvVID~d~~-----~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
.++|.| .|-+|..+++.|.+. |++|+++++++. ....+...++.++.||.+|++.++++ ++++|+||-+..
T Consensus 6 ~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vih~A~ 84 (348)
T 1oc2_A 6 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKL-AAKADAIVHYAA 84 (348)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHH-HTTCSEEEECCS
T ss_pred EEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHH-hhcCCEEEECCc
Confidence 578888 589999999999998 899999998642 22222234678899999999998876 456788887765
Q ss_pred C
Q 001096 1083 T 1083 (1158)
Q Consensus 1083 d 1083 (1158)
.
T Consensus 85 ~ 85 (348)
T 1oc2_A 85 E 85 (348)
T ss_dssp C
T ss_pred c
Confidence 3
No 198
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=86.03 E-value=0.88 Score=48.40 Aligned_cols=73 Identities=11% Similarity=0.104 Sum_probs=56.0
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-CCCCEEEccCCCHHHHHhcC------ccccCEEEEec
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVG------AERACAAAITL 1081 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi~t 1081 (1158)
+.++|.|. +.+|+.+++.|.++|++|++++++++..+...+ .|..++.+|.+|++.++++= ..+.|.+|-..
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~A 85 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYA 85 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 45777775 679999999999999999999999887765543 36788899999998876531 12467777654
Q ss_pred C
Q 001096 1082 D 1082 (1158)
Q Consensus 1082 ~ 1082 (1158)
+
T Consensus 86 g 86 (245)
T 1uls_A 86 G 86 (245)
T ss_dssp C
T ss_pred C
Confidence 3
No 199
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=86.02 E-value=6.6 Score=37.63 Aligned_cols=100 Identities=13% Similarity=0.086 Sum_probs=66.7
Q ss_pred CCEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEEe
Q 001096 1033 IPFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRA 1107 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIara 1107 (1158)
..|.++|.|+..... +...|+.+... .+-.+.+..+.-...+.+++-..-+. .-+.++..+|+.+|+++||+.+
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls 82 (155)
T 1qkk_A 4 PSVFLIDDDRDLRKAMQQTLELAGFTVSSF-ASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVT 82 (155)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEE-SCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCcEEEEE-CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 457777777665432 34457765532 23355566666667888888776543 3466788888889999988887
Q ss_pred cCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1108 HDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1108 ~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
... +......++|++.++........
T Consensus 83 ~~~~~~~~~~~~~~g~~~~l~kP~~~~~ 110 (155)
T 1qkk_A 83 GHGDIPMAVQAIQDGAYDFIAKPFAADR 110 (155)
T ss_dssp CGGGHHHHHHHHHTTCCEEEESSCCHHH
T ss_pred CCCChHHHHHHHhcCCCeEEeCCCCHHH
Confidence 654 45666778999998876655444
No 200
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=85.97 E-value=0.62 Score=50.63 Aligned_cols=72 Identities=15% Similarity=0.144 Sum_probs=55.6
Q ss_pred ccccccCC-cccHHHHHHHHhhC--CCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCc-cccCEEEEecCC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGA-ERACAAAITLDT 1083 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~--g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI-~~A~~VIi~t~d 1083 (1158)
.+++|.|. |-+|..+++.|.+. |++|+++++++.... . ..+..++.||.+|++.++++=- .+.|+||-+...
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~-~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~ 78 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V-VNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAAL 78 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H-HHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCC
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c-cCCCceEEecCCCHHHHHHHHhhcCCCEEEECCcc
Confidence 45788887 89999999999998 899999998766532 1 1367899999999998876521 167888877543
No 201
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=85.87 E-value=3.1 Score=39.16 Aligned_cols=59 Identities=27% Similarity=0.310 Sum_probs=42.9
Q ss_pred HHHhhhHHHHHHHHHhhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-------HHhhhHHHHHHH
Q 001096 271 LAAENDIKECQANLANCETELRRLQSKKEELQKEVDRLNEVAEKAQM-------NALKAEEDVANI 329 (1158)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q~~~~~~~~~~~~~~~-------~~~~a~~~~~~~ 329 (1158)
..++.+.++.+......|.|+..||.|..-++.++++.++....|+- .+.+||.+|++.
T Consensus 26 e~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L 91 (101)
T 3u1c_A 26 EQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASL 91 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777777777888889999999988888888887766665554 455566666653
No 202
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=85.83 E-value=2.5 Score=47.58 Aligned_cols=92 Identities=21% Similarity=0.234 Sum_probs=65.3
Q ss_pred ccccccCCcccHHHHHHHHhhCCC-CEEEEeCCchHHH----HhhhC------CCCEE-EccCCCHHHHHhcCccccCEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVA----IGRAL------DLPVY-FGDAGSREVLHKVGAERACAA 1077 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~~~v~----~l~~~------g~~vi-~GDasd~e~L~~AgI~~A~~V 1077 (1158)
.++.|+|.|.+|..++..|...+. +++++|.++++.+ .+.+. ...+. .+| ...+++||.|
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d--------~~a~~~aDvV 77 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND--------YKDLENSDVV 77 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC--------GGGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC--------HHHHCCCCEE
Confidence 468899999999999999998888 9999999998764 22221 23343 232 1346789999
Q ss_pred EEecCCc-----------hhhHH----HHHHHHhhCCCceEEEEecC
Q 001096 1078 AITLDTP-----------GANYR----TVWALSKYFPNVKTFVRAHD 1109 (1158)
Q Consensus 1078 Ii~t~dd-----------~~Nl~----i~l~ar~l~p~~~IIara~d 1109 (1158)
|++.+.+ ..|.. ++..+++..|+..+++..|=
T Consensus 78 Ii~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNP 124 (321)
T 3p7m_A 78 IVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNP 124 (321)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred EEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 9987554 23543 44567788899887777653
No 203
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=85.81 E-value=0.3 Score=54.06 Aligned_cols=72 Identities=13% Similarity=0.051 Sum_probs=53.0
Q ss_pred cccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHH------HHhh-hCCCCEEEccCCCHHHHHhcCccccCEEEEe
Q 001096 1009 QDHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRV------AIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAIT 1080 (1158)
Q Consensus 1009 ~~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v------~~l~-~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~ 1080 (1158)
.+.++|.| .|-+|..+++.|.++|++|+++.++++.. ..+. ..++.++.||.+|++.+.++ ++++|+||-+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~Vih~ 87 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAP-IAGCDFVFHV 87 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHH-HTTCSEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHH-HcCCCEEEEe
Confidence 35688998 68999999999999999999887776532 1221 23567889999998776654 3457887754
Q ss_pred c
Q 001096 1081 L 1081 (1158)
Q Consensus 1081 t 1081 (1158)
.
T Consensus 88 A 88 (338)
T 2rh8_A 88 A 88 (338)
T ss_dssp S
T ss_pred C
Confidence 3
No 204
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=85.80 E-value=1.9 Score=48.72 Aligned_cols=92 Identities=23% Similarity=0.173 Sum_probs=64.3
Q ss_pred cccccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHH----HhhhC-----CCCEEEccCCCHHHHHhcCccccCEE
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVA----IGRAL-----DLPVYFGDAGSREVLHKVGAERACAA 1077 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~----~l~~~-----g~~vi~GDasd~e~L~~AgI~~A~~V 1077 (1158)
..++.|+|.|.+|..++..|...+. +++++|.++++.+ .+.+. +..+..+| ...+++||+|
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~--------~~a~~~aDiV 80 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE--------YSDAKDADLV 80 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC--------GGGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc--------HHHhcCCCEE
Confidence 4578999999999999999988877 8999999988765 22221 23333333 2347789999
Q ss_pred EEecCCc-----------hhhH----HHHHHHHhhCCCceEEEEec
Q 001096 1078 AITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAH 1108 (1158)
Q Consensus 1078 Ii~t~dd-----------~~Nl----~i~l~ar~l~p~~~IIara~ 1108 (1158)
|++.+.+ ..|. .++..+.+..|+..+++..|
T Consensus 81 vi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 81 VITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp EECCCCC----------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred EECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 9987653 2343 45667788899987666654
No 205
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=85.55 E-value=1.9 Score=46.11 Aligned_cols=86 Identities=12% Similarity=0.121 Sum_probs=55.9
Q ss_pred cccccCCcccHHHHHHHHhhCC----CCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1011 HIILCGFGRVGQIIAQLLSERL----IPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g----~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
++.|+|.|.+|..++..|.+.| ++|+++|+++++ .|..+ ..+.+.. ++++|.||+++..+.
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~----~~~~~~~----~~~~D~vi~~v~~~~- 70 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNY----MSSNEEL----ARHCDIIVCAVKPDI- 70 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEE----CSCHHHH----HHHCSEEEECSCTTT-
T ss_pred EEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEE----eCCHHHH----HhcCCEEEEEeCHHH-
Confidence 5889999999999999999988 799999999876 34332 1233221 236899999998653
Q ss_pred hHHHHHHHHhhCCCceEEEEecChh
Q 001096 1087 NYRTVWALSKYFPNVKTFVRAHDID 1111 (1158)
Q Consensus 1087 Nl~i~l~ar~l~p~~~IIara~d~e 1111 (1158)
-..+...++...++..++.-.+...
T Consensus 71 ~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 71 AGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp HHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCC
Confidence 2233333433334444554444433
No 206
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=85.35 E-value=0.68 Score=53.29 Aligned_cols=73 Identities=15% Similarity=0.125 Sum_probs=58.1
Q ss_pred ccccccC-CcccHHHHHHHHhhCC-CCEEEEeCCchHHHHhhh----------CCCCEEEccCCCHHHHHhcC-ccccCE
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERL-IPFVALDVRSDRVAIGRA----------LDLPVYFGDAGSREVLHKVG-AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g-~~VvVID~d~~~v~~l~~----------~g~~vi~GDasd~e~L~~Ag-I~~A~~ 1076 (1158)
..++|.| .|.+|..++++|.+.| +.|+++++++.......+ .++.++.||.+|++.+..+- ..+.|.
T Consensus 36 k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 115 (399)
T 3nzo_A 36 SRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQYDY 115 (399)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCCSE
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCCCE
Confidence 4578888 5889999999999999 799999999887654432 46888999999999887652 357888
Q ss_pred EEEecC
Q 001096 1077 AAITLD 1082 (1158)
Q Consensus 1077 VIi~t~ 1082 (1158)
|+-+..
T Consensus 116 Vih~Aa 121 (399)
T 3nzo_A 116 VLNLSA 121 (399)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 876543
No 207
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=85.33 E-value=1.1 Score=49.69 Aligned_cols=73 Identities=14% Similarity=0.048 Sum_probs=54.8
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCc----------hHHHHhh---hCCCCEEEccCCCHHHHHhcCcc-cc
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRS----------DRVAIGR---ALDLPVYFGDAGSREVLHKVGAE-RA 1074 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~----------~~v~~l~---~~g~~vi~GDasd~e~L~~AgI~-~A 1074 (1158)
..++|.| .|-+|..+++.|.+.|++|++++++. +..+.+. ..++.++.+|.+|++.++++=-+ +.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCC
Confidence 4578887 59999999999999999999998643 3333333 34678999999999988765211 57
Q ss_pred CEEEEecC
Q 001096 1075 CAAAITLD 1082 (1158)
Q Consensus 1075 ~~VIi~t~ 1082 (1158)
|+||-+..
T Consensus 83 d~vih~A~ 90 (348)
T 1ek6_A 83 MAVIHFAG 90 (348)
T ss_dssp EEEEECCS
T ss_pred CEEEECCC
Confidence 88877654
No 208
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=85.24 E-value=2.2 Score=38.07 Aligned_cols=98 Identities=14% Similarity=0.168 Sum_probs=60.8
Q ss_pred CEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhC--CCceEEEE
Q 001096 1034 PFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYF--PNVKTFVR 1106 (1158)
Q Consensus 1034 ~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~--p~~~IIar 1106 (1158)
.+.++|.|+...+.+ ...|+.+...+ +..+.+..+.-...+.+++-...+. ....++..+++.. +++++|+.
T Consensus 3 ~iliv~~~~~~~~~l~~~l~~~g~~v~~~~-~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~ 81 (119)
T 2j48_A 3 HILLLEEEDEAATVVCEMLTAAGFKVIWLV-DGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLF 81 (119)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCEEEEES-CHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCcEEEEec-CHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEE
Confidence 466666666544322 34566555422 2234444443346788877765443 3456777888875 78888888
Q ss_pred ecChhhHHHHHHCCCCeeecCCcHHHH
Q 001096 1107 AHDIDHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1107 a~d~e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+...+.. ...+.|++.++........
T Consensus 82 ~~~~~~~-~~~~~g~~~~l~kp~~~~~ 107 (119)
T 2j48_A 82 LGEPPVD-PLLTAQASAILSKPLDPQL 107 (119)
T ss_dssp ESSCCSS-HHHHHHCSEECSSCSTTHH
T ss_pred eCCCCch-hhhhcCHHHhccCCCCHHH
Confidence 7766555 8888999988776554444
No 209
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=85.12 E-value=0.71 Score=52.18 Aligned_cols=72 Identities=11% Similarity=-0.043 Sum_probs=57.1
Q ss_pred cccccCC-cccHHHHHHHHhhCC-CCEEEEeCCchHH-HHhh-hCCCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERL-IPFVALDVRSDRV-AIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g-~~VvVID~d~~~v-~~l~-~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
.++|.|. |-+|..+++.|.+.| ++|+++++++... +.+. ..++.++.||.+|++.++++ ++++|+||-+...
T Consensus 34 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vih~A~~ 109 (377)
T 2q1s_A 34 NVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASL-QDEYDYVFHLATY 109 (377)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHC-CSCCSEEEECCCC
T ss_pred EEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHH-hhCCCEEEECCCc
Confidence 5888885 899999999999999 9999999876542 2222 34677889999999999876 3578998877653
No 210
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.12 E-value=1.4 Score=49.52 Aligned_cols=104 Identities=13% Similarity=0.083 Sum_probs=63.2
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-----------CCCCEEEccCCCHHH---------HHhc
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----------LDLPVYFGDAGSREV---------LHKV 1069 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-----------~g~~vi~GDasd~e~---------L~~A 1069 (1158)
.++.|+|.|.+|..++..|...|++|+++|.+++..+.+.+ .|+ +.|..+..+. +.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~--~~g~~~~~~~~~~i~~~~~~~e- 83 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGS--LKGSLSAEEQLSLISSCTNLAE- 83 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTC--CCSSSCHHHHHHTEEEECCHHH-
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCc--cccccchHHHhhceEEeCCHHH-
Confidence 46889999999999999999999999999999998877632 332 1111000111 111
Q ss_pred CccccCEEEEecCCchhhH-HHHHHHHhhCCCceEEEEecChhhHHHH
Q 001096 1070 GAERACAAAITLDTPGANY-RTVWALSKYFPNVKTFVRAHDIDHGLNL 1116 (1158)
Q Consensus 1070 gI~~A~~VIi~t~dd~~Nl-~i~l~ar~l~p~~~IIara~d~e~~~~L 1116 (1158)
-+++||.||.+++++..-. .+...+...-+.-.|++...+.-....+
T Consensus 84 av~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~l 131 (319)
T 2dpo_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKL 131 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHH
T ss_pred HHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHH
Confidence 1468999999998763322 2222333333333455544333333344
No 211
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=85.11 E-value=0.85 Score=49.63 Aligned_cols=74 Identities=12% Similarity=0.104 Sum_probs=55.2
Q ss_pred ccccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-----CCCCEEEccCCCHHHHHhc--Cc----cccC
Q 001096 1008 LQDHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----LDLPVYFGDAGSREVLHKV--GA----ERAC 1075 (1158)
Q Consensus 1008 l~~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-----~g~~vi~GDasd~e~L~~A--gI----~~A~ 1075 (1158)
+++.++|.|. +.+|+.+++.|.++|.+|++++++++..+...+ ....++.+|.+|++.++++ .+ .+.|
T Consensus 20 ~~k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 99 (272)
T 2nwq_A 20 MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLR 99 (272)
T ss_dssp -CCEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCC
T ss_pred cCcEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3456778775 579999999999999999999999887665432 1567788999999887654 11 2457
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
++|-..
T Consensus 100 ~lvnnA 105 (272)
T 2nwq_A 100 GLINNA 105 (272)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 777654
No 212
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A
Probab=85.11 E-value=1.2 Score=55.46 Aligned_cols=113 Identities=14% Similarity=0.098 Sum_probs=79.0
Q ss_pred ccccccccccCCccc------HHHHHHHHhhCCC------CEEEEeC-CchH--HHHhhhC-CCCEEEccCCCHHHHHhc
Q 001096 1006 DDLQDHIILCGFGRV------GQIIAQLLSERLI------PFVALDV-RSDR--VAIGRAL-DLPVYFGDAGSREVLHKV 1069 (1158)
Q Consensus 1006 ~~l~~hvVIiG~G~v------G~~Ia~~L~e~g~------~VvVID~-d~~~--v~~l~~~-g~~vi~GDasd~e~L~~A 1069 (1158)
..+++|+|+|++|.. =+....-|+..++ ++|++-. +.-+ ++.++.. .+.++.|.+.....|+++
T Consensus 374 ~~~~~HivvC~~~~~~s~~~gl~~fvmpLRasn~~~~elk~IV~lg~~~~~~~ew~~l~nfp~iy~~~Gspl~~~dL~~~ 453 (726)
T 3mt5_A 374 TVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVSILPGTPLSRADLRAV 453 (726)
T ss_dssp SCCCSCEEEEEECCTTSCCCCTHHHHTGGGBTTSCGGGCCCEEEEECHHHHHHHHHHHTTSSSEEEEESCTTCHHHHHHT
T ss_pred hcccCcEEEEEecCCCCcchhhhhheeecccccCCHhHcCCEEEECCCccCHHHHHHHhcCCceEEecCCcCChHhHHHh
Confidence 578999999998775 4677777876554 5777654 3322 2222322 467788999999999999
Q ss_pred CccccCEEEEecCC----------chhhHHHHHHHHhh------------------------------------------
Q 001096 1070 GAERACAAAITLDT----------PGANYRTVWALSKY------------------------------------------ 1097 (1158)
Q Consensus 1070 gI~~A~~VIi~t~d----------d~~Nl~i~l~ar~l------------------------------------------ 1097 (1158)
+|..|+.+|++... |...+.+++.++..
T Consensus 454 ~i~~c~~cvils~~~~~~~~~~l~D~e~ila~lni~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (726)
T 3mt5_A 454 NINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITT 533 (726)
T ss_dssp TGGGCSEEEEEECC----------CHHHHHHHHHHHTCEEC-----------------------------------CCEE
T ss_pred CHhhCCEEEEecCCCCCcCCcccchhhhhhhhhcccccccccccccccccccccccccccccccccCccchhhhcccccc
Confidence 99999999888652 33445555555553
Q ss_pred CCCceEEEEecChhhHHHHHH
Q 001096 1098 FPNVKTFVRAHDIDHGLNLEK 1118 (1158)
Q Consensus 1098 ~p~~~IIara~d~e~~~~L~~ 1118 (1158)
+++++|+....++.++.-|..
T Consensus 534 ~~~i~iitEL~~~sni~fl~~ 554 (726)
T 3mt5_A 534 GVNIPIITELVNDTNVQFLDQ 554 (726)
T ss_dssp GGGSCEEEEESCGGGGTTSCS
T ss_pred cCCCceEEEecCCccceeeee
Confidence 345678888888887776655
No 213
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=85.07 E-value=0.51 Score=51.15 Aligned_cols=102 Identities=12% Similarity=-0.025 Sum_probs=66.2
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-CCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh-hH
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-NY 1088 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~-Nl 1088 (1158)
++.|+|.|.+|+.++..|.+.|.+|++.|+++++.+.+.+ .|.. . . .+.++ .++|.||.+++.... +.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~--~---~---~~~~~--~~~Divi~~tp~~~~~~~ 187 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR--A---V---PLEKA--REARLLVNATRVGLEDPS 187 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE--E---C---CGGGG--GGCSEEEECSSTTTTCTT
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc--h---h---hHhhc--cCCCEEEEccCCCCCCCC
Confidence 7999999999999999999999999999999988766543 2432 1 1 23444 689999999987731 10
Q ss_pred HHHHHHHhhCCCceEEEEecChh---hHHHHHHCCCC
Q 001096 1089 RTVWALSKYFPNVKTFVRAHDID---HGLNLEKAGAT 1122 (1158)
Q Consensus 1089 ~i~l~ar~l~p~~~IIara~d~e---~~~~L~~aGAd 1122 (1158)
.-......+.+...++-...++. ..+..++.|+.
T Consensus 188 ~~~l~~~~l~~g~~viD~~~~p~~t~l~~~a~~~g~~ 224 (263)
T 2d5c_A 188 ASPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGLK 224 (263)
T ss_dssp CCSSCGGGSCSSSEEEESCCSSSSCHHHHHHHHTTCE
T ss_pred CCCCCHHHcCCCCEEEEeecCCcccHHHHHHHHCcCE
Confidence 00001223445544443333332 34556677884
No 214
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*
Probab=85.04 E-value=10 Score=42.82 Aligned_cols=89 Identities=19% Similarity=0.202 Sum_probs=52.2
Q ss_pred HHHHhhcccchhHHHHHhHHhHHHHHHHHHHHHHhcccChhhhhh---hhhhHHHHHHHHHHHHHHHHHHHHHhcCCChh
Q 001096 852 LAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLS---NFPVITGALGLLIGGKTILVALVGRLFGVSVI 928 (1158)
Q Consensus 852 vAGLiL~n~~~~~~l~e~l~~~~~~flPlFFvliGm~idl~~L~~---~~~~vllllvl~ll~K~l~v~l~~~~~g~~~r 928 (1158)
+.|+.+|+... .+++.....+.+.+...|+++++..+.. ++...+..++.-++..++..+..++.++.+..
T Consensus 29 ~lg~~~P~~~~------~~~~~i~~~l~~~mf~~G~~l~~~~l~~~~~~~~~~~~~l~~~~vi~Pll~~~l~~~~~l~~~ 102 (332)
T 3zux_A 29 AAAFFAPDTFK------WAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAE 102 (332)
T ss_dssp HHHHHCGGGTG------GGGGGHHHHHHHHHHHHHHHCCGGGGHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHcchhhh------hhHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCCChH
Confidence 55666665321 1233344567777888999999888864 34444444555566777888888877776653
Q ss_pred hHHHHhh-hccccchhhHH
Q 001096 929 SAIRTGL-LLAPGGEFAFV 946 (1158)
Q Consensus 929 eal~lgL-~La~rG~valv 946 (1158)
....+-+ ..+|-|..+.+
T Consensus 103 ~~~Glil~~~~P~~~~s~v 121 (332)
T 3zux_A 103 IAVGVILVGCCPGGTASNV 121 (332)
T ss_dssp HHHHHHHHHHSCCCTHHHH
T ss_pred HHHHHHHHhcCCchhHHHH
Confidence 3322212 23455555544
No 215
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=84.99 E-value=1 Score=50.77 Aligned_cols=66 Identities=20% Similarity=0.191 Sum_probs=50.8
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
..+.|+|+|.+|+.+++.|...|.+|++.|.++++.+...+.|.... +.+.+ +.++|.|++.++..
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~l~e~----l~~aDvVi~~vp~~ 221 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV-----STPEL----AAQSDFIVVACSLT 221 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC-----CHHHH----HHHCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC-----CHHHH----HhhCCEEEEeCCCC
Confidence 35889999999999999999999999999998876665655554321 33222 24689999999765
No 216
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=84.98 E-value=0.56 Score=51.87 Aligned_cols=71 Identities=14% Similarity=0.105 Sum_probs=52.8
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHH---HHhhh-----CCCCEEEccCCCHHHHHhcCccccCEEEEe
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRV---AIGRA-----LDLPVYFGDAGSREVLHKVGAERACAAAIT 1080 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v---~~l~~-----~g~~vi~GDasd~e~L~~AgI~~A~~VIi~ 1080 (1158)
++++|.| .|-+|..+++.|.++|++|+++.++++.. ..+.+ .++.++.||.+|++.++++ ++++|+||-+
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~ 84 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEA-IKGCTGVFHV 84 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHH-HTTCSEEEEC
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHH-HcCCCEEEEe
Confidence 4578888 78999999999999999999888877632 22211 1466889999998877665 3467887754
Q ss_pred c
Q 001096 1081 L 1081 (1158)
Q Consensus 1081 t 1081 (1158)
.
T Consensus 85 A 85 (337)
T 2c29_D 85 A 85 (337)
T ss_dssp C
T ss_pred c
Confidence 3
No 217
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=84.92 E-value=2.7 Score=46.18 Aligned_cols=39 Identities=28% Similarity=0.302 Sum_probs=35.6
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIG 1048 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l 1048 (1158)
.++.|+|.|.+|..++..|...|++|+++|.++++.+.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKS 54 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 468999999999999999999999999999999887754
No 218
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=84.91 E-value=1.8 Score=49.09 Aligned_cols=86 Identities=14% Similarity=0.046 Sum_probs=57.4
Q ss_pred cccc-cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch
Q 001096 1007 DLQD-HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1007 ~l~~-hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
.+.+ .+.|+|+|.+|+.+++.|+..|.+|++.|++++.... +.|... .+.+.+ +.++|.|++.++...
T Consensus 138 ~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~~g~~~-----~~l~el----l~~aDvV~l~~P~t~ 206 (334)
T 2pi1_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK--EKGCVY-----TSLDEL----LKESDVISLHVPYTK 206 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH--HTTCEE-----CCHHHH----HHHCSEEEECCCCCT
T ss_pred eccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH--hcCcee-----cCHHHH----HhhCCEEEEeCCCCh
Confidence 3443 5889999999999999999999999999998876532 345432 123222 347899999887643
Q ss_pred hh--HHHHHHHHhhCCCceE
Q 001096 1086 AN--YRTVWALSKYFPNVKT 1103 (1158)
Q Consensus 1086 ~N--l~i~l~ar~l~p~~~I 1103 (1158)
.+ +.-...+....|...+
T Consensus 207 ~t~~li~~~~l~~mk~gail 226 (334)
T 2pi1_A 207 ETHHMINEERISLMKDGVYL 226 (334)
T ss_dssp TTTTCBCHHHHHHSCTTEEE
T ss_pred HHHHhhCHHHHhhCCCCcEE
Confidence 22 2223445555555433
No 219
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=84.88 E-value=0.5 Score=52.58 Aligned_cols=71 Identities=10% Similarity=0.011 Sum_probs=55.5
Q ss_pred cccccC-CcccHHHHHHHHhhCC-----CCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhc--CccccCEEEEecC
Q 001096 1011 HIILCG-FGRVGQIIAQLLSERL-----IPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKV--GAERACAAAITLD 1082 (1158)
Q Consensus 1011 hvVIiG-~G~vG~~Ia~~L~e~g-----~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~A--gI~~A~~VIi~t~ 1082 (1158)
+++|.| .|-+|..+++.|.+.| ++|+++++++.... ....++.++.||.+|++.+.++ +..++|+||-+..
T Consensus 3 ~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~ 81 (364)
T 2v6g_A 3 VALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTW 81 (364)
T ss_dssp EEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECCC
Confidence 477887 4899999999999999 99999998876532 2334788999999999988765 2223888887754
No 220
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=84.87 E-value=5.5 Score=37.42 Aligned_cols=100 Identities=5% Similarity=-0.052 Sum_probs=66.7
Q ss_pred CCCEEEEeCCchHHHHh----hh-CCCCEEEccCCCHHHHHhcCc-cccCEEEEecCCc-h-hhHHHHHHHHh--hCCCc
Q 001096 1032 LIPFVALDVRSDRVAIG----RA-LDLPVYFGDAGSREVLHKVGA-ERACAAAITLDTP-G-ANYRTVWALSK--YFPNV 1101 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l----~~-~g~~vi~GDasd~e~L~~AgI-~~A~~VIi~t~dd-~-~Nl~i~l~ar~--l~p~~ 1101 (1158)
...|.++|.|+.....+ .+ .|+.++.- .+-.+.++.+.- ...+.|++-..-+ . .-+.++..+|+ .+|++
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~~~~v~~~-~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~ 82 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIGEYDFIEV-ENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANT 82 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHCCCEEEEE-CSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhccCccEEEE-CCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCC
Confidence 45677788777654433 44 57766632 223455566555 6788888777655 4 34667888888 78899
Q ss_pred eEEEEecC--hhhHHHHHHCCCCeeecCCcHHH
Q 001096 1102 KTFVRAHD--IDHGLNLEKAGATAVVPETLEPS 1132 (1158)
Q Consensus 1102 ~IIara~d--~e~~~~L~~aGAd~VI~p~~~a~ 1132 (1158)
+||+.+.. .+......++|++.++.......
T Consensus 83 ~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~ 115 (140)
T 3lua_A 83 PVIIATKSDNPGYRHAALKFKVSDYILKPYPTK 115 (140)
T ss_dssp CEEEEESCCCHHHHHHHHHSCCSEEEESSCCTT
T ss_pred CEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHH
Confidence 98888765 45667778999998876654443
No 221
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=84.86 E-value=0.82 Score=48.27 Aligned_cols=73 Identities=16% Similarity=0.120 Sum_probs=54.7
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC--CCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~--g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++++..+.. +.. ...++.+|.+|++.++++- ..+.|+
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 91 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI 91 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 45777775 7799999999999999999999998765433 222 4567789999998887651 126788
Q ss_pred EEEecC
Q 001096 1077 AAITLD 1082 (1158)
Q Consensus 1077 VIi~t~ 1082 (1158)
||-...
T Consensus 92 vi~~Ag 97 (255)
T 1fmc_A 92 LVNNAG 97 (255)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 776553
No 222
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=84.84 E-value=1.7 Score=48.28 Aligned_cols=109 Identities=18% Similarity=0.113 Sum_probs=68.2
Q ss_pred cccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHHHh-hh--CCC-----CEEEccCCCHHHHHhcCccccCEEEEe
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIG-RA--LDL-----PVYFGDAGSREVLHKVGAERACAAAIT 1080 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~~l-~~--~g~-----~vi~GDasd~e~L~~AgI~~A~~VIi~ 1080 (1158)
.+.|+|.|.+|..++..|...|+ +++++|.|+++.+.. .+ .+. .-+.. .+ . ..+++||.||++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~~---~--~a~~~aDvVIi~ 74 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH--GG---H--SELADAQVVILT 74 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE--EC---G--GGGTTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE--CC---H--HHhCCCCEEEEc
Confidence 47899999999999999999998 999999998866432 11 111 11222 12 1 237799999999
Q ss_pred cCCch-----------hhHH----HHHHHHhhCCCceEEEEecChhhH--HHHHH-CCCCeeecC
Q 001096 1081 LDTPG-----------ANYR----TVWALSKYFPNVKTFVRAHDIDHG--LNLEK-AGATAVVPE 1127 (1158)
Q Consensus 1081 t~dd~-----------~Nl~----i~l~ar~l~p~~~IIara~d~e~~--~~L~~-aGAd~VI~p 1127 (1158)
.+.+. .|+. ++..+.+..|+..++. +.|+.+. ..+.+ ....+|+--
T Consensus 75 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~-~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 75 AGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLV-TSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHCSSSEEEE-CSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEE-ecCchHHHHHHHHHhCChhcEEeC
Confidence 86553 3543 3455666788877766 5555433 33333 355566543
No 223
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=84.84 E-value=0.43 Score=52.62 Aligned_cols=70 Identities=16% Similarity=0.197 Sum_probs=53.8
Q ss_pred cccccCC-cccHHHHHHHHhhC-CCCEEEEeCCchHHHHhh-hCCCCEEEccCCCH-HHHHhcCccccCEEEEec
Q 001096 1011 HIILCGF-GRVGQIIAQLLSER-LIPFVALDVRSDRVAIGR-ALDLPVYFGDAGSR-EVLHKVGAERACAAAITL 1081 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~-g~~VvVID~d~~~v~~l~-~~g~~vi~GDasd~-e~L~~AgI~~A~~VIi~t 1081 (1158)
+++|.|. |-+|..+++.|.+. |++|++++++++....+. ..++.++.||.+|+ +.++++ ++++|+||-+.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~~d~vih~A 75 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYH-VKKCDVVLPLV 75 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHH-HHHCSEEEECB
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhh-ccCCCEEEEcc
Confidence 4678886 99999999999998 899999999987765442 34678899999984 445543 34688888654
No 224
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=84.74 E-value=5 Score=37.39 Aligned_cols=101 Identities=8% Similarity=0.060 Sum_probs=61.9
Q ss_pred CCCEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCccc-cCEEEEecCCch-hhHHHHHHHHhh-CCCceEE
Q 001096 1032 LIPFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAER-ACAAAITLDTPG-ANYRTVWALSKY-FPNVKTF 1104 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~~-A~~VIi~t~dd~-~Nl~i~l~ar~l-~p~~~II 1104 (1158)
...|.++|.|+...+. +.+.|+.+..-+ +..+.+..+.-.. .+.+++-..-+. .-+.++..+|+. +|+++||
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii 85 (136)
T 3hdv_A 7 RPLVLVVDDNAVNREALILYLKSRGIDAVGAD-GAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSII 85 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCCEEEES-SHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCceEEEeC-CHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEE
Confidence 3456777766654432 234566655422 2233333332233 677776665443 446678888888 6888888
Q ss_pred EEecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1105 VRAHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1105 ara~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+.+... +......++|++.++........
T Consensus 86 ~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~ 116 (136)
T 3hdv_A 86 VVSGDTDVEEAVDVMHLGVVDFLLKPVDLGK 116 (136)
T ss_dssp EEESSCCHHHHHHHHHTTCSEEEESSCCHHH
T ss_pred EEeCCCChHHHHHHHhCCcceEEeCCCCHHH
Confidence 887654 45667788999998877665554
No 225
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=84.73 E-value=0.69 Score=53.20 Aligned_cols=99 Identities=18% Similarity=0.078 Sum_probs=66.5
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCC----------------------CHHHH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAG----------------------SREVL 1066 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDas----------------------d~e~L 1066 (1158)
...++|+|.|.+|..+++.++..|..|+++|.++++.+.+++.|..++.-|.. +++.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l 251 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAV 251 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHH
Confidence 45799999999999999999999999999999999888777777665411111 12224
Q ss_pred HhcCccccCEEEEec---CCchhhHHHHHHHHhhCCCceEEEEec
Q 001096 1067 HKVGAERACAAAITL---DTPGANYRTVWALSKYFPNVKTFVRAH 1108 (1158)
Q Consensus 1067 ~~AgI~~A~~VIi~t---~dd~~Nl~i~l~ar~l~p~~~IIara~ 1108 (1158)
.+. +.++|.||.++ +.+...+.....++...|...++-.+.
T Consensus 252 ~~~-~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 252 LKE-LVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp HHH-HTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred HHH-hCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence 332 34799999888 322222222345566667666665553
No 226
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=84.71 E-value=0.39 Score=51.74 Aligned_cols=68 Identities=10% Similarity=0.103 Sum_probs=55.2
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEec
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITL 1081 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t 1081 (1158)
+.++|.| .|.+|+.+++.|.++|+.|+++++++.... ..+..++.+|.+|++.++++ +++.|+||-..
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~A 72 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAM-VAGCDGIVHLG 72 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHH-HTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHH-HcCCCEEEECC
Confidence 3577887 688999999999999999999999876533 44678899999999998775 34788887664
No 227
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=84.70 E-value=1.2 Score=47.65 Aligned_cols=73 Identities=14% Similarity=-0.043 Sum_probs=55.5
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC---CCCEEEccCCCHHHHHhcCc------cccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL---DLPVYFGDAGSREVLHKVGA------ERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~---g~~vi~GDasd~e~L~~AgI------~~A~~VIi 1079 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++++..+...+. +..++.+|.+|++.++++=- .+.|++|-
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~ 92 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCA 92 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45777775 5699999999999999999999998877655332 57788999999988765411 15778776
Q ss_pred ecC
Q 001096 1080 TLD 1082 (1158)
Q Consensus 1080 ~t~ 1082 (1158)
..+
T Consensus 93 ~Ag 95 (263)
T 3ak4_A 93 NAG 95 (263)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 228
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=84.69 E-value=2.4 Score=47.48 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=50.8
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
..+.|+|+|.+|+.+++.|...|.+|+++|++++.. ...+.|... .+.+.+- .++|.|++.++...
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~-----~~l~ell----~~aDvVvl~~P~~~ 208 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKA-----VSLEELL----KNSDVISLHVTVSK 208 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEE-----CCHHHHH----HHCSEEEECCCCCT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCcee-----cCHHHHH----hhCCEEEEeccCCh
Confidence 468899999999999999999999999999998764 355566542 1333322 36899999998654
No 229
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=84.58 E-value=1.2 Score=52.59 Aligned_cols=73 Identities=25% Similarity=0.221 Sum_probs=55.8
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhc--------------CccccC
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKV--------------GAERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~A--------------gI~~A~ 1075 (1158)
..+.|+|.|.+|..++-.|.+.|++|+.+|.|+++++.+++-..++ .++.-++.++++ .+.+++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi--~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHI--YEPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSS--CCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCC--CCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 3588899999999999999999999999999999999987654443 245444444331 145678
Q ss_pred EEEEecCCc
Q 001096 1076 AAAITLDTP 1084 (1158)
Q Consensus 1076 ~VIi~t~dd 1084 (1158)
+++++.+.+
T Consensus 100 ~~~I~VpTP 108 (444)
T 3vtf_A 100 ATFIAVGTP 108 (444)
T ss_dssp EEEECCCCC
T ss_pred ceEEEecCC
Confidence 988887654
No 230
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=84.56 E-value=1.1 Score=47.78 Aligned_cols=72 Identities=19% Similarity=0.130 Sum_probs=55.6
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC--CCCEEEccCCCHHHHHhcCc------cccCEEEEe
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL--DLPVYFGDAGSREVLHKVGA------ERACAAAIT 1080 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~--g~~vi~GDasd~e~L~~AgI------~~A~~VIi~ 1080 (1158)
+.++|.|. +-+|+.+++.|.++|..|+++|++++..+...+. +..++.+|.+|++.++++=- .+.|.+|-.
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 82 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN 82 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 45777775 5699999999999999999999999887766443 45688899999988765421 257777765
Q ss_pred c
Q 001096 1081 L 1081 (1158)
Q Consensus 1081 t 1081 (1158)
.
T Consensus 83 A 83 (247)
T 3dii_A 83 A 83 (247)
T ss_dssp C
T ss_pred C
Confidence 5
No 231
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=84.46 E-value=1.4 Score=46.99 Aligned_cols=75 Identities=12% Similarity=-0.052 Sum_probs=54.0
Q ss_pred cccccccccCC---cccHHHHHHHHhhCCCCEEEEeCCchHHH---Hhhh--CCCCEEEccCCCHHHHHhcC------cc
Q 001096 1007 DLQDHIILCGF---GRVGQIIAQLLSERLIPFVALDVRSDRVA---IGRA--LDLPVYFGDAGSREVLHKVG------AE 1072 (1158)
Q Consensus 1007 ~l~~hvVIiG~---G~vG~~Ia~~L~e~g~~VvVID~d~~~v~---~l~~--~g~~vi~GDasd~e~L~~Ag------I~ 1072 (1158)
...+.++|.|. +.+|+.+++.|.++|..|++++++....+ .+.+ ....++.+|.+|++.++++= ..
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 91 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD 91 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 33567888886 48999999999999999999988754333 2211 24788999999998876541 12
Q ss_pred ccCEEEEec
Q 001096 1073 RACAAAITL 1081 (1158)
Q Consensus 1073 ~A~~VIi~t 1081 (1158)
+.|++|-..
T Consensus 92 ~id~lv~nA 100 (271)
T 3ek2_A 92 SLDGLVHSI 100 (271)
T ss_dssp CEEEEEECC
T ss_pred CCCEEEECC
Confidence 567776543
No 232
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=84.43 E-value=2.6 Score=47.58 Aligned_cols=92 Identities=22% Similarity=0.272 Sum_probs=65.6
Q ss_pred ccccccCCcccHHHHHHHHhhCCC-CEEEEeCCchHHH----Hhhh------CCCCEE-EccCCCHHHHHhcCccccCEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVA----IGRA------LDLPVY-FGDAGSREVLHKVGAERACAA 1077 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~~~v~----~l~~------~g~~vi-~GDasd~e~L~~AgI~~A~~V 1077 (1158)
.++.|+|.|.+|..++..|...++ +++++|.++++++ .+.+ ....+. .+|. ..+++||.|
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~--------~a~~~aDiV 79 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY--------AAIEGADVV 79 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG--------GGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH--------HHHCCCCEE
Confidence 468999999999999999999988 9999999998764 1221 133444 2331 246789999
Q ss_pred EEecCCc-----------hhhHH----HHHHHHhhCCCceEEEEecC
Q 001096 1078 AITLDTP-----------GANYR----TVWALSKYFPNVKTFVRAHD 1109 (1158)
Q Consensus 1078 Ii~t~dd-----------~~Nl~----i~l~ar~l~p~~~IIara~d 1109 (1158)
|++.+.+ ..|.. ++..+++.+|+..+++-.|=
T Consensus 80 Iiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNP 126 (324)
T 3gvi_A 80 IVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNP 126 (324)
T ss_dssp EECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred EEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence 9987543 23543 45567778899877776653
No 233
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=84.38 E-value=5.6 Score=37.10 Aligned_cols=100 Identities=17% Similarity=0.111 Sum_probs=64.0
Q ss_pred CCEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEEe
Q 001096 1033 IPFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRA 1107 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIara 1107 (1158)
..+.++|.|+...+. +...|+.+... .+..+.++.+.-...+.+++-..-+. .-+.++..+|+..|.+++|+.+
T Consensus 4 ~~Ilivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s 82 (132)
T 3crn_A 4 KRILIVDDDTAILDSTKQILEFEGYEVEIA-ATAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVT 82 (132)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEE-SSHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEE
T ss_pred cEEEEEeCCHHHHHHHHHHHHHCCceEEEe-CCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEe
Confidence 357777777665432 24456665532 12244555544456788877665543 3356777888888888888877
Q ss_pred cC--hhhHHHHHHCCCCeeecCCcHHHH
Q 001096 1108 HD--IDHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1108 ~d--~e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.. .+......++|++..+........
T Consensus 83 ~~~~~~~~~~~~~~ga~~~l~KP~~~~~ 110 (132)
T 3crn_A 83 GYASLENSVFSLNAGADAYIMKPVNPRD 110 (132)
T ss_dssp SCCCHHHHHHHHHTTCSEEEESSCCHHH
T ss_pred ccccHHHHHHHHhccchhhccCCCCHHH
Confidence 65 455667778999998876655544
No 234
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=84.36 E-value=1.7 Score=48.13 Aligned_cols=72 Identities=21% Similarity=0.261 Sum_probs=54.5
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHH-HHhhh-CCCCEEEccCCCHHHHHhcCcc--ccCEEEEecC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRV-AIGRA-LDLPVYFGDAGSREVLHKVGAE--RACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v-~~l~~-~g~~vi~GDasd~e~L~~AgI~--~A~~VIi~t~ 1082 (1158)
..++|.| .|.+|+.+++.|.+.|++|+++++++... +.+.+ .++.++.||.+|++.++++ ++ +.|+||-+..
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~D~vih~A~ 98 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQL-IGDLQPDAVVHTAA 98 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHH-HHHHCCSEEEECCC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHH-HhccCCcEEEECce
Confidence 3578887 58999999999999999999999875432 22222 3677899999999988765 23 3888887654
No 235
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=84.36 E-value=2.9 Score=49.33 Aligned_cols=68 Identities=13% Similarity=0.101 Sum_probs=51.0
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-----------CC----------CCEEEccCCCHHHHHh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----------LD----------LPVYFGDAGSREVLHK 1068 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-----------~g----------~~vi~GDasd~e~L~~ 1068 (1158)
.++.|+|.|.+|..++..|...|++|+++|.+++..+.+.+ .| ...+.. +.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~---- 110 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSS---STK---- 110 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEES---CGG----
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcC---CHH----
Confidence 46889999999999999999999999999999987765432 11 011222 222
Q ss_pred cCccccCEEEEecCCch
Q 001096 1069 VGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1069 AgI~~A~~VIi~t~dd~ 1085 (1158)
.+.+||.||.++.++.
T Consensus 111 -~~~~aDlVIeaVpe~~ 126 (463)
T 1zcj_A 111 -ELSTVDLVVEAVFEDM 126 (463)
T ss_dssp -GGTTCSEEEECCCSCH
T ss_pred -HHCCCCEEEEcCCCCH
Confidence 2568999999998764
No 236
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=84.30 E-value=1.3 Score=48.71 Aligned_cols=73 Identities=16% Similarity=0.039 Sum_probs=55.8
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHH----Hh---hhCCCCEEEccCCCHHHHHhcCc-cccCEEEEe
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVA----IG---RALDLPVYFGDAGSREVLHKVGA-ERACAAAIT 1080 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~----~l---~~~g~~vi~GDasd~e~L~~AgI-~~A~~VIi~ 1080 (1158)
..++|.| .|-+|..+++.|.+.|++|++++++++... .+ ...+..++.+|.+|++.++++=- .+.|+||-+
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 85 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF 85 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence 4688888 588999999999999999999998755432 22 13478899999999998877522 267888766
Q ss_pred cC
Q 001096 1081 LD 1082 (1158)
Q Consensus 1081 t~ 1082 (1158)
..
T Consensus 86 A~ 87 (341)
T 3enk_A 86 AA 87 (341)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 237
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=84.20 E-value=2.9 Score=47.00 Aligned_cols=117 Identities=17% Similarity=0.103 Sum_probs=72.9
Q ss_pred ccccccC-CcccHHHHHHHHhhCC--CCEEEEeCCchHH--HHhhhCCCC-EEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERL--IPFVALDVRSDRV--AIGRALDLP-VYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g--~~VvVID~d~~~v--~~l~~~g~~-vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
..++|+| .|.+|..++..|...+ .+++++|.+++.. ..+.+...+ -+.+ ..+...++++ +++||+||++.+.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~a-l~gaDvVi~~ag~ 86 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAA-LTGMDLIIVPAGV 86 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHH-HTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHH-cCCCCEEEEcCCc
Confidence 3689999 7999999999998888 7899999887722 223332222 2333 1223334332 4689999998864
Q ss_pred c-----------hhhHH----HHHHHHhhCCCceEEEEecChhhH------HHHHHC-C--CCeeecCCc
Q 001096 1084 P-----------GANYR----TVWALSKYFPNVKTFVRAHDIDHG------LNLEKA-G--ATAVVPETL 1129 (1158)
Q Consensus 1084 d-----------~~Nl~----i~l~ar~l~p~~~IIara~d~e~~------~~L~~a-G--Ad~VI~p~~ 1129 (1158)
+ ..|.. ++..+++..|+..++.. .++-+. +.+++. | ..+|+--..
T Consensus 87 ~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~-SNPv~~~~~~~t~~~~~~~~~p~~rviG~~~ 155 (326)
T 1smk_A 87 PRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLI-SNPVNSTVPIAAEVFKKAGTYDPKRLLGVTM 155 (326)
T ss_dssp CCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEC-CSSHHHHHHHHHHHHHHHTCCCTTSEEECCH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE-CCchHHHHHHHHHHHHHccCCCcccEEEEee
Confidence 3 23433 45567778898777774 555544 223442 3 356665544
No 238
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=84.17 E-value=1.4 Score=48.55 Aligned_cols=35 Identities=26% Similarity=0.504 Sum_probs=32.0
Q ss_pred cccccccC-CcccHHHHHHHHhhCCCCEEEEeCCch
Q 001096 1009 QDHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSD 1043 (1158)
Q Consensus 1009 ~~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~ 1043 (1158)
...+.|+| .|.+|..++..|.+.|++|+++|.+++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 34689999 999999999999999999999999875
No 239
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=84.15 E-value=0.91 Score=51.85 Aligned_cols=87 Identities=13% Similarity=0.060 Sum_probs=60.0
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh--
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-- 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N-- 1087 (1158)
..+-|+|+|++|+.+++.|+..|.+|++.|+++...+...+.|.... .+.+.+ +.++|.|++.++....+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~l~el----l~~aDvV~l~~Plt~~t~~ 236 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV----EDLNEM----LPKCDVIVINMPLTEKTRG 236 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC----SCHHHH----GGGCSEEEECSCCCTTTTT
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc----CCHHHH----HhcCCEEEECCCCCHHHHH
Confidence 46889999999999999999999999999988765555555565332 233333 45799999998864322
Q ss_pred HHHHHHHHhhCCCceEE
Q 001096 1088 YRTVWALSKYFPNVKTF 1104 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~II 1104 (1158)
+.-...+....|...+|
T Consensus 237 li~~~~l~~mk~gailI 253 (351)
T 3jtm_A 237 MFNKELIGKLKKGVLIV 253 (351)
T ss_dssp CBSHHHHHHSCTTEEEE
T ss_pred hhcHHHHhcCCCCCEEE
Confidence 22234455566664444
No 240
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=84.12 E-value=0.89 Score=51.74 Aligned_cols=68 Identities=21% Similarity=0.178 Sum_probs=51.2
Q ss_pred ccccccCCcccHHHHHHHHh-hCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch
Q 001096 1010 DHIILCGFGRVGQIIAQLLS-ERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~-e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
..+.|+|+|.+|+.+++.+. ..|.+|++.|.+++..+...+.|.... .+.+.+ +.++|.|++.++...
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~~l~el----l~~aDvVil~vp~~~ 232 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV----DSLEEL----ARRSDCVSVSVPYMK 232 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC----SSHHHH----HHHCSEEEECCCCSG
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe----CCHHHH----hccCCEEEEeCCCCh
Confidence 45889999999999999999 999999999998876655554455432 233332 236899999987754
No 241
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=84.10 E-value=5.7 Score=38.07 Aligned_cols=62 Identities=6% Similarity=0.029 Sum_probs=44.3
Q ss_pred cccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEEecCh--hhHHHHHHCC-CCeeecCCcHHHH
Q 001096 1072 ERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRAHDI--DHGLNLEKAG-ATAVVPETLEPSL 1133 (1158)
Q Consensus 1072 ~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIara~d~--e~~~~L~~aG-Ad~VI~p~~~a~~ 1133 (1158)
...+.+|+-..-+. .-+.++..+|+.+|+++||+.+... +......+.| ++.++........
T Consensus 57 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~ 122 (153)
T 3hv2_A 57 REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKPWDDQE 122 (153)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEECSSCCHHH
T ss_pred CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEEeCCCCHHH
Confidence 45778777765443 3467788889999999998887754 4555667888 8887776655544
No 242
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=84.07 E-value=1.3 Score=49.24 Aligned_cols=73 Identities=14% Similarity=0.058 Sum_probs=56.2
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhh-----hCCCCEEEccCCCHHHHHhcCcc-ccCEEEEecC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-----ALDLPVYFGDAGSREVLHKVGAE-RACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~-----~~g~~vi~GDasd~e~L~~AgI~-~A~~VIi~t~ 1082 (1158)
..++|.| .|.+|..+++.|.+.|++|++++++++....+. ..++.++.||.+|++.+.++=-. +.|+||-+..
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 89 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAA 89 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECCC
Confidence 3578888 599999999999999999999998876433221 24688999999999988765211 4788887765
No 243
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=84.01 E-value=0.81 Score=49.93 Aligned_cols=71 Identities=17% Similarity=0.153 Sum_probs=52.0
Q ss_pred cccccCC-cccHHHHHHHHhhCCCCEEEEeCCchH-HHHhhhCCCCEEEccCCCHHHHHhcCc-cccCEEEEecC
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDR-VAIGRALDLPVYFGDAGSREVLHKVGA-ERACAAAITLD 1082 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~-v~~l~~~g~~vi~GDasd~e~L~~AgI-~~A~~VIi~t~ 1082 (1158)
+++|.|. |-+|..+++.|.+.|++|++++++... .+.+ ..++.++.+|.+|++.++++=- ...+.|+-+..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~ 75 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAA 75 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS-CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc-ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence 3677775 889999999999999999999874332 1112 2467889999999988876521 15778776654
No 244
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=84.01 E-value=1.1 Score=48.22 Aligned_cols=73 Identities=16% Similarity=0.057 Sum_probs=56.2
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHH-HHhhhCCCCEEEccCCCHHHHHhcC------ccccCEEEEec
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRV-AIGRALDLPVYFGDAGSREVLHKVG------AERACAAAITL 1081 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v-~~l~~~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi~t 1081 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++.. +.+.+.+..++.+|.+|++.++++= ..+.|++|-..
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA 107 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNA 107 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 45777775 5699999999999999999999998764 4455567899999999998775431 13577877554
Q ss_pred C
Q 001096 1082 D 1082 (1158)
Q Consensus 1082 ~ 1082 (1158)
+
T Consensus 108 g 108 (260)
T 3gem_A 108 S 108 (260)
T ss_dssp C
T ss_pred C
Confidence 3
No 245
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=83.96 E-value=1.6 Score=46.95 Aligned_cols=60 Identities=18% Similarity=0.164 Sum_probs=48.0
Q ss_pred ccccccC---CcccHHHHHHHHhhCCCCEEEEeCCchH-HHHhhh---CCCCEEEccCCCHHHHHhc
Q 001096 1010 DHIILCG---FGRVGQIIAQLLSERLIPFVALDVRSDR-VAIGRA---LDLPVYFGDAGSREVLHKV 1069 (1158)
Q Consensus 1010 ~hvVIiG---~G~vG~~Ia~~L~e~g~~VvVID~d~~~-v~~l~~---~g~~vi~GDasd~e~L~~A 1069 (1158)
+.++|.| .+-+|+.+++.|.++|.+|++++++++. .+...+ ....++.+|.+|++.++++
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 74 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASL 74 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHH
Confidence 4588889 4899999999999999999999998865 344432 2467889999999877654
No 246
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=83.96 E-value=1.3 Score=47.10 Aligned_cols=73 Identities=10% Similarity=0.075 Sum_probs=53.9
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-------------CCCCEEEccCCCHHHHHhcC--c--
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-------------LDLPVYFGDAGSREVLHKVG--A-- 1071 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-------------~g~~vi~GDasd~e~L~~Ag--I-- 1071 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++++..+...+ ..+.++.+|.+|++.++++= +
T Consensus 8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQA 87 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 45777764 679999999999999999999999887654422 34678899999998876541 1
Q ss_pred --ccc-CEEEEecC
Q 001096 1072 --ERA-CAAAITLD 1082 (1158)
Q Consensus 1072 --~~A-~~VIi~t~ 1082 (1158)
.+. |+||-..+
T Consensus 88 ~~g~i~d~vi~~Ag 101 (264)
T 2pd6_A 88 CFSRPPSVVVSCAG 101 (264)
T ss_dssp HHSSCCSEEEECCC
T ss_pred HhCCCCeEEEECCC
Confidence 123 77776543
No 247
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=83.80 E-value=3.8 Score=39.29 Aligned_cols=102 Identities=13% Similarity=0.101 Sum_probs=64.4
Q ss_pred CCCEEEEeCCchHHHHh----hh-CCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEE
Q 001096 1032 LIPFVALDVRSDRVAIG----RA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFV 1105 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l----~~-~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIa 1105 (1158)
...|+++|.|+...+.+ .+ .|+.++.--.+-.+.++.+.-...+.+++-..-+. .-+.++..+|+.+|.++||+
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 84 (153)
T 3cz5_A 5 TARIMLVDDHPIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILI 84 (153)
T ss_dssp CEEEEEECSCHHHHHHHHHHHTTSTTEEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEE
T ss_pred ccEEEEECCcHHHHHHHHHHHhhCCCcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEE
Confidence 34677888777655433 33 45555422222244455544456788877665443 34677888999999988888
Q ss_pred EecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1106 RAHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1106 ra~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.+... +......++|++.++........
T Consensus 85 ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~ 114 (153)
T 3cz5_A 85 FTMHQGSAFALKAFEAGASGYVTKSSDPAE 114 (153)
T ss_dssp EESCCSHHHHHHHHHTTCSEEEETTSCTTH
T ss_pred EECCCCHHHHHHHHHCCCcEEEecCCCHHH
Confidence 77654 56667788999988766544433
No 248
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=83.80 E-value=0.77 Score=53.30 Aligned_cols=100 Identities=13% Similarity=0.014 Sum_probs=67.3
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCC-------------CHH-------HHHh
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAG-------------SRE-------VLHK 1068 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDas-------------d~e-------~L~~ 1068 (1158)
...++|+|.|.+|..+++.+...|.+|+++|.++++.+.+.+.|..++.-|.. +.+ .+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e 251 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAA 251 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHH
Confidence 45799999999999999999999999999999999888787777665432221 121 2322
Q ss_pred cCccccCEEEEecCCc---hhhHHHHHHHHhhCCCceEEEEecC
Q 001096 1069 VGAERACAAAITLDTP---GANYRTVWALSKYFPNVKTFVRAHD 1109 (1158)
Q Consensus 1069 AgI~~A~~VIi~t~dd---~~Nl~i~l~ar~l~p~~~IIara~d 1109 (1158)
+ +..+|+||.++.-+ ...+.....++...|...|+-.+.+
T Consensus 252 ~-~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~ 294 (401)
T 1x13_A 252 Q-AKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQ 294 (401)
T ss_dssp H-HHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred H-hCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCC
Confidence 2 24699998884221 2222233456667777666666543
No 249
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=83.72 E-value=0.83 Score=49.65 Aligned_cols=71 Identities=11% Similarity=0.053 Sum_probs=53.6
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh----C---CCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA----L---DLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~----~---g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.|. |.+|..+++.|.++|+.|++++++++..+.+.+ . ...++.+|.+|++.++++= ..+.|
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD 108 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD 108 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 45788886 679999999999999999999999887655422 1 3567889999988775531 12577
Q ss_pred EEEEe
Q 001096 1076 AAAIT 1080 (1158)
Q Consensus 1076 ~VIi~ 1080 (1158)
.+|-.
T Consensus 109 ~li~n 113 (286)
T 1xu9_A 109 MLILN 113 (286)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 77744
No 250
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=83.69 E-value=0.89 Score=48.17 Aligned_cols=73 Identities=16% Similarity=0.080 Sum_probs=54.9
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+...+ .+..++.+|.+|++.++++= ..+.|.+|-
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvn 83 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLH 83 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 45777775 569999999999999999999999887765532 25778899999998765431 125677776
Q ss_pred ecC
Q 001096 1080 TLD 1082 (1158)
Q Consensus 1080 ~t~ 1082 (1158)
..+
T Consensus 84 nAg 86 (235)
T 3l6e_A 84 CAG 86 (235)
T ss_dssp ECC
T ss_pred CCC
Confidence 543
No 251
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=83.68 E-value=0.61 Score=47.18 Aligned_cols=33 Identities=24% Similarity=0.189 Sum_probs=30.8
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCch
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSD 1043 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~ 1043 (1158)
.|+|+|.|+.|..+|..|.+.|++|+|+|+++.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 489999999999999999999999999998754
No 252
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=83.62 E-value=3.2 Score=46.95 Aligned_cols=124 Identities=13% Similarity=0.184 Sum_probs=79.9
Q ss_pred ccccccCCcccHHHHHHHHhhC-CCCEE-EEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~-g~~Vv-VID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N 1087 (1158)
-++.|+|.|.+|+..++.|.+. +.+++ +.|.++++.+.+...|.+++ +|.+.+.+- .+.|+|+++++++..
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~----~~~~~ll~~--~~~D~V~i~tp~~~h- 78 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIY----ESYEAVLAD--EKVDAVLIATPNDSH- 78 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBC----SCHHHHHHC--TTCCEEEECSCGGGH-
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCcee----CCHHHHhcC--CCCCEEEEcCCcHHH-
Confidence 4688999999999999999876 56766 56999998877766776532 455544432 368999999988743
Q ss_pred HHHHHHHHhhCCCceEEEE---ecChhhHHHH----HHCCCCeeecC--CcHHHHHHHHHHHHh
Q 001096 1088 YRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVPE--TLEPSLQLAAAVLAQ 1142 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~IIar---a~d~e~~~~L----~~aGAd~VI~p--~~~a~~~LA~~vl~~ 1142 (1158)
...+..+-+.+ ..|++. +.+.+..+.+ ++.|....+.. ...+...-++.++..
T Consensus 79 ~~~~~~al~aG--khVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~ 140 (359)
T 3e18_A 79 KELAISALEAG--KHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQ 140 (359)
T ss_dssp HHHHHHHHHTT--CEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--CCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHc
Confidence 33344444443 467764 4555555544 45676554432 334555556665554
No 253
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=83.60 E-value=4.7 Score=38.55 Aligned_cols=101 Identities=13% Similarity=0.040 Sum_probs=60.3
Q ss_pred CCEEEEeCCchHHHHh----hhCCCCEEEccCCC-HHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEE
Q 001096 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGS-REVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~~~g~~vi~GDasd-~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIar 1106 (1158)
..|.++|.|+...+.+ .+.|...+.+-..+ .+.++.+.-...+.+++-..-+. .-+.++..+|+.+|+++||+.
T Consensus 16 ~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~ 95 (152)
T 3eul_A 16 VRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLI 95 (152)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHSSEEEEEEESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEE
T ss_pred EEEEEEcCCHHHHHHHHHHHhhCCCeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEE
Confidence 3455555555443322 22343222222222 23344433346788877765443 346788889999999998888
Q ss_pred ecChh--hHHHHHHCCCCeeecCCcHHHH
Q 001096 1107 AHDID--HGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1107 a~d~e--~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+...+ ......++|++.++........
T Consensus 96 s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~ 124 (152)
T 3eul_A 96 SAHDEPAIVYQALQQGAAGFLLKDSTRTE 124 (152)
T ss_dssp ESCCCHHHHHHHHHTTCSEEEETTCCHHH
T ss_pred EccCCHHHHHHHHHcCCCEEEecCCCHHH
Confidence 77654 5556788999988877665544
No 254
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=83.53 E-value=0.65 Score=52.33 Aligned_cols=73 Identities=12% Similarity=0.083 Sum_probs=54.7
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchH-----HHHhhh------C-CCCEEEccCCCHHHHHhcCcc-ccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDR-----VAIGRA------L-DLPVYFGDAGSREVLHKVGAE-RAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~-----v~~l~~------~-g~~vi~GDasd~e~L~~AgI~-~A~ 1075 (1158)
+.++|.|. |-+|..+++.|.+.|++|++++++++. .+.+.. . ++.++.||.+|++.+.++=-. +.|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 56888887 899999999999999999999988654 222211 1 677889999999888765211 468
Q ss_pred EEEEecC
Q 001096 1076 AAAITLD 1082 (1158)
Q Consensus 1076 ~VIi~t~ 1082 (1158)
+||-+..
T Consensus 109 ~Vih~A~ 115 (381)
T 1n7h_A 109 EVYNLAA 115 (381)
T ss_dssp EEEECCS
T ss_pred EEEECCc
Confidence 8887664
No 255
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=83.51 E-value=1.1 Score=52.65 Aligned_cols=71 Identities=24% Similarity=0.198 Sum_probs=50.9
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHh------------cCccccCEEE
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHK------------VGAERACAAA 1078 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~------------AgI~~A~~VI 1078 (1158)
.+.|+|.|.+|..++..|.+ |++|+++|.|+++++.+.+...++.. +.-++.+.+ .-+.+||.||
T Consensus 38 kIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e--~~l~~ll~~~~~~l~~ttd~~ea~~~aDvVi 114 (432)
T 3pid_A 38 KITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVD--KEIQEYLAEKPLNFRATTDKHDAYRNADYVI 114 (432)
T ss_dssp EEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCC--HHHHHHHHHSCCCEEEESCHHHHHTTCSEEE
T ss_pred EEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCcccc--ccHHHHHhhccCCeEEEcCHHHHHhCCCEEE
Confidence 58899999999999999988 99999999999999988764322210 000011110 1135789999
Q ss_pred EecCCc
Q 001096 1079 ITLDTP 1084 (1158)
Q Consensus 1079 i~t~dd 1084 (1158)
++++++
T Consensus 115 iaVPt~ 120 (432)
T 3pid_A 115 IATPTD 120 (432)
T ss_dssp ECCCCE
T ss_pred EeCCCc
Confidence 999886
No 256
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=83.46 E-value=1.2 Score=46.71 Aligned_cols=72 Identities=10% Similarity=0.066 Sum_probs=55.0
Q ss_pred ccccccCC-cccHHHHHHHHhhCC--CCEEEEeCCchHHHHhhhC---CCCEEEccCCCHHHHHhcCc--------cccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERL--IPFVALDVRSDRVAIGRAL---DLPVYFGDAGSREVLHKVGA--------ERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g--~~VvVID~d~~~v~~l~~~---g~~vi~GDasd~e~L~~AgI--------~~A~ 1075 (1158)
+.++|.|. |.+|+.+++.|.++| +.|++++++++..+.+.+. .+.++.+|.+|++.++++-- .+.|
T Consensus 4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id 83 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLS 83 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCC
T ss_pred CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCc
Confidence 35677764 679999999999999 9999999998877666543 56788999999988765411 1578
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
++|-..
T Consensus 84 ~li~~A 89 (250)
T 1yo6_A 84 LLINNA 89 (250)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 877654
No 257
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=83.43 E-value=4.3 Score=41.97 Aligned_cols=103 Identities=15% Similarity=0.061 Sum_probs=64.8
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC--------CCCEEEccCCCHHHHHhcCccccCEEEEec
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL--------DLPVYFGDAGSREVLHKVGAERACAAAITL 1081 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~--------g~~vi~GDasd~e~L~~AgI~~A~~VIi~t 1081 (1158)
..++-+|.|. |.......+ .+..|+.+|.+++.++.+++. ++.++.||..+. +.. ....|.|++..
T Consensus 57 ~~vLDlGcG~-G~~~~~la~-~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~--~~~--~~~~D~v~~~~ 130 (204)
T 3njr_A 57 ELLWDIGGGS-GSVSVEWCL-AGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA--LAD--LPLPEAVFIGG 130 (204)
T ss_dssp CEEEEETCTT-CHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG--GTT--SCCCSEEEECS
T ss_pred CEEEEecCCC-CHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh--ccc--CCCCCEEEECC
Confidence 3456666554 433333322 288999999999988766432 467889998762 222 24688887655
Q ss_pred CCchhhHHHHHHHHhhCCCceEEEEecChhhHH----HHHHCC
Q 001096 1082 DTPGANYRTVWALSKYFPNVKTFVRAHDIDHGL----NLEKAG 1120 (1158)
Q Consensus 1082 ~dd~~Nl~i~l~ar~l~p~~~IIara~d~e~~~----~L~~aG 1120 (1158)
..+.. .+....+.+.|+-++++...+.+... .+++.|
T Consensus 131 ~~~~~--~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g 171 (204)
T 3njr_A 131 GGSQA--LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHG 171 (204)
T ss_dssp CCCHH--HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred cccHH--HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCC
Confidence 43322 55666677888888888877665443 344555
No 258
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=83.30 E-value=2.1 Score=48.38 Aligned_cols=86 Identities=13% Similarity=0.060 Sum_probs=56.7
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh--
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-- 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N-- 1087 (1158)
..+.|+|+|.+|+.+++.|+..|.+|++.|+++...+...+.|... .+.+.+ +.++|+|++.++....+
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-----~~l~el----l~~aDvV~l~~P~t~~t~~ 216 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQ-----VACSEL----FASSDFILLALPLNADTLH 216 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEE-----CCHHHH----HHHCSEEEECCCCSTTTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCcee-----CCHHHH----HhhCCEEEEcCCCCHHHHH
Confidence 4588999999999999999999999999999875444444445421 233332 24688999988754322
Q ss_pred HHHHHHHHhhCCCceEE
Q 001096 1088 YRTVWALSKYFPNVKTF 1104 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~II 1104 (1158)
+.-...+....|...+|
T Consensus 217 li~~~~l~~mk~gailI 233 (330)
T 4e5n_A 217 LVNAELLALVRPGALLV 233 (330)
T ss_dssp CBCHHHHTTSCTTEEEE
T ss_pred HhCHHHHhhCCCCcEEE
Confidence 22223444555554443
No 259
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=83.27 E-value=6.3 Score=36.80 Aligned_cols=58 Identities=7% Similarity=0.064 Sum_probs=39.8
Q ss_pred cccCEEEEecCCchhhHHHHHHHHhhCC-CceEEEEecCh--hhHHHHHHCCCCeeecCCc-HHHH
Q 001096 1072 ERACAAAITLDTPGANYRTVWALSKYFP-NVKTFVRAHDI--DHGLNLEKAGATAVVPETL-EPSL 1133 (1158)
Q Consensus 1072 ~~A~~VIi~t~dd~~Nl~i~l~ar~l~p-~~~IIara~d~--e~~~~L~~aGAd~VI~p~~-~a~~ 1133 (1158)
...+.++ .++ ..-+.++..+|+. | .++||+.+... +......++|++.++.... ....
T Consensus 61 ~~~dlvi--~~~-~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~~ 122 (137)
T 2pln_A 61 RNYDLVM--VSD-KNALSFVSRIKEK-HSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKA 122 (137)
T ss_dssp SCCSEEE--ECS-TTHHHHHHHHHHH-STTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSCHHH
T ss_pred CCCCEEE--EcC-ccHHHHHHHHHhc-CCCccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCCHHH
Confidence 3567766 333 2346677788887 7 88888887654 5667778899998887665 4433
No 260
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=83.24 E-value=1.4 Score=47.15 Aligned_cols=72 Identities=14% Similarity=-0.002 Sum_probs=52.8
Q ss_pred ccccccCC---cccHHHHHHHHhhCCCCEEEEeCCc---hHHHHhhh--CCCCEEEccCCCHHHHHhc------CccccC
Q 001096 1010 DHIILCGF---GRVGQIIAQLLSERLIPFVALDVRS---DRVAIGRA--LDLPVYFGDAGSREVLHKV------GAERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~---G~vG~~Ia~~L~e~g~~VvVID~d~---~~v~~l~~--~g~~vi~GDasd~e~L~~A------gI~~A~ 1075 (1158)
+.++|.|. +-+|+.+++.|.++|++|+++++++ +..+.+.+ .+..++.+|.+|++.++++ ...+.|
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 89 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFD 89 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 45888887 5899999999999999999999987 34444432 1347889999999877643 112567
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
++|-..
T Consensus 90 ~lv~~A 95 (265)
T 1qsg_A 90 GFVHSI 95 (265)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 766644
No 261
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=83.20 E-value=1.6 Score=47.08 Aligned_cols=72 Identities=14% Similarity=-0.010 Sum_probs=53.6
Q ss_pred ccccccCC---cccHHHHHHHHhhCCCCEEEEeCCch---HHHHhhh--CCCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCGF---GRVGQIIAQLLSERLIPFVALDVRSD---RVAIGRA--LDLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~---G~vG~~Ia~~L~e~g~~VvVID~d~~---~v~~l~~--~g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.|. +.+|+.+++.|.++|.+|++++++++ ..+.+.+ .+..++.+|.+|++.++++= ..+.|
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 86 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLD 86 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEE
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46888887 58999999999999999999999875 3444432 23788999999998776541 12456
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
++|-..
T Consensus 87 ~lv~nA 92 (275)
T 2pd4_A 87 FIVHSV 92 (275)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 766544
No 262
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=83.18 E-value=1.3 Score=52.24 Aligned_cols=73 Identities=26% Similarity=0.377 Sum_probs=51.6
Q ss_pred cccccCCcccHHHHHHHHhhC--CCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHh-------------cCccccC
Q 001096 1011 HIILCGFGRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHK-------------VGAERAC 1075 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~--g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~-------------AgI~~A~ 1075 (1158)
++.|+|.|.+|..++..|.+. |++|+++|.++++++.+++.+.++.. +.-.+.+.+ .-++++|
T Consensus 7 kI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e--~~l~~~~~~~~~~~~~~t~~~~e~~~~aD 84 (467)
T 2q3e_A 7 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYE--PGLKEVVESCRGKNLFFSTNIDDAIKEAD 84 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCC--TTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCC--CCHHHHHHHhhcCCEEEECCHHHHHhcCC
Confidence 588999999999999999998 89999999999999887654433221 110111110 0134689
Q ss_pred EEEEecCCch
Q 001096 1076 AAAITLDTPG 1085 (1158)
Q Consensus 1076 ~VIi~t~dd~ 1085 (1158)
.|+++++++.
T Consensus 85 vViiaVptp~ 94 (467)
T 2q3e_A 85 LVFISVNTPT 94 (467)
T ss_dssp EEEECCCCCB
T ss_pred EEEEEcCCch
Confidence 9999987653
No 263
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=83.14 E-value=0.46 Score=53.81 Aligned_cols=68 Identities=16% Similarity=0.195 Sum_probs=51.1
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCC------------CEEEccCCCHHHHHhcCccccCEEE
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDL------------PVYFGDAGSREVLHKVGAERACAAA 1078 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~------------~vi~GDasd~e~L~~AgI~~A~~VI 1078 (1158)
++.|+|.|.+|..++..|.+.|++|+++|.++++.+.+.+.+. .+..- .+++.. ++++|+||
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~aDvVi 90 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFT--SDVEKA----YNGAEIIL 90 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEE--SCHHHH----HTTCSSEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeee--CCHHHH----HcCCCEEE
Confidence 6999999999999999999999999999999998887765431 11111 222211 34789999
Q ss_pred EecCCc
Q 001096 1079 ITLDTP 1084 (1158)
Q Consensus 1079 i~t~dd 1084 (1158)
+++.+.
T Consensus 91 lav~~~ 96 (366)
T 1evy_A 91 FVIPTQ 96 (366)
T ss_dssp ECCCHH
T ss_pred ECCChH
Confidence 999864
No 264
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=83.11 E-value=3.2 Score=46.16 Aligned_cols=101 Identities=21% Similarity=0.069 Sum_probs=65.9
Q ss_pred cccccCCcccHHHHHHHHhhC--CCCEEEEeCCchHHHHhh---hCC-------CCEEEccCCCHHHHHhcCccccCEEE
Q 001096 1011 HIILCGFGRVGQIIAQLLSER--LIPFVALDVRSDRVAIGR---ALD-------LPVYFGDAGSREVLHKVGAERACAAA 1078 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~--g~~VvVID~d~~~v~~l~---~~g-------~~vi~GDasd~e~L~~AgI~~A~~VI 1078 (1158)
++.|+|.|.+|..++..|... +++|+++|.|+++.+... ..+ ..+..- +| ++ . +++||.||
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~~-~-l~~aDvVi 74 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND---YA-D-TANSDIVI 74 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC---GG-G-GTTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CC---HH-H-HCCCCEEE
Confidence 477999999999999999874 789999999998776432 111 112210 12 12 2 67899999
Q ss_pred EecCCch-----------hhH----HHHHHHHhhCCCceEEEEecChhh-HHHHHH
Q 001096 1079 ITLDTPG-----------ANY----RTVWALSKYFPNVKTFVRAHDIDH-GLNLEK 1118 (1158)
Q Consensus 1079 i~t~dd~-----------~Nl----~i~l~ar~l~p~~~IIara~d~e~-~~~L~~ 1118 (1158)
++.+.+. .|. .++..+++..|+..+++..+-.+. ...+.+
T Consensus 75 iav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~~~~~~~~~~ 130 (310)
T 1guz_A 75 ITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVAWV 130 (310)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHHHHHHHHHH
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCchHHHHHHHHH
Confidence 9996541 343 344556667888877776554443 334444
No 265
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=83.05 E-value=1.8 Score=50.93 Aligned_cols=74 Identities=23% Similarity=0.354 Sum_probs=52.7
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHh--------------cCccccC
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHK--------------VGAERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~--------------AgI~~A~ 1075 (1158)
-++-++|.|.+|..++..|.+.|++|+++|.|+++++.+.+...+.+ ++.-.+.+++ .-+++|+
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~--epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIY--EPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSC--CTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCcc--CCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 45788999999999999999999999999999999998876322221 1111111110 1135789
Q ss_pred EEEEecCCch
Q 001096 1076 AAAITLDTPG 1085 (1158)
Q Consensus 1076 ~VIi~t~dd~ 1085 (1158)
.+|++.+++.
T Consensus 87 vvii~Vptp~ 96 (446)
T 4a7p_A 87 AVFIAVGTPS 96 (446)
T ss_dssp EEEECCCCCB
T ss_pred EEEEEcCCCC
Confidence 9999976653
No 266
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=83.04 E-value=1.4 Score=46.33 Aligned_cols=73 Identities=14% Similarity=0.032 Sum_probs=55.0
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-----CCCCEEEccCCCHHHHHhcC------ccccCEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----LDLPVYFGDAGSREVLHKVG------AERACAA 1077 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-----~g~~vi~GDasd~e~L~~Ag------I~~A~~V 1077 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++++..+...+ .++.++.+|.+|++.++++= ..+.|.+
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 86 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL 86 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 45777764 679999999999999999999999877654422 35678899999998876542 1257887
Q ss_pred EEecC
Q 001096 1078 AITLD 1082 (1158)
Q Consensus 1078 Ii~t~ 1082 (1158)
|-...
T Consensus 87 i~~Ag 91 (251)
T 1zk4_A 87 VNNAG 91 (251)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 76553
No 267
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=82.98 E-value=3.9 Score=45.67 Aligned_cols=126 Identities=15% Similarity=0.132 Sum_probs=75.5
Q ss_pred cccccCC-cccHHHHHHHHhhCCC-------CEEEEeCCc--hHHH----HhhhCCCCEEEccCCCHHHHHhcCccccCE
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERLI-------PFVALDVRS--DRVA----IGRALDLPVYFGDAGSREVLHKVGAERACA 1076 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g~-------~VvVID~d~--~~v~----~l~~~g~~vi~GDasd~e~L~~AgI~~A~~ 1076 (1158)
+++|+|. |.+|..++..|...|+ +++++|.++ ++.+ .+.+..++++ +|..+...+.++ ++++|+
T Consensus 6 kVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a-~~~~D~ 83 (327)
T 1y7t_A 6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVA-FKDADY 83 (327)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHH-TTTCSE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHH-hCCCCE
Confidence 5899997 9999999999998886 899999875 2221 2233234444 676654434333 357999
Q ss_pred EEEecCCc-----------hhhHHH----HHHHHhhC-CCceEEEEecChh-hHHHHHHC--C--CCeeecCCcHHHHHH
Q 001096 1077 AAITLDTP-----------GANYRT----VWALSKYF-PNVKTFVRAHDID-HGLNLEKA--G--ATAVVPETLEPSLQL 1135 (1158)
Q Consensus 1077 VIi~t~dd-----------~~Nl~i----~l~ar~l~-p~~~IIara~d~e-~~~~L~~a--G--Ad~VI~p~~~a~~~L 1135 (1158)
||.+.... ..|+.. +..+++.. |+.++++-.+..+ ......+. + ...++--....++.+
T Consensus 84 Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~er~ 163 (327)
T 1y7t_A 84 ALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRA 163 (327)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHH
T ss_pred EEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHHHHH
Confidence 98876432 245544 45677776 8777766554432 22333332 1 334454455555554
Q ss_pred HHH
Q 001096 1136 AAA 1138 (1158)
Q Consensus 1136 A~~ 1138 (1158)
.+.
T Consensus 164 ~~~ 166 (327)
T 1y7t_A 164 KAQ 166 (327)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 268
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=82.97 E-value=0.35 Score=51.76 Aligned_cols=68 Identities=13% Similarity=0.104 Sum_probs=54.7
Q ss_pred cccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecC
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
.++|.|. |.+|..+++.|.+.|++|++++++++.. ...+..++.+|.+|++.++++ +++.|+||-+..
T Consensus 4 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~a~ 72 (267)
T 3ay3_A 4 RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA---AEAHEEIVACDLADAQAVHDL-VKDCDGIIHLGG 72 (267)
T ss_dssp EEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC---CCTTEEECCCCTTCHHHHHHH-HTTCSEEEECCS
T ss_pred eEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc---cCCCccEEEccCCCHHHHHHH-HcCCCEEEECCc
Confidence 5788886 9999999999999999999999887531 123567888999999988776 356899887653
No 269
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=82.84 E-value=3.6 Score=39.01 Aligned_cols=62 Identities=21% Similarity=0.227 Sum_probs=44.9
Q ss_pred cccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEEecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1072 ERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRAHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1072 ~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIara~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
...++||+-..-+. .-+.++..+|+.+|+++||+.+... +......++|++.++........
T Consensus 66 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~ 130 (146)
T 4dad_A 66 DAFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRA 130 (146)
T ss_dssp TTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHH
T ss_pred CCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHH
Confidence 46788877776544 3456788889999999988887654 45666778999988776655544
No 270
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=82.83 E-value=0.54 Score=48.13 Aligned_cols=67 Identities=15% Similarity=0.073 Sum_probs=54.7
Q ss_pred ccccccC-CcccHHHHHHHHhhCCC--CEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLI--PFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
.+++|.| .|.+|+.+++.|.++|. +|++++++++. ...++.++.+|.+|++.++++- .|.||-+...
T Consensus 6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~---~d~vi~~a~~ 75 (215)
T 2a35_A 6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGS---IDTAFCCLGT 75 (215)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC---CSEEEECCCC
T ss_pred ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhh---hcEEEECeee
Confidence 4688888 68999999999999998 99999998775 2346677889999998887765 8888887653
No 271
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=82.76 E-value=0.48 Score=52.77 Aligned_cols=55 Identities=18% Similarity=0.350 Sum_probs=45.0
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCcc
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAE 1072 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~ 1072 (1158)
.|+|+|.|..|..+|..|.+.|++|+++|+.++ .|.+..+|+...+..|+++++.
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~-------~~~~~~~g~~l~~~~l~~l~~~ 60 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE-------IGSPVRCGEGLSKGILNEADIK 60 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS-------TTCSCCSCCEEETHHHHHTTCC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC-------CCCCCceecccCHHHHHHcCCC
Confidence 489999999999999999999999999998653 2444555666677888888765
No 272
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=82.76 E-value=1.2 Score=47.52 Aligned_cols=71 Identities=13% Similarity=0.095 Sum_probs=54.2
Q ss_pred cccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhc------CccccCEEEEe
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKV------GAERACAAAIT 1080 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~A------gI~~A~~VIi~ 1080 (1158)
.++|.|. +-+|+.+++.|.++|.+|++++++++..+.+.+ ....++.+|.+|++.++++ ...+.|.+|-.
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn 81 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN 81 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEEC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 3567764 679999999999999999999999887765533 2467788999999887654 12357787764
Q ss_pred c
Q 001096 1081 L 1081 (1158)
Q Consensus 1081 t 1081 (1158)
.
T Consensus 82 A 82 (248)
T 3asu_A 82 A 82 (248)
T ss_dssp C
T ss_pred C
Confidence 3
No 273
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=82.74 E-value=3 Score=46.80 Aligned_cols=85 Identities=14% Similarity=0.109 Sum_probs=56.2
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
...+-|+|+|.+|+.+++.|+..|.+|++.|++++.. .+.....+. ..|+++ +.++|.|++.++....+.
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~-----~~~~~~~~~----~~l~el-l~~aDiV~l~~Plt~~t~ 208 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSW-----PGVESYVGR----EELRAF-LNQTRVLINLLPNTAQTV 208 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCC-----TTCEEEESH----HHHHHH-HHTCSEEEECCCCCGGGT
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhh-----hhhhhhccc----CCHHHH-HhhCCEEEEecCCchhhh
Confidence 3468899999999999999999999999999887642 233333332 334333 457899999987553332
Q ss_pred HH--HHHHHhhCCCceE
Q 001096 1089 RT--VWALSKYFPNVKT 1103 (1158)
Q Consensus 1089 ~i--~l~ar~l~p~~~I 1103 (1158)
.+ ...+....|...+
T Consensus 209 ~li~~~~l~~mk~gail 225 (315)
T 3pp8_A 209 GIINSELLDQLPDGAYV 225 (315)
T ss_dssp TCBSHHHHTTSCTTEEE
T ss_pred hhccHHHHhhCCCCCEE
Confidence 22 3334445555333
No 274
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=82.65 E-value=10 Score=34.94 Aligned_cols=100 Identities=13% Similarity=0.088 Sum_probs=65.0
Q ss_pred CCEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh-HHHHHHHHhh--CCCceEEE
Q 001096 1033 IPFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-YRTVWALSKY--FPNVKTFV 1105 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N-l~i~l~ar~l--~p~~~IIa 1105 (1158)
..|.++|.|+...+. +...|+.++.. .+-.+.++.+.-.+.+.+++-..-+..| +.++..+|+. .++++||+
T Consensus 3 ~~ILivdd~~~~~~~l~~~l~~~g~~v~~~-~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~ 81 (122)
T 3gl9_A 3 KKVLLVDDSAVLRKIVSFNLKKEGYEVIEA-ENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIV 81 (122)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEE-SSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEE
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCCcEEEEe-CCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEE
Confidence 357777777765433 34557766643 2334566666666788888876655444 5566677665 46788877
Q ss_pred EecC--hhhHHHHHHCCCCeeecCCcHHHH
Q 001096 1106 RAHD--IDHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1106 ra~d--~e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.+.. .+......++|++..+........
T Consensus 82 ~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~ 111 (122)
T 3gl9_A 82 LTAKGGEEDESLALSLGARKVMRKPFSPSQ 111 (122)
T ss_dssp EESCCSHHHHHHHHHTTCSEEEESSCCHHH
T ss_pred EecCCchHHHHHHHhcChhhhccCCCCHHH
Confidence 7754 456677789999988876665554
No 275
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=82.53 E-value=1.9 Score=46.72 Aligned_cols=72 Identities=11% Similarity=-0.026 Sum_probs=53.8
Q ss_pred ccccccCC---cccHHHHHHHHhhCCCCEEEEeCCch---HHHHhhh--CCCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCGF---GRVGQIIAQLLSERLIPFVALDVRSD---RVAIGRA--LDLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~---G~vG~~Ia~~L~e~g~~VvVID~d~~---~v~~l~~--~g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.|. +.+|..+++.|.++|.+|++++++++ ..+.+.+ .+..++.+|.+|++.++++= ..+.|
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 101 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLD 101 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCCC
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46888887 58999999999999999999999875 3333332 23678899999998776541 12567
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
++|-..
T Consensus 102 ~lv~~A 107 (285)
T 2p91_A 102 IIVHSI 107 (285)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 777654
No 276
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=82.52 E-value=1.2 Score=48.31 Aligned_cols=68 Identities=21% Similarity=0.141 Sum_probs=51.5
Q ss_pred ccccCC-cccHHHHHHHHhhCC-CCEEEEeCCchHH--HHhhhCCCCEEEccCCCHHHHHhcCcc----ccCEEEEecC
Q 001096 1012 IILCGF-GRVGQIIAQLLSERL-IPFVALDVRSDRV--AIGRALDLPVYFGDAGSREVLHKVGAE----RACAAAITLD 1082 (1158)
Q Consensus 1012 vVIiG~-G~vG~~Ia~~L~e~g-~~VvVID~d~~~v--~~l~~~g~~vi~GDasd~e~L~~AgI~----~A~~VIi~t~ 1082 (1158)
++|.|. |.+|..+++.|.+.| ++|+++++++... ..+. +.. +.||.++++.++++--. +.|+||-+..
T Consensus 2 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~ 77 (310)
T 1eq2_A 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 77 (310)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH--TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred EEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC--cce-eccccccHHHHHHHHhccccCCCcEEEECcc
Confidence 677776 899999999999999 9999999876542 2222 333 77999999988776322 5888887654
No 277
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=82.52 E-value=4.6 Score=45.93 Aligned_cols=85 Identities=12% Similarity=-0.012 Sum_probs=57.2
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH-
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY- 1088 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl- 1088 (1158)
..+-|+|+|++|+.+++.|+..|.+|++.|+++...+... |.... .+.+.+ +.++|.|++.++....+.
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~----~~l~el----l~~sDvV~l~~Plt~~T~~ 243 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYH----DTLDSL----LGASDIFLIAAPGRPELKG 243 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEEC----SSHHHH----HHTCSEEEECSCCCGGGTT
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEe----CCHHHH----HhhCCEEEEecCCCHHHHH
Confidence 4688999999999999999999999999999865443322 43221 244333 347899999998654332
Q ss_pred -HHHHHHHhhCCCceEE
Q 001096 1089 -RTVWALSKYFPNVKTF 1104 (1158)
Q Consensus 1089 -~i~l~ar~l~p~~~II 1104 (1158)
.-...+....|...+|
T Consensus 244 li~~~~l~~mk~gailI 260 (345)
T 4g2n_A 244 FLDHDRIAKIPEGAVVI 260 (345)
T ss_dssp CBCHHHHHHSCTTEEEE
T ss_pred HhCHHHHhhCCCCcEEE
Confidence 2234455566654443
No 278
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=82.40 E-value=1.6 Score=46.82 Aligned_cols=72 Identities=13% Similarity=-0.011 Sum_probs=53.3
Q ss_pred ccccccCC---cccHHHHHHHHhhCCCCEEEEeCCch---HHHHhhh--CCCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCGF---GRVGQIIAQLLSERLIPFVALDVRSD---RVAIGRA--LDLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~---G~vG~~Ia~~L~e~g~~VvVID~d~~---~v~~l~~--~g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.|. +.+|+.+++.|.++|.+|++++++++ ..+.+.+ .+..++.+|.+|++.++++= ..+.|
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 88 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLD 88 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 45888897 58999999999999999999999875 3343332 23678889999998876541 12457
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
++|-..
T Consensus 89 ~lv~~A 94 (261)
T 2wyu_A 89 YLVHAI 94 (261)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 766654
No 279
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=82.39 E-value=1.3 Score=49.91 Aligned_cols=85 Identities=15% Similarity=0.123 Sum_probs=57.6
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh--
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-- 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N-- 1087 (1158)
..+.|+|+|.+|+.+++.|...|.+|+++|.+++. +...+.|... .+.+.+ +.++|.|++.++.....
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-----~~l~~~----l~~aDvVil~vp~~~~t~~ 220 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF-----KPLEDL----LRESDFVVLAVPLTRETYH 220 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE-----CCHHHH----HHHCSEEEECCCCCTTTTT
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc-----CCHHHH----HhhCCEEEECCCCChHHHH
Confidence 35889999999999999999999999999999877 5444445432 233322 24689999999776432
Q ss_pred HHHHHHHHhhCCCceEE
Q 001096 1088 YRTVWALSKYFPNVKTF 1104 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~II 1104 (1158)
+.-........|+..+|
T Consensus 221 ~i~~~~~~~mk~~ailI 237 (334)
T 2dbq_A 221 LINEERLKLMKKTAILI 237 (334)
T ss_dssp CBCHHHHHHSCTTCEEE
T ss_pred hhCHHHHhcCCCCcEEE
Confidence 21122344455554443
No 280
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=82.33 E-value=0.72 Score=50.74 Aligned_cols=73 Identities=16% Similarity=0.115 Sum_probs=54.6
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHH--HHhhh----CCCCEEEccCCCHHHHHhcCcc-ccCEEEEec
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRV--AIGRA----LDLPVYFGDAGSREVLHKVGAE-RACAAAITL 1081 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v--~~l~~----~g~~vi~GDasd~e~L~~AgI~-~A~~VIi~t 1081 (1158)
..++|.|. |-+|..+++.|.+.|++|++++++++.. ..+.. .++.++.||.+|++.++++=-+ +.|+||-+.
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 83 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLA 83 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEECC
Confidence 35788886 8999999999999999999999987542 12222 2567888999999888765211 358887765
Q ss_pred C
Q 001096 1082 D 1082 (1158)
Q Consensus 1082 ~ 1082 (1158)
.
T Consensus 84 ~ 84 (345)
T 2z1m_A 84 A 84 (345)
T ss_dssp C
T ss_pred C
Confidence 4
No 281
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=82.29 E-value=0.75 Score=49.86 Aligned_cols=70 Identities=20% Similarity=0.173 Sum_probs=54.5
Q ss_pred ccccccCCc-ccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhc--CccccCEEEE
Q 001096 1010 DHIILCGFG-RVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKV--GAERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~G-~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~A--gI~~A~~VIi 1079 (1158)
+.++|.|.+ -+|+.+++.|.+.|.+|++.|.|++..+.........+..|.+|++..+++ .+.+.|.+|-
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVN 84 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVN 84 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 345666654 599999999999999999999999887766666778889999999887654 2346677654
No 282
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=82.27 E-value=0.96 Score=47.75 Aligned_cols=73 Identities=12% Similarity=0.113 Sum_probs=54.2
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCC-chHHHHh----hhC--CCCEEEccCCCHHHHHhcCc------cccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVR-SDRVAIG----RAL--DLPVYFGDAGSREVLHKVGA------ERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d-~~~v~~l----~~~--g~~vi~GDasd~e~L~~AgI------~~A~ 1075 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++ ++..+.+ +.. .+.++.+|.+|++.++++=- .+.|
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID 87 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 35777775 779999999999999999999998 6655433 222 46678899999988765421 2678
Q ss_pred EEEEecC
Q 001096 1076 AAAITLD 1082 (1158)
Q Consensus 1076 ~VIi~t~ 1082 (1158)
+||-...
T Consensus 88 ~vi~~Ag 94 (258)
T 3afn_B 88 VLINNAG 94 (258)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8876554
No 283
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=82.19 E-value=2.9 Score=46.90 Aligned_cols=90 Identities=21% Similarity=0.244 Sum_probs=62.5
Q ss_pred cccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHH----Hhhh------CCCCEE-EccCCCHHHHHhcCccccCEE
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVA----IGRA------LDLPVY-FGDAGSREVLHKVGAERACAA 1077 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~----~l~~------~g~~vi-~GDasd~e~L~~AgI~~A~~V 1077 (1158)
++.|+|.|.+|..++..|...+. +++++|.++++.+ .+.+ ....+. .+| ...+++||+|
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--------~~a~~~aDvV 73 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--------YGPTEDSDVC 73 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--------SGGGTTCSEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--------HHHhCCCCEE
Confidence 36789999999999999988887 8999999998764 1222 122333 222 2357789999
Q ss_pred EEecCCc-----------hhhHH----HHHHHHhhCCCceEEEEec
Q 001096 1078 AITLDTP-----------GANYR----TVWALSKYFPNVKTFVRAH 1108 (1158)
Q Consensus 1078 Ii~t~dd-----------~~Nl~----i~l~ar~l~p~~~IIara~ 1108 (1158)
|++.+.+ ..|.. ++..+++.+|+..+++..|
T Consensus 74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp EECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 9988665 34543 4456777889987666664
No 284
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=82.17 E-value=1.3 Score=47.46 Aligned_cols=72 Identities=15% Similarity=-0.011 Sum_probs=54.5
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC---CCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL---DLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~---g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. +.+|+.+++.|.++|.+|++++++++..+...+. ...++.+|.+|++.++++= ..+.|.+|-
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~ 85 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVN 85 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45777775 6799999999999999999999998877655332 3567789999998876541 125777776
Q ss_pred ec
Q 001096 1080 TL 1081 (1158)
Q Consensus 1080 ~t 1081 (1158)
..
T Consensus 86 nA 87 (254)
T 1hdc_A 86 NA 87 (254)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 285
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=82.15 E-value=1.3 Score=47.46 Aligned_cols=72 Identities=15% Similarity=0.091 Sum_probs=53.9
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-----CCCCEEEccCCCHHHHHhcCc------cccCEE
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----LDLPVYFGDAGSREVLHKVGA------ERACAA 1077 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-----~g~~vi~GDasd~e~L~~AgI------~~A~~V 1077 (1158)
+.++|.| .|.+|+.+++.|.++|++|++++++++..+...+ .++.++.+|.+|++.++++=- .+.|++
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 96 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIM 96 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4577776 4679999999999999999999999876544322 156788999999998766521 257887
Q ss_pred EEec
Q 001096 1078 AITL 1081 (1158)
Q Consensus 1078 Ii~t 1081 (1158)
|-..
T Consensus 97 i~~A 100 (278)
T 2bgk_A 97 FGNV 100 (278)
T ss_dssp EECC
T ss_pred EECC
Confidence 7544
No 286
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=82.07 E-value=0.51 Score=53.80 Aligned_cols=99 Identities=13% Similarity=0.014 Sum_probs=63.8
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh---
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA--- 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~--- 1086 (1158)
..++|+|.|.+|+.+++.+...|.+|+++|.++++.+.+.+.+...+..+..+.+.+.+ .+.++|.||-++..+..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~DvVI~~~~~~~~~~~ 246 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIET-AVAEADLLIGAVLVPGRRAP 246 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHH-HHHTCSEEEECCCCTTSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHH-HHcCCCEEEECCCcCCCCCC
Confidence 67999999999999999999999999999999998887765432111111123333332 13479999988866531
Q ss_pred hHHHHHHHHhhCCCceEEEEecC
Q 001096 1087 NYRTVWALSKYFPNVKTFVRAHD 1109 (1158)
Q Consensus 1087 Nl~i~l~ar~l~p~~~IIara~d 1109 (1158)
.+.....++...|...++-...+
T Consensus 247 ~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 247 ILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp CCBCHHHHTTSCTTCEEEETTCT
T ss_pred eecCHHHHhhCCCCCEEEEEecC
Confidence 11112234455566555554443
No 287
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=82.05 E-value=1.5 Score=46.50 Aligned_cols=72 Identities=15% Similarity=0.101 Sum_probs=53.8
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC--CCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~--g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++++..+.. +.. .+.++.+|.+|++.++++= ..+.|.
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 93 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDI 93 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45777764 7799999999999999999999998765433 222 4677889999998876541 125788
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
||-..
T Consensus 94 vi~~A 98 (260)
T 3awd_A 94 LVACA 98 (260)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77654
No 288
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=82.02 E-value=1.2 Score=47.55 Aligned_cols=72 Identities=8% Similarity=0.046 Sum_probs=53.8
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-------C-CCCEEEccCCCHHHHHhcCc------ccc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-------L-DLPVYFGDAGSREVLHKVGA------ERA 1074 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-------~-g~~vi~GDasd~e~L~~AgI------~~A 1074 (1158)
+.++|.|. +.+|+.+++.|.++|.+|++++++++..+...+ . +..++.+|.+|++.++++=- . .
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-i 86 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-A 86 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-C
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-C
Confidence 45677765 679999999999999999999999876654321 1 56778899999988765411 2 6
Q ss_pred CEEEEecC
Q 001096 1075 CAAAITLD 1082 (1158)
Q Consensus 1075 ~~VIi~t~ 1082 (1158)
|.+|-..+
T Consensus 87 d~lv~~Ag 94 (260)
T 2z1n_A 87 DILVYSTG 94 (260)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 77776554
No 289
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=82.00 E-value=0.68 Score=52.30 Aligned_cols=95 Identities=19% Similarity=0.172 Sum_probs=63.3
Q ss_pred ccccccCCcccHHHHHHHHhhCCC-CEEEEeCCchHHHHh----hh----CC--CCEEEccCCCHHHHHhcCccccCEEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIG----RA----LD--LPVYFGDAGSREVLHKVGAERACAAA 1078 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~~~v~~l----~~----~g--~~vi~GDasd~e~L~~AgI~~A~~VI 1078 (1158)
.++.|+|.|.+|..++..|...|+ +|+++|.|+++++.. .+ .+ ..+..- +| +++ .+++||.||
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~~e-a~~~aDiVi 83 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YS---YEA-ALTGADCVI 83 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CS---HHH-HHTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe--CC---HHH-HhCCCCEEE
Confidence 469999999999999999999888 999999999877652 11 11 222220 22 222 256899999
Q ss_pred EecCCch----------------hh----HHHHHHHHhhCCCceEEEEecCh
Q 001096 1079 ITLDTPG----------------AN----YRTVWALSKYFPNVKTFVRAHDI 1110 (1158)
Q Consensus 1079 i~t~dd~----------------~N----l~i~l~ar~l~p~~~IIara~d~ 1110 (1158)
++.+.+. .| ..++..+.+..|+..++.-+|-.
T Consensus 84 ~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~ 135 (331)
T 1pzg_A 84 VTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPL 135 (331)
T ss_dssp ECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred EccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCch
Confidence 9973321 12 23556777788987766554433
No 290
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=81.96 E-value=5.9 Score=39.62 Aligned_cols=101 Identities=15% Similarity=0.103 Sum_probs=66.3
Q ss_pred CCCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEE
Q 001096 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIar 1106 (1158)
...|.+||.|+...+.+ ...|+.+... .+-.+.++.+.-...|.|++-..-+. .-+.++..+|+.+|+++||+.
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~l 85 (184)
T 3rqi_A 7 DKNFLVIDDNEVFAGTLARGLERRGYAVRQA-HNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVL 85 (184)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEE-CSHHHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCCEEEEe-CCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEE
Confidence 35677777777655433 4456655332 22245566666667888877655443 336778888999999998888
Q ss_pred ecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1107 AHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1107 a~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+... +......++|++..+........
T Consensus 86 t~~~~~~~~~~a~~~Ga~~~l~KP~~~~~ 114 (184)
T 3rqi_A 86 TGYASIATAVQAVKDGADNYLAKPANVES 114 (184)
T ss_dssp ESSCCHHHHHHHHHHTCSEEEESSCCHHH
T ss_pred eCCCCHHHHHHHHHhCHHHheeCCCCHHH
Confidence 7754 45667788999887776655544
No 291
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=81.88 E-value=2.9 Score=42.59 Aligned_cols=93 Identities=9% Similarity=0.008 Sum_probs=62.9
Q ss_pred cccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHH---HHHh-cCccccCEEEEecCC
Q 001096 1009 QDHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSRE---VLHK-VGAERACAAAITLDT 1083 (1158)
Q Consensus 1009 ~~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e---~L~~-AgI~~A~~VIi~t~d 1083 (1158)
.+.++|.| .|.+|..+++.+...|.+|+++|.++++.+.+++.|...+. |..+++ .+.+ .+-...|.++-..+.
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~-d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 117 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVG-DSRSVDFADEILELTDGYGVDVVLNSLAG 117 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEE-ETTCSTHHHHHHHHTTTCCEEEEEECCCT
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEe-eCCcHHHHHHHHHHhCCCCCeEEEECCch
Confidence 35688999 69999999999999999999999999988888777765543 554433 2322 222357888776653
Q ss_pred chhhHHHHHHHHhhCCCceEEEE
Q 001096 1084 PGANYRTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1084 d~~Nl~i~l~ar~l~p~~~IIar 1106 (1158)
+ .....++.+.|.-+++..
T Consensus 118 ~----~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 118 E----AIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp H----HHHHHHHTEEEEEEEEEC
T ss_pred H----HHHHHHHHhccCCEEEEE
Confidence 2 233344555555455543
No 292
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=81.72 E-value=1.1 Score=48.11 Aligned_cols=73 Identities=14% Similarity=0.093 Sum_probs=53.5
Q ss_pred ccccccCCc-ccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC--CCCEEEccCCCHHHHHhcCc-----cccCEE
Q 001096 1010 DHIILCGFG-RVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVGA-----ERACAA 1077 (1158)
Q Consensus 1010 ~hvVIiG~G-~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~--g~~vi~GDasd~e~L~~AgI-----~~A~~V 1077 (1158)
+.++|.|.+ -+|+.+++.|.++|..|++++++++..+.. +.. .+.++.+|.+|++.++++-- .+.|.+
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~l 87 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVT 87 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEE
Confidence 457777754 599999999999999999999998876544 222 35678899999988765411 245676
Q ss_pred EEecC
Q 001096 1078 AITLD 1082 (1158)
Q Consensus 1078 Ii~t~ 1082 (1158)
|-..+
T Consensus 88 v~nAg 92 (252)
T 3h7a_A 88 IFNVG 92 (252)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65443
No 293
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=81.71 E-value=9.4 Score=36.09 Aligned_cols=101 Identities=12% Similarity=0.020 Sum_probs=63.6
Q ss_pred CCEEEEeCCchHHHHhh------hCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEE
Q 001096 1033 IPFVALDVRSDRVAIGR------ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFV 1105 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l~------~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIa 1105 (1158)
..+.++|.|+...+.+. ..|+.++..-.+-.+.++.+.-...+.+++-..-+. .-+.++..+|+.+|.++||+
T Consensus 3 ~~ILivdd~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ 82 (141)
T 3cu5_A 3 LRILIVDDEKLTRDGLIANINWKALSFDQIDQADDGINAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIF 82 (141)
T ss_dssp CEEEEECSCHHHHHHHHHHCCGGGSCCSEEEEESSHHHHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEE
T ss_pred ceEEEEeCCHHHHHHHHHHHHHccCCcEEeeecccHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEE
Confidence 46888998887655432 246666533333356666666567888887766543 34667888888899999888
Q ss_pred EecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1106 RAHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1106 ra~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.+... +......+.|++.++........
T Consensus 83 ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~ 112 (141)
T 3cu5_A 83 MSGYSDKEYLKAAIKFRAIRYVEKPIDPSE 112 (141)
T ss_dssp ECCSTTTCCC------CCCEEECSSCCHHH
T ss_pred EeCCCcHHHHHHHHhCCccEEEeCCCCHHH
Confidence 77644 45667778999998876655544
No 294
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=81.67 E-value=1.3 Score=47.53 Aligned_cols=73 Identities=11% Similarity=0.079 Sum_probs=54.4
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh----C--CCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA----L--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~----~--g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +-+|..+++.|.++|..|++++++++..+...+ . ...++.+|.+|++.++++= ..+.|.
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 86 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDI 86 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45777775 569999999999999999999999887765432 2 3567789999998776541 125677
Q ss_pred EEEecC
Q 001096 1077 AAITLD 1082 (1158)
Q Consensus 1077 VIi~t~ 1082 (1158)
+|-..+
T Consensus 87 lv~nAg 92 (257)
T 3imf_A 87 LINNAA 92 (257)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 776543
No 295
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=81.60 E-value=2 Score=44.92 Aligned_cols=72 Identities=13% Similarity=0.094 Sum_probs=54.6
Q ss_pred cccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh-----h--CCCCEEEccCCCHHHHHhcCc------cccCE
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-----A--LDLPVYFGDAGSREVLHKVGA------ERACA 1076 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~-----~--~g~~vi~GDasd~e~L~~AgI------~~A~~ 1076 (1158)
.++|.|. +.+|..+++.|.++|..|+++++++++.+... . ....++.+|.+|++.++++=- .+.|+
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDV 83 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence 4677775 56999999999999999999999988765432 1 245667899999998876532 25788
Q ss_pred EEEecC
Q 001096 1077 AAITLD 1082 (1158)
Q Consensus 1077 VIi~t~ 1082 (1158)
+|-..+
T Consensus 84 li~~Ag 89 (235)
T 3l77_A 84 VVANAG 89 (235)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 776543
No 296
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=81.53 E-value=5 Score=43.42 Aligned_cols=110 Identities=12% Similarity=0.124 Sum_probs=68.1
Q ss_pred cccccCC-cccHHHHHHHHhhC-CCCEE-EEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh
Q 001096 1011 HIILCGF-GRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~-g~~Vv-VID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N 1087 (1158)
.+.|+|. |++|+.+++.+.+. +++++ ++|.+ .|.+.+.. .++|++|=.+ +++.-
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~-------------------~dl~~~~~---~~~DvvIDfT-~p~a~ 58 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG-------------------DPLSLLTD---GNTEVVIDFT-HPDVV 58 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT-------------------CCTHHHHH---TTCCEEEECS-CTTTH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC-------------------CCHHHHhc---cCCcEEEEcc-ChHHH
Confidence 4789995 99999999999765 77776 55543 12222222 2578776555 33333
Q ss_pred HHHHHHHHhhCCCceEEEEe--cChhhHHHHHHC-----CCCeeecCCcHHHHHHHHHHHHhhhh
Q 001096 1088 YRTVWALSKYFPNVKTFVRA--HDIDHGLNLEKA-----GATAVVPETLEPSLQLAAAVLAQVIH 1145 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~IIara--~d~e~~~~L~~a-----GAd~VI~p~~~a~~~LA~~vl~~~i~ 1145 (1158)
...+..+.+.+ .++|+-+ -+.+..+.++++ ++..++.|+...+-.+...++..+..
T Consensus 59 ~~~~~~a~~~g--~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~~aa~ 121 (245)
T 1p9l_A 59 MGNLEFLIDNG--IHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAAR 121 (245)
T ss_dssp HHHHHHHHHTT--CEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHcC--CCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHHHHHHHh
Confidence 44444444444 3444422 345555566554 78889999998888877777766543
No 297
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=81.49 E-value=1.6 Score=49.27 Aligned_cols=73 Identities=18% Similarity=0.170 Sum_probs=53.4
Q ss_pred cccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHH--------------------HH---hhhCCCCEEEccCCCHH
Q 001096 1009 QDHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRV--------------------AI---GRALDLPVYFGDAGSRE 1064 (1158)
Q Consensus 1009 ~~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v--------------------~~---l~~~g~~vi~GDasd~e 1064 (1158)
..+++|.| .|-+|..+++.|.+.|++|+++|.+.... .. ....++.++.||.+|++
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~ 90 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 90 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHH
Confidence 44567776 58899999999999999999999764321 11 12346889999999999
Q ss_pred HHHhcCcc--ccCEEEEecC
Q 001096 1065 VLHKVGAE--RACAAAITLD 1082 (1158)
Q Consensus 1065 ~L~~AgI~--~A~~VIi~t~ 1082 (1158)
.+.++ ++ +.|+||-+..
T Consensus 91 ~~~~~-~~~~~~D~Vih~A~ 109 (404)
T 1i24_A 91 FLAES-FKSFEPDSVVHFGE 109 (404)
T ss_dssp HHHHH-HHHHCCSEEEECCS
T ss_pred HHHHH-HhccCCCEEEECCC
Confidence 88765 22 3788877653
No 298
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=81.47 E-value=1.2 Score=47.45 Aligned_cols=72 Identities=14% Similarity=-0.059 Sum_probs=53.7
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. +.+|+.+++.|.++|.+|++++++++..+...+ ....++.+|.+|++.++++= ..+.|.+|-
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~ 86 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVN 86 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35777775 679999999999999999999999887665432 24567789999998775431 124577766
Q ss_pred ec
Q 001096 1080 TL 1081 (1158)
Q Consensus 1080 ~t 1081 (1158)
..
T Consensus 87 ~A 88 (253)
T 1hxh_A 87 NA 88 (253)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 299
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=81.47 E-value=2.1 Score=48.75 Aligned_cols=88 Identities=14% Similarity=0.106 Sum_probs=63.5
Q ss_pred cccccccCCcccHHHHHHHHhhCCC-CEEEEeCCch-------------------HHHHh----hhC----CCCEEEccC
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSD-------------------RVAIG----RAL----DLPVYFGDA 1060 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~~-------------------~v~~l----~~~----g~~vi~GDa 1060 (1158)
..+|+|+|.|.+|..+++.|...|+ .++++|.|.- +++.+ ++. .+..+..+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i 197 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNI 197 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeeccc
Confidence 5689999999999999999999997 7999998852 22222 221 234555666
Q ss_pred CCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhC
Q 001096 1061 GSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYF 1098 (1158)
Q Consensus 1061 sd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~ 1098 (1158)
++...+.. ++++|.||.++++.. ....+...+++.+
T Consensus 198 ~~~~~~~~--~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~ 234 (353)
T 3h5n_A 198 NDYTDLHK--VPEADIWVVSADHPFNLINWVNKYCVRAN 234 (353)
T ss_dssp CSGGGGGG--SCCCSEEEECCCCSTTHHHHHHHHHHHTT
T ss_pred CchhhhhH--hccCCEEEEecCChHHHHHHHHHHHHHhC
Confidence 65554555 789999999998887 6666666666665
No 300
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=81.45 E-value=1.2 Score=47.14 Aligned_cols=73 Identities=8% Similarity=0.086 Sum_probs=54.4
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCC-CEEEccCCCHHHHHhcC-----ccccCEEEE
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDL-PVYFGDAGSREVLHKVG-----AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~-~vi~GDasd~e~L~~Ag-----I~~A~~VIi 1079 (1158)
+.++|.| .|.+|+.+++.|.++|++|++++++++..+...+ ... .++.+|.+|++.++++- ..+.|++|-
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~ 91 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILVN 91 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEE
Confidence 4567776 4779999999999999999999999887654432 123 66889999999887541 135777776
Q ss_pred ecC
Q 001096 1080 TLD 1082 (1158)
Q Consensus 1080 ~t~ 1082 (1158)
..+
T Consensus 92 ~Ag 94 (254)
T 2wsb_A 92 SAG 94 (254)
T ss_dssp CCC
T ss_pred CCc
Confidence 543
No 301
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=81.36 E-value=6.1 Score=40.01 Aligned_cols=101 Identities=14% Similarity=0.073 Sum_probs=68.7
Q ss_pred CCCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEE
Q 001096 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIar 1106 (1158)
...|.++|.|+...+.+ ...|+.+... .+-.+.++.+.-...|.+++-..-+. .-+.++..+|+.+|+++||+.
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~l 82 (208)
T 1yio_A 4 KPTVFVVDDDMSVREGLRNLLRSAGFEVETF-DCASTFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFI 82 (208)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCEEEEE-SSHHHHHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEE
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCCceEEEc-CCHHHHHHhhhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEE
Confidence 34688888887665433 4457776643 23355666666667888887776554 346778889998999998887
Q ss_pred ecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1107 AHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1107 a~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+... +......++|++..+........
T Consensus 83 s~~~~~~~~~~a~~~Ga~~~l~Kp~~~~~ 111 (208)
T 1yio_A 83 TAHGDIPMTVRAMKAGAIEFLPKPFEEQA 111 (208)
T ss_dssp ESCTTSCCCHHHHHTTEEEEEESSCCHHH
T ss_pred eCCCCHHHHHHHHHCCCcEEEeCCCCHHH
Confidence 7654 46677788999887766554443
No 302
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=81.34 E-value=1.3 Score=47.96 Aligned_cols=74 Identities=14% Similarity=0.106 Sum_probs=54.6
Q ss_pred cccc-cccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC-----ccccCE
Q 001096 1007 DLQD-HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG-----AERACA 1076 (1158)
Q Consensus 1007 ~l~~-hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag-----I~~A~~ 1076 (1158)
++++ .++|.|. +-+|+.+++.|.++|..|++++++++..+.+.+ ....++.+|.+|++.++++- ....|.
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCe
Confidence 3443 4667775 568999999999999999999999988765533 25678899999998876531 124566
Q ss_pred EEEe
Q 001096 1077 AAIT 1080 (1158)
Q Consensus 1077 VIi~ 1080 (1158)
+|..
T Consensus 107 lv~~ 110 (281)
T 3ppi_A 107 AVVA 110 (281)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6644
No 303
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=81.32 E-value=2.1 Score=48.52 Aligned_cols=107 Identities=16% Similarity=0.082 Sum_probs=70.6
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHHH
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRT 1090 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~i 1090 (1158)
.++|+|.|..|+.+++.+++.|++++++|.+++... .......+.+|..|.+.+.++- ++.|.|+...++.. ..+
T Consensus 3 ~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~--~~~~~~~~~~~~~d~~~l~~~~-~~~d~v~~~~e~~~--~~~ 77 (380)
T 3ax6_A 3 KIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTPRSPA--GQVADEQIVAGFFDSERIEDLV-KGSDVTTYDLEHID--VQT 77 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTT--GGGSSEEEECCTTCHHHHHHHH-HTCSEEEESCSCSC--HHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCch--hhhCceEEECCCCCHHHHHHHH-hcCCEEEecccCCC--HHH
Confidence 588999999999999999999999999999766431 1122346778999988887664 67888776555442 223
Q ss_pred HHHHHhhC----CCceEEEEecChh-hHHHHHHCCCC
Q 001096 1091 VWALSKYF----PNVKTFVRAHDID-HGLNLEKAGAT 1122 (1158)
Q Consensus 1091 ~l~ar~l~----p~~~IIara~d~e-~~~~L~~aGAd 1122 (1158)
+..+.+.+ |+...+....|.. ..+.+++.|+.
T Consensus 78 ~~~l~~~gi~~~~~~~~~~~~~dK~~~~~~l~~~gip 114 (380)
T 3ax6_A 78 LKKLYNEGYKIHPSPYTLEIIQDKFVQKEFLKKNGIP 114 (380)
T ss_dssp HHHHHHTTCEESSCHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred HHHHHHCCCeECCCHHHHHHhcCHHHHHHHHHHcCCC
Confidence 33333332 3333333444443 44556777865
No 304
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=81.26 E-value=1.3 Score=48.05 Aligned_cols=72 Identities=13% Similarity=0.129 Sum_probs=52.9
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----hC-----CCCEEEccCCCHHHHHhcC------ccc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL-----DLPVYFGDAGSREVLHKVG------AER 1073 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~~-----g~~vi~GDasd~e~L~~Ag------I~~ 1073 (1158)
+.++|.|. +.+|+.+++.|.++|.+|++++++++..+... .. ...++.+|.+|++.++++= ..+
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK 86 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 35777774 56999999999999999999999987765432 22 3567889999998776541 125
Q ss_pred cCEEEEec
Q 001096 1074 ACAAAITL 1081 (1158)
Q Consensus 1074 A~~VIi~t 1081 (1158)
.|++|-..
T Consensus 87 iD~lv~nA 94 (280)
T 1xkq_A 87 IDVLVNNA 94 (280)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 67776544
No 305
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=81.23 E-value=8.3 Score=35.21 Aligned_cols=100 Identities=13% Similarity=0.106 Sum_probs=63.3
Q ss_pred CCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEEe
Q 001096 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRA 1107 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIara 1107 (1158)
..+.++|.|+.....+ ...|+.+... .+..+.+..+.-...+.+++-..-+. ..+.++..+|+.+|.+++|+.+
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~~~~v~~~-~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s 82 (124)
T 1srr_A 4 EKILIVDDQSGIRILLNEVFNKEGYQTFQA-ANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMT 82 (124)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCEEEEE-SSHHHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEE
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCCcEEEEe-CCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEE
Confidence 3577777776654332 4456665532 12244455444456788887765544 3456788888888999988877
Q ss_pred cCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1108 HDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1108 ~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
... +......+.|++..+........
T Consensus 83 ~~~~~~~~~~~~~~g~~~~l~KP~~~~~ 110 (124)
T 1srr_A 83 AYGELDMIQESKELGALTHFAKPFDIDE 110 (124)
T ss_dssp SSCCHHHHHHHHHHTCCCEEESSCCHHH
T ss_pred ccCchHHHHHHHhcChHhhccCCCCHHH
Confidence 654 45566678899887766554443
No 306
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=81.21 E-value=1.3 Score=50.66 Aligned_cols=67 Identities=15% Similarity=0.078 Sum_probs=50.3
Q ss_pred ccccccCCcccHHHHHHHHhhCCCC-EEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIP-FVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~-VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
..+.|+|+|.+|+.+++.|...|.+ |++.|.++...+...+.|... ..+.+.+- .++|.|++.++..
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~----~~~l~ell----~~aDvV~l~~P~t 232 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARR----VENIEELV----AQADIVTVNAPLH 232 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEE----CSSHHHHH----HTCSEEEECCCCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEe----cCCHHHHH----hcCCEEEECCCCC
Confidence 4588999999999999999999998 999998876655555556432 12333332 3689999988775
No 307
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=81.18 E-value=1.4 Score=46.31 Aligned_cols=72 Identities=14% Similarity=0.001 Sum_probs=53.9
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-------CCCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-------LDLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-------~g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++++..+...+ ..+.++.+|.+|++.++++= ..+.|
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAID 82 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 35677765 679999999999999999999999877654321 23567889999998876652 12577
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
.+|-..
T Consensus 83 ~li~~A 88 (250)
T 2cfc_A 83 VLVNNA 88 (250)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 877654
No 308
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=81.15 E-value=1.7 Score=46.59 Aligned_cols=72 Identities=13% Similarity=0.106 Sum_probs=53.0
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhh--------hCCCCEEEccCCCHHHHHhcC------cccc
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR--------ALDLPVYFGDAGSREVLHKVG------AERA 1074 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~--------~~g~~vi~GDasd~e~L~~Ag------I~~A 1074 (1158)
+.++|.| .+.+|+.+++.|.++|.+|++++++++..+... .....++.+|.+|++.++++= ..+.
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 93 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI 93 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4567776 467999999999999999999999987765432 224567789999998876541 1256
Q ss_pred CEEEEec
Q 001096 1075 CAAAITL 1081 (1158)
Q Consensus 1075 ~~VIi~t 1081 (1158)
|++|-..
T Consensus 94 d~lv~nA 100 (267)
T 1iy8_A 94 DGFFNNA 100 (267)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 7777554
No 309
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=81.06 E-value=1.4 Score=47.07 Aligned_cols=73 Identities=11% Similarity=0.040 Sum_probs=55.0
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. +-+|+.+++.|.++|.+|++++++++..+...+ ....++.+|.+|++.++++= ..+.|.+|-
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~ 88 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVN 88 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45777775 669999999999999999999999887765532 24677889999998766531 125777776
Q ss_pred ecC
Q 001096 1080 TLD 1082 (1158)
Q Consensus 1080 ~t~ 1082 (1158)
..+
T Consensus 89 ~Ag 91 (259)
T 4e6p_A 89 NAA 91 (259)
T ss_dssp CCC
T ss_pred CCC
Confidence 544
No 310
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=81.02 E-value=1.6 Score=46.55 Aligned_cols=73 Identities=12% Similarity=-0.038 Sum_probs=54.3
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---------CCCCEEEccCCCHHHHHhcC------ccc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---------LDLPVYFGDAGSREVLHKVG------AER 1073 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---------~g~~vi~GDasd~e~L~~Ag------I~~ 1073 (1158)
+.++|.|. +-+|..+++.|.++|..|++++++++..+...+ ....++.+|.+|++.++++= ..+
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA 87 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 45777775 669999999999999999999999887655432 34668889999988765431 125
Q ss_pred cCEEEEecC
Q 001096 1074 ACAAAITLD 1082 (1158)
Q Consensus 1074 A~~VIi~t~ 1082 (1158)
.|.+|-..+
T Consensus 88 iD~lvnnAg 96 (250)
T 3nyw_A 88 VDILVNAAA 96 (250)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCC
Confidence 677665543
No 311
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=81.00 E-value=4.3 Score=45.69 Aligned_cols=94 Identities=18% Similarity=0.243 Sum_probs=64.5
Q ss_pred cccccccCCcccHHHHHHHHhhCCC-CEEEEeCCchHHHHh----hh------CCCCEEE-ccCCCHHHHHhcCccccCE
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIG----RA------LDLPVYF-GDAGSREVLHKVGAERACA 1076 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~~~v~~l----~~------~g~~vi~-GDasd~e~L~~AgI~~A~~ 1076 (1158)
+.++.|+|.|.+|..++..|...|+ +|+++|.|+++.+.. .+ ....+.. .| + ..+++||.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d------~--~al~~aD~ 85 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENN------Y--EYLQNSDV 85 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC------G--GGGTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCC------H--HHHCCCCE
Confidence 3579999999999999999999998 999999999877632 11 0122322 22 1 23678999
Q ss_pred EEEecCCch-----------hhHH----HHHHHHhhCCCceEEEEecCh
Q 001096 1077 AAITLDTPG-----------ANYR----TVWALSKYFPNVKTFVRAHDI 1110 (1158)
Q Consensus 1077 VIi~t~dd~-----------~Nl~----i~l~ar~l~p~~~IIara~d~ 1110 (1158)
||++.+-+. .|.. ++..+.+..|+..++..+|-.
T Consensus 86 VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~ 134 (328)
T 2hjr_A 86 VIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPL 134 (328)
T ss_dssp EEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred EEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCch
Confidence 999974432 3443 355666778987776655433
No 312
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=81.00 E-value=4.4 Score=44.73 Aligned_cols=105 Identities=21% Similarity=0.180 Sum_probs=66.1
Q ss_pred ccccccCCcccHHH-HHHHHhh-CCCCEE-EEeCCchHHHHhhh-CCCCEEEccCCCHHHHHhcCccccCEEEEecCCch
Q 001096 1010 DHIILCGFGRVGQI-IAQLLSE-RLIPFV-ALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~-Ia~~L~e-~g~~Vv-VID~d~~~v~~l~~-~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
-++.|+|.|.+|+. .++.|.+ .+.+++ +.|.++++.+.+.+ .|.+ + ..+.+.| ..++|+|+++++++.
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~-~---~~~~~~l----~~~~D~V~i~tp~~~ 77 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP-Y---ADSLSSL----AASCDAVFVHSSTAS 77 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC-B---CSSHHHH----HTTCSEEEECSCTTH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCC-c---cCcHHHh----hcCCCEEEEeCCchh
Confidence 36889999999997 8888865 466766 88999998876543 3665 2 3445555 357999999999874
Q ss_pred hhHHHHHHHHhhCCCceEEEE---ecChhhHHHH----HHCCCCeee
Q 001096 1086 ANYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV 1125 (1158)
Q Consensus 1086 ~Nl~i~l~ar~l~p~~~IIar---a~d~e~~~~L----~~aGAd~VI 1125 (1158)
. ...+..+-+.+ ..|++. +.+.+..+.+ ++.|....+
T Consensus 78 h-~~~~~~al~~G--~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~ 121 (319)
T 1tlt_A 78 H-FDVVSTLLNAG--VHVCVDKPLAENLRDAERLVELAARKKLTLMV 121 (319)
T ss_dssp H-HHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred H-HHHHHHHHHcC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 3 33333333333 356654 2344443333 455665544
No 313
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=80.96 E-value=2.7 Score=49.99 Aligned_cols=75 Identities=19% Similarity=0.243 Sum_probs=52.7
Q ss_pred cccccCCcccHHHHHHHHhhC-CC-CEEEEeCCch----HHHHhhhCCCCEEEccCCCHHHHH-------------hcCc
Q 001096 1011 HIILCGFGRVGQIIAQLLSER-LI-PFVALDVRSD----RVAIGRALDLPVYFGDAGSREVLH-------------KVGA 1071 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~-g~-~VvVID~d~~----~v~~l~~~g~~vi~GDasd~e~L~-------------~AgI 1071 (1158)
.+.|+|.|.+|..++..|.+. |+ +|+++|.|++ +++.+.+...++-.-++.-.+.+. ...+
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~ea~ 99 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFSRI 99 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGGGG
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHHHH
Confidence 588999999999999999999 99 9999999999 998886532221000000011111 1125
Q ss_pred cccCEEEEecCCch
Q 001096 1072 ERACAAAITLDTPG 1085 (1158)
Q Consensus 1072 ~~A~~VIi~t~dd~ 1085 (1158)
++||.+|++.+++.
T Consensus 100 ~~aDvViiaVptp~ 113 (478)
T 3g79_A 100 SELDAVTLAIQTPF 113 (478)
T ss_dssp GGCSEEEECCCCCC
T ss_pred hcCCEEEEecCCch
Confidence 68999999998763
No 314
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=80.95 E-value=1.6 Score=47.53 Aligned_cols=72 Identities=13% Similarity=0.108 Sum_probs=56.0
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC---CCCEEEccCCCHHHHHhc--CccccCEEEEec
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL---DLPVYFGDAGSREVLHKV--GAERACAAAITL 1081 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~---g~~vi~GDasd~e~L~~A--gI~~A~~VIi~t 1081 (1158)
+.++|.|. +-+|..+++.|.++|..|++++++++..+...+. .+.++.+|.+|++.++++ .+.+.|++|-..
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nA 94 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNA 94 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence 45677775 5699999999999999999999999888766443 467888999999988765 223567776544
No 315
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=80.92 E-value=1.4 Score=46.15 Aligned_cols=73 Identities=12% Similarity=0.032 Sum_probs=54.8
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh-------hCCCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-------ALDLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~-------~~g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++++..+... .....++.+|.+|++.++++= ..+.|
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 87 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID 87 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 45677765 67999999999999999999999987665432 124567889999999876651 12578
Q ss_pred EEEEecC
Q 001096 1076 AAAITLD 1082 (1158)
Q Consensus 1076 ~VIi~t~ 1082 (1158)
.||-...
T Consensus 88 ~vi~~Ag 94 (248)
T 2pnf_A 88 ILVNNAG 94 (248)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8776553
No 316
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=80.91 E-value=8.1 Score=35.79 Aligned_cols=102 Identities=15% Similarity=0.148 Sum_probs=61.5
Q ss_pred CCCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCcc-ccCEEEEecCCchhh-HHHHHHHHhh--CCCceE
Q 001096 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAE-RACAAAITLDTPGAN-YRTVWALSKY--FPNVKT 1103 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~-~A~~VIi~t~dd~~N-l~i~l~ar~l--~p~~~I 1103 (1158)
...+.++|.|+...+.+ .+.|+..+..-.+..+.++.+.-. ..+.+++-..-+..| +.++..+|+. .|+++|
T Consensus 5 ~~~iLivdd~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pi 84 (129)
T 3h1g_A 5 SMKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPI 84 (129)
T ss_dssp -CCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCE
T ss_pred CcEEEEEeCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeE
Confidence 35688888877655433 455765332222334444443222 467777666555433 5677778874 467888
Q ss_pred EEEecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1104 FVRAHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1104 Iara~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
|+.+.+. +......++|++..+........
T Consensus 85 i~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~ 116 (129)
T 3h1g_A 85 IMITAEGGKAEVITALKAGVNNYIVKPFTPQV 116 (129)
T ss_dssp EEEESCCSHHHHHHHHHHTCCEEEESCCCHHH
T ss_pred EEEeCCCChHHHHHHHHcCccEEEeCCCCHHH
Confidence 8877654 45566778999988776665554
No 317
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=80.89 E-value=4 Score=45.94 Aligned_cols=94 Identities=20% Similarity=0.120 Sum_probs=64.8
Q ss_pred cccccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHHH----hhhC-----CCCEEEccCCCHHHHHhcCccccCEE
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAI----GRAL-----DLPVYFGDAGSREVLHKVGAERACAA 1077 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~~----l~~~-----g~~vi~GDasd~e~L~~AgI~~A~~V 1077 (1158)
+.++.|+|.|.+|..++-.|...+. +++++|.|+++.+. +.+. ... +.+| + ...+++||.|
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~-i~~~--~-----~~a~~~aDvV 80 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKK-IYSA--E-----YSDAKDADLV 80 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCE-EEEC--C-----GGGGGGCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeE-EEEC--C-----HHHhCCCCEE
Confidence 3579999999999999999987665 89999999887643 2221 122 3332 1 2237799999
Q ss_pred EEecCCch-----------hhHH----HHHHHHhhCCCceEEEEecChh
Q 001096 1078 AITLDTPG-----------ANYR----TVWALSKYFPNVKTFVRAHDID 1111 (1158)
Q Consensus 1078 Ii~t~dd~-----------~Nl~----i~l~ar~l~p~~~IIara~d~e 1111 (1158)
|++.+-+. .|.. ++..+++.+|+..+++. .|+-
T Consensus 81 ii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~-tNPv 128 (326)
T 2zqz_A 81 VITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA-ANPV 128 (326)
T ss_dssp EECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC-SSSH
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe-CCcH
Confidence 99986652 3433 44566777999888885 5553
No 318
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=80.82 E-value=1.6 Score=47.19 Aligned_cols=73 Identities=15% Similarity=0.026 Sum_probs=55.5
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcCc------cccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVGA------ERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~AgI------~~A~~VIi 1079 (1158)
+.++|.|. |-+|..+++.|.++|+.|++++++++..+.+.+ ....++.+|.+|++.++++=- .+.|++|-
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~ 85 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVN 85 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 45777775 679999999999999999999999887765532 356788899999988765411 25677766
Q ss_pred ecC
Q 001096 1080 TLD 1082 (1158)
Q Consensus 1080 ~t~ 1082 (1158)
..+
T Consensus 86 ~Ag 88 (281)
T 3m1a_A 86 NAG 88 (281)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 319
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=80.74 E-value=1.7 Score=48.83 Aligned_cols=73 Identities=12% Similarity=0.105 Sum_probs=55.5
Q ss_pred cccccccCCcccHHHHHHHHhhCCC-CEEEEeCC---chHHHHhhh-----CCCCEEEccCCCHHHHHhcCccccCEEEE
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVR---SDRVAIGRA-----LDLPVYFGDAGSREVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d---~~~v~~l~~-----~g~~vi~GDasd~e~L~~AgI~~A~~VIi 1079 (1158)
.++++|+|.|..|+.++..|.+.|. +|++++++ .++.+.+.+ .+..+...+..+.+.|.++ +.++|.||-
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~-l~~aDiIIN 232 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKE-IAESVIFTN 232 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH-HHTCSEEEE
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhh-hcCCCEEEE
Confidence 3578999999999999999999998 89999999 777665532 2444555566666555443 457999998
Q ss_pred ecC
Q 001096 1080 TLD 1082 (1158)
Q Consensus 1080 ~t~ 1082 (1158)
+|+
T Consensus 233 aTp 235 (315)
T 3tnl_A 233 ATG 235 (315)
T ss_dssp CSS
T ss_pred Ccc
Confidence 886
No 320
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=80.72 E-value=2.9 Score=47.34 Aligned_cols=74 Identities=9% Similarity=0.146 Sum_probs=59.6
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhh-hCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~-~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
...++|.|.|.+|..+++.++..|..|++++.++++.+.+. +.|...+. |..+.+.++++. ..+|+++-+++.+
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~-~~~~~~~~~~~~-~~~D~vid~~g~~ 262 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFL-VSRDQEQMQAAA-GTLDGIIDTVSAV 262 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEE-ETTCHHHHHHTT-TCEEEEEECCSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEE-eccCHHHHHHhh-CCCCEEEECCCcH
Confidence 35688999999999999999999999999999999888776 77876543 566666666653 4789988888765
No 321
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=80.66 E-value=4.4 Score=45.10 Aligned_cols=93 Identities=18% Similarity=0.212 Sum_probs=63.2
Q ss_pred ccccccCCcccHHHHHHHHhhCCC-CEEEEeCCchHHHHh----hh------CCCCEEE-ccCCCHHHHHhcCccccCEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIG----RA------LDLPVYF-GDAGSREVLHKVGAERACAA 1077 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~~~v~~l----~~------~g~~vi~-GDasd~e~L~~AgI~~A~~V 1077 (1158)
.++.|+|.|.+|..++..|...|+ +++++|.|+++.+.. .+ ....+.. +| + ..+++||.|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~--~a~~~aD~V 74 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN------Y--ADTANSDVI 74 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC------G--GGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCC------H--HHHCCCCEE
Confidence 468999999999999999998886 899999998766432 11 1223332 33 1 226789999
Q ss_pred EEecCCc-----------hhhH----HHHHHHHhhCCCceEEEEecCh
Q 001096 1078 AITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAHDI 1110 (1158)
Q Consensus 1078 Ii~t~dd-----------~~Nl----~i~l~ar~l~p~~~IIara~d~ 1110 (1158)
|++.+.+ ..|. .++..+++..|+..++..+|-.
T Consensus 75 i~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 75 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp EECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 9997443 2343 3455667778887777655433
No 322
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.64 E-value=1.5 Score=47.15 Aligned_cols=72 Identities=11% Similarity=0.034 Sum_probs=53.6
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC--CCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~--g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+.. .+. ...++.+|.+|++.++++= ..+.|.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 91 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDV 91 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 35677775 5699999999999999999999998876544 223 4567789999998775431 125678
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 92 lv~nA 96 (264)
T 3ucx_A 92 VINNA 96 (264)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77654
No 323
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=80.57 E-value=2.1 Score=47.26 Aligned_cols=73 Identities=12% Similarity=0.119 Sum_probs=53.3
Q ss_pred ccccccCC-cccHHHHHHHHhhCC--CCEEEEeCCch--HHHHhh----hCCCCEEEccCCCHHHHHhcCc-cccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERL--IPFVALDVRSD--RVAIGR----ALDLPVYFGDAGSREVLHKVGA-ERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g--~~VvVID~d~~--~v~~l~----~~g~~vi~GDasd~e~L~~AgI-~~A~~VIi 1079 (1158)
..++|.|. |-+|..+++.|.+.| +.|++++.... ....+. ..++.++.||.+|++.++++=- .++|+||-
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 104 (346)
T 4egb_A 25 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVN 104 (346)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEEE
Confidence 46888887 999999999999998 67777776532 122222 2478899999999999877622 14888886
Q ss_pred ecC
Q 001096 1080 TLD 1082 (1158)
Q Consensus 1080 ~t~ 1082 (1158)
+..
T Consensus 105 ~A~ 107 (346)
T 4egb_A 105 FAA 107 (346)
T ss_dssp CCC
T ss_pred CCc
Confidence 654
No 324
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=80.54 E-value=1.7 Score=46.42 Aligned_cols=73 Identities=15% Similarity=0.081 Sum_probs=54.1
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh-------hCCCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-------ALDLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~-------~~g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.|. +.+|+.+++.|.++|++|++++++++..+... .....++.+|.+|++.++++= ..+.|
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGAD 87 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 45777775 67999999999999999999999987665432 123567789999998776541 12578
Q ss_pred EEEEecC
Q 001096 1076 AAAITLD 1082 (1158)
Q Consensus 1076 ~VIi~t~ 1082 (1158)
++|-..+
T Consensus 88 ~lv~~Ag 94 (263)
T 3ai3_A 88 ILVNNAG 94 (263)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8776553
No 325
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=80.44 E-value=1.2 Score=47.15 Aligned_cols=72 Identities=17% Similarity=0.063 Sum_probs=54.3
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----hC--CCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~~--g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +.+|..+++.|.++|.+|++++++++..+.+. +. ...++.+|.+|++.++++= ..+.|+
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 89 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDY 89 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45777775 66899999999999999999999988765542 22 3567789999998776541 125778
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 90 li~~A 94 (253)
T 3qiv_A 90 LVNNA 94 (253)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77654
No 326
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=80.44 E-value=4.3 Score=36.60 Aligned_cols=99 Identities=10% Similarity=0.080 Sum_probs=62.2
Q ss_pred CEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEEec
Q 001096 1034 PFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRAH 1108 (1158)
Q Consensus 1034 ~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIara~ 1108 (1158)
.+.++|.|+...+.+ ...|+.+...+ +..+.++...-.+.+.+++-..-+. ..+.++..+|+..|+.++++.+.
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~~~~v~~~~-~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 81 (116)
T 3a10_A 3 RILVVDDEPNIRELLKEELQEEGYEIDTAE-NGEEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTA 81 (116)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEES
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCEEEEeC-CHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEEC
Confidence 467777776654322 34566655322 2244454444456788777665443 34667888888888889888877
Q ss_pred ChhhHHHHHHCCCCeeecCCcHHHH
Q 001096 1109 DIDHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1109 d~e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
..+......+.|++..+........
T Consensus 82 ~~~~~~~~~~~g~~~~l~Kp~~~~~ 106 (116)
T 3a10_A 82 YSHYRSDMSSWAADEYVVKSFNFDE 106 (116)
T ss_dssp CGGGGGCGGGGGSSEEEECCSSTHH
T ss_pred CcchHHHHHhccccceEECCCCHHH
Confidence 6655556667899888766554443
No 327
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=80.40 E-value=1.3 Score=48.76 Aligned_cols=74 Identities=16% Similarity=0.122 Sum_probs=54.3
Q ss_pred cccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchH-----HHHh-hhCCCCEEEccCCCHHHHHhcCcc-ccCEEEEe
Q 001096 1009 QDHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDR-----VAIG-RALDLPVYFGDAGSREVLHKVGAE-RACAAAIT 1080 (1158)
Q Consensus 1009 ~~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~-----v~~l-~~~g~~vi~GDasd~e~L~~AgI~-~A~~VIi~ 1080 (1158)
...++|.|. |-+|..+++.|.+.|++|+++++++.. .+.+ ...++.++.||.+|++.++++=-+ +.|+||-+
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 93 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL 93 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEEC
Confidence 345777775 899999999999999999999988653 2222 123577899999999988765211 46888766
Q ss_pred cC
Q 001096 1081 LD 1082 (1158)
Q Consensus 1081 t~ 1082 (1158)
..
T Consensus 94 A~ 95 (335)
T 1rpn_A 94 AA 95 (335)
T ss_dssp CS
T ss_pred cc
Confidence 54
No 328
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=80.39 E-value=7.1 Score=36.40 Aligned_cols=100 Identities=8% Similarity=0.007 Sum_probs=63.1
Q ss_pred CEEEEeCCchHHHHh----hhCCCCEEEccCCC-HHHHHhcCccccCEEEEecCCchh-hHHHHHHHHhhCCCceEEEEe
Q 001096 1034 PFVALDVRSDRVAIG----RALDLPVYFGDAGS-REVLHKVGAERACAAAITLDTPGA-NYRTVWALSKYFPNVKTFVRA 1107 (1158)
Q Consensus 1034 ~VvVID~d~~~v~~l----~~~g~~vi~GDasd-~e~L~~AgI~~A~~VIi~t~dd~~-Nl~i~l~ar~l~p~~~IIara 1107 (1158)
.++++|.|+...+.+ ...|.....+.+.+ .+.++.+.-...+.+++-..-+.. -+.++..+|+.+|+++||+.+
T Consensus 5 ~Ilivdd~~~~~~~l~~~l~~~~~~~~v~~~~~~~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls 84 (133)
T 3b2n_A 5 SLIIAEDQNMLRQAMVQLIKLHGDFEILADTDNGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVT 84 (133)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHSSEEEEEEESCHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhhCCCcEEEEEcCCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEe
Confidence 577888887655433 22332122333333 444554444467888877665443 356788888888999988887
Q ss_pred cCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1108 HDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1108 ~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
... +......+.|++..+........
T Consensus 85 ~~~~~~~~~~~~~~ga~~~l~Kp~~~~~ 112 (133)
T 3b2n_A 85 TFKRPGYFEKAVVNDVDAYVLKERSIEE 112 (133)
T ss_dssp SCCCHHHHHHHHHTTCSEEEETTSCHHH
T ss_pred cCCCHHHHHHHHHcCCcEEEECCCCHHH
Confidence 654 46667778999988876655544
No 329
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=80.39 E-value=2.1 Score=50.95 Aligned_cols=75 Identities=21% Similarity=0.266 Sum_probs=58.6
Q ss_pred cccccccCCcccHHH-HHHHHhhCCCCEEEEeCCch-HHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1009 QDHIILCGFGRVGQI-IAQLLSERLIPFVALDVRSD-RVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~-Ia~~L~e~g~~VvVID~d~~-~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
.+++.++|.|..|.. +++.|.++|++|.+.|.++. ..+.+++.|+++..|. +++ ++.++|.||+...=+..
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~--~~~-----~~~~~d~vV~Spgi~~~ 94 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHH--RPE-----NVLDASVVVVSTAISAD 94 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSC--CGG-----GGTTCSEEEECTTSCTT
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCC--CHH-----HcCCCCEEEECCCCCCC
Confidence 368999999999996 89999999999999997654 4567888999999883 333 24568998887665555
Q ss_pred hHHH
Q 001096 1087 NYRT 1090 (1158)
Q Consensus 1087 Nl~i 1090 (1158)
|-.+
T Consensus 95 ~p~~ 98 (494)
T 4hv4_A 95 NPEI 98 (494)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 5443
No 330
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=80.33 E-value=1.5 Score=47.41 Aligned_cols=72 Identities=10% Similarity=-0.003 Sum_probs=54.5
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh--CCCCEEEccCCCHHHHHhcC------ccccCEEEEe
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA--LDLPVYFGDAGSREVLHKVG------AERACAAAIT 1080 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~--~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi~ 1080 (1158)
+.++|.|. +.+|+.+++.|.++|++|++++++++..+.+.+ .+..++.+|.+|++.++++= ..+.|++|-.
T Consensus 10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n 89 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNN 89 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 45777775 679999999999999999999999887765533 24678889999998876541 1256777754
Q ss_pred c
Q 001096 1081 L 1081 (1158)
Q Consensus 1081 t 1081 (1158)
.
T Consensus 90 A 90 (270)
T 1yde_A 90 A 90 (270)
T ss_dssp C
T ss_pred C
Confidence 4
No 331
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=80.32 E-value=1.5 Score=46.92 Aligned_cols=72 Identities=13% Similarity=0.011 Sum_probs=52.1
Q ss_pred ccccccCCc-c--cHHHHHHHHhhCCCCEEEEeCCchHHHHh---hh----CCCCEEEccCCCHHHHHhcC------ccc
Q 001096 1010 DHIILCGFG-R--VGQIIAQLLSERLIPFVALDVRSDRVAIG---RA----LDLPVYFGDAGSREVLHKVG------AER 1073 (1158)
Q Consensus 1010 ~hvVIiG~G-~--vG~~Ia~~L~e~g~~VvVID~d~~~v~~l---~~----~g~~vi~GDasd~e~L~~Ag------I~~ 1073 (1158)
+.++|.|.+ . +|..+++.|.++|..|+++++++...+.+ .+ ....++.+|.+|++.++++= ..+
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGV 87 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSC
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 457888864 3 99999999999999999999886543332 22 15788899999988776541 125
Q ss_pred cCEEEEec
Q 001096 1074 ACAAAITL 1081 (1158)
Q Consensus 1074 A~~VIi~t 1081 (1158)
.|.+|-..
T Consensus 88 id~li~~A 95 (266)
T 3oig_A 88 IHGIAHCI 95 (266)
T ss_dssp CCEEEECC
T ss_pred eeEEEEcc
Confidence 67776554
No 332
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=80.29 E-value=1.9 Score=47.85 Aligned_cols=120 Identities=20% Similarity=0.207 Sum_probs=66.1
Q ss_pred ccccccCCcccHHHHHHHHhh-CCCCEE-EEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSE-RLIPFV-ALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e-~g~~Vv-VID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N 1087 (1158)
-++.|+|+|.+|+..++.|.+ .+.+++ ++|.|+++.+. .|.+ +.+.. .+.+. +++|+|++++++...
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~~--~~~~~---~l~~~--~~~DvViiatp~~~h- 78 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQP--FRVVS---DIEQL--ESVDVALVCSPSREV- 78 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCTT--SCEES---SGGGS--SSCCEEEECSCHHHH-
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCCC--cCCHH---HHHhC--CCCCEEEECCCchhh-
Confidence 468899999999999999987 466776 78999887654 4543 11222 22233 689999999987633
Q ss_pred HHHHHHHHhhCCCceEEEEe----cChhh----HHHHHHCCCCeeecCCcHHHHHHHHHHHHh
Q 001096 1088 YRTVWALSKYFPNVKTFVRA----HDIDH----GLNLEKAGATAVVPETLEPSLQLAAAVLAQ 1142 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~IIara----~d~e~----~~~L~~aGAd~VI~p~~~a~~~LA~~vl~~ 1142 (1158)
...+..+.+. ...++..- .+.+. .+..++.|....+.....++..-++..+..
T Consensus 79 ~~~~~~al~a--G~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~~~~p~~~~~~~~i~~ 139 (304)
T 3bio_A 79 ERTALEILKK--GICTADSFDIHDGILALRRSLGDAAGKSGAAAVIASGWDPGSDSVVRTLMQ 139 (304)
T ss_dssp HHHHHHHHTT--TCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHH
T ss_pred HHHHHHHHHc--CCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHHHC
Confidence 3444444444 34666541 22222 233355675544444444444444444443
No 333
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=80.24 E-value=6.1 Score=36.80 Aligned_cols=100 Identities=9% Similarity=-0.063 Sum_probs=58.5
Q ss_pred CCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc--hhhHHHHHHHHhhCCCceEEEE
Q 001096 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP--GANYRTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd--~~Nl~i~l~ar~l~p~~~IIar 1106 (1158)
..|.++|.|+...+.+ .+.|+.++.--.+..+.++.+.-...+.+++-...+ ...+.++..+|+. |.++||+.
T Consensus 10 ~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~-~~~~ii~l 88 (140)
T 3cg0_A 10 PGVLIVEDGRLAAATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAG-CNLPIIFI 88 (140)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHH-SCCCEEEE
T ss_pred ceEEEEECCHHHHHHHHHHHHHCCCeeEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhC-CCCCEEEE
Confidence 4566666655543322 233555442111123333333334578888776553 3456677888887 88888887
Q ss_pred ecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1107 AHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1107 a~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+... +......++|++.++........
T Consensus 89 s~~~~~~~~~~~~~~g~~~~l~kp~~~~~ 117 (140)
T 3cg0_A 89 TSSQDVETFQRAKRVNPFGYLAKPVAADT 117 (140)
T ss_dssp ECCCCHHHHHHHHTTCCSEEEEESCCHHH
T ss_pred ecCCCHHHHHHHHhcCCCEEEeCCCCHHH
Confidence 7654 44567778999988776554444
No 334
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=80.18 E-value=1.9 Score=46.48 Aligned_cols=72 Identities=18% Similarity=0.174 Sum_probs=54.1
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. +.+|+.+++.|.++|++|++++++++..+...+ ....++.+|.+|++.++++= ..+.|++|-
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvn 86 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAH 86 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 35777775 679999999999999999999999887765533 24567889999998876541 124677765
Q ss_pred ec
Q 001096 1080 TL 1081 (1158)
Q Consensus 1080 ~t 1081 (1158)
..
T Consensus 87 nA 88 (263)
T 2a4k_A 87 FA 88 (263)
T ss_dssp GG
T ss_pred CC
Confidence 43
No 335
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=80.14 E-value=17 Score=33.16 Aligned_cols=101 Identities=14% Similarity=0.154 Sum_probs=63.4
Q ss_pred CCCEEEEeCCchHHHHh----hhCCC-CEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHh--hCCCceE
Q 001096 1032 LIPFVALDVRSDRVAIG----RALDL-PVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSK--YFPNVKT 1103 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l----~~~g~-~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~--l~p~~~I 1103 (1158)
...+.++|.++...+.+ ...|+ .+... .+..+.++.+.-...+.+++-..-+. .-+.++..+|+ ..|.+++
T Consensus 4 ~~~ilivdd~~~~~~~l~~~l~~~~~~~v~~~-~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~i 82 (128)
T 1jbe_A 4 ELKFLVVDDFSTMRRIVRNLLKELGFNNVEEA-EDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPV 82 (128)
T ss_dssp TCCEEEECSCHHHHHHHHHHHHHTTCCCEEEE-SSHHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCE
T ss_pred ccEEEEECCCHHHHHHHHHHHHHcCCcEEEee-CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcE
Confidence 45688888887654332 44566 33322 22345566665567888887766543 33567777887 4567777
Q ss_pred EEEecC--hhhHHHHHHCCCCeeecCCcHHHH
Q 001096 1104 FVRAHD--IDHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1104 Iara~d--~e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
++.+.. .+......++|++..+........
T Consensus 83 i~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~ 114 (128)
T 1jbe_A 83 LMVTAEAKKENIIAAAQAGASGYVVKPFTAAT 114 (128)
T ss_dssp EEEESSCCHHHHHHHHHTTCSEEEESSCCHHH
T ss_pred EEEecCccHHHHHHHHHhCcCceeecCCCHHH
Confidence 777654 455667788999988766555544
No 336
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=80.12 E-value=5.5 Score=37.33 Aligned_cols=100 Identities=12% Similarity=0.149 Sum_probs=62.2
Q ss_pred CCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHh--hCCCceEEE
Q 001096 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSK--YFPNVKTFV 1105 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~--l~p~~~IIa 1105 (1158)
..|.++|.|+...+.+ .+.|+.+.... +-.+.++.+.-...+.||+-..-+. .-+.++..+|+ .+|+++||+
T Consensus 7 ~~iLivdd~~~~~~~l~~~l~~~g~~v~~~~-~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~ 85 (140)
T 3grc_A 7 PRILICEDDPDIARLLNLMLEKGGFDSDMVH-SAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVV 85 (140)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTCEEEEEC-SHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEE
T ss_pred CCEEEEcCCHHHHHHHHHHHHHCCCeEEEEC-CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEE
Confidence 4566777666654332 34566544322 2234445444456788877665443 34567778888 678899999
Q ss_pred EecChhhHH---HHHHCCCCeeecCCcHHHH
Q 001096 1106 RAHDIDHGL---NLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1106 ra~d~e~~~---~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.+...+... ...++|++.++........
T Consensus 86 ~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~ 116 (140)
T 3grc_A 86 VSANAREGELEFNSQPLAVSTWLEKPIDENL 116 (140)
T ss_dssp ECTTHHHHHHHHCCTTTCCCEEECSSCCHHH
T ss_pred EecCCChHHHHHHhhhcCCCEEEeCCCCHHH
Confidence 888765544 4467899988776655444
No 337
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=80.10 E-value=1.5 Score=47.12 Aligned_cols=72 Identities=14% Similarity=0.048 Sum_probs=54.1
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+.+.+ ....++.+|.+|++.++++- ..+.|.+|-
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 88 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHI 88 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 35677775 569999999999999999999999988766543 24677889999998776431 125566665
Q ss_pred ec
Q 001096 1080 TL 1081 (1158)
Q Consensus 1080 ~t 1081 (1158)
..
T Consensus 89 nA 90 (255)
T 4eso_A 89 NA 90 (255)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 338
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=80.02 E-value=1.4 Score=47.30 Aligned_cols=73 Identities=12% Similarity=0.071 Sum_probs=55.1
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----hC--CCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~~--g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +.+|..+++.|.+.|..|++++++++..+... .. ...++.+|.+|++.++++= ..+.|+
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 109 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDV 109 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 45777775 67999999999999999999999988765442 22 3567789999999876541 125788
Q ss_pred EEEecC
Q 001096 1077 AAITLD 1082 (1158)
Q Consensus 1077 VIi~t~ 1082 (1158)
+|-..+
T Consensus 110 lv~~Ag 115 (262)
T 3rkr_A 110 LVNNAG 115 (262)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 776554
No 339
>2l0e_A Sodium/hydrogen exchanger 1; transmembrane helix, membrane protein, NHE1; NMR {Homo sapiens}
Probab=79.99 E-value=0.29 Score=37.01 Aligned_cols=29 Identities=17% Similarity=0.285 Sum_probs=26.2
Q ss_pred ChHHHHHHhhccccCcHHHHHHHHHhcCC
Q 001096 710 PGPASIVIGNGLALSSTAVVLQVLQERGE 738 (1158)
Q Consensus 710 s~~~AlllGaiLs~TS~aVVv~iL~el~l 738 (1158)
+|..++++|+++++|+|..+..++++++.
T Consensus 2 ~~~~~llfGAiis~TDpVavlaif~~~~v 30 (33)
T 2l0e_A 2 KKKDNLLFGSIISAVDPVAVLAVFEEIHK 30 (33)
T ss_dssp CCCCCCTTHHHHTTCCHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHccCCChHHHHHHHHHcCC
Confidence 45678899999999999999999999886
No 340
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=79.93 E-value=1.7 Score=46.23 Aligned_cols=72 Identities=13% Similarity=0.058 Sum_probs=53.4
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----hC--CCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~~--g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +.+|+.+++.|.++|++|++++++++..+.+. .. ...++.+|.+|++.++++- ..+.|.
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 87 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDI 87 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45777775 67999999999999999999999988765432 22 3566789999998876541 125777
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 88 lv~nA 92 (247)
T 2jah_A 88 LVNNA 92 (247)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77644
No 341
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=79.92 E-value=17 Score=33.44 Aligned_cols=101 Identities=9% Similarity=0.043 Sum_probs=62.0
Q ss_pred CCEEEEeCCchHHHHh----hhCCCCEEEccCCC-HHHHHhcCc-------cccCEEEEecCCch-hhHHHHHHHHhhC-
Q 001096 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGS-REVLHKVGA-------ERACAAAITLDTPG-ANYRTVWALSKYF- 1098 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~~~g~~vi~GDasd-~e~L~~AgI-------~~A~~VIi~t~dd~-~Nl~i~l~ar~l~- 1098 (1158)
..|.++|.|+...+.+ ...|+.....-..+ .+.++.+.- ...+.+++-..-+. .-+.++..+|+..
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~ 82 (140)
T 1k68_A 3 KKIFLVEDNKADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPT 82 (140)
T ss_dssp CEEEEECCCHHHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTT
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCcc
Confidence 4577777776654433 34455211112222 444444443 56788877766543 3456778888876
Q ss_pred -CCceEEEEecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1099 -PNVKTFVRAHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1099 -p~~~IIara~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
++++||+.+... +......++|++.++........
T Consensus 83 ~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~ 120 (140)
T 1k68_A 83 LKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSANLSQ 120 (140)
T ss_dssp GGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHH
T ss_pred cccccEEEEecCCcHHHHHHHHHhchhheecCCCCHHH
Confidence 678888777654 56677788999998877655544
No 342
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=79.91 E-value=3.9 Score=44.99 Aligned_cols=105 Identities=20% Similarity=0.213 Sum_probs=67.2
Q ss_pred ccccccCCcccHHH-HHHHHhh-CCCCEE-EEeCCchHHHHhhh-CCCCEEEccCCCHHHHHhcCccccCEEEEecCCch
Q 001096 1010 DHIILCGFGRVGQI-IAQLLSE-RLIPFV-ALDVRSDRVAIGRA-LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~-Ia~~L~e-~g~~Vv-VID~d~~~v~~l~~-~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
-++.|+|.|.+|.. .++.|.+ .+.+++ +.|.|+++.+.+.+ .|.+. .+|.+.+.+ +.|+|+++++++.
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~----~~~~~~ll~----~~D~V~i~tp~~~ 78 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMP----FDSIESLAK----KCDCIFLHSSTET 78 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCB----CSCHHHHHT----TCSEEEECCCGGG
T ss_pred CcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHHh----cCCEEEEeCCcHh
Confidence 46889999999996 8888876 466777 78999998876643 46654 355555544 6899999999884
Q ss_pred hhHHHHHHHHhhCCCceEEEE---ecChhhHHHH----HHCCCCeee
Q 001096 1086 ANYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVV 1125 (1158)
Q Consensus 1086 ~Nl~i~l~ar~l~p~~~IIar---a~d~e~~~~L----~~aGAd~VI 1125 (1158)
. ...+..+-+.+ ..|++. +.+.+..+.+ ++.|....+
T Consensus 79 h-~~~~~~al~~g--k~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v 122 (308)
T 3uuw_A 79 H-YEIIKILLNLG--VHVYVDKPLASTVSQGEELIELSTKKNLNLMV 122 (308)
T ss_dssp H-HHHHHHHHHTT--CEEEECSSSSSSHHHHHHHHHHHHHHTCCEEE
T ss_pred H-HHHHHHHHHCC--CcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 4 33333333333 355553 3344443333 444554433
No 343
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=79.91 E-value=6.6 Score=37.51 Aligned_cols=101 Identities=13% Similarity=0.110 Sum_probs=57.9
Q ss_pred CCEEEEeCCchHHHHh----hhC-CCCEEEccCCCHHHHHhcCc-cccCEEEEecCCch-hhHHHHHHHHhhCCCceEEE
Q 001096 1033 IPFVALDVRSDRVAIG----RAL-DLPVYFGDAGSREVLHKVGA-ERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFV 1105 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~~~-g~~vi~GDasd~e~L~~AgI-~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIa 1105 (1158)
..|.++|.|+.....+ .+. |+..+..-.+-.+.+..+.- ...+.+++-..-+. .-+.++..+|+.+|+++||+
T Consensus 4 ~~iLivdd~~~~~~~l~~~L~~~~g~~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 83 (154)
T 2qsj_A 4 TVVLIVDDHHLIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVAL 83 (154)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHCTTEEEEEESSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEEEE
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCCceEEEEecCHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEE
Confidence 3567777776654433 233 55333222222444444443 46788777665433 34667888899999999888
Q ss_pred EecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1106 RAHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1106 ra~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.+... +......++|++.++........
T Consensus 84 ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~ 113 (154)
T 2qsj_A 84 ISGETDHELIRAALEAGADGFIPKSADPQV 113 (154)
T ss_dssp C-----CHHHHHHHHTTCCBBCCTTSCHHH
T ss_pred EeCCCCHHHHHHHHHccCCEEEeCCCCHHH
Confidence 77654 56667778999988776655444
No 344
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=79.85 E-value=1.8 Score=46.96 Aligned_cols=72 Identities=17% Similarity=0.028 Sum_probs=55.2
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+...+ ....++.+|.+|++.++++= ..+.|.+|-
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVn 108 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFN 108 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45677775 569999999999999999999999887765532 36788899999998876541 125677766
Q ss_pred ec
Q 001096 1080 TL 1081 (1158)
Q Consensus 1080 ~t 1081 (1158)
..
T Consensus 109 nA 110 (272)
T 4dyv_A 109 NA 110 (272)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 345
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=79.84 E-value=1.7 Score=47.19 Aligned_cols=72 Identities=11% Similarity=0.048 Sum_probs=54.2
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----hC--CCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~~--g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+... .. ...++.+|.+|++.++++= ..+.|+
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~ 112 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI 112 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45777775 66999999999999999999999988765442 22 5677899999998876541 125777
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 113 lvnnA 117 (276)
T 3r1i_A 113 AVCNA 117 (276)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77654
No 346
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=79.80 E-value=1.4 Score=47.85 Aligned_cols=73 Identities=14% Similarity=0.082 Sum_probs=53.3
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC-----CCCEEEccCCCHHHHHhcC------ccc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL-----DLPVYFGDAGSREVLHKVG------AER 1073 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~-----g~~vi~GDasd~e~L~~Ag------I~~ 1073 (1158)
+.++|.|. +-+|..+++.|.++|..|++++++++..+.. ++. .+.++.+|.+|++.++++= ..+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 91 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGR 91 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 45677765 5699999999999999999999998876543 222 3567789999998766541 125
Q ss_pred cCEEEEecC
Q 001096 1074 ACAAAITLD 1082 (1158)
Q Consensus 1074 A~~VIi~t~ 1082 (1158)
.|++|-...
T Consensus 92 id~lv~nAg 100 (281)
T 3svt_A 92 LHGVVHCAG 100 (281)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 677776544
No 347
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.77 E-value=2.2 Score=45.80 Aligned_cols=73 Identities=10% Similarity=0.057 Sum_probs=54.3
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC---CCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL---DLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~---g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.|. +-+|+.+++.|.++|.+|++++++++..+.. ++. ...++.+|.+|++.++++= ..+.|
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 90 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID 90 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 45677775 5699999999999999999999998876543 222 4567889999998876541 12577
Q ss_pred EEEEecC
Q 001096 1076 AAAITLD 1082 (1158)
Q Consensus 1076 ~VIi~t~ 1082 (1158)
++|-..+
T Consensus 91 ~lvnnAg 97 (262)
T 3pk0_A 91 VVCANAG 97 (262)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7776543
No 348
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=79.76 E-value=1.7 Score=45.94 Aligned_cols=73 Identities=8% Similarity=-0.033 Sum_probs=54.5
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC--CCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~--g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +-+|+.+++.|.++|.+|++++++++..+.+ ++. ...++.+|.+|++.++++- ..+.|.
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDI 85 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45777775 5689999999999999999999998876544 223 4566789999998876541 225678
Q ss_pred EEEecC
Q 001096 1077 AAITLD 1082 (1158)
Q Consensus 1077 VIi~t~ 1082 (1158)
+|-..+
T Consensus 86 li~~Ag 91 (247)
T 3lyl_A 86 LVNNAG 91 (247)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 776553
No 349
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=79.74 E-value=2.5 Score=48.03 Aligned_cols=74 Identities=14% Similarity=0.129 Sum_probs=59.9
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
.+.++|.|.|.+|...++.++..|..|++++.++++.+.+++.|...+. |..+++..+++. ..+|+++-+++.+
T Consensus 195 g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~~-~g~Dvvid~~g~~ 268 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVV-NSRNADEMAAHL-KSFDFILNTVAAP 268 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEE-ETTCHHHHHTTT-TCEEEEEECCSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEe-ccccHHHHHHhh-cCCCEEEECCCCH
Confidence 3568899999999999999999999999999999999988888876554 455666565554 5789988888765
No 350
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=79.61 E-value=4.9 Score=44.95 Aligned_cols=124 Identities=19% Similarity=0.156 Sum_probs=76.7
Q ss_pred cccccCCcccHHHHHHHHhhC-CCCEE-EEeCCchHHHHhh-hCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh
Q 001096 1011 HIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~-g~~Vv-VID~d~~~v~~l~-~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N 1087 (1158)
++.|+|.|.+|...++.|.+. +.+++ +.|.++++.+.+. ..|....+. |.+.+.+. .+.|+|++++++...
T Consensus 4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~---~~~~ll~~--~~~D~V~i~tp~~~h- 77 (344)
T 3ezy_A 4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYK---DPHELIED--PNVDAVLVCSSTNTH- 77 (344)
T ss_dssp EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEES---SHHHHHHC--TTCCEEEECSCGGGH-
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeC---CHHHHhcC--CCCCEEEEcCCCcch-
Confidence 578999999999999999874 56666 6799999887654 446654553 33333332 368999999988743
Q ss_pred HHHHHHHHhhCCCceEEEE---ecChhhHHHH----HHCCCCeeecC--CcHHHHHHHHHHHHh
Q 001096 1088 YRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVPE--TLEPSLQLAAAVLAQ 1142 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~IIar---a~d~e~~~~L----~~aGAd~VI~p--~~~a~~~LA~~vl~~ 1142 (1158)
...+..+-+.+ ..|++. +.+.+....+ ++.|....+.. ...+...-++.++..
T Consensus 78 ~~~~~~al~~g--k~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~ 139 (344)
T 3ezy_A 78 SELVIACAKAK--KHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVEN 139 (344)
T ss_dssp HHHHHHHHHTT--CEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHT
T ss_pred HHHHHHHHhcC--CeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHc
Confidence 33444444443 466665 4455544444 44566544432 234555555555543
No 351
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=79.52 E-value=1.8 Score=49.04 Aligned_cols=111 Identities=14% Similarity=0.116 Sum_probs=69.9
Q ss_pred ccccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhc-CccccCEEEEecCCchh
Q 001096 1008 LQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKV-GAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1008 l~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~A-gI~~A~~VIi~t~dd~~ 1086 (1158)
...+++|+|.|..|+.+++.+++.|++++++|.+++... .......+..|..|.+.+.++ .-.++|+|+...++...
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~--~~~~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e~~~~ 87 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPA--MHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIAT 87 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCGG--GGGSSEEEECCTTCHHHHHHHHHHHCCSEEEECSSCSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCCch--hhhccceEECCCCCHHHHHHHHHHcCCCEEEECCCcCCH
Confidence 356799999999999999999999999999999876532 122234677888888766553 22468888777665433
Q ss_pred hHHHHHHHHhh----CCCceEEEEecChhhHHH-H-HHCCCC
Q 001096 1087 NYRTVWALSKY----FPNVKTFVRAHDIDHGLN-L-EKAGAT 1122 (1158)
Q Consensus 1087 Nl~i~l~ar~l----~p~~~IIara~d~e~~~~-L-~~aGAd 1122 (1158)
+ .+..+.+. .|+...+....|...... + +++|+.
T Consensus 88 ~--~~~~l~~~gi~~~~~~~~~~~~~dK~~~~~~l~~~~gip 127 (391)
T 1kjq_A 88 D--MLIQLEEEGLNVVPCARATKLTMNREGIRRLAAEELQLP 127 (391)
T ss_dssp H--HHHHHHHTTCEESSCHHHHHHHHSHHHHHHHHHTTSCCC
T ss_pred H--HHHHHHhCCCCcCCCHHHHHHhhCHHHHHHHHHHhCCCC
Confidence 3 22223332 233333334444443333 3 466764
No 352
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=79.45 E-value=1.8 Score=46.17 Aligned_cols=73 Identities=11% Similarity=-0.007 Sum_probs=53.6
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhCC--CCEEEccCCCHHHHHhcC------c-cccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RALD--LPVYFGDAGSREVLHKVG------A-ERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~g--~~vi~GDasd~e~L~~Ag------I-~~A~ 1075 (1158)
+.++|.|. +.+|+.+++.|.++|.+|++++++++..+.. +..+ ..++.+|.+|++.++++= . .+.|
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id 89 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN 89 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence 45777775 5799999999999999999999998766543 2223 566789999998776541 1 3577
Q ss_pred EEEEecC
Q 001096 1076 AAAITLD 1082 (1158)
Q Consensus 1076 ~VIi~t~ 1082 (1158)
++|-..+
T Consensus 90 ~lv~~Ag 96 (260)
T 2ae2_A 90 ILVNNAG 96 (260)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7776543
No 353
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=79.40 E-value=2.4 Score=45.15 Aligned_cols=72 Identities=14% Similarity=-0.062 Sum_probs=51.5
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeC-CchHHHHh----hhC--CCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDV-RSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~-d~~~v~~l----~~~--g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.|. |.+|+.+++.|.++|++|+++++ +++..+.. +.. ...++.+|.+|++.++++= ..+.|
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 101 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLD 101 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 45777775 67999999999999999999998 66655432 222 3557789999998876541 12566
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
++|-..
T Consensus 102 ~vi~~A 107 (274)
T 1ja9_A 102 FVMSNS 107 (274)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 766543
No 354
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=79.32 E-value=2.5 Score=45.65 Aligned_cols=88 Identities=17% Similarity=0.182 Sum_probs=59.6
Q ss_pred cccccccCCcccHHHHHHHHhhCCC-CEEEEeCCc-------------------hHHHHh----hhC--CCC--EEEccC
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRS-------------------DRVAIG----RAL--DLP--VYFGDA 1060 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~-------------------~~v~~l----~~~--g~~--vi~GDa 1060 (1158)
..+++|+|.|.+|..+++.|...|+ .++++|.|. .+++.+ ++. +.. .+..+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 107 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL 107 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 4689999999999999999999998 789999875 333332 221 232 233333
Q ss_pred CCHHHHHhcCccccCEEEEecCCchhhHHHHHHHHhhC
Q 001096 1061 GSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYF 1098 (1158)
Q Consensus 1061 sd~e~L~~AgI~~A~~VIi~t~dd~~Nl~i~l~ar~l~ 1098 (1158)
+++.+.+. ++++|.||.++++...-..+...+++.+
T Consensus 108 -~~~~~~~~-~~~~DvVi~~~d~~~~r~~l~~~~~~~~ 143 (251)
T 1zud_1 108 -TGEALKDA-VARADVVLDCTDNMATRQEINAACVALN 143 (251)
T ss_dssp -CHHHHHHH-HHHCSEEEECCSSHHHHHHHHHHHHHTT
T ss_pred -CHHHHHHH-HhcCCEEEECCCCHHHHHHHHHHHHHhC
Confidence 33333332 4578999999988776666666666654
No 355
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=79.31 E-value=3.3 Score=46.15 Aligned_cols=110 Identities=20% Similarity=0.203 Sum_probs=69.6
Q ss_pred ccccccCCcccHHHHHHHHhhCCC-CEEEEeCCchHHHHhh----h------CCCCEEE-ccCCCHHHHHhcCccccCEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGR----A------LDLPVYF-GDAGSREVLHKVGAERACAA 1077 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~~~v~~l~----~------~g~~vi~-GDasd~e~L~~AgI~~A~~V 1077 (1158)
.++.|+|.|.+|..++..|...|+ +|+++|.++++.+... . ....+.. .| + ..+++||.|
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d------~--~a~~~aDiV 76 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDD------Y--ADISGSDVV 76 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESC------G--GGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCC------H--HHhCCCCEE
Confidence 468999999999999999999998 9999999998776421 1 1223332 22 1 135689999
Q ss_pred EEecCCc-----------hhhH----HHHHHHHhhCCCceEEEEecChhh-HHHHHH-CC--CCeeecC
Q 001096 1078 AITLDTP-----------GANY----RTVWALSKYFPNVKTFVRAHDIDH-GLNLEK-AG--ATAVVPE 1127 (1158)
Q Consensus 1078 Ii~t~dd-----------~~Nl----~i~l~ar~l~p~~~IIara~d~e~-~~~L~~-aG--Ad~VI~p 1127 (1158)
|++.+-+ ..|. .++..+.+..|+..++.-.|-... ...+.+ .| ..+|+-.
T Consensus 77 i~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~ 145 (317)
T 2ewd_A 77 IITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQKVSGLPHNKVCGM 145 (317)
T ss_dssp EECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHCCCGGGEEES
T ss_pred EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHhhCCCHHHEEec
Confidence 9998432 1333 345566677887665555543332 233333 33 3466644
No 356
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=79.29 E-value=1.7 Score=46.47 Aligned_cols=72 Identities=11% Similarity=0.078 Sum_probs=49.9
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++.+++..+...+ ..+.++.+|.+|++.++++= ..+.|++|-
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 87 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVN 87 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45777775 569999999999999999999999887655432 25778889999998776541 125777775
Q ss_pred ec
Q 001096 1080 TL 1081 (1158)
Q Consensus 1080 ~t 1081 (1158)
..
T Consensus 88 nA 89 (257)
T 3tpc_A 88 CA 89 (257)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 357
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=79.26 E-value=1 Score=51.92 Aligned_cols=110 Identities=13% Similarity=0.133 Sum_probs=68.0
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
...++|+|.|..|+.+++.+++.|++++++| +++............+.+|..|.+.+.++- +++++++.-..+. +.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a-~~~d~i~~e~e~~--~~ 99 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLA-KTCDVVTAEIEHV--DT 99 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHH-TTCSEEEESSSCS--CH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHH-HhCCEEEECCCCC--CH
Confidence 4579999999999999999999999999999 654322221222367899999999998763 3467654433333 22
Q ss_pred HHHHHHHh---hCCCceEEEEecChhh-HHHHHHCCCC
Q 001096 1089 RTVWALSK---YFPNVKTFVRAHDIDH-GLNLEKAGAT 1122 (1158)
Q Consensus 1089 ~i~l~ar~---l~p~~~IIara~d~e~-~~~L~~aGAd 1122 (1158)
.+...+.+ ..|+...+..+.|... ...++++|+.
T Consensus 100 ~~l~~l~~g~~v~p~~~a~~~~~dK~~~k~~l~~~Gip 137 (403)
T 3k5i_A 100 YALEEVASEVKIEPSWQAIRTIQNKFNQKEHLRKYGIP 137 (403)
T ss_dssp HHHHHHTTTSEESSCHHHHHHHTSHHHHHHHHHTTTCC
T ss_pred HHHHHHHcCCccCcCHHHHHHhcCHHHHHHHHHHCCcC
Confidence 22222222 2233333444444433 2355666654
No 358
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=79.21 E-value=2 Score=47.19 Aligned_cols=74 Identities=14% Similarity=0.118 Sum_probs=53.7
Q ss_pred ccccc-ccccCCcc-cHHHHHHHHhhCCCCEEEEeCCchHHHHhh-hC--CCCEEEccCCCHHHHHhc------CccccC
Q 001096 1007 DLQDH-IILCGFGR-VGQIIAQLLSERLIPFVALDVRSDRVAIGR-AL--DLPVYFGDAGSREVLHKV------GAERAC 1075 (1158)
Q Consensus 1007 ~l~~h-vVIiG~G~-vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~-~~--g~~vi~GDasd~e~L~~A------gI~~A~ 1075 (1158)
+++++ ++|.|.++ +|+.+++.|.+.|..|++.|++++..+... +. ....+.+|.+|++..+++ ...+.|
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 45555 45556544 999999999999999999999999876553 22 456778999999887643 112456
Q ss_pred EEEEe
Q 001096 1076 AAAIT 1080 (1158)
Q Consensus 1076 ~VIi~ 1080 (1158)
.+|--
T Consensus 106 iLVNN 110 (273)
T 4fgs_A 106 VLFVN 110 (273)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 66543
No 359
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=79.15 E-value=3.7 Score=38.46 Aligned_cols=99 Identities=9% Similarity=0.040 Sum_probs=59.8
Q ss_pred CEEEEeCCchHHHHh----hhCC-CCEEEccCCCHHHHHhcCccccCEEEEecCCchh-hHHHHHHHHhhCCCceEEEEe
Q 001096 1034 PFVALDVRSDRVAIG----RALD-LPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-NYRTVWALSKYFPNVKTFVRA 1107 (1158)
Q Consensus 1034 ~VvVID~d~~~v~~l----~~~g-~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~-Nl~i~l~ar~l~p~~~IIara 1107 (1158)
.|.++|.|+...+.+ .+.| +.+..-+ +-.+.++.+.-...+.+++-..-+.. -+.++..+|+..|+++||+.+
T Consensus 16 ~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~-~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s 94 (135)
T 3snk_A 16 QVALFSSDPNFKRDVATRLDALAIYDVRVSE-TDDFLKGPPADTRPGIVILDLGGGDLLGKPGIVEARALWATVPLIAVS 94 (135)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSSEEEEEEC-GGGGGGCCCTTCCCSEEEEEEETTGGGGSTTHHHHHGGGTTCCEEEEE
T ss_pred EEEEEcCCHHHHHHHHHHHhhcCCeEEEEec-cHHHHHHHHhccCCCEEEEeCCCCCchHHHHHHHHHhhCCCCcEEEEe
Confidence 455555555443322 3344 4444221 12234444444567888776655433 346777889999888888877
Q ss_pred cCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1108 HDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1108 ~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
... +......++|++.++........
T Consensus 95 ~~~~~~~~~~~~~~g~~~~l~KP~~~~~ 122 (135)
T 3snk_A 95 DELTSEQTRVLVRMNASDWLHKPLDGKE 122 (135)
T ss_dssp SCCCHHHHHHHHHTTCSEEEESSCCHHH
T ss_pred CCCCHHHHHHHHHcCcHhhccCCCCHHH
Confidence 654 46666778999988877665544
No 360
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=79.12 E-value=1.8 Score=46.13 Aligned_cols=72 Identities=10% Similarity=-0.001 Sum_probs=55.0
Q ss_pred ccccccCCc-ccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGFG-RVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~G-~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|.+ -+|+.+++.|.++|..|++++++++..+.+.+ ....++.+|.+|++.++++= ..+.|++|-
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 89 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVN 89 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 467788864 58999999999999999999999988766533 34677889999998765431 125677776
Q ss_pred ec
Q 001096 1080 TL 1081 (1158)
Q Consensus 1080 ~t 1081 (1158)
..
T Consensus 90 ~A 91 (261)
T 3n74_A 90 NA 91 (261)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 361
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=79.09 E-value=6.9 Score=44.09 Aligned_cols=85 Identities=11% Similarity=0.096 Sum_probs=54.6
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh--
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-- 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N-- 1087 (1158)
..+.|+|+|.+|+.+++.|...|.+|++.|++++..+. ..-...-.+-.+.+ .++|.|++.++....+
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~~~~~~~~l~ell-----~~aDvV~l~lPlt~~t~~ 207 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADH-----FHETVAFTATADAL-----ATANFIVNALPLTPTTHH 207 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTT-----CSEEEEGGGCHHHH-----HHCSEEEECCCCCGGGTT
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHh-----HhhccccCCHHHHH-----hhCCEEEEcCCCchHHHH
Confidence 46889999999999999999999999999988764322 22222211223333 4689999988754322
Q ss_pred HHHHHHHHhhCCCceEE
Q 001096 1088 YRTVWALSKYFPNVKTF 1104 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~II 1104 (1158)
+.-...+....|...+|
T Consensus 208 li~~~~l~~mk~gailI 224 (324)
T 3evt_A 208 LFSTELFQQTKQQPMLI 224 (324)
T ss_dssp CBSHHHHHTCCSCCEEE
T ss_pred hcCHHHHhcCCCCCEEE
Confidence 22233444555554443
No 362
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=79.09 E-value=3.7 Score=45.97 Aligned_cols=93 Identities=16% Similarity=0.154 Sum_probs=61.1
Q ss_pred ccccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHH----HhhhCC---CCE-EEccCCCHHHHHhcCccccCEEEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVA----IGRALD---LPV-YFGDAGSREVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~----~l~~~g---~~v-i~GDasd~e~L~~AgI~~A~~VIi 1079 (1158)
.++.|+|.|.+|..++-.|...+. +++++|.|+++.+ .+.+.- .++ +.. .+ ...+++||.||+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~--~~-----~~a~~~aDvVii 80 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA--GD-----YSDVKDCDVIVV 80 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----C-----GGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE--CC-----HHHhCCCCEEEE
Confidence 468999999999999999998887 8999999987643 222210 122 221 12 223789999999
Q ss_pred ecCCch-----------hh----HHHHHHHHhhCCCceEEEEecCh
Q 001096 1080 TLDTPG-----------AN----YRTVWALSKYFPNVKTFVRAHDI 1110 (1158)
Q Consensus 1080 ~t~dd~-----------~N----l~i~l~ar~l~p~~~IIara~d~ 1110 (1158)
+.+-+. .| ..++..+.+..|+..++.. .++
T Consensus 81 ~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~-tNP 125 (318)
T 1y6j_A 81 TAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV-SNP 125 (318)
T ss_dssp CCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC-SSS
T ss_pred cCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe-cCc
Confidence 887642 33 3456677778899888885 554
No 363
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=79.03 E-value=1.3 Score=49.55 Aligned_cols=68 Identities=16% Similarity=0.077 Sum_probs=49.5
Q ss_pred cccccCCcccHHHHHHHHhhCC-------CCEEEEeCCch-----HHHHhhhCCC------------CEEEccCCCHHHH
Q 001096 1011 HIILCGFGRVGQIIAQLLSERL-------IPFVALDVRSD-----RVAIGRALDL------------PVYFGDAGSREVL 1066 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g-------~~VvVID~d~~-----~v~~l~~~g~------------~vi~GDasd~e~L 1066 (1158)
++.|+|.|.+|..++..|.+.| ++|+++|.+++ +.+.+.+.+. .+..- ++.+.
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~- 86 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAV--PDVVQ- 86 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEE--SSHHH-
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEE--cCHHH-
Confidence 6899999999999999999988 89999999988 7776654221 11110 22221
Q ss_pred HhcCccccCEEEEecCCc
Q 001096 1067 HKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1067 ~~AgI~~A~~VIi~t~dd 1084 (1158)
. ++++|+||+++.+.
T Consensus 87 -~--~~~aD~Vilav~~~ 101 (354)
T 1x0v_A 87 -A--AEDADILIFVVPHQ 101 (354)
T ss_dssp -H--HTTCSEEEECCCGG
T ss_pred -H--HcCCCEEEEeCCHH
Confidence 1 34799999999875
No 364
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=79.00 E-value=1.6 Score=50.38 Aligned_cols=111 Identities=21% Similarity=0.259 Sum_probs=73.2
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcC-ccccCEEEEecCCchhh
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVG-AERACAAAITLDTPGAN 1087 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~Ag-I~~A~~VIi~t~dd~~N 1087 (1158)
..+++|+|.|..|+.+++.+++.|++++++|.+++..... .-...+..|..|.+.+.++- -.+.|+|+...++...+
T Consensus 19 ~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~--~ad~~~~~~~~d~~~l~~~~~~~~~d~V~~~~e~~~~~ 96 (433)
T 2dwc_A 19 AQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYANAPAMQ--VAHRSYVGNMMDKDFLWSVVEREKPDAIIPEIEAINLD 96 (433)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTTCHHHH--HSSEEEESCTTCHHHHHHHHHHHCCSEEEECSSCSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhh--hcceEEECCCCCHHHHHHHHHHcCCCEEEECcccCCHH
Confidence 4579999999999999999999999999999987653221 12346778888887765542 24788887777654332
Q ss_pred HHHHHHHHhh----CCCceEEEEecChhhHH-HH-HHCCCCe
Q 001096 1088 YRTVWALSKY----FPNVKTFVRAHDIDHGL-NL-EKAGATA 1123 (1158)
Q Consensus 1088 l~i~l~ar~l----~p~~~IIara~d~e~~~-~L-~~aGAd~ 1123 (1158)
.+..+.+. .|+...+..+.|..... .+ +++|+..
T Consensus 97 --~~~~l~~~gi~~~~~~~~~~~~~dK~~~k~~l~~~~gip~ 136 (433)
T 2dwc_A 97 --ALFEFEKDGYFVVPNARATWIAMHRERLRETLVKEAKVPT 136 (433)
T ss_dssp --HHHHHHHTTCCBSSCHHHHHHHHCHHHHHHHHHHTSCCCC
T ss_pred --HHHHHHhcCCeeCCCHHHHHHhhCHHHHHHHHHHhcCCCC
Confidence 22233332 24444455555655444 44 5778653
No 365
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=78.98 E-value=13 Score=34.17 Aligned_cols=95 Identities=4% Similarity=-0.063 Sum_probs=56.3
Q ss_pred CCCEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCcc-ccCEEEEecCCch--hhHHHHHHHHhhCCCceEE
Q 001096 1032 LIPFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAE-RACAAAITLDTPG--ANYRTVWALSKYFPNVKTF 1104 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~-~A~~VIi~t~dd~--~Nl~i~l~ar~l~p~~~II 1104 (1158)
...+.++|.|+...+. +...|+.+... .+..+.++.+.-. ..+.+++-..-+. .-+.++..+|+.+|+++||
T Consensus 5 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii 83 (132)
T 2rdm_A 5 AVTILLADDEAILLLDFESTLTDAGFLVTAV-SSGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIV 83 (132)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHTTCEEEEE-SSHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEE
T ss_pred CceEEEEcCcHHHHHHHHHHHHHcCCEEEEE-CCHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 3467777777654432 24456665542 2224445544433 6788887765543 4467888899999999998
Q ss_pred EEecChhhHHHHHHCCCC-eeecC
Q 001096 1105 VRAHDIDHGLNLEKAGAT-AVVPE 1127 (1158)
Q Consensus 1105 ara~d~e~~~~L~~aGAd-~VI~p 1127 (1158)
+.+...+.........++ .+.-|
T Consensus 84 ~~s~~~~~~~~~~~~~~~~~l~kP 107 (132)
T 2rdm_A 84 YISGHAALEWASNGVPDSIILEKP 107 (132)
T ss_dssp EEESSCCTTHHHHSCTTCEEEESS
T ss_pred EEeCCccHHHHHhhcCCcceEeCC
Confidence 888766544444333333 34444
No 366
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=78.92 E-value=1.8 Score=48.67 Aligned_cols=86 Identities=12% Similarity=0.074 Sum_probs=56.8
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeC-CchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDV-RSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY 1088 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~-d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl 1088 (1158)
..+.|+|+|.+|+.+++.|...|.+|+++|+ +++.. ...+.|... ..+.+.+- .++|.|++.++....+.
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~----~~~l~ell----~~aDvVil~~p~~~~t~ 217 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEASYQATF----HDSLDSLL----SVSQFFSLNAPSTPETR 217 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHHTCEE----CSSHHHHH----HHCSEEEECCCCCTTTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhhhcCcEE----cCCHHHHH----hhCCEEEEeccCchHHH
Confidence 4588999999999999999999999999999 87663 344456532 12333222 36899999998653322
Q ss_pred HH--HHHHHhhCCCceEE
Q 001096 1089 RT--VWALSKYFPNVKTF 1104 (1158)
Q Consensus 1089 ~i--~l~ar~l~p~~~II 1104 (1158)
.+ ...+....|+..+|
T Consensus 218 ~~i~~~~l~~mk~gailI 235 (320)
T 1gdh_A 218 YFFNKATIKSLPQGAIVV 235 (320)
T ss_dssp TCBSHHHHTTSCTTEEEE
T ss_pred hhcCHHHHhhCCCCcEEE
Confidence 11 22334455554333
No 367
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=78.84 E-value=2.5 Score=47.67 Aligned_cols=105 Identities=17% Similarity=0.157 Sum_probs=68.8
Q ss_pred ccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHHHH
Q 001096 1012 IILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTV 1091 (1158)
Q Consensus 1012 vVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~i~ 1091 (1158)
++|+|.|..|+.+++.+++.|++++++|.+++.... ..... +.+|..|.+.+.+.- ++.|.|+...++.. ...+
T Consensus 2 iliiG~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~--~~a~~-~~~~~~d~~~l~~~~-~~~d~v~~~~e~~~--~~~~ 75 (369)
T 3aw8_A 2 IGILGGGQLGRMLALAGYPLGLSFRFLDPSPEACAG--QVGEL-VVGEFLDEGALLRFA-EGLALVTYEFENVP--VEAA 75 (369)
T ss_dssp EEEECCSHHHHHHHHHHTTBTCCEEEEESCTTCGGG--GTSEE-EECCTTCHHHHHHHH-TTCSEEEECCTTCC--HHHH
T ss_pred EEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCChHH--Hhhce-EecCCCCHHHHHHHH-hCCCEEEECCCCcC--HHHH
Confidence 689999999999999999999999999988654211 11112 578999988877654 67888876665542 3333
Q ss_pred HHHHhh---CCCceEEEEecChh-hHHHHHHCCCC
Q 001096 1092 WALSKY---FPNVKTFVRAHDID-HGLNLEKAGAT 1122 (1158)
Q Consensus 1092 l~ar~l---~p~~~IIara~d~e-~~~~L~~aGAd 1122 (1158)
..+.+. .|+...+....|.. ..+.+++.|+.
T Consensus 76 ~~l~~~g~~g~~~~~~~~~~dK~~~k~~l~~~gip 110 (369)
T 3aw8_A 76 RRLEGRLPLYPPAKALEVAQDRLREKTFFQGLGVP 110 (369)
T ss_dssp HHHHHHSCBSSCHHHHHHHTCHHHHHHHHHHHTCC
T ss_pred HHHHHcCCcCCCHHHHHHhcCHHHHHHHHHHCCCC
Confidence 333333 33444444455543 34455667755
No 368
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=78.83 E-value=2.2 Score=47.47 Aligned_cols=72 Identities=19% Similarity=0.159 Sum_probs=52.7
Q ss_pred ccccccCC-cccHHHHHHHHhhCC-CCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCcc----ccCEEEEecC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERL-IPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAE----RACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g-~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~----~A~~VIi~t~ 1082 (1158)
..++|.|. |-+|..+++.|.+.| ++|+++++++.......-.+.. +.||.++++.++++--. ++|+||-+..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~ 124 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 124 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhhcccCCCCEEEECCc
Confidence 46888887 999999999999999 9999999876542111111334 77999999888776322 6888887764
No 369
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=78.83 E-value=8 Score=40.67 Aligned_cols=101 Identities=12% Similarity=0.143 Sum_probs=63.4
Q ss_pred CCEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh-hHHHHHHHHhhCCCceEEEEe
Q 001096 1033 IPFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-NYRTVWALSKYFPNVKTFVRA 1107 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~-Nl~i~l~ar~l~p~~~IIara 1107 (1158)
..|.++|.|+...+. +...|+.+... .+-.+.++.+.-...|.+++-..-+.. -+.++..+|+.+|+++||+.+
T Consensus 24 ~~ILivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt 102 (250)
T 3r0j_A 24 ARVLVVDDEANIVELLSVSLKFQGFEVYTA-TNGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLT 102 (250)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEE-SSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEE
T ss_pred ceEEEEECCHHHHHHHHHHHHHCCCEEEEE-CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEE
Confidence 356666666554332 23445555432 122344444444567888887765543 367888899999988888877
Q ss_pred cCh--hhHHHHHHCCCCeeecCCcHHHHH
Q 001096 1108 HDI--DHGLNLEKAGATAVVPETLEPSLQ 1134 (1158)
Q Consensus 1108 ~d~--e~~~~L~~aGAd~VI~p~~~a~~~ 1134 (1158)
... +......++||+..+.........
T Consensus 103 ~~~~~~~~~~~~~~Ga~~yl~Kp~~~~~L 131 (250)
T 3r0j_A 103 ARDSLQDKIAGLTLGGDDYVTKPFSLEEV 131 (250)
T ss_dssp CSTTHHHHHHHHTSTTCEEEESSCCHHHH
T ss_pred CCCCHHHHHHHHHcCCcEEEeCCCCHHHH
Confidence 654 455667789999888776665553
No 370
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=78.79 E-value=2.2 Score=46.48 Aligned_cols=72 Identities=11% Similarity=0.088 Sum_probs=54.4
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. +-+|+.+++.|.+.|..|++++.+++..+...+ ....++.+|.+|++.++++= ..+.|++|-
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 109 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVA 109 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35677775 569999999999999999999999887765532 35778899999998765431 125677765
Q ss_pred ec
Q 001096 1080 TL 1081 (1158)
Q Consensus 1080 ~t 1081 (1158)
..
T Consensus 110 nA 111 (277)
T 3gvc_A 110 NA 111 (277)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 371
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=78.77 E-value=2.3 Score=46.25 Aligned_cols=73 Identities=14% Similarity=0.049 Sum_probs=54.3
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----h-------CCCCEEEccCCCHHHHHhcCc------
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----A-------LDLPVYFGDAGSREVLHKVGA------ 1071 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~-------~g~~vi~GDasd~e~L~~AgI------ 1071 (1158)
+.++|.| .|.+|+.+++.|.++|++|++++++++..+... . ..+.++.+|.+|++.++++=-
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 98 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF 98 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence 4567776 467999999999999999999999987665332 1 245678899999988766421
Q ss_pred cccCEEEEecC
Q 001096 1072 ERACAAAITLD 1082 (1158)
Q Consensus 1072 ~~A~~VIi~t~ 1082 (1158)
.+.|+||-..+
T Consensus 99 g~id~li~~Ag 109 (303)
T 1yxm_A 99 GKINFLVNNGG 109 (303)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 25788876554
No 372
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=78.71 E-value=4.3 Score=46.27 Aligned_cols=87 Identities=18% Similarity=0.221 Sum_probs=58.2
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh--
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-- 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N-- 1087 (1158)
..+-|+|+|.+|+.+++.|+..|.+|++.|+++. .+...+.|+... .+.+.+ +.++|.|++.++....+
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~~~~~g~~~~----~~l~el----l~~aDiV~l~~Plt~~t~~ 231 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENS-KERARADGFAVA----ESKDAL----FEQSDVLSVHLRLNDETRS 231 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHH-HHHHHHTTCEEC----SSHHHH----HHHCSEEEECCCCSTTTTT
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCC-HHHHHhcCceEe----CCHHHH----HhhCCEEEEeccCcHHHHH
Confidence 4588999999999999999999999999998863 344556676422 233333 24689999988754322
Q ss_pred HHHHHHHHhhCCCceEEE
Q 001096 1088 YRTVWALSKYFPNVKTFV 1105 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~IIa 1105 (1158)
+.-...+....|...+|-
T Consensus 232 li~~~~l~~mk~gailIN 249 (352)
T 3gg9_A 232 IITVADLTRMKPTALFVN 249 (352)
T ss_dssp CBCHHHHTTSCTTCEEEE
T ss_pred hhCHHHHhhCCCCcEEEE
Confidence 222334455556544443
No 373
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=78.65 E-value=2.1 Score=47.07 Aligned_cols=72 Identities=8% Similarity=-0.007 Sum_probs=52.7
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC---CCCEEEccCCCHHHHHhc------CccccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL---DLPVYFGDAGSREVLHKV------GAERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~---g~~vi~GDasd~e~L~~A------gI~~A~ 1075 (1158)
+.++|.|. +-+|..+++.|.+.|..|++++++++..+.. ++. ...++.+|.+|++.++++ ...+.|
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 121 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD 121 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 35677775 5699999999999999999999998776543 222 356788999999876543 112567
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
++|-..
T Consensus 122 ~lvnnA 127 (293)
T 3rih_A 122 VVCANA 127 (293)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 776654
No 374
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=78.64 E-value=5.6 Score=44.64 Aligned_cols=124 Identities=13% Similarity=0.145 Sum_probs=77.4
Q ss_pred ccccccCCcccHHHHHHHHhhC-CCCEE-EEeCCchHHHHhh-hCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~-g~~Vv-VID~d~~~v~~l~-~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
-++.|+|.|.+|...++.|.+. +.+++ +.|.|+++.+... ..|.+. .+|.+.+-+ -.+.|+|+++++++..
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~~l~--~~~~D~V~i~tp~~~h 79 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG----DATMEALLA--REDVEMVIITVPNDKH 79 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC----CSSHHHHHH--CSSCCEEEECSCTTSH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHhc--CCCCCEEEEeCChHHH
Confidence 4689999999999999999876 67765 7799999887664 346654 345444443 2368999999998744
Q ss_pred hHHHHHHHHhhCCCceEEEE---ecChhhHHHH----HHCCCCeeecC--CcHHHHHHHHHHHHh
Q 001096 1087 NYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVPE--TLEPSLQLAAAVLAQ 1142 (1158)
Q Consensus 1087 Nl~i~l~ar~l~p~~~IIar---a~d~e~~~~L----~~aGAd~VI~p--~~~a~~~LA~~vl~~ 1142 (1158)
...+..+-+.+ ..|++. +.+.+..+.+ ++.|....+.. ...+...-++.++..
T Consensus 80 -~~~~~~al~~g--k~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~ 141 (354)
T 3db2_A 80 -AEVIEQCARSG--KHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDT 141 (354)
T ss_dssp -HHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHT
T ss_pred -HHHHHHHHHcC--CEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhc
Confidence 33334444443 456653 3444444444 45566544432 334555555555544
No 375
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=78.60 E-value=3.6 Score=43.20 Aligned_cols=73 Identities=11% Similarity=0.038 Sum_probs=53.5
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----h---CCCCEEEccC--CCHHHHHhcC------ccc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----A---LDLPVYFGDA--GSREVLHKVG------AER 1073 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~---~g~~vi~GDa--sd~e~L~~Ag------I~~ 1073 (1158)
+.++|.|. +.+|+.+++.|.++|..|++++++++..+... . ....++..|. ++++.++++- ..+
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~ 94 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGR 94 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCC
Confidence 45777775 67999999999999999999999988765442 2 3456777888 8887765431 126
Q ss_pred cCEEEEecC
Q 001096 1074 ACAAAITLD 1082 (1158)
Q Consensus 1074 A~~VIi~t~ 1082 (1158)
.|++|-..+
T Consensus 95 id~lv~nAg 103 (247)
T 3i1j_A 95 LDGLLHNAS 103 (247)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 778776543
No 376
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=78.51 E-value=2.9 Score=46.49 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=65.1
Q ss_pred cccccccCCcccHHHHHHHHhhCCC-CEEEEeCCc------------------hHHHHhh----hC--C--CCEEEccCC
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRS------------------DRVAIGR----AL--D--LPVYFGDAG 1061 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~------------------~~v~~l~----~~--g--~~vi~GDas 1061 (1158)
..+|+|+|.|.+|..+++.|...|+ .++++|.|. .+++.+. +. + +..+..+.+
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~ 115 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNIT 115 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCC
Confidence 4689999999999999999999997 799999987 4554332 21 2 344455666
Q ss_pred CHHHHHhc-------C---ccccCEEEEecCCchhhHHHHHHHHhhC
Q 001096 1062 SREVLHKV-------G---AERACAAAITLDTPGANYRTVWALSKYF 1098 (1158)
Q Consensus 1062 d~e~L~~A-------g---I~~A~~VIi~t~dd~~Nl~i~l~ar~l~ 1098 (1158)
+.+.+... . ..++|.||-++++...-..+....++.+
T Consensus 116 ~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~ 162 (292)
T 3h8v_A 116 TVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELG 162 (292)
T ss_dssp SHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhC
Confidence 65554432 1 2589999999999877777777777665
No 377
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=78.50 E-value=1.4 Score=47.88 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=51.6
Q ss_pred ccccC-CcccHHHHHHHHhhC--CCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCc-cccCEEEEecC
Q 001096 1012 IILCG-FGRVGQIIAQLLSER--LIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGA-ERACAAAITLD 1082 (1158)
Q Consensus 1012 vVIiG-~G~vG~~Ia~~L~e~--g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI-~~A~~VIi~t~ 1082 (1158)
++|.| .|-+|..+++.|.+. |++|++++.++... .+..++.||.+|++.++++=- .+.|+||-+..
T Consensus 2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~ 71 (317)
T 3ajr_A 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-----GGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAG 71 (317)
T ss_dssp EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-----TTCCEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-----cCceEEEecCCCHHHHHHHHhhcCCcEEEECCc
Confidence 67777 589999999999988 89999999765432 167899999999998876521 16888887664
No 378
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=78.46 E-value=1.7 Score=47.86 Aligned_cols=72 Identities=10% Similarity=0.072 Sum_probs=53.1
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC-----CCCEEEccCCCHHHHHhcC------ccc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL-----DLPVYFGDAGSREVLHKVG------AER 1073 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~-----g~~vi~GDasd~e~L~~Ag------I~~ 1073 (1158)
+.++|.|. +.+|+.+++.|.++|.+|++++++++..+.. .+. ...++.+|.+|++.++++= ..+
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 106 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK 106 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 45677765 5699999999999999999999998776543 222 3567889999998776541 125
Q ss_pred cCEEEEec
Q 001096 1074 ACAAAITL 1081 (1158)
Q Consensus 1074 A~~VIi~t 1081 (1158)
.|++|-..
T Consensus 107 iD~lvnnA 114 (297)
T 1xhl_A 107 IDILVNNA 114 (297)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 67777644
No 379
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=78.44 E-value=1.4 Score=49.44 Aligned_cols=73 Identities=18% Similarity=0.190 Sum_probs=53.6
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchH-----HHHh-------hhCCCCEEEccCCCHHHHHhcCcc-ccC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDR-----VAIG-------RALDLPVYFGDAGSREVLHKVGAE-RAC 1075 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~-----v~~l-------~~~g~~vi~GDasd~e~L~~AgI~-~A~ 1075 (1158)
..++|.| .|-+|..+++.|.+.|++|++++++++. .+.+ ...++.++.||.+|++.+.++=-+ +.|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 104 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 104 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence 4588888 5889999999999999999999987643 2222 123577889999999888765211 368
Q ss_pred EEEEecC
Q 001096 1076 AAAITLD 1082 (1158)
Q Consensus 1076 ~VIi~t~ 1082 (1158)
+||-+..
T Consensus 105 ~vih~A~ 111 (375)
T 1t2a_A 105 EIYNLGA 111 (375)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 8877654
No 380
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=78.41 E-value=1.5 Score=49.24 Aligned_cols=69 Identities=9% Similarity=0.124 Sum_probs=56.9
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
.+.++|.|.|.+|...++.++..|.+|++++.++++.+.+++.|...++ .+++.+++ .+|+++-+++.+
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~~~~~----~~D~vid~~g~~ 245 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY---TDPKQCKE----ELDFIISTIPTH 245 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE---SSGGGCCS----CEEEEEECCCSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec---CCHHHHhc----CCCEEEECCCcH
Confidence 3568889999999999999999999999999999999999999988777 34444433 678887777766
No 381
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=78.40 E-value=1.7 Score=48.42 Aligned_cols=73 Identities=16% Similarity=0.078 Sum_probs=54.7
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh----C----CCCEEEccCCCHHHHHhcC------cccc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA----L----DLPVYFGDAGSREVLHKVG------AERA 1074 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~----~----g~~vi~GDasd~e~L~~Ag------I~~A 1074 (1158)
+.++|.|. |-+|..+++.|.++|+.|++++++++..+...+ . .+.++.+|.+|++.++++- ....
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPV 88 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence 35777775 679999999999999999999999887654422 1 4677889999999876541 1245
Q ss_pred CEEEEecC
Q 001096 1075 CAAAITLD 1082 (1158)
Q Consensus 1075 ~~VIi~t~ 1082 (1158)
|++|-..+
T Consensus 89 d~lv~nAg 96 (319)
T 3ioy_A 89 SILCNNAG 96 (319)
T ss_dssp EEEEECCC
T ss_pred CEEEECCC
Confidence 77766554
No 382
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=78.40 E-value=1.5 Score=48.03 Aligned_cols=104 Identities=10% Similarity=-0.033 Sum_probs=65.5
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC-CCCEEEccCCCHHHHHhcCccccCEEEEecCCchh-h
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-N 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~-g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~-N 1087 (1158)
..++|+|.|.+|+.++..|.+.|.+|+++|+++++.+.+.+. |..+ -+ + +.+ -++++|.||.+++.... +
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~--~---~~~-~~~~aDiVi~atp~~~~~~ 201 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN--S---PEE-VIDKVQVIVNTTSVGLKDE 201 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS--C---GGG-TGGGCSEEEECSSTTSSTT
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh--h---HHh-hhcCCCEEEEeCCCCCCCC
Confidence 468999999999999999999999999999999988766543 4221 11 1 111 24689999999987632 1
Q ss_pred --HHHHHHHHhhCCCceEEEEec-ChhhHHHHHHCCCCe
Q 001096 1088 --YRTVWALSKYFPNVKTFVRAH-DIDHGLNLEKAGATA 1123 (1158)
Q Consensus 1088 --l~i~l~ar~l~p~~~IIara~-d~e~~~~L~~aGAd~ 1123 (1158)
-.+ ....+.|+..++-.+. .....+..++.|+..
T Consensus 202 ~~~~i--~~~~l~~g~~viDv~~~~t~ll~~a~~~g~~~ 238 (275)
T 2hk9_A 202 DPEIF--NYDLIKKDHVVVDIIYKETKLLKKAKEKGAKL 238 (275)
T ss_dssp CCCSS--CGGGCCTTSEEEESSSSCCHHHHHHHHTTCEE
T ss_pred CCCCC--CHHHcCCCCEEEEcCCChHHHHHHHHHCcCEE
Confidence 011 1122344433332222 122345556678753
No 383
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=78.38 E-value=1.4 Score=51.02 Aligned_cols=71 Identities=15% Similarity=0.238 Sum_probs=52.4
Q ss_pred cccccccCCcccHHHHHHHHhhCCC-CEEEEeCCchHHH-HhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVA-IGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~~~v~-~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
...++|+|.|.+|+.+++.|...|. +|+++|+++++.+ .+.+.|..++ +..+...+ +.++|.||.+++.+.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~--~~~~l~~~----l~~aDvVi~at~~~~ 239 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV--RFDELVDH----LARSDVVVSATAAPH 239 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC--CGGGHHHH----HHTCSEEEECCSSSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCcee--cHHhHHHH----hcCCCEEEEccCCCC
Confidence 3569999999999999999999998 8999999998874 3444565433 22222211 247999999998754
No 384
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=78.30 E-value=1.8 Score=51.55 Aligned_cols=66 Identities=17% Similarity=0.101 Sum_probs=49.1
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCC
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
.+.++|+|+|.+|+.+++.|...|.+|++.|.++.+...+...|+.+ .+.+ .-...+|.++.+++.
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv-----~~le----e~~~~aDvVi~atG~ 330 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQV-----LTLE----DVVSEADIFVTTTGN 330 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-----CCGG----GTTTTCSEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCcc-----CCHH----HHHHhcCEEEeCCCC
Confidence 35689999999999999999999999999999998877776666533 2211 113357777666554
No 385
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=78.29 E-value=3 Score=45.31 Aligned_cols=73 Identities=12% Similarity=0.051 Sum_probs=54.3
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh-------hCCCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-------ALDLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~-------~~g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++++..+... ...+.++.+|.+|++.++++= ..+.|
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 106 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN 106 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 45777764 67999999999999999999999987765432 234677889999998776541 12458
Q ss_pred EEEEecC
Q 001096 1076 AAAITLD 1082 (1158)
Q Consensus 1076 ~VIi~t~ 1082 (1158)
++|-..+
T Consensus 107 ~li~~Ag 113 (302)
T 1w6u_A 107 IVINNAA 113 (302)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8776554
No 386
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=78.25 E-value=2.9 Score=45.83 Aligned_cols=72 Identities=7% Similarity=-0.112 Sum_probs=53.6
Q ss_pred ccccccCCc---ccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----h-CCCCEEEccCCCHHHHHhcCc------cccC
Q 001096 1010 DHIILCGFG---RVGQIIAQLLSERLIPFVALDVRSDRVAIGR----A-LDLPVYFGDAGSREVLHKVGA------ERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~G---~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~-~g~~vi~GDasd~e~L~~AgI------~~A~ 1075 (1158)
+.++|.|.+ -+|+.+++.|.++|..|++++++++..+.+. . ....++.+|.+|++.++++=- .+.|
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 110 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSLD 110 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888875 8999999999999999999999975433321 1 245678899999988765411 2568
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
++|-..
T Consensus 111 ~lVnnA 116 (296)
T 3k31_A 111 FVVHAV 116 (296)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 877654
No 387
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=78.24 E-value=2 Score=45.83 Aligned_cols=72 Identities=11% Similarity=0.008 Sum_probs=53.3
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhCC--CCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RALD--LPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~g--~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +.+|+.+++.|.++|.+|++++++++..+.. +..+ ..++.+|.+|++.++++= ..+.|+
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 82 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45677774 6799999999999999999999998765443 2223 567789999998776541 126788
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 83 lv~nA 87 (256)
T 1geg_A 83 IVNNA 87 (256)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77654
No 388
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=78.23 E-value=3.4 Score=43.20 Aligned_cols=72 Identities=10% Similarity=0.090 Sum_probs=54.8
Q ss_pred cccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhc--Ccc-ccCEEEEecC
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKV--GAE-RACAAAITLD 1082 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~A--gI~-~A~~VIi~t~ 1082 (1158)
.++|.|. +.+|+.+++.|.++|..|++++++++..+...+ ..+.++.+|.++++.++++ .+. ..|.+|-..+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag 81 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG 81 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence 4667665 569999999999999999999999998876644 3578899999999887664 221 2267665543
No 389
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=78.21 E-value=1.8 Score=45.98 Aligned_cols=72 Identities=15% Similarity=0.002 Sum_probs=53.8
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++++..+...+ ..+.++.+|.+|++.++++= ..+.|++|-
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~ 92 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVN 92 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 45777764 679999999999999999999999876654432 24677889999998876541 125777776
Q ss_pred ec
Q 001096 1080 TL 1081 (1158)
Q Consensus 1080 ~t 1081 (1158)
..
T Consensus 93 ~A 94 (265)
T 2o23_A 93 CA 94 (265)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 390
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=78.10 E-value=4.9 Score=37.94 Aligned_cols=100 Identities=7% Similarity=-0.002 Sum_probs=63.7
Q ss_pred CCCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCc-cccCEEEEecCCc--hhhHHHHHHHHhhCCCceEE
Q 001096 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGA-ERACAAAITLDTP--GANYRTVWALSKYFPNVKTF 1104 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI-~~A~~VIi~t~dd--~~Nl~i~l~ar~l~p~~~II 1104 (1158)
+..|.++|.|+...+.+ .+.|+.+..- .+..+.++.+.- ...+.+++-..-+ ..-+.++..+|+. |+++||
T Consensus 5 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~-~~~~ii 82 (140)
T 3h5i_A 5 DKKILIVEDSKFQAKTIANILNKYGYTVEIA-LTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQI-SELPVV 82 (140)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTCEEEEE-SSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHH-CCCCEE
T ss_pred CcEEEEEeCCHHHHHHHHHHHHHcCCEEEEe-cChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhC-CCCCEE
Confidence 45677777777655433 4457666532 233445554433 4678888877653 4556777788876 788888
Q ss_pred EEecChh--hHHHHHHCCCCeeecCCcHHHH
Q 001096 1105 VRAHDID--HGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1105 ara~d~e--~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+.+...+ ......++|++.++........
T Consensus 83 ~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~ 113 (140)
T 3h5i_A 83 FLTAHTEPAVVEKIRSVTAYGYVMKSATEQV 113 (140)
T ss_dssp EEESSSSCCCCGGGGGSCEEEEEETTCCHHH
T ss_pred EEECCCCHHHHHHHHhCCCcEEEeCCCCHHH
Confidence 8776544 5566778899988876655444
No 391
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=78.09 E-value=2 Score=46.76 Aligned_cols=73 Identities=19% Similarity=0.233 Sum_probs=52.5
Q ss_pred ccccc-ccccCCc-ccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhCCC--CEEEccCCCHHHHHhc------Ccc
Q 001096 1007 DLQDH-IILCGFG-RVGQIIAQLLSERLIPFVALDVRSDRVAIG----RALDL--PVYFGDAGSREVLHKV------GAE 1072 (1158)
Q Consensus 1007 ~l~~h-vVIiG~G-~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~g~--~vi~GDasd~e~L~~A------gI~ 1072 (1158)
+++++ ++|.|.+ -+|+.+++.|.+.|..|++.|.+++..+.. ++.|. ..+.+|.+|++..+++ ...
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 34554 5555654 599999999999999999999999876543 44454 4567999999887643 123
Q ss_pred ccCEEEE
Q 001096 1073 RACAAAI 1079 (1158)
Q Consensus 1073 ~A~~VIi 1079 (1158)
+.|.+|-
T Consensus 84 ~iDiLVN 90 (254)
T 4fn4_A 84 RIDVLCN 90 (254)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 5677664
No 392
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=78.09 E-value=5.4 Score=45.12 Aligned_cols=95 Identities=19% Similarity=0.205 Sum_probs=65.6
Q ss_pred cccccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHHH----hhhC----CCCEEEccCCCHHHHHhcCccccCEEE
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAI----GRAL----DLPVYFGDAGSREVLHKVGAERACAAA 1078 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~~----l~~~----g~~vi~GDasd~e~L~~AgI~~A~~VI 1078 (1158)
..++.|+|.|.+|..++..|...+. +++++|.++++.+. +.+. ....+.+. .|. + .+++||.||
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~-~d~---~--~~~~aDiVv 92 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS-KDY---S--VTANSKLVI 92 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC-SSG---G--GGTTEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc-CCH---H--HhCCCCEEE
Confidence 4578999999999999999988887 89999999886653 2221 12223221 121 2 378999999
Q ss_pred EecCCc-----------hhhHH----HHHHHHhhCCCceEEEEecC
Q 001096 1079 ITLDTP-----------GANYR----TVWALSKYFPNVKTFVRAHD 1109 (1158)
Q Consensus 1079 i~t~dd-----------~~Nl~----i~l~ar~l~p~~~IIara~d 1109 (1158)
++.+.+ ..|.. ++..+++..|+..+++-.|=
T Consensus 93 i~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 138 (331)
T 4aj2_A 93 ITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP 138 (331)
T ss_dssp ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred EccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence 887543 35543 45577788999877776653
No 393
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=78.05 E-value=2.2 Score=46.74 Aligned_cols=72 Identities=15% Similarity=0.130 Sum_probs=53.7
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hh--CCCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RA--LDLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~--~g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.| .+-+|+.+++.|.+.|.+|++++++++..+.. +. ....++.+|.+|++.++++= ..+.|+
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 114 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVGIIDI 114 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence 4577777 46699999999999999999999998766543 22 24677889999998776541 125788
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 115 lvnnA 119 (291)
T 3cxt_A 115 LVNNA 119 (291)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77654
No 394
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=78.01 E-value=2 Score=46.12 Aligned_cols=73 Identities=8% Similarity=-0.097 Sum_probs=54.4
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcCc------cccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVGA------ERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~AgI------~~A~~VIi 1079 (1158)
+.++|.|. +.+|+.+++.|.++|++|++++++++..+...+ ....++.+|.+|++.++++=- .+.|.+|-
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~ 87 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVN 87 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45777774 669999999999999999999999887654422 136678899999988765411 25777776
Q ss_pred ecC
Q 001096 1080 TLD 1082 (1158)
Q Consensus 1080 ~t~ 1082 (1158)
..+
T Consensus 88 ~Ag 90 (260)
T 1nff_A 88 NAG 90 (260)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 395
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=78.00 E-value=2.7 Score=46.22 Aligned_cols=71 Identities=17% Similarity=0.113 Sum_probs=54.0
Q ss_pred cccccC-CcccHHHHHHHHhhC---C---CCEEEEeCCch-----HHHHhh-hCCCCEEEccCCCHHHHHhcCccccCEE
Q 001096 1011 HIILCG-FGRVGQIIAQLLSER---L---IPFVALDVRSD-----RVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAA 1077 (1158)
Q Consensus 1011 hvVIiG-~G~vG~~Ia~~L~e~---g---~~VvVID~d~~-----~v~~l~-~~g~~vi~GDasd~e~L~~AgI~~A~~V 1077 (1158)
+++|.| .|-+|..+++.|.+. | ++|+++++++. ....+. ..++.++.||.+|++.++++= .+.|+|
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~V 80 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-RGVDAI 80 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-TTCCEE
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh-cCCCEE
Confidence 367887 599999999999986 7 89999997542 222221 236778999999999998763 678998
Q ss_pred EEecC
Q 001096 1078 AITLD 1082 (1158)
Q Consensus 1078 Ii~t~ 1082 (1158)
|-+..
T Consensus 81 ih~A~ 85 (337)
T 1r6d_A 81 VHFAA 85 (337)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 87765
No 396
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=77.98 E-value=3.1 Score=45.07 Aligned_cols=75 Identities=19% Similarity=0.085 Sum_probs=55.2
Q ss_pred ccc-ccccccCC-cc--cHHHHHHHHhhCCCCEEEEeCCc--hHHHHhhhC--CCCEEEccCCCHHHHHhcC------cc
Q 001096 1007 DLQ-DHIILCGF-GR--VGQIIAQLLSERLIPFVALDVRS--DRVAIGRAL--DLPVYFGDAGSREVLHKVG------AE 1072 (1158)
Q Consensus 1007 ~l~-~hvVIiG~-G~--vG~~Ia~~L~e~g~~VvVID~d~--~~v~~l~~~--g~~vi~GDasd~e~L~~Ag------I~ 1072 (1158)
.++ +.++|.|. |. +|..+++.|.++|..|++++.++ +..+.+.+. ...++.+|.+|++.++++- ..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD 102 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence 344 45777774 33 99999999999999999999988 666655332 4778899999998876541 13
Q ss_pred ccCEEEEec
Q 001096 1073 RACAAAITL 1081 (1158)
Q Consensus 1073 ~A~~VIi~t 1081 (1158)
+.|++|-..
T Consensus 103 ~id~li~nA 111 (280)
T 3nrc_A 103 GLDAIVHSI 111 (280)
T ss_dssp SCCEEEECC
T ss_pred CCCEEEECC
Confidence 567877654
No 397
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=77.97 E-value=2.4 Score=45.15 Aligned_cols=72 Identities=11% Similarity=0.040 Sum_probs=52.7
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhCC--CCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RALD--LPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~g--~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++++..+.. +..+ ..++.+|.+|++.++++= ..+.|.
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 94 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDI 94 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45777775 6699999999999999999999998765433 2333 456789999998775541 125777
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 95 lv~~A 99 (260)
T 2zat_A 95 LVSNA 99 (260)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77544
No 398
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=77.94 E-value=1.9 Score=46.66 Aligned_cols=72 Identities=15% Similarity=0.062 Sum_probs=54.4
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcCc------cccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVGA------ERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~AgI------~~A~~VIi 1079 (1158)
+.++|.|. +-+|+.+++.|.++|..|+++|++++..+...+ .+..++.+|.+|++.++++=- .+.|.+|-
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 91 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDN 91 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35677775 669999999999999999999999887654432 357788999999988765411 25677765
Q ss_pred ec
Q 001096 1080 TL 1081 (1158)
Q Consensus 1080 ~t 1081 (1158)
..
T Consensus 92 nA 93 (271)
T 3tzq_B 92 NA 93 (271)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 399
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=77.93 E-value=3 Score=44.47 Aligned_cols=73 Identities=11% Similarity=0.071 Sum_probs=53.7
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-------CCCCEEEccC--CCHHHHHhcC------ccc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-------LDLPVYFGDA--GSREVLHKVG------AER 1073 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-------~g~~vi~GDa--sd~e~L~~Ag------I~~ 1073 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+...+ ....++..|. +|++.++++- ..+
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~ 92 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPR 92 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCC
Confidence 45677775 569999999999999999999999887654422 2577889999 8887665431 125
Q ss_pred cCEEEEecC
Q 001096 1074 ACAAAITLD 1082 (1158)
Q Consensus 1074 A~~VIi~t~ 1082 (1158)
.|++|-..+
T Consensus 93 id~lv~nAg 101 (252)
T 3f1l_A 93 LDGVLHNAG 101 (252)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 777775543
No 400
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=77.90 E-value=8.8 Score=39.34 Aligned_cols=58 Identities=12% Similarity=0.098 Sum_probs=41.1
Q ss_pred ccCEEEEecCCchhh-HHHHHHHHhh----CCCceEEEEecCh---hhHHHHHHCCCCeeecCCcH
Q 001096 1073 RACAAAITLDTPGAN-YRTVWALSKY----FPNVKTFVRAHDI---DHGLNLEKAGATAVVPETLE 1130 (1158)
Q Consensus 1073 ~A~~VIi~t~dd~~N-l~i~l~ar~l----~p~~~IIara~d~---e~~~~L~~aGAd~VI~p~~~ 1130 (1158)
..|+|++-..-+..| +.++..+|+. +|+++||+.+.+. +......++|++.++.....
T Consensus 119 ~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~KP~~ 184 (206)
T 3mm4_A 119 PFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDKSLN 184 (206)
T ss_dssp SCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEETTCT
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcCcHH
Confidence 578888776655433 5677777775 6888888887654 56677788999977765443
No 401
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=77.89 E-value=4.2 Score=45.82 Aligned_cols=124 Identities=12% Similarity=-0.000 Sum_probs=77.9
Q ss_pred ccccccCCcccHH-HHHHHHhhC-CCCEE-EEeCCchHHHHhh-hCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch
Q 001096 1010 DHIILCGFGRVGQ-IIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~-~Ia~~L~e~-g~~Vv-VID~d~~~v~~l~-~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
-++.|+|.|.+|+ ..++.|.+. +.+++ +.|.|+++.+... +.|.+.+ .|.+.+.+ -.+.|+|+++++++.
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~----~~~~~ll~--~~~~D~V~i~tp~~~ 101 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV----EGYPALLE--RDDVDAVYVPLPAVL 101 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE----ESHHHHHT--CTTCSEEEECCCGGG
T ss_pred eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc----CCHHHHhc--CCCCCEEEECCCcHH
Confidence 4789999999998 688888776 66766 6799998887664 4477765 34444432 246899999999884
Q ss_pred hhHHHHHHHHhhCCCceEEEE---ecChhhHHHH----HHCCCCeeecC--CcHHHHHHHHHHHHh
Q 001096 1086 ANYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVPE--TLEPSLQLAAAVLAQ 1142 (1158)
Q Consensus 1086 ~Nl~i~l~ar~l~p~~~IIar---a~d~e~~~~L----~~aGAd~VI~p--~~~a~~~LA~~vl~~ 1142 (1158)
. ...+..+-+.+ ..|++. +.+.+..+.+ ++.|....+.. ...+...-++.++..
T Consensus 102 h-~~~~~~al~aG--k~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~ 164 (350)
T 3rc1_A 102 H-AEWIDRALRAG--KHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDE 164 (350)
T ss_dssp H-HHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHT
T ss_pred H-HHHHHHHHHCC--CcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhc
Confidence 4 34444444444 456663 4455554444 55676554433 234455555555543
No 402
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=77.83 E-value=2 Score=45.96 Aligned_cols=72 Identities=18% Similarity=0.150 Sum_probs=52.7
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhCC--CCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RALD--LPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~g--~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +.+|+.+++.|.++|.+|++++++++..+.. +..| ..++.+|.+|++.++++= ..+.|.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 87 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF 87 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45777764 6799999999999999999999998766543 2223 566789999998765431 125777
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 88 lv~nA 92 (262)
T 1zem_A 88 LFNNA 92 (262)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77644
No 403
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=77.79 E-value=2.8 Score=47.21 Aligned_cols=72 Identities=17% Similarity=0.192 Sum_probs=53.8
Q ss_pred cccccC-CcccHHHHHHHHh-hCCCCEEEEeCCchH---------HHHhh-----------hCC---CCEEEccCCCHHH
Q 001096 1011 HIILCG-FGRVGQIIAQLLS-ERLIPFVALDVRSDR---------VAIGR-----------ALD---LPVYFGDAGSREV 1065 (1158)
Q Consensus 1011 hvVIiG-~G~vG~~Ia~~L~-e~g~~VvVID~d~~~---------v~~l~-----------~~g---~~vi~GDasd~e~ 1065 (1158)
.++|.| .|-+|..+++.|. +.|++|++++++... .+.+. ..+ +.++.||.+|++.
T Consensus 4 ~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 83 (397)
T 1gy8_A 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF 83 (397)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHH
Confidence 478887 4899999999999 999999999986543 22221 124 7889999999998
Q ss_pred HHhcCc--cccCEEEEecC
Q 001096 1066 LHKVGA--ERACAAAITLD 1082 (1158)
Q Consensus 1066 L~~AgI--~~A~~VIi~t~ 1082 (1158)
+.++=- ...|+||-+..
T Consensus 84 ~~~~~~~~~~~d~vih~A~ 102 (397)
T 1gy8_A 84 LNGVFTRHGPIDAVVHMCA 102 (397)
T ss_dssp HHHHHHHSCCCCEEEECCC
T ss_pred HHHHHHhcCCCCEEEECCC
Confidence 876521 23888887764
No 404
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=77.79 E-value=2 Score=49.83 Aligned_cols=86 Identities=13% Similarity=0.064 Sum_probs=57.3
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh--h
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA--N 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~--N 1087 (1158)
..+.|+|+|++|+.+++.|...|.+|++.|.++...+.....|.... .+.+.+ +.++|.|++.++.... +
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~----~~l~el----l~~aDvV~l~~Plt~~t~~ 263 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH----ATREDM----YPVCDVVTLNCPLHPETEH 263 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC----SSHHHH----GGGCSEEEECSCCCTTTTT
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceec----CCHHHH----HhcCCEEEEecCCchHHHH
Confidence 35889999999999999999999999999998765554555554321 233332 3479999999885432 2
Q ss_pred HHHHHHHHhhCCCceE
Q 001096 1088 YRTVWALSKYFPNVKT 1103 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~I 1103 (1158)
+.-...+....|...+
T Consensus 264 li~~~~l~~mk~gail 279 (393)
T 2nac_A 264 MINDETLKLFKRGAYI 279 (393)
T ss_dssp CBSHHHHTTSCTTEEE
T ss_pred HhhHHHHhhCCCCCEE
Confidence 2212334445555333
No 405
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=77.74 E-value=2.4 Score=47.68 Aligned_cols=119 Identities=13% Similarity=0.085 Sum_probs=73.1
Q ss_pred ccccccCC-cccHHHHHHHHhhCCC-------CEEEEeCC----chHHH----HhhhCCCCEEEccCCCHHHHHhcCccc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLI-------PFVALDVR----SDRVA----IGRALDLPVYFGDAGSREVLHKVGAER 1073 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~-------~VvVID~d----~~~v~----~l~~~g~~vi~GDasd~e~L~~AgI~~ 1073 (1158)
.+++|+|. |.+|..++..|...+. +++++|.+ +++.+ .+.+...++ .+|......+.++ +++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~a-l~~ 83 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTA-FKD 83 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHH-TTT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHH-hCC
Confidence 36899997 9999999999988875 79999998 54443 233322232 2444332233332 568
Q ss_pred cCEEEEecCCc-----------hhhHH----HHHHHHhhC-CCceEEEEecChh-hHHHHHHC--C--CCeeecCCcH
Q 001096 1074 ACAAAITLDTP-----------GANYR----TVWALSKYF-PNVKTFVRAHDID-HGLNLEKA--G--ATAVVPETLE 1130 (1158)
Q Consensus 1074 A~~VIi~t~dd-----------~~Nl~----i~l~ar~l~-p~~~IIara~d~e-~~~~L~~a--G--Ad~VI~p~~~ 1130 (1158)
||+||.+.+.+ ..|.. ++..+++.. |+.+++...+=.+ ....+.+. | ...|+-....
T Consensus 84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~L 161 (329)
T 1b8p_A 84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRL 161 (329)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHH
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCCCCHHHEEEeecH
Confidence 99998887643 24543 455778885 8877777664222 33444443 2 4456666544
No 406
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=77.70 E-value=2.4 Score=45.74 Aligned_cols=73 Identities=14% Similarity=0.109 Sum_probs=54.0
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhCC----CCEEEccCCCHHHHHhcC------cccc
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RALD----LPVYFGDAGSREVLHKVG------AERA 1074 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~g----~~vi~GDasd~e~L~~Ag------I~~A 1074 (1158)
+.++|.| .|.+|+.+++.|.+.|+.|++++++++..+.+ +..+ +.++.+|.+|++.++++= ....
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 112 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV 112 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence 3566776 56799999999999999999999998776543 2333 456789999998876541 1257
Q ss_pred CEEEEecC
Q 001096 1075 CAAAITLD 1082 (1158)
Q Consensus 1075 ~~VIi~t~ 1082 (1158)
|+||-..+
T Consensus 113 D~vi~~Ag 120 (279)
T 1xg5_A 113 DICINNAG 120 (279)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 88776554
No 407
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=77.67 E-value=9.7 Score=36.32 Aligned_cols=101 Identities=12% Similarity=0.093 Sum_probs=62.3
Q ss_pred CCCEEEEeCCchHHHHh---hhCCCCEEEccCCCHHHHHhcCccc-cCEEEEecCCch-hhHHHHHHHHhhCCCceEEEE
Q 001096 1032 LIPFVALDVRSDRVAIG---RALDLPVYFGDAGSREVLHKVGAER-ACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l---~~~g~~vi~GDasd~e~L~~AgI~~-A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIar 1106 (1158)
...|.++|.|+...+.+ -+.|+.+...+ +..+.++.+.-.+ .+.|++-..-+. .-+.++..+|+.+|+++||+.
T Consensus 4 ~~~ILivdd~~~~~~~l~~~L~~~~~v~~~~-~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~ 82 (151)
T 3kcn_A 4 NERILLVDDDYSLLNTLKRNLSFDFEVTTCE-SGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLML 82 (151)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTTSEEEEES-SHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEE
T ss_pred CCeEEEEeCCHHHHHHHHHHhccCceEEEeC-CHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEE
Confidence 45677787777655433 22366655322 2234444443334 488887766543 346678889999999999888
Q ss_pred ecChh--hHHHHHHCC-CCeeecCCcHHHH
Q 001096 1107 AHDID--HGLNLEKAG-ATAVVPETLEPSL 1133 (1158)
Q Consensus 1107 a~d~e--~~~~L~~aG-Ad~VI~p~~~a~~ 1133 (1158)
+...+ ......+.| ++.++........
T Consensus 83 s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~ 112 (151)
T 3kcn_A 83 TGNQDLTTAMEAVNEGQVFRFLNKPCQMSD 112 (151)
T ss_dssp ECGGGHHHHHHHHHHTCCSEEEESSCCHHH
T ss_pred ECCCCHHHHHHHHHcCCeeEEEcCCCCHHH
Confidence 77654 455566778 8777765554443
No 408
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=77.65 E-value=2.1 Score=47.06 Aligned_cols=66 Identities=11% Similarity=0.067 Sum_probs=51.8
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
.++++|+|.|..|+.++..|.+.|.+++++++++++.+.+.+.|..+. +..+ +.++|.||-+|+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~--~~~~--------l~~~DiVInaTp~G 183 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF--MEPP--------KSAFDLIINATSAS 183 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE--SSCC--------SSCCSEEEECCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe--cHHH--------hccCCEEEEcccCC
Confidence 567999999999999999999999999999999999877765454433 2211 22799999888653
No 409
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=77.59 E-value=1.9 Score=46.10 Aligned_cols=72 Identities=11% Similarity=0.007 Sum_probs=53.2
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----h--CCCCEEEccCCCHHHHHhcC-------ccccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----A--LDLPVYFGDAGSREVLHKVG-------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~--~g~~vi~GDasd~e~L~~Ag-------I~~A~ 1075 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+... . ....++.+|.+|++.++++= ..+.|
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id 85 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLD 85 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCce
Confidence 35677764 56999999999999999999999987765432 1 13567889999998765431 23568
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
++|-..
T Consensus 86 ~lvnnA 91 (260)
T 2qq5_A 86 VLVNNA 91 (260)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 877655
No 410
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=77.50 E-value=5.7 Score=36.51 Aligned_cols=99 Identities=10% Similarity=-0.000 Sum_probs=60.0
Q ss_pred CEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhh--CCCceEEEE
Q 001096 1034 PFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKY--FPNVKTFVR 1106 (1158)
Q Consensus 1034 ~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l--~p~~~IIar 1106 (1158)
.|.++|.|+...+. +.+.|+.+...+ +-.+.++.+.-...+.+++-..-+. .-+.++..+|+. +|+++||+.
T Consensus 5 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~ 83 (127)
T 3i42_A 5 QALIVEDYQAAAETFKELLEMLGFQADYVM-SGTDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAV 83 (127)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTEEEEEES-SHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEE
T ss_pred eEEEEcCCHHHHHHHHHHHHHcCCCEEEEC-CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEE
Confidence 46666666654432 234465544322 2234444444456788887766543 346678888888 788888887
Q ss_pred ecChhhH-HHHHHCCCCeeecCCcHHHH
Q 001096 1107 AHDIDHG-LNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1107 a~d~e~~-~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+...+.. ......|++.++........
T Consensus 84 s~~~~~~~~~~~~~g~~~~l~KP~~~~~ 111 (127)
T 3i42_A 84 SGFAKNDLGKEACELFDFYLEKPIDIAS 111 (127)
T ss_dssp ECC-CTTCCHHHHHHCSEEEESSCCHHH
T ss_pred ECCcchhHHHHHHHhhHHheeCCCCHHH
Confidence 7654332 55667788887766555554
No 411
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=77.40 E-value=2.7 Score=45.31 Aligned_cols=72 Identities=15% Similarity=0.069 Sum_probs=52.4
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhh-----h--CCCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-----A--LDLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~-----~--~g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.| .+.+|+.+++.|.++|++|++++++++..+... . ....++.+|.+|++.++++= ..+.|
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 101 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD 101 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4567776 467999999999999999999999987664331 1 23456789999998776541 12577
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
++|-..
T Consensus 102 ~lvnnA 107 (267)
T 1vl8_A 102 TVVNAA 107 (267)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 777554
No 412
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=77.40 E-value=2.6 Score=31.51 Aligned_cols=27 Identities=19% Similarity=0.281 Sum_probs=23.5
Q ss_pred hhHHHHHHHhhhHHHHHHHHHHHHHHH
Q 001096 286 NCETELRRLQSKKEELQKEVDRLNEVA 312 (1158)
Q Consensus 286 ~~~~~l~~~~~~~~~~q~~~~~~~~~~ 312 (1158)
..|+..+.|-.+|.+|+.||.||.++.
T Consensus 4 QLEdKvEeLl~~~~~Le~EV~RLk~lL 30 (33)
T 3c3g_A 4 XIEXKLXEIXSKXYHXENXLARIKXLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 457788899999999999999999864
No 413
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=77.38 E-value=1.7 Score=48.37 Aligned_cols=71 Identities=11% Similarity=0.086 Sum_probs=52.2
Q ss_pred ccccCC-cccHHHHHHHHhhC-CCCEEEEeCCc--hHHHHhh----hCCCCEEEccCCCHHHHHhcCc-cccCEEEEecC
Q 001096 1012 IILCGF-GRVGQIIAQLLSER-LIPFVALDVRS--DRVAIGR----ALDLPVYFGDAGSREVLHKVGA-ERACAAAITLD 1082 (1158)
Q Consensus 1012 vVIiG~-G~vG~~Ia~~L~e~-g~~VvVID~d~--~~v~~l~----~~g~~vi~GDasd~e~L~~AgI-~~A~~VIi~t~ 1082 (1158)
++|.|. |-+|..+++.|.+. |++|+++++++ ...+.+. ..++.++.||.+|++.++++=- .+.|+||-+..
T Consensus 3 vlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 82 (361)
T 1kew_A 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAA 82 (361)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred EEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEECCC
Confidence 678875 89999999999987 79999999764 2222222 2356788999999998876521 16788887654
No 414
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.38 E-value=12 Score=35.15 Aligned_cols=99 Identities=8% Similarity=0.118 Sum_probs=61.1
Q ss_pred CEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEEec
Q 001096 1034 PFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRAH 1108 (1158)
Q Consensus 1034 ~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIara~ 1108 (1158)
.+.++|.|+...+.+ ...|+.+... .+-.+.++.+.-...+.+++-..-+. .-+.++..+|+..|.++||+.+.
T Consensus 6 ~ILivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~ 84 (137)
T 3cfy_A 6 RVLLVEDSTSLAILYKQYVKDEPYDIFHV-ETGRDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATA 84 (137)
T ss_dssp EEEEECSCTTHHHHHHHHTTTSSSEEEEE-SSHHHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEES
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCceEEEe-CCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEe
Confidence 466777766554332 3345654432 12244454444446788777665443 34567888888888888888776
Q ss_pred Ch--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1109 DI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1109 d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.. +......++|++..+........
T Consensus 85 ~~~~~~~~~~~~~ga~~~l~KP~~~~~ 111 (137)
T 3cfy_A 85 HGSVDLAVNLIQKGAEDFLEKPINADR 111 (137)
T ss_dssp SCCHHHHHHHHHTTCSEEEESSCCHHH
T ss_pred cCcHHHHHHHHHCCccEEEeCCCCHHH
Confidence 44 56667788999987766555444
No 415
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=77.34 E-value=1.4 Score=47.79 Aligned_cols=73 Identities=19% Similarity=0.090 Sum_probs=53.4
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----hC-CCCEEEccCCCHHHHHhcC------ccccCEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL-DLPVYFGDAGSREVLHKVG------AERACAA 1077 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~~-g~~vi~GDasd~e~L~~Ag------I~~A~~V 1077 (1158)
+.++|.|. +.+|+.+++.|.++|.+|++++++++..+... .. ...++.+|.+|++.++++= ..+.|++
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 109 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDIL 109 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 45777775 67999999999999999999999987665432 22 3556679999998775431 1257887
Q ss_pred EEecC
Q 001096 1078 AITLD 1082 (1158)
Q Consensus 1078 Ii~t~ 1082 (1158)
|-..+
T Consensus 110 vnnAg 114 (276)
T 2b4q_A 110 VNNAG 114 (276)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 76543
No 416
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=77.33 E-value=11 Score=34.65 Aligned_cols=101 Identities=12% Similarity=0.071 Sum_probs=59.8
Q ss_pred CCCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhC--CCceEE
Q 001096 1032 LIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYF--PNVKTF 1104 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~--p~~~II 1104 (1158)
...|.++|.|+.....+ .+.|+.+.... +..+.++.+.-...+.+++-..-+. .-+.++..+|+.. +...|+
T Consensus 6 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii 84 (132)
T 3lte_A 6 SKRILVVDDDQAMAAAIERVLKRDHWQVEIAH-NGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKIL 84 (132)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEE
T ss_pred CccEEEEECCHHHHHHHHHHHHHCCcEEEEeC-CHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEE
Confidence 34667777766644322 34566554322 2234444444456788877765443 3456777888776 455666
Q ss_pred EEec-ChhhHHHHHHCCCCeeecCCcHHHH
Q 001096 1105 VRAH-DIDHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1105 ara~-d~e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+... +.+......++|++.++........
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~l~kP~~~~~ 114 (132)
T 3lte_A 85 VVSGLDKAKLQQAVTEGADDYLEKPFDNDA 114 (132)
T ss_dssp EECCSCSHHHHHHHHHTCCEEECSSCCHHH
T ss_pred EEeCCChHHHHHHHHhChHHHhhCCCCHHH
Confidence 5554 3445667788999988876665554
No 417
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=77.32 E-value=2.1 Score=45.62 Aligned_cols=73 Identities=11% Similarity=0.083 Sum_probs=54.5
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+...+ ....++.+|.+|++.++++= ..+.|.+|-
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 86 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVN 86 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 35677775 569999999999999999999999987765532 24566789999998876541 125777775
Q ss_pred ecC
Q 001096 1080 TLD 1082 (1158)
Q Consensus 1080 ~t~ 1082 (1158)
..+
T Consensus 87 nAg 89 (247)
T 3rwb_A 87 NAS 89 (247)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 418
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=77.25 E-value=0.9 Score=52.31 Aligned_cols=71 Identities=13% Similarity=0.034 Sum_probs=54.1
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHH---HHh---------------hhCCCCEEEccCCCHHHHHhcC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRV---AIG---------------RALDLPVYFGDAGSREVLHKVG 1070 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v---~~l---------------~~~g~~vi~GDasd~e~L~~Ag 1070 (1158)
..++|.|. |-+|..+++.|.+.|.+|++++++++.. +++ ...++.++.||.+|++.+. .
T Consensus 70 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--~ 147 (427)
T 4f6c_A 70 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--L 147 (427)
T ss_dssp EEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC--C
T ss_pred CEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC--C
Confidence 46888885 8999999999999999999999988722 211 2357889999999988888 5
Q ss_pred ccccCEEEEecC
Q 001096 1071 AERACAAAITLD 1082 (1158)
Q Consensus 1071 I~~A~~VIi~t~ 1082 (1158)
..+.|+||-+..
T Consensus 148 ~~~~d~Vih~A~ 159 (427)
T 4f6c_A 148 PENMDTIIHAGA 159 (427)
T ss_dssp SSCCSEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 678999886654
No 419
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=77.18 E-value=1 Score=49.09 Aligned_cols=70 Identities=17% Similarity=0.146 Sum_probs=49.9
Q ss_pred cccccC-CcccHHHHHHHHhhCCCCEEEEeC-CchH---HHHhhh-----CCCCEEEccCCCHHHHHhcCccccCEEEEe
Q 001096 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDV-RSDR---VAIGRA-----LDLPVYFGDAGSREVLHKVGAERACAAAIT 1080 (1158)
Q Consensus 1011 hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~-d~~~---v~~l~~-----~g~~vi~GDasd~e~L~~AgI~~A~~VIi~ 1080 (1158)
.++|.| .|-+|..+++.|.+.|++|+++++ +++. ...+.+ .++.++.||.+|++.++++ ++++|+||-+
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vih~ 81 (322)
T 2p4h_X 3 RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAA-IEGCVGIFHT 81 (322)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHH-HTTCSEEEEC
T ss_pred EEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHH-HcCCCEEEEc
Confidence 577888 588999999999999999999887 6532 111111 1356778999999888765 3467888765
Q ss_pred c
Q 001096 1081 L 1081 (1158)
Q Consensus 1081 t 1081 (1158)
.
T Consensus 82 A 82 (322)
T 2p4h_X 82 A 82 (322)
T ss_dssp C
T ss_pred C
Confidence 4
No 420
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=77.18 E-value=15 Score=33.32 Aligned_cols=98 Identities=13% Similarity=0.045 Sum_probs=59.8
Q ss_pred CEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh-hHHHHHHHHhhCCCceEEEEec
Q 001096 1034 PFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-NYRTVWALSKYFPNVKTFVRAH 1108 (1158)
Q Consensus 1034 ~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~-Nl~i~l~ar~l~p~~~IIara~ 1108 (1158)
.+.++|.|+...+. +...|+.+.... +..+.+..+.-...+.+++-..-+.. -+.++..+|+ .|..++++.+.
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~~~~v~~~~-~~~~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~-~~~~~ii~~s~ 81 (122)
T 1zgz_A 4 HIVIVEDEPVTQARLQSYFTQEGYTVSVTA-SGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRE-RSTVGIILVTG 81 (122)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCEEEEES-SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHT-TCCCEEEEEES
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCeEEEec-CHHHHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHh-cCCCCEEEEEC
Confidence 56777777654432 234566655432 22344444433457888777655433 3567777887 67788887766
Q ss_pred Chh--hHHHHHHCCCCeeecCCcHHHH
Q 001096 1109 DID--HGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1109 d~e--~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
..+ ......++|++..+........
T Consensus 82 ~~~~~~~~~~~~~ga~~~l~Kp~~~~~ 108 (122)
T 1zgz_A 82 RSDRIDRIVGLEMGADDYVTKPLELRE 108 (122)
T ss_dssp SCCHHHHHHHHHHTCSEEEESSCCHHH
T ss_pred CCChhhHHHHHHhCHHHHccCCCCHHH
Confidence 543 4556677899988877665544
No 421
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=77.12 E-value=2.7 Score=45.51 Aligned_cols=72 Identities=11% Similarity=-0.022 Sum_probs=53.6
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----h--CCCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----A--LDLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~--~g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+... + .....+.+|.+|++.++++= ..+.|+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNV 108 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35677775 56999999999999999999999988765432 2 24677889999998776541 125677
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 109 lvnnA 113 (270)
T 3ftp_A 109 LVNNA 113 (270)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77654
No 422
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=77.11 E-value=2.2 Score=46.04 Aligned_cols=73 Identities=16% Similarity=0.195 Sum_probs=54.9
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcCc------cccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVGA------ERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~AgI------~~A~~VIi 1079 (1158)
+.++|.|. +-+|+.+++.|.+.|..|++++++++..+...+ ....++.+|.+|++.++++-- .+.|++|-
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 107 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVN 107 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45677775 569999999999999999999999988765532 246677899999988765411 25777776
Q ss_pred ecC
Q 001096 1080 TLD 1082 (1158)
Q Consensus 1080 ~t~ 1082 (1158)
..+
T Consensus 108 nAg 110 (266)
T 3grp_A 108 NAG 110 (266)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 423
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=77.01 E-value=2.2 Score=46.49 Aligned_cols=72 Identities=11% Similarity=0.026 Sum_probs=53.1
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----hC--CCCEEEccCCCHHHHHhcCc------cccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVGA------ERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~~--g~~vi~GDasd~e~L~~AgI------~~A~~ 1076 (1158)
+.++|.|. +.+|+.+++.|.+.|..|++++++++..+... .. ...++.+|.+|++.++++=- .+.|+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDI 108 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45677775 56999999999999999999999988765442 22 35577899999987654311 25777
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 109 lVnnA 113 (283)
T 3v8b_A 109 VVANA 113 (283)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77544
No 424
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=77.01 E-value=4.6 Score=44.83 Aligned_cols=91 Identities=16% Similarity=0.076 Sum_probs=63.3
Q ss_pred cccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHHH----hhh----C--CCCEEEccCCCHHHHHhcCccccCEEE
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAI----GRA----L--DLPVYFGDAGSREVLHKVGAERACAAA 1078 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~~----l~~----~--g~~vi~GDasd~e~L~~AgI~~A~~VI 1078 (1158)
++.|+|.|.+|..++..|...+. +++++|.++++++. +.+ . ...+... +| ...+++||.||
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d-----~~a~~~aDiVV 74 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD-----YSLLKGSEIIV 74 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC-----GGGGTTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC-----HHHhCCCCEEE
Confidence 36789999999999999998888 89999999988641 111 1 1223222 12 23467899999
Q ss_pred EecCCc-----------hhhHH----HHHHHHhhCCCceEEEEec
Q 001096 1079 ITLDTP-----------GANYR----TVWALSKYFPNVKTFVRAH 1108 (1158)
Q Consensus 1079 i~t~dd-----------~~Nl~----i~l~ar~l~p~~~IIara~ 1108 (1158)
++.+.+ ..|.. ++..+.+.+|+..+++..|
T Consensus 75 iaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 75 VTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred ECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 988654 23543 3456777899988777774
No 425
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=77.00 E-value=2.2 Score=45.99 Aligned_cols=72 Identities=13% Similarity=-0.010 Sum_probs=53.4
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC--CCCEEEccCCCHHHHHhcC------c-cccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------A-ERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~--g~~vi~GDasd~e~L~~Ag------I-~~A~ 1075 (1158)
+.++|.|. +.+|+.+++.|.++|.+|++++++++..+.. +.. ...++.+|.+|++.++++= . .+.|
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id 101 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN 101 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 45777775 6799999999999999999999998766443 222 3566789999998876531 1 3577
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
++|-..
T Consensus 102 ~lv~nA 107 (273)
T 1ae1_A 102 ILVNNA 107 (273)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 776654
No 426
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=76.92 E-value=20 Score=32.62 Aligned_cols=99 Identities=11% Similarity=0.070 Sum_probs=62.6
Q ss_pred CCEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh-HHHHHHHHhhCCCceEEEEe
Q 001096 1033 IPFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-YRTVWALSKYFPNVKTFVRA 1107 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N-l~i~l~ar~l~p~~~IIara 1107 (1158)
..+.++|.|+...+. +...|+.+...+ +-.+.++.+.-.+.+.+++-..-+..| +.++..+|+.. +.+||+.+
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~-~~~ii~~t 80 (120)
T 3f6p_A 3 KKILVVDDEKPIADILEFNLRKEGYEVHCAH-DGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKY-DMPIIMLT 80 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHHHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTC-CSCEEEEE
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCEEEEEeC-CHHHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcC-CCCEEEEE
Confidence 357778877765443 345577665432 234555555556788888877665544 45677777754 56776666
Q ss_pred cC--hhhHHHHHHCCCCeeecCCcHHHH
Q 001096 1108 HD--IDHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1108 ~d--~e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.. ........++|++..+........
T Consensus 81 ~~~~~~~~~~~~~~ga~~~l~KP~~~~~ 108 (120)
T 3f6p_A 81 AKDSEIDKVIGLEIGADDYVTKPFSTRE 108 (120)
T ss_dssp ESSCHHHHHHHHHTTCCEEEEESCCHHH
T ss_pred CCCChHHHHHHHhCCcceeEcCCCCHHH
Confidence 54 345566788999988776665544
No 427
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=76.92 E-value=6.5 Score=44.07 Aligned_cols=109 Identities=22% Similarity=0.206 Sum_probs=70.6
Q ss_pred ccccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHHH-h---hhC-----CCCEEEccCCCHHHHHhcCccccCEEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAI-G---RAL-----DLPVYFGDAGSREVLHKVGAERACAAA 1078 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~~-l---~~~-----g~~vi~GDasd~e~L~~AgI~~A~~VI 1078 (1158)
.++.|+|.|.+|..++-.|...+. +++++|.|+++.+. . .+. ...+. +| + ...+++||.||
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~-----~~a~~~aDvVi 77 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--E-----YSDCKDADLVV 77 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--C-----GGGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--C-----HHHhCCCCEEE
Confidence 569999999999999999987775 89999999887753 1 111 22233 32 1 22378999999
Q ss_pred EecCCch-----------hhHH----HHHHHHhhCCCceEEEEecChhh--HHHHHH-CCCC--eeecC
Q 001096 1079 ITLDTPG-----------ANYR----TVWALSKYFPNVKTFVRAHDIDH--GLNLEK-AGAT--AVVPE 1127 (1158)
Q Consensus 1079 i~t~dd~-----------~Nl~----i~l~ar~l~p~~~IIara~d~e~--~~~L~~-aGAd--~VI~p 1127 (1158)
++.+-+. .|.. ++..+++.+|+..+++. .|+-+ ...+.+ .|.+ +||--
T Consensus 78 i~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~-tNPv~~~t~~~~k~s~~p~~rviG~ 145 (318)
T 1ez4_A 78 ITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA-ANPVDILTYATWKFSGFPKERVIGS 145 (318)
T ss_dssp ECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEEC-SSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe-CCcHHHHHHHHHHHcCCCHHHEEec
Confidence 9886542 3433 44566777999888885 55532 333333 3443 55543
No 428
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=76.86 E-value=2.2 Score=45.71 Aligned_cols=73 Identities=11% Similarity=0.005 Sum_probs=53.5
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hh----CCCCEEEccCCCHHHHHhcC------cccc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RA----LDLPVYFGDAGSREVLHKVG------AERA 1074 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~----~g~~vi~GDasd~e~L~~Ag------I~~A 1074 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++++..+.. .+ .+..++.+|.+|++.++++= ..+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL 87 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence 35777775 6799999999999999999999998765432 21 13567889999998876541 1246
Q ss_pred CEEEEecC
Q 001096 1075 CAAAITLD 1082 (1158)
Q Consensus 1075 ~~VIi~t~ 1082 (1158)
|++|-..+
T Consensus 88 d~lv~~Ag 95 (267)
T 2gdz_A 88 DILVNNAG 95 (267)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 88776653
No 429
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=76.84 E-value=1.8 Score=46.66 Aligned_cols=72 Identities=11% Similarity=0.100 Sum_probs=52.9
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---------CCCCEEEccCCCHHHHHhcCc------cc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---------LDLPVYFGDAGSREVLHKVGA------ER 1073 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---------~g~~vi~GDasd~e~L~~AgI------~~ 1073 (1158)
+.++|.|. |.+|+.+++.|.++|++|+++++++++.+...+ ..+.++.+|.+|++.++++=- .+
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK 86 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence 45777775 679999999999999999999999887654321 135678899999987765411 25
Q ss_pred cCEEEEec
Q 001096 1074 ACAAAITL 1081 (1158)
Q Consensus 1074 A~~VIi~t 1081 (1158)
.|++|-..
T Consensus 87 id~lv~~A 94 (278)
T 1spx_A 87 LDILVNNA 94 (278)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 67776543
No 430
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=76.84 E-value=6.3 Score=43.73 Aligned_cols=123 Identities=15% Similarity=0.110 Sum_probs=77.7
Q ss_pred ccccccCCcccHHHHHHHHhhC-CCCEE-EEeCCchHHHHhh-hCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~-g~~Vv-VID~d~~~v~~l~-~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
-++.|+|.|.+|+..++.|.+. +.+++ +.|.++++.+.+. ..|.+ .+|.+.+-+. .+.|+|++++++...
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-----~~~~~~~l~~--~~~D~V~i~tp~~~h 76 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-----VRTIDAIEAA--ADIDAVVICTPTDTH 76 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-----ECCHHHHHHC--TTCCEEEECSCGGGH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-----cCCHHHHhcC--CCCCEEEEeCCchhH
Confidence 4688999999999999999875 67766 7899999887654 44665 2454444432 368999999988744
Q ss_pred hHHHHHHHHhhCCCceEEEE---ecChhhHHHH----HHCCCCeeecCC--cHHHHHHHHHHHHh
Q 001096 1087 NYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVPET--LEPSLQLAAAVLAQ 1142 (1158)
Q Consensus 1087 Nl~i~l~ar~l~p~~~IIar---a~d~e~~~~L----~~aGAd~VI~p~--~~a~~~LA~~vl~~ 1142 (1158)
...+..+-+.+ ..|++. +.+.+..+.+ ++.|....+... ..+...-++.++..
T Consensus 77 -~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~ 138 (331)
T 4hkt_A 77 -ADLIERFARAG--KAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDD 138 (331)
T ss_dssp -HHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHT
T ss_pred -HHHHHHHHHcC--CcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHc
Confidence 33444444443 356653 4455544444 556765554332 34555555555554
No 431
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=76.82 E-value=4.2 Score=45.47 Aligned_cols=114 Identities=15% Similarity=0.145 Sum_probs=71.6
Q ss_pred cccccCC-cccHHHHHHHHhhCC--CCEEEEeCCchHHH--HhhhCCCCE-EEcc-C-CCHHHHHhcCccccCEEEEecC
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERL--IPFVALDVRSDRVA--IGRALDLPV-YFGD-A-GSREVLHKVGAERACAAAITLD 1082 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g--~~VvVID~d~~~v~--~l~~~g~~v-i~GD-a-sd~e~L~~AgI~~A~~VIi~t~ 1082 (1158)
++.|+|. |.+|..++..|...+ .+++++|.++.... .+.+...+. +.+- . +| +++ .+++||.||++.+
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d---~~~-a~~~aDvVvi~ag 77 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ---LPD-CLKGCDVVVIPAG 77 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGG---HHH-HHTTCSEEEECCS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCC---HHH-HhCCCCEEEECCC
Confidence 4789998 999999999999888 68999999983222 222222221 2210 0 12 221 1458999999875
Q ss_pred Cc-----------hhhHH----HHHHHHhhCCCceEEEEecChhhH------HHHHHCC---CCeeecCCc
Q 001096 1083 TP-----------GANYR----TVWALSKYFPNVKTFVRAHDIDHG------LNLEKAG---ATAVVPETL 1129 (1158)
Q Consensus 1083 dd-----------~~Nl~----i~l~ar~l~p~~~IIara~d~e~~------~~L~~aG---Ad~VI~p~~ 1129 (1158)
.+ ..|.. ++..+++..|+.+++. +.|+-+. ..+++.+ ..+|+--+.
T Consensus 78 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~sNPv~~~~~i~~~~~~~~~~~p~~rvig~t~ 147 (314)
T 1mld_A 78 VPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICI-ISNPVNSTIPITAEVFKKHGVYNPNKIFGVTT 147 (314)
T ss_dssp CCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE-CSSCHHHHHHHHHHHHHHTTCCCTTSEEECCH
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-ECCCcchhHHHHHHHHHHcCCCCcceEEEeec
Confidence 44 23433 4456677889988777 4666554 3466665 667776644
No 432
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=76.80 E-value=2.6 Score=44.98 Aligned_cols=72 Identities=14% Similarity=0.050 Sum_probs=52.7
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchH-HHHhh-------hCCCCEEEccCCCHHHHHhcC------cccc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDR-VAIGR-------ALDLPVYFGDAGSREVLHKVG------AERA 1074 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~-v~~l~-------~~g~~vi~GDasd~e~L~~Ag------I~~A 1074 (1158)
+.++|.|. +-+|+.+++.|.++|.+|++++++++. .+... .....++.+|.+|++.++++= ..+.
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 84 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI 84 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 35777775 579999999999999999999999876 54332 123566789999998876541 1257
Q ss_pred CEEEEec
Q 001096 1075 CAAAITL 1081 (1158)
Q Consensus 1075 ~~VIi~t 1081 (1158)
|++|-..
T Consensus 85 D~lv~~A 91 (260)
T 1x1t_A 85 DILVNNA 91 (260)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 7777654
No 433
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=76.77 E-value=2.2 Score=50.60 Aligned_cols=91 Identities=14% Similarity=0.216 Sum_probs=64.1
Q ss_pred cccccccccCCcccHHHHHHHHhhC-CC---CEEEEeCCchHHHHhhhCCCCEEEccCCCH---HHHHhcCccccCEEEE
Q 001096 1007 DLQDHIILCGFGRVGQIIAQLLSER-LI---PFVALDVRSDRVAIGRALDLPVYFGDAGSR---EVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1007 ~l~~hvVIiG~G~vG~~Ia~~L~e~-g~---~VvVID~d~~~v~~l~~~g~~vi~GDasd~---e~L~~AgI~~A~~VIi 1079 (1158)
.+++.++|+|+|.+|+.++..+.++ ++ .++++|.+....+.....|..+..-+.+.. +.+.++ +++.|.||
T Consensus 11 ~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aL-l~~~DvVI- 88 (480)
T 2ph5_A 11 LFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGST-LEENDFLI- 88 (480)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGG-CCTTCEEE-
T ss_pred cCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHH-hcCCCEEE-
Confidence 4577899999999999999999775 44 799999887654334444777766555444 335444 44557765
Q ss_pred ecCCchhhHHHHHHHHhhCC
Q 001096 1080 TLDTPGANYRTVWALSKYFP 1099 (1158)
Q Consensus 1080 ~t~dd~~Nl~i~l~ar~l~p 1099 (1158)
-...+..|+.+...+.+.+-
T Consensus 89 N~s~~~~~l~Im~acleaGv 108 (480)
T 2ph5_A 89 DVSIGISSLALIILCNQKGA 108 (480)
T ss_dssp ECCSSSCHHHHHHHHHHHTC
T ss_pred ECCccccCHHHHHHHHHcCC
Confidence 45566688888888888763
No 434
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=76.66 E-value=1 Score=49.11 Aligned_cols=65 Identities=11% Similarity=0.135 Sum_probs=36.2
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCcc-ccCEEEEecC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAE-RACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~-~A~~VIi~t~ 1082 (1158)
.+++|.|. |-+|..+++.|.+.|++|++++++++. .+ ++.||.+|++.+.++=-. +.|+||-+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC-
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 45788887 899999999999999999999976543 12 788999998876654211 4678776553
No 435
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=76.55 E-value=8 Score=43.33 Aligned_cols=94 Identities=17% Similarity=0.186 Sum_probs=64.0
Q ss_pred cccccccCCcccHHHHHHHHhhCCC-CEEEEeCC--chHHHH----hhh------CCCCEEEccCCCHHHHHhcCccccC
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVR--SDRVAI----GRA------LDLPVYFGDAGSREVLHKVGAERAC 1075 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d--~~~v~~----l~~------~g~~vi~GDasd~e~L~~AgI~~A~ 1075 (1158)
..++.|+|.|.+|..++..|...|+ +++++|.+ +++.+- +.+ ....+...+ + ...+++||
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d-----~~a~~~aD 80 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--D-----YADTADSD 80 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C-----GGGGTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C-----HHHhCCCC
Confidence 3579999999999999999999999 99999999 444321 111 122333222 1 23578999
Q ss_pred EEEEecCCc-----------hhhHH----HHHHHHhhCCCceEEEEecC
Q 001096 1076 AAAITLDTP-----------GANYR----TVWALSKYFPNVKTFVRAHD 1109 (1158)
Q Consensus 1076 ~VIi~t~dd-----------~~Nl~----i~l~ar~l~p~~~IIara~d 1109 (1158)
.||++.+.+ ..|.. ++..+.+..|+..+++..|=
T Consensus 81 vVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNP 129 (315)
T 3tl2_A 81 VVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNP 129 (315)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCCh
Confidence 999987544 23533 44567778899877666653
No 436
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=76.41 E-value=5.9 Score=37.43 Aligned_cols=69 Identities=7% Similarity=0.042 Sum_probs=46.2
Q ss_pred HHHhcCccccCEEEEecCCch-hhHHHHHHHHh--hCCCceEEEEecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1065 VLHKVGAERACAAAITLDTPG-ANYRTVWALSK--YFPNVKTFVRAHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1065 ~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~--l~p~~~IIara~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.+..+.-...+.+|+-..-+. .-+.++..+|+ .+++++||+.+... +......++|++.++........
T Consensus 44 a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~ 117 (147)
T 2zay_A 44 AVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIR 117 (147)
T ss_dssp HHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHH
T ss_pred HHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHH
Confidence 333333345788877765443 34567788888 67888888887754 45566678999998877655544
No 437
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=76.41 E-value=2.3 Score=46.18 Aligned_cols=72 Identities=11% Similarity=0.071 Sum_probs=53.3
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+.+.+ ....++.+|.+|++.++++= ..+.|++|-
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 85 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIP 85 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 35677775 569999999999999999999999988766533 24667789999988765431 125677665
Q ss_pred ec
Q 001096 1080 TL 1081 (1158)
Q Consensus 1080 ~t 1081 (1158)
..
T Consensus 86 nA 87 (281)
T 3zv4_A 86 NA 87 (281)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 438
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=76.39 E-value=14 Score=35.03 Aligned_cols=101 Identities=10% Similarity=0.063 Sum_probs=62.6
Q ss_pred CCCEEEEeCCchHHHHh----hhCCC--CEEEccCCCHHHHHhc---------CccccCEEEEecCCch-hhHHHHHHHH
Q 001096 1032 LIPFVALDVRSDRVAIG----RALDL--PVYFGDAGSREVLHKV---------GAERACAAAITLDTPG-ANYRTVWALS 1095 (1158)
Q Consensus 1032 g~~VvVID~d~~~v~~l----~~~g~--~vi~GDasd~e~L~~A---------gI~~A~~VIi~t~dd~-~Nl~i~l~ar 1095 (1158)
...|.+||.|+...+.+ ++.|+ .+... .+-.+.++.+ .-...+.+++-..-+. .-+.++..+|
T Consensus 4 ~~~ILivddd~~~~~~l~~~L~~~g~~~~v~~~-~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr 82 (152)
T 3heb_A 4 SVTIVMIEDDLGHARLIEKNIRRAGVNNEIIAF-TDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVK 82 (152)
T ss_dssp -CEEEEECCCHHHHHHHHHHHHHTTCCCCEEEE-SSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHhCCCcceEEEe-CCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHH
Confidence 35677888777655433 44565 34332 1223444433 2345777777665443 3466788888
Q ss_pred h--hCCCceEEEEecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1096 K--YFPNVKTFVRAHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1096 ~--l~p~~~IIara~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+ ..|+++||+.+... +......++|++.++........
T Consensus 83 ~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~ 124 (152)
T 3heb_A 83 ENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYEN 124 (152)
T ss_dssp HSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHH
T ss_pred hcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCCHHH
Confidence 8 67888888877654 45667788999998877665544
No 439
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=76.28 E-value=3.1 Score=44.11 Aligned_cols=72 Identities=13% Similarity=0.068 Sum_probs=53.4
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCc-hHHHH-hhhCC--CCEEEccCCCHHHHHhc------CccccCEEE
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRS-DRVAI-GRALD--LPVYFGDAGSREVLHKV------GAERACAAA 1078 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~-~~v~~-l~~~g--~~vi~GDasd~e~L~~A------gI~~A~~VI 1078 (1158)
+.++|.| .+.+|+.+++.|.++|++|+++++++ +..+. +++.+ ..++.+|.+|++.++++ ...+.|.+|
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 87 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILV 87 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4577776 46699999999999999999999998 66542 33333 55678999999987765 123577777
Q ss_pred Eec
Q 001096 1079 ITL 1081 (1158)
Q Consensus 1079 i~t 1081 (1158)
-..
T Consensus 88 ~nA 90 (249)
T 2ew8_A 88 NNA 90 (249)
T ss_dssp ECC
T ss_pred ECC
Confidence 654
No 440
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=76.27 E-value=2.9 Score=31.47 Aligned_cols=27 Identities=30% Similarity=0.428 Sum_probs=23.1
Q ss_pred hhHHHHHHHhhhHHHHHHHHHHHHHHH
Q 001096 286 NCETELRRLQSKKEELQKEVDRLNEVA 312 (1158)
Q Consensus 286 ~~~~~l~~~~~~~~~~q~~~~~~~~~~ 312 (1158)
..|+..+.|-.+|.+|++||.||.++.
T Consensus 5 QLE~kVEeLl~~n~~Le~eV~rLk~ll 31 (34)
T 2oxj_A 5 QLEXKVXELLXKNXHLEXEVXRLKXLV 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 457778889999999999999999864
No 441
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=76.25 E-value=1.8 Score=47.86 Aligned_cols=108 Identities=12% Similarity=-0.008 Sum_probs=65.9
Q ss_pred cccccccCCcccHHHHHHHHhhCCC-CEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh-
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA- 1086 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~- 1086 (1158)
.++++|+|.|..|+.++..|.+.|. +|+++++++++.+.+... +..+ ..+.+.++ +.++|.||-+|+....
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~-~~~~-----~~~~~~~~-~~~aDiVInaTp~Gm~~ 189 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN-INKI-----NLSHAESH-LDEFDIIINTTPAGMNG 189 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC-CEEE-----CHHHHHHT-GGGCSEEEECCC-----
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh-cccc-----cHhhHHHH-hcCCCEEEECccCCCCC
Confidence 3578999999999999999999998 899999999887766532 2222 23344443 6789999988865311
Q ss_pred hHHHHHHHHhhCCCceEEEEecChhhHH---HHHHCCCCe
Q 001096 1087 NYRTVWALSKYFPNVKTFVRAHDIDHGL---NLEKAGATA 1123 (1158)
Q Consensus 1087 Nl~i~l~ar~l~p~~~IIara~d~e~~~---~L~~aGAd~ 1123 (1158)
+.........+.|..-++=.+.++.... ..++.|+..
T Consensus 190 ~~~~~l~~~~l~~~~~V~D~vY~P~~T~ll~~A~~~G~~~ 229 (277)
T 3don_A 190 NTDSVISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNPI 229 (277)
T ss_dssp --CCSSCCTTCCSSCEEEESCCSSSSCHHHHHHHHTTCCE
T ss_pred CCcCCCCHHHcCCCCEEEEecCCCCCCHHHHHHHHCcCEE
Confidence 1000011122334433343445554443 446678854
No 442
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=76.25 E-value=2.5 Score=45.98 Aligned_cols=73 Identities=16% Similarity=0.019 Sum_probs=54.5
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++.+++..+...+ .....+.+|.+|++.++++= ..+.|++|-
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 107 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVN 107 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45677775 569999999999999999999999887765533 24567789999998876541 125677776
Q ss_pred ecC
Q 001096 1080 TLD 1082 (1158)
Q Consensus 1080 ~t~ 1082 (1158)
..+
T Consensus 108 nAg 110 (277)
T 4dqx_A 108 NAG 110 (277)
T ss_dssp CCC
T ss_pred CCC
Confidence 544
No 443
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=76.23 E-value=6.8 Score=43.72 Aligned_cols=124 Identities=15% Similarity=0.114 Sum_probs=73.9
Q ss_pred ccccccCCcccHHHHHHHHhhC-CCCEE-EEeCCchHHHHhh-hCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~-g~~Vv-VID~d~~~v~~l~-~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
-++.|+|.|.+|...++.|.+. +.+++ +.|.++++.+... ..|.++ + .|.+.+.+ -.++|+|+++++++..
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~-~---~~~~~~l~--~~~~D~V~i~tp~~~h 78 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEA-V---ASPDEVFA--RDDIDGIVIGSPTSTH 78 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEE-E---SSHHHHTT--CSCCCEEEECSCGGGH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCce-e---CCHHHHhc--CCCCCEEEEeCCchhh
Confidence 3588999999999999999875 66766 7899999887654 346433 3 33333322 2478999999988744
Q ss_pred hHHHHHHHHhhCCCceEEEE---ecChhhHHHH----HHCCCCeeecC--CcHHHHHHHHHHHHh
Q 001096 1087 NYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVPE--TLEPSLQLAAAVLAQ 1142 (1158)
Q Consensus 1087 Nl~i~l~ar~l~p~~~IIar---a~d~e~~~~L----~~aGAd~VI~p--~~~a~~~LA~~vl~~ 1142 (1158)
...+..+-+.+ ..|++. +.+.+....+ ++.|....+.. ...+...-++.++..
T Consensus 79 -~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~ 140 (344)
T 3euw_A 79 -VDLITRAVERG--IPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVAN 140 (344)
T ss_dssp -HHHHHHHHHTT--CCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHT
T ss_pred -HHHHHHHHHcC--CcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhc
Confidence 33444444444 355553 3444444443 34454333321 223445555555543
No 444
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=76.22 E-value=3.6 Score=44.49 Aligned_cols=72 Identities=11% Similarity=0.016 Sum_probs=53.1
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhCC--CCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RALD--LPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~g--~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +.+|+.+++.|.++|.+|++++++++..+.. ++.| ..++.+|.+|++.++++= ....|+
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 102 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV 102 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45677764 5699999999999999999999998765433 2223 566789999998776541 125788
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 103 lv~~A 107 (277)
T 2rhc_B 103 LVNNA 107 (277)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77654
No 445
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=76.19 E-value=12 Score=42.33 Aligned_cols=82 Identities=16% Similarity=0.108 Sum_probs=51.2
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhHH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYR 1089 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl~ 1089 (1158)
..+-|+|+|++|+.+++.|...|.+|++.|++++. ..+... ..+.+.+ ++++|.|++.++....+..
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~-----~~~~~~----~~sl~el----l~~aDvVil~vP~t~~t~~ 238 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS-----GVDWIA----HQSPVDL----ARDSDVLAVCVAASAATQN 238 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT-----TSCCEE----CSSHHHH----HHTCSEEEECC--------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc-----ccCcee----cCCHHHH----HhcCCEEEEeCCCCHHHHH
Confidence 45889999999999999999999999999988764 122211 2233333 3478999999885543332
Q ss_pred H--HHHHHhhCCCceEE
Q 001096 1090 T--VWALSKYFPNVKTF 1104 (1158)
Q Consensus 1090 i--~l~ar~l~p~~~II 1104 (1158)
+ ...+....|...+|
T Consensus 239 li~~~~l~~mk~gailI 255 (340)
T 4dgs_A 239 IVDASLLQALGPEGIVV 255 (340)
T ss_dssp --CHHHHHHTTTTCEEE
T ss_pred HhhHHHHhcCCCCCEEE
Confidence 2 34455556654443
No 446
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=76.02 E-value=8 Score=43.72 Aligned_cols=97 Identities=13% Similarity=0.037 Sum_probs=66.2
Q ss_pred ccccccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHHHh----hhC----CCCEEEccCCCHHHHHhcCccccCEE
Q 001096 1008 LQDHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIG----RAL----DLPVYFGDAGSREVLHKVGAERACAA 1077 (1158)
Q Consensus 1008 l~~hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~~l----~~~----g~~vi~GDasd~e~L~~AgI~~A~~V 1077 (1158)
...++.|+|.|.+|..++..|...|. +++++|.++++.+.. .+. ...-+.+- .| ++ .+++||.|
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t-~d---~~--~~~daDiV 93 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSG-KD---YS--VSAGSKLV 93 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEE-SS---SC--SCSSCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEc-CC---HH--HhCCCCEE
Confidence 35679999999999999999998887 899999998876431 111 12222221 11 11 37899999
Q ss_pred EEecCCc-----------hhhHH----HHHHHHhhCCCceEEEEecCh
Q 001096 1078 AITLDTP-----------GANYR----TVWALSKYFPNVKTFVRAHDI 1110 (1158)
Q Consensus 1078 Ii~t~dd-----------~~Nl~----i~l~ar~l~p~~~IIara~d~ 1110 (1158)
|++.+.+ ..|.. ++..+.+..|+..+++..|=.
T Consensus 94 IitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPv 141 (330)
T 3ldh_A 94 VITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELG 141 (330)
T ss_dssp EECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCcc
Confidence 9886543 35544 445777789998777766543
No 447
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=77.85 E-value=0.54 Score=49.21 Aligned_cols=66 Identities=14% Similarity=0.073 Sum_probs=47.9
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG 1085 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~ 1085 (1158)
..+.|+|.|.+|..+++.|.+.|++|+++|++++ .+.+...|..+. | ..+ -++++|+|++++..+.
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~--~--~~~-----~~~~aDvVilav~~~~ 85 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVL--C--YSE-----AASRSDVIVLAVHREH 85 (201)
Confidence 3588999999999999999999999999999877 444443343221 1 111 1347899999998753
No 448
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=76.00 E-value=7.3 Score=43.73 Aligned_cols=124 Identities=16% Similarity=0.139 Sum_probs=77.8
Q ss_pred cccccccCCcccHHHHHHHHhhC--CCCEE-EEeCCchHHHHhh-hCCCCEEEccCCCHH-HHHhcCccccCEEEEecCC
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSER--LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSRE-VLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~--g~~Vv-VID~d~~~v~~l~-~~g~~vi~GDasd~e-~L~~AgI~~A~~VIi~t~d 1083 (1158)
+-.+.|+|.|.+|...++.|.+. +.+++ +.|.++++.+.+. +.|.+ .+ +|.+ .+.. .+.|+|++++++
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~-~~---~~~~~ll~~---~~~D~V~i~tp~ 85 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGAR-GH---ASLTDMLAQ---TDADIVILTTPS 85 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCE-EE---SCHHHHHHH---CCCSEEEECSCG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCc-ee---CCHHHHhcC---CCCCEEEECCCc
Confidence 35699999999999999999886 66755 7899999887664 34653 33 3433 3433 368999999998
Q ss_pred chhhHHHHHHHHhhCCCceEEEE---ecChhhHHHH----HHCCCCeeecCC--cHHHHHHHHHHHHh
Q 001096 1084 PGANYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVPET--LEPSLQLAAAVLAQ 1142 (1158)
Q Consensus 1084 d~~Nl~i~l~ar~l~p~~~IIar---a~d~e~~~~L----~~aGAd~VI~p~--~~a~~~LA~~vl~~ 1142 (1158)
+.. ...+..+-+.+ ..|++. +.+.+....+ ++.|....+... ..+...-++.++..
T Consensus 86 ~~h-~~~~~~al~~g--k~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~ 150 (354)
T 3q2i_A 86 GLH-PTQSIECSEAG--FHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQE 150 (354)
T ss_dssp GGH-HHHHHHHHHTT--CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHT
T ss_pred HHH-HHHHHHHHHCC--CCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhc
Confidence 743 33333343333 456653 3454444443 556766554332 44555556666554
No 449
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=75.95 E-value=2.4 Score=45.14 Aligned_cols=73 Identities=14% Similarity=0.030 Sum_probs=54.4
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh---CCCCEEEccCCCHHHHHhcC------ccccCEEEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA---LDLPVYFGDAGSREVLHKVG------AERACAAAI 1079 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~---~g~~vi~GDasd~e~L~~Ag------I~~A~~VIi 1079 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+...+ .....+.+|.+|++.++++= ..+.|.+|-
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 89 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVN 89 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45777776 569999999999999999999999887665432 23567889999998776541 125677776
Q ss_pred ecC
Q 001096 1080 TLD 1082 (1158)
Q Consensus 1080 ~t~ 1082 (1158)
..+
T Consensus 90 nAg 92 (248)
T 3op4_A 90 NAG 92 (248)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 450
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=75.73 E-value=2.3 Score=45.50 Aligned_cols=72 Identities=13% Similarity=0.042 Sum_probs=53.1
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----hC--CCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~~--g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+... +. ...++.+|.+|++.++++= ..+.|+
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 92 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITV 92 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45677775 56999999999999999999999988765442 22 4566789999998765431 125677
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 93 lv~nA 97 (256)
T 3gaf_A 93 LVNNA 97 (256)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 76554
No 451
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=75.71 E-value=6.5 Score=44.06 Aligned_cols=93 Identities=18% Similarity=0.175 Sum_probs=63.3
Q ss_pred ccccccCCcccHHHHHHHHhhCCC-CEEEEeCCchHHHHh----hh------CCCCEEE-ccCCCHHHHHhcCccccCEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIG----RA------LDLPVYF-GDAGSREVLHKVGAERACAA 1077 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~~~v~~l----~~------~g~~vi~-GDasd~e~L~~AgI~~A~~V 1077 (1158)
..+.|+|.|.+|..++..|...|+ +|+++|.|+++.+.. .+ ....+.. +| + ..+++||.|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d------~--~al~~aD~V 76 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT------Y--DDLAGADVV 76 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC------G--GGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCC------H--HHhCCCCEE
Confidence 368899999999999999999988 899999999876532 11 1222332 33 1 236789999
Q ss_pred EEecCCch----------------hhH----HHHHHHHhhCCCceEEEEecCh
Q 001096 1078 AITLDTPG----------------ANY----RTVWALSKYFPNVKTFVRAHDI 1110 (1158)
Q Consensus 1078 Ii~t~dd~----------------~Nl----~i~l~ar~l~p~~~IIara~d~ 1110 (1158)
|++.+-+. .|. .++..+.+..|+..++..+|-.
T Consensus 77 i~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~ 129 (322)
T 1t2d_A 77 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPV 129 (322)
T ss_dssp EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSH
T ss_pred EEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCCh
Confidence 99973321 132 3455667778988777655433
No 452
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=75.71 E-value=6.3 Score=44.00 Aligned_cols=95 Identities=9% Similarity=0.001 Sum_probs=65.5
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC-------CCCEEEccCCCHHHHHhcCccccCEEEEec
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-------DLPVYFGDAGSREVLHKVGAERACAAAITL 1081 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~-------g~~vi~GDasd~e~L~~AgI~~A~~VIi~t 1081 (1158)
..+|+.+|.|..+......-+..|..|+.||.+++.++.+++. ++.++.||+.+.. -...|+|++..
T Consensus 123 g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~------d~~FDvV~~~a 196 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID------GLEFDVLMVAA 196 (298)
T ss_dssp TCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG------GCCCSEEEECT
T ss_pred cCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC------CCCcCEEEECC
Confidence 4578889998754332222223588999999999998776542 4678899998632 25789988765
Q ss_pred CCchhhHHHHHHHHhhCCCceEEEEecC
Q 001096 1082 DTPGANYRTVWALSKYFPNVKTFVRAHD 1109 (1158)
Q Consensus 1082 ~dd~~Nl~i~l~ar~l~p~~~IIara~d 1109 (1158)
.-+...-......|.+.|.-+++++..+
T Consensus 197 ~~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 197 LAEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp TCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 4333334556677778999899887654
No 453
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=75.64 E-value=2.8 Score=44.60 Aligned_cols=60 Identities=13% Similarity=0.152 Sum_probs=46.1
Q ss_pred ccccccCC-cccHHHHHHHHhh---CCCCEEEEeCCchHHHHhhh--------CCCCEEEccCCCHHHHHhc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSE---RLIPFVALDVRSDRVAIGRA--------LDLPVYFGDAGSREVLHKV 1069 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e---~g~~VvVID~d~~~v~~l~~--------~g~~vi~GDasd~e~L~~A 1069 (1158)
+.++|.|. +.+|+.+++.|.+ .|..|++++++++..+...+ ..+.++.+|.+|++.++++
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~ 78 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRL 78 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHH
Confidence 45677775 5699999999998 89999999999877654421 1356778999999876543
No 454
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=75.62 E-value=17 Score=32.68 Aligned_cols=99 Identities=10% Similarity=0.013 Sum_probs=59.7
Q ss_pred CEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEEec
Q 001096 1034 PFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRAH 1108 (1158)
Q Consensus 1034 ~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIara~ 1108 (1158)
.+.++|.|+..... +...|+.+...+ +..+.+..+.-...+.+++-..-+. .-+.++..+|+..|.+++++.+.
T Consensus 2 ~ilivdd~~~~~~~l~~~l~~~g~~v~~~~-~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 80 (121)
T 2pl1_A 2 RVLVVEDNALLRHHLKVQIQDAGHQVDDAE-DAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTA 80 (121)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEES
T ss_pred eEEEEeCcHHHHHHHHHHHhhcCCEEEEeC-CHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEec
Confidence 36677766654432 234566544321 1233444443345788777655443 33567778888888888888776
Q ss_pred Ch--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1109 DI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1109 d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
+. +......++|++..+........
T Consensus 81 ~~~~~~~~~~~~~g~~~~l~kp~~~~~ 107 (121)
T 2pl1_A 81 RESWQDKVEVLSAGADDYVTKPFHIEE 107 (121)
T ss_dssp CCCHHHHHHHHHTTCSEEEESSCCHHH
T ss_pred CCCHHHHHHHHHcCccceEECCCCHHH
Confidence 54 45566778999888766555544
No 455
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=75.54 E-value=2.8 Score=46.03 Aligned_cols=73 Identities=14% Similarity=0.084 Sum_probs=54.7
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC--CCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~--g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+.. +.. ...++.+|.+|++.++++= ..+.|+
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 111 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDV 111 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence 45777775 5699999999999999999999998876544 223 4567789999998876541 125677
Q ss_pred EEEecC
Q 001096 1077 AAITLD 1082 (1158)
Q Consensus 1077 VIi~t~ 1082 (1158)
+|-..+
T Consensus 112 lvnnAg 117 (301)
T 3tjr_A 112 VFSNAG 117 (301)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 776544
No 456
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=75.51 E-value=2.8 Score=43.81 Aligned_cols=72 Identities=13% Similarity=0.035 Sum_probs=52.6
Q ss_pred cccccCC-cccHHHHHHHHhhCCCCEEEE-eCCchHHHHh----hhC--CCCE-EEccCCCHHHHHhcC------ccccC
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERLIPFVAL-DVRSDRVAIG----RAL--DLPV-YFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g~~VvVI-D~d~~~v~~l----~~~--g~~v-i~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
.++|.|. |.+|+.+++.|.++|++|+++ +++++..+.. +.. .... +.+|.+|++.++++= ..+.|
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLD 82 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCCC
Confidence 4677764 679999999999999999998 7887765543 222 3445 789999999887651 23577
Q ss_pred EEEEecC
Q 001096 1076 AAAITLD 1082 (1158)
Q Consensus 1076 ~VIi~t~ 1082 (1158)
++|-...
T Consensus 83 ~li~~Ag 89 (245)
T 2ph3_A 83 TLVNNAG 89 (245)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8776543
No 457
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=75.47 E-value=2.5 Score=47.70 Aligned_cols=65 Identities=15% Similarity=0.217 Sum_probs=49.4
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
..+.|+|+|.+|+.+++.|...|.+|++.|.+++. +...+.|.. . .+.+.+ +.++|.|++.++..
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~--~---~~l~e~----l~~aDiVil~vp~~ 211 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKAR--Y---MDIDEL----LEKSDIVILALPLT 211 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEE--E---CCHHHH----HHHCSEEEECCCCC
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCce--e---cCHHHH----HhhCCEEEEcCCCC
Confidence 35889999999999999999999999999999876 444444532 2 233322 24789999999876
No 458
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=75.46 E-value=2 Score=46.52 Aligned_cols=74 Identities=11% Similarity=-0.006 Sum_probs=53.8
Q ss_pred cccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC---CCCEEEccCCCH-HHHHhcC------ccc
Q 001096 1009 QDHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL---DLPVYFGDAGSR-EVLHKVG------AER 1073 (1158)
Q Consensus 1009 ~~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~---g~~vi~GDasd~-e~L~~Ag------I~~ 1073 (1158)
.+.++|.|. +-+|..+++.|.++|..|+++++++++.+.. .+. .+.++.+|.+|+ +.++++- ..+
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~ 91 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGK 91 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSS
T ss_pred CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCC
Confidence 346778886 5699999999999999999999998775433 222 356788999997 5543321 136
Q ss_pred cCEEEEecC
Q 001096 1074 ACAAAITLD 1082 (1158)
Q Consensus 1074 A~~VIi~t~ 1082 (1158)
.|++|-..+
T Consensus 92 iD~lv~nAg 100 (311)
T 3o26_A 92 LDILVNNAG 100 (311)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 788776654
No 459
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=75.46 E-value=15 Score=33.52 Aligned_cols=101 Identities=8% Similarity=0.037 Sum_probs=61.2
Q ss_pred CCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhh--CCCceEEE
Q 001096 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKY--FPNVKTFV 1105 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l--~p~~~IIa 1105 (1158)
..+.++|.|+...+.+ ...|+..+..-.+-.+.+..+.-...+.+++-..-+. .-+.++..+|+. .|+++|++
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ 86 (129)
T 1p6q_A 7 IKVLIVDDQVTSRLLLGDALQQLGFKQITAAGDGEQGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFII 86 (129)
T ss_dssp CCEEEECSSHHHHHHHHHHHHTTTCSCEECCSSHHHHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEE
Confidence 5688888877654332 4456633322222344555554456788877665543 335567777765 46788887
Q ss_pred EecCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1106 RAHDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1106 ra~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.+... +......+.|++..+........
T Consensus 87 ~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~ 116 (129)
T 1p6q_A 87 LTAQGDRALVQKAAALGANNVLAKPFTIEK 116 (129)
T ss_dssp CCSCCCHHHHHHHHHHTCSCEECCCSSHHH
T ss_pred EeCCCCHHHHHHHHHcCCCEEEECCCCHHH
Confidence 76544 45566778899888776655544
No 460
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=75.44 E-value=15 Score=37.80 Aligned_cols=104 Identities=9% Similarity=0.050 Sum_probs=67.1
Q ss_pred cCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-------CCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh-
Q 001096 1015 CGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-------LDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA- 1086 (1158)
Q Consensus 1015 iG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-------~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~- 1086 (1158)
||.|.++..+++..- +..|+.||.+++.++.+++ .++.++.||+.+.. ....-...|.|++...++..
T Consensus 50 cG~G~~~~~la~~~p--~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~~D~i~~~~~~~~~~ 125 (214)
T 1yzh_A 50 SGKGAFVSGMAKQNP--DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLT--DYFEDGEIDRLYLNFSDPWPK 125 (214)
T ss_dssp CTTSHHHHHHHHHCT--TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGG--GTSCTTCCSEEEEESCCCCCS
T ss_pred cCcCHHHHHHHHHCC--CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHH--hhcCCCCCCEEEEECCCCccc
Confidence 566666666665532 5689999999998876643 35678999998721 11333468888888776421
Q ss_pred ----------hHHHHHHHHhhCCCceEEEEecChhh----HHHHHHCCCC
Q 001096 1087 ----------NYRTVWALSKYFPNVKTFVRAHDIDH----GLNLEKAGAT 1122 (1158)
Q Consensus 1087 ----------Nl~i~l~ar~l~p~~~IIara~d~e~----~~~L~~aGAd 1122 (1158)
.-.+....+.+.|+-.++....+... .+.+.+.|-.
T Consensus 126 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~ 175 (214)
T 1yzh_A 126 KRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMK 175 (214)
T ss_dssp GGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCE
T ss_pred cchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCe
Confidence 13444556667888888887766443 3455666743
No 461
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=75.43 E-value=2.6 Score=45.79 Aligned_cols=72 Identities=18% Similarity=0.158 Sum_probs=53.4
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC--CCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~--g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+.. +.. .+.++.+|.+|++.++++= ..+.|.
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 104 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGI 104 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 45777775 5699999999999999999999998876543 233 4566789999998765431 125677
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 105 lv~nA 109 (279)
T 3sju_A 105 LVNSA 109 (279)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 76554
No 462
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=75.40 E-value=2.2 Score=46.20 Aligned_cols=72 Identities=18% Similarity=0.108 Sum_probs=53.5
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhCC--CCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RALD--LPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~g--~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +-+|+.+++.|.+.|..|++++++++..+.. +..+ ..++.+|.+|++.++++- ..+.|+
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 84 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDV 84 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45778876 5699999999999999999999998876544 2333 456679999998876541 125677
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
+|-..
T Consensus 85 lVnnA 89 (264)
T 3tfo_A 85 LVNNA 89 (264)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 76654
No 463
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=75.39 E-value=2.6 Score=45.23 Aligned_cols=73 Identities=12% Similarity=0.035 Sum_probs=53.0
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh----h-C---CCCEEEccCCCHHHHHhcC------cccc
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR----A-L---DLPVYFGDAGSREVLHKVG------AERA 1074 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~----~-~---g~~vi~GDasd~e~L~~Ag------I~~A 1074 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+... . . ...++.+|.+|++..+++= ..+.
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 88 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA 88 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 45777775 56999999999999999999999988765432 2 1 2567789999998765431 1256
Q ss_pred CEEEEecC
Q 001096 1075 CAAAITLD 1082 (1158)
Q Consensus 1075 ~~VIi~t~ 1082 (1158)
|++|-..+
T Consensus 89 d~lvnnAg 96 (265)
T 3lf2_A 89 SILVNNAG 96 (265)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 77766543
No 464
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=75.33 E-value=3 Score=46.32 Aligned_cols=82 Identities=15% Similarity=0.105 Sum_probs=55.0
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh--
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-- 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N-- 1087 (1158)
..+.|+|+|.+|+.+++.|...|.+|++.|++++..+. .. ...+.+.+ +.++|.|++.++....+
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~----~~~~l~el----l~~aDiV~l~~P~t~~t~~ 189 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----DV----ISESPADL----FRQSDFVLIAIPLTDKTRG 189 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----SE----ECSSHHHH----HHHCSEEEECCCCCTTTTT
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----cc----ccCChHHH----hhccCeEEEEeeccccchh
Confidence 45889999999999999999999999999998764321 11 12244333 34699999999864332
Q ss_pred HHHHHHHHhhCCCceEE
Q 001096 1088 YRTVWALSKYFPNVKTF 1104 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~II 1104 (1158)
+.-...+....|...+|
T Consensus 190 li~~~~l~~mk~gailI 206 (290)
T 3gvx_A 190 MVNSRLLANARKNLTIV 206 (290)
T ss_dssp CBSHHHHTTCCTTCEEE
T ss_pred hhhHHHHhhhhcCceEE
Confidence 22233445556664444
No 465
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=75.32 E-value=5.6 Score=44.29 Aligned_cols=125 Identities=16% Similarity=0.105 Sum_probs=77.7
Q ss_pred ccccccCCcccHHHHHHHHhhC-CCCEE-EEeCCchHHHHhh-hCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh
Q 001096 1010 DHIILCGFGRVGQIIAQLLSER-LIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~-g~~Vv-VID~d~~~v~~l~-~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~ 1086 (1158)
-++.|+|.|.+|...++.|.+. +.+++ +.|.++++.+.+. +.|.+..+ .|.+.+.. -.+.|+|+++++++..
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~---~~~~~ll~--~~~~D~V~i~tp~~~h 80 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAY---GSYEELCK--DETIDIIYIPTYNQGH 80 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCB---SSHHHHHH--CTTCSEEEECCCGGGH
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCcee---CCHHHHhc--CCCCCEEEEcCCCHHH
Confidence 4688999999999999999884 56666 6799999887654 44553233 34444433 2368999999998843
Q ss_pred hHHHHHHHHhhCCCceEEEE---ecChhhHHHH----HHCCCCeeecC--CcHHHHHHHHHHHHh
Q 001096 1087 NYRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVPE--TLEPSLQLAAAVLAQ 1142 (1158)
Q Consensus 1087 Nl~i~l~ar~l~p~~~IIar---a~d~e~~~~L----~~aGAd~VI~p--~~~a~~~LA~~vl~~ 1142 (1158)
...+..+-+.+ ..|++. +.+.+..+.+ ++.|....+.. ...+...-++.++..
T Consensus 81 -~~~~~~al~~g--k~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~ 142 (330)
T 3e9m_A 81 -YSAAKLALSQG--KPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQE 142 (330)
T ss_dssp -HHHHHHHHHTT--CCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHT
T ss_pred -HHHHHHHHHCC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhC
Confidence 34444444444 355552 3454444443 55676555433 244556666666654
No 466
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=75.28 E-value=1.3 Score=49.81 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=31.0
Q ss_pred cccccCCcccHHHHHHHHhhCCCCEEEEeCCch
Q 001096 1011 HIILCGFGRVGQIIAQLLSERLIPFVALDVRSD 1043 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~ 1043 (1158)
+|+|+|.|..|..++-.|.++|++|+|+|+++.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 689999999999999999999999999998764
No 467
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=75.27 E-value=2.5 Score=47.84 Aligned_cols=82 Identities=13% Similarity=0.130 Sum_probs=54.3
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh--
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN-- 1087 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N-- 1087 (1158)
..+.|+|+|.+|+.+++.|...|.+|++.|++++... |... . .+.+.+ +.++|.|++.++.....
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g~~~-~---~~l~el----l~~aDvVil~vP~~~~t~~ 231 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT-----NYTY-Y---GSVVEL----ASNSDILVVACPLTPETTH 231 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC-----CSEE-E---SCHHHH----HHTCSEEEECSCCCGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc-----Ccee-c---CCHHHH----HhcCCEEEEecCCChHHHH
Confidence 3588999999999999999999999999999876421 3321 1 233332 34789999999875322
Q ss_pred HHHHHHHHhhCCCceEE
Q 001096 1088 YRTVWALSKYFPNVKTF 1104 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~II 1104 (1158)
+.-...+....|+..+|
T Consensus 232 li~~~~l~~mk~gailI 248 (333)
T 3ba1_A 232 IINREVIDALGPKGVLI 248 (333)
T ss_dssp CBCHHHHHHHCTTCEEE
T ss_pred HhhHHHHhcCCCCCEEE
Confidence 21122344455554443
No 468
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=75.20 E-value=2.6 Score=44.96 Aligned_cols=73 Identities=12% Similarity=0.053 Sum_probs=54.6
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcC-----ccccCEEEEecC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVG-----AERACAAAITLD 1082 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~Ag-----I~~A~~VIi~t~ 1082 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++.+.+...........++.+|.+|++.++++- ..+.|++|-..+
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~nAg 88 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNCAG 88 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECGG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 45677775 66999999999999999999999877654433445778899999998876541 126777776543
No 469
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=75.12 E-value=2.5 Score=44.82 Aligned_cols=73 Identities=10% Similarity=0.053 Sum_probs=52.7
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeC-CchHHHHh----hhC--CCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDV-RSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~-d~~~v~~l----~~~--g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.| .|.+|+.+++.|.++|++|+++++ +++..+.. ... ...++.+|.+|++.++++= ..+.|
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD 87 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3577776 567999999999999999999999 76655433 222 3567889999998876541 12568
Q ss_pred EEEEecC
Q 001096 1076 AAAITLD 1082 (1158)
Q Consensus 1076 ~VIi~t~ 1082 (1158)
+||-...
T Consensus 88 ~li~~Ag 94 (261)
T 1gee_A 88 VMINNAG 94 (261)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8776543
No 470
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=75.01 E-value=5.1 Score=44.36 Aligned_cols=111 Identities=12% Similarity=-0.096 Sum_probs=68.2
Q ss_pred ccccccCCcccHHHHHHHHhhCCC-CEEEEeCCchHHHHhhhC-CCCEEEccCCCHHHHHhcCccccCEEEEecCCchh-
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRAL-DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA- 1086 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~~~v~~l~~~-g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~- 1086 (1158)
.+++|+|.|..|+.++..|.+.|. +|+++++++++.+.+.+. +... ++..+.+.+.+ .+.++|.||.+++....
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~~~~~~~~~~-~~~~aDivIn~t~~~~~~ 218 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--SAYFSLAEAET-RLAEYDIIINTTSVGMHP 218 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--CCEECHHHHHH-TGGGCSEEEECSCTTCSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--CceeeHHHHHh-hhccCCEEEECCCCCCCC
Confidence 469999999999999999999998 899999999888766432 3210 01222233433 35689999999986532
Q ss_pred hHH-HHHHHHhhCCCceEEEEecChh---hHHHHHHCCCCe
Q 001096 1087 NYR-TVWALSKYFPNVKTFVRAHDID---HGLNLEKAGATA 1123 (1158)
Q Consensus 1087 Nl~-i~l~ar~l~p~~~IIara~d~e---~~~~L~~aGAd~ 1123 (1158)
+.. .......+.+...++=.+.++. ..+..++.|+..
T Consensus 219 ~~~~~~i~~~~l~~~~~v~D~~y~P~~T~ll~~A~~~G~~~ 259 (297)
T 2egg_A 219 RVEVQPLSLERLRPGVIVSDIIYNPLETKWLKEAKARGARV 259 (297)
T ss_dssp CCSCCSSCCTTCCTTCEEEECCCSSSSCHHHHHHHHTTCEE
T ss_pred CCCCCCCCHHHcCCCCEEEEcCCCCCCCHHHHHHHHCcCEE
Confidence 100 0000111334444444444444 345557789853
No 471
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=75.01 E-value=3.7 Score=43.44 Aligned_cols=73 Identities=14% Similarity=0.061 Sum_probs=52.8
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeC-CchHHHHh----hhC--CCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDV-RSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~-d~~~v~~l----~~~--g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.|. +.+|+.+++.|.++|++|+++++ +++..+.. +.. ...++.+|.+|++.++++= ..+.|
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 84 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD 84 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 35777774 67999999999999999999998 77665433 222 3566789999998876541 12577
Q ss_pred EEEEecC
Q 001096 1076 AAAITLD 1082 (1158)
Q Consensus 1076 ~VIi~t~ 1082 (1158)
++|-..+
T Consensus 85 ~lv~nAg 91 (246)
T 2uvd_A 85 ILVNNAG 91 (246)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7776543
No 472
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=74.87 E-value=3.3 Score=31.10 Aligned_cols=27 Identities=19% Similarity=0.222 Sum_probs=23.4
Q ss_pred hhHHHHHHHhhhHHHHHHHHHHHHHHH
Q 001096 286 NCETELRRLQSKKEELQKEVDRLNEVA 312 (1158)
Q Consensus 286 ~~~~~l~~~~~~~~~~q~~~~~~~~~~ 312 (1158)
..|+..+.|-.+|.+|+.||.||.++.
T Consensus 5 QLEdKVEeLl~~~~~Le~EV~RLk~ll 31 (34)
T 3c3f_A 5 QIEXKLEXILSXLYHXENEXARIXKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 457788889999999999999999864
No 473
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=74.77 E-value=2.5 Score=44.29 Aligned_cols=73 Identities=10% Similarity=-0.007 Sum_probs=54.3
Q ss_pred ccccccC-CcccHHHHHHHHhhCCC-------CEEEEeCCchHHHHhh----hC--CCCEEEccCCCHHHHHhcC-----
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLI-------PFVALDVRSDRVAIGR----AL--DLPVYFGDAGSREVLHKVG----- 1070 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~-------~VvVID~d~~~v~~l~----~~--g~~vi~GDasd~e~L~~Ag----- 1070 (1158)
+.++|.| .|.+|+.+++.|.++|+ .|++++++++..+.+. .. .+.++.+|.+|++.++++-
T Consensus 3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 82 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence 3467777 46799999999999999 8999999987765442 22 3567889999998876542
Q ss_pred -ccccCEEEEecC
Q 001096 1071 -AERACAAAITLD 1082 (1158)
Q Consensus 1071 -I~~A~~VIi~t~ 1082 (1158)
..+.|+||-..+
T Consensus 83 ~~g~id~li~~Ag 95 (244)
T 2bd0_A 83 RYGHIDCLVNNAG 95 (244)
T ss_dssp HTSCCSEEEECCC
T ss_pred hCCCCCEEEEcCC
Confidence 126788877543
No 474
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=74.74 E-value=1.7 Score=42.82 Aligned_cols=104 Identities=15% Similarity=0.140 Sum_probs=63.7
Q ss_pred cccccccCC----cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCc
Q 001096 1009 QDHIILCGF----GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1009 ~~hvVIiG~----G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
...+.++|. |++|..+++.|.+.|++|..++++.+.+ .|.+++ .+. .++. +.+|.+++++++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----~G~~~~-~s~------~el~-~~vDlvii~vp~- 79 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----EGLKCY-RSV------RELP-KDVDVIVFVVPP- 79 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----TTEECB-SSG------GGSC-TTCCEEEECSCH-
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----CCeeec-CCH------HHhC-CCCCEEEEEeCH-
Confidence 446899999 9999999999999999877777654322 243322 111 2221 268999999985
Q ss_pred hhhHHHHHHHHhhCCCceEEEEe--cChhhHHHHHHCCCCeeecCC
Q 001096 1085 GANYRTVWALSKYFPNVKTFVRA--HDIDHGLNLEKAGATAVVPET 1128 (1158)
Q Consensus 1085 ~~Nl~i~l~ar~l~p~~~IIara--~d~e~~~~L~~aGAd~VI~p~ 1128 (1158)
..-..++..+.+..+. .++.-. ...+..+..++.|+. ++-|+
T Consensus 80 ~~v~~v~~~~~~~g~~-~i~~~~~~~~~~l~~~a~~~Gi~-~igpn 123 (138)
T 1y81_A 80 KVGLQVAKEAVEAGFK-KLWFQPGAESEEIRRFLEKAGVE-YSFGR 123 (138)
T ss_dssp HHHHHHHHHHHHTTCC-EEEECTTSCCHHHHHHHHHHTCE-EECSC
T ss_pred HHHHHHHHHHHHcCCC-EEEEcCccHHHHHHHHHHHCCCE-EEcCC
Confidence 4444455445455543 233322 234556666667765 34444
No 475
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=74.74 E-value=4.6 Score=44.22 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=57.4
Q ss_pred cccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCC-HHHHHhcCccccCEEEEecCCc
Q 001096 1009 QDHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGS-REVLHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1009 ~~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd-~e~L~~AgI~~A~~VIi~t~dd 1084 (1158)
.+.++|.|. |.+|..+++.++..|.+|++++.++++.+.+++.|...+. |..+ .+..++. ..+|.++- ++.+
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~-~~~~~~~~~~~~--~~~d~vid-~g~~ 199 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAA-TYAEVPERAKAW--GGLDLVLE-VRGK 199 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEE-EGGGHHHHHHHT--TSEEEEEE-CSCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEE-ECCcchhHHHHh--cCceEEEE-CCHH
Confidence 356899998 9999999999999999999999999998888888876553 4555 5555554 57888887 7663
No 476
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=74.73 E-value=5.9 Score=38.87 Aligned_cols=98 Identities=19% Similarity=0.144 Sum_probs=61.4
Q ss_pred cccc--cCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhC-------CCCEEEccCCCHHHHHhcCccccCEEEEec
Q 001096 1011 HIIL--CGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRAL-------DLPVYFGDAGSREVLHKVGAERACAAAITL 1081 (1158)
Q Consensus 1011 hvVI--iG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~-------g~~vi~GDasd~e~L~~AgI~~A~~VIi~t 1081 (1158)
+++= ||.|.++..+++ .+..|+.+|.+++.++.+++. ++.++.+|..+ .+.. ...|.|++..
T Consensus 38 ~vLdiG~G~G~~~~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~--~~~~---~~~D~i~~~~ 108 (183)
T 2yxd_A 38 VVVDVGCGSGGMTVEIAK----RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED--VLDK---LEFNKAFIGG 108 (183)
T ss_dssp EEEEESCCCSHHHHHHHT----TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH--HGGG---CCCSEEEECS
T ss_pred EEEEeCCCCCHHHHHHHh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc--cccC---CCCcEEEECC
Confidence 4444 455555555544 678999999999988766432 46788888765 2332 4688877665
Q ss_pred CCchhhHHHHHHHHhhCCCceEEEEecChh----hHHHHHHCC
Q 001096 1082 DTPGANYRTVWALSKYFPNVKTFVRAHDID----HGLNLEKAG 1120 (1158)
Q Consensus 1082 ~dd~~Nl~i~l~ar~l~p~~~IIara~d~e----~~~~L~~aG 1120 (1158)
..+ -..+...+++. |+-.++....+.+ ..+.+++.|
T Consensus 109 ~~~--~~~~l~~~~~~-~gG~l~~~~~~~~~~~~~~~~l~~~g 148 (183)
T 2yxd_A 109 TKN--IEKIIEILDKK-KINHIVANTIVLENAAKIINEFESRG 148 (183)
T ss_dssp CSC--HHHHHHHHHHT-TCCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred ccc--HHHHHHHHhhC-CCCEEEEEecccccHHHHHHHHHHcC
Confidence 522 22344455556 8878777776544 345556666
No 477
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=74.69 E-value=17 Score=33.50 Aligned_cols=100 Identities=12% Similarity=0.058 Sum_probs=61.3
Q ss_pred CCEEEEeCCchHHHH----hhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEEe
Q 001096 1033 IPFVALDVRSDRVAI----GRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRA 1107 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~----l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIara 1107 (1158)
..+.++|.|+...+. +...|+.+...+ +..+.+..+.-...+.+++-..-+. .-+.++..+|+..|.++||+.+
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s 82 (136)
T 1mvo_A 4 KKILVVDDEESIVTLLQYNLERSGYDVITAS-DGEEALKKAETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLT 82 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCcEEEEec-CHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEE
Confidence 356777776654432 234566554321 2234444443345788877765543 3466788888888888888776
Q ss_pred cCh--hhHHHHHHCCCCeeecCCcHHHH
Q 001096 1108 HDI--DHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1108 ~d~--e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
... .......++|++.++........
T Consensus 83 ~~~~~~~~~~~~~~g~~~~l~KP~~~~~ 110 (136)
T 1mvo_A 83 AKDEEFDKVLGLELGADDYMTKPFSPRE 110 (136)
T ss_dssp CTTCCCCHHHHHHTTCCEEEESSCCHHH
T ss_pred CCCCHHHHHHHHhCCCCEEEECCCCHHH
Confidence 644 34666778999988776655444
No 478
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=74.67 E-value=4 Score=45.60 Aligned_cols=108 Identities=19% Similarity=0.094 Sum_probs=70.0
Q ss_pred cccccCCcccHHHHHHHHhhCC--CCEEEEeCCchHHHH-h---hhC-----CCCEEEccCCCHHHHHhcCccccCEEEE
Q 001096 1011 HIILCGFGRVGQIIAQLLSERL--IPFVALDVRSDRVAI-G---RAL-----DLPVYFGDAGSREVLHKVGAERACAAAI 1079 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g--~~VvVID~d~~~v~~-l---~~~-----g~~vi~GDasd~e~L~~AgI~~A~~VIi 1079 (1158)
.+.|+|.|.+|..++-.|...+ .+++++|.|+++.+. . .+. ...+. ++ + ...+++||.||+
T Consensus 2 KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~-----~~a~~~aD~Vii 73 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--S-----YGDLEGARAVVL 73 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--C-----GGGGTTEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--C-----HHHhCCCCEEEE
Confidence 4789999999999999998776 589999999887653 2 221 22333 32 2 223779999999
Q ss_pred ecCCch-----------hhHH----HHHHHHhhCCCceEEEEecChhh--HHHH-HHCCCC--eeecC
Q 001096 1080 TLDTPG-----------ANYR----TVWALSKYFPNVKTFVRAHDIDH--GLNL-EKAGAT--AVVPE 1127 (1158)
Q Consensus 1080 ~t~dd~-----------~Nl~----i~l~ar~l~p~~~IIara~d~e~--~~~L-~~aGAd--~VI~p 1127 (1158)
+.+-+. .|.. ++..+++.+|+..+++. .|+-+ ...+ +..|.+ +||--
T Consensus 74 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~-tNPv~~~t~~~~k~s~~p~~rviG~ 140 (310)
T 2xxj_A 74 AAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA-TNPVDVMTQVAYALSGLPPGRVVGS 140 (310)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC-SSSHHHHHHHHHHHHTCCGGGEEEC
T ss_pred CCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe-cCchHHHHHHHHHHcCCCHHHEEec
Confidence 886652 3333 45567778999888885 55532 3333 333443 55544
No 479
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=74.67 E-value=11 Score=44.81 Aligned_cols=90 Identities=11% Similarity=0.055 Sum_probs=59.6
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhh-----------CCCC-----------EEEccCCCHHHHH
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRA-----------LDLP-----------VYFGDAGSREVLH 1067 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~-----------~g~~-----------vi~GDasd~e~L~ 1067 (1158)
.++.|+|.|.+|..++..|.+.|++|+++|.+++..+.+.+ .|.- +... ++ ++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~--~~---~~ 80 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV--TD---IH 80 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE--CC---GG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe--CC---HH
Confidence 46888999999999999999999999999999999877643 3320 1111 11 12
Q ss_pred hcCccccCEEEEecCCchhhH-HHHHHHHhhCCCceEEEE
Q 001096 1068 KVGAERACAAAITLDTPGANY-RTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1068 ~AgI~~A~~VIi~t~dd~~Nl-~i~l~ar~l~p~~~IIar 1106 (1158)
.+.+||.||.++.++..-. .+...+....+.-.|++.
T Consensus 81 --~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~Ilas 118 (483)
T 3mog_A 81 --ALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTT 118 (483)
T ss_dssp --GGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEe
Confidence 3678999999998874321 222234444333345543
No 480
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=74.63 E-value=9.7 Score=43.22 Aligned_cols=85 Identities=15% Similarity=0.081 Sum_probs=56.7
Q ss_pred cccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchh--
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGA-- 1086 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~-- 1086 (1158)
...+.|+|+|.+|+.+++.|+..|.+|++.|++++. ..+.+... .+.+.+ +.++|.|++.++....
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~~~~~~~-----~~l~el----l~~aDvV~l~~Plt~~t~ 215 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP---EFEPFLTY-----TDFDTV----LKEADIVSLHTPLFPSTE 215 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG---GGTTTCEE-----CCHHHH----HHHCSEEEECCCCCTTTT
T ss_pred CCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh---hhhccccc-----cCHHHH----HhcCCEEEEcCCCCHHHH
Confidence 346889999999999999999999999999998764 11222221 143333 3479999999986432
Q ss_pred hHHHHHHHHhhCCCceEEE
Q 001096 1087 NYRTVWALSKYFPNVKTFV 1105 (1158)
Q Consensus 1087 Nl~i~l~ar~l~p~~~IIa 1105 (1158)
++.-...+....|...+|-
T Consensus 216 ~li~~~~l~~mk~gailIN 234 (343)
T 2yq5_A 216 NMIGEKQLKEMKKSAYLIN 234 (343)
T ss_dssp TCBCHHHHHHSCTTCEEEE
T ss_pred HHhhHHHHhhCCCCcEEEE
Confidence 2222344555666644443
No 481
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=74.53 E-value=2.4 Score=48.22 Aligned_cols=67 Identities=12% Similarity=-0.010 Sum_probs=49.2
Q ss_pred cccccCCcccHHHHHHHHhhCC-------CCEEEEeCCch-----HHHHhhhCCC------------CEEEccCCCH-HH
Q 001096 1011 HIILCGFGRVGQIIAQLLSERL-------IPFVALDVRSD-----RVAIGRALDL------------PVYFGDAGSR-EV 1065 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e~g-------~~VvVID~d~~-----~v~~l~~~g~------------~vi~GDasd~-e~ 1065 (1158)
.+.|+|.|.+|..++..|.+.| ++|+++|++++ +.+.+.+.+. .+..- +++ +.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~--~~~~ea 100 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAH--SDLASV 100 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEE--SSTHHH
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEE--CCHHHH
Confidence 5899999999999999999988 99999999988 7776654321 11111 111 11
Q ss_pred HHhcCccccCEEEEecCCc
Q 001096 1066 LHKVGAERACAAAITLDTP 1084 (1158)
Q Consensus 1066 L~~AgI~~A~~VIi~t~dd 1084 (1158)
++++|.||+++.+.
T Consensus 101 -----~~~aDvVilav~~~ 114 (375)
T 1yj8_A 101 -----INDADLLIFIVPCQ 114 (375)
T ss_dssp -----HTTCSEEEECCCHH
T ss_pred -----HcCCCEEEEcCCHH
Confidence 34789999999864
No 482
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=74.50 E-value=9.6 Score=42.74 Aligned_cols=92 Identities=11% Similarity=0.209 Sum_probs=64.9
Q ss_pred cccccccCCcccHHHHHHHHhhCCC-CEEEEeCCchHHHHhhhCCCCEEEccCC--C-HHH---H-HhcCccccCEEEEe
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRALDLPVYFGDAG--S-REV---L-HKVGAERACAAAIT 1080 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~~~v~~l~~~g~~vi~GDas--d-~e~---L-~~AgI~~A~~VIi~ 1080 (1158)
.+.++|.|.|.+|...++.++..|. +|+++|.++++.+.+++.|...++ |.. + .+. + +..+ ..+|+++-+
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~~~i~~~~~-~g~D~vid~ 249 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVL-QISKESPQEIARKVEGQLG-CKPEVTIEC 249 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEE-ECSSCCHHHHHHHHHHHHT-SCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE-cCcccccchHHHHHHHHhC-CCCCEEEEC
Confidence 3468999999999999999999999 899999999999989988876443 333 2 222 2 2234 678999888
Q ss_pred cCCchhhHHHHHHHHhhCCCceEEE
Q 001096 1081 LDTPGANYRTVWALSKYFPNVKTFV 1105 (1158)
Q Consensus 1081 t~dd~~Nl~i~l~ar~l~p~~~IIa 1105 (1158)
++.+.. +...++.+.|.-+++.
T Consensus 250 ~g~~~~---~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 250 TGAEAS---IQAGIYATRSGGTLVL 271 (356)
T ss_dssp SCCHHH---HHHHHHHSCTTCEEEE
T ss_pred CCChHH---HHHHHHHhcCCCEEEE
Confidence 876522 2333445555555544
No 483
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=74.49 E-value=2.6 Score=44.68 Aligned_cols=75 Identities=21% Similarity=0.112 Sum_probs=51.4
Q ss_pred ccccccccCC-cccHHHHHHHHhhCCCCEEEEe-CCchHHH----HhhhC--CCCEEEccCCCHHHHHhcC------ccc
Q 001096 1008 LQDHIILCGF-GRVGQIIAQLLSERLIPFVALD-VRSDRVA----IGRAL--DLPVYFGDAGSREVLHKVG------AER 1073 (1158)
Q Consensus 1008 l~~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID-~d~~~v~----~l~~~--g~~vi~GDasd~e~L~~Ag------I~~ 1073 (1158)
..+.++|.|. +-+|+.+++.|.++|..|++++ .+.+... ..... .+.++.+|.+|++.++++= ..+
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 91 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGE 91 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 3566777775 5699999999999999999988 5544332 22333 4677889999988765431 125
Q ss_pred cCEEEEecC
Q 001096 1074 ACAAAITLD 1082 (1158)
Q Consensus 1074 A~~VIi~t~ 1082 (1158)
.|++|-..+
T Consensus 92 id~lv~~Ag 100 (256)
T 3ezl_A 92 IDVLVNNAG 100 (256)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCC
Confidence 677766543
No 484
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=74.48 E-value=3.4 Score=45.38 Aligned_cols=72 Identities=11% Similarity=0.084 Sum_probs=51.6
Q ss_pred cccccCC-cccHHHHHHHHhhCCCCEEEEeCCc----hHHHHhh---hCCCCEEEccCCCHHHHHhcCc-cccCEEEEec
Q 001096 1011 HIILCGF-GRVGQIIAQLLSERLIPFVALDVRS----DRVAIGR---ALDLPVYFGDAGSREVLHKVGA-ERACAAAITL 1081 (1158)
Q Consensus 1011 hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~----~~v~~l~---~~g~~vi~GDasd~e~L~~AgI-~~A~~VIi~t 1081 (1158)
.++|.|. |-+|..+++.|.+.|++|++++.+. +..+.+. ..++.++.||.+|++.++++=- .+.|+||-+.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~A 81 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEECC
Confidence 3677764 8899999999999999999998532 2233222 2357789999999988865421 1478887655
Q ss_pred C
Q 001096 1082 D 1082 (1158)
Q Consensus 1082 ~ 1082 (1158)
.
T Consensus 82 ~ 82 (338)
T 1udb_A 82 G 82 (338)
T ss_dssp S
T ss_pred c
Confidence 3
No 485
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=74.37 E-value=1.9 Score=46.83 Aligned_cols=73 Identities=15% Similarity=0.051 Sum_probs=53.6
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHh----hhC--CCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l----~~~--g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.|. +-+|+.+++.|.+.|..|++++++++..+.. ++. ...++.+|.+|++.++++= ..+.|+
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDI 106 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 35677775 5699999999999999999999998876544 233 3556779999998876541 125777
Q ss_pred EEEecC
Q 001096 1077 AAITLD 1082 (1158)
Q Consensus 1077 VIi~t~ 1082 (1158)
+|-..+
T Consensus 107 lv~nAg 112 (271)
T 4ibo_A 107 LVNNAG 112 (271)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 776543
No 486
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=74.36 E-value=9.4 Score=42.62 Aligned_cols=109 Identities=18% Similarity=0.167 Sum_probs=70.5
Q ss_pred ccccccCCcccHHHHHHHHhhCCC--CEEEEeCCchHHHHh----hh------CCCCEEEccCCCHHHHHhcCccccCEE
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLI--PFVALDVRSDRVAIG----RA------LDLPVYFGDAGSREVLHKVGAERACAA 1077 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~--~VvVID~d~~~v~~l----~~------~g~~vi~GDasd~e~L~~AgI~~A~~V 1077 (1158)
..+.|+|.|.+|..++-.|...+. +++++|.|+++.+.. .+ .... +.+| + ...+++||.|
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-v~~~--~-----~~a~~~aDvV 78 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVR-VKAG--E-----YSDCHDADLV 78 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCE-EEEC--C-----GGGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeE-EEeC--C-----HHHhCCCCEE
Confidence 468999999999999999988774 899999998766421 11 1222 3332 1 2237799999
Q ss_pred EEecCCc-----------hhhHH----HHHHHHhhCCCceEEEEecChhh--HHHHHH-CCCC--eeecC
Q 001096 1078 AITLDTP-----------GANYR----TVWALSKYFPNVKTFVRAHDIDH--GLNLEK-AGAT--AVVPE 1127 (1158)
Q Consensus 1078 Ii~t~dd-----------~~Nl~----i~l~ar~l~p~~~IIara~d~e~--~~~L~~-aGAd--~VI~p 1127 (1158)
|++.+-+ ..|.. ++..+++..|+..+++ ..|+-+ ...+.+ .|.+ +||--
T Consensus 79 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~tNPv~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 79 VICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLV-ATNPVDILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE-CSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE-ecCcHHHHHHHHHHHhCCCHHHEEec
Confidence 9998654 23332 4456677799988888 455542 333433 3443 55543
No 487
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=74.34 E-value=1.9 Score=48.14 Aligned_cols=71 Identities=15% Similarity=0.180 Sum_probs=48.7
Q ss_pred cccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHH--HHhh---------hCCCCEEEccCCCHHHHHhcCcc-ccCEE
Q 001096 1011 HIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRV--AIGR---------ALDLPVYFGDAGSREVLHKVGAE-RACAA 1077 (1158)
Q Consensus 1011 hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v--~~l~---------~~g~~vi~GDasd~e~L~~AgI~-~A~~V 1077 (1158)
+++|.| .|-+|..+++.|.+.|++|++++++++.. +.+. ..++.++.||.+|++.+.++=-+ +.|+|
T Consensus 3 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (372)
T 1db3_A 3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEV 82 (372)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCCEE
Confidence 477887 58999999999999999999999886542 1121 13567788999999887765211 36787
Q ss_pred EEec
Q 001096 1078 AITL 1081 (1158)
Q Consensus 1078 Ii~t 1081 (1158)
|-+.
T Consensus 83 ih~A 86 (372)
T 1db3_A 83 YNLG 86 (372)
T ss_dssp EECC
T ss_pred EECC
Confidence 7654
No 488
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=74.33 E-value=4.5 Score=44.76 Aligned_cols=124 Identities=11% Similarity=0.022 Sum_probs=73.4
Q ss_pred cccccCCcccHHHH-HHHHhhCCCCEE-EEeCCchHHHHhh-hCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhh
Q 001096 1011 HIILCGFGRVGQII-AQLLSERLIPFV-ALDVRSDRVAIGR-ALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGAN 1087 (1158)
Q Consensus 1011 hvVIiG~G~vG~~I-a~~L~e~g~~Vv-VID~d~~~v~~l~-~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~N 1087 (1158)
++.|+|.|.+|+.. ++.|.+.+.+++ +.|.++++.+.+. +.|.+..+ .|.+.+-+ -.++|+|+++++++..
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~---~~~~~~l~--~~~~D~V~i~tp~~~h- 75 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV---TSVEELVG--DPDVDAVYVSTTNELH- 75 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB---SCHHHHHT--CTTCCEEEECSCGGGH-
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc---CCHHHHhc--CCCCCEEEEeCChhHh-
Confidence 36789999999998 888877777766 7799998886653 44553222 33333322 1368999999997743
Q ss_pred HHHHHHHHhhCCCceEEEE---ecChhhHHHH----HHCCCCeeecCC--cHHHHHHHHHHHHh
Q 001096 1088 YRTVWALSKYFPNVKTFVR---AHDIDHGLNL----EKAGATAVVPET--LEPSLQLAAAVLAQ 1142 (1158)
Q Consensus 1088 l~i~l~ar~l~p~~~IIar---a~d~e~~~~L----~~aGAd~VI~p~--~~a~~~LA~~vl~~ 1142 (1158)
...+..+-+. ...|++. +.+.+....+ ++.|+...+... ..++..-++..+..
T Consensus 76 ~~~~~~al~~--Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~ 137 (332)
T 2glx_A 76 REQTLAAIRA--GKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAE 137 (332)
T ss_dssp HHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHT
T ss_pred HHHHHHHHHC--CCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHc
Confidence 3333333333 3456653 2344443333 456776655432 33445555555543
No 489
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=74.33 E-value=4 Score=46.85 Aligned_cols=87 Identities=15% Similarity=0.094 Sum_probs=58.0
Q ss_pred ccccccCCcccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCchhhH-
Q 001096 1010 DHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANY- 1088 (1158)
Q Consensus 1010 ~hvVIiG~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~~Nl- 1088 (1158)
..+-|+|+|.+|+.+++.++..|.+|++.|++.. .+...+.|+.. .+.+.+ +.++|.|++.++....+.
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~~g~~~-----~~l~el----l~~aDvV~l~~Plt~~T~~ 246 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLP-RSMLEENGVEP-----ASLEDV----LTKSDFIFVVAAVTSENKR 246 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSC-HHHHHHTTCEE-----CCHHHH----HHSCSEEEECSCSSCC---
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCCC-HHHHhhcCeee-----CCHHHH----HhcCCEEEEcCcCCHHHHh
Confidence 4689999999999999999999999999998853 33445556542 233333 347899999887653332
Q ss_pred -HHHHHHHhhCCCceEEEE
Q 001096 1089 -RTVWALSKYFPNVKTFVR 1106 (1158)
Q Consensus 1089 -~i~l~ar~l~p~~~IIar 1106 (1158)
.-...+....|...+|-.
T Consensus 247 li~~~~l~~mk~gailIN~ 265 (365)
T 4hy3_A 247 FLGAEAFSSMRRGAAFILL 265 (365)
T ss_dssp CCCHHHHHTSCTTCEEEEC
T ss_pred hcCHHHHhcCCCCcEEEEC
Confidence 223445555666444433
No 490
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=74.32 E-value=4.7 Score=46.15 Aligned_cols=71 Identities=18% Similarity=0.198 Sum_probs=50.0
Q ss_pred cccccCCcccHHHHHHHHhh-CCCCEEEEe---CCchHHHH-hhhCCCCEE--E--c-------cC----CCHHHHHhcC
Q 001096 1011 HIILCGFGRVGQIIAQLLSE-RLIPFVALD---VRSDRVAI-GRALDLPVY--F--G-------DA----GSREVLHKVG 1070 (1158)
Q Consensus 1011 hvVIiG~G~vG~~Ia~~L~e-~g~~VvVID---~d~~~v~~-l~~~g~~vi--~--G-------Da----sd~e~L~~Ag 1070 (1158)
++.|+|.|.+|..++..|.+ .|++|+++| .++++++. .++.|..+- . | .. ++.+. .
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--a-- 79 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEI--A-- 79 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHH--H--
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHH--H--
Confidence 57899999999999999987 599999999 88888877 344442110 1 1 11 12221 1
Q ss_pred ccccCEEEEecCCch
Q 001096 1071 AERACAAAITLDTPG 1085 (1158)
Q Consensus 1071 I~~A~~VIi~t~dd~ 1085 (1158)
+..+|+||+++....
T Consensus 80 ~~~aD~Vilav~~~~ 94 (404)
T 3c7a_A 80 ISGADVVILTVPAFA 94 (404)
T ss_dssp HTTCSEEEECSCGGG
T ss_pred hCCCCEEEEeCchHH
Confidence 347999999998875
No 491
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=74.30 E-value=3 Score=44.65 Aligned_cols=72 Identities=15% Similarity=0.055 Sum_probs=52.1
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEE-eCCchHHHHh----hhC--CCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVAL-DVRSDRVAIG----RAL--DLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVI-D~d~~~v~~l----~~~--g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.|. +-+|+.+++.|.++|..|+++ +++++..+.. ++. ...++.+|.+|++.++++= ..+.|
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLD 84 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 45777775 569999999999999999997 7777665443 222 4567789999998776531 12567
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
.+|-..
T Consensus 85 ~lv~nA 90 (258)
T 3oid_A 85 VFVNNA 90 (258)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 777654
No 492
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=74.29 E-value=9.8 Score=43.07 Aligned_cols=94 Identities=13% Similarity=0.181 Sum_probs=67.5
Q ss_pred cccccccCCcccHHHHHHHHhhCCC-CEEEEeCCchHHHHhhhCCCCEEEc----cCCCHHHHHhcCccccCEEEEecCC
Q 001096 1009 QDHIILCGFGRVGQIIAQLLSERLI-PFVALDVRSDRVAIGRALDLPVYFG----DAGSREVLHKVGAERACAAAITLDT 1083 (1158)
Q Consensus 1009 ~~hvVIiG~G~vG~~Ia~~L~e~g~-~VvVID~d~~~v~~l~~~g~~vi~G----Dasd~e~L~~AgI~~A~~VIi~t~d 1083 (1158)
...++|.|.|.+|...++.++..|. .|+++|.++++.+.+++.|...+.- +..-.+.++++.-..+|+++-+++.
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~ 273 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGN 273 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCC
Confidence 4568999999999999999999998 8999999999999999998765442 1222445555533479999988887
Q ss_pred chhhHHHHHHHHhhCCC-ceEEE
Q 001096 1084 PGANYRTVWALSKYFPN-VKTFV 1105 (1158)
Q Consensus 1084 d~~Nl~i~l~ar~l~p~-~~IIa 1105 (1158)
+.. +...++.+.+. -+++.
T Consensus 274 ~~~---~~~~~~~l~~g~G~iv~ 293 (378)
T 3uko_A 274 VSV---MRAALECCHKGWGTSVI 293 (378)
T ss_dssp HHH---HHHHHHTBCTTTCEEEE
T ss_pred HHH---HHHHHHHhhccCCEEEE
Confidence 532 33344555553 45544
No 493
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=74.23 E-value=2.5 Score=44.06 Aligned_cols=66 Identities=24% Similarity=0.235 Sum_probs=50.0
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhhhCCCCEEEccCCCHHHHHhcCc-----cccCEEEEec
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGA-----ERACAAAITL 1081 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~~~g~~vi~GDasd~e~L~~AgI-----~~A~~VIi~t 1081 (1158)
+.++|.|. |.+|+.+++.|.++|++|++++++++ .....++.+|.+|++.++++=- .+.|.+|-..
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~a 74 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------GEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAA 74 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc------ccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcc
Confidence 35677764 67999999999999999999999876 1345788999999988766411 1456666543
No 494
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=74.21 E-value=2.3 Score=45.78 Aligned_cols=72 Identities=7% Similarity=-0.020 Sum_probs=52.8
Q ss_pred ccccccC-CcccHHHHHHHHhhCCCCEEEEeCCchHHHHhh------hCCCCEEEccCCCHHHHHhcC------ccccCE
Q 001096 1010 DHIILCG-FGRVGQIIAQLLSERLIPFVALDVRSDRVAIGR------ALDLPVYFGDAGSREVLHKVG------AERACA 1076 (1158)
Q Consensus 1010 ~hvVIiG-~G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~------~~g~~vi~GDasd~e~L~~Ag------I~~A~~ 1076 (1158)
+.++|.| .|.+|+.+++.|.++|++|++++++++..+... ...+.++.+|.+|++.++++= ..+.|+
T Consensus 35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 114 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDV 114 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 4577776 567999999999999999999999876544332 124667889999998876541 124788
Q ss_pred EEEec
Q 001096 1077 AAITL 1081 (1158)
Q Consensus 1077 VIi~t 1081 (1158)
||-..
T Consensus 115 li~~A 119 (279)
T 3ctm_A 115 FVANA 119 (279)
T ss_dssp EEECG
T ss_pred EEECC
Confidence 77654
No 495
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=74.20 E-value=4.3 Score=43.93 Aligned_cols=71 Identities=15% Similarity=0.034 Sum_probs=51.6
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHH---HhhhCC--CCEEEccCCCHHHHHhcCcc------ccCEE
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVA---IGRALD--LPVYFGDAGSREVLHKVGAE------RACAA 1077 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~---~l~~~g--~~vi~GDasd~e~L~~AgI~------~A~~V 1077 (1158)
+.++|.|. +-+|+.+++.|.+.|..|+++++++...+ .+.+.+ ..++.+|.+|++..+++ .+ +.|.+
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~-~~~~~~~g~iD~l 110 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANV-AEELAATRRVDVL 110 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHH-HHHHHHHSCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH-HHHHHhcCCCcEE
Confidence 45677775 56999999999999999999996643322 223333 56778999999988776 33 57887
Q ss_pred EEec
Q 001096 1078 AITL 1081 (1158)
Q Consensus 1078 Ii~t 1081 (1158)
|-..
T Consensus 111 v~nA 114 (273)
T 3uf0_A 111 VNNA 114 (273)
T ss_dssp EECC
T ss_pred EECC
Confidence 7654
No 496
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=74.18 E-value=6.9 Score=40.40 Aligned_cols=102 Identities=10% Similarity=-0.004 Sum_probs=68.6
Q ss_pred CCEEEEeCCchHHHHh----h-hCCCCEEEccCCCHHHHHh-cCccccCEEEEecCCchhh-HHHHHHHHh-hCCCceEE
Q 001096 1033 IPFVALDVRSDRVAIG----R-ALDLPVYFGDAGSREVLHK-VGAERACAAAITLDTPGAN-YRTVWALSK-YFPNVKTF 1104 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~-~~g~~vi~GDasd~e~L~~-AgI~~A~~VIi~t~dd~~N-l~i~l~ar~-l~p~~~II 1104 (1158)
..|.+||.|+...+.+ . ..|+.++.-...+.+.+.. +.-...|.+++-..-+..| +.++..+|+ .+|+++||
T Consensus 8 ~~IlivdD~~~~~~~l~~~L~~~~~~~v~~~~~~~~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii 87 (225)
T 3klo_A 8 LNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAKEV 87 (225)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHHSSEEEEEECGGGHHHHTTCSGGGGCCEEEEEGGGCCHHHHHHHHHHHHHHCTTCEEE
T ss_pred eEEEEEcCcHHHHHHHHHHHhhCCCceEEEEeCCcHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHhhCCCCcEE
Confidence 4688888887765433 2 2466665544455655654 4556788888877665444 567888888 79999988
Q ss_pred EEecChh--hHHHHHHCCCCeeecCCcHHHHH
Q 001096 1105 VRAHDID--HGLNLEKAGATAVVPETLEPSLQ 1134 (1158)
Q Consensus 1105 ara~d~e--~~~~L~~aGAd~VI~p~~~a~~~ 1134 (1158)
+.+...+ ......++||+..+.........
T Consensus 88 ~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L 119 (225)
T 3klo_A 88 IINCPQDIEHKLLFKWNNLAGVFYIDDDMDTL 119 (225)
T ss_dssp EEEECTTCCHHHHTTSTTEEEEEETTCCHHHH
T ss_pred EEECCcchhHHHHHHHhCCCEEEecCCCHHHH
Confidence 7776544 56666778998888776655543
No 497
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=74.18 E-value=12 Score=37.96 Aligned_cols=100 Identities=15% Similarity=0.118 Sum_probs=64.6
Q ss_pred CCEEEEeCCchHHHHh----hhCC-CCEEEccCCC-HHHHHhcCccccCEEEEecCCchh-hHHHHHHHHhhCCCceEEE
Q 001096 1033 IPFVALDVRSDRVAIG----RALD-LPVYFGDAGS-REVLHKVGAERACAAAITLDTPGA-NYRTVWALSKYFPNVKTFV 1105 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~~~g-~~vi~GDasd-~e~L~~AgI~~A~~VIi~t~dd~~-Nl~i~l~ar~l~p~~~IIa 1105 (1158)
..|.++|.|+...+.+ ...+ +.++ +.+.+ .+.++.+.-...|.+++-..-+.. -+.++..+|+.+|..+|++
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~~~~~vv-~~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ 84 (215)
T 1a04_A 6 ATILLIDDHPMLRTGVKQLISMAPDITVV-GEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVV 84 (215)
T ss_dssp EEEEEECSCHHHHHHHHHHHTTCTTEEEE-EEESSHHHHHHHHHHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCcEEE-EEeCCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEE
Confidence 4678888887655433 2232 4432 33333 444554444567888887765543 4678888999899888887
Q ss_pred EecC--hhhHHHHHHCCCCeeecCCcHHHH
Q 001096 1106 RAHD--IDHGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1106 ra~d--~e~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
.+.. .+......++|++.++........
T Consensus 85 ls~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~ 114 (215)
T 1a04_A 85 FSVSNHEEDVVTALKRGADGYLLKDMEPED 114 (215)
T ss_dssp EECCCCHHHHHHHHHTTCSEEEETTCCHHH
T ss_pred EECCCCHHHHHHHHHcCCcEEEeCCCCHHH
Confidence 7654 556677788999988876655544
No 498
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=74.07 E-value=2.9 Score=44.98 Aligned_cols=72 Identities=11% Similarity=0.059 Sum_probs=53.4
Q ss_pred ccccccCC-cccHHHHHHHHhhCCCCEEEEeCCchHHHHhh-------hCCCCEEEccCCCHHHHHhcC------ccccC
Q 001096 1010 DHIILCGF-GRVGQIIAQLLSERLIPFVALDVRSDRVAIGR-------ALDLPVYFGDAGSREVLHKVG------AERAC 1075 (1158)
Q Consensus 1010 ~hvVIiG~-G~vG~~Ia~~L~e~g~~VvVID~d~~~v~~l~-------~~g~~vi~GDasd~e~L~~Ag------I~~A~ 1075 (1158)
+.++|.|. +-+|+.+++.|.++|..|++++++++..+... ...+.++.+|.+|++.++++= ..+.|
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 100 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD 100 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 45777775 56999999999999999999999988765432 124667889999988765431 12577
Q ss_pred EEEEec
Q 001096 1076 AAAITL 1081 (1158)
Q Consensus 1076 ~VIi~t 1081 (1158)
++|-..
T Consensus 101 ~lv~nA 106 (266)
T 4egf_A 101 VLVNNA 106 (266)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 777654
No 499
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=73.87 E-value=10 Score=38.68 Aligned_cols=100 Identities=10% Similarity=0.038 Sum_probs=65.3
Q ss_pred CCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCccccCEEEEecCCch-hhHHHHHHHHhhCCCceEEEEe
Q 001096 1033 IPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPG-ANYRTVWALSKYFPNVKTFVRA 1107 (1158)
Q Consensus 1033 ~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI~~A~~VIi~t~dd~-~Nl~i~l~ar~l~p~~~IIara 1107 (1158)
..|.++|.|+...+.+ ...|+.+...+ +..+.+..+.-...|.+++-..-+. .-+.++..+|+.+|+++||+.+
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls 81 (225)
T 1kgs_A 3 VRVLVVEDERDLADLITEALKKEMFTVDVCY-DGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLT 81 (225)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTCEEEEES-SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEE
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCCCEEEEEC-CHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEe
Confidence 4678888877655433 44577665321 2244555544456788888776543 3466788899988999998888
Q ss_pred cChh--hHHHHHHCCCCeeecCCcHHHH
Q 001096 1108 HDID--HGLNLEKAGATAVVPETLEPSL 1133 (1158)
Q Consensus 1108 ~d~e--~~~~L~~aGAd~VI~p~~~a~~ 1133 (1158)
...+ ......++|++.++........
T Consensus 82 ~~~~~~~~~~~~~~ga~~~l~Kp~~~~~ 109 (225)
T 1kgs_A 82 ALSDVEYRVKGLNMGADDYLPKPFDLRE 109 (225)
T ss_dssp SSCHHHHHHHTCCCCCSEEEESSCCHHH
T ss_pred CCCCHHHHHHHHhCCccEEEeCCCCHHH
Confidence 7654 4445556899988876655554
No 500
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=73.87 E-value=21 Score=33.23 Aligned_cols=107 Identities=6% Similarity=-0.022 Sum_probs=0.0
Q ss_pred CCCCEEEEeCCchHHHHh----hhCCCCEEEccCCCHHHHHhcCc-----cccCEEEEecCCchhh-HHHHHHHHh-hCC
Q 001096 1031 RLIPFVALDVRSDRVAIG----RALDLPVYFGDAGSREVLHKVGA-----ERACAAAITLDTPGAN-YRTVWALSK-YFP 1099 (1158)
Q Consensus 1031 ~g~~VvVID~d~~~v~~l----~~~g~~vi~GDasd~e~L~~AgI-----~~A~~VIi~t~dd~~N-l~i~l~ar~-l~p 1099 (1158)
....|.++|.|+...+.+ ...|+..+.--.+-.+.++.+.- ...+.+++-..-+..| +.++..+|+ ..+
T Consensus 1 ~~~~ILivdD~~~~~~~l~~~L~~~g~~~v~~~~~~~~al~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~ 80 (133)
T 2r25_B 1 TSVKILVVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDLGY 80 (133)
T ss_dssp CCSCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHSCC
T ss_pred CCceEEEEcCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCChHHHHHHHHhhcCC
Q ss_pred CceEEEEecC--hhhHHHHHHCCCCeeecCCcHHHHHHHH
Q 001096 1100 NVKTFVRAHD--IDHGLNLEKAGATAVVPETLEPSLQLAA 1137 (1158)
Q Consensus 1100 ~~~IIara~d--~e~~~~L~~aGAd~VI~p~~~a~~~LA~ 1137 (1158)
..+||+.+.. .+......++|++..+............
T Consensus 81 ~~~ii~lt~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 120 (133)
T 2r25_B 81 TSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTI 120 (133)
T ss_dssp CSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHH
Done!