BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001098
         (1158 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359495006|ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vitis vinifera]
          Length = 1408

 Score = 1714 bits (4438), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 852/1272 (66%), Positives = 977/1272 (76%), Gaps = 118/1272 (9%)

Query: 1    MSVVHQLQSLVNQKCLKIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIA 60
            +SVV Q+ +LV  KC+KI ARV+RV     G ARA VLVD+YLPI  WSGWQFP+S + A
Sbjct: 139  ISVVRQIHALVVHKCVKIVARVVRV----CGEARAVVLVDVYLPIELWSGWQFPRSASTA 194

Query: 61   GSLFRHVSCDWEKRKSVLLDGGECFK--DGCDSSIWNISDCHVLDWK------------- 105
            G+LFRH+SCDWE+R SVL++  E +K  DG + S+WN+SDCHVL  K             
Sbjct: 195  GALFRHLSCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDCHVLGCKLHCNALDPSKKKL 254

Query: 106  ------------------PDSSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAA 147
                              PDSSRVKP D SC +GI +++DD++I+ILT L P+DLVR++A
Sbjct: 255  FELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWEVSDDVLINILTALAPMDLVRVSA 314

Query: 148  TCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVN 207
            TC HLR LAASIMPCMKLKLFPHQ AAVEWML RE NAE+L HPL+ID  TEDGF FY+N
Sbjct: 315  TCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRERNAEILPHPLFIDFLTEDGFAFYIN 374

Query: 208  TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHN 267
            TV+G+I TG  P +RDF GGMFCDEPGLGKTITALSLILKTQGT ADPPDGV++IWCTHN
Sbjct: 375  TVTGEIVTGMPPLIRDFRGGMFCDEPGLGKTITALSLILKTQGTWADPPDGVQVIWCTHN 434

Query: 268  GDPRCGYYDLSGDKLTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPLLKRARLVDP 327
             D RCGYY+L+ D ++ N M  GKR   Q ARR  LS+ K TPM++ K    +R RLV P
Sbjct: 435  SDQRCGYYELTSDNVSVNKMFSGKRILGQVARRGWLSLDKPTPMENRKYSSPERTRLVIP 494

Query: 328  GDEIEGFSSFSDVDMI-SPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICNDRNA 386
            G +I G +      +I SP    S PAT +VRCTR+L +VK+NL + Y+E S    +R  
Sbjct: 495  GVQIAGSTDSCPGKVIKSPTTVRSMPATRVVRCTRSLSRVKRNLVYAYEEASGFGKERKL 554

Query: 387  KGNSTAKKR-ANSSRQVPKRNQVGLSYVVSNSCERPEKVSTDHFACNETWVQCDACHKWR 445
            K NS+ +++ AN+ R +    +VG+S+ + + C+R EK S DH  CNETW+QCDACHKWR
Sbjct: 555  KKNSSERRQVANTPRHLSVDKRVGISHGLPHKCKRSEKDSEDHSECNETWIQCDACHKWR 614

Query: 446  KLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTSDGKKQNVS 505
            +L + SVADA AAWFCSMNSDP++QSC  PEE+WD+ Q ITYLPGF+AKGT  G++QNVS
Sbjct: 615  RLGEPSVADAAAAWFCSMNSDPSYQSCRVPEESWDDRQPITYLPGFYAKGTPGGEEQNVS 674

Query: 506  FFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSY-AAGETQGFHKI 564
            FF SVLKEHY  INS TKKAL WL KLSPD+LSEM+T GL  P+L ++  +G   GFHKI
Sbjct: 675  FFTSVLKEHYAFINSQTKKALIWLTKLSPDKLSEMDTVGLRRPVLDTHLVSGGDHGFHKI 734

Query: 565  FQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYL 624
            FQAFGL+RRVEKG +RWYYP+ L+NL FDL ALR+ALCEPLDS RLYLSRATL+VVPS L
Sbjct: 735  FQAFGLVRRVEKGTSRWYYPENLENLVFDLPALRIALCEPLDSFRLYLSRATLVVVPSNL 794

Query: 625  VDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMM 684
            VDHWKTQIQ+HV+PGQL ++VWTDHKKP AH+LAWDYDVVITTFNRLSAEW   K+S +M
Sbjct: 795  VDHWKTQIQKHVKPGQLRVYVWTDHKKPCAHNLAWDYDVVITTFNRLSAEWRPHKRSVLM 854

Query: 685  QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLK 744
            QVHWLRVMLDEGHTLGSSLNLTNKLQMA+SL ASNRWLLTGTPTPNTPNSQLSHLQPMLK
Sbjct: 855  QVHWLRVMLDEGHTLGSSLNLTNKLQMAVSLIASNRWLLTGTPTPNTPNSQLSHLQPMLK 914

Query: 745  FLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVT 804
            FLHEE YGQNQK+W+ GILRPFEAEMEEGRSRLL LLHRCMISARK DLQTIP CIK+VT
Sbjct: 915  FLHEEGYGQNQKSWEDGILRPFEAEMEEGRSRLLLLLHRCMISARKADLQTIPPCIKKVT 974

Query: 805  FLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVA 864
            FLNFTEEHA +YNELVVTVRRNILMADWNDPSHVESLLNPKQWKFR +TI+N+RLSCCVA
Sbjct: 975  FLNFTEEHAKSYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRISTIKNVRLSCCVA 1034

Query: 865  GHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL--------------R 910
            GHIKVTDAGEDIQETMD+LVENGLD +S EYAFIKYNLL GG C+              R
Sbjct: 1035 GHIKVTDAGEDIQETMDILVENGLDTISDEYAFIKYNLLYGGACMRCKEWCRLPVITPCR 1094

Query: 911  HILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ--W 968
            H+LCLDCVA+DSEKC+ PGCG LYEMQSPEILTRPENPNPKWPVP+DLIELQPSY+Q  W
Sbjct: 1095 HLLCLDCVALDSEKCTFPGCGNLYEMQSPEILTRPENPNPKWPVPKDLIELQPSYKQDTW 1154

Query: 969  ---------------------------------------------------SNTNTFLKQ 977
                                                               +N N  L+Q
Sbjct: 1155 DPDWQSTSSSKVTYIVKRLKALQEANRKSGYAMDEDSDIKDIDELVSLSEQNNCNALLQQ 1214

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF 1037
            D  R N E++   P+KV+IFSQFLEHIHVIEQQLTVAGIKF+GMYSPMHSSNK+KSL  F
Sbjct: 1215 DYTRLNDETSHISPEKVLIFSQFLEHIHVIEQQLTVAGIKFSGMYSPMHSSNKMKSLSTF 1274

Query: 1038 RHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
            +HDA C+ALLMDGSA+LGLDLSFVT VFLMEPIWDRSMEEQVISRAHRMGATRPI VETL
Sbjct: 1275 QHDADCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIRVETL 1334

Query: 1098 AMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFA-----------ESN 1146
            AMRGT+EEQMLEFLQD D CRR LKEE  KP  EG R+HR+LHDFA           ESN
Sbjct: 1335 AMRGTIEEQMLEFLQDADECRRFLKEEFGKPYSEGVRAHRSLHDFAESNYLAHHDLLESN 1394

Query: 1147 YLSHLSFVRTNS 1158
            YL+HLSFVRTNS
Sbjct: 1395 YLAHLSFVRTNS 1406


>gi|255544007|ref|XP_002513066.1| conserved hypothetical protein [Ricinus communis]
 gi|223548077|gb|EEF49569.1| conserved hypothetical protein [Ricinus communis]
          Length = 1322

 Score = 1613 bits (4176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 812/1260 (64%), Positives = 940/1260 (74%), Gaps = 145/1260 (11%)

Query: 1    MSVVHQLQSLVNQKCLKIEARVMRVEI----GENGAARAAV-LVDIYLPIAAWSGWQFPK 55
            +SVV+Q+ +LV  KC+KI ARV++VE       N  ARA V LVD+YLPI  W+GWQF K
Sbjct: 102  LSVVNQIHALVVNKCIKIIARVLKVEEDYSNSNNKDARAVVVLVDVYLPIELWTGWQFTK 161

Query: 56   SGAIAGSLFRHVSCDWEKRKSVLLDGGE-CFKDGCDSSIWNISDCHVLDWK-----PD-- 107
             G+ A +LFRH+S DW KR  +L+DGGE C  DG   SIWN+SDCHV+  +     PD  
Sbjct: 162  CGSTAAALFRHLSYDWGKRSLLLVDGGEYCKDDGGSMSIWNLSDCHVIGCQLHCSVPDST 221

Query: 108  ------------------------SSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLV 143
                                    SSRVKP+D++  +GI D+ DDI+I+IL+ LGP+DL+
Sbjct: 222  KKRRFELNEIFKGLPSVTNREKLYSSRVKPDDDTYESGIWDLTDDILINILSVLGPMDLI 281

Query: 144  RIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFY 203
            R+AATC+HLR LA S+MP MKLKLFPHQ+AAVEWML RE +  VL HPLY+  +TEDGF 
Sbjct: 282  RVAATCQHLRTLAVSVMPSMKLKLFPHQEAAVEWMLQRERSTHVLPHPLYMSFSTEDGFR 341

Query: 204  FYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIW 263
            FY+NTVSG++ T  AP++RDF GGMFCDEPGLGKTITALSL+LKTQGT+ADPPDGV+I W
Sbjct: 342  FYINTVSGEVVTEVAPSVRDFRGGMFCDEPGLGKTITALSLVLKTQGTIADPPDGVQITW 401

Query: 264  CTHNGDPRCGYYDLSGDKLTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPLLKRAR 323
            C +N D RCGYY+LSGD  +  +  LGKR   Q+ARR +L     TP+D       KRAR
Sbjct: 402  CVYNNDQRCGYYELSGDDFS--DTLLGKRAMWQSARRGKL----LTPVDGGSYSSPKRAR 455

Query: 324  LVDPGDEIEGFS-SFSDVDMISPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICN 382
            L D G+++  F+ S    +M S  V  SEP   +VRCTR+L ++KKNL H Y+ E    +
Sbjct: 456  LKDSGEQVVQFNESCPGKEMKSLSVPCSEPVKRVVRCTRSLSRIKKNLLHVYEGELGFGS 515

Query: 383  DRNAKGNSTAKKRANSSRQVPKRNQVGLSYVVSNSCERPEKVSTDHFACNETWVQCDACH 442
             +    NS  +K ++                                  NETWVQCDAC 
Sbjct: 516  KKKVGENSIKRKYSS--------------------------------VYNETWVQCDACR 543

Query: 443  KWRKLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTSDGKKQ 502
            KWR+L D  V DAT AWFCSMN+DP H+ C DPEEAWD+C+SITYLPGF  KGTS GK+Q
Sbjct: 544  KWRRLTDV-VPDATVAWFCSMNADPAHKRCKDPEEAWDSCESITYLPGFFPKGTSGGKEQ 602

Query: 503  NVSFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSYAAGETQGFH 562
            NVSFFISVLKEHY +INS TKKALTWLA LS ++LS+MET GL SP+LG+        F+
Sbjct: 603  NVSFFISVLKEHYSMINSKTKKALTWLATLSSEKLSQMETIGLTSPVLGTCGV---HVFN 659

Query: 563  KIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPS 622
            KIFQAFGL RRV+KG+TRW YP+TL+NLAFD+ ALR+ALC PL+SVRLYLSRATLIVVP+
Sbjct: 660  KIFQAFGLTRRVDKGVTRWCYPQTLENLAFDVDALRIALCNPLNSVRLYLSRATLIVVPA 719

Query: 623  YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSP 682
             LVDHWKTQIQ+H++P QL + +WTD+KKPSAHSLAWDYDVVITTFNRLSAEWG  KKSP
Sbjct: 720  NLVDHWKTQIQKHIKPDQLRVCIWTDYKKPSAHSLAWDYDVVITTFNRLSAEWGSSKKSP 779

Query: 683  MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPM 742
            +MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPM
Sbjct: 780  LMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPM 839

Query: 743  LKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKE 802
            LKFLHEE YGQNQK+W+ GILRPFEA+MEEGRSRLLQLLHRC+ISARK DL+TIP CIK+
Sbjct: 840  LKFLHEEVYGQNQKSWEAGILRPFEAKMEEGRSRLLQLLHRCLISARKRDLKTIPPCIKK 899

Query: 803  VTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
            VT LNFTEEHA +YNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS +IRN+RLSCC
Sbjct: 900  VTLLNFTEEHAKSYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSASIRNVRLSCC 959

Query: 863  VAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL------------- 909
            VAGHIKVTDAGEDIQETMD L E GLDP+S+EYA IKY L  GGNCL             
Sbjct: 960  VAGHIKVTDAGEDIQETMDDLAEKGLDPISEEYALIKYYLQYGGNCLRCQEWCRLPVVTP 1019

Query: 910  -RHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ- 967
             RH+LCLDCV +DSEKC+LPGCG+LYEMQ+P+ LTRPENPNPKWPVP+DLIELQPSY+Q 
Sbjct: 1020 CRHLLCLDCVGLDSEKCTLPGCGYLYEMQTPDSLTRPENPNPKWPVPKDLIELQPSYKQD 1079

Query: 968  -----WSNTNT---------------------------------------------FLKQ 977
                 W +T++                                              L Q
Sbjct: 1080 DWDPDWQSTSSSKVSYLVQRMKVLLEANSESGHYDKEADAKNIKEHLYPSQIGESNALLQ 1139

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF 1037
            D  R + ES K  P+KV+IFSQFLEHIHVIEQQLT AGIKFAG+YSPMHSSNK+KSL  F
Sbjct: 1140 DCSRQSSESYKKAPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGLYSPMHSSNKMKSLATF 1199

Query: 1038 RHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
            +HDA+CLALLMDGSA+LGLDLSFVT VFLMEPIWDRSMEEQVISRAHRMGATRP+ VETL
Sbjct: 1200 QHDATCLALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPVQVETL 1259

Query: 1098 AMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLSHLSFVRTN 1157
            AMRGT+EEQMLEFLQD D CR+LLKEE  KP+ EGAR  R+LHDFAE NYL+ LSFV  N
Sbjct: 1260 AMRGTIEEQMLEFLQDADECRKLLKEEFRKPDHEGARPRRSLHDFAERNYLARLSFVHKN 1319


>gi|224072879|ref|XP_002303924.1| chromatin remodeling complex subunit [Populus trichocarpa]
 gi|222841356|gb|EEE78903.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 1333

 Score = 1562 bits (4045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 811/1249 (64%), Positives = 943/1249 (75%), Gaps = 127/1249 (10%)

Query: 1    MSVVHQLQSLVNQKCLKIEARVMRVEIGENGAARAAVLVDI--YLPIAAWSGWQFPKSGA 58
            +SVVHQ+++LV  KC+KI ARV+ V   E       V+V +  YLP++ WSG QFPKSG 
Sbjct: 119  VSVVHQIRALVMHKCVKILARVLHVAESEGEVVEVRVVVLVDVYLPVSVWSGGQFPKSGP 178

Query: 59   IAGSLFRHVSCDWEKRKSVLLDGGECFKD--GCDSSIWNISDCHVLDWK-----PD---- 107
            IAGSLFRH+SCDWEKR+S+L+DGGE FK+  G   SIWN+S CHVL        PD    
Sbjct: 179  IAGSLFRHLSCDWEKRRSMLVDGGEYFKNALGDHRSIWNLSGCHVLGCNLHCDVPDSSSK 238

Query: 108  ----------------------SSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRI 145
                                  SSRVKP DNS  +GI D+  DI++SIL+ LGP DLVR+
Sbjct: 239  KRFELHEIFKGLPSTENKEQYYSSRVKPADNSLESGIWDLTGDILMSILSALGPKDLVRV 298

Query: 146  AATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFY 205
            AATC HLR LA SIMPCMKLKLFPHQQAAVEWML RE NA+VL HPLY +L+TEDGF F+
Sbjct: 299  AATCHHLRSLAVSIMPCMKLKLFPHQQAAVEWMLQRERNAQVLPHPLYTNLSTEDGFTFH 358

Query: 206  VNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCT 265
            V+TVSG+I TG APT+RDFHGGMFCDEPGLGKTITALSLILKT+GT+ADPPDGV+I WCT
Sbjct: 359  VSTVSGEIITGVAPTVRDFHGGMFCDEPGLGKTITALSLILKTRGTVADPPDGVQITWCT 418

Query: 266  HNGDPRCGYYDLSGDKLTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPLLKRARLV 325
            HNG+ RCGYY++ G   T NN  L KR  +Q+ARR QLS+ K T M+             
Sbjct: 419  HNGEQRCGYYEVDGRNFTPNNTPLAKRVMNQSARRGQLSLDKSTLMN------------- 465

Query: 326  DPGDEIEGFSSFSDVD-MISPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICNDR 384
            DPG +IEGFS+   V+ M S    SS+    +V+ +R    VK+NL H YDE     N +
Sbjct: 466  DPGQQIEGFSNSCPVNGMESSPAPSSDQTARVVQLSR----VKRNLLHEYDETPVFSNKK 521

Query: 385  NAKGNSTAKKRANSSRQVPKRNQVGLSYVVSNSCERPEKVSTDHFA-CNETWVQCDACHK 443
              K  S A    +  ++  +  ++ L               T HF   NETWVQCDAC K
Sbjct: 522  KRKHRSNAPIYVSEEQRHDRARRLNL--------------ITGHFRDFNETWVQCDACRK 567

Query: 444  WRKLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTSDGKKQN 503
            WRK L +SVAD  AAWFCSMN++P  QSC D EEAWD+  S+T++PGFH KGTS G++QN
Sbjct: 568  WRK-LTSSVADTDAAWFCSMNTNPERQSCRDAEEAWDDSCSLTHVPGFHTKGTSGGEEQN 626

Query: 504  VSFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASP---ILGSYAAGETQG 560
            VSFF SVLKEHY +INS TKKALTWLAKLSP+ LS MET GLASP          G++ G
Sbjct: 627  VSFFTSVLKEHYSMINSKTKKALTWLAKLSPERLSLMETIGLASPVVGTGSVSGGGDSHG 686

Query: 561  FHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVV 620
            FHKIF+AFGL+RRVEKG ++W YP+ L+NLAFDLAA R+A+C+PLDSVRLYLSRATL+VV
Sbjct: 687  FHKIFEAFGLVRRVEKGASKWCYPQKLENLAFDLAAFRIAICKPLDSVRLYLSRATLVVV 746

Query: 621  PSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKK 680
            P+ LVDHWKTQI++HV+PGQL L VWT+HKKPSAHSLAWDYDVVITTF+RLSAEWG RKK
Sbjct: 747  PANLVDHWKTQIEKHVKPGQLRLCVWTNHKKPSAHSLAWDYDVVITTFSRLSAEWGPRKK 806

Query: 681  SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
            SP+MQVH+LRVMLDEGHTLGSSL+LTNKLQMA+SL ASNRWLLTGTPTPNTPNSQLSHLQ
Sbjct: 807  SPLMQVHFLRVMLDEGHTLGSSLSLTNKLQMAMSLMASNRWLLTGTPTPNTPNSQLSHLQ 866

Query: 741  PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCI 800
            PMLKFL EEAYG NQK+W+ G+LRPFEAEMEEGR+RLL LLHRC+IS+RKTDL+TIP CI
Sbjct: 867  PMLKFLQEEAYGLNQKSWEAGVLRPFEAEMEEGRTRLLHLLHRCLISSRKTDLKTIPPCI 926

Query: 801  KEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLS 860
            K+VTFLNFT++HA +YNELVVTVRRNIL ADWNDPSHVESLLNPKQWKFRST IRN+RLS
Sbjct: 927  KKVTFLNFTKDHARSYNELVVTVRRNILTADWNDPSHVESLLNPKQWKFRSTLIRNVRLS 986

Query: 861  CCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL----------- 909
            CCVAGHIKV + GEDIQETMD+L+E GLDP+S+E+A IKY L  GGNCL           
Sbjct: 987  CCVAGHIKVAEVGEDIQETMDILIEKGLDPISEEHALIKYYLQYGGNCLRCKEWCRLPFI 1046

Query: 910  ---RHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYR 966
               RH+LCLDCVA++SEKC+ PGCG+ YEMQSPE+LTRPENPNPKWPVP+DLIELQPSY+
Sbjct: 1047 TPCRHLLCLDCVALNSEKCTFPGCGYSYEMQSPEVLTRPENPNPKWPVPKDLIELQPSYK 1106

Query: 967  Q--WSNTNT-----------------------------------FLKQDLYRPNLESNKA 989
            Q  W +T++                                    L+QD +      N+A
Sbjct: 1107 QANWQSTSSSKVAYLVQKLKALQEASRESSWSIDKDTQISVSSLVLQQDCF----SVNRA 1162

Query: 990  LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
              +KVIIFSQFLEHIHVIEQQL  AGIKFAGMYSPM   NK+KSL  F+HDA+C+ALLMD
Sbjct: 1163 AMEKVIIFSQFLEHIHVIEQQLAFAGIKFAGMYSPMPQINKMKSLATFQHDATCMALLMD 1222

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            GSA+LGLDLSFVT VFLMEPIWDRSMEEQVISRAHRMGATRPI+VETLAMRGT+EEQMLE
Sbjct: 1223 GSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLE 1282

Query: 1110 FLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLSHLSFVRTNS 1158
            FLQD D CRR+LKEE  K +  GAR HR+LHDFAES+YL+HLSFV T S
Sbjct: 1283 FLQDADGCRRVLKEESSKTDHAGARLHRSLHDFAESDYLAHLSFVHTGS 1331


>gi|449449272|ref|XP_004142389.1| PREDICTED: F-box protein At3g54460-like [Cucumis sativus]
          Length = 1366

 Score = 1503 bits (3892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 760/1251 (60%), Positives = 927/1251 (74%), Gaps = 117/1251 (9%)

Query: 1    MSVVHQLQSLVNQKCLKIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIA 60
            MSVV+Q+ +LV  KC+KI+A+V+ ++I E   ARA +LVD+YLP+  WSGWQFPKS  IA
Sbjct: 127  MSVVYQIHALVVHKCMKIDAQVIFLDIQE---ARAVLLVDVYLPVELWSGWQFPKSKTIA 183

Query: 61   GSLFRHVSCDWEKRKSVLLDGGECFKDG--CDSSIWNISDCHVLDW-------------- 104
             +LF+H+SC+W++R S+L+ G +  +D      S+ N+++CHV +               
Sbjct: 184  AALFKHLSCEWQERSSILV-GKDHSQDVHVVGKSVSNLAECHVHNCQLHNSSGGSPNRRL 242

Query: 105  -----------------KPDSSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAA 147
                             KP+ +R++PED+   +G+ DI+DDI+ +IL  L P+DLVR+A+
Sbjct: 243  FELHEIFRSLPSILKSSKPEYTRMQPEDDYSQSGLWDISDDILFNILKVLRPLDLVRVAS 302

Query: 148  TCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVN 207
            TCRHLR LAA IMPCMKLKL+PHQQAAVEWMLHRE +AE   HPLY   +TEDGF F+VN
Sbjct: 303  TCRHLRSLAALIMPCMKLKLYPHQQAAVEWMLHRERHAESFYHPLYAPFSTEDGFSFHVN 362

Query: 208  TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHN 267
            TV+G+I TG AP + DF GG+FCDEPGLGKTITALSLILKTQGTLA+PP G +I+WCTHN
Sbjct: 363  TVTGEIVTGGAPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGAQIVWCTHN 422

Query: 268  GDPRCGYYDLSGDKLTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPLLKRARLVDP 327
            G+ +CGYY++S    T  N  + K     N  +          ++DL     KRAR+   
Sbjct: 423  GNRKCGYYEVSSTSNTITNHFVLKEAVEWNPLKG---------LEDLTYHTPKRARMTTL 473

Query: 328  GDEIEGFSSFSDVDMISPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICNDRNAK 387
             D     +S +  ++ SP       A  +VRCTR+L  VK+NL   Y+  S++  + N  
Sbjct: 474  DDRHTTNNSCAGNELSSP-----SSAVDMVRCTRSLSSVKRNLLLAYEGASSLSKELNDG 528

Query: 388  GNSTAKKRANSSRQVP-KRNQVGLSYV-----VSNSCERPEKVSTDHFACNETWVQCDAC 441
              ST  +    +R+ P    +VG S        +N+ E     + D F   +TWVQCDAC
Sbjct: 529  KKSTRTR----TRKFPVGEKKVGASPASPSNGFTNNYEVLGTTNADKFEYKDTWVQCDAC 584

Query: 442  HKWRKLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTSDGKK 501
            HKWRKL + SVAD++AAWFCSM++DP +QSC  PEE++D C+ IT L GF++K TS G+K
Sbjct: 585  HKWRKLAETSVADSSAAWFCSMHTDPFYQSCSVPEESYDKCRPITNLLGFYSKETSGGEK 644

Query: 502  QNVSFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSY--AAGETQ 559
            +NVSFF SVLKE+  LINS TK+ LTWL+ L+P+++SEME TGL SPIL SY    G  +
Sbjct: 645  KNVSFFTSVLKENRALINSGTKRTLTWLSSLTPEKISEMERTGLRSPILTSYIIPGGNVR 704

Query: 560  GFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIV 619
            GFH+I  AFGL+R++EKG  RWYYP+ L NLAFD+AALR+AL EPLD VRLYLSRATLIV
Sbjct: 705  GFHQIIDAFGLVRKMEKGTMRWYYPQNLHNLAFDVAALRIALSEPLDLVRLYLSRATLIV 764

Query: 620  VPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRK 679
            VPS LVDHWKTQIQ+HVRPGQL ++VWTDH+KPSAH LAWDYDV+ITTF+RLSAEWG RK
Sbjct: 765  VPSNLVDHWKTQIQKHVRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPRK 824

Query: 680  KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHL 739
            +S +MQVHW RV+LDEGHTLGSSLNLTNKLQMAISL ++NRW+LTGTPTPNTPNSQLSHL
Sbjct: 825  RSILMQVHWSRVILDEGHTLGSSLNLTNKLQMAISLVSTNRWILTGTPTPNTPNSQLSHL 884

Query: 740  QPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLC 799
            QP+L+FLHEEAYGQN K+W+ GILRPFEAEMEEGR  LL LL RCMISARK DL TIP C
Sbjct: 885  QPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLNLLRRCMISARKIDLLTIPPC 944

Query: 800  IKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRL 859
            IK+V +LNFTEEHA +YNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS TI+N+RL
Sbjct: 945  IKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSATIKNIRL 1004

Query: 860  SCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNC----------- 908
            SCCVAGHIKV +AGEDIQETMD+LV++GLDP+SQEY+++KYNLL GG+C           
Sbjct: 1005 SCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSYLKYNLLYGGSCSRCGEWCRLPV 1064

Query: 909  ---LRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSY 965
                RH+LCLDCVA+DSE C+ PGCG LY MQ+PE L RPENPNPKWPVP+DLIELQPSY
Sbjct: 1065 IAPCRHLLCLDCVALDSEGCTFPGCGKLYVMQTPETLARPENPNPKWPVPKDLIELQPSY 1124

Query: 966  RQ------WSNTNT----FLKQDLYRPNLESNKA--LP---------------------- 991
            +Q      W +T++    +L + L   +  +N+A  LP                      
Sbjct: 1125 KQDNWDPDWQSTSSSKVAYLIERLKDLSETNNEAALLPPSSLTKSGALLQEVDHSRAITS 1184

Query: 992  ------DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
                  DKV+IFSQFLEHIHVIEQQLT+AGI+FAGMYSPMH+SNK+KSL MF+HDASC+ 
Sbjct: 1185 DHEIVRDKVLIFSQFLEHIHVIEQQLTIAGIRFAGMYSPMHASNKMKSLAMFQHDASCMV 1244

Query: 1046 LLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            LLMDGSA+LGLDLSFVT VFLMEPIWDRSMEEQVISRAHRMGA RPIHVETL M  T+EE
Sbjct: 1245 LLMDGSAALGLDLSFVTYVFLMEPIWDRSMEEQVISRAHRMGAIRPIHVETLVMHETIEE 1304

Query: 1106 QMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLSHLSFVRT 1156
            QM++FLQD D C+RL+KEE  KP+ EG R+HR+LHDFA SNYLS L FVRT
Sbjct: 1305 QMVQFLQDPDECKRLMKEEFGKPDYEGPRAHRSLHDFAGSNYLSQLKFVRT 1355


>gi|449487144|ref|XP_004157509.1| PREDICTED: F-box protein At3g54460-like [Cucumis sativus]
          Length = 1366

 Score = 1502 bits (3888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 759/1251 (60%), Positives = 927/1251 (74%), Gaps = 117/1251 (9%)

Query: 1    MSVVHQLQSLVNQKCLKIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIA 60
            MSVV+Q+ +LV  KC+KI+A+V+ ++I E   ARA +LVD+YLP+  WSGWQFPKS  +A
Sbjct: 127  MSVVYQIHALVVHKCMKIDAQVIFLDIQE---ARAVLLVDVYLPVELWSGWQFPKSKTVA 183

Query: 61   GSLFRHVSCDWEKRKSVLLDGGECFKDG--CDSSIWNISDCHVLDWK------------- 105
             +LF+H+SC+W++R S+L+ G +  +D      S+ N+++CHV + K             
Sbjct: 184  AALFKHLSCEWQERSSILV-GKDHSQDVHVVGKSVSNLAECHVHNCKLHNSSGGSPNRRL 242

Query: 106  ------------------PDSSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAA 147
                              P+ +R++PED+   +G+ DI+DDI+ +IL  L P+DLVR+A+
Sbjct: 243  FELHEIFRSLPSILKSSKPEYTRMQPEDDYSQSGLWDISDDILFNILKVLRPLDLVRVAS 302

Query: 148  TCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVN 207
            TCRHLR LAA IMPCMKLKL+PHQQAAVEWMLHRE +AE   HPLY   +TEDGF F+VN
Sbjct: 303  TCRHLRSLAALIMPCMKLKLYPHQQAAVEWMLHRERHAESFYHPLYAPFSTEDGFSFHVN 362

Query: 208  TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHN 267
            TV+G+I TG AP + DF GG+FCDEPGLGKTITALSLILKTQGTLA+PP G +I+WCTHN
Sbjct: 363  TVTGEIVTGGAPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGAQIVWCTHN 422

Query: 268  GDPRCGYYDLSGDKLTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPLLKRARLVDP 327
            G+ +CGYY++S    T  N  + K     N  +          ++DL     KRAR+   
Sbjct: 423  GNRKCGYYEVSSTSNTITNHFVLKEAVEWNPLKG---------LEDLTYHTPKRARMTTL 473

Query: 328  GDEIEGFSSFSDVDMISPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICNDRNAK 387
             D     +S +  ++ SP       A  +VRCTR+L  VK+NL   Y+  S++  + N  
Sbjct: 474  DDRHTTNNSCAGNELSSP-----SSAVDMVRCTRSLSSVKRNLLLAYEGASSLSKELNDG 528

Query: 388  GNSTAKKRANSSRQVP-KRNQVGLSYV-----VSNSCERPEKVSTDHFACNETWVQCDAC 441
              ST  +    +R+ P    +VG S        +N+ E     + D F   +TWVQCDAC
Sbjct: 529  KKSTRTR----TRKFPVGEKKVGSSPASPSNGFTNNYEVLGTTNADKFEYKDTWVQCDAC 584

Query: 442  HKWRKLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTSDGKK 501
            HKWRKL + SVAD++AAWFCSM++DP +QSC  PEE++D C+ IT L GF++K TS G+K
Sbjct: 585  HKWRKLAETSVADSSAAWFCSMHTDPFYQSCSVPEESYDKCRPITNLLGFYSKETSGGEK 644

Query: 502  QNVSFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSY--AAGETQ 559
            +NVSFF SVLKE+  LINS TK+ LTWL+ L+P+++SEME TGL SPIL SY    G  +
Sbjct: 645  KNVSFFTSVLKENRALINSGTKRTLTWLSSLTPEKISEMERTGLRSPILTSYIIPGGNVR 704

Query: 560  GFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIV 619
            GFH+I  AFGL+R++EKG  RWYYP+ L NLAFD+AALR+AL EPLD VRLYLSRATLIV
Sbjct: 705  GFHQIIDAFGLVRKMEKGTMRWYYPQNLHNLAFDVAALRIALSEPLDLVRLYLSRATLIV 764

Query: 620  VPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRK 679
            VPS LVDHWKTQIQ+HVRPGQL ++VWTDH+KPSAH LAWDYDV+ITTF+RLSAEWG RK
Sbjct: 765  VPSNLVDHWKTQIQKHVRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPRK 824

Query: 680  KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHL 739
            +S +MQVHW RV+LDEGHTLGSSLNLTNKLQMAISL ++NRW+LTGTPTPNTPNSQLSHL
Sbjct: 825  RSILMQVHWSRVILDEGHTLGSSLNLTNKLQMAISLVSTNRWILTGTPTPNTPNSQLSHL 884

Query: 740  QPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLC 799
            QP+L+FLHEEAYGQN K+W+ GILRPFEAEMEEGR  LL LL RCMISARK DL TIP C
Sbjct: 885  QPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLNLLRRCMISARKIDLLTIPPC 944

Query: 800  IKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRL 859
            IK+V +LNFTEEHA +YNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS TI+N+RL
Sbjct: 945  IKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSATIKNIRL 1004

Query: 860  SCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNC----------- 908
            SCCVAGHIKV +AGEDIQETMD+LV++GLDP+SQEY+++KYNLL GG+C           
Sbjct: 1005 SCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSYLKYNLLYGGSCSRCGEWCRLPV 1064

Query: 909  ---LRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSY 965
                RH+LCLDCVA+DSE C+ PGCG LY MQ+PE L RPENPNPKWPVP+DLIELQPSY
Sbjct: 1065 IAPCRHLLCLDCVALDSEGCTFPGCGKLYVMQTPETLARPENPNPKWPVPKDLIELQPSY 1124

Query: 966  RQ------WSNTNT----FLKQDLYRPNLESNKA--LP---------------------- 991
            +Q      W +T++    +L + L   +  +N+A  LP                      
Sbjct: 1125 KQDNWDPDWQSTSSSKVAYLIERLKDLSETNNEAALLPPSSLTKSGALLQEVDHSRAITS 1184

Query: 992  ------DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
                  DKV+IFSQFLEHIHVIEQQLT+AGI+FAGMYSPMH+SNK+KSL MF+HDASC+ 
Sbjct: 1185 DHEIVRDKVLIFSQFLEHIHVIEQQLTIAGIRFAGMYSPMHASNKMKSLAMFQHDASCMV 1244

Query: 1046 LLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            LLMDGSA+LGLDLSFVT VFLMEPIWDRSMEEQVISRAHRMGA RPIHVETL M  T+EE
Sbjct: 1245 LLMDGSAALGLDLSFVTYVFLMEPIWDRSMEEQVISRAHRMGAIRPIHVETLVMHETIEE 1304

Query: 1106 QMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLSHLSFVRT 1156
            QM++FLQD D C+RL+KEE  KP+ EG R+HR+LHDFA SNYLS L FVRT
Sbjct: 1305 QMVQFLQDPDECKRLMKEEFGKPDYEGPRAHRSLHDFAGSNYLSQLKFVRT 1355


>gi|356541572|ref|XP_003539248.1| PREDICTED: F-box protein At3g54460-like [Glycine max]
          Length = 1329

 Score = 1452 bits (3758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 743/1253 (59%), Positives = 913/1253 (72%), Gaps = 128/1253 (10%)

Query: 1    MSVVHQLQSLVNQKCLKIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIA 60
            +SVVHQL ++V +KC +I+ARV+ VE       R  VLVD+Y+P+  WSGWQFP+SG +A
Sbjct: 91   VSVVHQLHAMVTRKCARIDARVVCVE----ALPRVVVLVDVYVPVQVWSGWQFPRSGPVA 146

Query: 61   GSLFRHVSCDWEKRKSVLLDGGECFKD-GCDSSIWNISDCHVLDWKP------------- 106
            G++FRH+SCDW +R+S+L     C K  G + SIWN+SDCHVL  K              
Sbjct: 147  GAVFRHLSCDWNERRSMLSYPDYCRKTYGANESIWNLSDCHVLGCKLHSGVSNSSRKILF 206

Query: 107  ------------------DSSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAAT 148
                              +SS++ P DN C +GI +++DDI+  IL  LGP+DL R++AT
Sbjct: 207  QLHEIFKALPGVGKRQTFNSSKIIPMDNICRSGIWELSDDILTKILASLGPMDLTRVSAT 266

Query: 149  CRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNT 208
            C HLR LAAS+MP  KL LFPHQ+ AVEWMLHRE NAE+L HPL++ L+TEDGF F+VNT
Sbjct: 267  CHHLRSLAASVMPYTKLNLFPHQRTAVEWMLHRERNAELLPHPLFVALSTEDGFSFHVNT 326

Query: 209  VSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHNG 268
            V+GDI TG APT++DF GGMFCDEPGLGKT+TALSLI+KT+GTLADPPDG +++WC HNG
Sbjct: 327  VTGDIVTGEAPTVKDFRGGMFCDEPGLGKTVTALSLIMKTRGTLADPPDGAQVVWCQHNG 386

Query: 269  DPRCGYYDLS--GDKLT-CNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPLLKRARLV 325
            + +CGYY++S  G+ +T C    LGKR   Q+  R           +D      KRARL+
Sbjct: 387  NQKCGYYEVSVSGNHITGCTT--LGKRDVCQDTSR----------TNDNHDYSSKRARLI 434

Query: 326  DPGDEIEGF-SSFSDVDMISPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICNDR 384
            DP  +I     S S  +  SP+ A  + + H  + T +L ++KKNL  T+++E+ I  +R
Sbjct: 435  DPDQQITKLHDSCSREENKSPVDACFKESMHSNQFTGSLSRIKKNLHFTFEDEAMISKER 494

Query: 385  N-AKGNSTAKKRANSSRQVPKRNQVGLSYVVSNSCERPEKVSTDHFACNETWVQCDACHK 443
               +G   AK   + +  V +              + P K   D F  N+TW+QCDACHK
Sbjct: 495  EIGEGLIKAKHALDVTSHVSQN-------------KSPGKPKGDCFEYNDTWIQCDACHK 541

Query: 444  WRKLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTSDGKKQN 503
            WRKL+D S+A+++AAWFCSMN+DP +QSC  PE+ + N   IT+LPGFH KGT  G+KQN
Sbjct: 542  WRKLVDNSMANSSAAWFCSMNTDPLYQSCSVPEQHFHNICKITHLPGFHLKGTCGGEKQN 601

Query: 504  VSFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSYAAGETQGFHK 563
            VSFF SVLKEHY LINS TKKALTWLAK+S D+L+ MET G+  PIL +      + FHK
Sbjct: 602  VSFFTSVLKEHYSLINSQTKKALTWLAKISTDKLAGMETNGIRGPIL-NICTASNRHFHK 660

Query: 564  IFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSY 623
            IFQAFGL++RVEKG+ +WYYP+ L+NL FD+AAL +AL EPLD VRLYLSRATL+VVP+ 
Sbjct: 661  IFQAFGLLKRVEKGVCKWYYPQHLNNLTFDVAALGMALREPLDFVRLYLSRATLVVVPAN 720

Query: 624  LVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPM 683
            LVDHWKTQI++HVRPGQL ++VWTDH+KPS H LAWDYDVVITTF+RLSAEWG RK+S +
Sbjct: 721  LVDHWKTQIEKHVRPGQLRVYVWTDHQKPSVHCLAWDYDVVITTFSRLSAEWGPRKRSAL 780

Query: 684  MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPML 743
            +QVHW R++LDEGHTLGSSLNLTNKLQMAISL ASNRW+LTGTPTPNTPNSQL HLQP+L
Sbjct: 781  IQVHWFRIILDEGHTLGSSLNLTNKLQMAISLIASNRWILTGTPTPNTPNSQLPHLQPLL 840

Query: 744  KFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEV 803
            +FLHEE+YG NQK+W+ G+LRPFEAEMEEGRSRLL LL +CMISARK DLQ+IP C K+V
Sbjct: 841  RFLHEESYGLNQKSWEAGVLRPFEAEMEEGRSRLLHLLQKCMISARKIDLQSIPPCTKKV 900

Query: 804  TFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCV 863
             +L+F EEHA +YNELV+TVRRNILMADWNDPSH+ESLLNPKQWKFRS T++N+RLSCCV
Sbjct: 901  VYLDFNEEHARSYNELVITVRRNILMADWNDPSHIESLLNPKQWKFRSATLKNVRLSCCV 960

Query: 864  AGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL-------------- 909
            AGHIKVT AGEDIQETMD+LV++GLDP S EY  ++YNLL GG+C+              
Sbjct: 961  AGHIKVTHAGEDIQETMDMLVQSGLDPTSGEYTSVRYNLLYGGHCVRCKEWCRLPLITPC 1020

Query: 910  RHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ-- 967
            RH+LCLDCV++D+ KC+ PGC  LYEMQS E   RPENP PKWPVP+DLIELQPSY+Q  
Sbjct: 1021 RHLLCLDCVSIDNTKCTYPGCSKLYEMQSRE--ARPENPKPKWPVPKDLIELQPSYKQAD 1078

Query: 968  WSNTN----TFLKQDL----------YRPNLESNKAL----------------------- 990
            W +T+    ++L Q L          Y     SN  L                       
Sbjct: 1079 WQSTSSSKVSYLVQRLKALRGTNEETYFNTENSNDDLHIENSLHRSDDKSSIQTCSMSST 1138

Query: 991  -----PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
                 P+KV+IFSQFLEHIH IEQQLT+AGIK+ GMYSPMHSSNK KSL MF+HD++C+A
Sbjct: 1139 KTNLNPEKVLIFSQFLEHIHAIEQQLTIAGIKYTGMYSPMHSSNKKKSLAMFQHDSNCMA 1198

Query: 1046 LLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            LLMDGSA+LGLDLSFVT VFLMEPIWDRSMEEQVISRAHRMGA+RPI+VETLAMRGT+EE
Sbjct: 1199 LLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGASRPIYVETLAMRGTIEE 1258

Query: 1106 QMLEFLQDTDRCRRL-LKEELVKPEREGARSHRTLHDFAESNYLSHLSFVRTN 1157
            QML+FLQD D  RR  +K+     +  G R +R+LHDFAES+YL  L  V TN
Sbjct: 1259 QMLDFLQDADNFRRSPIKDATESVDDSGGRGYRSLHDFAESSYLLKLRSVYTN 1311


>gi|356506967|ref|XP_003522244.1| PREDICTED: F-box protein At3g54460-like [Glycine max]
          Length = 1311

 Score = 1430 bits (3701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 730/1249 (58%), Positives = 904/1249 (72%), Gaps = 123/1249 (9%)

Query: 1    MSVVHQLQSLVNQKCLKIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIA 60
            MSVVHQL ++V +K +KI+ARV+ VE       R  VLVD+Y+P+  WSGWQFP+SG +A
Sbjct: 87   MSVVHQLHAMVTRKFIKIDARVVCVE----ALPRIVVLVDVYVPVQVWSGWQFPRSGPVA 142

Query: 61   GSLFRHVSCDWEKRKSVLLDGGECFKD-GCDSSIWNISDCHVLDWKP------------- 106
            G++F H+SCDW +R S+L     C K  G + SIWN+SDCHVL  K              
Sbjct: 143  GAIFHHLSCDWNERSSMLSYPDYCKKTHGENESIWNLSDCHVLGCKLHSRGRNSSRKRLF 202

Query: 107  ------------------DSSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAAT 148
                              +SS++ P DN C +GI +++DDI+  IL  LGP+DL R++AT
Sbjct: 203  ELHEIFKTLPGVGKRQTFNSSKIMPMDNICRSGIWELSDDILTKILASLGPMDLTRVSAT 262

Query: 149  CRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNT 208
            C HLR LAAS+MP  KL LFPHQ+ AVEWMLHRE NAE L HPL++ L+T+DGF F+VNT
Sbjct: 263  CHHLRSLAASVMPYTKLNLFPHQREAVEWMLHREQNAERLPHPLFVVLSTDDGFSFHVNT 322

Query: 209  VSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHNG 268
            V+G+I TG APT++DF GGMFCDEPGLGKT+TALSLI+KT+GTLADPP+G +++WC HNG
Sbjct: 323  VTGEIVTGEAPTIKDFCGGMFCDEPGLGKTVTALSLIMKTRGTLADPPNGAQVVWCQHNG 382

Query: 269  DPRCGYYDLSGDKLTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPLLKRARLVDPG 328
            + +CGYY++SG+ +T     LGKR   Q+  R           +D      KRARL  P 
Sbjct: 383  NQKCGYYEISGNNIT-GVTTLGKRDVCQDTSR----------TNDNHDYSSKRARLTYPD 431

Query: 329  DEIEGF-SSFSDVDMISPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICNDRNAK 387
             +I     S S  +  SP+ A  +   H  + T++L ++KK+L  T++EE+ I  +R   
Sbjct: 432  QQISKLHDSCSREENKSPVDACFKEYMHSNQFTKSLSRIKKSLHFTFEEEAMIFKEREIG 491

Query: 388  GNSTAKKRANSSRQVPKRNQVGLSYVVSNSCERPEKVSTDHFACNETWVQCDACHKWRKL 447
                  K A+       +N++            P K   D F  ++TW+QCDACHKWRKL
Sbjct: 492  EGLIKAKHASDVTSHVSQNKL------------PGKPKGDRFEYSDTWIQCDACHKWRKL 539

Query: 448  LDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTSDGKKQNVSFF 507
            +D S+A+++AAWFCSMN+DP +QSC  PE+ + N   IT+LPGFH KGT  G++QNVSFF
Sbjct: 540  VDNSMANSSAAWFCSMNTDPLYQSCSVPEQYFHNTCKITHLPGFHIKGTCGGEEQNVSFF 599

Query: 508  ISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSYAAGETQGFHKIFQA 567
             SVLKEHY LINS TKKAL WLA++S D L+ MET G+  PIL +     ++ FHKIFQA
Sbjct: 600  TSVLKEHYSLINSQTKKALMWLAEISTDNLAGMETNGIRGPIL-NICTASSRHFHKIFQA 658

Query: 568  FGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDH 627
            FGL++RVEKG+ +WYYP+ L+NL FD++AL +AL EPLD VRLYLSRATL+VVP+ LVDH
Sbjct: 659  FGLLKRVEKGVCKWYYPQHLNNLTFDVSALGMALREPLDFVRLYLSRATLVVVPANLVDH 718

Query: 628  WKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVH 687
            WKTQI++HVRPGQL ++VWTDH+KPS H LAWDYDVVITTF+RLSAEWG RK+S +MQVH
Sbjct: 719  WKTQIEKHVRPGQLRVYVWTDHRKPSVHCLAWDYDVVITTFSRLSAEWGPRKRSALMQVH 778

Query: 688  WLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
            W R++LDEGHTLGSSLNLTNKLQMAISL ASNRW+LTGTPTP TPNSQL HLQP+L+FLH
Sbjct: 779  WFRIILDEGHTLGSSLNLTNKLQMAISLIASNRWILTGTPTPYTPNSQL-HLQPLLRFLH 837

Query: 748  EEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLN 807
            EE+YG N+K+WD G+LRPFEAEMEEGRSRLL LL +CMISARK DLQ+IP C+K+V +L+
Sbjct: 838  EESYGLNRKSWDAGVLRPFEAEMEEGRSRLLHLLQKCMISARKIDLQSIPPCMKKVVYLD 897

Query: 808  FTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHI 867
            F EEHA +YNELV+TVRRNILMADWNDPSH+ESLLNPKQWKFRS T++N+RLSCCVAGHI
Sbjct: 898  FNEEHARSYNELVITVRRNILMADWNDPSHIESLLNPKQWKFRSATLKNVRLSCCVAGHI 957

Query: 868  KVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL--------------RHIL 913
            KVT AGEDIQETMD+LV++ LDP S EY  I+YNLL GG+C+              RH+L
Sbjct: 958  KVTHAGEDIQETMDMLVQSDLDPTSGEYTSIRYNLLYGGHCVRCKEWCRLLLITPCRHLL 1017

Query: 914  CLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ--WSNT 971
            CLDCV++D+ KC+ PGC  LYEMQS E   RPENP PKWPVP+DLIELQPSY+Q  W +T
Sbjct: 1018 CLDCVSIDNTKCTYPGCSKLYEMQSRE--ARPENPKPKWPVPKDLIELQPSYKQADWQST 1075

Query: 972  NT-------------------------------FLKQDLYRPNLESNKAL---------- 990
            ++                                ++  L+R + +S+             
Sbjct: 1076 SSSKVSYLVQRLKALRGTKSGTNFNTENIIDEMHIENSLHRSDDKSSIQTCFMSSTKTNL 1135

Query: 991  -PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
             P+KV+IFSQFLEHIHVIEQQLT+AGIK+ GMYSPMHSSNK KSL MF+HD++C+ALLMD
Sbjct: 1136 NPEKVLIFSQFLEHIHVIEQQLTIAGIKYTGMYSPMHSSNKKKSLAMFQHDSNCMALLMD 1195

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            GSA+LGLDLSFVT VFLMEPIWDRSMEEQVISRAHRMGA+RPIHVETLAMRGT+EEQML 
Sbjct: 1196 GSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGASRPIHVETLAMRGTIEEQMLG 1255

Query: 1110 FLQDTDRCRRL-LKEELVKPEREGARSHRTLHDFAESNYLSHLSFVRTN 1157
            FLQD D  RR  +K+     +  G R +R+LHDFAES+YL  L  V TN
Sbjct: 1256 FLQDADNFRRSPIKDVTESDDDSGGRGYRSLHDFAESSYLLKLRSVYTN 1304


>gi|297820192|ref|XP_002877979.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
 gi|297323817|gb|EFH54238.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1370

 Score = 1401 bits (3627), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 718/1253 (57%), Positives = 878/1253 (70%), Gaps = 121/1253 (9%)

Query: 1    MSVVHQLQSLVNQKCLKIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIA 60
            +SVV QL +LV  KCL I ++V++++ GENG  RA VLVD+YLPIA WSGWQFPKS A A
Sbjct: 124  ISVVQQLHALVANKCLNIFSQVVKIDKGENGEERAVVLVDVYLPIALWSGWQFPKSQATA 183

Query: 61   GSLFRHVSCDWEKRKSVLLDGGECFKD--GCDSSIWNISDCHVLDWK-----PDS----- 108
             +LF+H+SCDW  R S+L D    +++  G   +IW++SDCHV D K     PDS     
Sbjct: 184  AALFKHLSCDWGLRVSIL-DEESVWEEANGKIKAIWDLSDCHVFDCKLLCNAPDSPKRRL 242

Query: 109  ---------------------SRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAA 147
                                 SRV P  +SC++G+ D++DD++ISIL +L   DL  IAA
Sbjct: 243  FKLHEIFKSLPSPGNHDVSCSSRVLPSTDSCASGVWDLSDDVLISILMKLDTKDLFSIAA 302

Query: 148  TCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVN 207
             CR  R L + I+PCM LKLFPHQQAAV WML RE  AEV  HPLY+   TEDGF FYVN
Sbjct: 303  VCRLFRSLTSLIVPCMNLKLFPHQQAAVGWMLERERKAEVSSHPLYLSFDTEDGFSFYVN 362

Query: 208  TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHN 267
             V+GDI T  AP ++DF GGMFCDEPGLGKTITALSLILKTQGT+ADPP+G+ I+WCTH 
Sbjct: 363  AVTGDIITEAAPMVKDFRGGMFCDEPGLGKTITALSLILKTQGTMADPPEGLPIVWCTHK 422

Query: 268  GDPRCGYYDLSGDKLTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPLLKRARLVDP 327
             D +C YY+ + D+ T N M   KR  S ++ R Q S   F P+ + K   LK+ARL+DP
Sbjct: 423  SDKKCAYYEYTSDQFTSNGMFAVKRFQSPSSCRNQFSFEAFRPLLESKSLPLKQARLMDP 482

Query: 328  GDE-IEGFSSFSDVDMISPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICNDRNA 386
             D+ +E  +S  + +  + + AS +      +C + LG V+KNL H YD  S +     A
Sbjct: 483  ADQTLESKNSNFENEFETHIPASLDVK---AQCRKPLGNVRKNLLHVYDGASELSKVMEA 539

Query: 387  KGNSTAKKRANSSRQVPKRNQVGLSYVVSNSCERPEKVSTDHFACNETWVQCDACHKWRK 446
            K     KK                   +   C+R  K  TD    ++ W+QCD+C KWR+
Sbjct: 540  KRIGNWKKCG-----------------MITGCKR--KGLTDSDVESDIWIQCDSCSKWRR 580

Query: 447  LLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTSDGKKQNVSF 506
            ++D  V+   +AWFCS N+DP +QSC DPEE WD  Q I YL GF+ KG S  +  N+SF
Sbjct: 581  IIDEGVSVTGSAWFCSNNADPAYQSCNDPEELWDRSQPIKYLQGFYTKGASGEENDNISF 640

Query: 507  FISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSYAAGETQGFHKIFQ 566
            F SVL+EH   +NS  KKAL WLAKL  ++LS+MET GL  P+LG     +  GF  IF+
Sbjct: 641  FTSVLREHKSSVNSTVKKALIWLAKLPLEKLSQMETVGLPGPVLG--LNKDALGFQTIFR 698

Query: 567  AFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVD 626
            AFGL  RVEKG+T+W+YPK L+NL FD+ AL++ALC+PLD+ RLYLS+ATLIVVP+ LV+
Sbjct: 699  AFGLKSRVEKGVTKWFYPKFLENLVFDVPALKVALCQPLDTFRLYLSKATLIVVPTNLVN 758

Query: 627  HWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQV 686
            HW TQIQ+HV   QL L VWTDH + S HSLAWDYDVVITTF+RLSAEW  RKKSP++QV
Sbjct: 759  HWTTQIQKHVCSDQLRLLVWTDHIELSPHSLAWDYDVVITTFSRLSAEWNPRKKSPLIQV 818

Query: 687  HWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
            HWLRVMLDEGHTLGSS++LTNK QMA+SLTA +RWLLTGTPTPNTPNSQLSH+QP+LKFL
Sbjct: 819  HWLRVMLDEGHTLGSSVSLTNKFQMAVSLTACSRWLLTGTPTPNTPNSQLSHIQPLLKFL 878

Query: 747  HEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFL 806
            HE+ YG+N K W+ GILRPFEAEMEEGR RLLQLL RCMIS+RK DL+ IP CIK+VT+L
Sbjct: 879  HEKVYGENPKFWEAGILRPFEAEMEEGRLRLLQLLQRCMISSRKKDLKMIPPCIKKVTYL 938

Query: 807  NFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGH 866
            NF   HA +YNELV TVRRNIL+ADWNDPSHVESLLN KQWKFRS TI N+RLSCCVAGH
Sbjct: 939  NFLPGHARSYNELVETVRRNILLADWNDPSHVESLLNSKQWKFRSITISNVRLSCCVAGH 998

Query: 867  IKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNC--------------LRHI 912
            IK+TDAG DI+ETMD L+ENGLD  ++EY+FI+ +L+ G NC               RH+
Sbjct: 999  IKMTDAGHDIKETMDALLENGLDLSTEEYSFIQDSLIGGCNCKRCGEWCRLPVITPCRHL 1058

Query: 913  LCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ----- 967
            LCLDCVA+DSE+C++PGCG+LYEMQ+PE L RPENPNPKWPVP+DLIELQPSY+Q     
Sbjct: 1059 LCLDCVALDSERCTIPGCGYLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNP 1118

Query: 968  -WSNTN------------------------------------------TFLKQDLYRPNL 984
             W +T+                                          TFL ++ +  + 
Sbjct: 1119 DWQSTSSSKVSYLVDRLRKLREGNRKSILSFNKTDNDNLEDNPAGTSGTFLGKESHGQDC 1178

Query: 985  ESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCL 1044
             S     DKV+IFSQFLEHIHVIEQQLT AGIKF  MYSPMHS NK+KSL MF++DA C+
Sbjct: 1179 GSQMVFVDKVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMHSCNKMKSLAMFQNDADCM 1238

Query: 1045 ALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            ALLMDGSA+LGLDLSFVT VFLMEPIWD+S+EEQVISRAHRMGA RPI VETL M GT+E
Sbjct: 1239 ALLMDGSAALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMCGTIE 1298

Query: 1105 EQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLSHLSFVRTN 1157
            EQM+ FL+D ++  RLL  + ++ ++E  RS RTLHD AESNYLSHLSFVR +
Sbjct: 1299 EQMMRFLEDAEKSDRLLSGDYIEAKQETTRSRRTLHDLAESNYLSHLSFVRCD 1351


>gi|22331785|ref|NP_680129.1| F-box protein [Arabidopsis thaliana]
 gi|75181828|sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460
 gi|7258349|emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana]
 gi|20259494|gb|AAM13867.1| unknown protein [Arabidopsis thaliana]
 gi|28393845|gb|AAO42330.1| unknown protein [Arabidopsis thaliana]
 gi|110742559|dbj|BAE99194.1| RING finger -like protein [Arabidopsis thaliana]
 gi|332645713|gb|AEE79234.1| F-box protein [Arabidopsis thaliana]
          Length = 1378

 Score = 1392 bits (3604), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 713/1253 (56%), Positives = 877/1253 (69%), Gaps = 121/1253 (9%)

Query: 1    MSVVHQLQSLVNQKCLKIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIA 60
            +SVV QL +LV  KCLKI  RV++V+ GENG  RA VLVD+YLPI  WSGWQFPKS A A
Sbjct: 132  ISVVQQLHALVANKCLKIICRVVKVDKGENGEERAVVLVDVYLPIELWSGWQFPKSQATA 191

Query: 61   GSLFRHVSCDWEKRKSVLLDGGECFKD--GCDSSIWNISDCHVLDWK-----PDS----- 108
             +LF+H+SCDW  R S+L DG   +++  G   +IW++SDCHV D K     P+S     
Sbjct: 192  AALFKHLSCDWGLRVSIL-DGKSIWEEANGRIKAIWDLSDCHVFDCKLLCNAPNSPKRRL 250

Query: 109  ---------------------SRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAA 147
                                 SRV P  +SC +G+ D++DD++ISIL +L   DL  IAA
Sbjct: 251  FKLHEIFKSLPSPGNHDVSYSSRVLPSTDSCVSGVWDLSDDVLISILMKLDTKDLFSIAA 310

Query: 148  TCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVN 207
             CR  R L + I+PCM LKLFPHQQAAV WML RE  AEV  HPLY+   TEDGF FYVN
Sbjct: 311  VCRLFRSLTSLIVPCMNLKLFPHQQAAVGWMLERERKAEVSSHPLYLSFDTEDGFSFYVN 370

Query: 208  TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHN 267
             V+GDI T  AP ++DF GGMFCDEPGLGKTITALSLILKTQGT+ADPP+G+ I+WCTH 
Sbjct: 371  AVTGDIITEAAPMVKDFRGGMFCDEPGLGKTITALSLILKTQGTMADPPEGLPIVWCTHK 430

Query: 268  GDPRCGYYDLSGDKLTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPLLKRARLVDP 327
             D +C YY+ + D+ T N+M   KR  S ++ R Q+S   F P+ + K    K+ARL+DP
Sbjct: 431  SDKKCAYYEYTSDQFTSNSMSAVKRFQSPSSCRNQVSFEAFRPLLESKSLPFKQARLMDP 490

Query: 328  GDE-IEGFSSFSDVDMISPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICNDRNA 386
             D+ +E  +S  + +  + + AS +      +C ++LG V+KNL   Y+  S +     A
Sbjct: 491  DDQTLESKNSNFENEFETHIPASLDLK---AQCRKSLGNVRKNLLPAYNGASELSEVMEA 547

Query: 387  KGNSTAKKRANSSRQVPKRNQVGLSYVVSNSCERPEKVSTDHFACNETWVQCDACHKWRK 446
            K  S  KK                   +   C+R  K  TD    ++ W+QCD+C KWR+
Sbjct: 548  KRISNWKKCG-----------------MITGCKR--KGLTDSDVESDIWMQCDSCSKWRR 588

Query: 447  LLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTSDGKKQNVSF 506
            ++D  V+   +AWFCS N+DP +QSC DPEE WD  Q I YL GF+ KG S  +  N+SF
Sbjct: 589  IIDEGVSVTGSAWFCSNNNDPAYQSCNDPEELWDKSQPIKYLQGFYTKGASGEESDNISF 648

Query: 507  FISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSYAAGETQGFHKIFQ 566
            F SVL+EH   ++S  KKAL WLAKL  ++LS+MET GL  P+LG     +  GF +IF+
Sbjct: 649  FTSVLREHKSSVSSTVKKALIWLAKLPLEKLSQMETVGLPGPVLG--LKLDALGFQRIFR 706

Query: 567  AFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVD 626
            AFGL  RVEKG+T+W+YPK L+NL FD+ AL++ALC+PLD+ RLYLS+ATLIVVP+ LV+
Sbjct: 707  AFGLKSRVEKGVTKWFYPKFLENLVFDVPALKVALCQPLDTFRLYLSKATLIVVPTNLVN 766

Query: 627  HWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQV 686
            HW TQIQ+HV   QL + VW DH + S HSLAWDYDVVITTF+RLSAEW  RKKSP++QV
Sbjct: 767  HWLTQIQKHVCSDQLRILVWADHIELSPHSLAWDYDVVITTFSRLSAEWNPRKKSPLIQV 826

Query: 687  HWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
            HWLRVMLDEGHTLGSS++LTNK QMA+SLTA NRWLLTGTPTPNTPNSQLSH+QP+LKFL
Sbjct: 827  HWLRVMLDEGHTLGSSVSLTNKFQMAVSLTACNRWLLTGTPTPNTPNSQLSHIQPLLKFL 886

Query: 747  HEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFL 806
            HEE YG+N K W+ GILRPFEAEMEEGR RLLQLL RCMIS+RK DLQ IP CIK+VT+L
Sbjct: 887  HEEVYGENPKFWEAGILRPFEAEMEEGRLRLLQLLQRCMISSRKKDLQMIPPCIKKVTYL 946

Query: 807  NFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGH 866
            NF   HA +YNELV TVRRNIL+ADWNDPSHVESLLN KQWKFRS TI N+RLSCCVAGH
Sbjct: 947  NFLPGHARSYNELVETVRRNILLADWNDPSHVESLLNSKQWKFRSITISNVRLSCCVAGH 1006

Query: 867  IKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNC--------------LRHI 912
            IK+TDAG DI+ETMD L+EN LD  ++EY+FI+ +L+ G NC               RH+
Sbjct: 1007 IKMTDAGHDIKETMDALLENDLDLWTEEYSFIQDSLIGGCNCKRCGEWCRLPVITPCRHL 1066

Query: 913  LCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ----- 967
            LCLDCVA+DSE+C++ GCG+LYEMQ+PE L RPENPNPKWPVP+DLIELQPSY+Q     
Sbjct: 1067 LCLDCVALDSERCTISGCGYLYEMQTPETLARPENPNPKWPVPKDLIELQPSYKQDDWNP 1126

Query: 968  -WSNTNT------------------------------------------FLKQDLYRPNL 984
             W +T++                                          FL ++L+  + 
Sbjct: 1127 DWQSTSSSKVSYLVDRLRKLHEGNKKSILSFNKTDNDNLEDNPPGTSEAFLGKELHGQDC 1186

Query: 985  ESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCL 1044
             S     DKV+IFSQFLEHIHVIEQQLT AGIKF  MYSPM S NK+K+L MF++DA C+
Sbjct: 1187 GSQMVFVDKVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDADCM 1246

Query: 1045 ALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            ALLMDGS +LGLDLSFVT VFLMEPIWD+S+EEQVISRAHRMGA RPI VETL MRGT+E
Sbjct: 1247 ALLMDGSGALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIE 1306

Query: 1105 EQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLSHLSFVRTN 1157
            EQM+ FL+D ++  RLL  + ++ ++E  RS RTLHD  ESNYLSHLSFVR++
Sbjct: 1307 EQMMRFLEDAEKSDRLLSGDYIEAKQETTRSRRTLHDLVESNYLSHLSFVRSD 1359


>gi|115442277|ref|NP_001045418.1| Os01g0952200 [Oryza sativa Japonica Group]
 gi|57899941|dbj|BAD87853.1| putative rad8 [Oryza sativa Japonica Group]
 gi|113534949|dbj|BAF07332.1| Os01g0952200 [Oryza sativa Japonica Group]
 gi|218189747|gb|EEC72174.1| hypothetical protein OsI_05224 [Oryza sativa Indica Group]
 gi|222619881|gb|EEE56013.1| hypothetical protein OsJ_04781 [Oryza sativa Japonica Group]
          Length = 1298

 Score = 1331 bits (3444), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/1262 (54%), Positives = 857/1262 (67%), Gaps = 154/1262 (12%)

Query: 3    VVHQLQSLVNQKCLKIEARVMRV---------EIGENGAARAAVLVDIYLPIAAWSGWQF 53
            VV QL++LV+ +C+++E RV+R                 ARA VL D+YLP++ WSGWQF
Sbjct: 74   VVRQLRALVSSRCVEVEGRVLRAVARRGREGGGGDGEVEARAVVLFDVYLPVSVWSGWQF 133

Query: 54   PKS-GAIAGSLFRHVSCDWEKRKSVLL------DGGECFKDGCDSSIWNISDCHVL---- 102
            P+S  A A ++F+HVSC+W+ R ++L       D   C     D  IW  +DCHVL    
Sbjct: 134  PRSRAAAAAAVFKHVSCNWDARNALLAFNWTSPDNPHCD----DQYIWTCTDCHVLGCEV 189

Query: 103  ---------------------------DWKPDSSRVKPEDNSCSTGISDIADDIVISILT 135
                                       + +   +R+ P++ +   GI  + DD++  +L 
Sbjct: 190  HQIPSVLNNDKSFDLHEIFKTLPSVMVEKRMQITRITPDEAASGVGIWSVPDDVLYKVLV 249

Query: 136  RLGPIDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYID 195
            RL P DL+R+AA C HLR L+ASIMPCMKLKLFPHQ+AAVEWML RE N +VL HPLY  
Sbjct: 250  RLKPRDLIRVAAACHHLRNLSASIMPCMKLKLFPHQEAAVEWMLRREQNLQVLEHPLYKG 309

Query: 196  LATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADP 255
            L T DGF +Y+N  SG+I+TG+APT+ DF GGMFCDEPGLGKT+TALSLILKT GTLA P
Sbjct: 310  LCTMDGFPYYINVTSGEISTGSAPTVHDFCGGMFCDEPGLGKTVTALSLILKTHGTLAVP 369

Query: 256  PDGVKIIWCTHNGDPRCGYYDLSGDKLTCNNMCL-GKRTFSQNARRRQL----SVGKFTP 310
            P G+ ++WC H  D + GYY+LS    +  N+ L G +   ++  R       S+     
Sbjct: 370  PPGMNVMWCMHKPDKKYGYYELSASNSSNGNIFLSGSKKLRKDVIREDTCSSESLNNGGS 429

Query: 311  MDDLKCPLLKRARLVDPGDEIEGFSSFSDVDMISPLVASSEPATHLVRCTRNLGQVKKNL 370
            +   +    KR RLV+P   +          M +P  A S PATH+++ T+NL  V+KNL
Sbjct: 430  VVSTRSSR-KRGRLVNPDLNMIAAHPSGKSPMSAPTGAHSTPATHVLKITKNLKHVRKNL 488

Query: 371  FHTYDEESNICNDRNAKGNSTAKKRANSSRQVPKRNQVGLSYVVSNSCERPEKVSTDHFA 430
               Y +           G+   K++ +++ ++                            
Sbjct: 489  MEAYSD-----------GSVGNKRKRDATSEL---------------------------- 509

Query: 431  CNETWVQCDACHKWRKLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPG 490
             +ETWVQCDAC KWR+LLD +  D++ AWFCSMN D   Q C  PEE+WD  + ITYLPG
Sbjct: 510  -SETWVQCDACRKWRRLLDGTALDSSTAWFCSMNPDSARQKCSIPEESWDLKRKITYLPG 568

Query: 491  FHAKGTSDGKKQNVSFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPIL 550
            FH KGT  G +QN SFF ++LKEH  LI+S T KAL WLAKLSP +  EME  GL  P+L
Sbjct: 569  FHKKGTPPGNEQNASFFTNILKEHAALIDSETMKALLWLAKLSPKKHIEMEAVGLTRPVL 628

Query: 551  GSYA--AGETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSV 608
             + A      + ++KIFQAFGL+R+VEKGITRWYYP  LD+LAFD AAL +AL +PLD V
Sbjct: 629  DARANIGKGARPYYKIFQAFGLVRKVEKGITRWYYPSMLDDLAFDSAALGIALEKPLDLV 688

Query: 609  RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
            RLYLSRATLIVVP+ L+DHW TQIQ+HV    L+++VW DHKKPSAH+LAWDYD+VITTF
Sbjct: 689  RLYLSRATLIVVPANLIDHWTTQIQRHVSSDTLNVYVWGDHKKPSAHNLAWDYDIVITTF 748

Query: 669  NRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            +RLSAEWG +K+S + Q+HW RV+LDEGHTLGSSL LTNKLQMA+SL ASNRW+LTGTPT
Sbjct: 749  SRLSAEWGPKKRSVLKQIHWFRVILDEGHTLGSSLALTNKLQMAVSLVASNRWILTGTPT 808

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
            PNTP SQ++HL PMLKFLHEE YGQN ++WD GI RPFEA+ME+GRSRLLQLL R MISA
Sbjct: 809  PNTPTSQVAHLHPMLKFLHEEVYGQNYQSWDTGIHRPFEAQMEDGRSRLLQLLQRTMISA 868

Query: 789  RKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWK 848
            RK DL+ IP CIK++TFL+F+E HA +YNEL VT+RRNILMADWNDPSHVESLLNPKQWK
Sbjct: 869  RKQDLKNIPPCIKKITFLDFSEGHAKSYNELAVTIRRNILMADWNDPSHVESLLNPKQWK 928

Query: 849  FRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNC 908
            FR+TTI+N+RLSCCVAGHIKV +AG+DIQETMD L++ GLDP S EY  I+Y LLNG +C
Sbjct: 929  FRTTTIKNVRLSCCVAGHIKVAEAGQDIQETMDALMQLGLDPSSGEYQSIRYALLNGASC 988

Query: 909  L--------------RHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV 954
                           RH+LCLDCVA+DSEKC+LPGCG  YEMQ+PE   RPENPNPKWPV
Sbjct: 989  FRCRDWCRLPVVTPCRHLLCLDCVALDSEKCTLPGCGNHYEMQTPETRARPENPNPKWPV 1048

Query: 955  PQDLIELQPSYRQ------WSNTNT----FLKQDL-----------YRPNLESNKAL--- 990
            P+DLIELQPSY+Q      W +T +    +L   L           Y  N+ +   L   
Sbjct: 1049 PKDLIELQPSYKQDDWDPDWQSTTSSKVAYLVNKLRSLKAENIKHGYSRNMANGACLSSQ 1108

Query: 991  -----------------PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKS 1033
                             PDKVIIFSQFLEHIHVIEQQLT+ GI +AGMYSPM   +K  S
Sbjct: 1109 SSCQDHNNVEGRLPHTMPDKVIIFSQFLEHIHVIEQQLTIGGITYAGMYSPMPLGSKRSS 1168

Query: 1034 LDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIH 1093
            L  F+ D +C+AL+MDG+A+LGLDLSFV+ VFLMEPIWDRSMEEQVISRAHRMGATRPI 
Sbjct: 1169 LTKFKDDPACMALVMDGTAALGLDLSFVSYVFLMEPIWDRSMEEQVISRAHRMGATRPIF 1228

Query: 1094 VETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLSHLSF 1153
            VETLAMRGT+EEQML+ LQD++ CR+++ +     + EGAR HR+LHDFAES+YL+ LSF
Sbjct: 1229 VETLAMRGTIEEQMLKLLQDSNACRQMVNKGTSSTDNEGARPHRSLHDFAESSYLAQLSF 1288

Query: 1154 VR 1155
            V+
Sbjct: 1289 VK 1290


>gi|357131703|ref|XP_003567474.1| PREDICTED: F-box protein At3g54460-like [Brachypodium distachyon]
          Length = 1306

 Score = 1269 bits (3285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 679/1266 (53%), Positives = 837/1266 (66%), Gaps = 162/1266 (12%)

Query: 2    SVVHQLQSLVNQKCLKIEARVMRV-----EIGENGAARAAVLVDIYLPIAAWSGWQFPKS 56
            SVV QL+SLV Q+C+++E RV+RV     E GE   ARA VLVD+YLP AAWSGWQFP+ 
Sbjct: 79   SVVRQLKSLVAQRCVEVEGRVLRVMARRGEGGEVVEARAVVLVDVYLPAAAWSGWQFPRH 138

Query: 57   GAIAG-SLFRHVSCDWEKRKSVL-LDGGECFKDGCDSS-IWNISDCHVLDWKPDS----- 108
             A A  ++F+H+SC W+ R +++  D        CD    W+ +DCHVL  +        
Sbjct: 139  RASAAVAVFKHLSCKWDARNALVDFDWSSHDNPHCDDQYTWSCTDCHVLGCEIHQRSSIS 198

Query: 109  --------------------------SRVKPE---DNSCSTGISDIADDIVISILTRLGP 139
                                      +R+ P+   DN+   GI  + DDI+  ++ RL P
Sbjct: 199  NNEKSFDLHEIFKVLPSVRVEKGMQITRIIPDNILDNAPGLGIWSLPDDILNKVINRLKP 258

Query: 140  IDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATE 199
             DL+R+A+TC HLR LA+SIMPCMKLKLFPHQ+AAVEWML RE N+E L HPL  D  T+
Sbjct: 259  RDLIRVASTCHHLRALASSIMPCMKLKLFPHQEAAVEWMLKREQNSEPLPHPLCKDFCTD 318

Query: 200  DGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGV 259
            DG  FY+N  SG+I TG APT+ DF GGMFCDEPGLGKT+TALSLILKT GTLA+PP GV
Sbjct: 319  DGLRFYINVTSGEIFTGNAPTINDFGGGMFCDEPGLGKTVTALSLILKTHGTLANPPKGV 378

Query: 260  KIIWCTHNGDPRCGYYDLSG-DKLTCNNMCLG-KRTFSQNARRRQLSVGKFTPMDDLKCP 317
             + WCTH  D + GYY+ S  D     +   G +R   ++   R+         +    P
Sbjct: 379  DVKWCTHKPDKKYGYYEFSASDSSNRTDFVSGTERLAGKDDVIREDPSSSDLSHNGGSVP 438

Query: 318  LL----KRARLVDPGDEIEGFSSFSDVDM-------ISPLVASSEPATHLVRCTRNLGQV 366
                  KR RLV P          + V+M         P  +   PAT +++  +N   V
Sbjct: 439  STRSSRKRGRLVGP--------DLTSVNMHVMGEKSPEPCNSLPMPATQVLKFKKNSKNV 490

Query: 367  KKNLFHTYDEESNICNDRNAKGNSTAKKRANSSRQVPKRNQVGLSYVVSNSCERPEKVST 426
            +KNL + Y ++S            + +KR  +                            
Sbjct: 491  RKNLMNAYSKDSV----------GSKRKRGTA---------------------------- 512

Query: 427  DHFACNETWVQCDACHKWRKLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSIT 486
                 N+TWVQCD C KWR+L D +  D+T AWFCSMN+D   ++C  PEE+WD+   IT
Sbjct: 513  --LEFNDTWVQCDGCRKWRRLSDKTDLDSTTAWFCSMNADAARKTCTAPEESWDSKGKIT 570

Query: 487  YLPGFHAKGTSDGKKQNVSFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLA 546
            YLPGFH K    G +QNVSFF ++LK++   INS TKKAL+WLA+LS  +  EME+ G+ 
Sbjct: 571  YLPGFHKKDALPGDEQNVSFFTNILKDNVSSINSETKKALSWLAQLSLKKHVEMESVGVT 630

Query: 547  SPILGSYA--AGETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEP 604
             P+L + A      + ++KIFQAFGL+R++EKG+TRWYYP  LD LAFD  AL +AL  P
Sbjct: 631  RPVLDARATIGKGARPYYKIFQAFGLVRKIEKGVTRWYYPSMLDELAFDSTALGIALENP 690

Query: 605  LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVV 664
            LD VR YLSRATLIVVP+ L+DHW TQIQ+HV    L+++ W DHKKPSAH LAWDYD+V
Sbjct: 691  LDIVRFYLSRATLIVVPANLIDHWTTQIQRHVSSDTLNVYAWGDHKKPSAHILAWDYDIV 750

Query: 665  ITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLT 724
            ITTFNRLSAEWG +K+S + Q+HW RV+LDEGHTLGSSL LTNK QMA+SL ASNRW+LT
Sbjct: 751  ITTFNRLSAEWGPQKRSVLKQIHWYRVILDEGHTLGSSLALTNKFQMAVSLVASNRWILT 810

Query: 725  GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRC 784
            GTPTPNTP SQ++HL PMLKFLHEE YGQ+ ++WD GI RPFEA+MEEGR RL+QLL R 
Sbjct: 811  GTPTPNTPTSQVAHLHPMLKFLHEEVYGQDHQSWDTGIHRPFEAQMEEGRIRLVQLLQRT 870

Query: 785  MISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNP 844
            MISARK +L+ IP CIK +TF++F+E HA +YNELVVT+RRNILMADWNDPSHVESLLNP
Sbjct: 871  MISARKANLRNIPPCIKNITFVDFSEGHAKSYNELVVTIRRNILMADWNDPSHVESLLNP 930

Query: 845  KQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLN 904
            KQWKFR+TTIRN+RLSCCVAGHIKV +AG+DIQETMD L++ GLDP S+EY  I+Y LLN
Sbjct: 931  KQWKFRATTIRNVRLSCCVAGHIKVEEAGQDIQETMDDLMKLGLDPSSEEYQSIRYALLN 990

Query: 905  GGNCLR--------------HILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNP 950
            G +C+R              H+LC DCVA+DSEKC    CG  YEMQSPE L RPENPNP
Sbjct: 991  GTDCIRCGDWCRLPVITPCQHLLCHDCVALDSEKCI--KCGNNYEMQSPETLARPENPNP 1048

Query: 951  KWPVPQDLIELQPSYRQ------WSNTNT---FLKQDLYRPNLESN-------------- 987
            KWPVP+DLIELQPSY+Q      W +T +       D  R   E+N              
Sbjct: 1049 KWPVPKDLIELQPSYKQDDWDPDWQSTTSSKVAYLVDKLRSLREANIKHRHSTNITNGAG 1108

Query: 988  ------------------KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSN 1029
                              +A+  KVIIFSQFLEHIHVIEQQLT+AGI +AGMYSPM  S 
Sbjct: 1109 LAIESSYQDDNNVEVRLPQAMSHKVIIFSQFLEHIHVIEQQLTIAGITYAGMYSPMPLST 1168

Query: 1030 KIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGAT 1089
            K  +L  F+ D +C+ALLMDG+A+LGLDLSFV  VFLMEPIWDRSMEEQVISRAHRMGAT
Sbjct: 1169 KRNALTKFQDDPTCMALLMDGTAALGLDLSFVNHVFLMEPIWDRSMEEQVISRAHRMGAT 1228

Query: 1090 RPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLS 1149
             PI+VETLAMRGT+EEQML+ LQD+  CR ++ +     E EGAR HR+LHDFAES+YL+
Sbjct: 1229 CPINVETLAMRGTIEEQMLKLLQDSSACRNIVNKGASSTENEGARPHRSLHDFAESSYLA 1288

Query: 1150 HLSFVR 1155
             LSFV+
Sbjct: 1289 KLSFVK 1294


>gi|147863931|emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]
          Length = 1208

 Score = 1211 bits (3134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 592/789 (75%), Positives = 652/789 (82%), Gaps = 68/789 (8%)

Query: 438  CDACHKWRKLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTS 497
            CDACHKWR+L + SVADATAAWFCSMNSDP++QSC  PEE+WD+ Q ITYLPGF+AKGT 
Sbjct: 418  CDACHKWRRLGEPSVADATAAWFCSMNSDPSYQSCRVPEESWDDRQPITYLPGFYAKGTP 477

Query: 498  DGKKQNVSFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSY-AAG 556
             G++QNVSFF SVLKEHY  INS TKKAL WL KLSP++LSEM+T GL  P+L ++  +G
Sbjct: 478  GGEEQNVSFFTSVLKEHYAFINSQTKKALIWLTKLSPNKLSEMDTVGLRRPVLDTHLVSG 537

Query: 557  ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRAT 616
               GFHKIFQAFGL+RRVEKG +RWYYP+ L+NL FDL ALR+ALCEPLDS RLYLSRAT
Sbjct: 538  GDHGFHKIFQAFGLVRRVEKGTSRWYYPENLENLVFDLPALRIALCEPLDSFRLYLSRAT 597

Query: 617  LIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWG 676
            L+VVPS LVDHWKTQIQ+HV+PGQL ++VWTDHKKP AH+LAWDYDVVITTFNRLSAEW 
Sbjct: 598  LVVVPSNLVDHWKTQIQKHVKPGQLRVYVWTDHKKPCAHNLAWDYDVVITTFNRLSAEWR 657

Query: 677  RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQL 736
             RK+S +MQVHWLRVMLDEGHTLGSSLNLTNKLQMA+SL ASNRWLLTGTPTPNTPNSQL
Sbjct: 658  PRKRSVLMQVHWLRVMLDEGHTLGSSLNLTNKLQMAVSLIASNRWLLTGTPTPNTPNSQL 717

Query: 737  SHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTI 796
            SHLQPMLKFLHEE YGQNQK+W+ GILRPFEAEMEEGRSRLL LLHRCMISARK DLQTI
Sbjct: 718  SHLQPMLKFLHEEGYGQNQKSWEDGILRPFEAEMEEGRSRLLLLLHRCMISARKADLQTI 777

Query: 797  PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRN 856
            P CIK+VTFLNFTEEHA +YNELVVTVRRNILMADWNDPSHVESLLNPKQWKFR +TI+N
Sbjct: 778  PPCIKKVTFLNFTEEHAKSYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRISTIKN 837

Query: 857  LRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL------- 909
            +RLSCCVAGHIKVTDAGEDIQETMD+LVENGLDP+S EYAFIKYNLL GG C+       
Sbjct: 838  VRLSCCVAGHIKVTDAGEDIQETMDILVENGLDPISDEYAFIKYNLLYGGACMRCKEWCR 897

Query: 910  -------RHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQ 962
                   RH+LCLDCVA+DSEKC+ PGCG LYEMQSPEILTRPENPNPKWPVP+DLIELQ
Sbjct: 898  LPVITPCRHLLCLDCVALDSEKCTFPGCGNLYEMQSPEILTRPENPNPKWPVPKDLIELQ 957

Query: 963  PSYRQ--W---------------------------------------------------S 969
            PSY+Q  W                                                   +
Sbjct: 958  PSYKQDTWDPDWQSTSSSKVTYIVKRLKALQEANRKSGYAMDEDSDIKDIDELVSLSEQN 1017

Query: 970  NTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSN 1029
            N N  L+QD  R N E++   P+KV+IFSQFLEHIHVIEQQLTVAGIKF+GMYSPMHSSN
Sbjct: 1018 NCNALLQQDYTRLNDETSHISPEKVLIFSQFLEHIHVIEQQLTVAGIKFSGMYSPMHSSN 1077

Query: 1030 KIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGAT 1089
            K+KSL  F+HDA C+ALLMDGSA+LGLDLSFVT VFLMEPIWDRSMEEQVISRAHRMGAT
Sbjct: 1078 KMKSLSTFQHDADCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGAT 1137

Query: 1090 RPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLS 1149
            RPI VETLAMRGT+EEQMLEFLQD D CRR LKEE  KP  EG R+HR+LHDFAESNYL+
Sbjct: 1138 RPIRVETLAMRGTIEEQMLEFLQDADECRRFLKEEFGKPYSEGVRAHRSLHDFAESNYLA 1197

Query: 1150 HLSFVRTNS 1158
            HLSFVRTNS
Sbjct: 1198 HLSFVRTNS 1206



 Score =  414 bits (1065), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/333 (60%), Positives = 241/333 (72%), Gaps = 37/333 (11%)

Query: 1   MSVVHQLQSLVNQKCLKIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIA 60
           +SVV Q+ +LV  KC+KI ARV+RV     G ARA VLVD+YLPI  WSGWQFP+S + A
Sbjct: 87  ISVVRQIHALVVHKCVKIVARVVRV----CGEARAVVLVDVYLPIELWSGWQFPRSASTA 142

Query: 61  GSLFRHVSCDWEKRKSVLLDGGECFK--DGCDSSIWNISDCHVLDWK------------- 105
           G+LFRH+SCDWE+R SVL++  E +K  DG + S+WN+SDCHVL  K             
Sbjct: 143 GALFRHLSCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDCHVLGCKLHCNALDPSKKKL 202

Query: 106 ------------------PDSSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAA 147
                             PDSSRVKP D SC +GI +++DD++I+ILT L P+DLVR++A
Sbjct: 203 FELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWEVSDDVLINILTALAPMDLVRVSA 262

Query: 148 TCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVN 207
           TC HLR LAASIMPCMKLKLFPHQ AAVEWML RE NAE+L HPL+ID  TEDGF FY+N
Sbjct: 263 TCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRERNAEILPHPLFIDFLTEDGFAFYIN 322

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHN 267
           TV+G+I TG  P +RDF GGMFCDEPGLGKTITALSLILKTQGT ADPPDGV++IWCTHN
Sbjct: 323 TVTGEIVTGMPPLIRDFRGGMFCDEPGLGKTITALSLILKTQGTWADPPDGVQVIWCTHN 382

Query: 268 GDPRCGYYDLSGDKLTCNNMCLGKRTFSQNARR 300
            D RCGYY+L+ D ++ N M  GKR   Q   +
Sbjct: 383 SDQRCGYYELTSDNVSVNKMFSGKRILGQGCSK 415


>gi|307136385|gb|ADN34195.1| chromatin remodeling complex subunit [Cucumis melo subsp. melo]
          Length = 1037

 Score = 1127 bits (2916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/928 (60%), Positives = 695/928 (74%), Gaps = 55/928 (5%)

Query: 1    MSVVHQLQSLVNQKCLKIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIA 60
            MSVV+Q+ +LV  KC+KI+A+V  V+I E   ARA +LVD+YLP+  WSGWQFPKS  +A
Sbjct: 127  MSVVYQIHALVVHKCMKIDAQVTFVDIQE---ARAVLLVDVYLPVELWSGWQFPKSKTVA 183

Query: 61   GSLFRHVSCDWEKRKSVLLDGGECFKD--GCDSSIWNISDCHVLDWK------------- 105
             +LF+H+SC+W++R S+L+ G +  +D      S+ N+++CHV + K             
Sbjct: 184  AALFKHLSCEWQERSSILV-GKDHSQDVHMVGKSVSNVAECHVHNCKLHNSSGGSPNRRL 242

Query: 106  ------------------PDSSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAA 147
                              P+ +R++PED+   +GI DI+DDI+ +IL  L P+DLVR+A+
Sbjct: 243  FELHEIFRSLPSILKSSKPEYTRMQPEDDYAQSGIWDISDDILFNILKALRPLDLVRVAS 302

Query: 148  TCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVN 207
            TCRHLR LAA IMPCMKLKL+PHQQAAVEWMLHRE +AEV  HPL+   +TEDGF F+VN
Sbjct: 303  TCRHLRSLAALIMPCMKLKLYPHQQAAVEWMLHRERHAEVFYHPLFAPSSTEDGFSFHVN 362

Query: 208  TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHN 267
            TV+G+I TG AP + DF GG+FCDEPGLGKTITALSLILKTQGTLA+PP GV+I+WCTHN
Sbjct: 363  TVTGEIVTGGAPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWCTHN 422

Query: 268  GDPRCGYYDLSGDKLTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPLLKRARLVDP 327
            G+ +CGYY++S    T  N  L K     N+            ++DL     KRAR+   
Sbjct: 423  GNRKCGYYEVSSTSNTITNHFLLKEAVEWNS---------LKGLEDLTYRTPKRARMTTL 473

Query: 328  GDEIEGFSSFSDVDMISPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICNDRNAK 387
             D     SS +  ++ SP  A    A H+VRCTR+L  VK+NL   Y+  S++  + N  
Sbjct: 474  DDRHTTNSSCAGNELRSPSSADYAKAVHMVRCTRSLSSVKRNLLLAYEGASSLSKELNDG 533

Query: 388  GNSTAKKRANSSRQVP---KRNQVGLSYVVSNSCERPEKVSTDHFACNETWVQCDACHKW 444
              ST  +    +R+ P   K+     S   +N+ E     + D F   +TWVQCDACHKW
Sbjct: 534  KKSTRTR----TRKFPVGEKKVGASPSNGSTNNYEALGTTNADKFEYKDTWVQCDACHKW 589

Query: 445  RKLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTSDGKKQNV 504
            RKL + S+AD+ AAWFCSM+++P +QSC  PEE++D C+ IT L GF++K TS G+++N+
Sbjct: 590  RKLAETSIADSGAAWFCSMHTNPFYQSCSVPEESYDKCRPITNLLGFYSKETSGGEEKNI 649

Query: 505  SFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSY--AAGETQGFH 562
            SFF SVLKE+  LINS TK+ALTWL+ L P+++SEME TGL SPIL SY    G  +GFH
Sbjct: 650  SFFTSVLKENRALINSGTKRALTWLSSLMPEKISEMERTGLRSPILTSYIVPGGNVRGFH 709

Query: 563  KIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPS 622
            +IF AFGL+R++EKG  RWYYP+ L NLAFD+AALR+AL EPLD VRLYLSRATLIVVPS
Sbjct: 710  QIFDAFGLVRKMEKGTMRWYYPQNLHNLAFDVAALRIALSEPLDLVRLYLSRATLIVVPS 769

Query: 623  YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSP 682
             LVDHWKTQIQ+HVRPGQL ++VWTDH+KPSAH LAWDYDV+ITTF+RLSAEWG RK+S 
Sbjct: 770  NLVDHWKTQIQKHVRPGQLQVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPRKRSI 829

Query: 683  MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPM 742
            +MQVHW RV+LDEGHTLGSSLNLTNKLQMA+SL ++NRW+LTGTPTPNTPNSQLSHLQP+
Sbjct: 830  LMQVHWNRVILDEGHTLGSSLNLTNKLQMAVSLVSTNRWILTGTPTPNTPNSQLSHLQPL 889

Query: 743  LKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKE 802
            L+FLHEEAYGQN K+W+ GILRPFEAEMEEGR  LL LL RCMISARKTDL TIP CIK+
Sbjct: 890  LRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLNLLRRCMISARKTDLLTIPPCIKK 949

Query: 803  VTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
            V +LNFTEEHA +YNELVVTVRRNILMADWNDPSHVESLLNPKQWKFR  TI+N+RLSCC
Sbjct: 950  VKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRCATIKNIRLSCC 1009

Query: 863  VAGHIKVTDAGEDIQETMDVLVENGLDP 890
            VAGHIKV +AGEDIQETMD+LV++GLDP
Sbjct: 1010 VAGHIKVAEAGEDIQETMDILVDDGLDP 1037


>gi|414878663|tpg|DAA55794.1| TPA: hypothetical protein ZEAMMB73_989043 [Zea mays]
          Length = 1003

 Score = 1068 bits (2761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/1057 (53%), Positives = 702/1057 (66%), Gaps = 152/1057 (14%)

Query: 69   CDWEKRKSVL-LDGGECFKDGCD-SSIWNISDCHVLDWKPDS------------------ 108
            C+W+ RK++L  D        CD  S+W  +DCHVLD +                     
Sbjct: 2    CNWDARKALLDFDWASHDNTHCDDQSVWRCTDCHVLDCEDHKIASISNKEKSFDLHEIFK 61

Query: 109  -------------SRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAATCRHLRCL 155
                         +R+ P++ +   GI  + DD++  +L  L P DLVR+AATC HLR L
Sbjct: 62   TLPGVRMEKNMQVARITPDERALELGIWSVPDDVLHKVLILLKPRDLVRVAATCHHLRTL 121

Query: 156  AASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIAT 215
            AA++MPCMKLKLFPHQ+AAVEWML RE N  VL HPLY D  TEDGF FY+N +S +I+T
Sbjct: 122  AATVMPCMKLKLFPHQEAAVEWMLKREQNVHVLAHPLYKDFCTEDGFPFYINVISAEIST 181

Query: 216  GTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHNGDPRCGYY 275
            G APT+ DF GG+FCDEPGLGKT+T LSLILKT GT+A PP GV + WC H  D +CGYY
Sbjct: 182  GDAPTINDFCGGLFCDEPGLGKTVTTLSLILKTHGTMAYPPQGVDVSWCMHKPDKKCGYY 241

Query: 276  DL-SGDKLTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPL---LKRARLVDPGD-- 329
            +L        N+  + K+   ++       +      DD  C      KR RL+ P    
Sbjct: 242  ELSPSFSSNRNSSSVSKKLLGEDV------IADCPSPDDSVCSTRSSRKRGRLLSPDPTK 295

Query: 330  -----EIEGFSSFSDVDMISPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICNDR 384
                  IE   S S+   + P+     PA H+++ T+N  QV+KN    Y + S      
Sbjct: 296  VMLHAAIENSPSSSN-SKVQPM-----PAMHILKFTKNSRQVRKNPMDAYSDVS------ 343

Query: 385  NAKGNSTAKKRANSSRQVPKRNQVGLSYVVSNSCERPEKVSTDHFACNETWVQCDACHKW 444
               GN   K++ +++ +V                             +ETWVQCDAC KW
Sbjct: 344  --VGN---KRKIDTTSEV-----------------------------SETWVQCDACRKW 369

Query: 445  RKLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTSDGKKQNV 504
            R++ D +V D+T  WFC+MN DPT Q C  PEE+WD  + ITYLPGF+ K +  G ++NV
Sbjct: 370  RRVSDGTVLDSTTVWFCTMNPDPTRQKCTAPEESWDFKRKITYLPGFYKKNSLPGNEENV 429

Query: 505  SFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSYA--AGETQGFH 562
            SFF ++LK++  +INS TKKAL WLAKLSP +L EME  GL  P+L + A        ++
Sbjct: 430  SFFTNILKDYVTMINSETKKALLWLAKLSPTKLLEMEFVGLTRPVLDTRATTGKGAHPYY 489

Query: 563  KIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPS 622
            KIFQAFGL+R++EKG+TRWYYP  LD+LAFD AAL  AL  PLDS R YLS ATLIVVP+
Sbjct: 490  KIFQAFGLVRKIEKGMTRWYYPSMLDDLAFDSAALGAALENPLDSTRFYLSTATLIVVPA 549

Query: 623  YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSP 682
             L+DHW TQIQ+HV    L++FVW DHKKPSAH+LAWDYD+VITTF+RLSAEWG +K+SP
Sbjct: 550  NLIDHWTTQIQRHVSSDTLNVFVWGDHKKPSAHNLAWDYDIVITTFSRLSAEWGPQKRSP 609

Query: 683  MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPM 742
            + Q+HW RV+LDEGHTLGSSL LTNKLQMA++L ASNRW+LTGTPTPNTP SQ++HL  M
Sbjct: 610  LKQIHWFRVILDEGHTLGSSLALTNKLQMAVALVASNRWILTGTPTPNTPTSQVAHLHLM 669

Query: 743  LKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKE 802
            LKFLH+E YGQN ++WD GI RPFEA+MEEGR RL+QLL R MISARK DL+TIP CIK+
Sbjct: 670  LKFLHDETYGQNYQSWDSGIHRPFEAQMEEGRVRLVQLLQRTMISARKADLKTIPPCIKK 729

Query: 803  VTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
            +TFL+F E HA +YNELVVT+RRNILMADWNDPSHVESLLNPKQWKFR+ T++N+RLSCC
Sbjct: 730  ITFLDFNEGHAKSYNELVVTIRRNILMADWNDPSHVESLLNPKQWKFRAATLKNVRLSCC 789

Query: 863  VAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL------------- 909
            VAGHIKV +AG+DIQETMD LV+ GLDP S EY  I+Y+LLNG +C              
Sbjct: 790  VAGHIKVAEAGQDIQETMDELVQQGLDPSSDEYQLIRYSLLNGASCFRCSVWCRLPVITP 849

Query: 910  -RHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ- 967
             RH+LCLDCVA+DSEKC+LPGCG+ YEMQSPE   RPENPNPKWPVP+DLIELQPSY+Q 
Sbjct: 850  CRHLLCLDCVALDSEKCTLPGCGYHYEMQSPETRARPENPNPKWPVPKDLIELQPSYKQD 909

Query: 968  -----WSNTNT----FLKQDL-------------------------YRPNLESNKALPDK 993
                 W +T++    ++ + L                         Y+P     +A+ DK
Sbjct: 910  DWDPDWQSTSSSKVAYMIEKLRSLREAHMNHGNNITNSVGHSNTLSYQP-----QAMLDK 964

Query: 994  VIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNK 1030
            VIIFSQFLEHIHVIEQQLT+AGI ++GMYSPM  ++K
Sbjct: 965  VIIFSQFLEHIHVIEQQLTIAGIIYSGMYSPMPLASK 1001


>gi|302802608|ref|XP_002983058.1| hypothetical protein SELMODRAFT_155610 [Selaginella moellendorffii]
 gi|300149211|gb|EFJ15867.1| hypothetical protein SELMODRAFT_155610 [Selaginella moellendorffii]
          Length = 1114

 Score = 1053 bits (2724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 572/1209 (47%), Positives = 752/1209 (62%), Gaps = 168/1209 (13%)

Query: 16   LKIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIAGSLFRHVSCDWEKRK 75
            LK   RV++V + +    RA VL+D++ P+  +      K G+ +     H+SCDW +RK
Sbjct: 4    LKFRGRVVKV-VEKGAVVRAVVLIDVFFPLRHFITLSSWKGGSASAFAMGHLSCDWSRRK 62

Query: 76   SVLLDGGECFKDGCDSSIWNISDCHVLDWKPDSS---RVK-------------------- 112
               L+      D  D  +WN+S+CHV+     SS    VK                    
Sbjct: 63   E--LEASSSSID--DGDVWNLSECHVVGCSLHSSVSTSVKNTRFSLHEIFNSLSAGDAGR 118

Query: 113  -----------PEDNSCSTGISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMP 161
                        ED  CS G+ D+ D+I+ S+ +RL P DL+ IAA CRH R L   I+P
Sbjct: 119  RFVGTSLVCACDEDRRCS-GLWDLPDEILTSVFSRLLPRDLLSIAAVCRHTRELTRFIVP 177

Query: 162  CMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTM 221
            CM L+LFPHQ AAV+WMLHRE N +  R+P++ DL TEDGF+ ++N+V+G+I+    P +
Sbjct: 178  CMNLRLFPHQNAAVQWMLHRETNPQRFRNPIHKDLQTEDGFHLFLNSVTGEISI-EMPEL 236

Query: 222  RDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHNGDPRCGYYDLSGDK 281
             DF GG+FCDEPGLGKTITALSL+LK+QG    PP G ++ W +     + GYY+ +   
Sbjct: 237  SDFRGGLFCDEPGLGKTITALSLVLKSQGIFPSPPPGAEVCWSSSLSGEKIGYYEATSGT 296

Query: 282  LTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPLLKRARLVDPGDEIEGFSSFSDVD 341
                 M L KR  +   RR QL  G  TP                   E     + +D  
Sbjct: 297  ---QRMSLLKRCMAMKGRRYQL--GAETP------------------SEFGKRKAAADDS 333

Query: 342  MISPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICNDRNAKGNSTAKKRANSSRQ 401
            ++ PL                  ++++ L  +Y + S    D    G+            
Sbjct: 334  ILEPL------------------RIRRKLLDSYGDGS----DEAGVGD------------ 359

Query: 402  VPKRNQVGLSYVVSNSCERPEKVSTDHFACNETWVQCDACHKWRKLLDA--SVADATAAW 459
                  +G +  VS   ++PE         ++ WVQCD C KWRKL +   S  D +A W
Sbjct: 360  ------IGAAAAVS---QQPE-------VADDVWVQCDGCKKWRKLANGCGSPKDGSA-W 402

Query: 460  FCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTSDGKKQNVSFFISVLKEHYLLIN 519
            FC MN +P +QSC  PEE+WD   SI++L GFH KG+  G ++NVSFF S+LK+   L+N
Sbjct: 403  FCKMNRNPQYQSCSAPEESWDRKDSISHLEGFHRKGSEPGLERNVSFFFSILKDRAALLN 462

Query: 520  SMTKKALTWLAKLSPDELSEMETTGLASPI---LGSYAAGETQGFHKIFQAFGLI-RRVE 575
            S  KKAL WLA L   EL++M ++G+  P    + S        + + F AFGL+ ++ +
Sbjct: 463  SEAKKALNWLADLRSLELTKMASSGIPVPQHLRMVSVTGRTDHEYEEFFLAFGLVPKQDK 522

Query: 576  KGITRWYYPKTLDNLAFDLAALRLALCEPLDSV-RLYLSRATLIVVPSYLVDHWKTQIQQ 634
            K + +W YP+ L     D  AL+ AL +P++ V R+YLS+ATLIVVPS LV+HWKTQIQ+
Sbjct: 523  KKVPKWQYPEGLTGFHLDTLALKCALAKPVEEVTRVYLSKATLIVVPSNLVEHWKTQIQR 582

Query: 635  HVRPGQLHLFVWTDHKK-PSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVML 693
            H    QL ++   D K  P++HSLAWDYD+VITTFNRLS EW  R+ S +MQ+HW R++L
Sbjct: 583  HTSEKQLRVYACLDSKNTPTSHSLAWDYDIVITTFNRLSIEWNSRESSLLMQIHWFRIIL 642

Query: 694  DEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQ 753
            DEGHTLG+S +LTNKLQMA+++ AS RW+LTGTPTP+TP SQL +L PML+FLH+E YG 
Sbjct: 643  DEGHTLGASFSLTNKLQMAVNMRASCRWVLTGTPTPDTPYSQLVNLHPMLRFLHDELYGS 702

Query: 754  NQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHA 813
              K WD  +LRPFEA +EEGR RL+  L RCMISARK DL +IP C+++V  + FT+ HA
Sbjct: 703  QIKLWDAAVLRPFEAHLEEGRLRLVDFLRRCMISARKADLSSIPPCVRKVKLVEFTDNHA 762

Query: 814  GTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAG 873
             +YNELV TVRRN+LMADWNDP HVESLLNPKQWK ++TT+RN+RLSCCVAGHIKV +A 
Sbjct: 763  ASYNELVETVRRNLLMADWNDPDHVESLLNPKQWKLKNTTLRNVRLSCCVAGHIKVRNAN 822

Query: 874  EDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLR--------------HILCLDCVA 919
            +DIQETM++LV++G+DP S +Y FIK +LL GGNC R              H LCL CV+
Sbjct: 823  QDIQETMEMLVQDGMDPTSDQYGFIKGSLLLGGNCFRCGEWCRLPILTPCLHFLCLSCVS 882

Query: 920  MDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ------WSNTN- 972
            +D E+C LP CG  Y+MQ+P+   RPENPNPKWPVPQDLIELQPSY Q      W  T+ 
Sbjct: 883  LDCERCILPECGKPYQMQTPK--ARPENPNPKWPVPQDLIELQPSYIQEDWHSEWQATSS 940

Query: 973  ---TFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSN 1029
               ++L + L R   + N  LP+K I+FSQFLEHI  IE QLT  GI+ AGMYSPM +++
Sbjct: 941  SKVSYLVERL-RGLQQENGKLPEKAIVFSQFLEHISAIEMQLTKGGIEHAGMYSPMPAAS 999

Query: 1030 KIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGAT 1089
            K+KSL  F+ +  C+ LLMD S++LGLDLSFVT VFLMEPIWDRS+EEQV+SRAHRMGAT
Sbjct: 1000 KMKSLRTFQENPKCVVLLMDSSSALGLDLSFVTHVFLMEPIWDRSIEEQVVSRAHRMGAT 1059

Query: 1090 RPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLS 1149
            RP+ VETLAM GT+EEQML FLQ   RC             + +R H   HD AE  YL+
Sbjct: 1060 RPVLVETLAMAGTIEEQMLGFLQ---RC------------SDPSRGH---HDPAELQYLT 1101

Query: 1150 HLSFVRTNS 1158
             L+FVR ++
Sbjct: 1102 RLAFVRKHA 1110


>gi|296090335|emb|CBI40154.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  951 bits (2459), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/657 (72%), Positives = 516/657 (78%), Gaps = 90/657 (13%)

Query: 555  AGETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSR 614
            +G   GFHKIFQAFGL+RRVEKG +RWYYP+ L+NL FDL ALR+ALCEPLDS RLYLSR
Sbjct: 506  SGGDHGFHKIFQAFGLVRRVEKGTSRWYYPENLENLVFDLPALRIALCEPLDSFRLYLSR 565

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            ATL                       L ++VWTDHKKP AH+LAWDYDVVITTFNRLSAE
Sbjct: 566  ATL-----------------------LRVYVWTDHKKPCAHNLAWDYDVVITTFNRLSAE 602

Query: 675  WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
            W   K+S +MQVHWLRVMLDEGHTLGSSLNLTNKLQMA+SL ASNRWLLTGTPTPNTPNS
Sbjct: 603  WRPHKRSVLMQVHWLRVMLDEGHTLGSSLNLTNKLQMAVSLIASNRWLLTGTPTPNTPNS 662

Query: 735  QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ 794
            QLSHLQPMLKFLHEE YGQNQK+W+ GILRPFEAEMEEGRSRLL LLHRCMISARK DLQ
Sbjct: 663  QLSHLQPMLKFLHEEGYGQNQKSWEDGILRPFEAEMEEGRSRLLLLLHRCMISARKADLQ 722

Query: 795  TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTI 854
            TIP CIK+VTFLNFTEEHA +YNELVVTVRRNILMADWNDPSHVESLLNPKQWKFR +TI
Sbjct: 723  TIPPCIKKVTFLNFTEEHAKSYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRISTI 782

Query: 855  RNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL----- 909
            +N+RLSCCVAGHIKVTDAGEDIQETMD+LVENGLD +S EYAFIKYNLL GG C+     
Sbjct: 783  KNVRLSCCVAGHIKVTDAGEDIQETMDILVENGLDTISDEYAFIKYNLLYGGACMRCKEW 842

Query: 910  ---------RHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIE 960
                     RH+LCLDCVA+DSEKC+ PGCG LYEMQSPEILTRPENPNPKWPVP+DLIE
Sbjct: 843  CRLPVITPCRHLLCLDCVALDSEKCTFPGCGNLYEMQSPEILTRPENPNPKWPVPKDLIE 902

Query: 961  LQPSYRQ--W-------------------------------------------------- 968
            LQPSY+Q  W                                                  
Sbjct: 903  LQPSYKQDTWDPDWQSTSSSKVTYIVKRLKALQEANRKSGYAMDEDSDIKDIDELVSLSE 962

Query: 969  -SNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHS 1027
             +N N  L+QD  R N E++   P+KV+IFSQFLEHIHVIEQQLTVAGIKF+GMYSPMHS
Sbjct: 963  QNNCNALLQQDYTRLNDETSHISPEKVLIFSQFLEHIHVIEQQLTVAGIKFSGMYSPMHS 1022

Query: 1028 SNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMG 1087
            SNK+KSL  F+HDA C+ALLMDGSA+LGLDLSFVT VFLMEPIWDRSMEEQVISRAHRMG
Sbjct: 1023 SNKMKSLSTFQHDADCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMG 1082

Query: 1088 ATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAE 1144
            ATRPI VETLAMRGT+EEQMLEFLQD D CRR LKEE  KP  EG R+HR+LHDFAE
Sbjct: 1083 ATRPIRVETLAMRGTIEEQMLEFLQDADECRRFLKEEFGKPYSEGVRAHRSLHDFAE 1139



 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/505 (50%), Positives = 309/505 (61%), Gaps = 127/505 (25%)

Query: 1   MSVVHQLQSLVNQKCLKIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIA 60
           +SVV Q+ +LV  KC+KI ARV+RV     G ARA VLVD+YLPI  WSGWQFP+S + A
Sbjct: 87  ISVVRQIHALVVHKCVKIVARVVRV----CGEARAVVLVDVYLPIELWSGWQFPRSASTA 142

Query: 61  GSLFRHVSCDWEKRKSVLLDGGECFK--DGCDSSIWNISDCHVLDWK------------- 105
           G+LFRH+SCDWE+R SVL++  E +K  DG + S+WN+SDCHVL  K             
Sbjct: 143 GALFRHLSCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDCHVLGCKLHCNALDPSKKKL 202

Query: 106 ------------------PDSSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAA 147
                             PDSSRVKP D SC +GI +++DD++I+ILT L P+DLVR++A
Sbjct: 203 FELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWEVSDDVLINILTALAPMDLVRVSA 262

Query: 148 TCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVN 207
           TC HLR LAASIMPCMKLKLFPHQ AAVEWML RE NAE+L HPL+ID  TEDGF FY+N
Sbjct: 263 TCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRERNAEILPHPLFIDFLTEDGFAFYIN 322

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHN 267
           TV+G+I TG  P +RDF GGMFCDEPGLGKTITALSLILKTQGT ADPPDGV++IWCTHN
Sbjct: 323 TVTGEIVTGMPPLIRDFRGGMFCDEPGLGKTITALSLILKTQGTWADPPDGVQVIWCTHN 382

Query: 268 GDPRCGYYDLSGDKLTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPLLKRARLVDP 327
            D RCGYY+L+ D +   + C GK                          ++K       
Sbjct: 383 SDQRCGYYELTSDNVRSTDSCPGK--------------------------VIK------- 409

Query: 328 GDEIEGFSSFSDVDMISPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICNDRNAK 387
                           SP    S PAT +VRCTR+L +VK+NL + Y+E S         
Sbjct: 410 ----------------SPTTVRSMPATRVVRCTRSLSRVKRNLVYAYEEASG-------- 445

Query: 388 GNSTAKKRANSSRQVPKRNQVGLSYVVSNSCERPEKVSTDHFACNETWVQCDACHKWRKL 447
                                             EK S DH  CNETW+QCDACHKWR+L
Sbjct: 446 ---------------------------------SEKDSEDHSECNETWIQCDACHKWRRL 472

Query: 448 LDASVADATAAWFCSMNSDPTHQSC 472
            + SVADA AAWFCSMNSDP++QSC
Sbjct: 473 GEPSVADAAAAWFCSMNSDPSYQSC 497


>gi|302764302|ref|XP_002965572.1| hypothetical protein SELMODRAFT_143427 [Selaginella moellendorffii]
 gi|300166386|gb|EFJ32992.1| hypothetical protein SELMODRAFT_143427 [Selaginella moellendorffii]
          Length = 1112

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/758 (56%), Positives = 540/758 (71%), Gaps = 54/758 (7%)

Query: 432  NETWVQCDACHKWRKLLDA--SVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLP 489
            ++ WVQCD C KWRKL     S  D +A WFC MN +P +QSC  PEE+WD   SI++L 
Sbjct: 374  DDVWVQCDGCKKWRKLAHGCGSPQDGSA-WFCKMNRNPQYQSCSAPEESWDGKDSISHLE 432

Query: 490  GFHAKGTSDGKKQNVSFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPI 549
            GFH KG+  G ++NVSFF S+LK+   L+NS  KKAL WLA L   EL++M ++G+  P 
Sbjct: 433  GFHRKGSEAGLERNVSFFFSILKDRAALLNSEAKKALNWLADLRSLELTKMASSGIPVPQ 492

Query: 550  ---LGSYAAGETQGFHKIFQAFGLI-RRVEKGITRWYYPKTLDNLAFDLAALRLALCEPL 605
               + S        + + F AFGL+ ++ +K + +W YP+ L     D  AL+ AL +P+
Sbjct: 493  HLRMVSVTGRTEHEYEEFFLAFGLVPKQDKKKVPKWQYPEGLTGFHLDTLALKCALSKPV 552

Query: 606  DSV-RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK-PSAHSLAWDYDV 663
            + V R+YLS+ATLIVVPS LV+HWKTQIQ+H    QL ++   D K  P++HSLAWDYD+
Sbjct: 553  EEVTRVYLSKATLIVVPSNLVEHWKTQIQRHTSDKQLRVYACLDSKNAPTSHSLAWDYDI 612

Query: 664  VITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
            VITTFNRLS EW  R+ S +MQ+HW R++LDEGHTLG+S +LTNKLQMA+++ AS RW+L
Sbjct: 613  VITTFNRLSIEWNSRESSLLMQIHWFRIILDEGHTLGASFSLTNKLQMAVNMRASCRWVL 672

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTPTP+TP SQL +L PML+FLH+E YG   K WD  +LRPFEA +EEGR RL+  L R
Sbjct: 673  TGTPTPDTPYSQLVNLHPMLRFLHDELYGSQIKLWDAAVLRPFEAHLEEGRLRLVDFLRR 732

Query: 784  CMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLN 843
            CMISARK DL +IP C+++V  + FT+ HA +YNELV TVRRN+LMADWNDP HVESLLN
Sbjct: 733  CMISARKADLSSIPPCVRKVKLVEFTDNHAASYNELVETVRRNLLMADWNDPDHVESLLN 792

Query: 844  PKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLL 903
            PKQWK ++TT+RN+RLSCCVAGHIKV +A +DIQETM++LV++G+DP S +Y FIK +LL
Sbjct: 793  PKQWKLKNTTLRNVRLSCCVAGHIKVRNANQDIQETMEMLVQDGMDPTSDQYGFIKGSLL 852

Query: 904  NGGNCLR--------------HILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPN 949
             GGNC R              H LCL CV++D E+C LP CG  Y+MQ+P+   RPENPN
Sbjct: 853  LGGNCFRCGEWCRLPILTPCLHFLCLSCVSLDCERCILPECGKPYQMQTPK--ARPENPN 910

Query: 950  PKWPVPQDLIELQPSYRQ------WSNTN----TFLKQDLYRPNLESNKALPDKVIIFSQ 999
            PKWPVPQDLIELQPSY Q      W  T+    ++L + L R   + N  LP+K I+FSQ
Sbjct: 911  PKWPVPQDLIELQPSYIQEDWHSEWQATSSSKVSYLVERL-RGLQQENGKLPEKAIVFSQ 969

Query: 1000 FLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLS 1059
            FLEHI  IE QLT  GI+ AGMYSPM +++K+KSL  F+ +  C+ LLMD S++LGLDLS
Sbjct: 970  FLEHISAIEMQLTKGGIEHAGMYSPMPAASKMKSLRTFQENPKCVVLLMDSSSALGLDLS 1029

Query: 1060 FVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRR 1119
            FVT VFLMEPIWDRS+EEQV+SRAHRMGATRP+ VETLAM GT+EEQML FLQ   RC  
Sbjct: 1030 FVTHVFLMEPIWDRSIEEQVVSRAHRMGATRPVLVETLAMAGTIEEQMLGFLQ---RC-- 1084

Query: 1120 LLKEELVKPEREGARSHRTLHDFAESNYLSHLSFVRTN 1157
                       + +R H   HD AE  YL+ L+FVR +
Sbjct: 1085 ----------SDPSRGH---HDPAELQYLTRLAFVRKH 1109



 Score =  231 bits (589), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/355 (38%), Positives = 190/355 (53%), Gaps = 56/355 (15%)

Query: 16  LKIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIAGSLFRHVSCDWEKRK 75
           LK   RV++V + +    RA VL+D++ P+  +      K G+ +     H+SCDW +RK
Sbjct: 4   LKFRGRVVKV-VQKGAVVRAVVLIDVFFPLRHFITLSSWKGGSASAFAMGHLSCDWSRRK 62

Query: 76  SVLLDGGECFKDGCDSSIWNISDCHVLDWKPDSS---RVK-------------------- 112
              L+      D  D  +WN+S+CHV+     SS    VK                    
Sbjct: 63  E--LEASSSSID--DRDVWNLSECHVVGCSLHSSVSTSVKNTRFSLHEIFNSLSAGDAGR 118

Query: 113 -----------PEDNSCSTGISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMP 161
                       ED  CS G+ D+ D+I+ S+ +RL P DL+ IAA CRH R L   I+P
Sbjct: 119 RFVGTSLVCAGDEDRRCS-GLWDLPDEILTSVFSRLLPRDLLSIAAVCRHTRELTRFIVP 177

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTM 221
           CM L+LFPHQ AAV+WMLHRE N +  R+P++ DL TEDGF+ ++N+V+G+I+    P +
Sbjct: 178 CMNLRLFPHQNAAVQWMLHRETNPQRFRNPIHKDLQTEDGFHLFLNSVTGEISI-EMPEL 236

Query: 222 RDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHNGDPRCGYYDLSGDK 281
            DF GG+FCDEPGLGKTITALSL+LK+QG    PP G ++ W +     + GYY+ +   
Sbjct: 237 SDFRGGLFCDEPGLGKTITALSLVLKSQGIFPSPPPGAEVCWSSSLSGEKIGYYEATSGT 296

Query: 282 LTCNNMCLGKRTFSQNARRRQLSVGKFTPM----------DDLKCPLLKRARLVD 326
                M L KR  +   RR QL  G  TP           D +  PL  R +L+D
Sbjct: 297 ---QRMSLLKRCMAMKGRRYQL--GAETPSEFGKRKAAADDSILEPLRIRRKLLD 346


>gi|168004101|ref|XP_001754750.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
 gi|162693854|gb|EDQ80204.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
          Length = 1128

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/743 (55%), Positives = 513/743 (69%), Gaps = 85/743 (11%)

Query: 432  NETWVQCDACHKWRKLLDASVA-DATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPG 490
            N TWVQC+AC KWRKL +  V  +   AWFCS+N D  +Q+C  P+E   +  S+  LPG
Sbjct: 404  NFTWVQCEACSKWRKLPNGVVPPEGNVAWFCSLNPDSLYQNCTVPQEIEADA-SVKSLPG 462

Query: 491  FHAKGTSDGKKQNVSFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASP-- 548
            F+  GT  G+ QNV+FF SVLK +  L +   ++ + WLA L+P++ +++ T GLA P  
Sbjct: 463  FYKDGTIPGQPQNVAFFASVLKTNAHLYDECARRPVIWLASLNPEKSAKLATVGLAIPRE 522

Query: 549  ILGSYAAGETQGFHKIFQAFGLIRRVE-KGITRWYYPKTLDNLAFDLAALRLALCEPLD- 606
              G  + GE      +F+ FGL ++ + KG  +W YPK LD L FD  AL  A  +P D 
Sbjct: 523  ARGEGSLGENSSCDTLFKLFGLEQKKQNKGAVKWSYPKGLDGLLFDTKALGEAARKPKDD 582

Query: 607  SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA-HSLAWDYDVVI 665
            + RLYLSRATLI                      L ++VWTDHKKP+A H+LAWDYD+VI
Sbjct: 583  ATRLYLSRATLI----------------------LRVYVWTDHKKPAAAHTLAWDYDIVI 620

Query: 666  TTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTG 725
            TTF+RLS+EW  R+ S +M++HWLR+MLDEGHTLG+SL+LTNKLQMA SL AS RW+LTG
Sbjct: 621  TTFHRLSSEWSIRENSVLMRIHWLRIMLDEGHTLGASLSLTNKLQMAKSLHASRRWILTG 680

Query: 726  TPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCM 785
            TPTPNTP+SQ ++L+PML+FLHE  Y ++QK WD  ILRPFEA  EEGR RL+QLLHR M
Sbjct: 681  TPTPNTPSSQAAYLRPMLEFLHENIYSKHQKLWDNAILRPFEAGCEEGRFRLVQLLHRTM 740

Query: 786  ISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPK 845
            IS+RK DL TIP CI++VT LNFTE HA +YNELVVTV+RNIL+ADW DPSHVESLLNPK
Sbjct: 741  ISSRKADLCTIPPCIRKVTLLNFTEAHAASYNELVVTVQRNILLADWRDPSHVESLLNPK 800

Query: 846  QWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVEN-GLDPLSQEYAFIKYNLLN 904
            QWKFRS+T+RN RLSCCVAGHIKV   G D+ ETMD+LV + GL   S  Y  I+  L++
Sbjct: 801  QWKFRSSTLRNTRLSCCVAGHIKVRIVGNDVDETMDLLVADYGLVHASDLYYKIRTALIH 860

Query: 905  GGNCLR--------------HILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNP 950
            GGNC R              H+LC+ CVA+D+EKC+L GCG  Y+MQSP  L RPENP P
Sbjct: 861  GGNCDRCQVWCKLPIVTPCCHLLCMSCVALDNEKCTLFGCGHPYKMQSPAELARPENPTP 920

Query: 951  KWPVPQDLIELQPSYRQ------WSNTNT----FLKQDL----------YRPNLESNKAL 990
            KWPVPQDLIELQPSY Q      W  T++    +L   L          + P+  ++K +
Sbjct: 921  KWPVPQDLIELQPSYAQDDWDPDWHATSSSKVAYLVNQLKVIQDNNLMQHYPSDTTSKTM 980

Query: 991  PD---------------------KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSN 1029
            PD                     K I+FSQFLEHI+VIE+QL  AGI+  G+YSPMHS N
Sbjct: 981  PDELKSMIWQTSSRNLSTSSLPCKAIVFSQFLEHINVIEEQLNGAGIQHVGIYSPMHSMN 1040

Query: 1030 KIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGAT 1089
            K+KSL  FR D  C  L+MDG+A+LGLDLSFVT V+LMEPIWD S+EEQV+SRAHRMGAT
Sbjct: 1041 KMKSLATFRKDPGCTVLVMDGTAALGLDLSFVTHVYLMEPIWDGSVEEQVVSRAHRMGAT 1100

Query: 1090 RPIHVETLAMRGTVEEQMLEFLQ 1112
            RP+ VETLAMRGT+E+QMLE+LQ
Sbjct: 1101 RPVLVETLAMRGTIEQQMLEYLQ 1123



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/317 (39%), Positives = 175/317 (55%), Gaps = 34/317 (10%)

Query: 17  KIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIAGSLFRHVSCDWEKRKS 76
           ++  RV+ +   +    R   ++D+YLP +AW G  F KSGA A +   H+SCDWE+R++
Sbjct: 7   RVHGRVLTIA-HKGDETRVLAMLDLYLPPSAWMGAVFWKSGAAAAAALSHLSCDWEERRA 65

Query: 77  VLLDGGECFKDGCDSSIWNISDCHVL------------------------------DWKP 106
           +L+      +     ++W    CHVL                              D +P
Sbjct: 66  LLMKLSLREEIVMSDNVWEQGGCHVLGCKVHQVLSKSMKAQFDLHSLFKSLPSYKTDDRP 125

Query: 107 DSSRVKPEDN--SCSTGISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPCMK 164
           D  ++  ++      +G+ D+ D+I+ SIL RL P DL  +AA CR+ R +A  I+PCM 
Sbjct: 126 DGLKLLRDETVEGQQSGLWDVPDEIITSILNRLLPKDLHNVAAVCRYTRLMAVPIIPCMH 185

Query: 165 LKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDF 224
           L+LFPHQQAAV WML RE    VL HPL   L TEDGF FY++TVSG+++    P + DF
Sbjct: 186 LRLFPHQQAAVRWMLQRENRPGVLEHPLCKKLETEDGFPFYLDTVSGELSPEKPPEVHDF 245

Query: 225 HGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHNGDPRCGYYDLSGDKLTC 284
            GG+FCDEPGLGKT+TALSLILKTQG  AD P   ++ W       R GYY+++      
Sbjct: 246 RGGLFCDEPGLGKTVTALSLILKTQGMTADAPANTEVFWVPQRPGERMGYYEVNASSSLL 305

Query: 285 NNMCLGKRTFSQNARRR 301
               L KR+ S   +R+
Sbjct: 306 GGSAL-KRSISIRVKRK 321


>gi|242055593|ref|XP_002456942.1| hypothetical protein SORBIDRAFT_03g046010 [Sorghum bicolor]
 gi|241928917|gb|EES02062.1| hypothetical protein SORBIDRAFT_03g046010 [Sorghum bicolor]
          Length = 1175

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/525 (66%), Positives = 418/525 (79%), Gaps = 40/525 (7%)

Query: 670  RLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP 729
            RLSAEWG +K+SP+ Q+HW RV+LDEGHTLGSSL LTNKLQMA++L ASNRW+LTGTPTP
Sbjct: 651  RLSAEWGPKKRSPLKQIHWFRVILDEGHTLGSSLALTNKLQMAVALVASNRWILTGTPTP 710

Query: 730  NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISAR 789
            NTP SQ++HL PMLKFLH+E YG+N ++WD GI RPFEA+MEEGR+RL+QLL R MISAR
Sbjct: 711  NTPTSQVAHLHPMLKFLHDETYGENYQSWDSGIHRPFEAQMEEGRARLVQLLQRTMISAR 770

Query: 790  KTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKF 849
            K DL+ IP CIK++T+L+F E HA +YNELVVT+RRNILMADWNDPSHVESLLNPKQWKF
Sbjct: 771  KADLKNIPPCIKKITYLDFNEGHAKSYNELVVTIRRNILMADWNDPSHVESLLNPKQWKF 830

Query: 850  RSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL 909
            R+TT++N+RLSCCVAGHI+V +AG+DIQETMD LV++GLDP S EY FI+Y+LLNG +C 
Sbjct: 831  RATTLKNVRLSCCVAGHIRVAEAGQDIQETMDELVQHGLDPSSDEYQFIRYSLLNGASCF 890

Query: 910  --------------RHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVP 955
                          RH+LCLDCVA+DSEKC+LPGCG  YEMQSPE   RPENPNPKWPVP
Sbjct: 891  RCRVWCRLPVITPCRHLLCLDCVALDSEKCTLPGCGNHYEMQSPETRARPENPNPKWPVP 950

Query: 956  QDLIELQPSYRQ------WSNTNT----FLKQDLYRPNLESN----------------KA 989
            +DLIELQPSY+Q      W +T++    +L + L       N                +A
Sbjct: 951  KDLIELQPSYKQDDWDPDWQSTSSSKVAYLIEKLRSLRETGNNITDSVGHANTLSYQPQA 1010

Query: 990  LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            + DKVIIFSQFLEHIHVI+QQLT+AGI +AGMYSPM  ++K  +L  F+ D +C+AL+MD
Sbjct: 1011 VLDKVIIFSQFLEHIHVIQQQLTIAGIIYAGMYSPMPLASKRSALMKFQEDPTCMALVMD 1070

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            G+A+LGLDLSFVT VFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 
Sbjct: 1071 GTAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLR 1130

Query: 1110 FLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLSHLSFV 1154
             LQD+  CR+++ +     + EG RSHR+LHDFAES+YL  LS V
Sbjct: 1131 LLQDSSACRKIVNKGTGSTDNEGGRSHRSLHDFAESSYLLQLSSV 1175



 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 275/628 (43%), Positives = 374/628 (59%), Gaps = 96/628 (15%)

Query: 3   VVHQLQSLVNQKCLKIEARVMRV---EIGE---NGA---ARAAVLVDIYLPIAAWSGWQF 53
           VV  L++LV  +C+++E  ++RV   + GE   +GA   ARA +L+D+YLP+AAWSGWQF
Sbjct: 68  VVRLLRTLVANRCVEVEGTLLRVVTRKAGEGDGDGAEVEARAVLLLDVYLPVAAWSGWQF 127

Query: 54  PKSGAIAGSLFRHVSCDWEKRKSVL-LDGGECFKDGCDS-SIWNISDCHVL---DWKPDS 108
           P+S + A ++F+HVSC+W+ RK++L  D        CD  SIW+ +DCHVL   D K  S
Sbjct: 128 PRSRSAAAAVFKHVSCNWDARKALLDFDWTSHANTHCDDRSIWSCTDCHVLGCEDHKIAS 187

Query: 109 ----------------------------SRVKPEDNSCSTGISDIADDIVISILTRLGPI 140
                                       +R+ P+  +   GI  + DD++  +L  L P 
Sbjct: 188 ISNKEKSFDLHEIFKMLPGVRMEKNMQVARIIPDAGALELGIWSVPDDVLHKVLILLKPR 247

Query: 141 DLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATED 200
           DL+R+AATC HLR LAAS+MPCMKLKLFPHQ+AAVEWML RE N  VL HPLY D  TED
Sbjct: 248 DLIRVAATCHHLRTLAASVMPCMKLKLFPHQEAAVEWMLKREQNVHVLAHPLYKDFCTED 307

Query: 201 GFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVK 260
           GF FY+N +S +I+TG APT+ DF GGMFCDEPGLGKT+T LSLILKTQGT+A  P GV 
Sbjct: 308 GFPFYINVISAEISTGDAPTINDFCGGMFCDEPGLGKTVTTLSLILKTQGTMAYAPQGVD 367

Query: 261 IIWCTHNGDPRCGYYDL--SGDKLTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPL 318
           + WC H  D +CGYY+L  S      ++    ++   ++       +  +   DD  C  
Sbjct: 368 VSWCMHKPDKKCGYYELSASCSSNRNSSSSASRKLLGEDV------ITDYQSPDDSVCST 421

Query: 319 ---LKRARLVDPG-DEIEGFSSFSDVDMISPLVASSEPATHLVRCTRNLGQVKKNLFHTY 374
               KR RL+ P   ++   ++  +    S     S PATH+++ T+N  QV+KNL   Y
Sbjct: 422 RYSRKRGRLLSPDPTKVMLHAAIENSPSSSHSKEHSMPATHILKFTKNSRQVRKNLMDAY 481

Query: 375 DEESNICNDRNAKGNSTAKKRANSSRQVPKRNQVGLSYVVSNSCERPEKVSTDHFACNET 434
            + S                       V  + ++G+S  +S                 ET
Sbjct: 482 SDVS-----------------------VGNKRKIGISSELS-----------------ET 501

Query: 435 WVQCDACHKWRKLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAK 494
           WVQCDAC KWR+L D +V D+T  WFC+MN+DPT Q C DPEE+WD  + ITYLPGF+ K
Sbjct: 502 WVQCDACKKWRRLSDGTVLDSTTVWFCTMNTDPTRQKCTDPEESWDFKRKITYLPGFYKK 561

Query: 495 GTSDGKKQNVSFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSYA 554
            +  G ++NV+FF ++LK++  +INS TKKAL WLAKLSP +L EME  GL  P+L + A
Sbjct: 562 NSLPGNEENVTFFANILKDNVTMINSETKKALLWLAKLSPTKLLEMEFVGLTRPVLDTRA 621

Query: 555 AGE--TQGFHKIFQAFGLIRRVEKGITR 580
                 + ++KIFQAFGL+R++EKG+TR
Sbjct: 622 TTSKGARPYYKIFQAFGLVRKIEKGVTR 649


>gi|357456669|ref|XP_003598615.1| Chromatin remodeling complex subunit, partial [Medicago truncatula]
 gi|355487663|gb|AES68866.1| Chromatin remodeling complex subunit, partial [Medicago truncatula]
          Length = 651

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 295/574 (51%), Positives = 375/574 (65%), Gaps = 48/574 (8%)

Query: 1   MSVVHQLQSLVNQKCLKIEARVMRVEIGENGAARAAVLVDIYLPIAAWS-GWQFPKSGAI 59
            SVV+QL +LV +KCL I+A V+ V    +   R  V+VD+YLP+  WS GWQFPKSG++
Sbjct: 89  FSVVNQLHALVLRKCLDIDAHVLCVA-EVDSRVRVVVIVDVYLPVLVWSSGWQFPKSGSV 147

Query: 60  AGSLFRHVSCDWEKRKSVLLDGGECFK-DGCDSSIWNISDCHVLDWKPDSS--------- 109
           AG++FRH+SCDW +R S+L D   C K  G +  IWN+SDCHVL  K  SS         
Sbjct: 148 AGAVFRHLSCDWNERSSMLSDPDYCRKIHGENECIWNLSDCHVLGCKLHSSVSGSSRERL 207

Query: 110 ------------------------RVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRI 145
                                   ++ P DN+  +GI DI+DDI+I IL  LGP+DL R+
Sbjct: 208 FELHEIFKTVPSPCVGNQHNFNISKIIPMDNTGRSGIWDISDDILIKILYSLGPLDLNRV 267

Query: 146 AATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFY 205
           +ATC HLR LAAS++PC KL LFPHQQAAVEWML RE NAE+L HPLY+ L+T+DGF F+
Sbjct: 268 SATCHHLRSLAASVIPCTKLNLFPHQQAAVEWMLQRERNAELLPHPLYVALSTDDGFSFH 327

Query: 206 VNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCT 265
           VNTVSGDI  G  PT++DF GGMFCDEPGLGKT+TALSLI KTQGTLADPPDG  ++WC 
Sbjct: 328 VNTVSGDIVIGETPTIKDFRGGMFCDEPGLGKTVTALSLITKTQGTLADPPDGSPVVWCQ 387

Query: 266 HNGDPRCGYYDLSGDKLTCNNMCLGKRTFSQNARRRQLSVGKFTPMDDLKCPLLKRARLV 325
           H+ + +CGYY++SG+  T     +GKR  SQ++       G+     D      +RA+L+
Sbjct: 388 HSTNKKCGYYEISGNNTTGGYTIMGKRDVSQDS-------GRSNENHDFSS---ERAKLL 437

Query: 326 DPGDEI-EGFSSFSDVDMISPLVASSEPATHLVRCTRNLGQVKKNLFHTYDEESNICNDR 384
           +P  EI +   S S  +  SP  A SE  +   RCTR+L +VKKNL+ TYDEE+ I N R
Sbjct: 438 NPDQEITKPHDSCSVGEDTSPPDACSEEYSPASRCTRSLSRVKKNLYFTYDEEAMISNGR 497

Query: 385 NAKGNSTAKKRANS-SRQVPKRNQVGLSYVVSNSCERPEKVSTDHFACNETWVQCDACHK 443
                S   K A+  +  V +   V  SY    S +   K   D    ++TW+QCDACHK
Sbjct: 498 RVGKRSIKTKHASDVASHVSQNKLVDTSYGSRQSYKLHGKRKVDCLEYSDTWIQCDACHK 557

Query: 444 WRKLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFHAKGTSDGKKQN 503
           WRKL D S+A++ AAWFCSMN+DP +QSC  PE+++ N   ITYLPGFH KGT  G KQN
Sbjct: 558 WRKLADNSMANSNAAWFCSMNTDPLYQSCRVPEQSFKNSSKITYLPGFHLKGTPGGVKQN 617

Query: 504 VSFFISVLKEHYLLINSMTKKALTWLAKLSPDEL 537
           VSFF SVLKEHY L+NS TK+ALTWLA++S D+L
Sbjct: 618 VSFFTSVLKEHYSLVNSRTKEALTWLARISIDKL 651


>gi|384248313|gb|EIE21797.1| hypothetical protein COCSUDRAFT_47939 [Coccomyxa subellipsoidea
            C-169]
          Length = 1040

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 284/783 (36%), Positives = 391/783 (49%), Gaps = 126/783 (16%)

Query: 422  EKVSTDHFACNETWVQCDACHKWRKLLDASVADATAAWFCSMNSDPTHQSCGDPEEAWDN 481
            E V     A    WV+C+ C KWR +           W C+M+ DP   SC   EE    
Sbjct: 234  EGVQDAAVADESFWVKCELCKKWRAMPIGHKKPEEKRWICTMHPDPEIASCDVEEEQAHE 293

Query: 482  CQSITYLPGFHAKGTSDGKKQNVSFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEME 541
                +   G+   G   G++ NV +F  + ++H                ++ P    E E
Sbjct: 294  VTRYSEHEGYVQPGEPQGQQANVEYFQRMAEKHL---------------EIPPRTWGEPE 338

Query: 542  TTGLASPILGSYAAGETQGFHK---------IFQAFGLIRRVEKGITRWYYPKTLDNLAF 592
                 + +L      E  GF K           Q      +   G+  W  P +L+ L  
Sbjct: 339  VAQNVANML------EELGFKKESAPGKMQKGKQKGKRKGKSSSGVL-WQQPYSLELLHL 391

Query: 593  DLAALRL----ALCEPLDSV---------RLYLSRATLIVVPSYLVDHWKTQIQQH---- 635
            D AAL++    +      SV         R+YLS ATL+VVPS L+ HW  QI+ H    
Sbjct: 392  DRAALKIVADRSALGKAPSVPNGGNRKQHRIYLSSATLLVVPSTLIQHWMDQIKMHTANA 451

Query: 636  VRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDE 695
            VR   L   +  D    +A  +AW YD+VITTF RLS E    K+S + Q+HWLR++LDE
Sbjct: 452  VRVKVLDTRL--DADPLAALDIAWKYDIVITTFQRLSLEGSLGKQSALAQIHWLRIILDE 509

Query: 696  GHTLGSSLNLTNKLQMAISLTASNRWLLTGT----------------------------- 726
            GH LG+SL +T+KLQMA+SL A  RW++TGT                             
Sbjct: 510  GHMLGASLGMTSKLQMAVSLRAERRWVMTGTLAVLADPSAYFQDICCVPLMFWSCHMSRT 569

Query: 727  PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
            PTPNTP S ++HLQP+L FL  E YG  +K W+  + RPFEA   +GR RL+ LL    I
Sbjct: 570  PTPNTPTSHVAHLQPLLAFLGHEPYGTQRKIWEDAVQRPFEAHQIDGRVRLVDLLRHTTI 629

Query: 787  SARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQ 846
             A K DL T+  C ++VT L+F  EHA +YNEL+  V++N+L+ DW D  H+ESLL+ + 
Sbjct: 630  RASKEDLITMTKCFRKVTVLDFAPEHALSYNELIEVVKKNLLLGDWGDEDHIESLLSLRN 689

Query: 847  WKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVEN----GLDPLSQEYAFIKYNL 902
             K+    +RN+R+SCCVAG+  ++   ED++ET++++ E      +D  +  +    + L
Sbjct: 690  SKWGQEMLRNVRMSCCVAGNCNLSIKEEDLKETLELMSERLGHFTVDAENPPWVDADHPL 749

Query: 903  LNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEIL-TRPENPNPKWPVPQDLIEL 961
                  LR+    +C          P C   Y MQS E    R  NPNPKW VP D+IE 
Sbjct: 750  AYIEEALRNGSATEC----------PLCKEPYRMQSVEDPDRRANNPNPKWEVPIDVIEW 799

Query: 962  QPSYRQ--------------WSNTNT----FLKQDLY--------------RPNLESNKA 989
            QPSY Q              W NTN+     L Q L               R  +     
Sbjct: 800  QPSYTQEGALGISGGQWSATWQNTNSSKCMHLLQRLVSIGAAPQSKTSSDGRVGVSPEHG 859

Query: 990  LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
               K I+F+QF  H+ +IEQQLT  GI  A +   M    K ++L+ F+       LLMD
Sbjct: 860  PRTKAIVFTQFWHHLFLIEQQLTEHGIGVAVLKGKMKPDEKARALNHFKSWDGVTVLLMD 919

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             + S+GLDLSFV+ VFLMEP+ D S+E+QV++RAHRMGA   + VETL MRGTVEE+++E
Sbjct: 920  ETGSVGLDLSFVSYVFLMEPLVDASLEQQVVARAHRMGAKAIVQVETLVMRGTVEEKVIE 979

Query: 1110 FLQ 1112
              Q
Sbjct: 980  LAQ 982



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 87/156 (55%)

Query: 122 ISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHR 181
           ++ ++ DI+  ++  L   D+  ++ TCR  R + +   P ++L LFPHQ+ A+ WML R
Sbjct: 31  VAHLSADILQDVVGHLDTTDICALSCTCRLFRAVCSEAAPFLRLSLFPHQRCALRWMLER 90

Query: 182 EWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITA 241
           E  A +L +P +    T+DG   +    SG I     P +RD  GG FCDEPGLGKTITA
Sbjct: 91  EKEAGLLPNPTWRPFPTKDGVPLWGCAASGGIRIEAPPDVRDLRGGFFCDEPGLGKTITA 150

Query: 242 LSLILKTQGTLADPPDGVKIIWCTHNGDPRCGYYDL 277
           L+LIL+T+G++   P    +         R  +Y +
Sbjct: 151 LALILRTKGSVPQAPVDATVTAARDKDGKRTAFYTM 186


>gi|452825247|gb|EME32245.1| SNF2 domain-containing protein [Galdieria sulphuraria]
          Length = 996

 Score =  361 bits (927), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 215/549 (39%), Positives = 306/549 (55%), Gaps = 63/549 (11%)

Query: 610  LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK---------KPSAHSLAWD 660
            +Y+SRATLIVVPS L+ HW+ Q+  H R     L    DH          +     L   
Sbjct: 390  VYISRATLIVVPSTLLLHWEEQLTLHSREKIRILVHVGDHHFRICDGRSFRSFPLQLVLH 449

Query: 661  Y-DVVITTFNRLSAEWGRRKK--SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTA 717
            Y DVV+TTF+++  E+ R K   + ++ +HW RV+LDEGH +G+SL+L     +  +L  
Sbjct: 450  YCDVVLTTFSQVQREYQRAKSNDASLLSIHWFRVILDEGHRVGASLSLNYTKMICCALRT 509

Query: 718  SNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL 777
              RW++TGTPTPNT  S ++HL P+ +FL +EA+G  +  W   I RPFEA+  EG  RL
Sbjct: 510  DRRWIMTGTPTPNTSVSDIAHLAPLYEFLRDEAFGVGKNVWLHCIQRPFEAKEFEGLDRL 569

Query: 778  LQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSH 837
              LL R M    K++++ IP        L+F+   A +YNELV  ++RN+L+AD+NDP H
Sbjct: 570  KFLLRRTMFRTLKSEVEFIPPSYISYKLLDFSPVTALSYNELVSVIQRNLLLADFNDPDH 629

Query: 838  VESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVL---VENGL-----D 889
             +SLL+PK        I N+R SCC+AGHIK++   ED+ ET+  L   ++N L     D
Sbjct: 630  TQSLLHPKNRHAARQAIDNVRKSCCIAGHIKLSVLQEDLNETLGKLQLELQNSLSSADAD 689

Query: 890  PLSQEYAFIKYNLLNGGNC------LR--------HILCLDCVAMDSEKCSLPGCGFLYE 935
             +      I+  LL GG C      +R        HILC DC +   + C L  C   Y+
Sbjct: 690  IIQSHILRIQKVLLEGGLCELCSEWIRLPIVTPCCHILCTDCASTSRKCCPLENCQRKYQ 749

Query: 936  MQSPEILTRPENPNPKWPVPQDLIELQPSYRQ------WSNTN--------TFLKQDLYR 981
            +              K  VP+DLIELQP + Q      W   +        + LKQ    
Sbjct: 750  LD-------------KKDVPEDLIELQPGFMQENWYPIWEEVDSAKVDYLLSALKQLNEE 796

Query: 982  PNLESN--KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH 1039
            P L++        KVI+FSQFLEHI +I   L   G ++  +   +    K+ +L  FRH
Sbjct: 797  PILDNGTWTRKKRKVIVFSQFLEHIFLISNILDRHGYRYCRVLGALSYQAKMNALHRFRH 856

Query: 1040 DASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAM 1099
            D+S   L++D + +LG DLSFV+ +++MEP+W++S+  QVISRAHRMGA  PI+V+ LAM
Sbjct: 857  DSSFQVLILDSTGALGHDLSFVSHIYIMEPVWNQSLASQVISRAHRMGAKEPIYVDILAM 916

Query: 1100 RGTVEEQML 1108
            +GTVEE M+
Sbjct: 917  KGTVEETMV 925



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 77/142 (54%), Gaps = 7/142 (4%)

Query: 122 ISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHR 181
           +  + DD+   IL  L   ++   A TCR  + +  S +  +KL L PHQ+ A+++ML R
Sbjct: 156 VFSLPDDLYCRILDYLSVQEVRYFARTCRRAKDICDSYISGLKLTLLPHQRRALKFMLKR 215

Query: 182 EWN-AEVLRHPLYIDLATEDGFYF----YVNTVSGDIATGT--APTMRDFHGGMFCDEPG 234
           E       R+P        + F F    YVN+V+G I+     +    DF GG++CDEPG
Sbjct: 216 ERKETSFYRNPCLYCFRFPENFKFWDSFYVNSVAGTISLQPPGSEVFEDFRGGLYCDEPG 275

Query: 235 LGKTITALSLILKTQGTLADPP 256
           LGKTIT L+LILKT    AD P
Sbjct: 276 LGKTITILALILKTFRQYADGP 297


>gi|302843304|ref|XP_002953194.1| hypothetical protein VOLCADRAFT_93875 [Volvox carteri f. nagariensis]
 gi|300261581|gb|EFJ45793.1| hypothetical protein VOLCADRAFT_93875 [Volvox carteri f. nagariensis]
          Length = 1876

 Score =  314 bits (805), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 224/666 (33%), Positives = 299/666 (44%), Gaps = 136/666 (20%)

Query: 434  TWVQCDACHKWRKLLDASVA-DATAAWFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGFH 492
             WVQC+ C  WR+L   ++A +    WFC M+  P   SC  P E +D+       PGF 
Sbjct: 608  VWVQCEQCRVWRRLPSGTLAPEGDDPWFCHMHPLPETASCTAPREEYDSDGEFANAPGFF 667

Query: 493  AKGTSDG-------------KKQNVSFFISVLKEHYLLINS------MTKKALTWLAKLS 533
              G  D              +  NV +F S L+     +           KAL+WL    
Sbjct: 668  RPGDQDTAGAGGDGGVGERVRVSNVEYFTSTLRAAAAALGVDAGRELAGMKALSWLVAQE 727

Query: 534  PDELSEMETTGLASPILGSYAAGETQGFHKIFQAFGLIRRVEKGIT-------------- 579
            P  L      G+  P    +    + G+  +F+   L+   +                  
Sbjct: 728  PAALHS-HGPGVVVPTEVRHT---SIGYDTVFRKLDLVPVGDINGGGGSCRRGRGGGRRA 783

Query: 580  ----------------RW----YYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIV 619
                            RW    Y  + L ++    AAL      P   +R YLS ATL+V
Sbjct: 784  GGGRGGGSSASSFTQHRWRTAPYMVRLLLDIKALAAALAALRSRPDGPIRFYLSAATLVV 843

Query: 620  VPSYLVDHWKTQIQQHVRPGQLHLFVWT---DHKKPSAHSLAWDYDVVITTFNRLSAEWG 676
            +P+ L+DHW  QI+ HV  G L + V         PS  SLAW+YD+VITTFNRLS    
Sbjct: 844  LPATLIDHWLQQIRTHVARGALRVCVLDRLDPRAAPSPASLAWEYDIVITTFNRLSFGKP 903

Query: 677  RRKKSPMM----------------QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
              + S +                 Q+HWLRV+LDEGH LG+S  +TNKLQ A +L A  R
Sbjct: 904  NHRTSVLAAGGGSGSHGGWSQVLSQIHWLRVILDEGHLLGASTAITNKLQAACALLAERR 963

Query: 721  WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
            W++TGTPTP T  S  +HLQP+L FLH E YG N   W   + RP +A   EGR RL++L
Sbjct: 964  WVMTGTPTPATHGSSAAHLQPLLAFLHHEPYGTNAATWQAAVQRPLDACRPEGRRRLMRL 1023

Query: 781  LHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVES 840
            L   MI A K DL  +P  +++VT L+F  +HA +YNELV  VRRN+L +DW D +H ES
Sbjct: 1024 LREIMIRASKADLVLLPRLVRKVTLLDFEPQHAKSYNELVEVVRRNLLTSDWCDEAHTES 1083

Query: 841  LLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVEN-GLD---------- 889
            LL+P Q ++    + N+ LSCCVAG        ED+ ET+ +L E  GL           
Sbjct: 1084 LLSPGQGRWSRQMMNNVWLSCCVAGSTNNVVKEEDLLETLQLLCERLGLPAPPGAPQQPP 1143

Query: 890  ---------------------------------PLSQEYAFIKYNLLNGGNC------LR 910
                                             P       ++  L  G  C      +R
Sbjct: 1144 LSGSGGGSRAAAGGPGSASVSVGGVLSLGPPWLPGDHPLKRVEEGLRYGTECQVCGEFVR 1203

Query: 911  HILCLDC--------VAMDSEKCSLPGCGFLYEMQSPEILTRPE-NPNPKWPVPQDLIEL 961
              +   C         A D E+C LP C   Y MQ+ +   R + N NPKWPVPQ+LIE 
Sbjct: 1204 QPMVTPCGHLACLDCTASDRERCPLPSCRTPYLMQAVDDAARKKHNKNPKWPVPQELIEW 1263

Query: 962  QPSYRQ 967
            QP Y Q
Sbjct: 1264 QPVYHQ 1269



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 56/74 (75%)

Query: 1032 KSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRP 1091
            ++L  F+HD  C  L+MD   ++GLDLSFV+ V LMEP+ D S+E+QV+SRAHRMGA R 
Sbjct: 1513 EALSRFQHDPHCGVLVMDQLGAVGLDLSFVSYVLLMEPLEDVSLEQQVVSRAHRMGARRA 1572

Query: 1092 IHVETLAMRGTVEE 1105
            + VETL MRG+ EE
Sbjct: 1573 VEVETLVMRGSAEE 1586



 Score = 47.8 bits (112), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 26/43 (60%)

Query: 234 GLGKTITALSLILKTQGTLADPPDGVKIIWCTHNGDPRCGYYD 276
           GLGKTITALSL+LKT G L  PP G  + W       R G Y+
Sbjct: 257 GLGKTITALSLVLKTLGQLPAPPPGAHVEWLPSREGRRVGVYN 299



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)

Query: 122 ISDIADDIVISILTRLGPIDLVRIAATC--RHLRCLAASIMPCMKLKLFPHQ 171
           I ++  +++  I++RLGP+DL R+ ATC        A   +P ++L LFPHQ
Sbjct: 205 ILELPPEVLEGIMSRLGPLDLARLRATCTALADAGAAGGAVPGVRLTLFPHQ 256


>gi|255084521|ref|XP_002508835.1| SNF2 super family [Micromonas sp. RCC299]
 gi|226524112|gb|ACO70093.1| SNF2 super family [Micromonas sp. RCC299]
          Length = 1459

 Score =  307 bits (786), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 203/542 (37%), Positives = 283/542 (52%), Gaps = 93/542 (17%)

Query: 657  LAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLT 716
            LA  +D+VI   NRLS E+ R   SP+++VHW RV+LDEGH LG +  +T KL MA +L 
Sbjct: 502  LANRWDLVIIPVNRLSYEFSR--DSPILRVHWRRVVLDEGHQLGGASAITAKLSMACALR 559

Query: 717  ASNRWLLTGTPTPNT-PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS 775
            A  RW++TGTPTP T   + + HL P+L FL +  Y  +Q+ W   I RP +    +G  
Sbjct: 560  AHARWVMTGTPTPATLKGAGVGHLHPLLAFLRQAPYASSQQLWMQAIQRPLDGGGAKGGG 619

Query: 776  ------RLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILM 829
                  RL  LL R  I   K+D++  PL  +EV  L FT  HA +YNE+V  VRR++L+
Sbjct: 620  GADAAARLGSLLRRVAIRTLKSDIRLPPL-EREVRGLAFTRAHALSYNEIVSHVRRSLLL 678

Query: 830  ADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVE---- 885
            ADW DPSHVESLLNP+Q +     ++NLR + CV G   V   G ++ ET++ LVE    
Sbjct: 679  ADWADPSHVESLLNPRQTRLAMEAVQNLREAACVTGVYPVHCFGPEMDETVEDLVEALKR 738

Query: 886  --NGLDPLSQEYAFIKYNL-LNGGNCLR--------------HILCLDCVAMDSEKCS-- 926
              +G +  +     ++Y L +  G C R              H+LC  CVA+  ++    
Sbjct: 739  RGHGHESATARANELRYPLTVAKGRCQRCDVDAFMPLVTPCGHLLCCGCVAVVGDESGRG 798

Query: 927  ------------------LPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ- 967
                               P C   ++MQ+P+   R +NP P+  VPQDLIE+QPSY Q 
Sbjct: 799  VSSAPQEDFLHETRAPVRCPVCASPFKMQAPD--PRLDNPAPRQAVPQDLIEIQPSYVQL 856

Query: 968  -WSNTNTFLKQ-----------------------------------DLYRPNLESNKAL- 990
             W   +    Q                                   DL R  + S +A  
Sbjct: 857  PWKMVDALEAQGESTKVEYLLARLRELGAAPLEREKGAPGDGDDAGDLERLAVWSRRASG 916

Query: 991  -PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYS-PMHSSNKIKSLDMFRHDASCLALLM 1048
             P K I++S F  H+ VI+  L+ A + FA +    M   +K ++L  FR D     LL+
Sbjct: 917  PPPKCIVYSGFRTHLDVIDLALSGAKVNFANIARIGMSRWDKDRALASFRADPDVSVLLL 976

Query: 1049 DGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            D +A+ GLDLSFV RVF+ EP+ + S+E+QV+SRAHRMG    + VE LAMRGT EE +L
Sbjct: 977  DRAAAEGLDLSFVQRVFVAEPLDNASLEQQVVSRAHRMGQRGTVIVEVLAMRGTAEETLL 1036

Query: 1109 EF 1110
            + 
Sbjct: 1037 DV 1038



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 99/229 (43%), Gaps = 37/229 (16%)

Query: 64  FRHVSCDWEKRKSVLLDGGECFKDGCDSSIWNISDCHVLD----------------WKPD 107
           F H  CDW       LD G        +    +  C + D                 +P 
Sbjct: 21  FGHARCDWASS----LDRGHPHHRHARAGFCGVVGCEIHDASRGGPTGSLRGALERLRPR 76

Query: 108 SSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPCMKLKL 167
           +    P D + +  +         ++L+RL P      A+TC   R       P +KL+L
Sbjct: 77  APTYVPIDRAVAMALD--------AVLSRLDPRGCAAFASTCVGARQRIDCRAPGLKLRL 128

Query: 168 FPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGG 227
            PHQ+A + WM  RE        P   D        ++VN ++G+++T   P+  D  GG
Sbjct: 129 HPHQEAGLAWMRARERPNGSASMPPLPDP------RYWVNVLTGEMSTSPPPSYADSPGG 182

Query: 228 MFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHNGDPRCGYYD 276
           + CDEPGLGKT+TAL+L+L T+G    PPDG +      +G   C YY+
Sbjct: 183 LLCDEPGLGKTVTALALVLATRGARPAPPDGHRARRDEASG---CWYYE 228


>gi|307104445|gb|EFN52699.1| hypothetical protein CHLNCDRAFT_54357 [Chlorella variabilis]
          Length = 1906

 Score =  294 bits (753), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 208/561 (37%), Positives = 292/561 (52%), Gaps = 85/561 (15%)

Query: 624  LVDHWKTQIQQHVR-PGQLHLFVWTDHKKPSA---------HSLAWDYDVVITTFNRLSA 673
            +++HW+ Q + HVR    L + V+T      A           LAW+ DV++TTF  LS 
Sbjct: 785  IIEHWQHQKRLHVRQEAGLRVLVYTGDAVKEASRLGQALTLEQLAWETDVILTTFQTLSN 844

Query: 674  EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
            EW     S ++QVH+ RV+LDEGH++G S + TNK +MA  L A  RW++TGTPTPNTP+
Sbjct: 845  EWSYGASSRLLQVHFQRVILDEGHSIGGS-DTTNKHRMATKLLAERRWVMTGTPTPNTPD 903

Query: 734  SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDL 793
            + + +L+P+L FLH++ Y Q ++ W      PF+A  E GR RLL LL RCMI A K +L
Sbjct: 904  ASVENLRPLLAFLHQQPY-QEERFWKKA--EPFQARQEVGRLRLLALLQRCMIRASKDEL 960

Query: 794  QT--IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS 851
             +  IP    + + L+F   HA +YN  V  VR N++ ADW DP + +SLLN    K+  
Sbjct: 961  LSLGIPPLKCKTSLLDFAPAHATSYNGFVDIVRFNLVTADWFDPGNTQSLLNCINSKWAI 1020

Query: 852  TTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRH 911
             T+ NL  SC VAG+ ++    +D+ ETM +L    ++ + Q    +  +    G   + 
Sbjct: 1021 PTLMNLHKSCNVAGNCQLQVLEQDVVETMQLLTRRHIN-MQQ----LAPDPAAAGPSRQQ 1075

Query: 912  ILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRP-------------------------- 945
             L   C A + E+   P    L +   PE   R                           
Sbjct: 1076 PLVQLCHAAEEEEGKPPPLQQLLDEAGPEWSRRARHIRACLEEGGACDLCSSVVRGKNDP 1135

Query: 946  ----ENPNPKWPVPQDLIELQPSYRQ--------------WSNTNTFLKQDLYRPNLESN 987
                +N  PKW VPQ+LIE QP+Y Q              W +T +     L R  LE  
Sbjct: 1136 ARLKDNSCPKWSVPQELIEWQPAYAQRGAKGISEGFWQADWKHTQSTKCVHLLRRLLEVG 1195

Query: 988  KA-LP-------DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF-- 1037
             A LP        K I+++QF EH+ V+E+ L   G+  A +     +  K  +L  F  
Sbjct: 1196 AAVLPSSGRQPSSKAIVYTQFWEHMSVVERYLRSHGVAVAVLKRSDTALQKRVALSRFRA 1255

Query: 1038 RHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQ----------VISRAHRMG 1087
            R   S   LLMD +  +GLDLSFV+ VFL+EPI D ++EEQ          VISRAHRMG
Sbjct: 1256 RGPGSAGVLLMDKTGQVGLDLSFVSNVFLIEPIMDLAVEEQASCYNAKQLRVISRAHRMG 1315

Query: 1088 ATRPIHVETLAMRGTVEEQML 1108
            A + +HVETLAMRGT+EE ++
Sbjct: 1316 ARQAVHVETLAMRGTLEEDIV 1336



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 109/234 (46%), Gaps = 49/234 (20%)

Query: 88  GCDSSIWNISDC-HVLDWKPDSSRVK---PEDNSCSTGISDIADDIVISILTRLGPIDLV 143
           G D+ +++++ C   L  K   +++    P D++    +  + + +  S+L+RL    L 
Sbjct: 178 GTDAEVFSLTGCFRALPMKFGQAQLAELCPADSAQPCPLDQLDESVTRSVLSRLDRRSLA 237

Query: 144 RIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLY-----IDLAT 198
            + ATCRH+R L   + P +KLKL+PHQ+ AV WM  RE     +RHP       ++L  
Sbjct: 238 AMGATCRHMRDLCLDVAPGLKLKLYPHQREAVLWMQQREKAGGPMRHPTIRAFQCLELGP 297

Query: 199 ED----------------------------------GFYFYVNTVSGDIATGTAP-TMRD 223
            D                                  G  F+ +T +G + T   P  + D
Sbjct: 298 GDDPFAAAAGSLADCIASSSSSGGGCSGSGAPPFELGLPFWADTATGQLWTEKPPQQLVD 357

Query: 224 FHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHNGDPRCGYYDL 277
             GG+F DEPGLGKTIT L+LIL++   L  PP G  + W      P CG+Y L
Sbjct: 358 SRGGLFADEPGLGKTITMLALILRSLRRLPAPPPGA-VTWVR----PGCGFYSL 406



 Score = 56.6 bits (135), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 10/114 (8%)

Query: 432 NETWVQCDACHKWRKLLDASVADATAAWFCSMNSDP--THQSCGDPEEAWDNCQSITYLP 489
            +TWVQCDAC KWR+L   S A     W C+MN D     Q C  PE++WD   S     
Sbjct: 526 EDTWVQCDACQKWRQLPPGSQA-PCGDWVCAMNPDERLQWQGCQAPEDSWDGGASR---- 580

Query: 490 GFHAKGTSDGKKQNVSFFISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETT 543
                    G+         +L +H   ++S++   LTWL++    +L E   T
Sbjct: 581 -VGGSWEPTGRPAQRDLLPPLLAQHPNQMDSISP--LTWLSRQPLAKLMEAPFT 631


>gi|302811366|ref|XP_002987372.1| hypothetical protein SELMODRAFT_426184 [Selaginella moellendorffii]
 gi|300144778|gb|EFJ11459.1| hypothetical protein SELMODRAFT_426184 [Selaginella moellendorffii]
          Length = 306

 Score =  293 bits (751), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 148/260 (56%), Positives = 186/260 (71%), Gaps = 27/260 (10%)

Query: 829  MADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGL 888
            MADWNDP HVESLLNPKQWK ++TT+RN+RLSCCVAGHIKV +A +DIQETM++LV++G+
Sbjct: 1    MADWNDPDHVESLLNPKQWKLKNTTLRNVRLSCCVAGHIKVRNANQDIQETMEMLVQDGM 60

Query: 889  DPLSQEYAFIKYNLLNGGNCL--------------RHILCLDCVAMDSEKCSLPGCGFLY 934
            DP S +Y FIK +LL GGNC               RH LCL CV++D E+C LP CG  Y
Sbjct: 61   DPTSDQYGFIKGSLLLGGNCFRCGEWCRLPILTPCRHFLCLSCVSLDCERCILPECGKPY 120

Query: 935  EMQSPEILTRPENPNPKWPVPQDLIELQPSY------RQWSNTN----TFLKQDLYRPNL 984
            +MQ+P+   RPENPNP+WPVPQDLIELQPSY       QW  T+    ++L + L R   
Sbjct: 121  QMQTPK--ARPENPNPQWPVPQDLIELQPSYIQEDWHSQWQATSSSKASYLVERL-RGLQ 177

Query: 985  ESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCL 1044
            + N  LP+K I+FSQFLEHI  IE QLT  G++ AGMYSPM +++K+KSL  F+ +  C+
Sbjct: 178  QENGKLPEKAIVFSQFLEHISAIELQLTKGGVEHAGMYSPMPAASKMKSLRTFQENPKCV 237

Query: 1045 ALLMDGSASLGLDLSFVTRV 1064
             LLMD S++LGL LS VT V
Sbjct: 238  VLLMDNSSALGLGLSLVTHV 257


>gi|348687942|gb|EGZ27756.1| hypothetical protein PHYSODRAFT_474791 [Phytophthora sojae]
          Length = 1282

 Score =  262 bits (669), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 201/602 (33%), Positives = 289/602 (48%), Gaps = 102/602 (16%)

Query: 604  PLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFV--WTDHKKPSAHSLAWDY 661
            P+D+  L  S A+LIVVP  LV+HWK Q++ HV PG L +FV    +HK P    LA +Y
Sbjct: 384  PVDTRDLVSSGASLIVVPDPLVEHWKYQVETHVAPGALRVFVDPGVEHKLPFNIDLA-EY 442

Query: 662  DVVITTFNRLSAEWG-----------------------------RRKKSPMMQVHWLRVM 692
            DVVIT+F RL+ EW                              R + S ++ VHW+RV+
Sbjct: 443  DVVITSFTRLAREWRLHRPTSALEERMPERYGFEGPQRYADGTLRGEVSSLLTVHWVRVI 502

Query: 693  LDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS-QLSHLQPMLKFLHEEAY 751
            +DEGH LG     ++ +Q+A  L A  RW++TGTPTPNT  S  L ++  +L FL    Y
Sbjct: 503  VDEGHKLGGQ-TPSDLMQLARLLCAERRWVMTGTPTPNTLQSADLRYMHGLLVFLRNLPY 561

Query: 752  GQ-NQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTI-PLCIKEVTFLNFT 809
            G  + +AW   I RPFE     G  RL  LL R M+   K  ++ I P  ++   F++ T
Sbjct: 562  GNPDGQAWVKAIARPFERNEIVGFYRLQHLLSRIMMRHTKESIREILPQPVRRTVFIDPT 621

Query: 810  EEHAGTYNELVVTVRRNILMADWNDP-----SHVESLLNPKQWKFRSTTIRNLRLSCCVA 864
                  YN +   VR N+++ +  DP      H +SLLNP   K     + NLR +CC  
Sbjct: 622  PSEYAQYNGVAAAVRANLVITNM-DPKTPGCQHPDSLLNPINRKDALRVVSNLRSACCGG 680

Query: 865  GHIKVTDAGEDIQETMDVL----VENGLDPLSQEYAFIKYNLLNG-----GNCLR----- 910
              +K++ A     +T+++L    VE   + ++    +++   L G     G C R     
Sbjct: 681  SAVKISLAELSRLDTINMLNDLRVEG--ENMTVVLEYLRKVQLQGMVTECGCCKRKLQLL 738

Query: 911  ------HILCLDCV----------------AMDSEKCSLPGCGFLYEMQSPEILTR---- 944
                  H+ C DCV                  D E       GF +EM     L      
Sbjct: 739  MIIPCGHLCCADCVEDRMARVGPVCFRCNAVFDREAFQRLQPGFEFEMVEAVALETNNLD 798

Query: 945  -----------PENPNPKWPVPQDL--IELQPSYRQWSNTNTFLKQDL---YRPNLESNK 988
                       P  P     + +D+  I+   ++   +      K+ L    +P++ S++
Sbjct: 799  LNQNEENGQHAPRQPRRALDLTRDIHFIDASKAFYAATRIKELKKEFLLGSVQPSIRSSR 858

Query: 989  --ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
              A   K IIFSQF EHI   +      G+  A   + +    ++K L  FR D +   L
Sbjct: 859  RQARYLKAIIFSQFKEHIWHTKVAFAQQGVPTADFIAGLSPEVRMKQLMRFRKDPNVNVL 918

Query: 1047 LMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQ 1106
            L+    S GLDLSFVT +FLM+ IWD+S+E+QVISRAHRMGA++ + VE L MRG+VE Q
Sbjct: 919  LLTEVGSHGLDLSFVTHIFLMDEIWDKSLEQQVISRAHRMGASQAVVVEQLWMRGSVESQ 978

Query: 1107 ML 1108
            ML
Sbjct: 979  ML 980



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 122 ISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHR 181
           ++D+  +++ +I+  +   DL  ++  C   + +A  ++P + L L+ HQ+  ++WML R
Sbjct: 246 MTDLPTNVLQNIVCLMNARDLASLSGVCSLFQHMAYEVVPGLNLVLYEHQRRGLKWMLRR 305

Query: 182 EWNAEVL---RHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKT 238
           E  +       HP  +   ++      V+ +   + T    T  D  GGMFCDEPGLGKT
Sbjct: 306 ETPSLTCIPQPHPFILSSESQSESATAVDLIEDRVITHRHVTASDACGGMFCDEPGLGKT 365

Query: 239 ITALSLILKTQGTLAD 254
           IT L+LIL+T+G   D
Sbjct: 366 ITMLALILRTKGQTTD 381


>gi|302787204|ref|XP_002975372.1| hypothetical protein SELMODRAFT_415387 [Selaginella moellendorffii]
 gi|300156946|gb|EFJ23573.1| hypothetical protein SELMODRAFT_415387 [Selaginella moellendorffii]
          Length = 278

 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/291 (50%), Positives = 180/291 (61%), Gaps = 60/291 (20%)

Query: 829  MADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGL 888
            MADWNDP HVESLLNPKQWK ++TT+RN+RLSCCVAGHIKV +A +DI            
Sbjct: 1    MADWNDPDHVESLLNPKQWKLKNTTLRNVRLSCCVAGHIKVRNANQDIH----------- 49

Query: 889  DPLSQEYAFIKYNLLNGGNCLR--------------HILCLDCVAMDSEKCSLPGCGFLY 934
                          L GGNC R              H LCL CV++D E+C LP CG  Y
Sbjct: 50   --------------LLGGNCFRCGEWCRLPILTPCLHFLCLSCVSLDCERCILPECGKPY 95

Query: 935  EMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ------WSNTNT----FLKQDLYRPNL 984
            +MQ+  +  RPENPNPKWPV    IELQPSY Q      W  T++    +L + L R   
Sbjct: 96   QMQT--LKARPENPNPKWPV----IELQPSYIQEDWHSEWQATSSSKASYLVERL-RGLQ 148

Query: 985  ESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCL 1044
            + N  LP+K I+FSQFLEHI  IE QLT  GI+ AGMYS      ++KSL  F+ +  C+
Sbjct: 149  QENGKLPEKAIVFSQFLEHISAIELQLTKGGIEHAGMYSKQAGCYQMKSLRTFQENPECV 208

Query: 1045 ALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
             LLMD S++LGLDLSFVT  FL++    RS+EEQV+SRAH MGATRP+ V+
Sbjct: 209  VLLMDNSSALGLDLSFVTHAFLIK----RSIEEQVVSRAHGMGATRPVLVD 255


>gi|301116782|ref|XP_002906119.1| F-box protein, putative [Phytophthora infestans T30-4]
 gi|262107468|gb|EEY65520.1| F-box protein, putative [Phytophthora infestans T30-4]
          Length = 1126

 Score =  251 bits (642), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 207/637 (32%), Positives = 294/637 (46%), Gaps = 103/637 (16%)

Query: 604  PLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFV--WTDHKKPSAHSLAWDY 661
            P+D   L  S A+LIV P  LV+HWK Q++ HV PG L +FV    + K P    LA +Y
Sbjct: 369  PVDYEDLVSSGASLIVAPDPLVEHWKYQVEAHVAPGALRIFVDPGVEFKLPFNFDLA-EY 427

Query: 662  DVVITTFNRLSAEWG-----------------------------RRKKSPMMQVHWLRVM 692
            DVVIT+F RL+ EW                              R   S ++ VHWLRV+
Sbjct: 428  DVVITSFTRLAREWRLHRPTSALEARMPERYGFEGPQRYADGTLRGNVSSLLTVHWLRVI 487

Query: 693  LDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS-QLSHLQPMLKFLHEEAY 751
            +DEGH LG     ++ +Q+A  + A  RW++TGTPTPNT  S  L ++  +L FL    Y
Sbjct: 488  VDEGHKLGGQ-TPSDLMQLARLICAERRWVMTGTPTPNTLQSADLRYMYGLLVFLRNRPY 546

Query: 752  GQ-NQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTI-PLCIKEVTFLNFT 809
            G  + +AW   I RPFE     G  RL  LL R M+   K  ++ I P   +   F++ T
Sbjct: 547  GNPDGQAWVKAIARPFERNDIVGFYRLQHLLSRIMMRHTKESIREILPEPTRRTVFIDPT 606

Query: 810  EEHAGTYNELVVTVRRNILMADWNDP-----SHVESLLNPKQWKFRSTTIRNLRLSCCVA 864
                  YN +   VR N+++ +  DP      H +SLLNP   K     + NLR +CC  
Sbjct: 607  PSEYSQYNGIAAAVRANLVITNM-DPKTPGHQHPDSLLNPVNRKEALRVVSNLRAACCGG 665

Query: 865  GHIKVTDAGEDIQETMDVLVENGLDP--LSQEYAFIKYNLLNG-----GNCLR------- 910
              +KV+ A     +T+++L    +D   +     +++   L G     G C R       
Sbjct: 666  SAVKVSLADSSRLDTINMLNALSVDGENMGTVIDYLRKVQLQGMVTQCGCCKRKLQLLMI 725

Query: 911  ----HILCLDCVAMDSEKCSLPGC-----------------GFLYEMQSPEILTRPE--- 946
                H+ C DCV    E+   P C                 GF +E+     L   +   
Sbjct: 726  IPCGHLCCADCVEDRMERVG-PICFRCNAVFDREAFQRLQPGFEFELVEAVTLEANDPDR 784

Query: 947  -----------NPNPKWPVPQDLIELQPSYRQWSNTNTF-LKQDLYRPNLE------SNK 988
                        P       +D+  +  S   ++ T    LK++  + N+         +
Sbjct: 785  DQEANGQIARRQPRRAMDYTRDIHFIDASKAFYAATRIKELKEEFLQRNMNPSSRSSRRQ 844

Query: 989  ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM 1048
            A   K IIFSQF +HI   +      G+  A   + +    ++K L  FR D +   LL+
Sbjct: 845  ARNLKAIIFSQFKDHIWHTKVAFAQQGLHTADFIAGLSPEIRMKQLTRFRKDPNVNVLLL 904

Query: 1049 DGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
                S GLDLSFVT +FLM+ IWD+S+E QVISRAHRMGA   + VE L MRG+VE  ML
Sbjct: 905  TEVGSHGLDLSFVTHIFLMDEIWDKSLERQVISRAHRMGANHAVVVEQLWMRGSVESHML 964

Query: 1109 EFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAES 1145
            +  + +D  +  L+E   KP +  A S RT     ES
Sbjct: 965  KPHELSDENQIELEE---KP-KVLASSTRTRAQLGES 997



 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 3/136 (2%)

Query: 122 ISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHR 181
           ++D+  +++ +I+  +    L  ++  C   + +A  ++P + L L+ HQ+  ++WML R
Sbjct: 231 MTDLPTNVLQNIVCLMNARGLASLSGVCSLFQHMAYEVVPGLNLVLYEHQRRGLKWMLRR 290

Query: 182 EWNAEVL---RHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKT 238
           E          HP  +   +       ++ +   + +    T RD  GGMFCDEPGLGKT
Sbjct: 291 ETRTLSCIPQPHPFILSSESNSVSATAIDLIEDRVISHPHETARDACGGMFCDEPGLGKT 350

Query: 239 ITALSLILKTQGTLAD 254
           IT L+LIL+T+G   D
Sbjct: 351 ITMLALILRTKGQSTD 366


>gi|308804449|ref|XP_003079537.1| RING finger-like protein (ISS) [Ostreococcus tauri]
 gi|116057992|emb|CAL54195.1| RING finger-like protein (ISS) [Ostreococcus tauri]
          Length = 1539

 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 160/496 (32%), Positives = 232/496 (46%), Gaps = 101/496 (20%)

Query: 564 IFQAFGLIRRVEKGITRWYYP-----KTLDNLAFDLAALRLALC------EPLDSVRLYL 612
           +F A GL++    G     +P        D+L  D  AL  A+C         ++ R++L
Sbjct: 406 LFHALGLVKYDGIGKLENAFPFAPPGPCEDDLILDKQALHDAVCAVDNRRRGGETTRVWL 465

Query: 613 SRATLIVVPSYLVDHWKTQI----------------------QQHVRPGQL--------- 641
           SRAT I++PS L++HW TQI                      +   + G++         
Sbjct: 466 SRATFIIIPSVLIEHWLTQIRICTGGDAARWIPRVAVLDKSPKNDKKEGEVKSEGAWEPT 525

Query: 642 HLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGS 701
           ++F ++D     A  LA D+D+VI   NRLS E+ +   SP++++ W RV++DEGH LG+
Sbjct: 526 YMFDFSDM---DASDLASDFDIVIMPINRLSTEFSK-VDSPLLRIMWQRVIMDEGHQLGA 581

Query: 702 SLNLTNKLQMAISLTASNRWLLTGTPTPNT-PNSQLSHLQPMLKFLHEEAYGQNQKAWDG 760
           +L +T KL +A +L A  RWL+TGTPTP+T      +HLQP+L FL +  YG +   W  
Sbjct: 582 TLAITAKLSVACALKAHARWLMTGTPTPSTLKGDGTAHLQPLLGFLRQPPYGNSTALWSN 641

Query: 761 GILRPFEAE----MEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTY 816
            + RP E        +   RL  +L RCM+   K+ +  +P   +  T L F++ HA +Y
Sbjct: 642 AVQRPLEGTDRLTQVDAVLRLGDILRRCMVRTCKSHI-LLPPMKRTTTMLKFSDVHAESY 700

Query: 817 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDI 876
           N+LV  V+R++L+ADW DP H ESLLNPK     S  + NLR + CV G +  T   ++ 
Sbjct: 701 NDLVAHVKRSLLLADWGDPCHEESLLNPKNVLSASAAVTNLREAACVVGKMPTTFDPDEF 760

Query: 877 QETM----DVLVENGLDPLSQEYAFIKYN---LLNGGNC--------------LRHILCL 915
            ET+      L + G     ++    + +   +   G C                HILC 
Sbjct: 761 DETIRDLHHYLKKRGFGEEERKARCRRVSPMLMQCKGTCDLCAHEVIMPLVTPCAHILCC 820

Query: 916 DCVAMDSEKCSL------------------------PGCGFLYEMQSPEILTRPENPNPK 951
            CV     K                           P CG  Y MQ       P N NP 
Sbjct: 821 GCVMHGPPKGKTLNGVENAVDEPDLPPGIVRAPRGCPVCGSAYVMQR----ENPYNSNPA 876

Query: 952 WPVPQDLIELQPSYRQ 967
             VP+DLIELQPSY Q
Sbjct: 877 QAVPEDLIELQPSYIQ 892



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 87/155 (56%), Gaps = 5/155 (3%)

Query: 961  LQPSYRQWSNTNTFLKQDLYRP----NLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGI 1016
            + P+ R  +N     + D+  P    + + +   P K I++S F  H+  I+  L  A +
Sbjct: 961  INPNARPQTNRRKRRRLDVALPLKVRDFKPSMPPPKKCIVYSSFRPHLDSIDLALYGARV 1020

Query: 1017 KFAGMYSPMHSS-NKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSM 1075
                +     +   + ++L  F++D     LL++ +A+ GLDLSFV+ VFLMEP+ + S+
Sbjct: 1021 PHESITRIGQTRFEREEALKTFKNDPDVAVLLLNRAAAEGLDLSFVSYVFLMEPLSNMSL 1080

Query: 1076 EEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            EEQV+SRAHRMG    +HVE LAM  T EE ML+ 
Sbjct: 1081 EEQVVSRAHRMGQMDTVHVEVLAMENTAEETMLDV 1115



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 79/154 (51%), Gaps = 6/154 (3%)

Query: 124 DIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREW 183
           D+ +D++  IL  L       +AATCR  R       P M L L PHQ+AA+ WM  RE 
Sbjct: 72  DLPEDVLSRILGFLDVRCAGTLAATCRGFRSRVEETSPGMALTLHPHQRAALGWMRRRER 131

Query: 184 NAEV-LRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITAL 242
                ++ PL+     +DG   ++NT+ GD++        D  GGM CDEPGLGKT+TAL
Sbjct: 132 ARLPRVQDPLWKRFECDDGRVLWLNTIKGDLSDQHPEVHEDSQGGMLCDEPGLGKTVTAL 191

Query: 243 SLILKTQGTLADPPDGVKIIWCTHNGDPRCGYYD 276
           +L+L  +G    PP G     CT        YYD
Sbjct: 192 ALVLARRGWRPSPPPG-----CTARKIGERWYYD 220


>gi|145347265|ref|XP_001418094.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578322|gb|ABO96387.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1594

 Score =  226 bits (575), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 161/501 (32%), Positives = 230/501 (45%), Gaps = 104/501 (20%)

Query: 564 IFQAFGL-----IRRVEKGITRWYYPKTLDNLAFDLAALRLAL---------CEPLDSVR 609
           IF+A GL     + ++E  I         ++L  D  AL  A+          EP+   R
Sbjct: 397 IFRALGLEPYTGVGKLENAIPYAPPGSATEDLILDKQALHDAIRVVDNRGSSSEPM---R 453

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQ----------------------------QHVRPGQL 641
           ++LS ATLI++PS L++HW  QI                              +   G L
Sbjct: 454 VWLSSATLIIIPSVLIEHWLQQISFCTWNITGEGVPRVAVLDKPPKVDGFSSVYKTEGSL 513

Query: 642 HLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGS 701
                 D     A  LA D+D+VI   NRLS E+ +   +P++++ W RV+LDEGH LG+
Sbjct: 514 EPVHLNDLAHVDAKDLANDFDIVIMPINRLSTEFSK-VDTPILRILWQRVILDEGHQLGA 572

Query: 702 SLNLTNKLQMAISLTASNRWLLTGTPTPNT-PNSQLSHLQPMLKFLHEEAYGQNQKAWDG 760
           SL +T KL +A +L A  RWL+TGTPTP T   +  +HLQP+L FL +  YG +   W  
Sbjct: 573 SLAVTAKLSVACALKAHARWLMTGTPTPTTLKGAGTAHLQPLLGFLRQPPYGTSAGLWTT 632

Query: 761 GILRPFEAE----MEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTY 816
            + RP E        +   RL  +L RCM+   K+ ++  PL  +  + L F++ HA +Y
Sbjct: 633 AVQRPLEGRDRFAQADAVVRLGDVLRRCMVRTCKSHIELPPL-KRTTSMLQFSDVHADSY 691

Query: 817 NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDI 876
           N+LV  V+RN+L+ADW DP+H ESLLNPK  +  + T+ NLR + CV G + +T + ++ 
Sbjct: 692 NDLVAFVKRNLLLADWGDPNHTESLLNPKNVREAAATVTNLREAACVVGQMPITCSSDEF 751

Query: 877 QET----MDVLVENGLDPLSQEYAFIKYN---LLNGGNC--------------LRHILCL 915
            ET    M +L E G     ++    + +   +   G C                HILC 
Sbjct: 752 DETILALMQLLKERGFGDEERKARVRRVSPMLMQCKGTCDLCLHKVLMPLVTPCAHILCC 811

Query: 916 DCVAMDSEKCSL---------------------------PGCGFLYEMQSPEILTRPENP 948
            CV     K                              P CG  Y M+         N 
Sbjct: 812 GCVMRGPPKGKTLNGKDVEDERVNEPELPPGVHRAPRGCPVCGSAYFMEE----DHDNNL 867

Query: 949 NPKWPVPQDLIELQPSYRQWS 969
           NP   VP+DLIELQP   Q S
Sbjct: 868 NPVQEVPKDLIELQPKLEQHS 888



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 1/136 (0%)

Query: 124 DIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHRE- 182
           D+ +D+V  IL  L P     +A TCR  R       P + L L PHQ+AA+ WM  RE 
Sbjct: 58  DLPEDVVERILGFLDPKCASTLACTCRGFRSRVEETSPGLALTLHPHQRAALGWMRRRER 117

Query: 183 WNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITAL 242
                +  PL+  +  EDG   +++T+ G+++        D  GGM CDEPGLGKT+TAL
Sbjct: 118 ARLPPILDPLWKPIDCEDGRVLWLHTLKGELSDHHPDVYEDSQGGMLCDEPGLGKTVTAL 177

Query: 243 SLILKTQGTLADPPDG 258
           +L+L  +G    PP G
Sbjct: 178 ALVLARRGWRPSPPIG 193



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 1/127 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSS-NKIKSLDMFRHDASCLALLMD 1049
            P K II+S F  H+  I+  L  A +    +     S  ++ ++L  F++D  C  LL++
Sbjct: 995  PKKCIIYSDFRPHLDTIDLALYGARVPHESITRIGQSRYDREQALKNFKNDPDCAVLLLN 1054

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +A+ GLDLSFV+ VFLMEP+ + S+E+QVISRAHRMG    + V+  AM  T EE ML+
Sbjct: 1055 RAAAEGLDLSFVSYVFLMEPLSNMSLEQQVISRAHRMGQKDTVRVKVFAMANTAEEIMLD 1114

Query: 1110 FLQDTDR 1116
               +  R
Sbjct: 1115 VQSELAR 1121


>gi|303280441|ref|XP_003059513.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459349|gb|EEH56645.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 939

 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 145/439 (33%), Positives = 205/439 (46%), Gaps = 108/439 (24%)

Query: 775  SRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWND 834
            SRL  +L R  I   K+D++  PL  +EV  L FT+ HA  YNELV  VRR++L+ADW D
Sbjct: 164  SRLASVLERTTIRTLKSDIRLPPLT-REVRSLRFTKTHAVAYNELVAFVRRSLLLADWAD 222

Query: 835  PSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLV-----ENGLD 889
             SH ESLLNP Q +     +RNLR + CV G   V+   ++I+ET+  LV     + G+ 
Sbjct: 223  ESHRESLLNPAQTRNAKDAVRNLREAACVTGTFPVSCFHDEIEETIVDLVRALTTKKGVA 282

Query: 890  PLSQEYA--FIKYNLLNG-GNCLR--------------HILCLDCVAMDSE--------- 923
              + E     ++Y L +  G C R              H+LC  CVA+  +         
Sbjct: 283  RATAEATANALRYPLFHARGACDRCRRPSFMPFVTPCAHLLCTGCVAVVGDERERGVSST 342

Query: 924  -------------KCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ--W 968
                         +C  P C   + MQ+P    R +NP P+  VPQDLIE+QPSY Q  W
Sbjct: 343  TARDFIHEKRAPRRC--PVCASSFVMQAP--TPRADNPAPRQAVPQDLIEIQPSYVQHAW 398

Query: 969  SNTNTFLKQD-------LYRPNLESNKALPDKVI-------------------------- 995
              T+    Q        L     E   A P++++                          
Sbjct: 399  RMTDALEAQGESTKVRHLLSRLREMGAAAPEEILRAHRPPIAANAEDAAATSEDGGVSAP 458

Query: 996  -----------------------IFSQFLEHIHVIEQQLTVAGIKFAGMYS-PMHSSNKI 1031
                                   ++S F  H+ VI+  LT AG+ F  +    M  + + 
Sbjct: 459  APAPPLPPSLWRRVGVGAPAKVIVYSGFRTHLDVIDLGLTGAGVDFVNIARMGMTRAQRD 518

Query: 1032 KSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRP 1091
             +L  FR D     LL+D +A+ GLDLSF + VF+MEP+ + ++E+QV+SRAHRMG  R 
Sbjct: 519  AALAAFRGDPDVAVLLLDRAAAEGLDLSFASVVFVMEPLDNTALEQQVVSRAHRMGQRRA 578

Query: 1092 IHVETLAMRGTVEEQMLEF 1110
            + VE LAMR T EE +L+ 
Sbjct: 579  VKVEVLAMRETAEETLLDV 597



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 61/89 (68%), Gaps = 1/89 (1%)

Query: 681 SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT-PNSQLSHL 739
           SP+++VHW R++ DEGH LG   ++T KL MA +L +  RW++TGTPTP T   + +++L
Sbjct: 3   SPLLRVHWQRIVFDEGHQLGVCASITQKLSMACALKSHARWVMTGTPTPATLKGTGVAYL 62

Query: 740 QPMLKFLHEEAYGQNQKAWDGGILRPFEA 768
           QP+L FL +  +G +++ W   I RP +A
Sbjct: 63  QPLLAFLRQPPFGNSRELWMSAIQRPLQA 91


>gi|414878661|tpg|DAA55792.1| TPA: hypothetical protein ZEAMMB73_413747 [Zea mays]
          Length = 146

 Score =  191 bits (484), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 90/137 (65%), Positives = 112/137 (81%)

Query: 1018 FAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEE 1077
            F G+     +S +  +L  F+ D +C+AL+MDG+A+LGLDLSFVTRVFLMEPIWDRSMEE
Sbjct: 10   FYGLSGCCCNSMQRSALTKFQEDPTCMALVMDGTAALGLDLSFVTRVFLMEPIWDRSMEE 69

Query: 1078 QVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHR 1137
            QVISRAHRMGATRPIHVETLAMRGT+EEQML+ LQD++ CR+++ +     + EG RSHR
Sbjct: 70   QVISRAHRMGATRPIHVETLAMRGTIEEQMLKLLQDSNACRKIVDKRTGSTDNEGGRSHR 129

Query: 1138 TLHDFAESNYLSHLSFV 1154
            +LHDFAES+YL+ LS V
Sbjct: 130  SLHDFAESSYLAQLSSV 146


>gi|412989009|emb|CCO15600.1| predicted protein [Bathycoccus prasinos]
          Length = 1856

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 189/381 (49%), Gaps = 76/381 (19%)

Query: 660  DYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
            D D++I   + LS+++G  K S   Q+H+ R++LDEGH +G+SL L+N+  +  +L +  
Sbjct: 791  DKDIIILPLSALSSQFGN-KDSAFFQIHFNRIVLDEGHQIGASLALSNRFHVITNLKSHA 849

Query: 720  RWLLTGTPTPNT-PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE--------- 769
            +WL+TGTPTP T   + ++HLQP+L FL +  +  N + +   + RP E           
Sbjct: 850  KWLMTGTPTPATFRGATVAHLQPLLGFLKQSPFDANARLFATLVSRPLEQRNVNNNKKKK 909

Query: 770  ----------MEEGRSR----LLQLLHRCMISARKTDLQTIPLCIKEVTF-LNFTEEHAG 814
                      M   RS     LL+LL R MI   K+ ++  P  ++++T  + FT+EHA 
Sbjct: 910  EENDTDKSVAMIYARSEAARILLELLQRIMIRTCKSHIRLPP--VRKITHSVPFTKEHAL 967

Query: 815  TYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGE 874
            +YN +V  V+R++L+ADW DP+H +SLL+ K  K    T+ NLR + CV G + +T + +
Sbjct: 968  SYNRMVSHVQRSMLLADWFDPNHEQSLLSSKNAKEARQTVVNLREAACVIGDMPLTYSND 1027

Query: 875  DIQETMDVL------------------VENGLDPLSQEYAFI-----KYNLLNGGNCLRH 911
            +I E    L                  + N + P    Y F+         L       H
Sbjct: 1028 EIDEAEQDLSAHLKAKLNMTDAVKIQGMINRVIPAMTRYEFVCDVCGILAYLPMVTPCAH 1087

Query: 912  ILCLDCVAMDS---------------EKCSLPG------CGFLYEMQSPEILTRPENPNP 950
            +LC++CV   S               ++   P       CG  Y+MQ  E   R +NP P
Sbjct: 1088 VLCVECVQNKSTMMKGGNDDDNDDDAKRVRRPAPRGCAKCGIPYKMQ--EATPREDNPMP 1145

Query: 951  KWPVPQDLIELQPSY--RQWS 969
              PVPQDLIELQ SY  R W+
Sbjct: 1146 CQPVPQDLIELQCSYVQRGWT 1166



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 63/128 (49%), Positives = 82/128 (64%), Gaps = 2/128 (1%)

Query: 983  NLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHS-SNKIKSLDMFRHDA 1041
            + ++ K LP K+++FS F  H+HV++  LT   +    +    +S   K  +L  FR D 
Sbjct: 1265 SFDATKKLP-KIVVFSSFKTHLHVVDVCLTEGRVPLQSLSRQGYSREQKDAALSQFRDDP 1323

Query: 1042 SCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRG 1101
             C  LL+D SA+ GLDLSFV RVFLMEP+ + S+EEQVISRAHRMG    +HVE L  RG
Sbjct: 1324 DCPVLLLDRSAAEGLDLSFVNRVFLMEPLENVSLEEQVISRAHRMGQQSIVHVEVLVARG 1383

Query: 1102 TVEEQMLE 1109
            T EE MLE
Sbjct: 1384 TAEETMLE 1391



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 15/147 (10%)

Query: 144 RIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAE--VLRHPLYIDL----- 196
           R+    +  R +     P +KL L PHQ+AA+ WM  RE      V+  P +++L     
Sbjct: 245 RLQCVSKGFRAVMDQTSPGLKLTLHPHQRAALAWMRMRERRDSLGVVLEPGWVELFASND 304

Query: 197 -----ATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGT 251
                   + F FY+ T +G ++        D  GG  CDEPGLGKT+T  +LIL T+G+
Sbjct: 305 DDDENGNREEFPFYMQTSTGILSRTPPNYFSDSCGGALCDEPGLGKTVTVCALILATRGS 364

Query: 252 LADPPDGVKIIW---CTHNGDPRCGYY 275
            A PP G+ I +      N + +  YY
Sbjct: 365 YAPPPKGLTIKFEHPEKENMEEKVPYY 391


>gi|326426459|gb|EGD72029.1| hypothetical protein PTSG_00045 [Salpingoeca sp. ATCC 50818]
          Length = 1978

 Score =  173 bits (439), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 170/566 (30%), Positives = 256/566 (45%), Gaps = 76/566 (13%)

Query: 609  RLYLSR--ATLIVVPS-YLVDHWKTQI-----QQHVRPGQLHLFVWTDHKKPSA------ 654
            R Y+ R  ATL++VP   LV HW+ Q+     Q+      L L V      P+A      
Sbjct: 1336 RQYMPRLNATLVLVPDDSLVRHWEHQVDKFCSQREYLGRALFLTVGEGVDFPAAIVEEER 1395

Query: 655  HSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVH-WLRVMLDEGHTLGSSLNLTNKLQMAI 713
             ++A +  VV       S          M+  H W R++LDEGH +G  LN+ N    AI
Sbjct: 1396 EAVAVNGLVVAPVSMVQSILSHDHPLHGMLFRHRWRRLVLDEGHIMGRGLNVRNAAIAAI 1455

Query: 714  SLTASNRWLLTGTPTPNTP-NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME- 771
                   W +TGTPTP     S LSHL+ ML+FL       + +AW  G++ PF  E   
Sbjct: 1456 QADII--WCMTGTPTPQVAVRSGLSHLEKMLQFLRFPCL-VDTEAWRRGVMVPFNKEHSV 1512

Query: 772  EGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMAD 831
            E  +RL+ LL   MI  +K +L+ +P  ++ V  L  +      YN  V +V+ N+++  
Sbjct: 1513 ETCARLMHLLSHMMILHQKKELRHLPRPVRRVAVLEASRLERDAYNGYVASVKTNLVLTG 1572

Query: 832  WNDPSH--VESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMD-VLVENGL 888
                +    +SLL  +        ++++RL CC  G    T       E MD +L ++GL
Sbjct: 1573 MKGRTSGAQDSLL--RDTSRAKAVLQHMRLVCC-GGLFCTTRIKPAYMEEMDQMLAQHGL 1629

Query: 889  DPLSQEYAFIKYNLLNGGNC--------------LRHILCLDCVAMDSEKCSL------- 927
            D   +++   ++ +     C                H+ C  C+  ++ +C +       
Sbjct: 1630 DEERRQHVRSRFVMGQATPCDLCERKLLILIVLPCSHMCCASCITSETRECPVCKLEFDV 1689

Query: 928  -------PGCGFLYEMQSPEILTRPENPNPKWPVPQDLIEL-------QPSYRQWS-NTN 972
                   PG G      SP        P    P P+ L +        +   RQ+    N
Sbjct: 1690 DFVQRLQPGVGLEATTSSPREAMAGFVPTSLPPPPEHLSDADQRKFLEEEGKRQFELKMN 1749

Query: 973  TFLKQDLYR-----PNLE-SNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMH 1026
            T  +  L R       LE  NK L  KVI+FSQF + +++I   +    I+  G  S   
Sbjct: 1750 TKAQHVLKRLREWQDELEPENKQL--KVIVFSQFRDTLNIIGDAI----IRTYGSQSVAE 1803

Query: 1027 --SSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAH 1084
              SS ++  L+ FR  A+C  LL+    ++GLDL FVT + LM+ I+DR+ EEQVI+RA 
Sbjct: 1804 YWSSYRVGELERFRTQAACKVLLLSTDGAVGLDLHFVTHLVLMDEIFDRAKEEQVIARAW 1863

Query: 1085 RMGATRPIHVETLAMRGTVEEQMLEF 1110
            R+G  R + VE L +RGTVEE + E 
Sbjct: 1864 RLGNDRSVVVEQLILRGTVEETLHEL 1889



 Score = 43.9 bits (102), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 2/52 (3%)

Query: 197 ATEDGF-YFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILK 247
           ++E G  + Y++ VSG++ T    +M    GGM CD PGLGKT++ L+L+L+
Sbjct: 637 SSEPGIGHVYMHCVSGEL-TQAPVSMMLPRGGMLCDGPGLGKTVSVLALLLR 687


>gi|449017681|dbj|BAM81083.1| similar to RING finger-like protein [Cyanidioschyzon merolae strain
           10D]
          Length = 1461

 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 100/260 (38%), Positives = 153/260 (58%), Gaps = 9/260 (3%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVR-PGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
           TL+ +P  L+ HW  QI++ VR P +L   +++  +      +A DYDVV  + N L +E
Sbjct: 660 TLVALPENLIPHWTVQIRRLVRAPHELRYCLFSQIRNAVVREIA-DYDVVFISLNELRSE 718

Query: 675 WGR--RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
           +    R  S + +V+WLR+++DEGH+LGS L+ T+  +  + + A  RW++TGTPTP T 
Sbjct: 719 YSSLVRGLSILNRVYWLRMIIDEGHSLGS-LSCTSLQRCCLIVLAERRWIMTGTPTPTTK 777

Query: 733 N--SQLSHLQPMLKFLHEEAYGQNQKA-WDGGILRPFEAEME-EGRSRLLQLLHRCMISA 788
           +  +++ HL P+  FL  E +   ++A +   + RP E  +  EG   L Q L   MI +
Sbjct: 778 SGIAEVHHLYPLFSFLGLEPFVWARRAVFQQCVQRPLERALGYEGIHILQQTLDHIMIRS 837

Query: 789 RKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWK 848
            K ++Q IP        L+FT+E A  YN LV  V+RN+ +AD+ D +H ESLLNP+  K
Sbjct: 838 TKEEVQDIPHLEVRDEMLSFTKEEADAYNALVSVVKRNLFLADFFDENHRESLLNPENRK 897

Query: 849 FRSTTIRNLRLSCCVAGHIK 868
                ++NLRL CCV GH+K
Sbjct: 898 SARVVLQNLRLCCCVTGHMK 917



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 107/232 (46%), Gaps = 47/232 (20%)

Query: 911  HILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ--- 967
            HI CLDC A +   C++  CG  Y      +L R + P        DLIE+QPS+ Q   
Sbjct: 1155 HIQCLDCAATNRYACNI--CGRKY------VLGRRQEP-------VDLIEMQPSFTQEAW 1199

Query: 968  ---WSNTNT--------FLKQDLYRPNLESNKALP------------------DKVIIFS 998
               W    T         L +        S +  P                  +KVII+S
Sbjct: 1200 VPRWDRKMTSKIARMLQLLGEWSSATYTASREGAPCSDQGGNSRQSCVAHGKREKVIIYS 1259

Query: 999  QFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDL 1058
             F  H  VI   L      FA   S +  + +   +D F +D     LLMD   +LGLDL
Sbjct: 1260 NFAHHFDVIHYHLCQGNFDFAYYCSRLSPTERRAQIDRFIYDPHTWILLMDEKGALGLDL 1319

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            SFVTR+ +MEP+W+RS E Q+ISRAHR+GA + + V  L M  +VE  +++ 
Sbjct: 1320 SFVTRMIIMEPVWNRSQEHQIISRAHRIGAKQRVIVYRLMMVDSVETDLIDM 1371



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 16/149 (10%)

Query: 118 CSTGISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEW 177
           CS+ +  + +++++ I        ++ +       RCL   I+P + ++LF HQQAAV W
Sbjct: 260 CSS-LQTLPENVLVQIFQHTDSPTILALGQLSSWFRCLTNPIVPELNVELFKHQQAAVLW 318

Query: 178 MLHREWNAE----------VLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGG 227
           ML RE + E            ++PL   L   DG   Y N +   +    + T  D  GG
Sbjct: 319 MLSRERHREHRCGPVAPLPQWKNPLLQHL---DG-DLYFNWMHRRLERNQS-TCYDCRGG 373

Query: 228 MFCDEPGLGKTITALSLILKTQGTLADPP 256
           + CDEPGLGKT+TAL+LI +T+ T+   P
Sbjct: 374 LLCDEPGLGKTVTALALIARTRSTIPAIP 402


>gi|357142447|ref|XP_003572575.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            [Brachypodium distachyon]
          Length = 1018

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 152/577 (26%), Positives = 258/577 (44%), Gaps = 105/577 (18%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
              LI+ P  L+  WK +I+ H +P  ++++V     +P   S     D+V+TT+  +++E
Sbjct: 481  GNLIICPMTLLSQWKAEIEAHTKPNTMNIYVHYGQSRPKEASFIGQNDIVLTTYGVVASE 540

Query: 675  WGRRKKSP---MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
            +     +    +  VHW RV+LDE H + SS +L +  Q A +LTA  RW LTGTP  N 
Sbjct: 541  FSTESSTENGGLYSVHWFRVVLDEAHMIKSSKSLIS--QAAAALTADRRWCLTGTPIQN- 597

Query: 732  PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK- 790
                L  +  + +FL  E + +N   W   + +PFE   E G   +  +L R M+   K 
Sbjct: 598  ---NLEDIYSLFRFLRVEPW-RNWALWYKLVQKPFEEGDERGLKLVQTILKRVMLRRTKN 653

Query: 791  -TD-----LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADW---------NDP 835
             TD     + T+P    EV + + +E     Y  L    RR+ +  D          N  
Sbjct: 654  STDKEGRPILTLPPATIEVKYCDLSEPEKDFYEAL---FRRSKVKFDQFVEQGKVLHNYA 710

Query: 836  SHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEY 895
            S +E LL  +Q              CC   H  +  +  D QE  D      L+ L++ +
Sbjct: 711  SILELLLRLRQ--------------CC--DHPFLVMSRGDTQEYAD------LNKLAKRF 748

Query: 896  AFIKYNLLNGGN-------------------------CLR-----------HILCLDCVA 919
                 +++NG +                         CL            H LC +C+ 
Sbjct: 749  LHGGNSVVNGNSSSLPSKAYIEEVVQELQKGEGECPICLEAFEDAVLTPCAHRLCRECIL 808

Query: 920  MDSEKCSLPGCGFLYE-MQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQD 978
               +  +   C    + M   +++T P +   +  V ++ IE        S+  +FL Q+
Sbjct: 809  SSWQSTAAGLCPVCRKSMSKQDLITAPTDSRFQVDVEKNWIE--------SSKISFLLQE 860

Query: 979  LYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR 1038
                 LES ++   K I+FSQ+   + +++  L+  GI FA +   ++   + K +  F 
Sbjct: 861  -----LESLRSSGAKSIVFSQWTAFLDLLQIPLSRHGISFARLDGTLNLQQREKVIKEFS 915

Query: 1039 HDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
             D S L LLM   +  +G++L+  +  F+M+P W+ ++EEQ + R HR+G T+ + ++  
Sbjct: 916  EDKSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKSVSIKRF 975

Query: 1098 AMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
             ++GTVEE+M E +Q   R +R++   L   E   AR
Sbjct: 976  IVKGTVEERM-EAVQ--ARKQRMISGALTDQEVRTAR 1009



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 28/172 (16%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE-----WNAEVLRHPLYIDLATEDG--FYFYVNTVSGDIA 214
            ++  L P+Q+ A+ WML  E      +A    HP +     ED      YVN  SGD  
Sbjct: 333 ALQCDLRPYQKQALHWMLQLEKGSSSQDAATTLHPCWEAYKLEDKRELVLYVNVFSGDAT 392

Query: 215 TGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHNGDPRCGY 274
           T    T++   GG+  D  GLGKTI  +SL+L          D  K +  TH+       
Sbjct: 393 TEFPSTLQLARGGILADAMGLGKTIMTISLLLS---------DSSKGLITTHH------- 436

Query: 275 YDLSGDKLTCNNMCLGK-RTFSQNARRRQLSVGKFTPMDDLKCPLLKRARLV 325
                 +++     LG+    SQN  +   S   F+ +  LK PL+    L+
Sbjct: 437 ----STQISREASGLGEIHIKSQNPVKNLASPFSFSKLKKLKTPLVGGGNLI 484


>gi|428174192|gb|EKX43089.1| hypothetical protein GUITHDRAFT_140679 [Guillardia theta CCMP2712]
          Length = 1316

 Score =  166 bits (419), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 168/363 (46%), Gaps = 61/363 (16%)

Query: 604 PLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDV 663
           P   V  + SRATLIVVP  L+ HW  QI  H + G L L   +   +  +       DV
Sbjct: 513 PTKGVVKFPSRATLIVVPGTLLHHWTYQISAHTKRGTLRLHTVSKSSEILSAKDMSRLDV 572

Query: 664 VITTFNRLSAEW-----------------------GR----------------------R 678
           V+TTF+ LS +W                       GR                      R
Sbjct: 573 VLTTFDVLSKQWSLGSPVLGSHRWYQQQRVQSLKQGRYVHDYVGIADFKRKVESAQEETR 632

Query: 679 KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSH 738
             S  ++V W R++LDEGH +G + N TN+  M  ++ AS RW+ TGTPTPN P S+L H
Sbjct: 633 NGSEFLKVKWRRIILDEGHVMGGT-NETNRAMMCSNIDASCRWICTGTPTPNNPGSELMH 691

Query: 739 LQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ---T 795
           L  ++ FL  + +  N   W   ++ PFE+       RL  +L R M  + K D++    
Sbjct: 692 LYGLMCFLRSKPFA-NFDVWRQQVVLPFESFDCSAWVRLHAMLSRSMFRSLKADMERLGE 750

Query: 796 IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIR 855
           IP C  E T +  +      YN LV  +RRN+++A+ +D   ++SLL+ K  K+    I 
Sbjct: 751 IPACKVETTHIRLSRGEQEAYNGLVSIIRRNLILAECDDI-RIDSLLHSKNRKYALEAIS 809

Query: 856 NLRLSCCVAGHIKVTDAGEDIQETMDV------LVENGLDPLSQEYAFIKYNLLN----G 905
           N+R +CCV G  K+      + E+++V      L + G D   + +      +++    G
Sbjct: 810 NMRKACCVTGQFKIAIVKAHLDESVEVMRRGHSLQDKGCDCPGEYFDMNSSKMVDCSDRG 869

Query: 906 GNC 908
           GNC
Sbjct: 870 GNC 872



 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 79/130 (60%), Gaps = 2/130 (1%)

Query: 122 ISDIADDIVISILTRLGPIDLVRIAA-TCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLH 180
           I  + DD+++ +L +L P++ + +AA TCR L     +++P +KL L+ HQ+ AV WML 
Sbjct: 346 IHVLPDDVLVVLLDQLDPLEELSVAAMTCRSLNNAVQNMIPGLKLTLYGHQRRAVAWMLR 405

Query: 181 REWNAEVLRHPLYIDLATEDGFYFYVNTVSG-DIATGTAPTMRDFHGGMFCDEPGLGKTI 239
           RE   E + +P   +  ++ G  FY+N   G  ++      + D  GG  CDEPG+GKTI
Sbjct: 406 RETRPERISNPSVEEFCSKKGKDFYINLCKGVSLSFEAEKEVEDVRGGFLCDEPGMGKTI 465

Query: 240 TALSLILKTQ 249
           T L+LILK++
Sbjct: 466 TVLALILKSR 475



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 107/227 (47%), Gaps = 34/227 (14%)

Query: 911  HILCLDCVAMDSEKCSLPGCGFLYEMQS-----PEILTRPENPNPKW--PVPQDLIELQP 963
            H++CL+CV   + +   P C   + ++S     P +       NP W   +   +  L  
Sbjct: 931  HLICLNCVDATAMRVC-PICARSFSLRSFADFQPSVEQSNMTWNPSWIDDLSSKVALLLV 989

Query: 964  SYRQWSNTNTFLKQDLYRPNL----------ESNKALPD-----KVIIFSQFLEHIHVIE 1008
              R +        Q+++  N             +K+ P      K I++S F+E I  + 
Sbjct: 990  RLRHFGFLQVHKSQEIWWHNKVLRLAKQTRKHESKSPPQRHPAGKCIVYSNFIETIDNVA 1049

Query: 1009 QQLTVAGIKFAGMYSPMHSSNKIK--------SLDMFRHDASCLALLMDGSASLGLDLSF 1060
              ++ A     G  + M  +  +K        ++  FR +     +L+D + +LGLDLSF
Sbjct: 1050 NSISEA---MGGGGNYMRFTANLKRGMLERNDAIQQFRDNPDIQIILIDSAGALGLDLSF 1106

Query: 1061 VTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            VT V+L++PIWD+S E+QVISRAHR+GA   I VE     GTVEE M
Sbjct: 1107 VTHVYLLDPIWDKSQEDQVISRAHRLGAKSSITVEKFIATGTVEEIM 1153


>gi|303270907|ref|XP_003054815.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462789|gb|EEH60067.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1718

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 173/358 (48%), Gaps = 68/358 (18%)

Query: 607  SVRLYLSRATLIVVP-SYLVDHWKTQIQQHV----RPGQLHLFVWTD------------- 648
            +VR++LS ATL++VP + L++HW  Q+  HV    R G+    +W               
Sbjct: 955  AVRIFLSPATLVIVPDAALIEHWIGQVGTHVNAPNRRGEFGPGIWGGPGLDKPLRVLAVG 1014

Query: 649  --HKK------------------------PSAHSLAWDYDVVITTFNRLSAEWGRRKKSP 682
               +K                        P A +LA DYDVV++TF R+S +  R     
Sbjct: 1015 GMSRKEADELSSTTPRAGDPPGVTRAATFPPAETLARDYDVVLSTFERMSNK-TRDAGED 1073

Query: 683  MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSH---- 738
            +++VH+LR+++DEGH LGS    T ++Q   ++ A  RW++TGTP P   +         
Sbjct: 1074 ILRVHFLRLIVDEGHLLGSIGAETTRVQRVRAVRAERRWMMTGTPAPAVQHGGGGGEASY 1133

Query: 739  -------------------LQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ 779
                               L P+L  +    +G ++  W   +L+P + +  EG   L +
Sbjct: 1134 GQTVCPRDAAAAPHRAAAALHPLLDLIRAAPFGSSRALWADAVLKPLQFKKVEGAWILRR 1193

Query: 780  LLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVE 839
             L R ++ A K +L  +P   +    + FT  HA ++N+L   VRRN+LMADWNDP H E
Sbjct: 1194 ALSRLVVRASKAELGLLPPLTRRAVRVPFTPSHAASFNQLANLVRRNLLMADWNDPDHQE 1253

Query: 840  SLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAF 897
            SLL+ ++ ++      N+R +CCVAG +++    ED+ E + ++ +    P  + + F
Sbjct: 1254 SLLHVRRSQYARELYLNVRKACCVAGAVRLAPQEEDLCEMLVLICQRRGLPTPEAWDF 1311



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 62/101 (61%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K +++S F EH+ +I  +L   G+  A M     +S K   L+ FRHD +C  L+MD S 
Sbjct: 1604 KAVVYSAFWEHVALIRARLRAEGVPHATMLRHERASIKASELERFRHDPTCGVLVMDTSG 1663

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIH 1093
             +GLDLSF + V  MEP+ D S+  Q+ +RAHRMG  RPIH
Sbjct: 1664 VVGLDLSFASLVIAMEPVPDGSVLAQLEARAHRMGQARPIH 1704



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 41/152 (26%)

Query: 142 LVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNA--EVLRHP-------- 191
           L R+AATCR LR  A    P +   LFPHQ+ A+  ++ RE     +++ HP        
Sbjct: 356 LARVAATCRLLRDAARETAPGLLCTLFPHQRDALRALVAREAGGCGKLVPHPGLRRVVAQ 415

Query: 192 ----------------------LYIDLATEDGFYFYVNTVSGDIATGTAPT--MRDFHGG 227
                                 L +D+  +DG YF      G    G  P     D  GG
Sbjct: 416 RRGDDANSKTKAAEGPPYEAWVLTVDM--KDGAYF-----PGAFHAGPRPPSMYADVRGG 468

Query: 228 MFCDEPGLGKTITALSLILKTQGTLADPPDGV 259
           +F D+PGLGK++TAL+L+L+++GTL  PP G 
Sbjct: 469 VFADDPGLGKSVTALALVLRSRGTLPSPPPGA 500



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 5/106 (4%)

Query: 435 WVQCDA--CHKWRKLLDASVADATAA-WFCSMNSDPTHQSCGDPEEAWDNCQSITYLPGF 491
           W++CD   C KWR+L   S A +    W+C MN DP + SC  P+E  D  + I+   G 
Sbjct: 622 WIKCDEDDCEKWRRLPPGSAAPSGEGRWYCQMNPDPRYNSCQAPQEPDDPEEVISLEVGC 681

Query: 492 HAKGTSD-GKKQNVSFFISVLKEHYL-LINSMTKKALTWLAKLSPD 535
           + KG  + G+++NV  F  +L++ Y   IN++    +  L+ ++ D
Sbjct: 682 YEKGKEEPGQERNVRHFYEILRQTYKEAINAVKPGDMRGLSMITSD 727



 Score = 46.6 bits (109), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 18/92 (19%)

Query: 890  PLSQEYAFIKYNLLNGGNCLR---------------HILCLDCVAMDSEKCSLPGCGFLY 934
            P S   + ++  + NGG+C                  +LC  C       C+   C   Y
Sbjct: 1401 PPSHPLSRLEDVVRNGGDCASCATRVNVSLTPPCGCGVLCPSCAERSPRTCAK--CNTPY 1458

Query: 935  EMQSPEILTR-PENPNPKWPVPQDLIELQPSY 965
            EMQ  E  +R   N NPKW VP++LIE QP+Y
Sbjct: 1459 EMQPVEDPSRKAHNDNPKWAVPRELIEWQPAY 1490


>gi|298707957|emb|CBJ30328.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 674

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 180/363 (49%), Gaps = 41/363 (11%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW---TDHKKPSAHSLAWDYDVVIT 666
           L  S ATLIVVP  ++ HW+ Q+  H   G+L    +   +D + P    L  D+ VV+T
Sbjct: 318 LKASSATLIVVPPPMLPHWRNQLTLHAEHGRLGSVFFDERSDTRLPPVDELK-DFGVVVT 376

Query: 667 TFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           T+ RL+ E      SP+ ++HWLR++LDEGH +G+S  +T+   +A  + A  RW++TGT
Sbjct: 377 TYQRLTNEQPGWSDSPLSRIHWLRMVLDEGHAMGTSA-MTSCGDVARRIEAERRWVMTGT 435

Query: 727 PTPNT-PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCM 785
           PTP T  ++ L +L  +L  L E+ Y      W   +  PF A   EGR RL +LL   M
Sbjct: 436 PTPTTSADAALRNLSNLLNLLREKEYSPE---WRRNVRGPFIANKPEGRERLRRLLSEVM 492

Query: 786 ISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILM-------ADWNDPSHV 838
           I   K DL +IP  ++E   LN +++    Y+ +V  VR N+L+       + W D    
Sbjct: 493 IRHTKADLLSIPPPVRESALLNMSQQETLAYDTIVSFVRSNLLLTSMEGKTSGWQD---- 548

Query: 839 ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVE----NGLDPLSQE 894
            SLLNP   K+    + N+RLSCC  G +     G    ET+ +L +    + +D    +
Sbjct: 549 -SLLNPANTKYAMEALTNIRLSCCGGGTLIPMVKGIHQVETLHMLRDLHDASAVDLRRID 607

Query: 895 YAFIKYNLLNGGNC--------------LRHILCLDCVAMDSEKCSLPGCGFLYEMQSPE 940
               +  +    +C                H++C+DCV   +  C +  CG  Y++   +
Sbjct: 608 NFITRATMGEVSSCQGCGEPLQLLHITPCTHLICVDCVDCVNNTCRV--CGSRYDIDDFQ 665

Query: 941 ILT 943
           + T
Sbjct: 666 VRT 668



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 31/49 (63%)

Query: 204 FYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTL 252
            ++N V G +         +  GGM CDEPGLGKTIT L+L+L+T+G L
Sbjct: 69  LWINVVDGMVWPSAPAPCSEVRGGMLCDEPGLGKTITVLALLLRTRGLL 117


>gi|310795289|gb|EFQ30750.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001]
          Length = 903

 Score =  157 bits (398), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 164/594 (27%), Positives = 275/594 (46%), Gaps = 80/594 (13%)

Query: 590  LAFDLAALRLALCEPLDSVRLYLSRA---TLIVVPSYLVDHWKTQIQQHVRPGQL-HLFV 645
            L+  L A  + L + L  + L L+     TLIV P  ++ +WK QI +HV+   L  +F 
Sbjct: 348  LSGGLLADDMGLGKTLQVISLILTGGPGPTLIVAPLSVMSNWKQQIHRHVKQEHLPKIFT 407

Query: 646  WTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRK-KSPM---MQVHWLRVMLDEGHTLGS 701
            +    + + + LA  Y VVIT++N+L+ E G+ K ++PM   M  +W RV+LDEGH + +
Sbjct: 408  YHGSNRATKNELA-QYQVVITSYNKLATEGGKEKNETPMGSLMATNWRRVVLDEGHIIRN 466

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
            +   T     A  L A +RW+LTGTP  N     +   Q +L+FL      +    ++  
Sbjct: 467  A--KTKAAVAARKLNAQSRWVLTGTPIINN----VKDFQSLLQFLSITGGVEQPAIFNTV 520

Query: 762  ILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTI----PLCIKEVTFLNFTEEHAGTYN 817
            I RP  A+ ++    LLQLL R +   RK D++ I    P+  + +  + F  +    Y+
Sbjct: 521  IARPL-AQGDKTAEALLQLLMRDLCLRRKKDMKFIDLKLPMKKEYIHRIAFRPDEKRKYD 579

Query: 818  ELVVTVRRNILMADWNDPSH---------VESLLNPKQ----WKFRSTTIRNLRLSCCVA 864
             L+   +  + + D+   +          +E LL  +Q    W      I +L     + 
Sbjct: 580  ALLSEAQ--VALKDYQANASGVKGQFQNVLERLLRLRQVCNHWTLCRKRIDDLL--AALE 635

Query: 865  GHIKVTDAGEDI---QETMDVLVENGLDPLSQEYAFIKYNLLNG---GNCLRHILCLDCV 918
            G   V    E+I   QE + + +E      +QE   +  + LN     +C +H+ C  C+
Sbjct: 636  GQSVVALNSENIKILQEALRLYIE------TQEDCAVCLDTLNNPVITHC-KHVFCRGCI 688

Query: 919  AMDSE---KCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSY---RQWSNTN 972
            +   E   KC  P C    ++    +L          P P+   E   ++    + S T 
Sbjct: 689  SKVIEAQHKC--PMC--RNQLGEDALLE---------PAPEGGEENDENFDGDAKSSKTE 735

Query: 973  TFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIK 1032
              LK  + +   +  K+   KVIIFSQ+   + +I+ QL  AG KFA +   M +S +  
Sbjct: 736  ALLK--ILQATTKDPKS---KVIIFSQWTSFLTIIQNQLVEAGYKFARIDGSMTASKRDA 790

Query: 1033 SLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRP 1091
            ++    HD     +L      S+GL+L     V L +  W  ++E+Q + R HR+G  RP
Sbjct: 791  AIHALDHDPDTRVMLASLAVCSVGLNLVAADTVILADSWWAPAIEDQAVDRVHRLGQKRP 850

Query: 1092 IHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRT-LHDFAE 1144
              V  L M GTVEE++L+   +    +R L  +  + + +G ++  T + D A+
Sbjct: 851  TTVWRLVMEGTVEERVLDIQHE----KRTLVGKAFQEKNKGKKTQETRMADIAK 900


>gi|301615850|ref|XP_002937382.1| PREDICTED: helicase-like transcription factor [Xenopus (Silurana)
            tropicalis]
          Length = 956

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 240/529 (45%), Gaps = 63/529 (11%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TLI+ P  ++ +W  Q +QH++P   L+++++   ++     +  D DVV+TT++ LS
Sbjct: 423  RTTLIICPLSVLSNWIDQFEQHIKPEVHLNIYIYYGPERTKDPKVLSDQDVVVTTYSVLS 482

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            +++G R +SP+ +V WLRV+LDEGHT+ +      + Q  +SL A  RW+LTGTP  N+ 
Sbjct: 483  SDYGSRSESPLHKVKWLRVVLDEGHTIRNP--NAQQTQAVLSLEAQRRWILTGTPIQNS- 539

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT- 791
               L  L  ++ FL  + +  +++ W   I RP     + G  RL  L+    +   KT 
Sbjct: 540  ---LKDLWSLICFLKLKPF-TDREWWHRTIQRPVTTGEDGGLCRLQALIKNITLRRTKTS 595

Query: 792  --------DLQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRRNILMADWNDPSHVE 839
                    DL    + I+ V     +EE    Y    NE    + R +  ++    SH  
Sbjct: 596  KIRGRPVLDLPERKVFIQHV---ELSEEERQIYESLKNEGKAVISRYV--SEGTILSHYA 650

Query: 840  SLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIK 899
             +L           +  LR  CC      V+ A   I  T D    +  + L Q+   + 
Sbjct: 651  DVL---------AVLVRLRQLCC--HPFLVSSALSSITTTADSTPGDVREKLVQKIKLV- 698

Query: 900  YNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLI 959
               L+ G+     +CLD + M      +  C  ++       + + E    K P+ +  +
Sbjct: 699  ---LSSGSDEECAICLDSLNMP----VITYCAHVFCKPCICQVIQHEKQEAKCPLCRGSL 751

Query: 960  ELQ-----PSYRQWSNTNTFLKQD----------LYRPNLESNKALPDKVIIFSQFLEHI 1004
             L      P     S+ N  L+Q+          ++    +  K    K I+ SQF   +
Sbjct: 752  RLDQLVECPQEDLDSSINKKLEQNWMCSTKINALMHALVDQRRKDATVKSIVVSQFTSFL 811

Query: 1005 HVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF-RHDAS--CLALLMDGSASLGLDLSFV 1061
             VIE  L  +G  F  +   M    + +++  F R DA    + LL   +  +GL+L+  
Sbjct: 812  SVIEVALRESGFMFTRLDGSMTQKKRTEAIQSFQRPDAQSPTIMLLSLKAGGVGLNLTAA 871

Query: 1062 TRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +RVFLM+P W+ + EEQ   R HR+G T+ + V    +R +VEE ML+ 
Sbjct: 872  SRVFLMDPAWNPAAEEQCFDRCHRLGQTKKVIVTKFVVRNSVEENMLKI 920


>gi|255573018|ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricinus communis]
 gi|223533174|gb|EEF34931.1| DNA repair helicase rad5,16, putative [Ricinus communis]
          Length = 1028

 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 150/580 (25%), Positives = 256/580 (44%), Gaps = 98/580 (16%)

Query: 609  RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
            ++ ++   L++ P  L+  WK +I+ H +PG L ++V     +     L   YDVVITT+
Sbjct: 484  KILVNGGNLLICPMTLLGQWKAEIETHTQPGSLSVYVHYGQSRARDAKLLSQYDVVITTY 543

Query: 669  NRLSAEWGRRK---KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI---SLTASNRWL 722
              L++E+          +  V W RV+LDE HT+ SS     K Q++I   +L A  RW 
Sbjct: 544  GVLASEFSAENAEDNGGLYTVQWFRVVLDEAHTIKSS-----KSQISIAAAALVADRRWC 598

Query: 723  LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
            LTGTP  N     L  +  +L+FL  E + ++   W+  + +PFE   E G   L  +L 
Sbjct: 599  LTGTPIQNN----LEDIYSLLRFLKVEPW-ESWAWWNKLVQKPFEEGDERGLKLLQSILK 653

Query: 783  RCMISARK--TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDP 835
              M+   K  TD +  P+ +      +V +   TE     Y  L    R  +    + + 
Sbjct: 654  PIMLRRTKSTTDREGRPILVLPPADIQVIYCELTEAERDFYEALF--KRSKVKFNQFVEQ 711

Query: 836  SHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEY 895
              V  L N     + S     LRL  C      V   G D QE  D      L+ L++ +
Sbjct: 712  GRV--LHN-----YASILELLLRLRQCCDHPFLVMSRG-DTQEYSD------LNKLAKRF 757

Query: 896  AFIKYNLLNG-----------------------GNC--------------LRHILCLDCV 918
                 N+L G                       G C                H LC +C+
Sbjct: 758  LKGGQNMLEGEARDVPSRAYVEEVVEELRKGDQGECPICLEAFEDAVLTLCAHRLCRECL 817

Query: 919  AM---DSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFL 975
                 +S     P C  +   Q  E++T P +   +       I+++ ++ + S     L
Sbjct: 818  LASWRNSTSGLCPVCRKIVTRQ--ELITAPTDSRFQ-------IDIEKNWVESSKVIVLL 868

Query: 976  KQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLD 1035
            ++      LE+ ++   K I+FSQ+   + +++  L+ +GI +  +   ++   + + + 
Sbjct: 869  QE------LENLRSSGSKSILFSQWTAFLDLLQIPLSRSGISYVRLDGTLNQQQRERVIK 922

Query: 1036 MFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
             F  D S L LLM   +  +G++L+  +  F+M+P W+ ++EEQ + R HR+G T+P+ +
Sbjct: 923  QFSEDDSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKPVMI 982

Query: 1095 ETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            +   ++GTVEE+M E +Q   R +R++   L   E   AR
Sbjct: 983  KRFIVKGTVEERM-EAVQ--ARKQRMVSGALTDQEVRTAR 1019



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 7/91 (7%)

Query: 163 MKLKLFPHQQAAVEWMLHREWN-----AEVLRHPLY--IDLATEDGFYFYVNTVSGDIAT 215
           ++ +L P+Q+ A++WM   E            HP +    LA +     Y+NT SGD   
Sbjct: 342 LQCELRPYQKQALQWMYQLEKGKYTDEGATALHPCWEAYHLADQRQLVVYLNTFSGDATV 401

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
               T++   GG+  D  GLGKTI  +SL+L
Sbjct: 402 EFPSTLQMARGGILADSMGLGKTIMTISLLL 432


>gi|115446443|ref|NP_001047001.1| Os02g0527100 [Oryza sativa Japonica Group]
 gi|49388292|dbj|BAD25407.1| putative DNA repair protein rad8 [Oryza sativa Japonica Group]
 gi|113536532|dbj|BAF08915.1| Os02g0527100 [Oryza sativa Japonica Group]
          Length = 810

 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 150/579 (25%), Positives = 250/579 (43%), Gaps = 104/579 (17%)

Query: 612  LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            ++   LIV P  L+  WK +I+ H  PG + ++V     +P   +L    D+V+TT+  L
Sbjct: 271  IAGGNLIVCPMTLLGQWKAEIEAHATPGSVSIYVHYGQNRPKEANLIGQSDIVLTTYGVL 330

Query: 672  SAEWGRRKKSP---MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            S+E+     +    +  +HW RV+LDE H + S  +L +    A +LTA  RW LTGTP 
Sbjct: 331  SSEFSNENSTESGGLYSIHWFRVVLDEAHMIKSPKSLIS--LAAAALTADRRWCLTGTPI 388

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N     L  +  + +FL  E + +N   W   + +P+E   E G   +  +L   M+  
Sbjct: 389  QNN----LEDIYSLFRFLRVEPW-RNWSLWHKLVQKPYEEGDERGLKLVQSILKPIMLRR 443

Query: 789  RK--TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMADW--------- 832
             K  TD +  P+ I      EV + + +E     Y+ L    RR+ +  D          
Sbjct: 444  NKNSTDKEGRPILILPPANIEVKYCDLSETEKDFYDAL---FRRSKVKFDQFVEQGRVLH 500

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLS 892
            N  S +E LL  +Q              CC   H  +  +  D QE  D      L+ L+
Sbjct: 501  NYASILELLLRLRQ--------------CC--DHPFLVLSRGDTQEFAD------LNKLA 538

Query: 893  QEYAFIKYNLLNGGNCL-----------------------------------RHILCLDC 917
            + +       +NG + L                                    H LC +C
Sbjct: 539  KRFLHGGNGAVNGDSSLPSRAYIEEVVQELQKGEGECPICLEAFEDAVLTPCAHRLCREC 598

Query: 918  VAMDSEKCSLPGCGFLYE-MQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLK 976
            +       S   C    + M   +++T P +   +  V ++ +E        S+  +FL 
Sbjct: 599  LLSSWRSASAGLCPVCRKSMSKQDLITAPTDNRFQIDVEKNWVE--------SSKISFLL 650

Query: 977  QDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDM 1036
            Q+     LE  +    K IIFSQ+   + +++  L+     FA +   ++   + K +  
Sbjct: 651  QE-----LEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLDGTLNLQQREKVIKE 705

Query: 1037 FRHDASCLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            F  D S L LLM   A  +G++L+  +  F+M+P W+ ++EEQ I R HR+G T+ + ++
Sbjct: 706  FSEDKSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAIMRIHRIGQTKSVSIK 765

Query: 1096 TLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
               ++GTVEE+M E +Q   R +R++   L   E   AR
Sbjct: 766  RFIVKGTVEERM-EAVQ--ARKQRMISGALTDQEVRSAR 801



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE-----WNAEVLRHPLYIDLATEDG--FYFYVNTVSGDIA 214
            ++  L P+Q+ A  WM+  E      +A    HP +     ED      Y+N  SGD  
Sbjct: 126 ALQCDLRPYQKQAFYWMMQLEKGSSSQDAATTLHPCWEAYKLEDKRELVLYLNVFSGDAT 185

Query: 215 TGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           T    T++   GG+  D  GLGKTI  ++L+L
Sbjct: 186 TEFPSTLQLARGGILADAMGLGKTIMTIALLL 217


>gi|215693288|dbj|BAG88670.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 607

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 150/579 (25%), Positives = 250/579 (43%), Gaps = 104/579 (17%)

Query: 612  LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            ++   LIV P  L+  WK +I+ H  PG + ++V     +P   +L    D+V+TT+  L
Sbjct: 68   IAGGNLIVCPMTLLGQWKAEIEAHATPGSVSIYVHYGQNRPKEANLIGQSDIVLTTYGVL 127

Query: 672  SAEWGRRKKSP---MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            S+E+     +    +  +HW RV+LDE H + S  +L +    A +LTA  RW LTGTP 
Sbjct: 128  SSEFSNENSTESGGLYSIHWFRVVLDEAHMIKSPKSLIS--LAAAALTADRRWCLTGTPI 185

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N     L  +  + +FL  E + +N   W   + +P+E   E G   +  +L   M+  
Sbjct: 186  QNN----LEDIYSLFRFLRVEPW-RNWSLWHKLVQKPYEEGDERGLKLVQSILKPIMLRR 240

Query: 789  RK--TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMADW--------- 832
             K  TD +  P+ I      EV + + +E     Y+ L    RR+ +  D          
Sbjct: 241  NKNSTDKEGRPILILPPANIEVKYCDLSETEKDFYDAL---FRRSKVKFDQFVEQGRVLH 297

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLS 892
            N  S +E LL  +Q              CC   H  +  +  D QE  D      L+ L+
Sbjct: 298  NYASILELLLRLRQ--------------CC--DHPFLVLSRGDTQEFAD------LNKLA 335

Query: 893  QEYAFIKYNLLNGGNCL-----------------------------------RHILCLDC 917
            + +       +NG + L                                    H LC +C
Sbjct: 336  KRFLHGGNGAVNGDSSLPSRAYIEEVVQELQKGEGECPICLEAFEDAVLTPCAHRLCREC 395

Query: 918  VAMDSEKCSLPGCGFLYE-MQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLK 976
            +       S   C    + M   +++T P +   +  V ++ +E        S+  +FL 
Sbjct: 396  LLSSWRSASAGLCPVCRKSMSKQDLITAPTDNRFQIDVEKNWVE--------SSKISFLL 447

Query: 977  QDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDM 1036
            Q+     LE  +    K IIFSQ+   + +++  L+     FA +   ++   + K +  
Sbjct: 448  QE-----LEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLDGTLNLQQREKVIKE 502

Query: 1037 FRHDASCLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            F  D S L LLM   A  +G++L+  +  F+M+P W+ ++EEQ I R HR+G T+ + ++
Sbjct: 503  FSEDKSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAIMRIHRIGQTKSVSIK 562

Query: 1096 TLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
               ++GTVEE+M E +Q   R +R++   L   E   AR
Sbjct: 563  RFIVKGTVEERM-EAVQ--ARKQRMISGALTDQEVRSAR 598


>gi|222622979|gb|EEE57111.1| hypothetical protein OsJ_06974 [Oryza sativa Japonica Group]
          Length = 1028

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 149/579 (25%), Positives = 250/579 (43%), Gaps = 104/579 (17%)

Query: 612  LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            ++   LIV P  L+  WK +I+ H  PG + ++V     +P   +L    D+V+TT+  L
Sbjct: 489  IAGGNLIVCPMTLLGQWKAEIEAHATPGSVSIYVHYGQNRPKEANLIGQSDIVLTTYGVL 548

Query: 672  SAEWGRRKKSP---MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            S+E+     +    +  +HW RV+LDE H + S  +L +    A +LTA  RW LTGTP 
Sbjct: 549  SSEFSNENSTESGGLYSIHWFRVVLDEAHMIKSPKSLIS--LAAAALTADRRWCLTGTPI 606

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N     L  +  + +FL  E + +N   W   + +P+E   E G   +  +L   M+  
Sbjct: 607  QN----NLEDIYSLFRFLRVEPW-RNWSLWHKLVQKPYEEGDERGLKLVQSILKPIMLRR 661

Query: 789  RK--TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMADW--------- 832
             K  TD +  P+ I      EV + + +E     Y+ L    RR+ +  D          
Sbjct: 662  NKNSTDKEGRPILILPPANIEVKYCDLSETEKDFYDAL---FRRSKVKFDQFVEQGRVLH 718

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLS 892
            N  S +E LL  +Q              CC   H  +  +  D QE  D      L+ L+
Sbjct: 719  NYASILELLLRLRQ--------------CC--DHPFLVLSRGDTQEFAD------LNKLA 756

Query: 893  QEYAFIKYNLLNGGNCL-----------------------------------RHILCLDC 917
            + +       +NG + L                                    H LC +C
Sbjct: 757  KRFLHGGNGAVNGDSSLPSRAYIEEVVQELQKGEGECPICLEAFEDAVLTPCAHRLCREC 816

Query: 918  VAMDSEKCSLPGCGFLYE-MQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLK 976
            +       S   C    + M   +++T P +   +  V ++ +E        S+  +FL 
Sbjct: 817  LLSSWRSASAGLCPVCRKSMSKQDLITAPTDNRFQIDVEKNWVE--------SSKISFLL 868

Query: 977  QDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDM 1036
            Q+     LE  +    K IIFSQ+   + +++  L+     FA +   ++   + K +  
Sbjct: 869  QE-----LEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLDGTLNLQQREKVIKE 923

Query: 1037 FRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            F  D S L LLM   +  +G++L+  +  F+M+P W+ ++EEQ I R HR+G T+ + ++
Sbjct: 924  FSEDKSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAIMRIHRIGQTKSVSIK 983

Query: 1096 TLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
               ++GTVEE+M E +Q   R +R++   L   E   AR
Sbjct: 984  RFIVKGTVEERM-EAVQ--ARKQRMISGALTDQEVRSAR 1019



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE-----WNAEVLRHPLYIDLATEDG--FYFYVNTVSGDIA 214
            ++  L P+Q+ A  WM+  E      +A    HP +     ED      Y+N  SGD  
Sbjct: 344 ALQCDLRPYQKQAFYWMMQLEKGSSSQDAATTLHPCWEAYKLEDKRELVLYLNVFSGDAT 403

Query: 215 TGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           T    T++   GG+  D  GLGKTI  ++L+L
Sbjct: 404 TEFPSTLQLARGGILADAMGLGKTIMTIALLL 435


>gi|218190874|gb|EEC73301.1| hypothetical protein OsI_07472 [Oryza sativa Indica Group]
          Length = 1031

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 149/579 (25%), Positives = 250/579 (43%), Gaps = 104/579 (17%)

Query: 612  LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            ++   LIV P  L+  WK +I+ H  PG + ++V     +P   +L    D+V+TT+  L
Sbjct: 492  IAGGNLIVCPMTLLGQWKAEIEAHATPGSVSIYVHYGQNRPKEANLIGQSDIVLTTYGVL 551

Query: 672  SAEWGRRKKSP---MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            S+E+     +    +  +HW RV+LDE H + S  +L +    A +LTA  RW LTGTP 
Sbjct: 552  SSEFSNENSTESGGLYSIHWFRVVLDEAHMIKSPKSLIS--LAAAALTADRRWCLTGTPI 609

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N     L  +  + +FL  E + +N   W   + +P+E   E G   +  +L   M+  
Sbjct: 610  QN----NLEDIYSLFRFLRVEPW-RNWSLWHKLVQKPYEEGDERGLKLVQSILKPIMLRR 664

Query: 789  RK--TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMADW--------- 832
             K  TD +  P+ I      EV + + +E     Y+ L    RR+ +  D          
Sbjct: 665  NKNSTDKEGRPILILPPANIEVKYCDLSETEKDFYDAL---FRRSKVKFDQFVEQGRVLH 721

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLS 892
            N  S +E LL  +Q              CC   H  +  +  D QE  D      L+ L+
Sbjct: 722  NYASILELLLRLRQ--------------CC--DHPFLVLSRGDTQEFAD------LNKLA 759

Query: 893  QEYAFIKYNLLNGGNCL-----------------------------------RHILCLDC 917
            + +       +NG + L                                    H LC +C
Sbjct: 760  KRFLHGGNGAVNGDSSLPSRAYIEEVVQELQKGEGECPICLEAFEDAVLTPCAHRLCREC 819

Query: 918  VAMDSEKCSLPGCGFLYE-MQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLK 976
            +       S   C    + M   +++T P +   +  V ++ +E        S+  +FL 
Sbjct: 820  LLSSWRSASAGLCPVCRKSMSKQDLITAPTDNRFQIDVEKNWVE--------SSKISFLL 871

Query: 977  QDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDM 1036
            Q+     LE  +    K IIFSQ+   + +++  L+     FA +   ++   + K +  
Sbjct: 872  QE-----LEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLDGTLNLQQREKVIKE 926

Query: 1037 FRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            F  D S L LLM   +  +G++L+  +  F+M+P W+ ++EEQ I R HR+G T+ + ++
Sbjct: 927  FSEDKSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAIMRIHRIGQTKSVSIK 986

Query: 1096 TLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
               ++GTVEE+M E +Q   R +R++   L   E   AR
Sbjct: 987  RFIVKGTVEERM-EAVQ--ARKQRMISGALTDQEVRSAR 1022



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE-----WNAEVLRHPLYIDLATEDG--FYFYVNTVSGDIA 214
            ++  L P+Q+ A+ WM+  E      +A    HP +     ED      Y+N  SGD  
Sbjct: 347 ALQCDLRPYQKQALYWMMQLEKGSSSQDAATTLHPCWEAYKLEDKRELVLYLNVFSGDAT 406

Query: 215 TGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           T    T++   GG+  D  GLGKTI  ++L+L
Sbjct: 407 TEFPSTLQLARGGILADAMGLGKTIMTIALLL 438


>gi|242061806|ref|XP_002452192.1| hypothetical protein SORBIDRAFT_04g021470 [Sorghum bicolor]
 gi|241932023|gb|EES05168.1| hypothetical protein SORBIDRAFT_04g021470 [Sorghum bicolor]
          Length = 1024

 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 147/571 (25%), Positives = 249/571 (43%), Gaps = 93/571 (16%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            + LI+ P  L+  WK +I+ H +PG + ++V     +P   S+    D+V+TT+  +S+E
Sbjct: 487  SNLIICPMTLISQWKAEIEAHTKPGTVSIYVHYGQNRPKEASIIGQSDIVLTTYGVVSSE 546

Query: 675  W---GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
            +   G  +   +  VHW RV+LDE H + SS +L +    A +LTA  RW LTGTP  N 
Sbjct: 547  FSMDGSTENGALYSVHWFRVVLDEAHMIKSSKSLIS--LAAAALTADRRWCLTGTPIQN- 603

Query: 732  PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK- 790
                L  L  + +FL  E + +N   W+  + +P+E   E G   L  +L   M+   K 
Sbjct: 604  ---NLEDLYSLFRFLKVEPW-RNWALWNKLVQKPYEEGDERGLKLLQSILKPIMLRRTKN 659

Query: 791  -TD-----LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADW---------NDP 835
             TD     +  +P    EV +   +E     Y  L    RR+ +  D          N  
Sbjct: 660  STDKEGRPILNLPPANIEVKYCVLSEAEKDFYEAL---FRRSKVKFDQFVEQGRVLHNYA 716

Query: 836  SHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVL------------ 883
            S +E LL  +Q              CC   H  +  +  D QE  D+             
Sbjct: 717  SILELLLRLRQ--------------CC--DHPFLVMSRGDTQEFADLKKLAKRFLRGGNG 760

Query: 884  VENGLDPLSQEYAFIK---YNLLNG-GNC--------------LRHILCLDCVAMDSEKC 925
              NG        A+I+     L  G G C                H LC +C+       
Sbjct: 761  AVNGDSSCIPSRAYIEEVVQELQKGEGECPICLEAFEDAVLTPCAHRLCRECLLSSWRSA 820

Query: 926  SLPGCGFLYE-MQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNL 984
            +   C    + M   +++T P +   +       I+++ ++ + S  +  L++      L
Sbjct: 821  TAGLCPVCRKSMSKQDLITAPTDNRFQ-------IDVEKNWVESSKISALLQE------L 867

Query: 985  ESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCL 1044
            E  ++   K I+FSQ+   + +++  L+     FA +   ++   + K +  F  D   L
Sbjct: 868  EVLRSSGAKSIVFSQWTAFLDLLQIPLSRNNFSFARLDGTLNLQQREKVIKEFSEDKGIL 927

Query: 1045 ALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTV 1103
             LLM   +  +G++L+  +  F+M+P W+ ++EEQ + R HR+G T+ + +    ++GTV
Sbjct: 928  VLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKTVSIRRFIVKGTV 987

Query: 1104 EEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            EE+M E +Q   R +R++   L   E   AR
Sbjct: 988  EERM-EAVQ--ARKQRMISGALTDQEVRTAR 1015



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 167 LFPHQQAAVEWMLHRE-----WNAEVLRHPLYIDLATEDG--FYFYVNTVSGDIATGTAP 219
           L  +Q+ A+ WML  E      +A    HP +     ED      Y+N  SGD  T    
Sbjct: 348 LRSYQKQALHWMLQLEKGSSSQDAATTLHPCWEAYKLEDKRELVLYLNVFSGDATTEFPS 407

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLIL 246
           T++   GG+  D  GLGKTI  ++L+L
Sbjct: 408 TLQLSRGGILADAMGLGKTIMTIALLL 434


>gi|302813632|ref|XP_002988501.1| hypothetical protein SELMODRAFT_427193 [Selaginella moellendorffii]
 gi|300143608|gb|EFJ10297.1| hypothetical protein SELMODRAFT_427193 [Selaginella moellendorffii]
          Length = 950

 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 143/552 (25%), Positives = 248/552 (44%), Gaps = 89/552 (16%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            R TL++ P  ++ +W++Q++ H  P  L +  +    + +   +  DYD+V TT+N L+ 
Sbjct: 412  RGTLVICPLSVLSNWESQLKDHTYPAGLKVHKYHGPNRTANARILADYDIVFTTYNMLT- 470

Query: 674  EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
                 + SP+ +VHWLR++LDE H + +      + + A++L A  RW +TGTP  N+  
Sbjct: 471  ----ERNSPLKKVHWLRLVLDEAHIIKNP--RAQQTKSAVALNADRRWAVTGTPIQNSAK 524

Query: 734  SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT-- 791
              LS    +++FLH E   + Q  W   I +P  +    G +RL  L+    IS R+T  
Sbjct: 525  DLLS----LMQFLHFEPLNE-QSFWTKTIQKPLTSGEPVGFARLQGLM--SSISLRRTKE 577

Query: 792  ------DLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPK 845
                   L  +P  I  V  ++ + E    Y+++    R   ++  + D   V      K
Sbjct: 578  TKVNGKKLVDLPPKIITVFPVDLSPEDRSLYDKMEKDGRN--MIRRFLDNGTVT-----K 630

Query: 846  QWKFRSTTIRNLRLSC-----CVAGHIKV-TDAGEDIQETMDVLVENGLDPLSQEYAFIK 899
             +      I  LR  C     C A  + + T +  D Q         G  P +     +K
Sbjct: 631  NYAVVLQMILRLRQICDHTSMCPAEIVNMSTSSDTDTQ---------GAGPKAASPELLK 681

Query: 900  YNLLNGGN------CL-----------RHILCLDCV--AMDSEKCSLPGCGFLYEMQSPE 940
              L   G+      CL            H+ C  C+  A++ E    P C    E+   +
Sbjct: 682  KMLATLGDDFDCPICLAPPSGAVITSCAHVFCRRCLEKALEDEDKQCPMCH--EELSEDD 739

Query: 941  ILT--RPE----------NPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNK 988
            I +  +P+          N         D+  ++PS +  +  +   K     PN++S  
Sbjct: 740  IFSSGKPDEEEDEELSNKNDVEDDDDKIDVKGVKPSAKINALVSMLEKTRAKDPNIKS-- 797

Query: 989  ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF---RHDASCLA 1045
                  ++FSQF   + +IE  L  AG KF  +   M +S + ++++ F   R  +  + 
Sbjct: 798  ------VVFSQFSTMLKLIEGPLQKAGFKFVKLEGGMSASKREENMEAFKSTRSGSPTVF 851

Query: 1046 LLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            LL   +A +GL+L   + VF+M+P W+ ++EEQ + R HR+G TR +HV  L    ++EE
Sbjct: 852  LLSLKAAGVGLNLVTASNVFMMDPWWNPAVEEQAMDRVHRLGQTRDVHVFRLIATDSIEE 911

Query: 1106 QMLEFLQDTDRC 1117
            ++L+ +Q+  R 
Sbjct: 912  RLLQ-VQEKKRA 922



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 10/121 (8%)

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTM 221
            +K  L  HQ+ A+ WM+ RE N+  L  P +     + G   Y NT++   +     ++
Sbjct: 275 VIKSSLMQHQKEALAWMVQRE-NSSAL-PPFW----EKKGTTMYTNTLTNVTSAKRPESL 328

Query: 222 RDFHGGMFCDEPGLGKTITALSLILKTQ-GTLADPPDGVKIIWCTHNGDPRCGYYDLSGD 280
           R   GG+  D+ GLGKT+T L+LI   + G +  P + +K    +  G+P       S D
Sbjct: 329 R---GGILADDMGLGKTLTVLALIATNKPGAVLPPIEDIKEPEQSQGGEPASKKLKTSDD 385

Query: 281 K 281
           K
Sbjct: 386 K 386


>gi|302794729|ref|XP_002979128.1| hypothetical protein SELMODRAFT_110695 [Selaginella moellendorffii]
 gi|300152896|gb|EFJ19536.1| hypothetical protein SELMODRAFT_110695 [Selaginella moellendorffii]
          Length = 851

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 142/539 (26%), Positives = 250/539 (46%), Gaps = 68/539 (12%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW-TDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TL++ P  ++ +W++Q++ H  P  L +  +   ++  +A +LA DYD+V TT+N L+
Sbjct: 318  RGTLVICPLSVLSNWESQLKDHTYPAGLKVHKYHGPNRTANARTLA-DYDIVFTTYNMLT 376

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
                  + SP+ +VHWLR++LDE H + +      + + A++L A  RW +TGTP  N+ 
Sbjct: 377  -----ERNSPLKKVHWLRLVLDEAHIIKNP--RAQQTKSAVALNADRRWAVTGTPIQNSA 429

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT- 791
               LS    +++FLH E   + Q  W   I +P  +    G +RL  L+    IS R+T 
Sbjct: 430  KDLLS----LMQFLHFEPLNE-QSFWTKTIQKPLTSGEPVGFARLQGLMSS--ISLRRTK 482

Query: 792  -------DLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNP 844
                    L  +P  I  V  ++ + E    Y+++    R   ++  + D   V      
Sbjct: 483  ETKVNGKKLVDLPPKIITVFPVDLSPEDRSLYDKMEKDGRN--MIRRFLDNGTVT----- 535

Query: 845  KQWKFRSTTIRNLRLSC-----CVAGHIKV-TDAGEDIQETMDVLVENGLDPLSQEYAFI 898
            K +      I  LR  C     C A  + + T +  D Q     L++  L  L  ++   
Sbjct: 536  KNYAVVLQMILRLRQICDHTSMCPAEIVNMSTSSDTDTQAASPELLKKMLATLGDDFDCP 595

Query: 899  KYNLLNGGNCLR---HILCLDCV--AMDSEKCSLPGCGFLYEMQSPEILT--RPE----- 946
                   G  +    H+ C  C+   ++ E    P C    E+   +I +  +P+     
Sbjct: 596  ICLAPPSGAVITSCAHVFCRRCLEKVLEDEDKQCPMCH--EELSEDDIFSSGKPDEEEDE 653

Query: 947  -----NPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFL 1001
                 N         D+  ++PS +  +  +   K     PN++S        ++FSQF 
Sbjct: 654  ELSNKNDVEDDDDKIDVKGVKPSAKINALISMLEKTRAKDPNIKS--------VVFSQFS 705

Query: 1002 EHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF---RHDASCLALLMDGSASLGLDL 1058
              + +IE  L  AG KF  +   M +S + ++++ F   R  +  + LL   +A +GL+L
Sbjct: 706  TMLKLIEGPLQKAGFKFVKLEGGMSASKREENMEAFKSTRSGSPTVFLLSLKAAGVGLNL 765

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRC 1117
               + VF+M+P W+ ++EEQ + R HR+G TR +HV  L    ++EE++L+ +Q+  R 
Sbjct: 766  VTASNVFMMDPWWNPAVEEQAMDRVHRLGQTRDVHVFRLIATDSIEERLLQ-VQEKKRA 823



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           +K  L  HQ+ A+ WM+ RE N+  L  P +     + G   Y NT++   +     ++R
Sbjct: 182 IKSSLMQHQKEALAWMVQRE-NSSAL-PPFW----EKKGTTMYTNTLTNVTSAKRPESLR 235

Query: 223 DFHGGMFCDEPGLGKTITALSLILKTQ-GTLADPPDGVKIIWCTHNGDPRCGYYDLSGDK 281
              GG+  D+ GLGKT+T L+LI   + G +  P + +K    +  G+P       S DK
Sbjct: 236 ---GGILADDMGLGKTLTVLALIATNKPGAVLPPIEDIKEPEQSQGGEPASKKLKTSDDK 292


>gi|358393960|gb|EHK43361.1| hypothetical protein TRIATDRAFT_130835 [Trichoderma atroviride IMI
            206040]
          Length = 886

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 265/552 (48%), Gaps = 76/552 (13%)

Query: 599  LALCEPLDSVRLYL---SRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSA 654
            + L + L  + L L   S +TLIV P  ++ +W+ QI++HV+   Q ++ V+   +K + 
Sbjct: 343  MGLGKTLQIISLILTGGSGSTLIVAPVSVMSNWEQQIRRHVKEDHQPNILVYHGARKVAG 402

Query: 655  HSLAWDYDVVITTFNRLSAEW--GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
              L+  YDVVIT++  L+ E   G  K     + +W RV+LDEGHT+    N+  K+ +A
Sbjct: 403  QELS-GYDVVITSYGTLAKELDEGGSKTLLSQKKNWRRVVLDEGHTI---RNVKTKVALA 458

Query: 713  IS-LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME 771
             S L A +RW+LTGTP  N+    +  LQ ++KFLH     +  + ++  I R     M 
Sbjct: 459  ASELKAQSRWVLTGTPIINS----VKDLQSLVKFLHITGGIEQPEIFNNAITRKL---MS 511

Query: 772  EGRSR--LLQLLHRCMISARKTDLQTIPLCI-KEVTFLN---FTEEHAGTYNELVVTVRR 825
              RS   LLQ L + +   RK D++ + L + K+  +L+   F  E    Y+ L+   + 
Sbjct: 512  GDRSAEVLLQSLMQDICLRRKKDMKFVDLKLPKKTEYLHRITFLPEEKSKYDALLSEAKG 571

Query: 826  NILMADWNDPSHVESLLNPKQWKFRSTTIRNLRL--SCCVAGHIKVTDAGEDIQETMDVL 883
              ++ ++   S      + ++ +F++   R LRL  SC    H  +  A   I + M +L
Sbjct: 572  --VLEEYQARSQ-----SGQKGRFQNVLERLLRLRQSC---NHWTLCKA--RIDDLMQLL 619

Query: 884  VENGLDPL-----------------SQEYAFIKYNLLNG---GNCLRHILCLDCVAMDSE 923
             +  + PL                 SQE   I Y+        NC +H+ C  C+    E
Sbjct: 620  KDQDVVPLTEKNRALLQEALRLYIDSQEDCAICYDTPTNPIITNC-QHVFCRHCITRAVE 678

Query: 924  KCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQ-PSYRQWSNTNTFLKQDLYRP 982
                       + + P    +    N   P P+   +    +  Q S T   L+  + R 
Sbjct: 679  ----------LQGKCPMCRNQLTEDNFLEPAPEGTFDANFDTDTQSSKTEAMLQ--IVRA 726

Query: 983  NLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDA- 1041
             L++  +   K++IFSQ+   ++++++QL  AG+K+  +   M +  + +++D   +++ 
Sbjct: 727  TLKNEGS---KIVIFSQWTSFLNIVQKQLENAGLKYCRIDGSMSAEKRDRAIDALDNNSE 783

Query: 1042 SCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRG 1101
            +C+ L      S+GL+L     V L +  W  ++E+Q + R HR+G TR   +  L M G
Sbjct: 784  TCIMLASLAVCSVGLNLVSADTVILSDSWWAPAIEDQAVDRVHRLGQTRETKIWRLIMEG 843

Query: 1102 TVEEQMLEFLQD 1113
            TVEE++L+  Q+
Sbjct: 844  TVEERVLDVQQE 855



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATE----DGFYFYVNTVSGDIATGTA 218
           +K  L P+Q   + WM  +E N ++   P+  D  T+    D    Y N V+ D  T  A
Sbjct: 275 LKSTLLPYQLQGLAWMQSKE-NPQL--PPVGSDTVTQLWRRDSKGRYWN-VASDFITSKA 330

Query: 219 PTMRDFHGGMFCDEPGLGKTITALSLIL 246
           PT+  F GG+  D+ GLGKT+  +SLIL
Sbjct: 331 PTL--FSGGILADDMGLGKTLQIISLIL 356


>gi|148237261|ref|NP_001090145.1| helicase-like transcription factor [Xenopus laevis]
 gi|80476497|gb|AAI08610.1| MGC131155 protein [Xenopus laevis]
          Length = 999

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 242/537 (45%), Gaps = 79/537 (14%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TLI+ P  ++ +W  Q +QH++P   L+++++   ++     +  + DVV+TT++ LS
Sbjct: 466  RTTLIICPLSVLSNWIDQFEQHIKPEVHLNIYIYYGPERTKDPKVLSEQDVVVTTYSVLS 525

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            +++G R +SP+ ++ WLRV+LDEGHT+ +      + Q  +SL A  RW+LTGTP  N+ 
Sbjct: 526  SDYGSRSESPLHKMKWLRVVLDEGHTIRNP--NAQQTQAVLSLEAQRRWILTGTPIQNS- 582

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT- 791
               L  L  ++ FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 583  ---LKDLWSLICFLKLKPF-TDREWWHRTIQRPVTTGEEGGLRRLQALIKNITLRRTKTS 638

Query: 792  --------DLQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRRNILMADWNDPSHVE 839
                    DL    + I+ V     +EE    Y    NE    + R +   +    SH  
Sbjct: 639  KIRGRPVLDLPERKVFIQHV---ELSEEEREIYESMKNEGKAVISRYV--DEGTVLSHYA 693

Query: 840  SLLNPKQWKFRSTTIRNLRLSCCVAGHIKVT-------------DAGEDIQETMDVLVEN 886
             +L           +  LR  CC    +  T             D  E + + + +++ +
Sbjct: 694  DVL---------AVLLRLRQLCCHPHLVSSTLSTMASTADSTPGDVREKLVQKIKLVLSS 744

Query: 887  GLDPLSQEYAFIKYNLLNGG--NCLRHILCLDC----VAMDSEKCSLPGCGFLYEMQSPE 940
            G D    E   I  + LN        H+ C  C    + +  ++   P C  L  +   +
Sbjct: 745  GSD----EECAICLDSLNMPVITYCAHVFCKPCICQVIQLKKQEAKCPLCRGLLRLD--Q 798

Query: 941  ILTRPENPNPKWPVPQDL---IELQPSYRQWSNTN-TFLKQDLYRPNLESNKALPDKVII 996
            ++  P+         +DL   I  +P  +  S+T  + L   L     +  K    K I+
Sbjct: 799  LVECPQ---------EDLDSSINKKPDQKWMSSTKISALMHSLVE---QRRKDATIKSIV 846

Query: 997  FSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF-RHDAS--CLALLMDGSAS 1053
             SQF   + +IE  L  +G  F  +   M    + +++  F R DA    + LL   +  
Sbjct: 847  VSQFTSFLSLIEVALRESGFMFTRLDGSMTQKKRTEAIQSFQRPDAQSPTIMLLSLKAGG 906

Query: 1054 LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +GL+L+  +RVFLM+P W+ + EEQ   R HR+G T+ + +    +R +VEE ML+ 
Sbjct: 907  VGLNLTAASRVFLMDPAWNPAAEEQCFDRCHRLGQTKEVIITKFVVRDSVEENMLKI 963



 Score = 47.0 bits (110), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 10/81 (12%)

Query: 166 KLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFH 225
           KL  HQ+ A+ WM+ RE   E+   P +     E+  + Y NT++ + A    P   +  
Sbjct: 254 KLLSHQKQALSWMVSRENTKEL--PPFW-----EERNHLYYNTLT-NFAEKQKP--ENVR 303

Query: 226 GGMFCDEPGLGKTITALSLIL 246
           GG+  D+ GLGKT++ ++LIL
Sbjct: 304 GGILADDMGLGKTLSVIALIL 324


>gi|46136625|ref|XP_390004.1| hypothetical protein FG09828.1 [Gibberella zeae PH-1]
          Length = 882

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 148/570 (25%), Positives = 254/570 (44%), Gaps = 70/570 (12%)

Query: 574  VEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRA---TLIVVPSYLVDHWKT 630
            V  G      PK L      + A  + L + L  + L L+     TLIV P  ++ +W  
Sbjct: 315  VASGFVTSIAPKLLSG---GILADDMGLGKTLQIISLILTGGKGPTLIVAPVSVMSNWSQ 371

Query: 631  QIQQHVR-PGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE--WGRRKKSPMMQVH 687
            QI++HVR   Q  +  +   +K +A  L   YDVVIT++ RL+ E   G ++      + 
Sbjct: 372  QIKRHVRGDKQPSIITYHGSEKATAKQLQG-YDVVITSYGRLARERDQGVKRALTSEDIK 430

Query: 688  WLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
            W RV+LDEGHT+ +S   T   Q A  + A +RW+LTGTP  N+    +  L  ++KFLH
Sbjct: 431  WRRVVLDEGHTIRNSS--TKVAQAACEINAESRWVLTGTPIVNS----VKDLHSLVKFLH 484

Query: 748  EEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCI---KE-V 803
                 +  + ++  I R      + G  +LLQ L   +   RK D++ + L +   KE V
Sbjct: 485  ITGGIEQSEIFNAQITRRLAVGDKTG-EKLLQALMHDLCLRRKKDMKFVDLKLPAKKEYV 543

Query: 804  TFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRL---- 859
              ++F ++    Y+ L+   R    +  W   S V      ++ +F++   R LRL    
Sbjct: 544  HRISFRKDEKRKYDALLDEARGE--LEQWQASSQV-----GQKGRFQNVLERLLRLRQIC 596

Query: 860  ---SCC---VAGHIKVTDAGEDI----------QETMDVLVENGLDPLSQEYAFIKYNLL 903
               S C   V+  +K+ D  E +          QE + + +E      SQE   I Y+  
Sbjct: 597  NHWSLCKERVSDILKLLDEHEVVPLNEKNRGLLQEALRLYIE------SQEECAICYDNP 650

Query: 904  NGG--NCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIEL 961
            N       +H+ C  C+                + + P    + +  +   P P+D  + 
Sbjct: 651  NDPVITTCKHVFCRGCIIR----------AIQIQHKCPMCRNKLDESSLLEPAPEDAGDE 700

Query: 962  QPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGM 1021
            +    +  ++ T     + +  +    +   KV++FSQ+   +++IE QL   G+ +  +
Sbjct: 701  EDFDAESQSSKTEAMMQILKATMRKEGS---KVVVFSQWTSFLNIIEAQLKADGMGYTRI 757

Query: 1022 YSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVI 1080
               M +  + K+++    D     +L      S+GL+L     V L +  W  ++E+Q I
Sbjct: 758  DGSMKADKRDKAIEALDSDPETRVMLASLAVCSVGLNLVAADTVILSDSWWAPAIEDQAI 817

Query: 1081 SRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             R HR+G TR   +  L M G+VEE++L+ 
Sbjct: 818  DRVHRLGQTRETTIFRLVMEGSVEERVLDV 847



 Score = 40.8 bits (94), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 8/87 (9%)

Query: 163 MKLKLFPHQQAAVEWMLHRE---WNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAP 219
           +K +L P+Q   + WM  +E     AE  +  + + L      +F  N  SG   T  AP
Sbjct: 269 LKAQLLPYQLQGLAWMTSKEKPQLPAEGSQDSVQLWLHQSKKKFF--NVASG-FVTSIAP 325

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLIL 246
            +    GG+  D+ GLGKT+  +SLIL
Sbjct: 326 KL--LSGGILADDMGLGKTLQIISLIL 350


>gi|407921689|gb|EKG14829.1| SNF2-related protein [Macrophomina phaseolina MS6]
          Length = 739

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 167/567 (29%), Positives = 259/567 (45%), Gaps = 69/567 (12%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVW-TDHKKPSAHSLAWDYDVVITTFNR 670
            S ATLI+ P  ++ +W +QI++HV+P  +L + ++    KKP       +YDVVITT+  
Sbjct: 198  SEATLILAPLSVMSNWSSQIKRHVKPQHELRVLIYHGTRKKPIDPKEIRNYDVVITTYET 257

Query: 671  LSAE-WGRR--------KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRW 721
              AE W +         +++ +  VHW RV+LDEGH + +    + K   A++L A +RW
Sbjct: 258  AMAEFWAKHCKNNQTVPRQNGLFSVHWRRVVLDEGHNIRNP--ASKKAVAAVNLMARSRW 315

Query: 722  LLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLL 781
            +LTGTP  NT    L  L  + KF+         + ++G ++RP     E G S LLQ+L
Sbjct: 316  VLTGTPIINT----LKDLYSLAKFIRLSGGLDRFELFNGALIRPVNQGDEHG-SFLLQML 370

Query: 782  HRCMISARKTDLQTIPLCIKE-------VTFL-NFTEEHAGTYNELVVTV---RRNILMA 830
               +   R+ D+  I L + E       +TFL +  E++A    +   T+   R NI   
Sbjct: 371  MSSICLRRRKDMPFIDLRLPELSEYVHRITFLPHEQEKYAALEAQAKGTLDRYRENISGK 430

Query: 831  DWNDPSH--VESLLNPKQ----WKFRSTTIRNLRLSCCVA--GHIKVTDAGEDIQETMDV 882
            D        +E LL  +Q    WK         R+S  +      K  D     + T+  
Sbjct: 431  DAAKTYRHLLEILLRLRQACNHWKLCGEE----RISGLLEMLSDQKTVDLTPANRVTLQA 486

Query: 883  LVENGLDPLSQEYAFIKYNLLNGG--NCLRHIL---CLDCVAMDSEKCSLPGCGFLYEMQ 937
            +++  +D  SQE   I    L+     C  H     C++ V     KC  P C    E+ 
Sbjct: 487  MLQLSID--SQEDCAICLEPLHDPVITCCAHAFGYSCIERVIEGQHKC--PMCR--AELP 540

Query: 938  SPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIF 997
            S   L RP    P        I+   S    S     LK  + +     +KA+  K I+F
Sbjct: 541  STASLVRPPKEVPP----PPPIDADTSS---SKIEALLK--ILKATASKDKAI--KTIVF 589

Query: 998  SQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGL 1056
            SQ+   + ++E QL  AGI+FA +   M +  +  SL+   ++  C  LL      S+GL
Sbjct: 590  SQWTSFLDILEPQLEQAGIRFARIDGTMSALARDASLEALENNPDCTVLLASLAVCSIGL 649

Query: 1057 DLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            +L   ++V L +  W  ++E+Q + R HR+G  R   V  L +  TVE  +L   +D  +
Sbjct: 650  NLVAASQVVLADSWWAPAIEDQAVDRVHRLGQKRETTVFRLVVENTVEANVLRIQEDKRK 709

Query: 1117 CRRLLKEELVKPERE-GARSHRTLHDF 1142
              RL   E  K ++E GAR    L DF
Sbjct: 710  LMRLAFAEKSKEKKERGAR----LADF 732


>gi|449271033|gb|EMC81648.1| Helicase-like transcription factor, partial [Columba livia]
          Length = 942

 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 242/535 (45%), Gaps = 60/535 (11%)

Query: 612  LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
            + RATLIV P  ++ +W  Q  QHV R   ++++V+    +    S+  + DVV+TT++ 
Sbjct: 407  VPRATLIVCPLSVLSNWIDQFNQHVHRDFHVNIYVYYGSDRNKDPSVLAEQDVVLTTYSI 466

Query: 671  LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
            L+ ++G R  SP+ +V WLR++LDEGHT+ +      + + A+SL    RW+LTGTP  N
Sbjct: 467  LATDYGIRDGSPLHKVRWLRIVLDEGHTIRNPG--AQQTRAALSLEGRRRWVLTGTPIQN 524

Query: 731  TPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK 790
            +    +  L  ++ FL  + +  +Q+ W   I RP       G  RL  L+    +   K
Sbjct: 525  S----VKDLWSLISFLKLKPFS-DQEWWRRTIQRPVVLGAPGGLGRLQCLIRSITLRRTK 579

Query: 791  T---------DLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI--LMADWNDPSHVE 839
            T         +L    + I+ VT    TEE    Y  +    +  +   +++    +H  
Sbjct: 580  TSKVKGKPVLELPERKVLIQHVTL---TEEERRIYESVKKEGKAAVSRFLSEGTVLAHYA 636

Query: 840  SLLNPKQWKFRSTTIRNLRLSCC--------VAGHIKVTDAGEDIQETMDVLVENGLDPL 891
             +L           +  LR  CC         +G        E+++ET+   ++  L   
Sbjct: 637  DVLG---------VLLRLRQLCCHPRLCIDTASGLSADNKTPEELRETLVSKMKLVLSSG 687

Query: 892  SQEYAFIKYNLLNGGNCLR--HILCLDCV----AMDSEKCSLPGCGFLYEMQSPEILTRP 945
            S E   +    L      R  H+ C  C+      +  K   P C    E+++ +++  P
Sbjct: 688  SDEECAVCLESLTCPVITRCAHVFCKPCIFEVIRGEQPKAKCPLC--RNELRAEDLVQCP 745

Query: 946  ENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQFLEHI 1004
            +          D  + + S ++W+ ++      L    +E  +  P  K ++ SQF   +
Sbjct: 746  QEEE------TDPSDGKKSDQEWTPSSKI--NALMHALIELQRDDPTAKCLVVSQFTAFL 797

Query: 1005 HVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF---RHDASCLALLMDGSASLGLDLSFV 1061
             +IE  L  +GI F  +   M    + +++  F   R  +  + LL   +  +GL+L+  
Sbjct: 798  SLIENPLKESGIAFTRLDGSMAQKKRAEAVQCFQSSRAGSPTVMLLSLKAGGVGLNLTAA 857

Query: 1062 TRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            +RVFLM+P W+ + EEQ   R HR+G  R + +    ++ +VEE ML  +Q+  R
Sbjct: 858  SRVFLMDPAWNPAAEEQCFDRCHRLGQNRGVVITKFIVKDSVEENMLR-IQNKKR 911



 Score = 48.5 bits (114), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 14/82 (17%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR--DF 224
           L PHQ+ A+ WM+ RE    +   P +     E+   FY NT+     T  A  MR  D 
Sbjct: 181 LLPHQKQALAWMVSRENRNNL--PPFW-----EERGGFYYNTL-----TNFAEKMRPQDV 228

Query: 225 HGGMFCDEPGLGKTITALSLIL 246
            GG+  D+ GLGKT+T ++LIL
Sbjct: 229 PGGILADDMGLGKTLTTIALIL 250


>gi|357509293|ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula]
 gi|124360542|gb|ABN08552.1| SNF2-related; Zinc finger, RING-type; ATP-requiring DNA helicase RecQ
            [Medicago truncatula]
 gi|355499950|gb|AES81153.1| DNA repair protein RAD5 [Medicago truncatula]
          Length = 844

 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 254/548 (46%), Gaps = 70/548 (12%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            +  TLIV P  ++  W TQ+++H   G L ++++   ++         YD+V+TT+  L 
Sbjct: 294  TNGTLIVCPPSVISTWITQLEEHTNRGTLKVYMYYGDRRTQDAEELRKYDIVLTTYATLG 353

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            AE  R   +P+ ++ W R++LDE HT+  ++N   + Q  I+L A  RW +TGTP  N  
Sbjct: 354  AEL-RCSDTPVKKLGWRRIVLDEAHTI-KNVN-AGQSQAVIALNAKRRWAVTGTPIQNGS 410

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
                S    ++ FLH E +   +  W   + RP     + G SRL  L+    IS R+T 
Sbjct: 411  YDLFS----LMAFLHFEPFSI-KSYWQSLVQRPLNQGKQTGMSRLQVLM--SAISLRRTK 463

Query: 793  ---LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDP-----SHVESL--- 841
               L  +P  I E  ++  + E    Y+E+   ++  ++  + ND      S V S+   
Sbjct: 464  DTALGGLPPKIVETCYVELSFEERKLYDEVKEEIKSLMMHHNSNDRLVSSYSTVLSMILR 523

Query: 842  ------------LNPKQWKFRSTTIRNLRL--SCCVAGHI-KVTDAGEDIQ------ETM 880
                        L+ K   F ST I  + +  S C+  +I K + AG  +       +T+
Sbjct: 524  LRQICADFSMVPLDFKSCLFSSTDIEGIEMNQSGCIFCYIRKFSFAGNHVSKNPELLQTL 583

Query: 881  DVLVENGLD---P--LSQEYAFIKYNLLNGGNCLRHILCLDCV--AMDSEKCSLPGCGFL 933
              ++++G D   P  LS     +         C  HI C +C+   +     S P C   
Sbjct: 584  IRMLQDGEDFDCPICLSPPTDIVI-------TCCAHIFCRECILKTLQRSNSSCPLCR-- 634

Query: 934  YEMQSPEILTRPENPNPKWPVPQDL-IEL-QPSYRQWSNTNTFLKQDLYRPNLESNKALP 991
              +   E+ + P  P        D+  EL     R  +  +T +K  L   + + N A  
Sbjct: 635  RSLSETELFSAP--PESFKTDDTDVTTELCTAEVRSSTKVSTLIK--LLTESRDQNPA-- 688

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH---DASCLALLM 1048
             K ++FSQF + + ++E+ L  AG K   +   M++  + + ++ F+    D   + L  
Sbjct: 689  TKSVVFSQFRKMLLLLEEPLKAAGFKTLRLDGTMNAKQRAQVIEQFQLSEVDEPMILLAS 748

Query: 1049 DGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              ++S G++L+  +RV+LMEP W+ ++EEQ + R HR+G    + +  L  + ++EE++L
Sbjct: 749  LRASSTGINLTAASRVYLMEPWWNPAVEEQAMDRVHRIGQKEEVKIVRLIAKNSIEEKIL 808

Query: 1109 EFLQDTDR 1116
              LQ+  +
Sbjct: 809  -MLQEKKK 815



 Score = 43.9 bits (102), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           +K +L  HQ+ A+ W+ HRE   ++   P +     E+    +VN ++ +  T   P   
Sbjct: 197 IKSELLQHQKEALGWLYHRESTQDL--PPFW-----EEKVGNFVNVLT-NYQTNARP--E 246

Query: 223 DFHGGMFCDEPGLGKTITALSLI 245
              GG+F D  GLGKT+T LSLI
Sbjct: 247 PLRGGIFADGMGLGKTLTLLSLI 269


>gi|15242960|ref|NP_197667.1| DNA/RNA helicase protein RAD5 [Arabidopsis thaliana]
 gi|60390961|sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 2; Short=SMARCA3-like protein 2
 gi|10178249|dbj|BAB11681.1| DNA repair protein RAD5 protein [Arabidopsis thaliana]
 gi|110737306|dbj|BAF00599.1| hypothetical protein [Arabidopsis thaliana]
 gi|332005687|gb|AED93070.1| DNA/RNA helicase protein RAD5 [Arabidopsis thaliana]
          Length = 1029

 Score =  149 bits (377), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 148/565 (26%), Positives = 241/565 (42%), Gaps = 80/565 (14%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
              LIV P  L+  WKT+I+ H +PG L ++V     +P    L    DVVITT+  L++E
Sbjct: 491  GNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQSDVVITTYGVLTSE 550

Query: 675  WGRRKKSP---MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
            + +   +    +  V W R++LDE HT+ +S +  +    A +L A  RW LTGTP  N 
Sbjct: 551  FSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQIS--LAAAALVADRRWCLTGTPIQN- 607

Query: 732  PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK- 790
                L  L  +L+FL  E +G     W+  + +PFE   E G   +  +L   M+   K 
Sbjct: 608  ---NLEDLYSLLRFLRIEPWG-TWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKS 663

Query: 791  -TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNP 844
             TD +  P+ +       V +   +E     Y+ L    R  +    + +   V  L N 
Sbjct: 664  STDREGRPILVLPPADARVIYCELSESERDFYDALF--KRSKVKFDQFVEQGKV--LHN- 718

Query: 845  KQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDV--------------LVENGLDP 890
                + S     LRL  C      V   G D  E  D+              L   G D 
Sbjct: 719  ----YASILELLLRLRQCCDHPFLVMSRG-DTAEYSDLNKLSKRFLSGKSSGLEREGKDV 773

Query: 891  LSQEYAFIKYNLLNGGN------CLR-----------HILCLDCVAM---DSEKCSLPGC 930
             S+ +       L  G       CL            H LC +C+     +S     P C
Sbjct: 774  PSEAFVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCPVC 833

Query: 931  GFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKAL 990
                  Q  E++T P     +       ++++ ++ + S     L++      LE  ++ 
Sbjct: 834  RNTVSKQ--ELITAPTESRFQ-------VDVEKNWVESSKITALLEE------LEGLRSS 878

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
              K I+FSQ+   + +++  L+     F  +   +    + K L  F  D S L LLM  
Sbjct: 879  GSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSL 938

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +G++L+  +  F+M+P W+ ++EEQ + R HR+G T+ + +    ++GTVEE+M E
Sbjct: 939  KAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERM-E 997

Query: 1110 FLQDTDRCRRLLKEELVKPEREGAR 1134
             +Q   R +R++   L   E   AR
Sbjct: 998  AVQ--ARKQRMISGALTDQEVRSAR 1020



 Score = 47.0 bits (110), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 13/110 (11%)

Query: 166 KLFPHQQAAVEWMLHREWN-----AEVLRHPLYID--LATEDGFYFYVNTVSGDIATGTA 218
           +L P+Q+ A+ WM   E       A  + HP +    LA +     Y+N+ +GD      
Sbjct: 347 ELRPYQKQALHWMTQLEKGNCTDEAATMLHPCWEAYCLADKRELVVYLNSFTGDATIHFP 406

Query: 219 PTMRDFHGGMFCDEPGLGKTITALSLIL------KTQGTLADPPDGVKII 262
            T++   GG+  D  GLGKT+  +SL+L       + G L    +G K+I
Sbjct: 407 STLQMARGGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVI 456


>gi|297812401|ref|XP_002874084.1| hypothetical protein ARALYDRAFT_489124 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297319921|gb|EFH50343.1| hypothetical protein ARALYDRAFT_489124 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1029

 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 242/565 (42%), Gaps = 80/565 (14%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
              LIV P  L+  WK++I+ H +PG L ++V     +P    L    DVVITT+  L++E
Sbjct: 491  GNLIVCPMTLLGQWKSEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQNDVVITTYGVLTSE 550

Query: 675  WGRRKKSP---MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
            + +   +    +  V W R++LDE HT+ +S +  +    A +L A  RW LTGTP  N 
Sbjct: 551  FSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQIS--LAAAALVADRRWCLTGTPIQN- 607

Query: 732  PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK- 790
                L  L  +L+FL  E +G     W+  + +PFE   E G   +  +L   M+   K 
Sbjct: 608  ---NLEDLYSLLRFLRIEPWG-TWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKS 663

Query: 791  -TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNP 844
             TD +  P+ +       V +   +E     Y+ L    R  +    + +   V  L N 
Sbjct: 664  STDREGRPILVLPPADARVIYCELSESERDFYDALF--KRSKVKFDQFVEQGKV--LHN- 718

Query: 845  KQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDV--------------LVENGLDP 890
                + S     LRL  C      V   G D  E  D+              L   G D 
Sbjct: 719  ----YASILELLLRLRQCCDHPFLVMSRG-DTTEYSDLNKLSKRFLSGKSSGLEREGKDV 773

Query: 891  LSQEYAFIKYNLLNGGN------CLR-----------HILCLDCVAM---DSEKCSLPGC 930
             S+ +       L  G       CL            H LC +C+     +S     P C
Sbjct: 774  PSEAFVQEVVEELRKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRNSNTGLCPVC 833

Query: 931  GFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKAL 990
                  Q  E++T P     +       ++++ ++ + S     L++      LE  ++ 
Sbjct: 834  RKTVSKQ--ELITAPTESRFQ-------VDVEKNWVESSKITALLEE------LEGLRSS 878

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
              K I+FSQ+   + +++  L+     F  +   ++   + K L  F  D S L LLM  
Sbjct: 879  GSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLNQQQREKVLKEFSEDGSILVLLMSL 938

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +G++L+  +  F+M+P W+ ++EEQ + R HR+G T+ + +    ++GTVEE+M E
Sbjct: 939  KAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKSVKIRRFIVKGTVEERM-E 997

Query: 1110 FLQDTDRCRRLLKEELVKPEREGAR 1134
             +Q   R +R++   L   E   AR
Sbjct: 998  AVQ--ARKQRMISGALTDQEVRSAR 1020



 Score = 45.4 bits (106), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 13/116 (11%)

Query: 166 KLFPHQQAAVEWMLHREWNA-----EVLRHPLYID--LATEDGFYFYVNTVSGDIATGTA 218
           +L P+Q+ A+ WM   E          + HP +    LA +     Y+N+ +GD      
Sbjct: 347 ELRPYQKQALHWMTQLEKGKCTDEEATMLHPCWEAYCLADKRELVVYLNSFTGDATIHFP 406

Query: 219 PTMRDFHGGMFCDEPGLGKTITALSLIL------KTQGTLADPPDGVKIIWCTHNG 268
            T++   GG+  D  GLGKT+  +SL++       + G L    +G K+I  + +G
Sbjct: 407 STLQMARGGILADAMGLGKTVMTISLLIAHSWKAASTGFLCPNYEGDKVISSSVDG 462


>gi|171688590|ref|XP_001909235.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944257|emb|CAP70367.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1092

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 143/599 (23%), Positives = 257/599 (42%), Gaps = 88/599 (14%)

Query: 604  PLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDV 663
            PL  +R  + +ATL+V P   + +W+ QI+QH+ PG+L+ +++    +    +    YD+
Sbjct: 500  PLSQIRRNV-KATLLVCPLSTITNWEEQIKQHIEPGKLNYYIYHGANRIKDSAQLARYDL 558

Query: 664  VITTFNRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
            VITT+  +++E   R K      P+ ++ W R++LDE HT+     L+   +    L A+
Sbjct: 559  VITTYGSVTSELNARLKKKPGLYPLEEIAWFRIVLDEAHTIREQNTLS--FKSICRLQAN 616

Query: 719  NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL 778
             RW +TGTP  N    +L  L  +L FL  + +    K +   I+ PF+A   +   +L 
Sbjct: 617  RRWAVTGTPVQN----KLEDLASLLAFLRLKPFDDRSK-FIQYIIAPFKAADPDIVPKLR 671

Query: 779  QLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYN--ELVVTVRRNILMADWNDPS 836
             L+    I   K  ++ +P    EV  L F+ E    Y+  + +   R  +L       +
Sbjct: 672  VLIDTITIRRLKDKIE-LPERTDEVIRLEFSSEERKVYDLFKKMAEERVQVLTGQGTGQT 730

Query: 837  HVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQE-------TMDVLVENGLD 889
             +   +  K       +I  LRL C     +   D  ++IQ         +D   ++G  
Sbjct: 731  RI---MGGKTMIHVLRSILQLRLICAHGKDLLNDDDFQEIQGLSADAPIDLDSEDDDGKP 787

Query: 890  PLSQEYAFIKYNLLNGGN---CLR-----------------------------HILCLDC 917
             L+++ A+  Y L+  G+   C++                             H+ C  C
Sbjct: 788  ALTEKKAYEMYYLMQEGSSDFCIKCNNKLGAIEVDDPEFDQNNDVLGYMAQCFHVYCPTC 847

Query: 918  VAMDSEKCS------LPGCGFLYEMQSPEIL---------TRPENPNPKWPVPQDLIELQ 962
            +    +  +       P C F  +    E+          TR         +P D     
Sbjct: 848  IRFVHQHGNGDMHQGCPTCAFAQKAHCVELRRSKADVEHETRQTKTRAGKIIPDD----- 902

Query: 963  PSYRQWSNTNTFLKQDLYRPNLESNKALPD----KVIIFSQFLEHIHVIEQQLTVAGIKF 1018
              Y         L ++L   N   ++A PD    K ++FS +  H+ +IE  L  AGI  
Sbjct: 903  -RYTGPHTKTRALVEELLA-NKARSEANPDEPPYKSVVFSGWTSHLDLIEIALDDAGITH 960

Query: 1019 AGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEE 1077
            + +   M  + + ++++ FR D +   +L+   +  +GL+L+    VF+MEP ++ + E 
Sbjct: 961  SRLDGKMTRNARNQAMEAFRDDPNVQVILVSIMAGGMGLNLTAGNSVFVMEPQFNPAAEA 1020

Query: 1078 QVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSH 1136
            Q + R HR+G  RP+      M G+ EE+M+      ++ ++L    + + E EG RS 
Sbjct: 1021 QAVDRVHRLGQKRPVRTVRYIMSGSFEEKMIAL---QEKKKQLASLSMDRAEAEGVRSQ 1076


>gi|328773732|gb|EGF83769.1| hypothetical protein BATDEDRAFT_85620 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1065

 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 250/566 (44%), Gaps = 71/566 (12%)

Query: 598  RLALCEPLD-SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHS 656
            R ++ +PL  + ++      L+V P  L+  W+ +I++   PG + + V+  +++    +
Sbjct: 489  RFSMGQPLSHATQVNCLELFLVVCPVNLLAQWRDEIKRAFEPGVIRVGVYYGNERERVDT 548

Query: 657  LAWDY----DVVITTFNRLSAEWGR-RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQM 711
              +      D++ITT+  L +++    K SPM  + W RV+LDE H +       +K  M
Sbjct: 549  RMFAKKTSPDIIITTYGTLKSDYSNFLKNSPMYAIKWHRVVLDEAHYIKEKSTAASK--M 606

Query: 712  AISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME 771
              +L+A+NRW +TGTP  N    +L  +  ++ FL  E + Q    W   +  PFE    
Sbjct: 607  VCALSATNRWAITGTPIVN----KLDDIYSLIHFLRVEPWCQFC-FWHSFVTIPFEKRDR 661

Query: 772  EGRSRLLQLLHRCMI-SARKTDLQ--------TIPLCIKEVTFLNFTEEHAGTYNELVVT 822
                 +  +L   +I   R  D++        ++P    ++ +LNF+ +    Y+ L+  
Sbjct: 662  SALEIVQTILEPLIIRQVRMKDMRNQDGNLVISLPPKTIDIKYLNFSPDEQEIYDSLLKH 721

Query: 823  VRRNIL---MADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAG----------HIKV 869
             R  ++   +    D  HV  LL+  +     T +   +  C  A            IK 
Sbjct: 722  SRHKLMELKIIGKADYMHVFQLLSRMRQMCDHTLLIKSKSLCTEADTASMSIPLEEMIKK 781

Query: 870  TDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPG 929
               G +  E    L ++  D  SQE      +++    CL H++CL CV    EK S  G
Sbjct: 782  YTRGNNSAEFFSKLADDIADSSSQECPVGPSSVVLP--CL-HVICLPCVEDMIEKRSAKG 838

Query: 930  -----CGFL----YEMQSPEILTRPENPN---PKWPVPQD-------LIELQ-----PSY 965
                 C        E +  +IL   +N N   P+    +D        I LQ     PS 
Sbjct: 839  EEGVVCPMCRQSCAESELMKILETQQNANATSPRLFASKDAPLHAGSTIRLQSIKSIPSK 898

Query: 966  RQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPM 1025
            +  + TN  L      P ++S        ++FSQ+   + ++E  +   GI F  M   +
Sbjct: 899  KLNTLTNDLLTLQKSDPKIKS--------VVFSQWTRMLDLVEISMREHGINFVRMDGSL 950

Query: 1026 HSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAH 1084
               N+ K L  F+ D +   LL    S  +GL+L+  + VF+++P W+ S+E Q I R H
Sbjct: 951  SQKNREKVLHTFKTDDTVTVLLATLRSTGVGLNLTVASCVFMLDPWWNESVEFQAIDRVH 1010

Query: 1085 RMGATRPIHVETLAMRGTVEEQMLEF 1110
            R+G  +P+ V    MR +VEE+MLE 
Sbjct: 1011 RIGQNKPVTVTRYIMRNSVEEKMLEI 1036



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 4/86 (4%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLR---HPLYIDLATEDGFYFYVNTVSGDIATGTAP 219
           M L L  +Q  A+ +M  +E   ++      PL+ +L+T+ GF FY N  SG+++  T P
Sbjct: 393 MTLDLHDYQTTALAFMYAKENRDDMDSMGISPLWTELSTKTGFPFYYNRFSGELSLET-P 451

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLI 245
                 GG+  DE GLGKTI  L+LI
Sbjct: 452 KETHCTGGILADEMGLGKTIEMLALI 477


>gi|408390051|gb|EKJ69464.1| hypothetical protein FPSE_10344 [Fusarium pseudograminearum CS3096]
          Length = 789

 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 146/570 (25%), Positives = 254/570 (44%), Gaps = 70/570 (12%)

Query: 574  VEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRA---TLIVVPSYLVDHWKT 630
            V  G      PK L      + A  + L + L  + L L+     TLIV P  ++ +W  
Sbjct: 222  VASGFVTSIAPKLLSG---GILADDMGLGKTLQIISLILTGGKGPTLIVAPVSVMSNWSQ 278

Query: 631  QIQQHVR-PGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE--WGRRKKSPMMQVH 687
            QI++HVR   Q  +  +   +K +A  L   YDVVIT++ RL+ E   G ++      + 
Sbjct: 279  QIKRHVRGDKQPSIITYHGSEKATAKQLQ-GYDVVITSYGRLARERDQGVKRALTSEDIK 337

Query: 688  WLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
            W RV+LDEGHT+ +S   T   Q A  + A +RW+LTGTP  N+    +  L  ++KFLH
Sbjct: 338  WRRVVLDEGHTIRNSS--TKVAQAACEINAESRWVLTGTPIVNS----VKDLHSLVKFLH 391

Query: 748  EEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCI---KE-V 803
                 +  + ++  I R      + G  +LLQ L   +   RK D++ + L +   KE V
Sbjct: 392  ITGGIEQSEIFNAQITRRLAVGDKTG-EKLLQALMHDLCLRRKKDMKFVDLKLPAKKEYV 450

Query: 804  TFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRL---- 859
              ++F ++    Y+ L+   R    +  W   S V      ++ +F++   R LRL    
Sbjct: 451  HRISFRKDEKRKYDALLDEARGE--LEQWQAGSQV-----GQKGRFQNVLERLLRLRQIC 503

Query: 860  ---SCC---VAGHIKVTDAGEDI----------QETMDVLVENGLDPLSQEYAFIKYNLL 903
               + C   V+  +K+ D  E +          QE + + +E      SQE   I Y+  
Sbjct: 504  NHWTLCKERVSDILKLLDEHEVVPLNDKNRGLLQEALRLYIE------SQEECAICYDNP 557

Query: 904  NGG--NCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIEL 961
            N       +H+ C  C+                + + P    + +  +   P P+D  + 
Sbjct: 558  NDPVITTCKHVFCRGCIIR----------AIQIQHKCPMCRNKLDETSLLEPAPEDAGDE 607

Query: 962  QPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGM 1021
            +    +  ++ T     + +  +    +   KV++FSQ+   ++++E QL   G+ +  +
Sbjct: 608  EDFDAESQSSKTEAMMQILKATMRKEGS---KVVVFSQWTSFLNIVEAQLKADGMGYTRI 664

Query: 1022 YSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVI 1080
               M +  + K+++    D     +L      S+GL+L     V L +  W  ++E+Q I
Sbjct: 665  DGSMKADKRDKAIEALDSDPKTRIMLASLAVCSVGLNLVAADTVILSDSWWAPAIEDQAI 724

Query: 1081 SRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             R HR+G TR   +  L M G+VEE++L+ 
Sbjct: 725  DRVHRLGQTRETTIFRLVMEGSVEERVLDV 754



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 8/87 (9%)

Query: 163 MKLKLFPHQQAAVEWMLHRE---WNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAP 219
           +K +L P+Q   + WM  RE     AE  +  + + L      +F  N  SG   T  AP
Sbjct: 176 LKAQLLPYQLQGLAWMTSREKPQLPAEGSQDSVQLWLHQSKKKFF--NVASG-FVTSIAP 232

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLIL 246
            +    GG+  D+ GLGKT+  +SLIL
Sbjct: 233 KL--LSGGILADDMGLGKTLQIISLIL 257


>gi|348582101|ref|XP_003476815.1| PREDICTED: helicase-like transcription factor-like [Cavia porcellus]
          Length = 1004

 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 248/542 (45%), Gaps = 78/542 (14%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TLI+ P  ++ +W  Q+ QH++P   L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 471  RTTLIICPLSVLSNWIDQLGQHIKPEVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILT 530

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 531  HDYGTKGDSPLHGIKWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 587

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 588  ---LKDLWSLLSFLKLKPF-LDREWWHRTIQRPVTMGDEAGLRRLQSLIKNITLRRTKTS 643

Query: 793  ------LQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRR----NILMADWNDPSHV 838
                  +  +P     +  +  ++E    Y    NE   T+ R      ++A + D   +
Sbjct: 644  KIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGKATIGRYFNEGTVLAHYADVLGL 703

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAF- 897
              LL  +Q       + N+  S   +G+    D  + + + M +++ +G D   +E A  
Sbjct: 704  --LLRLRQICCHIHLLTNVVASSGPSGNDTPEDLRKTLIKKMKLILSSGSD---EECAVC 758

Query: 898  ---IKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV 954
               + + ++   +C  H+ C  C+                       + + E P+PK P+
Sbjct: 759  LDSLTFPVIT--HCA-HVFCKPCICQ---------------------VIQNEQPHPKCPL 794

Query: 955  ------PQDLIELQP----------SYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIF 997
                    DL+E  P          S  +W++++      L    +E  K  P+ K ++ 
Sbjct: 795  CRNDIHGNDLLECPPEELASDSEEMSNVEWTSSSKI--NALMHALIELRKKNPNIKSLVV 852

Query: 998  SQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSASL 1054
            SQF   + +IE  L  +G  F  +   M    +++S+  F++ A+    + LL   +  +
Sbjct: 853  SQFTAFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTAAGSPTIMLLSLKAGGV 912

Query: 1055 GLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDT 1114
            GL+L   +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ +Q+T
Sbjct: 913  GLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNT 971

Query: 1115 DR 1116
             R
Sbjct: 972  KR 973



 Score = 45.8 bits (107), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L  HQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLSHQKQALAWMISRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKERP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GVLADDMGLGKTLTAIAVIL 309


>gi|134079366|emb|CAK96995.1| unnamed protein product [Aspergillus niger]
          Length = 910

 Score =  147 bits (370), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 253/550 (46%), Gaps = 62/550 (11%)

Query: 596  ALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSA 654
            AL L+  +P D +R    + TL+V P  L+  W+++I   V    ++ + V+  + +   
Sbjct: 298  ALMLSNRKPADGLRRPF-KTTLVVAPLALIKQWESEISDKVENSHRMRVLVYHGNARAKG 356

Query: 655  HSLAWDYDVVITTFNRLSAEWGRR----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQ 710
                 DYDVVITT+  L++E G +    KKSP+  V+W R++LDE HT+ +        Q
Sbjct: 357  TDKLEDYDVVITTYGTLTSEHGAKDKNNKKSPIFSVYWYRIILDEAHTIKN--RNAKATQ 414

Query: 711  MAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEM 770
             A SL A  RW L+GTP  N     L  LQ ++KFL  + +  +  AW   I++P    +
Sbjct: 415  AAYSLDAEYRWCLSGTPMQNN----LEELQSLIKFLRIKPF-NDLAAWKEQIMKP----I 465

Query: 771  EEGRSRL----LQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTY--NELVVTVR 824
              GR  L    LQ+  +  +  R  D+      +K     N  ++ +G +     V+ V 
Sbjct: 466  ANGRGGLAIERLQIYLKIFMKRRTKDVLKQNANLKPSE--NGQKKSSGFHIVKREVIKVE 523

Query: 825  RNILMADWN--------DPSHVESLLNPKQWKFRSTTIRNLRL--SCCVAGHIKVTDAGE 874
             + +  + N          + +E ++  ++  +    +  LRL  SC     +K      
Sbjct: 524  ADFMPGEMNFYQRLEQRTENSLEKMMGGEKVDYAGALVLLLRLRQSCNHPDLVK-----S 578

Query: 875  DIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCL-----DCVAMDSEKCSLPG 929
            D+ +  DVL++NG    SQ+ A  K + L+    L   L +     D   MD +K    G
Sbjct: 579  DLAQDKDVLLQNGHSG-SQKPA--KNDELDSMADLFGALSVVSKKCDICQMDLKKEEASG 635

Query: 930  CGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLE--SN 987
                   +  E+  R    +P+     D I L        + N  L     R  ++    
Sbjct: 636  GN--SRCKECEVARR----SPEVESDDDDIYLNAG----DDDNKILPSTKIRRLMKILRR 685

Query: 988  KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALL 1047
            ++   K I+FS F   +  IE  L   GI +A     M + ++  SL+  R+++    LL
Sbjct: 686  ESSDHKFIVFSVFTSMLDKIEPFLKRTGIGYARYDGGMRNDHREASLNKLRNNSGTRVLL 745

Query: 1048 MD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQ 1106
                + +LGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  + ++GTVEE+
Sbjct: 746  CSLRAGALGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKMIIKGTVEER 805

Query: 1107 MLEFLQDTDR 1116
            +++ LQD  R
Sbjct: 806  IID-LQDRKR 814


>gi|85105641|ref|XP_962010.1| hypothetical protein NCU05246 [Neurospora crassa OR74A]
 gi|28923601|gb|EAA32774.1| conserved hypothetical protein [Neurospora crassa OR74A]
 gi|118496048|dbj|BAF37540.1| DNA repair and recombination protein RAD5C [Neurospora crassa]
          Length = 1111

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 234/569 (41%), Gaps = 83/569 (14%)

Query: 605  LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVV 664
            L  VRL   +ATL+V P   V +W+ QI+QH++P  L   ++    +         YD+V
Sbjct: 524  LTPVRLN-GKATLLVCPLSTVTNWEEQIKQHIKPDTLSYHIYHGPNRVKDVKKLAQYDLV 582

Query: 665  ITTFNRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
            ITT+  +S+E   R K+     P+ ++ W R++LDE H +     L    +    L AS 
Sbjct: 583  ITTYGSISSELNARAKNKAGIYPLEEIAWFRIVLDEAHMIREQNTLA--FKSICRLQASR 640

Query: 720  RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ 779
            RW +TGTP  N    +L  L  +L FL  + + +  K     I+ PF+    E   +L  
Sbjct: 641  RWAVTGTPIQN----KLEDLASLLAFLRVKPFDEKIKFLQ-YIIAPFKNADPEIVPKLRV 695

Query: 780  LLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVE 839
            L+    +  R  D   +P    E+  L+FT E    Y+    T +  + +         E
Sbjct: 696  LIDTITLR-RLKDKINLPPRTDEIIRLDFTPEEQRVYDWFAKTAKERVSVLTGQAIGQ-E 753

Query: 840  SLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVEN----------GLD 889
             ++  K       +I  LRL C    H K     ED++E   +  +           G  
Sbjct: 754  RIIGGKTMIHILRSILQLRLICA---HGKDLLNEEDLKELQGMTADTAIDIDSDDDSGQL 810

Query: 890  PLSQEYAFIKYNLL---NGGNCLR-------------------------------HILCL 915
             LS+  A+    L+   N  NC R                               H+ C 
Sbjct: 811  VLSESKAYEMLYLMQEGNSDNCARCNTKLGSNEVVDVESERQEDIIGYMVKANCYHVYCN 870

Query: 916  DCVA-MDSEKC------SLPGCGFLYEMQSPEILTRPENPNPK---WPVPQDLIELQPSY 965
             CV  + +E C      + PGC    E+     +   E+   K       QDL     +Y
Sbjct: 871  KCVDHIKNEACPTCSGMTRPGC---IELHRARAMAEHESRTAKVENGDANQDLT----AY 923

Query: 966  RQWSNTNTFLKQDLYRPNLESNKA---LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMY 1022
                     L  +L     +S  A    P K ++FS +  H+ +IE  L  AGI F  + 
Sbjct: 924  SGPHTKTRALVAELLADKQKSEAAPHEPPYKSVVFSGWTSHLDLIELALEDAGITFTRLD 983

Query: 1023 SPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVIS 1081
              M  + +  ++D FR D S   +L+   +  LGL+L+  + V++MEP ++ + E Q + 
Sbjct: 984  GKMTRTARTAAMDKFREDPSVQVILVSIMAGGLGLNLTTASSVYVMEPQFNPAAEAQAVD 1043

Query: 1082 RAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            R HR+G  RP+      M  + EE+ML  
Sbjct: 1044 RVHRLGQKRPVRTVRYIMANSFEEKMLRL 1072


>gi|356565705|ref|XP_003551078.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            [Glycine max]
          Length = 1009

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 154/574 (26%), Positives = 255/574 (44%), Gaps = 74/574 (12%)

Query: 603  EPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS-AHSLAWDY 661
            +P+       S   LI+ P  L+  WK +I+ H  PG L L+V     +P  A SLA + 
Sbjct: 459  KPMKQKNALTSGGNLIICPMTLLGQWKAEIETHAHPGSLSLYVHYGQSRPKDAKSLA-EN 517

Query: 662  DVVITTFNRLSAEWGRRK---KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
            DVVITT+  L++E+          +  + W RV+LDE HT+ SS +  +    A +L + 
Sbjct: 518  DVVITTYGILASEFSSENAEDNGGLFSIRWFRVVLDEAHTIKSSKSQISF--AAAALISD 575

Query: 719  NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL 778
             RW LTGTP  N+    L  +  +L+FL  E +G +   W+  I +PFE   E G   + 
Sbjct: 576  RRWCLTGTPIQNS----LEDIYSLLRFLRIEPWG-HWAWWNKLIQKPFEGGDERGLKLVQ 630

Query: 779  QLLHRCMISARK--TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMAD 831
             +L   M+   K  TD +  P+ +      +V +   TE     Y  L    +R+ +  D
Sbjct: 631  SILKPIMLRRTKHSTDREGKPILVLPPADTQVIYCEPTEAEKDFYGAL---FKRSKVKFD 687

Query: 832  W---------NDPSHVESLLNPKQ-----------------WKFRSTTIRNLRLSCCVA- 864
                      N  S +E LL  +Q                         R LR +   + 
Sbjct: 688  QFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFADLNKLAKRFLRGTYTASE 747

Query: 865  GHIKVTDAGEDIQETMDVLV--ENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDS 922
            G +K T +   +QE ++ L   E G  P+  E  F    L        H LC +C+    
Sbjct: 748  GEVKDTPSRAYVQEVVEELRKGEQGECPICLE-VFEDAVLTPCA----HRLCRECLLSSW 802

Query: 923  EKCSLPGCGFLYEMQSP-EILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYR 981
               +   C    +  S  +++T P     +  + ++ +E        S   T L  +L  
Sbjct: 803  RNATSGLCPVCRKTISRLDLITAPTENRFQVDIEKNWVE--------SCKVTVLLNEL-- 852

Query: 982  PNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDA 1041
             NL S+ +   K I+FSQ+   + +++   T   I F  +   ++   + K +  F  D+
Sbjct: 853  ENLRSSGS---KSIVFSQWTAFLDLLQIPFTRNNISFVRLDGTLNLQQREKVIKQFSEDS 909

Query: 1042 SCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR 1100
            + L LLM   +  +G++L+  +  F+M+P W+ ++EEQ + R HR+G T+ + +    ++
Sbjct: 910  NTLVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKKVAIRRFIVK 969

Query: 1101 GTVEEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            GTVEE+M E +Q   R +R++   L   E   AR
Sbjct: 970  GTVEERM-EAVQ--ARKQRMISGALTDQEVRTAR 1000



 Score = 45.8 bits (107), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 166 KLFPHQQAAVEWMLHREWNAEV-----LRHPLY--IDLATEDGFYFYVNTVSGDIATGTA 218
           +L P+Q+ A+ WM+  E    +       HP +    LA +     Y+N  SG+      
Sbjct: 326 ELRPYQKQALYWMIQMEKGQSMDETATTLHPCWEAYHLADKRELVIYLNAFSGEATIEFP 385

Query: 219 PTMRDFHGGMFCDEPGLGKTITALSLILKTQG 250
            T++   GG+  D  GLGKTI  +SL++   G
Sbjct: 386 STLQMARGGILADAMGLGKTIMTISLLVAHSG 417


>gi|378733040|gb|EHY59499.1| hypothetical protein HMPREF1120_07487 [Exophiala dermatitidis
            NIH/UT8656]
          Length = 1094

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 162/636 (25%), Positives = 267/636 (41%), Gaps = 120/636 (18%)

Query: 549  ILGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSV 608
            +LG   A +  G  K  QA  L+              T +  AF  A +   + E  D++
Sbjct: 468  VLGGLLA-DVMGLGKTLQALSLVAST-----------TGEAKAFGQAKV---VREKSDNI 512

Query: 609  RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
             L  + ATLI+ P+  V +W+ QI QH++PG +  +V+    +     +   YD+VI T+
Sbjct: 513  LLSNTCATLIICPTSTVKNWEDQIVQHIKPGTMTHYVYHGPGRERNPFILSKYDIVIATY 572

Query: 669  NRLSAEW-GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
              +++E+ GR    P+ Q++W R++LDE HT+     L +  Q   SL A  RW LTGTP
Sbjct: 573  GVVASEFSGRSSAIPLRQLNWFRIILDEAHTIREQKALQS--QAVYSLAAERRWCLTGTP 630

Query: 728  TPNTPNSQLSHLQPMLKFLHEEAYGQ----NQ------KAWDGGILRPFEAEMEEGRSRL 777
              N    +L  L  + +FL    Y      NQ      +A D G L+     ++     L
Sbjct: 631  IQN----RLDDLGSLTRFLRLYPYDTAGRFNQYIRGPAQAGDPGFLKALRVFVDS--FTL 684

Query: 778  LQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGT-YNELVVTVRRNILMADWNDPS 836
             +L  R  +  R+  +  +    +E    +F +E A     EL  T  +N  +       
Sbjct: 685  RRLRDRIDLPKREDFVDRLEFSREERQLHDFFKEIAHVKIKELASTKEKNSGVQ-----H 739

Query: 837  HVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQ--------ETMDVLVENGL 888
            HV           R   I  LRL C    H +    G+D++        + +DV  E+ L
Sbjct: 740  HV----------LRG--IMTLRLICA---HGRDLLKGKDLEKLKGISAADAIDVDSEDAL 784

Query: 889  DPLSQEYAFIKYNLLNGG---NCLR------------------------------HILCL 915
              +S+  A+   NL+      NC +                               ++C 
Sbjct: 785  PTISRRAAYESLNLMAEAQLDNCRKCEKRVSSDTVQSEEMEDEEHRIRCFVLPCFDLVCA 844

Query: 916  DCVAMDSEKCSLPGCGFLYEMQSPEILTR---------PENPNPKWPVPQDLI----ELQ 962
            DC   + EK +       + +Q P   T+                +  P D I    E  
Sbjct: 845  DC--FEPEKAAFDSLPNDHPIQCPFCSTQIAAQYVGFSGSTAREVYVAPDDNIAQGDEAS 902

Query: 963  PSYRQWSNTNT-FLKQDLY------RPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAG 1015
            P      +T T  L QD+       +P LE+    P K ++FS+F  H+ +I + L+  G
Sbjct: 903  PEVYTGPHTKTRALLQDIAVMTEESKP-LEAAGEPPLKCVVFSEFTSHLDLIGKALSDNG 961

Query: 1016 IKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRS 1074
              F  +   M  + + +++D    D S   LL    +A  GL+L+  +R F+MEP+W+ +
Sbjct: 962  YSFVRIDGTMSLNARKQAMDALESDNSVRILLASIKAAGQGLNLTAASRAFIMEPMWNPA 1021

Query: 1075 MEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             E Q + R +R+G  RP+ V+   MR ++E +++E 
Sbjct: 1022 AEAQAVDRIYRIGQRRPVLVKRYQMRDSIEGKIVEL 1057


>gi|218194432|gb|EEC76859.1| hypothetical protein OsI_15041 [Oryza sativa Indica Group]
          Length = 1138

 Score =  146 bits (368), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 232/568 (40%), Gaps = 89/568 (15%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
             TLI+ P  L+  WK +++ H  PG L +FV+    + +       + VV+TT+  L + 
Sbjct: 603  GTLIICPMALLGQWKDELEAHSAPGALSVFVYYGGDRTTDLRFMAQHSVVLTTYGVLQSA 662

Query: 675  WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
                  S   ++ W RV+LDE HT+ S    T   + A  LT+  RW LTGTP  N    
Sbjct: 663  HKNDGSSIFHRIDWYRVVLDEAHTIKSP--RTKAARAAYELTSHCRWCLTGTPLQNN--- 717

Query: 735  QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK---- 790
             L  L  +L FLH E +G +   W+  I RP+E   E G   +  +L   M+   K    
Sbjct: 718  -LEDLFSLLCFLHVEPWG-DASWWNKLIQRPYENGDERGLKLVRAILRPLMLRRTKETKD 775

Query: 791  ---TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMAD--------WNDPSHVE 839
                 +  +P    E+     +E+    Y  L    RR+ +  D         N+ +++ 
Sbjct: 776  KMGNPILVLPPANIEIVECEQSEDERDFYEAL---FRRSKVQFDKFVAQGSVLNNYANIL 832

Query: 840  SLLNPKQWKFRSTTIRNLRL-SCCVAGHIKVTDAGEDIQETMDVLVENGLD--------- 889
             LL              LRL  CC    + ++ A       +D L +  LD         
Sbjct: 833  ELL--------------LRLRQCCDHPFLVISRADTQKYTDLDELAQRFLDGVQRDSARR 878

Query: 890  --PLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDS----------EKCSL-----PGCGF 932
              P SQ Y       +  G      +CL+  + D            +C L     P  G 
Sbjct: 879  SAPPSQAYVEEVVEEIRQGATTECPICLESASDDPVLTPCAHRMCRECLLSSWRTPSGGP 938

Query: 933  LYEMQSP----EILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNK 988
                +SP    E++T P          Q   ++ P    W ++   +K       L+  +
Sbjct: 939  CPLCRSPITKSELITLPS---------QCRFQVDPE-NNWKDSCKVIKLIKILEGLQEKR 988

Query: 989  ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM 1048
               +K I+FSQF     ++E      GIKF      +   ++ K L  F      L LLM
Sbjct: 989  ---EKSIVFSQFTSFFDLLEVPFNQKGIKFLRFDGKLSQKHREKVLKEFSESKDKLVLLM 1045

Query: 1049 D-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
               +  +GL+L+  + VFLM+P W+ ++EEQ I R HR+G  R + V    ++ TVEE+M
Sbjct: 1046 SLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRAVQVRRFIVKDTVEERM 1105

Query: 1108 LEFLQDTDRCR-RLLKEELVKPEREGAR 1134
                Q    C+ R++   L   E   AR
Sbjct: 1106 ----QKVQACKQRMISGALTDDEVRSAR 1129


>gi|115457136|ref|NP_001052168.1| Os04g0177300 [Oryza sativa Japonica Group]
 gi|113563739|dbj|BAF14082.1| Os04g0177300, partial [Oryza sativa Japonica Group]
          Length = 664

 Score =  146 bits (368), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 151/563 (26%), Positives = 233/563 (41%), Gaps = 79/563 (14%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
             TLI+ P  L+  WK +++ H  PG L +FV+    + +       + VV+TT+  L + 
Sbjct: 129  GTLIICPMALLGQWKDELEAHSTPGALSVFVYYGGDRTTDLRFMAQHSVVLTTYGVLQSA 188

Query: 675  WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
                  S   ++ W RV+LDE HT+ S    T   + A  LT+  RW LTGTP  N    
Sbjct: 189  HKNDGSSIFHRIDWYRVVLDEAHTIKSP--RTKAARAAYELTSHCRWCLTGTPLQNN--- 243

Query: 735  QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK---- 790
             L  L  +L FLH E +G +   W+  I RP+E   E G   +  +L   M+   K    
Sbjct: 244  -LEDLFSLLCFLHVEPWG-DASWWNKLIQRPYENGDERGLKLVRAILRPLMLRRTKETKD 301

Query: 791  ---TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMAD--------WNDPSHVE 839
                 +  +P    E+     +E+    Y  L    RR+ +  D         N+ +++ 
Sbjct: 302  KMGNPILVLPPANIEIVECEQSEDERDFYEAL---FRRSKVQFDKFVAQGSVLNNYANIL 358

Query: 840  SLLNPKQWKFRSTTIRNLRL-SCCVAGHIKVTDAGEDIQETMDVLVENGLD--------- 889
             LL              LRL  CC    + ++ A       +D L +  LD         
Sbjct: 359  ELL--------------LRLRQCCDHPFLVISRADTQKYTDLDELAQRFLDGVQRDSARR 404

Query: 890  --PLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDS--EKCSLPGCG--FLYEMQSPEILT 943
              P SQ Y       +  G      +CL+  + D     C+   C    L   ++P    
Sbjct: 405  SAPPSQAYVEEVVEEIRQGATTECPICLESASDDPVLTPCAHRMCRECLLSSWRTPS--- 461

Query: 944  RPENPNP--KWPVPQ-DLIELQPSYR-------QWSNTNTFLKQDLYRPNLESNKALPDK 993
                P P  + P+ + +LI L    R        W ++   +K       L+  +   +K
Sbjct: 462  --GGPCPLCRSPITKSELITLPSQCRFQVDPENNWKDSCKVIKLIKILEGLQEKR---EK 516

Query: 994  VIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA- 1052
             I+FSQF     ++E      GIKF      +   ++ K L  F      L LLM   A 
Sbjct: 517  SIVFSQFTSFFDLLEVPFNQKGIKFLRFDGKLSQKHREKVLKEFSESKDKLVLLMSLKAG 576

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
             +GL+L+  + VFLM+P W+ ++EEQ I R HR+G  R + V    ++ TVEE+M    Q
Sbjct: 577  GVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRAVQVRRFIVKDTVEERM----Q 632

Query: 1113 DTDRCR-RLLKEELVKPEREGAR 1134
                C+ R++   L   E   AR
Sbjct: 633  KVQACKQRMISGALTDDEVRSAR 655


>gi|327266997|ref|XP_003218289.1| PREDICTED: helicase-like transcription factor-like [Anolis
            carolinensis]
          Length = 978

 Score =  146 bits (368), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 138/538 (25%), Positives = 241/538 (44%), Gaps = 83/538 (15%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            + TLI+ P  ++ +W  Q +QHV P  QL+L+V+   ++     +    D+V+TT++ L+
Sbjct: 451  KTTLIICPLSVLSNWIDQFEQHVDPDVQLNLYVYYGSERSKDPGVLSSQDIVLTTYSVLA 510

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            +++G R  SP+  + WLRV+LDEGHT+ +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 511  SDYGTRSNSPLHNLKWLRVVLDEGHTIRNP--NAQQTKAVLDLEAQRRWVLTGTPIQNS- 567

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L  L  +L FL  + +   Q  W   I RP     + G  RL  L+    +   KT 
Sbjct: 568  ---LKDLWSLLSFLKLKPFADKQ-WWHRTIQRPVTMGDQGGLKRLQSLIKSITLRRTKTS 623

Query: 793  ------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQ 846
                  +  +P     +  + FTEE    YN +     +N  MA      +  ++L+  +
Sbjct: 624  KVKGKPVLKLPERKVFIQHITFTEEENVNYNSV-----KNESMAAIRRYFNEGTILS--K 676

Query: 847  WKFRSTTIRNLRLSCC-------------VAGHIKVTDAGEDIQETMDVLVENGLDPLSQ 893
            +      +  LRL CC             V G+       E + E M +++ +GLD    
Sbjct: 677  YADVLGVLLRLRLLCCHPSLCVSASSSSDVEGNSTPEMLREKLIEKMKLVLSSGLD---- 732

Query: 894  EYAFIKYNLLNG---GNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNP 950
            E   I  + LN     +C  H+ C  C+                     E++ R E  N 
Sbjct: 733  EECAICLDSLNFPVITHCA-HVFCKPCIC--------------------EVIQR-EKANA 770

Query: 951  KWPVPQDLIELQ--------------PSYRQWSNTNTFLKQDLYRPNLESNKALPD-KVI 995
            K P+ +  + L+               + + W +++      L    +E  K  P  K +
Sbjct: 771  KCPLCRKEVGLKHLVECPLEESDSGRKTDQGWVSSSKI--NALMHALIELRKQNPTVKSL 828

Query: 996  IFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSA 1052
            I SQF + + +IE  L  +G  F  +   M    +++++  F+ + +    + LL   + 
Sbjct: 829  IISQFTKFLSLIEIPLKESGFAFTRLDGSMTRKKRVEAIRHFQSNETGSPTVMLLSLKAG 888

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             +GL+L+  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ 
Sbjct: 889  GVGLNLTAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQDVIITKFIVKNSVEENMLKI 946



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 19/124 (15%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE N E+   P +     E   YFY NTV+ + A    P   +  G
Sbjct: 236 LLPHQKQALAWMVSRENNQEL--PPFW----EERENYFY-NTVT-NFAEKNRP--ENVLG 285

Query: 227 GMFCDEPGLGKTITALSLILKT---------QGTLADPPDGVKIIWCTHNGDPRCGYYDL 277
           G+  D+ GLGKT+T +++IL +         Q       +       T+  +P+CG+ + 
Sbjct: 286 GILADDMGLGKTLTMIAVILTSFHGGQPLPVQKKSNQVKEECVPTAKTYMKEPKCGFQEN 345

Query: 278 SGDK 281
           + D+
Sbjct: 346 TSDR 349


>gi|336471781|gb|EGO59942.1| hypothetical protein NEUTE1DRAFT_80472 [Neurospora tetrasperma FGSC
            2508]
 gi|350292897|gb|EGZ74092.1| DNA repair and recombination protein RAD5C [Neurospora tetrasperma
            FGSC 2509]
          Length = 1111

 Score =  146 bits (368), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 233/569 (40%), Gaps = 83/569 (14%)

Query: 605  LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVV 664
            L  VRL   +ATL+V P   V +W+ QI+QH++P  L   ++    +         YD+V
Sbjct: 524  LTPVRLN-GKATLLVCPLSTVTNWEEQIKQHIKPDTLSYHIYHGPNRVKDVKKLAQYDLV 582

Query: 665  ITTFNRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
            ITT+  +S+E   R K+     P+ ++ W R++LDE H +     L    +    L AS 
Sbjct: 583  ITTYGSISSELNARAKNKAGIYPLEEIAWFRIVLDEAHMIREQNTLA--FKSICRLQASR 640

Query: 720  RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ 779
            RW +TGTP  N    +L  L  +L FL  + + +  K     I+ PF+    E   +L  
Sbjct: 641  RWAVTGTPIQN----KLEDLASLLAFLRVKPFDEKIKFLQ-YIIAPFKNADPEIVPKLRV 695

Query: 780  LLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVE 839
            L+    +  R  D   +P    E+  L+FT E    Y+    T +  + +         E
Sbjct: 696  LIDTITLR-RLKDKINLPPRTDEIIRLDFTPEEQRVYDWFAKTAKERVSVLTGQAIGQ-E 753

Query: 840  SLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVEN----------GLD 889
             ++  K       +I  LRL C    H K     ED++E   +  +           G  
Sbjct: 754  RIIGGKTMIHILRSILQLRLICA---HGKDLLNEEDLKELQGMTADTAIDIDSDDDSGQP 810

Query: 890  PLSQEYAFIKYNLL---NGGNCLR-------------------------------HILCL 915
              S+  A+    L+   N  NC R                               H+ C 
Sbjct: 811  VPSESKAYEMLYLMQEGNSDNCARCNTKLGSNEVVDVESERQEDIIGYMVKANCYHVYCN 870

Query: 916  DCVA-MDSEKCSL------PGCGFLYEMQSPEILTRPENPNPK---WPVPQDLIELQPSY 965
             CV  + +E CS       PGC    E+     +   E+   K       QDL     +Y
Sbjct: 871  KCVDHIKNEACSTCSGMTRPGC---IELHRARAMAEHESRTAKVENGDANQDLT----AY 923

Query: 966  RQWSNTNTFLKQDLYRPNLESNKA---LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMY 1022
                     L  +L     +S  A    P K ++FS +  H+ +IE  L  AGI F  + 
Sbjct: 924  SGPHTKTRALVAELLADKQKSEAAPHEPPYKSVVFSGWTSHLDLIELALEDAGITFTRLD 983

Query: 1023 SPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVIS 1081
              M  + +  ++D FR D S   +L+   +  LGL+L+  + V++MEP ++ + E Q + 
Sbjct: 984  GKMTRTARTAAMDKFREDPSVQVILVSIMAGGLGLNLTTASSVYVMEPQFNPAAEAQAVD 1043

Query: 1082 RAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            R HR+G  RP+      M  + EE+ML  
Sbjct: 1044 RVHRLGQKRPVRTIRYIMANSFEEKMLRL 1072


>gi|413921913|gb|AFW61845.1| hypothetical protein ZEAMMB73_257563 [Zea mays]
          Length = 1193

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 152/559 (27%), Positives = 239/559 (42%), Gaps = 70/559 (12%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
             TL+V P  L+  WK +++ H   G L +FV     K S+  L   +DVV+TT+  LSA 
Sbjct: 657  GTLVVCPMSLLGQWKDELEAHSAQGALSVFVHYAGDKTSSLMLMAQHDVVLTTYGVLSAA 716

Query: 675  WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
                  S   ++ W R++LDE HT+ S    T   Q A  L +  RW LTGTP  N    
Sbjct: 717  CKTECNSIFHRMDWYRIVLDEAHTIKSP--KTKSAQAAYRLKSECRWCLTGTPLQNN--- 771

Query: 735  QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ 794
             L  L  +L FLH E +  N K W   I +P+E   + G   +  +L   M+   K    
Sbjct: 772  -LEDLYSLLCFLHVEPWC-NAKWWQRLIQKPYENGDDRGLKLVRAILRPLMLRRTKETKD 829

Query: 795  TI--PLCIKEVTFLNFTE----EHAGTYNELVVTVRRNILMAD--------WNDPSHVES 840
             I  P+ +     +   E    EH   + E +   RR+ +  D         N+ +++  
Sbjct: 830  KIGNPILVLPPARIEVVECEQSEHERDFYEAL--FRRSKVQFDKFVAQGSVLNNYANILE 887

Query: 841  LLNPKQWKFRSTTIRNLRL-SCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQ------ 893
            LL              LRL  CC    + ++ A       ++ L +  L+ + Q      
Sbjct: 888  LL--------------LRLRQCCDHPFLVISRADPKKYADLNQLAQQFLEGVQQSSSGRQ 933

Query: 894  ----EYAFIK--YNLLNGGNCLRHILCLDCVAMDS--EKCSLPGCG--FLYEMQSPEILT 943
                  A+++     +  G  +   +CL+  + D     C+   CG   +   ++P+   
Sbjct: 934  NVVPSLAYVEGVVEEIRQGATMECPICLESASDDPVLTPCAHRMCGECLVSSWRTPD--- 990

Query: 944  RPENPNP---KWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNL----ESNKALPDKVII 996
                P P   +     DLI L    R   +     K       L    ES +   +K I+
Sbjct: 991  --GGPCPLCRRHISKSDLIILPAQSRFQVDAKNNWKDSCKVKTLVTMLESLQRKQEKSIV 1048

Query: 997  FSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLG 1055
            FSQF     ++E + T  GIKF      +   +K K L  F      L L+M   +  +G
Sbjct: 1049 FSQFTSFFDLLEIRFTQKGIKFLRFDGKLSQKHKEKVLKEFSESQDKLVLMMSLKAGGVG 1108

Query: 1056 LDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTD 1115
            L+L+  + VF+M+P W+ ++EEQ I R HR+G  R + V+   ++GTVEE+M +      
Sbjct: 1109 LNLTAASNVFMMDPWWNPAVEEQAIMRIHRIGQKREVRVKRFIVKGTVEERMQQVQM--- 1165

Query: 1116 RCRRLLKEELVKPEREGAR 1134
            R +R++   L   E  GAR
Sbjct: 1166 RKQRMVSGALTDEEIRGAR 1184


>gi|58531994|emb|CAE04094.3| OSJNBa0096F01.3 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 232/568 (40%), Gaps = 89/568 (15%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
             TLI+ P  L+  WK +++ H  PG L +FV+    + +       + VV+TT+  L + 
Sbjct: 597  GTLIICPMALLGQWKDELEAHSTPGALSVFVYYGGDRTTDLRFMAQHSVVLTTYGVLQSA 656

Query: 675  WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
                  S   ++ W RV+LDE HT+ S    T   + A  LT+  RW LTGTP  N    
Sbjct: 657  HKNDGSSIFHRIDWYRVVLDEAHTIKSP--RTKAARAAYELTSHCRWCLTGTPLQNN--- 711

Query: 735  QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK---- 790
             L  L  +L FLH E +G +   W+  I RP+E   E G   +  +L   M+   K    
Sbjct: 712  -LEDLFSLLCFLHVEPWG-DASWWNKLIQRPYENGDERGLKLVRAILRPLMLRRTKETKD 769

Query: 791  ---TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMAD--------WNDPSHVE 839
                 +  +P    E+     +E+    Y  L    RR+ +  D         N+ +++ 
Sbjct: 770  KMGNPILVLPPANIEIVECEQSEDERDFYEAL---FRRSKVQFDKFVAQGSVLNNYANIL 826

Query: 840  SLLNPKQWKFRSTTIRNLRL-SCCVAGHIKVTDAGEDIQETMDVLVENGLD--------- 889
             LL              LRL  CC    + ++ A       +D L +  LD         
Sbjct: 827  ELL--------------LRLRQCCDHPFLVISRADTQKYTDLDELAQRFLDGVQRDSARR 872

Query: 890  --PLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDS----------EKCSL-----PGCGF 932
              P SQ Y       +  G      +CL+  + D            +C L     P  G 
Sbjct: 873  SAPPSQAYVEEVVEEIRQGATTECPICLESASDDPVLTPCAHRMCRECLLSSWRTPSGGP 932

Query: 933  LYEMQSP----EILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNK 988
                +SP    E++T P          Q   ++ P    W ++   +K       L+  +
Sbjct: 933  CPLCRSPITKSELITLPS---------QCRFQVDPE-NNWKDSCKVIKLIKILEGLQEKR 982

Query: 989  ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM 1048
               +K I+FSQF     ++E      GIKF      +   ++ K L  F      L LLM
Sbjct: 983  ---EKSIVFSQFTSFFDLLEVPFNQKGIKFLRFDGKLSQKHREKVLKEFSESKDKLVLLM 1039

Query: 1049 D-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
               +  +GL+L+  + VFLM+P W+ ++EEQ I R HR+G  R + V    ++ TVEE+M
Sbjct: 1040 SLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRAVQVRRFIVKDTVEERM 1099

Query: 1108 LEFLQDTDRCR-RLLKEELVKPEREGAR 1134
                Q    C+ R++   L   E   AR
Sbjct: 1100 ----QKVQACKQRMISGALTDDEVRSAR 1123


>gi|357116250|ref|XP_003559895.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Brachypodium distachyon]
          Length = 828

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 233/538 (43%), Gaps = 64/538 (11%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            SR TL+V P  +   W TQ+++H   G L ++++   +      L   YD+VITT++ L 
Sbjct: 292  SRTTLVVCPPSVFSSWVTQLEEHTEAGSLKVYMYHGERTKDKKEL-LKYDIVITTYSILG 350

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             E+G ++ SP+  + W RV+LDE H + +S     + +  I+L A  RW++TGTP  N+ 
Sbjct: 351  IEFG-QEGSPVNDIEWFRVILDEAHVIKNS--AARQTKAVIALNAQRRWVVTGTPIQNSS 407

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT- 791
                  L P++ FL  E +   +  W   I  P     + G SRL  LL    IS R+T 
Sbjct: 408  FD----LYPLMAFLKFEPFSI-KSYWQSLIQSPLVKGDKAGLSRLQNLL--GAISLRRTK 460

Query: 792  -------DLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNP 844
                    L  IP       ++  + E    Y+++ +  R  +L     D S + +    
Sbjct: 461  ETESGSKSLVNIPPKTVVACYIELSSEEREYYDQMELEGRNKMLEFGAGD-SIMRNYSTV 519

Query: 845  KQWKFRSTTIRNLRLSCCV-------AGHIKVTDAGEDIQETMDVLVENG--------LD 889
              +  R   + N    C +          ++      ++ + +  LV++G        L 
Sbjct: 520  LYFILRLRQLCNDVALCPLDMKAWLPGSSLEDVSKNPELLKKLASLVDDGDDFDCPICLS 579

Query: 890  PLSQEYAFIKYNLLNGGNCLRHILCLDCV--AMDSEKCSLPGCGFLYEMQSPEILTRPEN 947
            P S+                 HI C  C+   + S     P C   + +   ++   PE 
Sbjct: 580  PPSKTVI----------TSCTHIYCQTCILKILKSSSSRCPIC--RHALSKEDLFIAPEV 627

Query: 948  PNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALP-DKVIIFSQFLEHIHV 1006
             +P      +L   +P   +       LK+        S K  P  K ++FSQF   + +
Sbjct: 628  QHPDEDGSGNLGSDKPLSSKVQALLELLKR--------SQKEDPLSKSVVFSQFRRMLIL 679

Query: 1007 IEQQLTVAG---IKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTR 1063
            +E  L  AG   ++  G  S    S+ IK   M   D   + L    +A  G++L+  + 
Sbjct: 680  LEGPLKRAGFNILRLDGSMSAKKRSDVIKRFAMVGPDTPTVLLASLKAAGAGINLTAAST 739

Query: 1064 VFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLL 1121
            V+L +P W+  +EEQ + R HR+G  + + V  L ++G++EE++LE     +R +RL+
Sbjct: 740  VYLFDPWWNPGVEEQAMDRVHRIGQKKAVKVVRLLVKGSIEERILEL---QERKKRLI 794



 Score = 47.0 bits (110), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 9/84 (10%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           LF HQ+ A+ W++HRE + ++   P + +   +DG Y  V T     +  T        G
Sbjct: 195 LFEHQKDALGWLVHREESCDL--PPFWEE--DKDGGYQNVLT-----SQKTKERPLPLKG 245

Query: 227 GMFCDEPGLGKTITALSLILKTQG 250
           G+F D+ GLGKT+T LSLI +++ 
Sbjct: 246 GIFADDMGLGKTLTLLSLIARSKA 269


>gi|358384533|gb|EHK22130.1| hypothetical protein TRIVIDRAFT_28957 [Trichoderma virens Gv29-8]
          Length = 880

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 259/552 (46%), Gaps = 76/552 (13%)

Query: 599  LALCEPLDSVRLYL---SRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSA 654
            + L + L  + L L   S +TLIV P  ++ +W+ QI++HV+   Q  + ++   KK +A
Sbjct: 337  MGLGKTLQIISLILTGGSGSTLIVAPVSVMSNWEQQIRRHVKEEHQPSILIYHGAKKVAA 396

Query: 655  HSLAWDYDVVITTFNRLSAEW--GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
              L   Y+VVIT++  L+ E   G  K     + +W RV+LDEGHT+    N+  K  +A
Sbjct: 397  QDL-MAYNVVITSYGTLAKELDNGVSKTLLSTKKNWRRVVLDEGHTI---RNVKTKAALA 452

Query: 713  I-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME 771
               L A +RW+LTGTP  N+    +  LQ ++KFLH     +  + +   I R       
Sbjct: 453  ACELKAQSRWVLTGTPIVNS----VKDLQSLVKFLHITGGIEQPEIFGNAISRKLMMGDR 508

Query: 772  EGRSRLLQLLHRCMISARKTDLQTIPLCI-KEVTFLN---FTEEHAGTYNELVVTVRRNI 827
             G + LLQ L + +   R+ D++ + L + K+  +L+   F  E    Y+ L+   R   
Sbjct: 509  SGEA-LLQSLMQDICLRRRKDMKFVDLKLPKKTEYLHRIAFHPEEKAKYDALLSEARG-- 565

Query: 828  LMADWNDPSHVESLLNPKQWKFRSTTIRNLRL--SCCVAGHIKVTDAGEDIQETMDVLVE 885
            ++ ++   S        ++ +F++   R LRL  SC    H   T   E I + M +L +
Sbjct: 566  VLEEYQAKSQT-----GQKGRFQNVLERLLRLRQSC---NHW--TLCRERIDDLMQMLKD 615

Query: 886  NGLDPL-----------------SQEYAFIKYNLLNG---GNCLRHILCLDCVAMDSE-- 923
              + PL                 SQE   I Y +       NC +H+ C  C+A   +  
Sbjct: 616  QDVVPLTEKNRALLQEALRLYIDSQEECAICYEVPTNPVITNC-QHVFCRHCIARAIQLQ 674

Query: 924  -KCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRP 982
             KC  P C      ++P        P P+    ++      + +Q S T   L+  + R 
Sbjct: 675  HKC--PMC------RNPLTEDNLLEPAPEGAFDKNF----DTEKQSSKTEAMLQ--IVRA 720

Query: 983  NLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS 1042
             L +  +   K++IFSQ+   ++++E+QL  AG+K+  +   M++  + +++D   +D+ 
Sbjct: 721  TLNNQGS---KIVIFSQWTSFLNIVEKQLEGAGLKYCRIDGSMNTEKRDQAIDALDNDSE 777

Query: 1043 CLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRG 1101
               +L      S+GL+L     V L +  W  ++E+Q + R HR+G      +  L M  
Sbjct: 778  TRIMLASLAVCSVGLNLVSADTVILSDSWWASAIEDQAVDRVHRLGQRHETKIWRLVMEN 837

Query: 1102 TVEEQMLEFLQD 1113
            T+EE++L+  Q+
Sbjct: 838  TIEERVLDVQQE 849



 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEV--LRHPLYIDLATEDGFYFYVNTVSGDIATGTAPT 220
           +K  L P+Q   + WM  +E N ++  +       L   D    Y N V+ +  T  APT
Sbjct: 269 LKSTLLPYQLQGLAWMQSKE-NPQLPAVGSDTVTQLWRRDNKGRYWN-VASEFITSKAPT 326

Query: 221 MRDFHGGMFCDEPGLGKTITALSLIL 246
           +  F GG+  D+ GLGKT+  +SLIL
Sbjct: 327 L--FSGGILADDMGLGKTLQIISLIL 350


>gi|359479470|ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            [Vitis vinifera]
          Length = 1029

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 252/570 (44%), Gaps = 86/570 (15%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            S   LI+ P  L+  WK +I+ H +PG L ++V     +     +    DVVITT+  L+
Sbjct: 489  SGGNLIICPMTLLGQWKAEIETHAQPGSLSVYVHYGQGRLKDAKILAQNDVVITTYGVLA 548

Query: 673  AEWG---RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQM-AISLTASNRWLLTGTPT 728
            +E+          +  VHW RV+LDE HT+ SS    +++ M A +L A  RW LTGTP 
Sbjct: 549  SEFSPEHAEDNGGLYSVHWFRVVLDEAHTIKSS---KSQISMAAAALIADRRWCLTGTPI 605

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N     L  +  +L+FL  E +G N   W+  I +PF+   E G   +  +L   M+  
Sbjct: 606  QNN----LEDIYSLLRFLRVEPWG-NWAWWNKLIQKPFDEGDERGLKLVQSILKPIMLRR 660

Query: 789  RK--TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMADW--------- 832
             K  TD +  P+ +      +V +   T      Y  L    +R+ +  D          
Sbjct: 661  TKFSTDREGRPILVLPPADIQVIYCELTSAEKDFYEAL---FKRSKVKFDQFVEQGRVLH 717

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDV------LVEN 886
            N  S +E LL  +Q              CC   H  +  +  D QE  D+       ++ 
Sbjct: 718  NYASILELLLCLRQ--------------CC--DHPFLVMSRGDTQEFSDLNKLAKHFLKG 761

Query: 887  GLDPLSQEY------AFIKYNL--LNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQS 938
            G + L  E       A+I+  +  L  G      +CL+      E   L  C   + +  
Sbjct: 762  GQNALEGETKDLPSRAYIQEVVEELRKGEQGECPICLEAF----EDAVLTPCA--HRLCR 815

Query: 939  PEILTRPENPNPKW-PVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNK--------- 988
              +L    NP   + PV +  I  Q      + T +  + D+ +  +ES+K         
Sbjct: 816  ECLLASWRNPTSGFCPVCRKTISRQDLIT--APTGSRFQIDVEKNWMESSKVAALLLELE 873

Query: 989  ---ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
               ++  K I+FSQ+   + +++  L+ + I F  +   ++   + K +  F  +++ L 
Sbjct: 874  NLCSVGSKSILFSQWTAFLDLLQIPLSRSNISFVRLDGTLNQQQREKVIKQFSEESNILV 933

Query: 1046 LLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            LLM   +  +G++L+  +  F+++P W+ ++EEQ + R HR+G T+ + ++   ++GTVE
Sbjct: 934  LLMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRIHRIGQTKRVMIKRFIVKGTVE 993

Query: 1105 EQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            E+ML       R +R++   L   E   AR
Sbjct: 994  ERMLAV---QARKQRMISGALTDQEVRSAR 1020



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 7/91 (7%)

Query: 163 MKLKLFPHQQAAVEWMLHREWN-----AEVLRHPLY--IDLATEDGFYFYVNTVSGDIAT 215
           ++ +L P+Q+ A+ WM+  E       A    HP +    LA +     Y+N  +GD  T
Sbjct: 343 LQCELRPYQRQALHWMIQLEKGPCMDEAGTTLHPCWDAYRLADKRELVIYLNAFTGDATT 402

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
               T++   GG+  D  GLGKTI  ++L+L
Sbjct: 403 EFPSTLKMARGGILADAMGLGKTIMTIALLL 433


>gi|225440123|ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 139/556 (25%), Positives = 248/556 (44%), Gaps = 72/556 (12%)

Query: 612  LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            +S+ TLIV P  +   W TQ+ +H  P +L ++++  ++   A  L   YD+V+TT++ L
Sbjct: 352  VSKTTLIVCPPSVFSTWVTQLLEHTTPKRLKVYMYYGNRTQEAEELQ-KYDIVLTTYSTL 410

Query: 672  SAE--WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP 729
            + E  W     SP+ ++ W RV+LDE H +  ++N   + Q   +L A  RW++TGTP  
Sbjct: 411  ATEEAWS---GSPVKKIEWWRVILDEAHMI-KNVN-AQQSQAVTNLRAKRRWVVTGTPIQ 465

Query: 730  NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISAR 789
            N      S    ++ FL  E +   +  W   + RP     E+G SRL  L+    IS R
Sbjct: 466  NGTFDLFS----LMAFLRFEPFSI-KSYWQSLVQRPLGQGKEKGLSRLQVLM--ATISLR 518

Query: 790  KTD---LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQ 846
            +T    L  +P    E  F+  + E    Y+++        ++ D+ D   V      + 
Sbjct: 519  RTKDKGLIGLPPKSVETCFVELSAEERELYDQM--EAEGKCVIRDYIDAGSVM-----RN 571

Query: 847  WKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLL--- 903
            +      I  LR  C        TD      +   +L+ N ++ +S     +K  +L   
Sbjct: 572  YSTVLGIILRLRQIC--------TDVALCPSDLRSLLLSNNIEDVSNNPELLKKMVLVLQ 623

Query: 904  NGGN----------------CLRHILCLDCVAMDSEKCSLPGCGFL-YEMQSPEILTRPE 946
            +G +                C  HI C  C+ + + K + P C    + +   ++ + P 
Sbjct: 624  DGEDFDCPICISPPTNIVITCCAHIFCRVCI-LKTLKRTKPCCPLCRHPLSQSDLFSAPP 682

Query: 947  NPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHV 1006
                      D  E+  S    S   T LK      + + N +   K ++FSQF + + +
Sbjct: 683  ESTE-----TDNSEIPSSECTSSKVLTLLK--FLSASRDQNPS--TKSVVFSQFRKMLLL 733

Query: 1007 IEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH---DASCLALLMDGSASLGLDLSFVTR 1063
            +EQ L  AG K   +   M++  + + ++ F     +   + L    ++  G++L+  +R
Sbjct: 734  LEQPLKAAGFKTLRLDGSMNAKRRAQVIEEFGAPGPNGPTVLLASLKASGAGINLTAASR 793

Query: 1064 VFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKE 1123
            V+L+EP W+ ++EEQ + R HR+G    + +  L  R ++EE++LE     +R ++L KE
Sbjct: 794  VYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEERILEL---QERKKKLAKE 850

Query: 1124 ELVKPEREGARSHRTL 1139
                  R G +  R +
Sbjct: 851  AF---GRRGLKDRREV 863



 Score = 47.4 bits (111), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 10/83 (12%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           +K +LF HQ+ A+ W++HRE + E+   P +     ++G Y  V T   +  T   P   
Sbjct: 211 IKSELFLHQKEALGWLVHRENSCEL--PPFW---EKQNGSYVNVLT---NYQTNKRP--E 260

Query: 223 DFHGGMFCDEPGLGKTITALSLI 245
              GG+F D+ GLGKT+T L LI
Sbjct: 261 PLRGGIFADDMGLGKTLTLLCLI 283


>gi|225436359|ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            isoform 2 [Vitis vinifera]
          Length = 1016

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 252/570 (44%), Gaps = 86/570 (15%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            S   LI+ P  L+  WK +I+ H +PG L ++V     +     +    DVVITT+  L+
Sbjct: 476  SGGNLIICPMTLLGQWKAEIETHAQPGSLSVYVHYGQGRLKDAKILAQNDVVITTYGVLA 535

Query: 673  AEWG---RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQM-AISLTASNRWLLTGTPT 728
            +E+          +  VHW RV+LDE HT+ SS    +++ M A +L A  RW LTGTP 
Sbjct: 536  SEFSPEHAEDNGGLYSVHWFRVVLDEAHTIKSS---KSQISMAAAALIADRRWCLTGTPI 592

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N     L  +  +L+FL  E +G N   W+  I +PF+   E G   +  +L   M+  
Sbjct: 593  QNN----LEDIYSLLRFLRVEPWG-NWAWWNKLIQKPFDEGDERGLKLVQSILKPIMLRR 647

Query: 789  RK--TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMADW--------- 832
             K  TD +  P+ +      +V +   T      Y  L    +R+ +  D          
Sbjct: 648  TKFSTDREGRPILVLPPADIQVIYCELTSAEKDFYEAL---FKRSKVKFDQFVEQGRVLH 704

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDV------LVEN 886
            N  S +E LL  +Q              CC   H  +  +  D QE  D+       ++ 
Sbjct: 705  NYASILELLLCLRQ--------------CC--DHPFLVMSRGDTQEFSDLNKLAKHFLKG 748

Query: 887  GLDPLSQEY------AFIKYNL--LNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQS 938
            G + L  E       A+I+  +  L  G      +CL+      E   L  C   + +  
Sbjct: 749  GQNALEGETKDLPSRAYIQEVVEELRKGEQGECPICLEAF----EDAVLTPCA--HRLCR 802

Query: 939  PEILTRPENPNPKW-PVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNK--------- 988
              +L    NP   + PV +  I  Q      + T +  + D+ +  +ES+K         
Sbjct: 803  ECLLASWRNPTSGFCPVCRKTISRQDLIT--APTGSRFQIDVEKNWMESSKVAALLLELE 860

Query: 989  ---ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
               ++  K I+FSQ+   + +++  L+ + I F  +   ++   + K +  F  +++ L 
Sbjct: 861  NLCSVGSKSILFSQWTAFLDLLQIPLSRSNISFVRLDGTLNQQQREKVIKQFSEESNILV 920

Query: 1046 LLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            LLM   +  +G++L+  +  F+++P W+ ++EEQ + R HR+G T+ + ++   ++GTVE
Sbjct: 921  LLMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRIHRIGQTKRVMIKRFIVKGTVE 980

Query: 1105 EQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            E+ML       R +R++   L   E   AR
Sbjct: 981  ERMLAV---QARKQRMISGALTDQEVRSAR 1007



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 9/100 (9%)

Query: 163 MKLKLFPHQQAAVEWMLHREWN-----AEVLRHPLY--IDLATEDGFYFYVNTVSGDIAT 215
           ++ +L P+Q+ A+ WM+  E       A    HP +    LA +     Y+N  +GD  T
Sbjct: 330 LQCELRPYQRQALHWMIQLEKGPCMDEAGTTLHPCWDAYRLADKRELVIYLNAFTGDATT 389

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLIL--KTQGTLA 253
               T++   GG+  D  GLGKTI  ++L+L    +G LA
Sbjct: 390 EFPSTLKMARGGILADAMGLGKTIMTIALLLAHSEKGLLA 429


>gi|297734859|emb|CBI17093.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 252/570 (44%), Gaps = 86/570 (15%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            S   LI+ P  L+  WK +I+ H +PG L ++V     +     +    DVVITT+  L+
Sbjct: 485  SGGNLIICPMTLLGQWKAEIETHAQPGSLSVYVHYGQGRLKDAKILAQNDVVITTYGVLA 544

Query: 673  AEWG---RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQM-AISLTASNRWLLTGTPT 728
            +E+          +  VHW RV+LDE HT+ SS    +++ M A +L A  RW LTGTP 
Sbjct: 545  SEFSPEHAEDNGGLYSVHWFRVVLDEAHTIKSS---KSQISMAAAALIADRRWCLTGTPI 601

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N     L  +  +L+FL  E +G N   W+  I +PF+   E G   +  +L   M+  
Sbjct: 602  QN----NLEDIYSLLRFLRVEPWG-NWAWWNKLIQKPFDEGDERGLKLVQSILKPIMLRR 656

Query: 789  RK--TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMADW--------- 832
             K  TD +  P+ +      +V +   T      Y  L    +R+ +  D          
Sbjct: 657  TKFSTDREGRPILVLPPADIQVIYCELTSAEKDFYEAL---FKRSKVKFDQFVEQGRVLH 713

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDV------LVEN 886
            N  S +E LL  +Q              CC   H  +  +  D QE  D+       ++ 
Sbjct: 714  NYASILELLLCLRQ--------------CC--DHPFLVMSRGDTQEFSDLNKLAKHFLKG 757

Query: 887  GLDPLSQEY------AFIKYNL--LNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQS 938
            G + L  E       A+I+  +  L  G      +CL+      E   L  C   + +  
Sbjct: 758  GQNALEGETKDLPSRAYIQEVVEELRKGEQGECPICLEAF----EDAVLTPCA--HRLCR 811

Query: 939  PEILTRPENPNPKW-PVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNK--------- 988
              +L    NP   + PV +  I  Q      + T +  + D+ +  +ES+K         
Sbjct: 812  ECLLASWRNPTSGFCPVCRKTISRQDLIT--APTGSRFQIDVEKNWMESSKVAALLLELE 869

Query: 989  ---ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
               ++  K I+FSQ+   + +++  L+ + I F  +   ++   + K +  F  +++ L 
Sbjct: 870  NLCSVGSKSILFSQWTAFLDLLQIPLSRSNISFVRLDGTLNQQQREKVIKQFSEESNILV 929

Query: 1046 LLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            LLM   +  +G++L+  +  F+++P W+ ++EEQ + R HR+G T+ + ++   ++GTVE
Sbjct: 930  LLMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRIHRIGQTKRVMIKRFIVKGTVE 989

Query: 1105 EQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            E+ML       R +R++   L   E   AR
Sbjct: 990  ERMLAV---QARKQRMISGALTDQEVRSAR 1016



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 7/91 (7%)

Query: 163 MKLKLFPHQQAAVEWMLHREWN-----AEVLRHPLY--IDLATEDGFYFYVNTVSGDIAT 215
           ++ +L P+Q+ A+ WM+  E       A    HP +    LA +     Y+N  +GD  T
Sbjct: 339 LQCELRPYQRQALHWMIQLEKGPCMDEAGTTLHPCWDAYRLADKRELVIYLNAFTGDATT 398

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
               T++   GG+  D  GLGKTI  ++L+L
Sbjct: 399 EFPSTLKMARGGILADAMGLGKTIMTIALLL 429


>gi|356543536|ref|XP_003540216.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            [Glycine max]
          Length = 1008

 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 156/574 (27%), Positives = 254/574 (44%), Gaps = 74/574 (12%)

Query: 603  EPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS-AHSLAWDY 661
            +P+    + +S   LI+ P  L+  WK +I+ HV PG L L+V     +P  A SLA   
Sbjct: 458  KPMKQKNVLMSGGNLIICPMTLLGQWKAEIETHVHPGSLSLYVHYGQSRPKDAKSLA-QS 516

Query: 662  DVVITTFNRLSAEWGRRK---KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
            DVVITT+  L++E+          +  + W RV+LDE HT+ SS   +     A +L A 
Sbjct: 517  DVVITTYGILASEFSSESAEDNGGLFSIRWFRVVLDEAHTIKSS--KSQISLAAAALIAD 574

Query: 719  NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL 778
             RW LTGTP  N+    L  +  +L+FL  E +G +   W+  I +PFE   E G   + 
Sbjct: 575  RRWCLTGTPIQNS----LEDIYSLLRFLRIEPWG-HWAWWNKLIQKPFEGGDERGLKLVQ 629

Query: 779  QLLHRCMISARK--TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMAD 831
             +L   M+   K  TD +  P+ +      +V +   TE     Y  L    +R+ +  D
Sbjct: 630  SILKPIMLRRTKHSTDREGKPILVLPPADMQVIYCEPTEPEKDFYGAL---FKRSKVKFD 686

Query: 832  W---------NDPSHVESLLNPKQ-----------------WKFRSTTIRNLRLSCCVA- 864
                      N  S +E LL  +Q                         R LR +   + 
Sbjct: 687  QFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFADLNKLAKRFLRGTYSASE 746

Query: 865  GHIKVTDAGEDIQETMDVLV--ENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDS 922
            G +K T +   +QE ++ L   E G  P+  E  F    L        H LC +C+    
Sbjct: 747  GEVKDTPSRAYVQEVVEELRKGEQGECPICLE-VFEDAVL----TPCAHRLCRECLLSSW 801

Query: 923  EKCSLPGCGFLYEMQS-PEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYR 981
               +   C    +  S  +++T P     +  + ++ +E        S   T L  +L  
Sbjct: 802  RNATSGLCPVCRKTISRQDLITAPTENRFQVDIEKNWVE--------SCKVTVLLNEL-- 851

Query: 982  PNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDA 1041
             NL S+ +   K I+FSQ+   + +++   T   I F  +   ++   + K +  F  D 
Sbjct: 852  ENLCSSGS---KSIVFSQWTAFLDLLQIPFTRNNIPFVRLDGTLNQQQREKVIKQFSEDG 908

Query: 1042 SCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR 1100
              L LLM   +  +G++L+  +  F+M+P W+ ++EEQ + R HR+G T+ + +    ++
Sbjct: 909  ETLVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKKVAIRRFIVK 968

Query: 1101 GTVEEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            GTVEE+M E +Q   R +R++   L   E   AR
Sbjct: 969  GTVEERM-EAVQ--ARKQRMISGALTDQEVRTAR 999



 Score = 46.2 bits (108), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 166 KLFPHQQAAVEWMLHREWNAEV-----LRHPLY--IDLATEDGFYFYVNTVSGDIATGTA 218
           +L P+Q+ A+ WM+  E    +       HP +    LA +     Y+N  SG+ +    
Sbjct: 325 ELRPYQKQALYWMIQMEKGQSMDETATTLHPCWEAYHLADKRELVIYLNAFSGEASIEFP 384

Query: 219 PTMRDFHGGMFCDEPGLGKTITALSLILKTQG 250
            T++   GG+  D  GLGKTI  +SL++   G
Sbjct: 385 STLQMARGGILADAMGLGKTIMTISLLVAHSG 416


>gi|325186727|emb|CCA21274.1| Fbox protein putative [Albugo laibachii Nc14]
 gi|325187107|emb|CCA21648.1| Fbox protein putative [Albugo laibachii Nc14]
          Length = 946

 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/308 (34%), Positives = 156/308 (50%), Gaps = 39/308 (12%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S+ TLI+VP  LV+HWK+QI  HVR G L  ++    K          YD+VITTF+RLS
Sbjct: 253 SKTTLIIVPDALVEHWKSQITLHVRYGVLRTYIDYGGKIAVDPEELAAYDIVITTFSRLS 312

Query: 673 AEWG-----------------------------RRKKSPMMQVHWLRVMLDEGHTLGSSL 703
            EW                              R+  SP + V+W+RV++DEGH LG   
Sbjct: 313 DEWRYRRPPSALEERTPDRYGFDGPQGYVNGQLRKGTSPFLMVYWVRVVVDEGHRLGVQ- 371

Query: 704 NLTNKLQMAISLTASNRWLLTGTPTPNTPNSQ-LSHLQPMLKFLHEEAYGQNQ-KAWDGG 761
           + + +LQMA  L +  RW++TGTPTPNT  ++ L  L   L FL +   G +  K W   
Sbjct: 372 SCSYQLQMARGLASDKRWVMTGTPTPNTNTAEDLKFLHGQLVFLRDLPLGSSDGKCWSKA 431

Query: 762 ILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPL-CIKEVTFLNFTEEHAGTYNELV 820
           I RPFE        RL Q L+R MI   K+ +Q++P   ++   ++    E    YN + 
Sbjct: 432 IARPFEKHHPIACFRLKQRLYRNMIRHTKSCVQSVPTEPVRASVYIKAMPEEYAIYNAVA 491

Query: 821 VTVRRNILMADWNDPS-----HVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGED 875
             V  NI + +  DP      H +SLLNP+  K+ +   R+LRL+C  A  +K+T + + 
Sbjct: 492 SAVVTNIFLTNI-DPKLPGKMHPDSLLNPRNRKYAAQLTRSLRLACAGACLLKITLSQKS 550

Query: 876 IQETMDVL 883
             ET++ +
Sbjct: 551 YAETIEFI 558



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 74/121 (61%), Gaps = 1/121 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            KVI+FSQF EHI  I       GI+ A   + + ++ + + L +FR D +   L +    
Sbjct: 591  KVIVFSQFKEHIWRIRVSCAQQGIRCAAFITGLSATERQRQLKLFRCDPTVQVLCLTDVG 650

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
            + GLDLSFV+ +F  + IWD+S+ +QVISRA+R+GA   + VE L M G++EE +L  L 
Sbjct: 651  AHGLDLSFVSHIFFADEIWDKSLADQVISRAYRIGAKNAVVVEQLVMCGSLEE-ILHGLH 709

Query: 1113 D 1113
            D
Sbjct: 710  D 710


>gi|224132088|ref|XP_002328182.1| chromatin remodeling complex subunit [Populus trichocarpa]
 gi|222837697|gb|EEE76062.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 896

 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 237/549 (43%), Gaps = 75/549 (13%)

Query: 603  EPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD 662
            + L   ++ ++   LI+ P  L+  WK +++ H +PG L ++V     +    +     +
Sbjct: 346  DKLKQKKMLVNGGNLIICPVTLLGQWKAELEIHAQPGSLSVYVHYGQSRVKDANFLAQSN 405

Query: 663  VVITTFNRLSAEWGRRK---KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQM-AISLTAS 718
            VVITT+  L++++          +  VHW RV+LDE HT+ SS    +++ M A +L A 
Sbjct: 406  VVITTYGVLASDFSAEDAVGNGGLYSVHWFRVVLDEAHTIKSS---KSQISMAAAALVAD 462

Query: 719  NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL 778
             RW LTGTP  N     +  +  +L+FL  E +G N   W+  + +PFE   E G   + 
Sbjct: 463  RRWCLTGTPIQNN----VEDIYSLLRFLKVEPWG-NWAWWNKLVQKPFEEGDERGLKLVK 517

Query: 779  QLLHRCMISARKTD-------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMAD 831
             +L   M+   KT        +  +P    +V +   TE     Y  L    +  +    
Sbjct: 518  SILKPIMLRRTKTSRDREGRPILVLPPADVQVIYCQLTEAEKDFYEALF--KKSKVKFDQ 575

Query: 832  WNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMD---------- 881
            + +   V  L N     + S     LRL  C      V   G D QE  D          
Sbjct: 576  FVEQGRV--LHN-----YASILELLLRLRQCCDHPFLVMSRG-DTQEYSDLNKLAKRFLK 627

Query: 882  ----VLVENGLDPLSQEYAFIKYNLLNGGN------CLR-----------HILCLDCVAM 920
                VL    ++  S+ Y       L+ G       CL            H LC +C+  
Sbjct: 628  GDQIVLEGEAINVPSRAYIKEVVEELSKGEQGECPICLEACEDAVLTPCAHRLCRECLLA 687

Query: 921  DSEKCSLPGCGFLYE-MQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDL 979
                 S   C    + +   E++T P +   +  + ++ +E        S+    L Q+L
Sbjct: 688  SWRNASSGLCPVCRKAITRQELITAPTDSRFQIDIEKNWVE--------SSKIVALLQEL 739

Query: 980  YRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH 1039
                L  +K+     I+FSQ+   + +++  L+ + I F  +   ++   + + +  F  
Sbjct: 740  EILRLSGSKS-----ILFSQWTAFLDLLQIPLSRSNISFVRLDGTLNQQQRERVIKQFSE 794

Query: 1040 DASCLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLA 1098
            D S L LLM   A  +G++L+  +  F+M+P W+ ++EEQ + R HR+G T+ + +    
Sbjct: 795  DDSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKRVMIRRFI 854

Query: 1099 MRGTVEEQM 1107
            ++GTVEE+M
Sbjct: 855  VKGTVEERM 863



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)

Query: 163 MKLKLFPHQQAAVEWMLHREWN-----AEVLRHPLY--IDLATEDGFYFYVNTVSGDIAT 215
           ++ +L P+Q+ A+ WM+H E       A    HP +    LA +     Y+N  SGD   
Sbjct: 243 LQCELRPYQKQALHWMIHLEKGKCMDEAATTLHPCWEAYHLADKRELVVYLNVFSGDATI 302

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLIL--KTQGTLADPPDGVK 260
               T++   GG+  D  GLGKTI  +SL+L    +G L++  D +K
Sbjct: 303 EFPSTLQMARGGILADAMGLGKTIMTISLLLTHSDKGGLSNSFDKLK 349


>gi|322701736|gb|EFY93485.1| SNF2 family helicase/ATPase, putative [Metarhizium acridum CQMa 102]
          Length = 1158

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 141/569 (24%), Positives = 233/569 (40%), Gaps = 94/569 (16%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            ++TLIV P   V +W+ QI+QHV PG L   ++    +        ++DVVITT+  +S 
Sbjct: 575  KSTLIVCPLSTVTNWEEQIKQHVAPGGLSYHIYHGSSRIKDVDKLAEFDVVITTYGSVSN 634

Query: 674  EWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            E G R+K      P+ ++ W R++LDE H +  S  L  + +    L A  RW +TGTP 
Sbjct: 635  ELGSRRKGKDGIYPLEEIGWFRIVLDEAHMIRESSTL--QFKAMCRLQAERRWAVTGTPV 692

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N    +L  L  +L FL    +    K ++  I+ PF+A   E   +L  L+    +  
Sbjct: 693  QN----RLDDLAALLSFLRLHPFDDRSK-FNRYIVEPFKACDPEIVPKLRVLVDTITLR- 746

Query: 789  RKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI-LMADWNDPSHVESLLNPKQW 847
            R  D   +P     V  LNF+ E    Y       +  + ++A   D       L    +
Sbjct: 747  RLKDKIDLPKREDLVIRLNFSAEERTIYELFARNAQDRVKVLAGVKD----GKALGGNTY 802

Query: 848  KFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDP---------------LS 892
                  I  LRL C           G+D+    D+    G+                 LS
Sbjct: 803  IHILKAILRLRLLCA---------HGKDLLNEEDLAALRGMSAEMAIDIDDDDEDGPTLS 853

Query: 893  QEYAFIKYNLLNGGN---CLR-----------------------------HILCLDCVAM 920
             + A   ++L+   N   C+                              H++C +C   
Sbjct: 854  HQKAHEMFSLMQDTNNDACIECSKKLNAGEGQNLDGEQQDDILGYMTPCFHVVCRNCCRN 913

Query: 921  DSEKCS---LPG--------CGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWS 969
              E+      PG        CG    ++  E+     +     P      +++  + ++ 
Sbjct: 914  YRERAQQFLAPGQNTGPCLICGSHVRLEFVELRRDDVDAEHDGPAKTKAKDIRKRFDKYD 973

Query: 970  NTNTFLK---QDLYRPNLESNKALPD----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMY 1022
              +T  K   +DL +    S +A PD    K ++FS +  H+ +IE  L  AGI F  + 
Sbjct: 974  GPHTKTKALVEDLLKSKAAS-QAYPDEPPFKSVVFSGWTSHLDLIELALKAAGITFVRLD 1032

Query: 1023 SPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVIS 1081
              M  + +  +++ FR D +   +L+   +  LGL+L+    V++MEP ++ + E Q I 
Sbjct: 1033 GSMTRTARTAAMEKFREDNTVDVILVSIMAGGLGLNLTAGNTVYVMEPQYNPAAEAQAID 1092

Query: 1082 RAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            R HR+G  RP+      M  + EE+MLE 
Sbjct: 1093 RVHRLGQKRPVRTIRYIMHDSFEEKMLEL 1121


>gi|367046342|ref|XP_003653551.1| RAD5-like protein [Thielavia terrestris NRRL 8126]
 gi|347000813|gb|AEO67215.1| RAD5-like protein [Thielavia terrestris NRRL 8126]
          Length = 908

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 236/521 (45%), Gaps = 55/521 (10%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            +TLIV P  ++ +W+ QI++HV    +  +  +    + +A     D+ VVIT++  L++
Sbjct: 382  STLIVAPVGVMSNWEQQIKRHVLDEHMPSILTYHGAARQTATKSPRDFGVVITSYGTLTS 441

Query: 674  EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
            E       P+ +V W RV+LDEGH + ++   T   + A  L A +RW+LTGTP  N   
Sbjct: 442  EAA--TDGPLFKVDWRRVVLDEGHQIRNAR--TKAAEAACMLQAQSRWVLTGTPIVNN-- 495

Query: 734  SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDL 793
              +  L  +LKFL      +    ++  I RP  A  E     LLQ L + +   R+ D+
Sbjct: 496  --IRDLHSLLKFLRITGGIEQSDVFNTVIARPL-AVGEARAEALLQSLMKDLCLRRRKDM 552

Query: 794  QTIPLCIKEVT----FLNFTEEHAGTYNELVVTVRRNILMADWNDPSH--------VESL 841
            + + L +   T     + F  +    Y  L+   +  +        S         +E L
Sbjct: 553  KFVDLKLPPKTEYIHRITFWPDEKKKYEALLSEAKGALEEFQSKSSSGQQGRFQGVLERL 612

Query: 842  LNPKQ----WKFRSTTIRNLRLSCCVAGHIKVTDAGEDI-QETMDVLVENGLDPLSQEYA 896
            L  +Q    W      I +L       G +++ D    + Q+ + +++E      SQE  
Sbjct: 613  LRLRQTCNHWTLCKERITDLMKLLEEQGVVQLNDKNRALLQQALQLVIE------SQEEC 666

Query: 897  FIKYNLLNGG---NCLRHILCLDCVAMDSE---KCSLPGCGFLYEMQSPEILTRPENPNP 950
             I  + L      +C +H+ C  C++   E   KC +   G      S + L     P P
Sbjct: 667  PICIDTLKDAVITHC-KHVFCRACISKVIEIQHKCPMCRAGL-----SEDKLV---EPAP 717

Query: 951  KWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQ 1010
            +    +D   L P  +  S T   LK  + +  L++  +   KVI FSQ+   + VI++Q
Sbjct: 718  ERSAAEDGDGLDPETKS-SKTEALLK--ILQATLKNEGS---KVICFSQWTSFLTVIQRQ 771

Query: 1011 LTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVFLMEP 1069
            L  AG  +  +   M++  +  ++    HD +   +L   S  S+GL+L+    V L + 
Sbjct: 772  LDEAGYIYTRIDGSMNAKQRDAAIHALDHDPATRIMLASLSVCSVGLNLAAADTVILADS 831

Query: 1070 IWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             W  ++E+Q + R HR+G TRP  V  L M GTVEE++L+ 
Sbjct: 832  WWAPAIEDQAVDRVHRLGQTRPTTVWRLVMEGTVEERVLDI 872


>gi|336267916|ref|XP_003348723.1| hypothetical protein SMAC_01745 [Sordaria macrospora k-hell]
 gi|380093980|emb|CCC08197.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1110

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 144/561 (25%), Positives = 232/561 (41%), Gaps = 77/561 (13%)

Query: 605  LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVV 664
            L  VRL   +ATL+V P   V +W+ QI+QH++PG L   ++    +         +D+V
Sbjct: 523  LTPVRLN-GKATLLVCPLSTVSNWEEQIKQHIKPGGLSYHIYHGPNRIKDVRQLAQFDLV 581

Query: 665  ITTFNRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
            ITT+  +S+E   R K+     P+ ++ W R++LDE H +     L    +    L AS 
Sbjct: 582  ITTYGSISSELNLRAKNKAGVYPLEEIAWFRIVLDEAHMIREQNTLA--FKSICRLQASR 639

Query: 720  RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ 779
            RW +TGTP  N    +L  L  +L FL  + + +  K     I+ PF+    E   +L  
Sbjct: 640  RWAVTGTPIQN----KLEDLASLLAFLRVKPFDEKIKFLQ-YIIGPFKNADPEIVPKLRV 694

Query: 780  LLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVE 839
            L+    +  R  D   +P    E+  L+FT E    Y+    T +  + +         +
Sbjct: 695  LIDTITLR-RLKDKINLPPRKDEIIRLDFTPEEKRVYDWFAQTAKERVSVLTGQAVGQ-D 752

Query: 840  SLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQE-TMDVLV------ENGLDPLS 892
             ++  K       +I  LRL C     +   D  +++Q  T D  +      E G   LS
Sbjct: 753  RIIGGKTMIHILRSILQLRLICAHGKDLLNADDLKELQGMTADTAIDLDSDDEQGQSVLS 812

Query: 893  QEYAFIKYNLL---NGGNCLR-------------------------------HILCLDCV 918
            +  A+    L+   N  NC R                               H+ C  CV
Sbjct: 813  ESKAYEMLYLMQEGNSDNCARCNTKLGSNEVVDLDSERQEDIVGYMVKANCYHVYCNKCV 872

Query: 919  A-MDSEKCSL------PGCGFLYEMQSPEILTRPENPNPK---WPVPQDLIELQPSYRQW 968
              + +E CS       PGC    E+     +   E+   K     V +DL     +Y   
Sbjct: 873  DHIKNEACSTCAGMTRPGC---IELHRARAMAEHESRTAKVENGDVNKDLT----AYSGP 925

Query: 969  SNTNTFLKQDLYRPNLESNKA---LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPM 1025
                  L  +L     +S  A    P K ++FS +  H+ +IE      GI F  +   M
Sbjct: 926  HTKTRALVAELLADKQKSEAAPHEPPYKSVVFSGWTSHLDLIELAFNDVGIIFTRLDGKM 985

Query: 1026 HSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAH 1084
              + +  ++D FR D S   +L+   +  LGL+L+  + V++MEP ++ + E Q + R H
Sbjct: 986  TRTARTAAMDKFREDPSVQVILVSIMAGGLGLNLTTASSVYVMEPQFNPAAEAQAVDRVH 1045

Query: 1085 RMGATRPIHVETLAMRGTVEE 1105
            R+G  RP+      M  + EE
Sbjct: 1046 RLGQKRPVRTVRYIMANSFEE 1066


>gi|330924634|ref|XP_003300716.1| hypothetical protein PTT_12049 [Pyrenophora teres f. teres 0-1]
 gi|311325001|gb|EFQ91184.1| hypothetical protein PTT_12049 [Pyrenophora teres f. teres 0-1]
          Length = 1117

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 242/587 (41%), Gaps = 119/587 (20%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLA----WDYDVVITTF 668
            SRATL+V P   + +WK QI++H   G+  L  WT +      S+      D+D+++TT+
Sbjct: 537  SRATLLVCPLSTMTNWKEQIKEHFPIGKSTL-KWTRYHGSERFSMTPEKLADHDIILTTY 595

Query: 669  NRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            + ++ +    KK P+  ++W R++LDE HT+    N TN+ + A  +    RW +TGTP 
Sbjct: 596  HIIAKDL-MDKKRPLPYINWFRIVLDEAHTI---RNTTNQSRAACMMMGQRRWAVTGTPV 651

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N    +L  L  +  F+    +  +Q  ++  IL+PF+   +      LQLL   +   
Sbjct: 652  QN----RLEDLGALFNFIKLSPFDTSQ-GFNQWILQPFK-NADPMVVDKLQLLVSAVTIR 705

Query: 789  RKTDL--QTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQ 846
            R  ++  + IP  +  V  L F++E    ++      +R +L           + +  + 
Sbjct: 706  RTKEIIKEEIPKKMDYVVRLAFSKEEQQLHDWFEKDTQRKVLAVTQ------ANRIGGQS 759

Query: 847  WKFRSTTIRNLRLSCC------VAGHIKVTDA---------GEDIQETMDVLVENG---- 887
            +    T I NLRL C           +K TD           ED Q+T  +         
Sbjct: 760  YARILTAILNLRLICAHGRDLLSEDALKTTDGMTYEQPMELEEDKQDTPQLTRHQAYEML 819

Query: 888  --------------------LDPLSQE------------YAFIKYNLLNGGNCLRHILCL 915
                                LDP S +            Y    YNL+    C RH+  L
Sbjct: 820  NLLQSTSADDCHYCDGKKSLLDPDSADEDEEGNVPDIVGYMTTCYNLV----CPRHLKTL 875

Query: 916  -DCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQP----------- 963
             D    D +   L  C    ++  P  L         +   QD I   P           
Sbjct: 876  RDQWKKDIQPDGLTKCPICDDLNRPTALELKRGDFYTYLEEQDKIRKDPKLAKKMGSYTG 935

Query: 964  -------------SYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQ 1010
                          +RQWS+ N         PN       P K I+FS +  H+ +IE  
Sbjct: 936  PHTKTKALLDDLDEFRQWSDQN---------PN-----ERPIKSIVFSSWTTHLDLIEIA 981

Query: 1011 LTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEP 1069
            L  AG     +   M   N+ KS+   R D+S   +L+  G+  LGL+L+   +VF+MEP
Sbjct: 982  LKNAGHTLVRLDGRMTRENRDKSMQALREDSSIRVMLVSIGAGGLGLNLTTANKVFMMEP 1041

Query: 1070 IWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
             ++ + E Q + R HR+G  R + ++   M G+ EE+MLE LQ+  R
Sbjct: 1042 QFNPAAEAQAVDRVHRLGQDREVTIKRFIMNGSFEEKMLE-LQNKKR 1087



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 161 PCMKLKLFPHQQAAVEWMLH--REWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTA 218
           P +  +L+PHQ+ A+ +M+   +E   + +  PL+     + G   YV+ ++G       
Sbjct: 422 PLITTELYPHQKQALHFMVEHEQEITEDGVEDPLWKPHFDDSGRKSYVHRITGHKVPHQP 481

Query: 219 PTMRDFHGGMFCDEPGLGKTITALSLI 245
              R   GG+  DE GLGKT++ LSLI
Sbjct: 482 --QRSL-GGILADEMGLGKTLSILSLI 505


>gi|449501639|ref|XP_004161424.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            [Cucumis sativus]
          Length = 1040

 Score =  142 bits (359), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 242/569 (42%), Gaps = 85/569 (14%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            S   LI+ P  L+  WK +I+ HVRPG L L V     +     +    DVVITT+  L+
Sbjct: 501  SGGNLIICPMTLLGQWKAEIEAHVRPGYLSLHVHYGQTRSKDARVLAQNDVVITTYGVLA 560

Query: 673  AEWGRR--KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI---SLTASNRWLLTGTP 727
            +E+     ++  +  V W RV+LDE H + SS     K Q++I   +L A  RW LTGTP
Sbjct: 561  SEFSAENTEEGGLYSVRWFRVVLDEAHNIKSS-----KSQISIAATALVADRRWCLTGTP 615

Query: 728  TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
              N     L  +  +L+FL  E +G N   W+  I +PFE   E G   +  +L   M+ 
Sbjct: 616  IQNN----LEDIFSLLRFLRIEPWG-NWAWWNKIIQKPFEEGDERGLKLVQSILKPIMLR 670

Query: 788  ARK--TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVES 840
              K   D +  P+ +      +V +   T+     Y  L    R  +    + +   V  
Sbjct: 671  RTKCSKDREGRPILVLPPADVQVIYCGLTDAEKDFYEALF--KRSKVKFDQFVEQGRV-- 726

Query: 841  LLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDV--------------LVEN 886
            L N     + S     LRL  C      V   G D QE  D+               V  
Sbjct: 727  LHN-----YASILELLLRLRQCCDHPFLVMSRG-DTQEYSDLNKLAKRFLKGTPNTQVGE 780

Query: 887  GLDPLSQEYAFIKYNLLNGGN------CLR-----------HILCLDCVAM---DSEKCS 926
            G D  S  Y       L  G       CL            H +C +C+     +S    
Sbjct: 781  GRDLPSHAYVQEVMEELRSGEHGECPICLEVFEDAVLTPCAHRMCRECLLASWRNSSSGL 840

Query: 927  LPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLES 986
             P C      Q  +++T P     +       I+++ ++ + S     + +      LE+
Sbjct: 841  CPVCRKAINRQ--DLITAPTESRFQ-------IDIEKNWVESSKVVALMNE------LET 885

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
             +    K I+FSQ+   + +++  L+ + I F  +   +    + K +  F  D   L L
Sbjct: 886  IRLSGSKSILFSQWTAFLDLLQVPLSRSNIPFLRLDGTLSQQQREKVIKEFSEDNGILVL 945

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            LM   +  +G++L+  +  F+++P W+ ++EEQ + R HR+G T+ + ++   ++GTVEE
Sbjct: 946  LMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRIHRIGQTKSVKIKRFIVKGTVEE 1005

Query: 1106 QMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            +M E +Q   R +RL+   L   E   AR
Sbjct: 1006 RM-EAVQ--ARKQRLISGALTDQEVRSAR 1031



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 7/87 (8%)

Query: 167 LFPHQQAAVEWMLHREWN-----AEVLRHPLY--IDLATEDGFYFYVNTVSGDIATGTAP 219
           L P+Q+ A+ WM+H E       A    HP +    LA E     Y+N+ SG+  T    
Sbjct: 362 LRPYQKQALHWMIHLEKGKFMDEAATTLHPCWEGYRLADEREPVIYLNSFSGEATTEFPS 421

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLIL 246
           T++   GG+  D  GLGKTI  +SL+L
Sbjct: 422 TLQIARGGILADAMGLGKTIMTISLLL 448


>gi|449443398|ref|XP_004139464.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            [Cucumis sativus]
          Length = 1040

 Score =  142 bits (359), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 242/569 (42%), Gaps = 85/569 (14%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            S   LI+ P  L+  WK +I+ HVRPG L L V     +     +    DVVITT+  L+
Sbjct: 501  SGGNLIICPMTLLGQWKAEIEAHVRPGYLSLHVHYGQTRSKDARVLAQNDVVITTYGVLA 560

Query: 673  AEWGRR--KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI---SLTASNRWLLTGTP 727
            +E+     ++  +  V W RV+LDE H + SS     K Q++I   +L A  RW LTGTP
Sbjct: 561  SEFSAENTEEGGLYSVRWFRVVLDEAHNIKSS-----KSQISIAATALVADRRWCLTGTP 615

Query: 728  TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
              N     L  +  +L+FL  E +G N   W+  I +PFE   E G   +  +L   M+ 
Sbjct: 616  IQNN----LEDIFSLLRFLRIEPWG-NWAWWNKIIQKPFEEGDERGLKLVQSILKPIMLR 670

Query: 788  ARK--TDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVES 840
              K   D +  P+ +      +V +   T+     Y  L    R  +    + +   V  
Sbjct: 671  RTKCSKDREGRPILVLPPADVQVIYCGLTDAEKDFYEALF--KRSKVKFDQFVEQGRV-- 726

Query: 841  LLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDV--------------LVEN 886
            L N     + S     LRL  C      V   G D QE  D+               V  
Sbjct: 727  LHN-----YASILELLLRLRQCCDHPFLVMSRG-DTQEYSDLNKLAKRFLKGTPNTQVGE 780

Query: 887  GLDPLSQEYAFIKYNLLNGGN------CLR-----------HILCLDCVAM---DSEKCS 926
            G D  S  Y       L  G       CL            H +C +C+     +S    
Sbjct: 781  GRDLPSHAYVQEVMEELRSGEHGECPICLEVFEDAVLTPCAHRMCRECLLASWRNSSSGL 840

Query: 927  LPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLES 986
             P C      Q  +++T P     +       I+++ ++ + S     + +      LE+
Sbjct: 841  CPVCRKAINRQ--DLITAPTESRFQ-------IDIEKNWVESSKVVALMNE------LET 885

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
             +    K I+FSQ+   + +++  L+ + I F  +   +    + K +  F  D   L L
Sbjct: 886  IRLSGSKSILFSQWTAFLDLLQVPLSRSNIPFLRLDGTLSQQQREKVIKEFSEDNGILVL 945

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            LM   +  +G++L+  +  F+++P W+ ++EEQ + R HR+G T+ + ++   ++GTVEE
Sbjct: 946  LMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRIHRIGQTKSVKIKRFIVKGTVEE 1005

Query: 1106 QMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            +M E +Q   R +RL+   L   E   AR
Sbjct: 1006 RM-EAVQ--ARKQRLISGALTDQEVRSAR 1031



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 7/87 (8%)

Query: 167 LFPHQQAAVEWMLHREWN-----AEVLRHPLY--IDLATEDGFYFYVNTVSGDIATGTAP 219
           L P+Q+ A+ WM+H E       A    HP +    LA E     Y+N+ SG+  T    
Sbjct: 362 LRPYQKQALHWMIHLEKGKFMDEAATTLHPCWEGYRLADEREPVIYLNSFSGEATTEFPS 421

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLIL 246
           T++   GG+  D  GLGKTI  +SL+L
Sbjct: 422 TLQIARGGILADAMGLGKTIMTISLLL 448


>gi|125589589|gb|EAZ29939.1| hypothetical protein OsJ_13993 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 149/568 (26%), Positives = 231/568 (40%), Gaps = 89/568 (15%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
             TLI+ P  L+  WK +++ H  PG L +FV+    + +       + VV+TT+  L + 
Sbjct: 597  GTLIICPMALLGQWKDELEAHSTPGALSVFVYYGGDRTTDLRFMAQHSVVLTTYGVLQSA 656

Query: 675  WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
                  S   ++ W RV+LDE HT+ S    T   + A  LT+  RW LTGTP  N    
Sbjct: 657  HKNDGSSIFHRIDWYRVVLDEAHTIKSP--RTKAARAAYELTSHCRWCLTGTPLQNN--- 711

Query: 735  QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK---- 790
             L  L  +L FLH E +G +   W+  I RP+E   E G   +  +L   M+   K    
Sbjct: 712  -LEDLFSLLCFLHVEPWG-DASWWNKLIQRPYENGDERGLKLVRAILRPLMLRRTKETKD 769

Query: 791  ---TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMAD--------WNDPSHVE 839
                 +  +P    E+     +E+    Y  L    RR+ +  D         N+ +++ 
Sbjct: 770  KMGNPILVLPPANIEIVECEQSEDERDFYEAL---FRRSKVQFDKFVAQGSVLNNYANIL 826

Query: 840  SLLNPKQWKFRSTTIRNLRL-SCCVAGHIKVTDAGEDIQETMDVLVENGLD--------- 889
             LL              LRL  CC    + ++ A       +D L +  LD         
Sbjct: 827  ELL--------------LRLRQCCDHPFLVISRADTQKYTDLDELAQRFLDGVQRDSARR 872

Query: 890  --PLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDS----------EKCSL-----PGCGF 932
              P SQ Y       +  G      +CL+  + D            +C L     P  G 
Sbjct: 873  SAPPSQAYVEEVVEEIRQGATTECPICLESASDDPVLTPCAHRMCRECLLSSWRTPSGGP 932

Query: 933  LYEMQSP----EILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNK 988
                +SP    E++T P          Q   ++ P    W ++   +K       L+  +
Sbjct: 933  CPLCRSPITKSELITLPS---------QCRFQVDPE-NNWKDSCKVIKLIKILEGLQEKR 982

Query: 989  ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM 1048
               +K I+FSQF     ++E      GIKF      +   ++ K L  F      L LLM
Sbjct: 983  ---EKSIVFSQFTSFFDLLEVPFNQKGIKFLRFDGKLSQKHREKVLKEFSESKDKLVLLM 1039

Query: 1049 D-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
               +  +GL+L+  + VFLM+P W+ ++EEQ I R  R+G  R + V    ++ TVEE+M
Sbjct: 1040 SLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIPRIGQKRAVQVRRFIVKDTVEERM 1099

Query: 1108 LEFLQDTDRCR-RLLKEELVKPEREGAR 1134
                Q    C+ R++   L   E   AR
Sbjct: 1100 ----QKVQACKQRMISGALTDDEVRSAR 1123


>gi|340959927|gb|EGS21108.1| helicase-like protein [Chaetomium thermophilum var. thermophilum DSM
            1495]
          Length = 1227

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 142/602 (23%), Positives = 249/602 (41%), Gaps = 106/602 (17%)

Query: 591  AFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK 650
            AFDL  +RL              +ATL++ P   V +W+ QI+QH++   +   ++    
Sbjct: 612  AFDLTPVRLN------------GKATLLICPLSTVTNWEEQIKQHIKADSIRYHIYHGPN 659

Query: 651  KPSAHSLAWDYDVVITTFNRLSAEW-----GRRKKSPMMQVHWLRVMLDEGHTLGSSLNL 705
            +         YD+VITT+  + +E      G+R   P+ ++ W R++LDE HT+     L
Sbjct: 660  RVKDVEELARYDLVITTYGSIVSELNSRIKGKRGIYPLEEIAWFRIVLDEAHTIREQSTL 719

Query: 706  TNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRP 765
                +    L AS RW +TGTP  N    +L  L  +L FL  + +    K +   I++P
Sbjct: 720  A--FKSVCRLQASRRWAVTGTPVQN----KLDDLASLLAFLRLKPFDDRSK-FLQHIIQP 772

Query: 766  FEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRR 825
            F+    E  ++L  L+    +  R  D  ++P    E+ +L+FT E    Y+    + + 
Sbjct: 773  FKVADPEVLTKLRVLIDTITLR-RLKDKISLPERTDEIVYLDFTPEERRIYDWFARSAQE 831

Query: 826  NILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVE 885
             + +   N  +  + L+  K       +I  LRL C    H K   + ED+++   +  +
Sbjct: 832  RVKILTGNVLNQ-DRLVGGKTMIHILRSILQLRLIC---AHGKDLLSDEDLEQLQGMTAD 887

Query: 886  NGLD----------PLSQEYAFIKYNLL---NGGNCLR---------------------- 910
              +D           LS+  A+  + L+      NC R                      
Sbjct: 888  TPIDLDSDDEDKTPVLSENKAYEMFYLMVETGSDNCFRCNIKLGSVEVDDPESDRQDDVL 947

Query: 911  -------HILCLDCVAM---DSEKCSLPGCGF-----------LYEMQSPEI-LTRPENP 948
                   H+ C  C+ +   D    +   C             L+  ++ ++  +R    
Sbjct: 948  GYMAKCFHVYCPSCIKLLRADQYHPTAAECTVCARYDRTAYVELHRNRADQVHESRTAAK 1007

Query: 949  NPKWP-----------------VPQDLIELQPSYRQWSNTNTFLKQDLYRPNL-ESNKAL 990
            NPK P                 +P  +I         + T   + + L+   L E+N + 
Sbjct: 1008 NPKGPYSSTDASTSNNSNNNTAIPNKIIPDDRYSGPHTKTRALIAELLHNKALSEANPSE 1067

Query: 991  PD-KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            P  K ++FS +  H+ +I+  L  AGI +  +   M    +  ++D FR D S   +L+ 
Sbjct: 1068 PPLKSVVFSGWTSHLDLIQIALDNAGITYTRLDGKMSRPARNAAMDAFRDDPSVQVILVS 1127

Query: 1050 -GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +  LGL+L+    V++MEP ++ + E Q I R HR+G  R +      MR + EE+ML
Sbjct: 1128 IMAGGLGLNLTAGNSVYVMEPQFNPAAEAQAIDRVHRLGQKRRVRTVRFIMRDSFEEKML 1187

Query: 1109 EF 1110
            + 
Sbjct: 1188 QL 1189


>gi|164422685|ref|XP_001727986.1| hypothetical protein NCU10809 [Neurospora crassa OR74A]
 gi|157069777|gb|EDO64895.1| predicted protein [Neurospora crassa OR74A]
          Length = 702

 Score =  141 bits (355), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 237/516 (45%), Gaps = 51/516 (9%)

Query: 615  ATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            ATL+VVPS  L+ +W  +I  H+ PG L+L ++    +P +       DVV+TT+  L+A
Sbjct: 202  ATLVVVPSAQLMHNWVAEIASHM-PGALNLILFHGQGRPKSPESMASTDVVLTTYGTLAA 260

Query: 674  EWGRRKKSPMMQ-VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            +    K + ++Q + W RV+LDE H + ++   + + + A SL+ S RW LTGTP  N  
Sbjct: 261  D---HKNARLLQKMEWYRVVLDEAHWIRNAS--SQQFRAATSLSTSRRWCLTGTPIQN-- 313

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
              +L  L  +  FL    Y + +  +   +L P E + ++G +  L+   R     R   
Sbjct: 314  --KLDDLASLAHFLRVPPYPE-KTVFRKYVLEPLE-KGDQGCADPLRSYLRQHCLRRTNK 369

Query: 793  LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI--LMADWNDPSHVESLLNPKQWKFR 850
               +P   ++  +L  + +   TY++++ T +R +  +++  N P  V+   N K   F 
Sbjct: 370  CLNLPNLSEKTVYLQLSMQEQETYDKILSTAKRALDDIVSSANKPKQVK---NEKVTVF- 425

Query: 851  STTIRNLRLSCCVAGHIKVTDAGEDI---QETMDVLVENGLDPLSQEYAFIKYNLLNGGN 907
             TT+ +LR  C +     +  +  D+    E  D+L E                  +G  
Sbjct: 426  FTTLTSLRRLCDLGTLPPIQSSPGDLGQPTEDTDMLCE-----------LCSSQDADGSL 474

Query: 908  CLR-HILCLDCVAMDSEKCSLPGCGFLYEMQSPEILT-RPENPNPKWPVPQDLIELQPSY 965
             L+ H  C +C      + S    G+L     P  ++ R  +P            L  S 
Sbjct: 475  LLKDHQFCPECSRPLRTQRSASNTGYLTPASLPGTVSDRAMSP------------LILSM 522

Query: 966  RQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPM 1025
                +T     +D     L+S   +  K +IFS +   +  + Q +  AGI  A +    
Sbjct: 523  DNGLSTKLLKVRDSVLQALQSQTGI--KHLIFSAWTSSLRYLAQLMQQAGIPHAQIDGRT 580

Query: 1026 HSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAH 1084
             ++ +++ +  F+ D+    LLM  G+ ++GL L+  + V ++EP W+ S+EEQ I RA 
Sbjct: 581  SNAERLRHIKAFQEDSQVPVLLMSIGTGAVGLTLTAASHVHIIEPQWNPSVEEQAIGRAL 640

Query: 1085 RMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRL 1120
            RMG T+ + V    M+GTVE+ +L   Q      R 
Sbjct: 641  RMGQTKEVVVTRYIMKGTVEQSILSLQQKKKNISRF 676


>gi|367023136|ref|XP_003660853.1| RAD5-like protein [Myceliophthora thermophila ATCC 42464]
 gi|347008120|gb|AEO55608.1| RAD5-like protein [Myceliophthora thermophila ATCC 42464]
          Length = 788

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 235/525 (44%), Gaps = 64/525 (12%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            +TLIV P  ++ +W+ QI++HV    L ++ ++    + +A     D+ VV+T++  L++
Sbjct: 264  STLIVAPVGVMSNWEQQIKRHVHEKHLPNVLIYHGSSRQTAAKSLNDFGVVVTSYGTLTS 323

Query: 674  EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
            E       P+ +  W RV+LDEGHT+ ++   T   + A  L A +RW+LTGTP  N   
Sbjct: 324  EAA--AGGPLTKHKWRRVVLDEGHTIRNAK--TKAAEAACKLNAQSRWVLTGTPIVNN-- 377

Query: 734  SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDL 793
              +  L  +LKFL      +    +   I RP  A  + G   LLQ L + +   R+ D+
Sbjct: 378  --IKDLHSLLKFLRITGGIEQSDVFTAVIARPL-AYGDPGAEALLQSLMKDLCLRRRKDM 434

Query: 794  QTIPLCIKEVT----FLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKF 849
            + + L +   T     + F  +    Y  L+   +    + D+   S        ++ +F
Sbjct: 435  KFVDLKLPPKTEYIHRITFWADERKKYEALLSEAQGA--LQDYQAKSKA-----GQKGRF 487

Query: 850  RSTTIRNLRL-SCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLL----- 903
            +    R LRL   C   H   T   E I + M +L E  + PLS E   +    L     
Sbjct: 488  QGVLERLLRLRQTC--NHW--TLCKERITDLMKLLEEQDIVPLSDENRALLQQALQLVIE 543

Query: 904  NGGNC--------------LRHILCLDCVAMDSE---KCSLPGCGFLYEMQSPEILTRPE 946
            +   C               +H  C  C+    E   KC +   G   +        +  
Sbjct: 544  SQEECPVCMEPLTEPVITHCKHFFCRACICKVIEIQHKCPMCRAGLAED--------KLV 595

Query: 947  NPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHV 1006
             P P+    +D      +  + S T   LK  + +  L++  +   KV+IFSQ+   + V
Sbjct: 596  EPAPEHSADED--AGLDTETKSSKTEALLK--ILQATLKNRGS---KVVIFSQWTSFLTV 648

Query: 1007 IEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVF 1065
            I++QL  AG  +A +   M++S +  ++    +D S   +L   S  S+GL+L     V 
Sbjct: 649  IQRQLDEAGYTYARIDGSMNTSQRDAAIRALDNDPSTRIMLASLSVCSVGLNLVSADTVV 708

Query: 1066 LMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            L +  W  ++E+Q + R HR+G TRP  V  L M GTVEE++L+ 
Sbjct: 709  LADSWWAPAIEDQAVDRVHRLGQTRPTTVWRLVMEGTVEERVLDI 753


>gi|361124437|gb|EHK96527.1| putative SWI/SNF-related matrix-associated actin-dependent regulator
            of chromatin subfamily A member 3-like 1 [Glarea
            lozoyensis 74030]
          Length = 1133

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 145/573 (25%), Positives = 244/573 (42%), Gaps = 94/573 (16%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            + TL+V P   + +W+ QI+QHV+PG L  +++    +    +    +D+VITT+  +++
Sbjct: 292  KTTLLVSPLSTIANWEEQIKQHVKPGALKYYIYHGSGRIKDVNKLAQFDLVITTYGSVAS 351

Query: 674  EWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            E+  R K      P+ +++W R++LDE H +      T + +    L AS RW +TGTP 
Sbjct: 352  EFNNRSKQKHGVYPLEEMNWFRIVLDEAHMIRE--QSTQQSKAICRLQASRRWAVTGTPV 409

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N    +L  L  ++ FL  + + + +  +   I+ PF+    E   + L+LL   +   
Sbjct: 410  QN----KLEDLGALMTFLRVKPFDE-KGGFAQYIMAPFKMCDPEILPK-LRLLVDSITLR 463

Query: 789  RKTDLQTIPLCIKEVTFLNFTEEHAGTYNELV--VTVRRNILMADWNDPSHVESLLNPKQ 846
            R  D   +P    E+  L+F+      Y+      + R  +++      +  E  L  + 
Sbjct: 464  RLKDRIDLPQRRDELVKLDFSPAERHLYDVFAKNASDRVKVIV------NQREKSLGGRT 517

Query: 847  WKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLD----------------P 890
            +     +I  LRL C           GED+    D+ V  GL+                 
Sbjct: 518  YVHILQSILRLRLICA---------HGEDLLGEEDLEVMKGLNQASAIELDSDDEDDRPA 568

Query: 891  LSQEYAFIKYNLLNGGN------CLRHILCLDCVAMDSEKCS--------------LPGC 930
            LS + A+  Y L+   N      C R +   D +  +  +                 P C
Sbjct: 569  LSAKQAYDMYQLMIDTNADLCSTCSRKVGVNDNIEAEEGETKEKIIGFMTPCFHIICPNC 628

Query: 931  --GFLYEMQ--------SPEILTRPENPNPKWPV-PQDLIELQPSYRQWSNTNTF----- 974
              GF  +M         S  I+ R       + + P  L E  P  +    T T      
Sbjct: 629  FDGFKAQMDHYSEGRTTSDCIICRQHIKLSYFELKPGGLEEGGPKSKGKKQTKTLENYHG 688

Query: 975  -------LKQDLYRPNLES---NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSP 1024
                   L QDL    +ES   +   P K ++FS +  H+ +I+  L    IK+  +   
Sbjct: 689  PHTKTKALIQDLNNSRMESEILHHEAPIKSVVFSGWTAHLDLIQLALNANNIKYCRLDGK 748

Query: 1025 MHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRA 1083
            M  + +  ++D FR D S L +L+  +A  LGL+L+   +V++MEP ++ + E Q I R 
Sbjct: 749  MTRAARGAAMDAFRDDPSILVILVSITAGGLGLNLTSANKVYVMEPQYNPAAEAQAIDRV 808

Query: 1084 HRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            HR+G  R +      M  + EE+MLE LQD  R
Sbjct: 809  HRLGQKREVTTVRYIMNDSFEEKMLE-LQDKKR 840


>gi|406866683|gb|EKD19722.1| SNF2 family domain-containing protein [Marssonina brunnea f. sp.
            'multigermtubi' MB_m1]
          Length = 1201

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 147/589 (24%), Positives = 256/589 (43%), Gaps = 105/589 (17%)

Query: 605  LDSVRLYLS-RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDV 663
            L+ V L ++ + TL+V P   + +W+ Q++QHV+PG L+ +++    +        ++D+
Sbjct: 608  LEQVPLVMNCKTTLLVSPLSTIANWEEQMKQHVKPGSLNYYIYHGGNRIKDVKRLAEFDI 667

Query: 664  VITTFNRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
            VITT+  +++E+G R K      P+ +++W R++LDE H +      T + +    L+A+
Sbjct: 668  VITTYGSVASEFGNRSKGKPGVYPLEEMNWFRIVLDEAHMIRE--QSTQQSKSICRLSAN 725

Query: 719  NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL 778
             RW +TGTP  N    +L  L  ++ FL  + + + +  +   I+ PF+    E   + L
Sbjct: 726  RRWAVTGTPVQN----RLEDLGALMSFLRIKPFDE-KGGFSQYIMSPFKLCDPEILPK-L 779

Query: 779  QLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHV 838
            +LL   +   R  D   +P    ++  L+F  E    Y          I   + +D   V
Sbjct: 780  RLLVDSITLRRLKDRIDLPKRHDQLVKLDFNPEERHIY---------EIFAKNASDRVKV 830

Query: 839  -----ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGL----- 888
                 E  L+ K +     +I  LRL C           G+D+    D+ V NGL     
Sbjct: 831  IVGSREKSLSGKSYVHILQSILRLRLICA---------HGKDLLNEEDLKVMNGLCKDSA 881

Query: 889  ------------DPLSQEYAFIKYNLLNGGN------CLRHILCLDCVAMDSEKCSLPG- 929
                          LS   A+  YNL+   N      C R I   D  +    K  + G 
Sbjct: 882  IDLDSDDDGDDQPALSSRQAYDMYNLMKETNTDVCLTCQRKIGPSDAESEGESKDEIIGH 941

Query: 930  -----------CGFLYEMQSPEILT-RPENPNP---------KWPVPQDLIELQPSYRQW 968
                       C   Y+ +  E    +P+   P          +P+ Q  ++ Q +Y+Q 
Sbjct: 942  MTPCYHIICNTCIAGYKAEVEEAARGQPQVHCPICSSYIKLFYFPLRQGGLDDQEAYKQK 1001

Query: 969  SN-------TNTF---------LKQDLYRPNLESNKALPD----KVIIFSQFLEHIHVIE 1008
            +         N +         L  DL     ES +A+P     K +IFS +  H+ +I+
Sbjct: 1002 TKEAKRGKEANGYGGPHTKTKALIHDLLLSQQES-QAMPGEPPIKSVIFSGWTAHLDLIQ 1060

Query: 1009 QQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVFLM 1067
              L   GI +  +   M  + +  ++D FR D +   +L+  +A  LGL+L+   +V++M
Sbjct: 1061 IALQENGITYTRLDGKMSRTARGAAMDSFREDPAITVILVSITAGGLGLNLTTANKVYVM 1120

Query: 1068 EPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            EP ++ + E Q + R HR+G  R +      M+ + EE+ML  LQD  +
Sbjct: 1121 EPQYNPAAEAQAVDRVHRLGQKREVTTVRYIMKDSFEEKML-VLQDKKK 1168


>gi|45935136|gb|AAS79594.1| putative DNA repair protein [Ipomoea trifida]
 gi|117166029|dbj|BAF36331.1| hypothetical protein [Ipomoea trifida]
          Length = 1040

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 149/572 (26%), Positives = 247/572 (43%), Gaps = 90/572 (15%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            S   LIV P  L+  WK +I+ H  PG L L++     +          DVV+TT+  L+
Sbjct: 500  SGGNLIVCPMTLLGQWKAEIEMHACPGTLSLYLHYGQSRSKDPKFIAQSDVVLTTYGVLA 559

Query: 673  AEWGR---RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI---SLTASNRWLLTGT 726
            +E+      +   +  V W RV+LDE HT+ SS     K Q++I   +L A  RW LTGT
Sbjct: 560  SEFSSENAEENGGLFSVRWFRVVLDEAHTIKSS-----KSQISIAASALIAERRWCLTGT 614

Query: 727  PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
            P  N     +  +  +L+FL  E +G +   W+  + +PFE   E G  RL+Q + R ++
Sbjct: 615  PIQNN----IEDVYSLLRFLRIEPWG-SWAWWNELVQKPFEEGDERGL-RLVQSILRPIM 668

Query: 787  SAR---KTDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHV 838
              R    TD +  P+ +      +V +   TE     Y  L    R  +    + +   V
Sbjct: 669  LRRTKSSTDREGRPILVLPPADIQVIYCELTEAEKDFYEALF--KRSKVKFDQFVEQGRV 726

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDV------LVENGL---- 888
              L N     + S     LRL  C      V   G D QE  D+       ++ G     
Sbjct: 727  --LHN-----YASILELLLRLRQCCDHPFLVLSRG-DTQEFSDLNKLAKRFLKGGQKTGE 778

Query: 889  ----DPLSQEYAFIKYNLLNGGN------CLR-----------HILCLDCVAMDSEKCSL 927
                D  ++ Y       L  G       CL            H LC +C+         
Sbjct: 779  NHVEDAPTRAYIQEVVEELRKGEQGECPICLEACEDAVLTPCAHRLCRECLLASWRS--- 835

Query: 928  PGCGFL----YEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPN 983
            P  GF       +   E++T P +   +       I+++ ++ + S     L +      
Sbjct: 836  PASGFCPVCRKTVSKQELITAPTDSRFQ-------IDVEKNWVESSKVTALLHE------ 882

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASC 1043
            LE  +A+  K I+FSQ+   + +++  L    I F  +   ++   + K +  F  + S 
Sbjct: 883  LEQLRAVNSKSIVFSQWTAFLDLLQIALARNDISFLRLDGTLNQQQREKVIKRFSEEDSV 942

Query: 1044 LALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGT 1102
            L LLM   +  +G++L+  +  F+++P W+ ++EEQ + R HR+G T+ + ++   ++GT
Sbjct: 943  LVLLMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRVHRIGQTKRVAIKRFIVKGT 1002

Query: 1103 VEEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            VEE+M E +Q   R +R++   L   E   AR
Sbjct: 1003 VEERM-EAVQ--ARKQRMISGALTDQEVRTAR 1031



 Score = 49.3 bits (116), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)

Query: 163 MKLKLFPHQQAAVEWM-----LHREWNAEVLRHPLY--IDLATEDGFYFYVNTVSGDIAT 215
           ++ +L  +Q+ A+ WM     +H   +A+   HP +    LA +     Y+N  SGD  T
Sbjct: 354 LQCELRSYQKQALHWMTQLEQVHSVNDAKTTLHPCWEAYRLADKRDLVIYLNAFSGDATT 413

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
               T++   GG+  D  GLGKTI  ++L+L
Sbjct: 414 EFPSTLQMARGGILADSMGLGKTIMTIALLL 444


>gi|410971232|ref|XP_003992075.1| PREDICTED: helicase-like transcription factor [Felis catus]
          Length = 1007

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 132/538 (24%), Positives = 244/538 (45%), Gaps = 70/538 (13%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 474  RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILT 533

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 534  HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 590

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 591  ---LKDLWSLLSFLKLKPF-LDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTS 646

Query: 793  ------LQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRR----NILMADWNDPSHV 838
                  +  +P     +  +  ++E    Y    NE   T+ R      ++A + D   +
Sbjct: 647  KIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGL 706

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFI 898
              LL  +Q    +  + N   S   +G+    +  + +   M +++ +G D   +E A  
Sbjct: 707  --LLRLRQICCHTHLLTNAVSSSGPSGNDTPEELRKKLIRKMKLILSSGSD---EECA-- 759

Query: 899  KYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV---- 954
                          +CLD + +      +  C  ++       + + E P+PK P+    
Sbjct: 760  --------------ICLDSLTVP----VITHCAHVFCKPCICQVIQNEQPHPKCPLCRND 801

Query: 955  --PQDLIELQP----------SYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQFL 1001
                +L+E  P          S  +W++++      L    ++  K  P+ K ++ SQF 
Sbjct: 802  IHGDNLLECPPEELACDTEKKSNMEWTSSSKI--NALMHALIDLRKKNPNIKSLVVSQFT 859

Query: 1002 EHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSASLGLDL 1058
              + +IE  L  +G  F  +   M    +++S+  F++  +    + LL   +  +GL+L
Sbjct: 860  TFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL 919

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            S  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ +Q+T R
Sbjct: 920  SAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNTKR 976



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + ++   P + +  ++    FY NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKDL---PPFWEQRSD----FYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|345789325|ref|XP_534300.3| PREDICTED: helicase-like transcription factor [Canis lupus
            familiaris]
          Length = 1007

 Score =  139 bits (351), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 243/538 (45%), Gaps = 70/538 (13%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 474  RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILT 533

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 534  HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 590

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 591  ---LKDLWSLLSFLKLKPF-LDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTS 646

Query: 793  ------LQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRR----NILMADWNDPSHV 838
                  +  +P     +  +  ++E    Y    NE   T+ R      ++A + D   V
Sbjct: 647  KIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYAD---V 703

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFI 898
              LL              LR  CC   H+ +T+AG     + +   E     L ++   I
Sbjct: 704  LGLL------------LRLRQICCHT-HL-LTNAGSSSGPSGNDTPEELRKKLIRKMKLI 749

Query: 899  KYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV---- 954
                L+ G+     +CLD + +      +  C  ++       + + E P+ K P+    
Sbjct: 750  ----LSSGSDEECAICLDSLTVP----VITHCAHVFCKPCICQVIQNEQPHAKCPLCRND 801

Query: 955  --PQDLIELQP----------SYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQFL 1001
                +L+E  P          S  +W++++      L    ++  K  P+ K ++ SQF 
Sbjct: 802  IHGDNLLECPPEELACDTEKKSNTEWTSSSKI--NALMHALIDLRKKNPNIKSLVVSQFT 859

Query: 1002 EHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSASLGLDL 1058
              + +IE  L  +G  F  +   M    +++S+  F++  +    + LL   +  +GL+L
Sbjct: 860  TFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL 919

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            S  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ +Q+T R
Sbjct: 920  SAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNTKR 976



 Score = 47.8 bits (112), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + ++   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKDL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|242762199|ref|XP_002340327.1| helicase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218723523|gb|EED22940.1| helicase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 935

 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 231/527 (43%), Gaps = 52/527 (9%)

Query: 604  PLDSVRLYLSRATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD 662
            P D++     RATL++VPS  L+  W  +IQ+H+  G L +F +    +    S    +D
Sbjct: 361  PEDTMAKRRCRATLVIVPSDVLITMWTREIQEHL-AGSLRIFKYHGKGRKKRLSNMGHFD 419

Query: 663  VVITTFNRLSAEWGRR----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
            +VITT+N L+ E G R     +SP+  + W RV+LDE H +      T   +  I L+A 
Sbjct: 420  IVITTYNTLAKEHGMRNSGDNESPLHDIEWYRVILDEAHMI--RRQATTFHRAVIDLSAR 477

Query: 719  NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGR-SRL 777
             RW L+GTP  N+    L+ L  +LKF+    +  +   +   I  PFE    + R +  
Sbjct: 478  LRWCLSGTPIQNS----LNDLGALLKFMQARPF-HHLGNFRYYISNPFEVRSTKHRATER 532

Query: 778  LQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSH 837
            L LL       R  +   +P   +E   + FT + A  Y +    ++R+IL        H
Sbjct: 533  LALLLEGTCLRRTIERVGLPGRREETHVVEFTADEAKQYKDTQKAIQRHILQKVGEYNEH 592

Query: 838  VESLLNPKQWKFRSTTIRNLRLSCCVAGHIK-------VTDAGED--IQETMDVLVE--- 885
              S +      F+  T   LR  C    H         + D  ED     T D LV    
Sbjct: 593  EVSGM------FQLYT--QLRRLCNHGTHQHPFSWKKMLLDEEEDPICSFTRDSLVRCLI 644

Query: 886  -NGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMD---SEKCSLPGCGFLYEMQSPEI 941
               + P     +   Y         +H+LCL+C  +    S     P C      ++   
Sbjct: 645  CTAVLPFLSPESLPAY-----AESCKHVLCLECFPVTESPSNPSIRPNCPVCRFQKATPF 699

Query: 942  LTRPENPNPKWPVPQDLIELQPSYR--QWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQ 999
             +R +  +          E    +R   +S+  T L  DL R ++ S K+     IIFS 
Sbjct: 700  SSRKDTCHRSRQSIDAENEYDGYFRPSGFSSKMTMLVSDL-RKDMNSTKS-----IIFSC 753

Query: 1000 FLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDL 1058
            +   + ++ + L  A IK+A +      S + K+LD F        L+M  G+ + GL+L
Sbjct: 754  WTRTLDLVGEHLKSAKIKYARIDGKTPLSERQKTLDNFDSTREKPVLVMTFGTGAFGLNL 813

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
              V RVF++EP W+ ++E Q I+RA R+G    + V    ++G++EE
Sbjct: 814  KSVNRVFIVEPQWNPAVENQAIARAIRLGQKEQVLVIKYLVKGSIEE 860


>gi|414887861|tpg|DAA63875.1| TPA: hypothetical protein ZEAMMB73_072475 [Zea mays]
          Length = 824

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 130/540 (24%), Positives = 238/540 (44%), Gaps = 68/540 (12%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            SR TL+V P  +   W TQ+++H++ G L ++++   +      L   YD+V+TT++ L 
Sbjct: 294  SRTTLVVCPPSVFSSWVTQLEEHLKAGSLKVYMYHGERTRDKKEL-LKYDLVLTTYSILG 352

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             E+  ++ SP+  + W RV+LDE H + +S     + +  I+L A  RW++TGTP  N+ 
Sbjct: 353  TEF-EQEDSPVKDIEWFRVILDEAHVIKNS--AARQTKAVIALNAERRWVVTGTPIQNSS 409

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT- 791
                  L P++ FL  + +   +  W   I RP E   + G SRL  LL    IS R+  
Sbjct: 410  FD----LYPLMAFLRFQPF-SIKSYWQSLIQRPLEKGSKAGLSRLQNLL--GAISLRRIK 462

Query: 792  -------DLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNP 844
                    +  +P       +++ + E    Y+++    R    M ++ D   +  L N 
Sbjct: 463  EMDDGNKSMVELPSKTVLACYIDLSAEEREYYDQMEQEGRNK--MQEFGDRDSI--LSNY 518

Query: 845  KQWKFRSTTIRNL--RLSCC--------VAGHIKVTDAGEDIQETMDVLVENG------- 887
                +    +R L   ++ C         A  I+      ++ + + +LV++G       
Sbjct: 519  STVLYFILRLRQLCDDVALCPLDMKAWFPASSIEDVSKHPELLKKLALLVDDGDDFDCPI 578

Query: 888  -LDPLSQEYAFIKYNLLNGGNCLRHILCLDCV--AMDSEKCSLPGCGFLYEMQSPEILTR 944
             L P ++                 HI C  C+   + S     P C     +   ++   
Sbjct: 579  CLSPPTKTVI----------TSCTHIYCQTCILKILKSSSSRCPIC--RRTLSKEDLFLA 626

Query: 945  PENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHI 1004
            PE  +P      +L   +P     S     LK          N+    K ++FSQF + +
Sbjct: 627  PEVKHPDEDGSGNLESDRPLS---SKVQALLKL----LTASQNEDPSSKSVVFSQFRKML 679

Query: 1005 HVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH---DASCLALLMDGSASLGLDLSFV 1061
             ++E  L  AG K   +   M +  +++ +  F H   D+  + L    +A  G++L+  
Sbjct: 680  ILLEAPLRKAGFKTLRLDGSMSAKKRLQVIQEFSHGGSDSPTVLLASLKAAGAGVNLTAA 739

Query: 1062 TRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLL 1121
            + V+L +P W+  +EEQ + R HR+G  + + V  L ++G++EE++L      +R +RL+
Sbjct: 740  STVYLFDPWWNPGVEEQAMDRVHRIGQKKEVKVIRLIVKGSIEERILAL---QERKKRLI 796



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 9/85 (10%)

Query: 166 KLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFH 225
           +LF HQ+ A+ WM+HRE +A++   P +     + GF    N ++        P ++   
Sbjct: 196 ELFGHQKEALGWMVHREESADL---PPFWQEGEDGGFE---NVLTNQKTEKRPPPLK--- 246

Query: 226 GGMFCDEPGLGKTITALSLILKTQG 250
           GG+F D+ GLGKT+T LSLI +T+ 
Sbjct: 247 GGIFADDMGLGKTLTLLSLIGRTKA 271


>gi|340521784|gb|EGR52018.1| predicted protein [Trichoderma reesei QM6a]
          Length = 882

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 251/531 (47%), Gaps = 70/531 (13%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            +TLI+ P  ++ +W+ QI++HV+   Q  + V+   K+ S H+L  +Y+VVIT++  L+ 
Sbjct: 359  STLIIAPVSVMSNWEQQIRRHVKEEHQPSILVYHGAKRGSYHNL-LEYNVVITSYGTLAK 417

Query: 674  EWGRRKKSPMMQVH-WLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            E     K+ + Q   W RV+LDEGHT+ +    T     A  L A +RW+LTGTP  N+ 
Sbjct: 418  ELVDGNKTLLGQKKPWRRVVLDEGHTIRNVK--TKAALAACELAAESRWVLTGTPIINS- 474

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSR--LLQLLHRCMISARK 790
               +  LQ +++FLH     +  + +   I R     M   RS   LLQ L + +   RK
Sbjct: 475  ---VKDLQSLVRFLHITGGIEQPEIFSNAISRKL---MSGDRSAEALLQSLMQDICLRRK 528

Query: 791  TDLQTIPLCI-KEVTFLN---FTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQ 846
             D++ + L + K+  +L+   F  E    Y+ L+   R   ++ D+   S        ++
Sbjct: 529  KDMKFVDLRLPKKTEYLHRITFHPEEKTKYDALLSEARG--VLEDYQAKSKT-----GQK 581

Query: 847  WKFRSTTIRNLRL--SCCVAGHIKVTDAGEDIQETMDVLVENGLDPL------------- 891
             +F++   R LRL  SC    H   T   E I + M +L E  + PL             
Sbjct: 582  GRFQNVLERLLRLRQSC---NHW--TLCRERINDLMQMLKEYDVVPLTEKNRALLQEALR 636

Query: 892  ----SQEYAFIKYNLLNG---GNCLRHILCLDCVAMDSE-KCSLPGCGFLYEMQSPEILT 943
                SQ+   I Y+        NC +H+ C  C+    + +   P C     ++  ++L 
Sbjct: 637  LFIDSQDDCAICYDTPTNPVITNC-QHVFCRHCITRAIQLQAKCPMC--RNPLKEDDLLE 693

Query: 944  RPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEH 1003
                     P P+   +      Q S+    + Q + R  L++  +   K++IFSQ+   
Sbjct: 694  ---------PAPEGTFDKHFDTEQQSSKTEAMLQ-IIRATLKNQGS---KIVIFSQWTSF 740

Query: 1004 IHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVT 1062
            + ++++QL  AG+ +  +   M++  + K++D   +D+    +L      S+GL+L    
Sbjct: 741  LDIVQKQLQGAGLNYCRIDGSMNAEKRDKAIDALDNDSETRIMLASLAVCSVGLNLVSAD 800

Query: 1063 RVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
             V L +  W  ++E+Q + R HR+G TR   +  L M GT+EE++L+  Q+
Sbjct: 801  TVILSDSWWAPAIEDQAVDRVHRLGQTRETKIWRLIMEGTIEERVLDVQQE 851



 Score = 43.9 bits (102), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 10/88 (11%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATE----DGFYFYVNTVSGDIATGTA 218
           +K  L P+Q   + WM  +E N ++   P+  D  T+    D    Y N  S D  T  A
Sbjct: 272 LKSTLLPYQLQGLAWMQSKE-NPQL--PPVGSDTVTQLWRRDKKGRYWNLAS-DFITAKA 327

Query: 219 PTMRDFHGGMFCDEPGLGKTITALSLIL 246
           P++  F GG+  D+ GLGKT+  +SLIL
Sbjct: 328 PSL--FSGGILADDMGLGKTLQIISLIL 353


>gi|354493703|ref|XP_003508979.1| PREDICTED: helicase-like transcription factor [Cricetulus griseus]
          Length = 1006

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 238/540 (44%), Gaps = 72/540 (13%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            +R TLI+ P  ++ +W  Q  QH++P   L+ +V+    +    +L    D+V+TT+N L
Sbjct: 472  TRTTLIICPLSVLSNWIDQFGQHIKPEVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNIL 531

Query: 672  SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
            + ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+
Sbjct: 532  THDYGTKDDSPLHSIKWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS 589

Query: 732  PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
                L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 590  ----LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGEEGGLRRLQSLIKNITLRRTKT 644

Query: 792  D------LQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRRNILMADWNDPSHVESL 841
                   +  +P     +  +  +EE    Y    NE   T+ R     +    +H   +
Sbjct: 645  SKIKGKPVLELPERKVFIQHITLSEEERKIYQSVKNEGKATIGR--YFTEGTVLAHYADV 702

Query: 842  LNPKQWKFRSTTIRNLRLSCC-----VAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYA 896
            L           +  LR  CC       G      +G D  E +  +       L ++  
Sbjct: 703  LG---------LLLRLRQICCHTHLLTNGMSSSGPSGNDTPEELRKM-------LIKKMK 746

Query: 897  FIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV-- 954
             I    L+ G+     +CLD + +      +  C  ++       + + E P+ K P+  
Sbjct: 747  LI----LSSGSDEECAICLDSLTVP----VITHCAHVFCKPCICQVIQSEQPHAKCPLCR 798

Query: 955  ----PQDLIELQP----------SYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQ 999
                  +L+E  P          S  +W++++      L    +E     P+ K ++ SQ
Sbjct: 799  NSIHGDNLLECPPEELACDGEKKSKMEWTSSSKI--NALMHALIELRTENPNIKSLVVSQ 856

Query: 1000 FLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSASLGL 1056
            F   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL   +  +GL
Sbjct: 857  FTTFLSLIETPLKDSGFVFTRLDGSMAQKKRVESIQSFQNTEAGSPTVMLLSLKAGGVGL 916

Query: 1057 DLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            +L   +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ +Q+T R
Sbjct: 917  NLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVVITKFIVKDSVEENMLK-IQNTKR 975



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + ++   P +     E     Y NT++ + +    P   +  G
Sbjct: 240 LLPHQKQALAWMISRENSKDL--PPFW-----EQRNDLYYNTIT-NFSEKERP--ENVRG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|242046730|ref|XP_002461111.1| hypothetical protein SORBIDRAFT_02g040960 [Sorghum bicolor]
 gi|241924488|gb|EER97632.1| hypothetical protein SORBIDRAFT_02g040960 [Sorghum bicolor]
          Length = 822

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 136/531 (25%), Positives = 240/531 (45%), Gaps = 50/531 (9%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            SR TL+V P  +   W TQ+++H++ G L ++++   +      L   YD+++TT++ L 
Sbjct: 293  SRTTLVVCPPSVFSSWVTQLEEHLKAGSLKVYIYHGERTRDKKEL-LKYDLILTTYSILG 351

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             E+  ++ SP+  + W RV+LDE H + +S     + +  I+L A  RW++TGTP  N  
Sbjct: 352  TEF-EQEDSPVKDIEWFRVILDEAHVIKNS--AARQTKAVIALNAERRWVVTGTPIQN-- 406

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT- 791
            NS    L P++ FL  + +   +  W   I RP E   + G SRL  LL    IS R+  
Sbjct: 407  NS--FDLYPLMAFLRFQPFSI-KSYWQNLIQRPLEKGNKTGLSRLQNLLG--AISLRRIK 461

Query: 792  DL-----QTIPLCIKEVT--FLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNP 844
            D+      T+ L  K V   +++ + E    Y+++    R    M ++ D   +  L N 
Sbjct: 462  DIDIGTKSTVDLPSKTVLACYIDLSAEEREYYDQMQQEGRNK--MQEFGDRDLI--LRNY 517

Query: 845  KQWKFRSTTIRNL--RLSCC--------VAGHIKVTDAGEDIQETMDVLVENGLDPLSQE 894
                +    +R L   ++ C         A  I+      ++ + +  LV++G D     
Sbjct: 518  STVLYFILRLRQLCDDVALCPLDMKAWFPANSIEDVSKNPELLKKLASLVDDG-DDFDCP 576

Query: 895  YAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPE-ILTRPENPNPKWP 953
                        +C  HI C  C+ M   K S   C       S E +   PE  +P   
Sbjct: 577  ICLCPPTKTIITSCT-HIYCQTCI-MKILKSSSSRCPICRRTLSKEDLFLAPEVKHPDED 634

Query: 954  VPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTV 1013
               +L   +P   +       LK          N+    K ++FSQF + + ++E  L  
Sbjct: 635  GSSNLESDRPLSSKVQALLKLLKA-------SQNEDPLSKSVVFSQFKQMLILLESPLRK 687

Query: 1014 AGIKFAGMYSPMHSSNKIKSLDMFRH---DASCLALLMDGSASLGLDLSFVTRVFLMEPI 1070
            AG K   +   M +  +++ +  F H   D+  + L    +A  G++L+  + V+L +P 
Sbjct: 688  AGFKTLRLDGSMSAKKRLQVIQEFTHGGPDSPTVLLASLKAAGAGVNLTAASTVYLFDPW 747

Query: 1071 WDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLL 1121
            W+  +EEQ + R HR+G  + + V  L ++ ++EE++L      +R +RL+
Sbjct: 748  WNPGVEEQAMDRVHRIGQKKEVKVIRLIVKDSIEERILTL---QERKKRLI 795



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 9/85 (10%)

Query: 166 KLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFH 225
           +LF HQ+ A+ WM+HRE +A++   P +     + GF    N ++        P ++   
Sbjct: 195 ELFGHQKEALGWMVHREESADL---PPFWQECEDGGFE---NVLTNQKTENRPPPLK--- 245

Query: 226 GGMFCDEPGLGKTITALSLILKTQG 250
           GG+F D+ GLGKT+T LSLI +T+ 
Sbjct: 246 GGIFADDMGLGKTLTLLSLIGRTKA 270


>gi|425774557|gb|EKV12859.1| SNF2 family helicase, putative [Penicillium digitatum Pd1]
 gi|425776416|gb|EKV14633.1| SNF2 family helicase, putative [Penicillium digitatum PHI26]
          Length = 947

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 160/578 (27%), Positives = 260/578 (44%), Gaps = 74/578 (12%)

Query: 592  FDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHK 650
              + +L LA  +PL +V    S+ TLI+ P  ++ +W+ QIQ H  +     + ++    
Sbjct: 400  IQIISLILANAKPLTAVS---SKTTLIIAPVGVMSNWRNQIQDHAHKETAPSVLIYHGSG 456

Query: 651  KPSAHSLAWDYDVVITTFNRLSAEWGRRKKSP----MMQVHWLRVMLDEGHTLGSSLNLT 706
            K  A +LA  YDVVIT++  L+ ++     +     +  +HW RV+LDEGH +    N +
Sbjct: 457  KKEAANLA-KYDVVITSYGALALDFSPNDNNAPAKGIFSLHWRRVVLDEGHNI---RNPS 512

Query: 707  NKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRP 765
            +K  +A   L A +RW LTGTP  NT    L  L   ++FL      ++ + ++G ++RP
Sbjct: 513  SKASLAACGLRADSRWTLTGTPIINT----LKDLYAQIRFLKFSGGLEDLRIFNGVLIRP 568

Query: 766  FEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTF----LNFTEEHAGTYNELVV 821
              A   E R  LL+ L   +   R+ D+  I L + E+T     + F       Y+    
Sbjct: 569  LTAGEPEAR-LLLEALMGTICLRRRKDMGFINLKLPEMTSRIIRIKFNAHEQEKYSAFQT 627

Query: 822  TVRRNILMADWNDP------SH-VESLLNPKQ----WKFRSTTIRNLRLSCCVAGHIKVT 870
              +  +L  D+ D       SH +E LL  +Q    W    T I   +L   +  H  V 
Sbjct: 628  EAQGALL--DFKDKEGKTTYSHLLEVLLRLRQVCNHWALCKTRID--KLMSMLEEHKVVP 683

Query: 871  DAGEDI---QETMDVLVENGLDPLSQEYAFIKYNLLNG---GNCLRHILCLDCVAMDSE- 923
               E+I   QE + + +E      SQE   I  + L       C+ H  C  C+    E 
Sbjct: 684  LTPENIRALQEMLQLQIE------SQELCAICLDNLEQPVITACV-HSYCRGCIEQVIER 736

Query: 924  --KCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYR 981
              KC  P C    +++  + L    +P  +     D +E  P      ++ +   + L +
Sbjct: 737  QHKC--PLC--RADIKETDTLI---SPAVELGEDIDTVEANP------DSPSSKIETLVK 783

Query: 982  PNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDA 1041
                  +A   K ++FSQ+   +++IE  L   GIKFA +   M S  +  S++ F  D 
Sbjct: 784  ILAAQGQAPGTKTVVFSQWTSFLNLIEPHLEQRGIKFARVDGKMPSVKRDNSINSFSTDP 843

Query: 1042 SCLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR 1100
             C  LL   S  S+GL+L    +V L +  W  ++E+Q + R +R+G  R   V  L M 
Sbjct: 844  GCAVLLASLSVCSVGLNLVAANQVILCDSWWAPAIEDQAVDRVYRLGQKRETTVWRLVME 903

Query: 1101 GTVEEQMLEFLQDTDRCRRLL----KEELVKPEREGAR 1134
             ++EE++L      +R R L+    +E   K E  G R
Sbjct: 904  DSIEERVLAI---QERKRSLMQAAFRETARKAEDRGTR 938



 Score = 44.7 bits (104), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 31/145 (21%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNT------VSGDIATG 216
           +  +L P+Q+  + WM+ +E        P      + D    +  T      V+ + AT 
Sbjct: 327 LSTQLLPYQRQGLAWMIKQE-------SPSLPAKGSSDIVQLWKRTCNDFLNVATNFATA 379

Query: 217 TAPTMRDFHGGMFCDEPGLGKTITALSLIL---------KTQGTLADPPDGVKIIWCTHN 267
           T PT+    GG+  D+ GLGKTI  +SLIL          ++ TL   P GV   W    
Sbjct: 380 TEPTL--ASGGILADDMGLGKTIQIISLILANAKPLTAVSSKTTLIIAPVGVMSNWRNQI 437

Query: 268 GD-------PRCGYYDLSGDKLTCN 285
            D       P    Y  SG K   N
Sbjct: 438 QDHAHKETAPSVLIYHGSGKKEAAN 462


>gi|355694760|gb|AER99777.1| helicase-like transcription factor [Mustela putorius furo]
          Length = 1056

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 132/539 (24%), Positives = 244/539 (45%), Gaps = 70/539 (12%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            SR TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L
Sbjct: 523  SRTTLIICPLSVLSNWIDQFGQHIKADVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNIL 582

Query: 672  SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
            + ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+
Sbjct: 583  THDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS 640

Query: 732  PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
                L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 641  ----LKDLWSLLSFLKLKPF-LDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 695

Query: 792  D------LQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRR----NILMADWNDPSH 837
                   +  +P     +  +  ++E    Y    NE   T+ R      ++A + D   
Sbjct: 696  SKIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLG 755

Query: 838  VESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAF 897
            +  LL  +Q    +  + N   S   +G+    +  + +   M +++ +G D   +E A 
Sbjct: 756  L--LLRLRQICCHTHLLTNAVSSSGPSGNDTPEELRKKLIRKMKLILSSGSD---EECA- 809

Query: 898  IKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV--- 954
                           +CLD + +      +  C  ++       + + E P+ K P+   
Sbjct: 810  ---------------ICLDSLTVP----VITHCAHVFCKPCICQVIQNEQPHAKCPLCRN 850

Query: 955  ---PQDLIELQP----------SYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQF 1000
                 +L+E  P          S  +W++++      L    ++  K  P+ K ++ SQF
Sbjct: 851  DIHGDNLLECPPEELACDTEKKSNMEWTSSSKI--NALMHALIDLRKKNPNIKSLVVSQF 908

Query: 1001 LEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH---DASCLALLMDGSASLGLD 1057
               + +IE  L  +G  F  +   M    +++S+  F++    +  + LL   +  +GL+
Sbjct: 909  TTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLN 968

Query: 1058 LSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ +Q+T R
Sbjct: 969  LSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNTKR 1026



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + ++   P +     E     Y NT++ + +    P   + HG
Sbjct: 290 LLPHQKQALAWMVSRENSKDL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 339

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 340 GILADDMGLGKTLTAIAVIL 359


>gi|410897939|ref|XP_003962456.1| PREDICTED: helicase-like transcription factor-like [Takifugu
            rubripes]
          Length = 943

 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 142/532 (26%), Positives = 244/532 (45%), Gaps = 70/532 (13%)

Query: 612  LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
            L RATLI+ P  ++ +W  Q +QHVR   +L ++++   ++  +       DVVITT+N 
Sbjct: 416  LPRATLIITPLSVLSNWMDQFEQHVRADVKLRVYLYYGSERNRSQRFLSSQDVVITTYNV 475

Query: 671  LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTP 729
            LSA++G   KSP+  + WLRV+LDEGH +    N   ++  A+  L A  RW+L+GTP  
Sbjct: 476  LSADFG--NKSPLHGIKWLRVVLDEGHII---RNPNAQMSKAVLQLNAQRRWILSGTPIQ 530

Query: 730  NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISAR 789
            N+    +  L  +L FL  + +   ++ W+  I RP       G    LQ L +C I+ R
Sbjct: 531  NS----VKDLWMLLAFLRLKPF-DVREWWNRVIQRPVTQGDRAGLQN-LQTLVKC-ITLR 583

Query: 790  KTDLQTI---PL--------CIKEVTF-LNFTEEHAGTYNELVVTVRRNILMADWNDPSH 837
            +T    +   PL        C+++V    +  EE+     E   T+RR +  A+     +
Sbjct: 584  RTKSSKVNGRPLVFLPEKTVCVEQVELSRSEREEYELARTEGRNTIRRYV--AEGTILRN 641

Query: 838  VESLLNPKQWKFRSTTIRNLRLSCCVAGHIK--VTDAG---------EDIQETMDVLVEN 886
               +L           +  LR  CC    +    TD G         E + E + V++ +
Sbjct: 642  YADIL---------VILMKLRQHCCHPDLLAKPSTDLGASATPAEMREHLIEKLRVVLAS 692

Query: 887  GLD-PLSQEYAFIKYNLLNGGNCLRHILCLDC----VAMDSEKCSLPGCGFLYEMQSPEI 941
            G D   S     I+  ++   +C  H+ C  C    ++ + E    P C    E+++ E+
Sbjct: 693  GSDEECSVCLESIRLPVIT--HCA-HVYCRPCITQVISTEQESARCPLC--RGEIKTNEL 747

Query: 942  LTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFL 1001
            +  P     +         +     + S+    L  +L R   E       K ++ SQF 
Sbjct: 748  VEFPPEEMEEEK------SINSGKWRTSSKVQALMGNLLRLRCEDGSI---KCLVVSQFT 798

Query: 1002 EHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR---HDASCLALLMDGSASLGLDL 1058
              + ++E+ L   G  F  +   ++   + + +  F+    D+  + LL   +  +GL+L
Sbjct: 799  RFLTILERPLREHGFSFVRLDGSINQKRRTEVIREFQSSTEDSPTIMLLSLKAGGVGLNL 858

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +  + VFLM+P W+ + EEQ I R HR+G TR + V    ++ +VEE+M+E 
Sbjct: 859  TAASHVFLMDPAWNPATEEQCIDRCHRLGQTRKVTVTKFIVKHSVEERMVEI 910


>gi|417405582|gb|JAA49500.1| Putative helicase-like transcription factor [Desmodus rotundus]
          Length = 1007

 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 239/533 (44%), Gaps = 60/533 (11%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 474  RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILT 533

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 534  HDYGMKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLYLEAERRWVLTGTPIQNS- 590

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 591  ---LKDLWSLLSFLKLKPF-LDREWWHRTIQRPVTMGDEGGLRRLQSLVKNITLRRTKTS 646

Query: 793  ------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPS---HVESLLN 843
                  +  +P     +  +  ++E    Y + V    R+ +   +N+ +   H   +L 
Sbjct: 647  KIKGKPVLELPERKVFIQHITLSDEERKIY-QTVKNEGRDTIGRYFNEGTVLAHYADVLG 705

Query: 844  PKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLL 903
                      +  LR  CC   H+        +    D   E     L ++       +L
Sbjct: 706  ---------LLLRLRQICCHT-HLLTNAVSSSVPSGNDTPEE-----LRKKLIRKMKLIL 750

Query: 904  NGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV------PQD 957
            + G+     +CLD + +      +  C  ++       + + E P+ K P+        +
Sbjct: 751  SSGSDEECAICLDSLTVP----VITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHGDN 806

Query: 958  LIELQP----------SYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQFLEHIHV 1006
            L+E  P          S  +W++++      L    ++  K  P+ K ++ SQF   + +
Sbjct: 807  LLECPPEELACDTEKKSNMEWTSSSKI--NALMHALIDLRKKNPNIKSLVVSQFTTFLSL 864

Query: 1007 IEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSASLGLDLSFVTR 1063
            IE  L  +G  F  +   M    +++S+  F++ A+    + LL   +  +GL+LS  +R
Sbjct: 865  IETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTAAGSPTIMLLSLKAGGVGLNLSAASR 924

Query: 1064 VFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            VFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ +Q+T R
Sbjct: 925  VFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNTKR 976



 Score = 49.3 bits (116), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 241 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 290

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 291 GILADDMGLGKTLTAIAVIL 310


>gi|242072472|ref|XP_002446172.1| hypothetical protein SORBIDRAFT_06g003030 [Sorghum bicolor]
 gi|241937355|gb|EES10500.1| hypothetical protein SORBIDRAFT_06g003030 [Sorghum bicolor]
          Length = 1174

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 238/561 (42%), Gaps = 75/561 (13%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
             TLIV P  L+  WK +++ H   G L +FV     K S+  L   +DVV+TT+  LSA 
Sbjct: 639  GTLIVCPQSLLGQWKDELEAHSAQGALSVFVHYGGDKTSSLMLMAQHDVVLTTYGVLSAA 698

Query: 675  WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
                  S   ++ W R++LDE HT+      T   Q A  L +  RW LTGTP  N    
Sbjct: 699  CKADYNSIFHRMDWYRIVLDEAHTI--KCPKTKSAQAAYRLNSECRWCLTGTPLQN---- 752

Query: 735  QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ 794
            +L  L  +L FL  E +  N K W   I +P+E   + G   +  +L   M+   K    
Sbjct: 753  KLEDLYSLLCFLRCEPWC-NAKWWQKLIQKPYENGDDRGLKLVRAILRPLMLRRTKETKD 811

Query: 795  TI--PLCIKEVTFLNFTE----EHAGTYNELVVTVRRNILMAD--------WNDPSHVES 840
             I  P+ +     +   E    EH   + E +   RR+ +  D         N+ ++V  
Sbjct: 812  KIGNPILVLPPAHIEVVECEQSEHERDFYEAL--FRRSKVQFDKFVAQGSVLNNYANVLE 869

Query: 841  LLNPKQWKFRSTTIRNLRL-SCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIK 899
            LL              LRL  CC    + ++ A       +D + +  L+ + Q ++  +
Sbjct: 870  LL--------------LRLRQCCDHPFLVISRADPGKYADLDQVAQQFLEGV-QSFSG-R 913

Query: 900  YNLLNGGNCLRHIL----------CLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPN 949
             N++     +  ++          C  C+   S+   L  C   + M    +L+    P+
Sbjct: 914  QNVVPSRAYVEEVVEEIRQGATTECPICLESASDDPVLTPCA--HRMCRECLLSSWRTPD 971

Query: 950  PKWPVP--------QDLIELQPSYR-------QWSNTNTFLKQDLYRPNLESNKALPDKV 994
               P P         DLI L    R        W ++    K  +   +L+  K   +K 
Sbjct: 972  -GGPCPLCRSHISKSDLIILPAQCRFQVDAKNNWKDSCKVSKLIMMLQSLQKKK---EKS 1027

Query: 995  IIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSAS 1053
            I+FSQF     ++E      GIKF      +   +K K L  F      L L+M   +  
Sbjct: 1028 IVFSQFTSFFDLLEIPFNQKGIKFLRFDGKLSQKHKEKILKEFSETQDKLVLMMSLKTGG 1087

Query: 1054 LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
            +GL+L+  + VFLM+P W+ ++EEQ I R HR+G  R + V+   ++ TVEE++ +    
Sbjct: 1088 VGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKREVRVKRFIVKDTVEERLQQVQM- 1146

Query: 1114 TDRCRRLLKEELVKPEREGAR 1134
              R +R++   L   E  GAR
Sbjct: 1147 --RKQRMVSGALTDEEIRGAR 1165


>gi|390337016|ref|XP_786706.3| PREDICTED: helicase-like transcription factor-like
            [Strongylocentrotus purpuratus]
          Length = 1304

 Score =  137 bits (345), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 144/535 (26%), Positives = 238/535 (44%), Gaps = 60/535 (11%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG---QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
            RATLI+ P  ++ +W  Q ++HV       + L+   + KK  A  L    DVVITT++ 
Sbjct: 556  RATLILCPLSVLSNWIDQFREHVADELQVNVCLYYGAEKKKLKADYLK-QQDVVITTYST 614

Query: 671  LSAEW-GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP 729
            ++AE+  +++K+ +  + W R++LDEGHT+ +   L  + Q A +L A  +W LTGTP  
Sbjct: 615  VAAEFKAKQEKATLQTIEWRRIVLDEGHTIRNHGTL--QTQAAHALKAQCKWALTGTPIQ 672

Query: 730  NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH----RCM 785
            N+    +  L  ++ FL  E +      W   I RP       G  R+ +L+     R M
Sbjct: 673  NS----IKDLWSLVAFLGVEPFKSTHTWWQRIITRPIANNDSAGIDRVRKLMDTLALRRM 728

Query: 786  ISARKTDLQTIPLCIKEVT--FLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLN 843
             S +      + L  + V   +++F+E+    Y  +    R  +     +      S+LN
Sbjct: 729  KSQKVNGKPLVDLPARNVVLQYVDFSEDEKKVYKTMEKDGRLAV-----SKYFQQGSVLN 783

Query: 844  PKQWKFRSTTIRNLRLSCC--------VAGHIKVTDAGEDIQETMDVLVENGLDPLSQ-- 893
               +      +  LR  CC         A   +  D  E   E    LV   +  LSQ  
Sbjct: 784  --HYGDILAILMRLRQLCCHPALCAKAAANLCQAIDGNERTDEEKAQLVATLVSFLSQGA 841

Query: 894  -EYAFIKYNLLNGGNCLR--HILCLDCVA--MDSEKCSLPGCGFLYEMQSPEILTRPENP 948
             E   I    +      R  H+ C  C+   +++EK     C    +  S E L      
Sbjct: 842  DEECCICLESIEDPVITRCAHVFCQRCIGEVINTEK-ERACCPLCRQAVSKESLVH---- 896

Query: 949  NPKWPVPQDL--IELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD--KVIIFSQFLEHI 1004
                 VP+D    E   + R+W ++    K D     L + +A     K I+ SQF   +
Sbjct: 897  -----VPKDRSDTENDDTDREWHSS---AKVDALMECLLTERAADKTTKSIVVSQFTSFL 948

Query: 1005 HVIEQQLTVAGIKFA---GMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFV 1061
             ++++ LT  G KF    G  S +  +  I+       D+  + LL   +  +GL+L+  
Sbjct: 949  DLLKKPLTEKGFKFCRLDGSMSRIARTAAIREFSSNDPDSPQIFLLSLKAGGVGLNLTAA 1008

Query: 1062 TRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            +R++L++P W+ + EEQ   R HR+G T+ + +    +R +VEE MLE LQ+T R
Sbjct: 1009 SRLYLLDPAWNPACEEQCFDRCHRLGQTKDVTITKFLVRDSVEEAMLE-LQETKR 1062



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFA---GMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            K I+ SQF   + ++++ LT  G KF    G  S +  +  I+       D+  + LL  
Sbjct: 1143 KSIVVSQFTSFLDLLKKPLTEKGFKFCRLDGSMSRIARTAAIREFSSNDPDSPQIFLLSL 1202

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+L+  +R++L++P W+ + EEQ   R HR+G T+ + +    +R +VEE MLE
Sbjct: 1203 KAGGVGLNLTAASRLYLLDPAWNPACEEQCFDRCHRLGQTKDVTITKFLVRDSVEEAMLE 1262

Query: 1110 FLQDTDR 1116
             LQ+T R
Sbjct: 1263 -LQETKR 1268



 Score = 54.3 bits (129), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 9/85 (10%)

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTM 221
           C+  K++PHQ+ A+ WML RE N ++   P + D  T  G Y   N+++   +     ++
Sbjct: 235 CIIRKMYPHQKQALHWMLARESNDKL---PTFWD-KTPSGLYH--NSLTNFTSAKRPDSV 288

Query: 222 RDFHGGMFCDEPGLGKTITALSLIL 246
           R   GG+  DE GLGKT+T ++L+L
Sbjct: 289 R---GGILADEMGLGKTLTVIALVL 310


>gi|302498861|ref|XP_003011427.1| SNF2 family helicase, putative [Arthroderma benhamiae CBS 112371]
 gi|291174978|gb|EFE30787.1| SNF2 family helicase, putative [Arthroderma benhamiae CBS 112371]
          Length = 1167

 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 159/635 (25%), Positives = 256/635 (40%), Gaps = 145/635 (22%)

Query: 607  SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVIT 666
            SV + L+ ATLI+VP  LVDHW  +I  H     + +   +  K P A  L   YD+V+ 
Sbjct: 383  SVTVQLTSATLIIVPPNLVDHWLNEIAIHTEGLNVLVLRDSSAKTPPASDL-LKYDIVLF 441

Query: 667  TFNRLSAEWGRRKKS------PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            +  R   E G    S      P+  + WLR+++DEGH   SS   TN + M   L    R
Sbjct: 442  SQPRFKKESGVYTGSGPTYFSPLRYLRWLRIIVDEGHNFASSGGKTNSVYMLDKLQVERR 501

Query: 721  WLLTGTPTPNTPNSQ--LSHLQPMLKFLHEEAYGQ--NQKAWDGGILRPFEAEMEEGRSR 776
            W+++GTP+      +  L+  Q +     EE  G     +   G IL      ++  RS 
Sbjct: 502  WIVSGTPSKGLYGVEITLAAEQSLNSTSEEEKIGGILEARRHAGNILNDEVKRLDSLRSM 561

Query: 777  LLQLLH---------------------------RCMISARKTDLQTI------------- 796
            ++  L+                           R M  + +  LQ++             
Sbjct: 562  VIDFLNLKPWANSRAADPASWTTYMTPIGPDGRRAMSPSLRATLQSLVVRHRSEDLHREL 621

Query: 797  --PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTI 854
              P    EV +L  T     + N  ++ +  N + ++     +   L +PK  K  S  +
Sbjct: 622  PLPSLHNEVVYLEPTCYDKASLNLFILRIVINAITSERTGDDY---LFHPKNRKHLSQLM 678

Query: 855  RNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQ---EYAFIKYNLLNG------ 905
             NLRL+            G + +E  +V +  G D L +     A  + NLL+       
Sbjct: 679  NNLRLAGFWW-------PGAETEEIQNVTLRVGKDYLQKNIDRMAGEELNLLHQAISIGE 731

Query: 906  ---GNCLRHILC------------LDC----------------------VAMDSEK---- 924
               G   R++LC             +C                      +A +++K    
Sbjct: 732  KILGFSTRNVLCEKEEVGILVDGFPECAQGFWEIGERTGHQEPMLLGLSLAREAQKFVVS 791

Query: 925  --CSL------PGCGFLYEMQSPEILTRPENPNPKWPVPQDLIEL--QPSYRQWSNTNTF 974
              CSL       G G     Q  +  T+ E  +PK   P+++I    +P   + S+T + 
Sbjct: 792  KLCSLDPGEGLAGAGIRARRQRYQKPTQVEKASPK-KKPEEVINTTHRPKPEKISDTKSS 850

Query: 975  LKQDL-YRPNLESNKAL-------------------PDKVIIFSQFLEHIHVIEQQLTVA 1014
            +K+ L    +L+  K +                    +K+IIF +       I + L + 
Sbjct: 851  VKKSLPSDSSLKKTKVIGTVSAKLSYLLEKVLQFQDTEKIIIFYESENTAFWIAEGLELV 910

Query: 1015 GIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDR 1073
            G  F      + +S K + L  F    S   LLMD   AS GL ++  +RVF++ PIWD 
Sbjct: 911  GTDFRIYAHTLKASQKSEYLSTFNEGESVRVLLMDLRQASHGLHIAIASRVFIVNPIWDP 970

Query: 1074 SMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            ++E Q I RAHR+  TRP++VETL ++ T+E++ML
Sbjct: 971  NIESQAIKRAHRISQTRPVYVETLVLKDTLEDKML 1005


>gi|406867015|gb|EKD20054.1| SNF2 family domain-containing protein [Marssonina brunnea f. sp.
            'multigermtubi' MB_m1]
          Length = 896

 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 142/567 (25%), Positives = 250/567 (44%), Gaps = 86/567 (15%)

Query: 616  TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLA-----WDYDVVITTFNR 670
            TLI+ P  ++ +W  QI++HV+  + ++ + T H   S   L       +YDVV+TT+  
Sbjct: 362  TLIIAPVSVMSNWVQQIERHVKK-ERNMKIMTYHG--SGRGLMTFGELGEYDVVVTTYGT 418

Query: 671  LSAEWGRR----------KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            LSAE+ +           +K  +  ++W R++LDEGHT+ +    T     A ++ A  R
Sbjct: 419  LSAEYYKNAKGSVPEKLPRKHGIFSMNWARIVLDEGHTIRNPN--TKSAVAATAVAAKCR 476

Query: 721  WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
            W+LTGTP  NT    +  L  MLKF+      +  + ++  + RP  A  +     +L  
Sbjct: 477  WVLTGTPIVNT----IKDLYSMLKFIGITGGLERLELFNAILTRPL-ALGDRNADLILHS 531

Query: 781  LHRCMISARKTDLQTIPLCIKEVT----FLNFTEEHAGTYNELVVTVRRNILMADWNDPS 836
            + R +   RK D++ + L + E++     + F  +    Y+ L          A+    +
Sbjct: 532  IMRTLCLRRKKDMKFVDLRLPELSEYVHRIAFRPDEREKYDAL---------RAEAQGMA 582

Query: 837  HVESLLNPKQWKFRST--TIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQE 894
                   P Q  +R     +  +R  CC   H K+   GE + + + +L  + +  L+++
Sbjct: 583  QKLQSAKPGQNAYRHVLEILLRMRQVCC---HWKL--CGERVSDLLALLENDEVVALTKK 637

Query: 895  -----YAFIKYNLLNGGNC--------------LRHILCLDCVAMD---SEKCSLPGCGF 932
                  A ++  + +   C               +H+  LDC+A      +KC  P C  
Sbjct: 638  NVAALQALLQLTIESSEECPICLENLHDPVITACKHVFGLDCIARTIQLQQKC--PMC-- 693

Query: 933  LYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD 992
              E++   +L  P+      PV    +          NT +   + L      S K    
Sbjct: 694  RAELKDASVLVYPKPAEEAIPVKDIDV----------NTKSSKTEALMSILAASRKDPQS 743

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            KV+IFSQ+   + +I  QL  AG+KFA +   M ++ + + +     D  C  LL     
Sbjct: 744  KVVIFSQWTSFLDIIRAQLVEAGMKFARIDGSMSATVRDRGMTALESDPECRILLASLAV 803

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S+GL+L     V L +  W  ++E+Q + R HR+G TRP  V  L M  ++EE++L+  
Sbjct: 804  CSVGLNLVAADTVILADSWWAPAIEDQAVDRVHRLGQTRPCTVWRLVMEESIEERVLDIQ 863

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHRT 1138
             +    +RLL  +  + + +G +   T
Sbjct: 864  AE----KRLLVGKAFQEKAKGDKQKTT 886


>gi|281347790|gb|EFB23374.1| hypothetical protein PANDA_016786 [Ailuropoda melanoleuca]
          Length = 1005

 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 131/538 (24%), Positives = 243/538 (45%), Gaps = 70/538 (13%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 472  RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILT 531

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 532  HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 588

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 589  ---LKDLWSLLSFLKLKPF-LDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTS 644

Query: 793  ------LQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRR----NILMADWNDPSHV 838
                  +  +P     +  +  ++E    Y    NE   T+ R      ++A + D   +
Sbjct: 645  KIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGL 704

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFI 898
              LL  +Q    +  + N   S   +G+    +  + +   M +++ +G D   +E A  
Sbjct: 705  --LLRLRQICCHTHLLTNAVSSSGPSGNDTPEELRKKLIRKMKLILSSGSD---EECA-- 757

Query: 899  KYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV---- 954
                          +CLD + +      +  C  ++       + + E P+ K P+    
Sbjct: 758  --------------ICLDSLTVP----VITHCAHVFCKPCICQVIQNEQPHAKCPLCRND 799

Query: 955  --PQDLIELQP----------SYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQFL 1001
                +L+E  P          S  +W++++      L    ++  K  P+ K ++ SQF 
Sbjct: 800  IHGDNLLECPPEELACDTEKKSNMEWTSSSKI--NALMHALIDLRKKNPNIKSLVVSQFT 857

Query: 1002 EHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH---DASCLALLMDGSASLGLDL 1058
              + +IE  L  +G  F  +   M    +++S+  F++    +  + LL   +  +GL+L
Sbjct: 858  TFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL 917

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            S  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ +Q+T R
Sbjct: 918  SAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNTKR 974



 Score = 48.1 bits (113), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + ++   P + +  ++     Y NT++ + +    P   + HG
Sbjct: 237 LLPHQKQALAWMVSRENSKDL---PPFWEQRSD----LYYNTIT-NFSEKDRP--ENVHG 286

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 287 GILADDMGLGKTLTAIAVIL 306


>gi|342890595|gb|EGU89386.1| hypothetical protein FOXB_00100 [Fusarium oxysporum Fo5176]
          Length = 895

 Score =  136 bits (343), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 162/630 (25%), Positives = 269/630 (42%), Gaps = 90/630 (14%)

Query: 511  LKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSYAAGETQGFHKIFQAFGL 570
            L E  +L+  +++  L W+   +  E  ++ T G   P+   +       FH I   F  
Sbjct: 293  LSEKRILLTGLSQ-GLAWM---TSKENPQLPTKGSKEPVQ-LWLHESNNRFHNIASGF-- 345

Query: 571  IRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRA---TLIVVPSYLVDH 627
                         PK L      + A  + L + L  + L L+     TLIV P  ++ +
Sbjct: 346  --------VTGTAPKLLSG---GILADDMGLGKTLQIISLILTGGKGPTLIVAPVSVMSN 394

Query: 628  WKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWD-YDVVITTFNRLSAEWG----RRKKS 681
            W  QI++HV+  Q   +FV+  H     H L    YDVVIT++ RL+ E      R   S
Sbjct: 395  WSQQIRRHVKGDQQPSIFVF--HGGDKLHPLQLQKYDVVITSYGRLARERDSSVPRAISS 452

Query: 682  PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQP 741
            P  ++ W RV+LDEGHT+ +S   T     A  + A +RW+LTGTP  N+    +  L  
Sbjct: 453  P--KIKWRRVVLDEGHTIRNSR--TKVAIAACEINAESRWVLTGTPIVNS----VKDLHS 504

Query: 742  MLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCI- 800
            ++KFLH     +  + ++  I R        G   L  L+H   +  RK D++ I L + 
Sbjct: 505  LVKFLHITGGIEESEIFNAQITRKLANGESHGEVLLQALMHDLCLRRRK-DMKFIDLKLP 563

Query: 801  --KEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLR 858
              KE T    +E  A  Y +          +  W   S      + ++ +F++   R LR
Sbjct: 564  AKKEFTKSWVSEMGADDYRDEARGE-----LEQWQAGSQ-----SGQKGRFQNVLERLLR 613

Query: 859  LSCC--VAGHIKVTDAGEDI----------QETMDVLVENGLDPLSQEYAFIKYNLLNGG 906
            L     V+  +K+ D  E +          QE + + +E      SQE   I Y+  N  
Sbjct: 614  LRQIERVSDILKLLDEHEVVPLNAKNRGLLQEALRLYIE------SQEECAICYDNPNDP 667

Query: 907  --NCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPS 964
                 +H+ C +C+                + + P    + +  +   P P+D  +    
Sbjct: 668  VITTCKHVFCRNCILR----------AIQIQHKCPMCRNKLDENSLLEPAPEDAGDDTRD 717

Query: 965  Y---RQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGM 1021
            +    Q S T   L+      N E +K     V++FSQ+   ++++E QL    I +  +
Sbjct: 718  FDADSQSSKTEAMLQILKATMNKEGSK-----VVVFSQWTAFLNIVEAQLKKENIGYTRI 772

Query: 1022 YSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVI 1080
               M +  + K++++   D     +L   S  S+GL+L     V L +  W  ++E+Q I
Sbjct: 773  DGSMKADKRDKAIEVLDSDPKTRVMLASLSVCSVGLNLVAADTVILSDSWWAPAIEDQAI 832

Query: 1081 SRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             R HR+G TR   +  L M G+VEE++L+ 
Sbjct: 833  DRVHRLGQTRETTIFRLVMEGSVEERVLDV 862


>gi|156062442|ref|XP_001597143.1| hypothetical protein SS1G_01337 [Sclerotinia sclerotiorum 1980]
 gi|154696673|gb|EDN96411.1| hypothetical protein SS1G_01337 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1130

 Score =  136 bits (343), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 139/573 (24%), Positives = 238/573 (41%), Gaps = 98/573 (17%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            + TL+V P  ++ +W+ QI+ HV+PG L  +++    +        +YDVVITT+  +++
Sbjct: 547  KTTLLVAPLSVISNWEDQIKAHVKPGALKYYIYHGANRIKDVKKLSEYDVVITTYGSVAS 606

Query: 674  EWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            E+  R K      P+ +++W R++LDE H +     L  + +    L+A  RW  TGTP 
Sbjct: 607  EFNNRNKRKDGKYPLEEMNWFRIVLDEAHMIREQSTL--QFKAICRLSAQRRWACTGTPV 664

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N    +L  L  ++ FL  + +  +   +   IL PF+    E   +L +LL   +   
Sbjct: 665  QN----RLEDLGALMNFLRVKPF--DGSGFAQHILSPFKICDPEIIPKL-RLLVDSITLR 717

Query: 789  RKTDLQTIPLCIKEVTFLNFTEEHAGTYN--ELVVTVRRNILMADWNDPSHVESLLNPKQ 846
            R  D   +P     +  LNF++E    Y+  E   T R  ++       S  ES L  K 
Sbjct: 718  RLKDKIDLPKRHDHIVRLNFSDEERMVYDIFEKNATDRLKVIT------SQGESALGGKT 771

Query: 847  WKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGL----------------DP 890
            +     +I  LR  C           G+D+  + D+ + NGL                D 
Sbjct: 772  FHHILQSILRLRQVCA---------HGKDLLSSEDLKIMNGLSKDSAIDLDSEEYEDHDG 822

Query: 891  LSQEYAFIKYNLL---NGGNCLR-----------------------------HILCLDCV 918
            ++ + A+  Y L+      +CL                              HI+C  C+
Sbjct: 823  MTSKQAYDMYKLMKETGADSCLTCNRKIGPQDVVDSDGEPKDEVIGYMTPCFHIICGLCI 882

Query: 919  AM---DSEKCSLPG----CGFLYEMQSPEILT-------RPENPNPKWPVPQDLIELQPS 964
                   E+ +  G    C   ++  SP + +       + E    K        +   S
Sbjct: 883  GAYRSQLEEMAFGGSFVTCPTCHQQISPSVFSLKQEEVDKDEESRLKSKESAKAGKDLSS 942

Query: 965  YRQWSNTNTFLKQDLYRPNLESN---KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGM 1021
            Y         L  DL     ES       P K ++FS +  H+ +I+  L    I +  +
Sbjct: 943  YSGPHTKTIALIHDLLESKKESELNPNQPPIKSVVFSGWTSHLDLIQFALQENNIPYTRL 1002

Query: 1022 YSPMHSSNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVI 1080
               M    +  +++ FR D + + +L+  SA  LGL+L+   +V++MEP ++ + E Q I
Sbjct: 1003 DGKMTRIARSNAMENFREDPTIVVILVSISAGGLGLNLTTANKVYVMEPQFNPAAEAQAI 1062

Query: 1081 SRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
             R HR+G  R +      M  + EE+ML+ +QD
Sbjct: 1063 DRVHRLGQRREVQTVRFIMNNSFEEKMLK-IQD 1094


>gi|301783337|ref|XP_002927083.1| PREDICTED: helicase-like transcription factor-like [Ailuropoda
            melanoleuca]
          Length = 1007

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 131/538 (24%), Positives = 243/538 (45%), Gaps = 70/538 (13%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 474  RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILT 533

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 534  HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 590

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 591  ---LKDLWSLLSFLKLKPF-LDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTS 646

Query: 793  ------LQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRR----NILMADWNDPSHV 838
                  +  +P     +  +  ++E    Y    NE   T+ R      ++A + D   +
Sbjct: 647  KIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGL 706

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFI 898
              LL  +Q    +  + N   S   +G+    +  + +   M +++ +G D   +E A  
Sbjct: 707  --LLRLRQICCHTHLLTNAVSSSGPSGNDTPEELRKKLIRKMKLILSSGSD---EECA-- 759

Query: 899  KYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV---- 954
                          +CLD + +      +  C  ++       + + E P+ K P+    
Sbjct: 760  --------------ICLDSLTVP----VITHCAHVFCKPCICQVIQNEQPHAKCPLCRND 801

Query: 955  --PQDLIELQP----------SYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQFL 1001
                +L+E  P          S  +W++++      L    ++  K  P+ K ++ SQF 
Sbjct: 802  IHGDNLLECPPEELACDTEKKSNMEWTSSSKI--NALMHALIDLRKKNPNIKSLVVSQFT 859

Query: 1002 EHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH---DASCLALLMDGSASLGLDL 1058
              + +IE  L  +G  F  +   M    +++S+  F++    +  + LL   +  +GL+L
Sbjct: 860  TFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL 919

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            S  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ +Q+T R
Sbjct: 920  SAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNTKR 976



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + ++   P + +  ++     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKDL---PPFWEQRSD----LYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|344288954|ref|XP_003416211.1| PREDICTED: helicase-like transcription factor [Loxodonta africana]
          Length = 1008

 Score =  136 bits (342), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 137/536 (25%), Positives = 236/536 (44%), Gaps = 66/536 (12%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TLI+ P  ++ +W  Q  QH++    L+ +V+    +     L    D+V+TT+N L+
Sbjct: 475  RTTLIICPLSVLSNWIDQFGQHIKSEVHLNFYVYYGPDRIRDPILLSKQDIVLTTYNILT 534

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 535  HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 591

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 592  ---LKDLWSLLSFLKLKPF-LDREWWHRTIQRPVTMGDEGGLRRLQSLIRNITLRRTKTS 647

Query: 793  ------LQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRR----NILMADWNDPSHV 838
                  +  +P     +  +  ++E    Y    NE   T+ R      ++A + D   V
Sbjct: 648  KIKGKPVLELPERKVFIQHIMLSDEERKMYQSVKNEGRATIGRYFNEGTVLAHYAD---V 704

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFI 898
              LL              LR  CC   H+ +T A      T D   E     L ++   +
Sbjct: 705  LGLL------------LRLRQICCHT-HL-LTSAASSSGPTGDDTPEELRKKLIRKMKLV 750

Query: 899  KYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDL 958
                L+ G+     +CLD +A       +  C  ++       + + E PN K P+ ++ 
Sbjct: 751  ----LSSGSDEECAICLDSLAAP----VITHCAHVFCKPCICQVIQNEQPNAKCPLCRNN 802

Query: 959  IELQ-----PSYRQWSNTNTFLKQD---------LYRPNLESNKALPD-KVIIFSQFLEH 1003
            I+       P     SNT      +         L    ++     P+ K ++ SQF   
Sbjct: 803  IDGNNLLECPPEELVSNTEKMTSTEWMSSSKINALMHALIDLRTKNPNIKSLVVSQFTTF 862

Query: 1004 IHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSASLGLDLSF 1060
            + +IE  L  +G  F  +   M    +++S+  F++  +    + LL   +  +GL+LS 
Sbjct: 863  LSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLSA 922

Query: 1061 VTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
             +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ +Q+T R
Sbjct: 923  ASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNTKR 977



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE N+E L  P + +  ++     Y NT++ + A    P   D HG
Sbjct: 240 LLPHQKQALAWMVSRE-NSEDL--PPFWEQRSD----LYYNTIT-NFAEKDRP--EDVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|357166959|ref|XP_003580935.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Brachypodium distachyon]
          Length = 1137

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 169/703 (24%), Positives = 279/703 (39%), Gaps = 106/703 (15%)

Query: 468  THQSCGD--PEEAWDNCQSITYLPGFHAKGTSD----GKKQNVSFFISVLKEHYLLINSM 521
            TH++ G   PE+   N Q+I+        GT++     + +  S  +S LK +       
Sbjct: 445  THRTAGQTFPEQG-ANEQAISEAALNKIIGTAETYDLKEAEPPSTLVSTLKPY------- 496

Query: 522  TKKALTWLAKLSPDELSEMETTGLASPILGSYAAGETQGFHKIFQAFGLIRRVEKGITRW 581
             K+AL W+++L    + + ET     P   +Y+  + +        F        G    
Sbjct: 497  QKEALFWMSELEKGSIDD-ETKQTVDPCFSAYSIADKRAPKVYINVFS-------GEATT 548

Query: 582  YYPKTLDNLAFDLAALRLALCEPLDSVRLYLSR--------------------ATLIVVP 621
             +P         + A  + L + + ++ L LS                      TLIV P
Sbjct: 549  RFPSLSRTTQGGILADAMGLGKTVMTIALILSNPRGEQGRDTRARTSSPSIRGGTLIVCP 608

Query: 622  SYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKS 681
              L+  WK +++ H   G L +FV+    +     L  ++ VV+TT+  L +       S
Sbjct: 609  MALLGQWKDELEAHSTQGSLSVFVYYGGDRTGDLRLMAEHTVVLTTYRVLQSAHKADGSS 668

Query: 682  PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQP 741
               ++ W R++LDE HT+ S    T   Q A  L +  RW LTGTP  N     L  L  
Sbjct: 669  VFHRIDWYRIVLDEAHTIKSP--RTKVAQAAYMLASQCRWCLTGTPLQNN----LEDLYS 722

Query: 742  MLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTI--PLC 799
            +L FLH E +  N   W   I RP+E   E G   +  +L   M+   K     +  P+ 
Sbjct: 723  LLCFLHVEPWC-NPNWWQRLIQRPYENGDERGLKIVKAILRPLMLRRTKETKDKLGNPIL 781

Query: 800  IKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRN--- 856
            +     +             VV   +++   D+ +     S +   ++  +   +RN   
Sbjct: 782  VLPPAHIE------------VVECEQSVEERDFYEALFRRSKVQFDKFVAQGNVLRNYAN 829

Query: 857  -----LRL-SCCVAGHIKVTDAGEDIQETMDVLVENGLDPL-----------SQEYAFIK 899
                 LRL  CC    + ++ A  +    +D L +  L+ +           S+ Y    
Sbjct: 830  ILELLLRLRQCCDHPFLVISKADTNKYTDLDELAQRFLEGVQSDSGRLAVVPSRAYVEEV 889

Query: 900  YNLLNGGNCLRHILCLDCVAMDS--EKCSLPGCG--FLYEMQSPEILTRPENPNP--KWP 953
               +  G      +CL+  + D     C+   C    L    +P        P P  + P
Sbjct: 890  VEEIRQGATTECPICLESASDDPVITPCAHRMCRECLLSSWSTPA-----GGPCPLCRSP 944

Query: 954  VPQD-LIELQPSYR-------QWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIH 1005
            V +D LI+L    R        W ++    K  +    LE  +   +K I+FSQF     
Sbjct: 945  VTKDQLIKLPGKCRFEVDAKNNWKDSCKVAKLIMTLEGLEKKR---EKSIVFSQFTSFFD 1001

Query: 1006 VIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRV 1064
            ++E      GIKF      +   ++ K L  F      + LLM   +  +GL+L+  + V
Sbjct: 1002 LLEFPFNQKGIKFLRFDGQLSQKHREKVLREFSESQDKMVLLMSLKAGGVGLNLTSASNV 1061

Query: 1065 FLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            FLM+P W+ ++EEQ I R HR+G  R + V    ++ TVEE+M
Sbjct: 1062 FLMDPWWNPAVEEQAIMRIHRIGQKREVQVRRFIVKDTVEERM 1104


>gi|326473936|gb|EGD97945.1| hypothetical protein TESG_05245 [Trichophyton tonsurans CBS 112818]
          Length = 1168

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 158/627 (25%), Positives = 259/627 (41%), Gaps = 129/627 (20%)

Query: 607  SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVIT 666
            SV + L+ ATLI+VP  LVDHW  +I  H     + +   +  K P A  L   YD+V+ 
Sbjct: 384  SVTVQLTSATLIIVPPNLVDHWLNEIAIHTEGLNVLVLRDSSAKTPPASDL-LKYDIVLF 442

Query: 667  TFNRLSAEWGRRKKS------PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            +  R   E G    S      P+  + WLR+++DEGH   SS   TN + M   L    R
Sbjct: 443  SQPRFKRESGLYTGSGPTYFSPLRYLRWLRIIVDEGHNFASSGGKTNSVYMLDKLEVERR 502

Query: 721  WLLTGTPTPNTPNSQ--LSHLQPMLKFLHEEAYGQNQKA--WDGGILRPFEAEMEEGRSR 776
            W+++GTP+      +  L+  Q +     EE  G   KA    G IL      ++  RS 
Sbjct: 503  WIVSGTPSKGLYGVEITLAAEQSLNSTSEEEKIGGILKARRHAGNILNDEVKRLDSLRSM 562

Query: 777  LLQLLH---------------------------RCMISARKTDLQTI------------- 796
             +  L+                           R M  + +  LQ++             
Sbjct: 563  AIDFLNLKPWANSRAADPASWTIYMTPVGPDGRRAMSPSLRATLQSLVVRHRSEDLHREL 622

Query: 797  --PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTI 854
              P    EV +L  T     + N  ++ +  N + ++     +   L +PK  K  S  +
Sbjct: 623  PLPSLHNEVVYLEPTCYDKASLNLFILRIVINAITSERTGDDY---LFHPKNRKHLSQLM 679

Query: 855  RNLRLSCC--------VAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYA-------FIK 899
             NLRL+             ++ +  A + +Q+ +D +  + L+ L Q  +       F  
Sbjct: 680  NNLRLAGFWWPGAETEEIQNVTLRVAKDYLQKNIDRIAGDELNLLHQAISIGEKILGFST 739

Query: 900  YNLL----------NG-----------GNCLRH---ILCLDCVAMDSEK------CSL-P 928
             N+L          +G           G   RH   +L    +A +++K      CSL P
Sbjct: 740  RNVLCEKEEVGILVDGFPECARGFWELGERTRHQEPMLIGLSLAREAQKFVVSKLCSLDP 799

Query: 929  GCGFL--------YEMQSPEILTRP---ENP-----NPKWPVPQDLIELQPSYRQWSNTN 972
            G G          +  Q P  + +P   + P      P  P P+ +  ++ S ++   ++
Sbjct: 800  GEGLAGAGIRARRHRYQKPAQVEKPSPKQKPEEVTNTPHRPKPEKISGIKSSAKKSLPSD 859

Query: 973  TFLKQDLYRPNLESN------KAL----PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMY 1022
            + LK+      + +       K L     +K+IIF +       I + L + G  F    
Sbjct: 860  SSLKKTKVIGTVSAKLSYLLEKVLQFQDTEKIIIFYESENTAFWIAEGLELVGTDFRIYA 919

Query: 1023 SPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVIS 1081
              + +S K + L  F    S   LLMD   AS GL ++  +RV+++ PIWD ++E Q I 
Sbjct: 920  HTLKASQKSEYLSTFNEGESVRVLLMDLRQASHGLHIASASRVYIVNPIWDPNIESQAIK 979

Query: 1082 RAHRMGATRPIHVETLAMRGTVEEQML 1108
            RAHR+  TRP++VETL ++ T+E++ML
Sbjct: 980  RAHRISQTRPVYVETLVLKDTLEDKML 1006


>gi|302422820|ref|XP_003009240.1| transcription termination factor 2 [Verticillium albo-atrum VaMs.102]
 gi|261352386|gb|EEY14814.1| transcription termination factor 2 [Verticillium albo-atrum VaMs.102]
          Length = 924

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 240/560 (42%), Gaps = 95/560 (16%)

Query: 590  LAFDLAALRLALCEPLDSVRLYLSRA----TLIVVPSYLVDHWKTQIQQHVRPGQ---LH 642
            L+  + A  + L + L  + L LS      TLIV P  ++ +W+ Q   HVR  +   +H
Sbjct: 384  LSGGILADDMGLGKTLQVISLVLSGTGSGPTLIVAPVSVMSNWQQQFDAHVRKDKAPKIH 443

Query: 643  LFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKS---PMMQVHWLRVMLDEGHTL 699
            +     H   +A     +YDVVIT++ +L+ E   +  S   P+M V W RV+LDEGHT+
Sbjct: 444  I-----HHGSAASEELSEYDVVITSYGKLAKERLEKTDSARGPLMSVDWRRVVLDEGHTI 498

Query: 700  GSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWD 759
             ++   T   + A  L A++RW+LTGTP  N     L  LQ ML FLH     +    ++
Sbjct: 499  RNA--KTQAARAACQLRAASRWVLTGTPIVNN----LQDLQSMLAFLHMTGGVEQPTIFN 552

Query: 760  GGILRPFEAEMEEGRSRLLQLLHRCMISARK----TDLQTIPLCIKEVTFLNFTEEHAGT 815
              I RP     +   + L  +++   +  RK     DL+ +PL  + V  + F  +    
Sbjct: 553  TVITRPLTWGHKRAEALLQSIMYDLCLRRRKDMAFVDLK-LPLKTEYVHRITFRRDENEK 611

Query: 816  YNELVVTV-------RRNILMADWNDPSHVESLLNPKQ----WKFRSTTIRNLRLSCCVA 864
            Y  L+          +R          S +E LL  +Q    W      I +L       
Sbjct: 612  YKVLLQEAQGVLQEYQRKARTGRVQFQSVLEKLLRLRQTCNHWTLCRARIDDLLKVLEGQ 671

Query: 865  GHIKVTDAGED-IQETMDVLVENGLDPLSQEYAFIKYNLLNG---GNCLRHILCLDCVAM 920
              + + D  +  +Q+ + + +E      +QE   + ++ L+     +C +H+ C  C+  
Sbjct: 672  DVVILNDKNKALLQQALRLFIE------TQEDCPVCFDTLSEPVITHC-KHVYCRRCITK 724

Query: 921  DSE---KCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTF--- 974
              E   KC  P C     M                   ++L+E  P   Q  + N F   
Sbjct: 725  VVELQRKC--PMCRQTLGM-------------------ENLLEPAPEEGQDDDANAFDGD 763

Query: 975  ----LKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNK 1030
                  + L +    + K    KV+IFSQ+   +++I+ Q+  AG+K+  +   M    +
Sbjct: 764  FKSSKTEALLKIVQATCKDPQSKVVIFSQWTSFLNIIQTQIEEAGLKWTRIDGSMKPDKR 823

Query: 1031 IKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATR 1090
                     DA+  AL       +GL+L     V L +  W  ++E+Q + R HR+G  R
Sbjct: 824  ---------DAAIAAL-------VGLNLVAADTVILADSWWAPAIEDQAVDRVHRLGQKR 867

Query: 1091 PIHVETLAMRGTVEEQMLEF 1110
            P  V  L M  T+EEQ+LE 
Sbjct: 868  PTTVWRLVMENTIEEQVLEI 887


>gi|405966841|gb|EKC32076.1| Helicase-like transcription factor [Crassostrea gigas]
          Length = 1293

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 137/547 (25%), Positives = 246/547 (44%), Gaps = 82/547 (14%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA---HSLAWDYDVVITTFN 669
            +RATLIV P  ++ +W  Q+++H+    +HL ++T +  PS     ++    DVV+TT++
Sbjct: 756  ARATLIVCPLSVMSNWLDQLEEHIHEN-IHLDIYT-YYGPSRIRDPAVLAKQDVVLTTYS 813

Query: 670  RLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPT 728
             LS  +  +    + +V WLR++LDEGH +    N   +   AI SL A  +W+LTGTP 
Sbjct: 814  TLS--FDAKNDQALQKVKWLRIVLDEGHAI---RNPNAQQTKAIYSLQAERKWVLTGTPI 868

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N+    +  L  ++ FL    +   Q  W   I RP E   E    R+  L+    I+ 
Sbjct: 869  QNS----IKDLWSLINFLQISPFTDRQ-WWTRAIERPLEQGNESAIKRVQHLMG--AIAM 921

Query: 789  RKTDLQTI---PLC-IKE----VTFLNFTEEHAGTYN------ELVVTVRRNILMADWND 834
            R+T  Q +   P+  + E    V  +  +EE    Y+      +++V+ ++  L+  + D
Sbjct: 922  RRTKKQMVDGKPIVELPERNVFVEHVKLSEEERSLYDAMQNEGKIIVSRQQGTLLHHYGD 981

Query: 835  PSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGL--DPLS 892
               +               +  LR  CC    + V  A   +++ M+    +G   D L 
Sbjct: 982  VLAI---------------LMRLRQMCCHP--LLVAKAAAAMKDIMNEAEASGGMNDALR 1024

Query: 893  QEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKW 952
            Q+       +L+ G+     +CLD +      C    C  ++     E + + E P  + 
Sbjct: 1025 QKLVDTLMMVLSSGSDEECAICLDSLKQPIITC----CAHVFCRGCIEAVIKNETPTARC 1080

Query: 953  PVPQDLIEL------------QPSYRQ------WSNTNTF--LKQDLYRPNLESNKALPD 992
            P+ +  + +            QPS  +      W ++     L   L +   E+ +    
Sbjct: 1081 PLCRGDVSIDSLTEVPAEQTRQPSVAEAATEGEWKSSTKVDALMNGLVKLREENPRI--- 1137

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + ++E  L   G +F  +   M    +++S++ F + A     + LL  
Sbjct: 1138 KSLVVSQFTSLLTLLEIPLKALGFRFVRLDGTMSMKQRLRSVEEFSNPAPGSPTIMLLSL 1197

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +G++L   +RVFLM+P W+ + EEQ   R HR+G T+ + +    +  +VEE+M+ 
Sbjct: 1198 KAGGVGINLVAASRVFLMDPAWNPASEEQCFDRCHRLGQTKDVIITKFVVEDSVEERMMA 1257

Query: 1110 FLQDTDR 1116
             LQD  R
Sbjct: 1258 -LQDQKR 1263



 Score = 43.9 bits (102), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           ++ HQ+ A+ WM+ RE N + L  P +     ++G YF   T+     T T P  R   G
Sbjct: 220 MYKHQKQALHWMIKRE-NGDQL-PPFW---ENKNGQYFNSVTI---FTTKTKP--RSVCG 269

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+  ++LI+
Sbjct: 270 GILADDMGLGKTLQTIALIM 289


>gi|348687950|gb|EGZ27764.1| hypothetical protein PHYSODRAFT_321501 [Phytophthora sojae]
          Length = 618

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 140/279 (50%), Gaps = 41/279 (14%)

Query: 585 KTLDNLAFDLAAL-RLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHL 643
           KT+  LA+ L    R    E L S     S A+LIVVP  LV+HWK QI+ HV  G L  
Sbjct: 331 KTITMLAYSLRPRDRSVAAEDLVS-----SGASLIVVPDPLVEHWKYQIEAHVESGALRT 385

Query: 644 FV-WTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKK---------------------- 680
           F+  T  + PS   LA   DVV+T+F+RL+ EW R +                       
Sbjct: 386 FIDETGEELPSNLELA-ACDVVVTSFSRLAREWRRHRPASALEKRMPERYGFEGIQRYSD 444

Query: 681 -------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
                  S ++ V W+RV++DEGH LG     TN + MA +++A  RW++TGTPTPNT  
Sbjct: 445 GTIRGEVSSLLTVRWVRVIVDEGHELGGQ-TPTNLMLMARTVSAERRWVMTGTPTPNTLQ 503

Query: 734 S-QLSHLQPMLKFLHEEAYGQ-NQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
           S  L+++  +L FL  + YGQ + + W   I +PFE     G  RL  LL R ++   K 
Sbjct: 504 SADLNYVHGLLLFLRNKPYGQPDARTWTKAIAKPFEHNKPIGFYRLQSLLSRILMRHTKE 563

Query: 792 DLQTI-PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILM 829
            ++ I P  +    +++ T      YN +   VR N+++
Sbjct: 564 SIREILPEPVWHTVYIDPTPSEYAQYNVVAAAVRANLVI 602



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 14/143 (9%)

Query: 112 KPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPCMKLKLFPHQ 171
           +P+ N  +  I+D+  + +  ++  +   +L  ++  C   R LA +++P + L L+ HQ
Sbjct: 206 RPKSNGSNVKITDLPKNALHLVVYFMDATELGAVSGVCSLFRHLAYAVVPGLNLVLYEHQ 265

Query: 172 QAAVEWMLHREWNAEVLRHPLYIDLATEDGFYF-----YVNTVSGD--IATGTAPTMRDF 224
           +  ++WML+RE        P  I  +T   F F       + V+ D  +      T RD 
Sbjct: 266 RKGLKWMLYRE-------TPSLIRSSTSHPFLFPRRPGRSSNVAIDMKVVKDVDTTTRDL 318

Query: 225 HGGMFCDEPGLGKTITALSLILK 247
            GGMFCDEPGLGKTIT L+  L+
Sbjct: 319 CGGMFCDEPGLGKTITMLAYSLR 341


>gi|351709348|gb|EHB12267.1| Helicase-like transcription factor [Heterocephalus glaber]
          Length = 978

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 130/538 (24%), Positives = 243/538 (45%), Gaps = 70/538 (13%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 445  RTTLIICPLSVLSNWIDQFGQHIKSEVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILT 504

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 505  HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 561

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 562  ---LKDLWSLLSFLKLKPF-LDREWWHRTIQRPVTMGDEAGLRRLQSLIKNITLRRTKTS 617

Query: 793  ------LQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRR----NILMADWNDPSHV 838
                  +  +P     +  +  ++E    Y    NE   T+ R      ++A + D   +
Sbjct: 618  KIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGKATIGRYFNEGTVLAHYADVLGL 677

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFI 898
              LL  +Q    +  + N   S   +G+    +  + + + M +++ +G D   +E A  
Sbjct: 678  --LLRLRQICCHTHLLTNAVSSSGPSGNDTPEELRKMLIKKMKLILSSGSD---EECA-- 730

Query: 899  KYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV---- 954
                          +CLD + +      +  C  ++       + + E P+ K P+    
Sbjct: 731  --------------ICLDSLTVP----VITHCAHVFCKPCICQVIQNEQPHAKCPLCRND 772

Query: 955  --PQDLIELQP----------SYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQFL 1001
                +L+E  P          S  +W++++      L    ++  K  P+ K ++ SQF 
Sbjct: 773  IHGDNLLECPPEEMTCDNEKKSNMEWTSSSKI--NALMHALIDLRKKNPNIKSLVVSQFT 830

Query: 1002 EHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSASLGLDL 1058
              + +IE  L  +G  F  +   M    +++S+  F++  +    + LL   +  +GL+L
Sbjct: 831  AFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTETGSPTIMLLSLKAGGVGLNL 890

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
               +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ +Q+T R
Sbjct: 891  CAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNTKR 947



 Score = 49.3 bits (116), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L  HQ+ A+ WM+ RE + E+   PL+ +   +     Y NT++ + +    P   + HG
Sbjct: 212 LLSHQKQALAWMISRENSKEL---PLFWEQRND----LYYNTIT-NFSEKERP--ENVHG 261

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 262 GILADDMGLGKTLTAIAVIL 281


>gi|347838084|emb|CCD52656.1| similar to SNF2 family domain-containing protein [Botryotinia
            fuckeliana]
          Length = 921

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 148/556 (26%), Positives = 239/556 (42%), Gaps = 76/556 (13%)

Query: 599  LALCEPLDSVRLYL---SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK----- 650
            + L + L  + L L   +  TLIV P  ++ +W  Q+++H++  +  L V T H      
Sbjct: 362  MGLGKTLQVISLILEGGAGTTLIVAPVSVMSNWAQQMERHIKEDK-ALKVLTYHGSQAKV 420

Query: 651  KPSAHSLAWDYDVVITTFNRLSAE-WGRRKKSP--------MMQVHWLRVMLDEGHTLGS 701
            K    S    YDVVITT+  LS+E + R  K P        +   +W R++LDEGH + +
Sbjct: 421  KGMVPSDFKKYDVVITTYGTLSSELFSRSSKLPAKVPTTSGLFSFNWRRIVLDEGHIIRN 480

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
                T     A S++A+++W+LTGTP  NT    +     ML+FL         + ++  
Sbjct: 481  PK--TKSAIAATSISATSKWVLTGTPIVNT----IKDFYSMLRFLGVGGGLNELEVFNAV 534

Query: 762  ILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVT----FLNFTEEHAGTYN 817
              RP      E    LLQ   R +   RK D++ + L + E++     + F  +    Y 
Sbjct: 535  FTRPLALRNRES-ELLLQTTMRALCLRRKKDMKFVDLKLPELSEFVHKVKFRNDELKIYE 593

Query: 818  ELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSC-----CVAGHIKVTDA 872
             LV   +    MAD           N  Q+      +  +R  C     C     +V   
Sbjct: 594  ALVEQAKG---MADQYQKQSESDKENKIQYTHILEILLRMRQVCNHWKLC---ENRVNTL 647

Query: 873  GEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNC--------------LRHILCLDCV 918
             E I++  DV+V N    L+ +   ++ N+ N   C               +H+   +C+
Sbjct: 648  MESIEKD-DVVVLNAETRLALQM-LLQLNIDNHEECSICLEELHNPVITTCKHVFGQECI 705

Query: 919  AMDSE---KCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFL 975
                E   KC  P C     + + E+L  P     K        E   +  Q S T   +
Sbjct: 706  ERTIELQQKC--PMC--RAHLGNKEVLVHPAVETAK-------DEEINTDEQSSKTEALM 754

Query: 976  KQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLD 1035
            +       +  N  L  KV+IFSQ+   ++++++QL  AGIKFA +   M +  + K ++
Sbjct: 755  QI----VKVTHNDPL-SKVVIFSQWTSFLNIVQKQLEQAGIKFARIDGSMTAPQRDKGMN 809

Query: 1036 MFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
                D  C  LL      S+GL+L     V L +  W  ++E+Q + R HR+G  R   V
Sbjct: 810  SLESDPECRILLASLAVCSVGLNLVAADTVILADSWWAPAIEDQAVYRVHRLGQKRECKV 869

Query: 1095 ETLAMRGTVEEQMLEF 1110
              L M G++EE++LE 
Sbjct: 870  WRLVMEGSIEERVLEI 885


>gi|118496046|dbj|BAF37539.1| DNA repair and recombination protein RAD5B [Neurospora crassa]
          Length = 950

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 243/530 (45%), Gaps = 75/530 (14%)

Query: 616  TLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TLIV P  ++ +WK QI++HV    Q  + ++   K+        D DVVIT++  LS +
Sbjct: 432  TLIVAPVGVMSNWKQQIRRHVHEEHQPKIVIYHGSKRKEFAKALQDQDVVITSYGTLSDD 491

Query: 675  WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
                    +++  W RV+LDEGH++ ++       Q A  L A +RW+LTGTP  N+   
Sbjct: 492  -------ALVKTRWRRVVLDEGHSIRNAK--AQVAQNACKLEAKSRWVLTGTPIINS--- 539

Query: 735  QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ 794
             +  L  +LKFL      +  + ++  + RP      +G + LL+ L + +   RK D++
Sbjct: 540  -IRDLHSLLKFLRITGGIEQSEIFNTVLTRPLANGEPKGEA-LLKSLMKDLCIRRKKDMK 597

Query: 795  TIPLCIKEVT----FLNFTEEHAGTYNELVVTVRRNILMADWNDPSH---------VESL 841
             + L + E T     + F  +    Y+ L+   +   ++ ++   S          +E L
Sbjct: 598  FVDLKLPEKTEHMSRITFWPDEQKKYDALLSEAQG--VLENYRTQSKRSQGQFQGVLERL 655

Query: 842  LNPKQ----W---KFRSTTIRNLRLSCCVAGHIKVTDAGEDI-QETMDVLVENG------ 887
            L  +Q    W   K R T +  L     V   + +TD    I Q+ + + +E+       
Sbjct: 656  LRLRQTCNHWVLCKKRITEVLELLADKDV---VDLTDENRAILQQALQLYIESQEECPIC 712

Query: 888  LDPLSQEYAFIKYNLLNGGNCLRHILCLDC---VAMDSEKCSLPGCGFLYEMQSPEILTR 944
            +DPLS              +C +H+ C  C   V    +KC  P C      ++P    +
Sbjct: 713  IDPLSNPIIT---------HC-KHVFCRGCIDKVIEVQQKC--PMC------RAPLSEDK 754

Query: 945  PENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHI 1004
               P P+    QD  EL+ S  + S T   L   L +  L+   +   K+IIFSQ+   +
Sbjct: 755  LLEPAPEHSATQDEEELE-SETKSSKTEAVLA--LVKGTLDKEGS---KIIIFSQWTSFL 808

Query: 1005 HVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTR 1063
             +I+ QL  AG  +  +   M+++ +  ++    +D +   LL   G  S+GL+L     
Sbjct: 809  TIIQHQLDEAGYTYTRIDGSMNAAQRDAAIRALDYDPNTRILLASLGVCSVGLNLVSADT 868

Query: 1064 VFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
            V L +  W  ++E+Q + R HR+G TRP  V  L M  ++EE++L+  ++
Sbjct: 869  VILADSWWAPAIEDQAVDRVHRLGQTRPTTVWRLVMDNSIEERVLDIQKE 918


>gi|345561111|gb|EGX44225.1| hypothetical protein AOL_s00210g14 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1199

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 140/559 (25%), Positives = 240/559 (42%), Gaps = 69/559 (12%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            +++TL++ P  ++ +W+ QI+ HV P  +  +V+  + + S  +    YD+VITT+   +
Sbjct: 635  AKSTLLICPLSVLVNWEDQIKAHVVPDAISYYVYHGNNRLSDLNELAKYDMVITTYALAA 694

Query: 673  AEWGRRKK---SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPT 728
            +++G+ +K     + ++HW R++LDE HT+     + +K   AI ++ AS RW +TGTP 
Sbjct: 695  SDFGKAQKDNTGVLQKIHWFRIVLDEAHTIREQNTVQSK---AICNMEASRRWAVTGTPV 751

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N    +L  L  ++KFL    +    + ++  I  P ++       +L  L+    +  
Sbjct: 752  QN----RLDDLGTLIKFLRVSPFDVRSQ-FNQYISAPLKSGDPTSMDKLRVLVDSIALRR 806

Query: 789  RKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWK 848
            RK D   +P        L F+ E    Y+      R  I M         +  LN K + 
Sbjct: 807  RK-DRIDLPTKHDRTLQLRFSREEQELYDATSRQSRYKIDMV------AKQGHLNGKAYV 859

Query: 849  FRSTTIRNLRLSCCVAGHIKVTDAGEDIQET---MDVLVENGLDPLSQEYAFIKYNLLNG 905
                TI  LR+ C     +   D    I      +D L +     + ++ AF  YNL+  
Sbjct: 860  HVLQTILRLRMICASRDLLGDEDTAGLISSNAIDIDSLTDEETHAMGKKQAFEIYNLMKE 919

Query: 906  GNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSP--EILTRPE----NPNPKW------- 952
             +     +C  C    S   +  G     +   P   I T P        PK+       
Sbjct: 920  SD---EDICYTCQKKVSTATARDGTPTNQDASVPFGHITTCPHLFCTECGPKYLEALLEY 976

Query: 953  --------------PVPQDLIELQ----PSYRQWSNT-------NTFLKQDLYRPNLESN 987
                          P+   + EL+    PS ++  N        N+  K      +L  N
Sbjct: 977  ANMGDWTNCPLCRLPLRIGMRELKASDDPSLQKDENIKRKVVFRNSSTKIRHLVNDLMDN 1036

Query: 988  KALPD-----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS 1042
            + + D     K +IFS +  H+ +IE     AGIK+  +   M+ + +  SL  FR D  
Sbjct: 1037 RNMGDDKGRIKSVIFSGWTMHLDLIEFAFERAGIKWTRIDGKMNRAQRADSLTRFREDPD 1096

Query: 1043 CLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRG 1101
              A+L+  SA  +GL+L+  +RV++MEP ++ + E Q I R HR+G  R +      M  
Sbjct: 1097 VEAILVSISAGGVGLNLTAASRVYVMEPQFNPAAEAQAIDRVHRLGQEREVWCTRYIMED 1156

Query: 1102 TVEEQMLEFLQDTDRCRRL 1120
            + EE+++   Q   R   L
Sbjct: 1157 SFEEKIVALQQKKQRIADL 1175



 Score = 43.5 bits (101), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 28/102 (27%)

Query: 161 PCMKLKLFPHQQAAVEWMLHRE-------------WNAEVLRHPLYIDLATEDGFYFYVN 207
           P +   + PHQ+  + +ML +E             WN ++          +  G   Y N
Sbjct: 522 PRITTAMLPHQKQGLNFMLKKEGETTYEQGDGTSFWNVKM----------SPGGMRMYQN 571

Query: 208 TVSGD-IATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKT 248
            ++G  + +   P +    GG+  D+ GLGKT+T LSLI+ T
Sbjct: 572 VITGQQMRSKPTPCL----GGILADDMGLGKTLTVLSLIIST 609


>gi|164423632|ref|XP_962645.2| hypothetical protein NCU07975 [Neurospora crassa OR74A]
 gi|157070175|gb|EAA33409.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 898

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 243/530 (45%), Gaps = 75/530 (14%)

Query: 616  TLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TLIV P  ++ +WK QI++HV    Q  + ++   K+        D DVVIT++  LS +
Sbjct: 380  TLIVAPVGVMSNWKQQIRRHVHEEHQPKIVIYHGSKRKEFAKALQDQDVVITSYGTLSDD 439

Query: 675  WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
                    +++  W RV+LDEGH++ ++       Q A  L A +RW+LTGTP  N+   
Sbjct: 440  -------ALVKTRWRRVVLDEGHSIRNAK--AQVAQNACKLEAKSRWVLTGTPIINS--- 487

Query: 735  QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ 794
             +  L  +LKFL      +  + ++  + RP      +G + LL+ L + +   RK D++
Sbjct: 488  -IRDLHSLLKFLRITGGIEQSEIFNTVLTRPLANGEPKGEA-LLKSLMKDLCIRRKKDMK 545

Query: 795  TIPLCIKEVT----FLNFTEEHAGTYNELVVTVRRNILMADWNDPSH---------VESL 841
             + L + E T     + F  +    Y+ L+   +   ++ ++   S          +E L
Sbjct: 546  FVDLKLPEKTEHMSRITFWPDEQKKYDALLSEAQG--VLENYRTQSKRSQGQFQGVLERL 603

Query: 842  LNPKQ----W---KFRSTTIRNLRLSCCVAGHIKVTDAGEDI-QETMDVLVENG------ 887
            L  +Q    W   K R T +  L     V   + +TD    I Q+ + + +E+       
Sbjct: 604  LRLRQTCNHWVLCKKRITEVLELLADKDV---VDLTDENRAILQQALQLYIESQEECPIC 660

Query: 888  LDPLSQEYAFIKYNLLNGGNCLRHILCLDC---VAMDSEKCSLPGCGFLYEMQSPEILTR 944
            +DPLS              +C +H+ C  C   V    +KC  P C      ++P    +
Sbjct: 661  IDPLSNPIIT---------HC-KHVFCRGCIDKVIEVQQKC--PMC------RAPLSEDK 702

Query: 945  PENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHI 1004
               P P+    QD  EL+ S  + S T   L   L +  L+   +   K+IIFSQ+   +
Sbjct: 703  LLEPAPEHSATQDEEELE-SETKSSKTEAVLA--LVKGTLDKEGS---KIIIFSQWTSFL 756

Query: 1005 HVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTR 1063
             +I+ QL  AG  +  +   M+++ +  ++    +D +   LL   G  S+GL+L     
Sbjct: 757  TIIQHQLDEAGYTYTRIDGSMNAAQRDAAIRALDYDPNTRILLASLGVCSVGLNLVSADT 816

Query: 1064 VFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
            V L +  W  ++E+Q + R HR+G TRP  V  L M  ++EE++L+  ++
Sbjct: 817  VILADSWWAPAIEDQAVDRVHRLGQTRPTTVWRLVMDNSIEERVLDIQKE 866


>gi|336471312|gb|EGO59473.1| hypothetical protein NEUTE1DRAFT_79619 [Neurospora tetrasperma FGSC
            2508]
 gi|350292403|gb|EGZ73598.1| hypothetical protein NEUTE2DRAFT_86972 [Neurospora tetrasperma FGSC
            2509]
          Length = 898

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 244/530 (46%), Gaps = 75/530 (14%)

Query: 616  TLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TLIV P  ++ +WK QI++HV    Q  + ++   K+        D +VVIT++  LS +
Sbjct: 380  TLIVAPVGVMSNWKQQIRRHVHEEHQPKIVIYHGSKRKEFAKTLQDQNVVITSYGTLSDD 439

Query: 675  WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
                    +++  W RV+LDEGH++ ++       Q A  L A +RW+L+GTP  NT   
Sbjct: 440  -------ALVKTRWRRVVLDEGHSIRNAK--AQVAQNACKLEAKSRWVLSGTPIINT--- 487

Query: 735  QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ 794
             +  L  +LKFL      +  + ++  + RP      +G + LL+ L + +   RK D++
Sbjct: 488  -IRDLHSLLKFLRITGGIEQSEIFNTVLTRPLANGEPKGEA-LLKSLMKDLCIRRKKDMK 545

Query: 795  TIPLCIKE----VTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSH---------VESL 841
             + L + E    ++ + F  +    Y+ L+   +   ++ ++   S          +E L
Sbjct: 546  FVDLKLPEKTEHISRITFWPDEQKKYDALLSEAQG--VLENYRTQSKRSQGQFQGVLERL 603

Query: 842  LNPKQ----W---KFRSTTIRNLRLSCCVAGHIKVTDAGEDI-QETMDVLVENG------ 887
            L  +Q    W   K R T +  L     V   + +TD    I Q+ + + +E+       
Sbjct: 604  LRLRQTCNHWVLCKKRITEVLELLADKDV---VDLTDENRAILQQALQLYIESQEECPIC 660

Query: 888  LDPLSQEYAFIKYNLLNGGNCLRHILCLDC---VAMDSEKCSLPGCGFLYEMQSPEILTR 944
            +DPLS              +C +H+ C  C   V    +KC  P C      ++P    +
Sbjct: 661  IDPLSNPIIT---------HC-KHVFCRGCIDKVIEVQQKC--PMC------RAPLSEDK 702

Query: 945  PENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHI 1004
               P P+    QD  EL+ S  + S T   L   L +  L+   +   K+IIFSQ+   +
Sbjct: 703  LLEPAPEHSATQDEEELE-SETKSSKTEAVLA--LVKGTLDKEGS---KIIIFSQWTSFL 756

Query: 1005 HVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTR 1063
             +I+ QL  AG  +  +   M+++ +  ++    +D +   LL   G  S+GL+L     
Sbjct: 757  TIIQHQLDEAGYTYTRIDGSMNAAQRDAAIRALDYDPNTRILLASLGVCSVGLNLVSADT 816

Query: 1064 VFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
            V L +  W  ++E+Q + R HR+G TRP  V  L M  ++EE++L+  ++
Sbjct: 817  VILADSWWAPAIEDQAVDRVHRLGQTRPTTVWRLVMDNSIEERVLDIQKE 866


>gi|326479941|gb|EGE03951.1| hypothetical protein TEQG_02985 [Trichophyton equinum CBS 127.97]
          Length = 561

 Score =  133 bits (335), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 240/555 (43%), Gaps = 59/555 (10%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ATLI+ P  ++ +W+ QI+ H+ +   L +  +    K  A +L+  YDVVITT+  L
Sbjct: 24   SKATLIISPLGVMSNWRDQIEAHIHKEHALRVLTYHGSGKKEAANLS-QYDVVITTYGAL 82

Query: 672  SAEWGR---------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            ++E+G+         + K  +  V W RV+LDEGHT+ +    T     A  L A +RW 
Sbjct: 83   ASEYGQLLSATGKLAKTKRGLFSVRWRRVVLDEGHTIRTP--KTKAACAACMLEADSRWS 140

Query: 723  LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
            LTGTP  N     L  L    KF+      ++   +   ++RP  A  +E  S LLQ L 
Sbjct: 141  LTGTPIVNN----LKDLYSQGKFIRLSGGLEDLPVFHSALIRPLNAG-DENASLLLQALM 195

Query: 783  RCMISARKTDLQTIPLCI----KEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDP--- 835
              +   R+ D+  + L +      +  + F       Y       +   +    N+    
Sbjct: 196  TTICLRRRKDMSFVNLRLPPMESHILHVKFLPHEKEKYEMFEAEAKGVFMDFQSNNKGKK 255

Query: 836  ---SHV-ESLLNPKQ----WKFRSTTIRNLRLSCCVAGHIKVT-DAGEDIQETMDVLVEN 886
               SHV E LL  +Q    WK     ++ L         +K+T +  + +Q  + + +E 
Sbjct: 256  TTYSHVLEVLLRLRQVCNHWKLCHDRVKGLMELLEKDKVVKLTPENVKALQAVLQLRIE- 314

Query: 887  GLDPLSQEYAFIKYNLLNGGNCL--RHILCLDCVAMDSE---KCSLPGCGFLYEMQSPEI 941
                 SQE   I    L+        H     C+    E   KC  P C         EI
Sbjct: 315  -----SQEECSICLESLDNPVITPCAHAFDYSCIEQTIELQHKC--PLC-------RAEI 360

Query: 942  LTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFL 1001
                E  +P   + +D  ++       S+T +   Q L +      +A   K ++FSQ+ 
Sbjct: 361  KDCSELVSPAADLGEDCNQVDVE----SDTLSSKIQALIKILTAKGQAAGTKTVVFSQWT 416

Query: 1002 EHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSF 1060
              + +IE  L +  I FA +   M+S+ +  ++  F  D+ C  +L      S+GL+L  
Sbjct: 417  SFLDLIEPHLVIHNINFARIDGKMNSAKRDAAMGKFSRDSECTVMLASLNVCSVGLNLVA 476

Query: 1061 VTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRL 1120
              +V L +  W  ++E+Q + R +R+G TRP  +  L M  ++E+++L+  ++       
Sbjct: 477  ANQVVLADSWWAPAIEDQAVDRVYRLGQTRPTTIWRLVMENSIEDRVLDIQKEKRELMST 536

Query: 1121 LKEELVKPEREGARS 1135
              +E   P+ +  RS
Sbjct: 537  AFQEKAGPKDQARRS 551


>gi|121712768|ref|XP_001273995.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1]
 gi|119402148|gb|EAW12569.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1]
          Length = 953

 Score =  133 bits (334), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 230/542 (42%), Gaps = 76/542 (14%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ TLI+ P  ++ +WK QI+ H  +     + ++    K  A  L   YDVVIT++  L
Sbjct: 421  SKTTLIIAPVGVMSNWKNQIKDHTHKENTPSVLIYHGPGKKEAEKLD-QYDVVITSYGAL 479

Query: 672  SAEWGRRKKSP----MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            + E+    K+     +  VHW RV+LDEGHT+ +          A SL A +RW LTGTP
Sbjct: 480  AVEYKPNTKATPKRGLFAVHWRRVVLDEGHTIRNP--RAKGALAACSLRADSRWTLTGTP 537

Query: 728  TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
              N+    L  L   ++FL      ++   ++  ++RP   E  +GR  LLQ L   +  
Sbjct: 538  IVNS----LKDLYSQIRFLRLSGGLEDMAVFNSVLIRPLTYEDPKGR-LLLQALMSTICL 592

Query: 788  ARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILM------ADWNDPSH 837
             R+ D++ +    P     V  + F       Y+    T  + +LM            SH
Sbjct: 593  RRRKDMEFVNLRLPALTSRVLRIKFHPHEQEKYDMFQYTEAKGMLMDFKSREKGGTSYSH 652

Query: 838  V-ESLLNPKQ----WKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLS 892
            V E LL  +Q    W       R   L+  +  H  V    E+I+   D+L    L   S
Sbjct: 653  VLEVLLRMRQVCNHWAL--CKHRVDALTGLLEKHKVVPLTPENIKALQDML---QLRIES 707

Query: 893  QEYAFIKYNLLN-----------GGNCLRHIL-----CLDCVAMDSEKCSLPG-CGFLYE 935
            QE   I  + L              +C+  ++     C  C A      +L      L E
Sbjct: 708  QEMCPICLDTLEHPVITARGHSYDRDCIEQVIERQHKCPLCRADIKNTATLVAPAAALGE 767

Query: 936  MQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVI 995
                +I+  P NP+ K    + LI++  +  Q                     AL  K +
Sbjct: 768  SADDDIVADPNNPSSKI---EALIKILTAQGQ---------------------ALGTKTV 803

Query: 996  IFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SL 1054
            +FSQ+   ++++E  L    I F  +   M S+ +  S   F +D  C  LL   S  S+
Sbjct: 804  VFSQWTSFLNLVEPHLQRHRISFVRIDGSMSSTARDSSTYKFSNDPGCKVLLASLSVCSV 863

Query: 1055 GLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDT 1114
            GL+L    +  L +  W  ++E+Q + R +R+G  R   V  L M  T+E+++LE +QDT
Sbjct: 864  GLNLVAANQAILADSWWAPTIEDQAVDRVYRLGQKRETTVWRLVMENTIEDRVLE-IQDT 922

Query: 1115 DR 1116
             R
Sbjct: 923  KR 924


>gi|156049585|ref|XP_001590759.1| hypothetical protein SS1G_08499 [Sclerotinia sclerotiorum 1980]
 gi|154692898|gb|EDN92636.1| hypothetical protein SS1G_08499 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 915

 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 244/561 (43%), Gaps = 76/561 (13%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK-----KPSAHSLAWDYDVVITT 667
            S  TLIV P  ++ +W  Q+++H++  +  L V T H      K    +    YDVVITT
Sbjct: 373  SGTTLIVAPVSVMSNWAQQMERHIKEDK-ALKVLTYHGSHGKVKGMTPNEFGQYDVVITT 431

Query: 668  FNRLSAE-WGRRKKSP--------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
            +  LS+E + R  K+P        +  ++W R++LDEGH + +    T     A S+TA+
Sbjct: 432  YGILSSELFPRGSKTPGKVPTSSGLYSMNWRRIVLDEGHIIRNPK--TKSAIAATSITAT 489

Query: 719  NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL 778
            +RW+LTGTP  NT    +     MLKFL      Q    ++    RP      +    LL
Sbjct: 490  SRWVLTGTPIVNT----IKDFYSMLKFLGVSGGLQELDIFNSVFTRPLALGSRDAEV-LL 544

Query: 779  QLLHRCMISARKTDLQTIPLCIKEVT----FLNFTEEHAGTYNELVVTVRRNILMADWND 834
            Q   R M   RK D++ + L + +++     + F ++    Y  LV   +    MA    
Sbjct: 545  QTTMRAMCLRRKKDMKFVDLKLPDLSEFVHKVKFRDDELKVYEALVKQAQG---MAQQYQ 601

Query: 835  PSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIK-----VTDAGEDIQETMDVLVENGLD 889
                    N   +      +  +R  C    H K     VT   E I++  DV++ N  +
Sbjct: 602  KESESRKKNTISYTHILEILLRMRQVC---NHWKLCENRVTSLMEAIEKD-DVVILNEEN 657

Query: 890  PLSQEYAFIKYNLLNGGNCL--------------RHILCLDCVAMD---SEKCSLPGCGF 932
             L+ +   ++ N+ N   C               +H+   +C+        KC  P C  
Sbjct: 658  RLALQM-LLQLNIDNHEECAICLEELHDPVITVCKHVFGKECIERTIDLQHKC--PMC-- 712

Query: 933  LYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD 992
              ++ + E L RP        V +   E   +  + S T   ++       +  N  L  
Sbjct: 713  RADLANNECLVRP-------AVEKAEAEEINTDEKSSKTEALMQI----IKVTHNDPL-S 760

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            KV+IFSQ+   +++I++QL  +GIKFA +   M +  + K +     D  C  LL     
Sbjct: 761  KVVIFSQWTSFLNIIQKQLEQSGIKFARIDGSMTAPQRDKGMQSLESDPECRVLLASLAV 820

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S+GL+L     V L +  W  ++E+Q + R +R+G  R   V  L M G++EE++LE  
Sbjct: 821  CSVGLNLVSADTVILADSWWAPAIEDQAVDRVYRLGQKRDCKVWRLVMEGSIEERVLEIQ 880

Query: 1112 QDTDRCRRLLKEELVKPEREG 1132
             +    R+L  +   +  REG
Sbjct: 881  GEK---RKLAGKAFQEKAREG 898


>gi|157823928|ref|NP_001099948.1| helicase-like transcription factor [Rattus norvegicus]
 gi|149048534|gb|EDM01075.1| SWI/SNF related, matrix associated, actin dependent regulator of
            chromatin, subfamily a, member 3 (predicted) [Rattus
            norvegicus]
          Length = 974

 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 234/541 (43%), Gaps = 85/541 (15%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            +R TLI+ P  ++ +W  QI QH++    L+L+V+    +    +     D+++TT+N L
Sbjct: 440  TRTTLIICPLSVLSNWIDQIGQHIKSEVDLNLYVYYGPDRIRDSTWLSKQDIILTTYNIL 499

Query: 672  SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
            + ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+
Sbjct: 500  THDYGTKDNSPLHSIKWLRVILDEGHAIRNP--NAQQTKAVLELEAERRWVLTGTPIQNS 557

Query: 732  PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL-----LHRCMI 786
                L  L  +L FL  + +  +++ W   I RP     E G  RL  L     L R   
Sbjct: 558  ----LKDLWSLLSFLKLKPF-TDREWWHRIIQRPVTTGDEGGLRRLQSLIKSITLRRTKT 612

Query: 787  SA-----------RKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDP 835
            S            RK  +Q I L ++E         +    NE   T+ R     +    
Sbjct: 613  SKIKGKPVLELPERKVFIQHITLSVEERKI------YQSVKNEGKATIAR--YFTEGTVL 664

Query: 836  SHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEY 895
            +H   +L           +  LR  CC   H+ +   G     + D    +  + L +  
Sbjct: 665  AHYADVLG---------LLLRLRQICC---HVHLPTNG---TSSSDPSRSDTPEELRKML 709

Query: 896  AFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV- 954
                  +L+ G+     +CLD +        +  C  ++       + + E P+ K P+ 
Sbjct: 710  VTKMKLILSSGSDEECSICLDSLTFP----VITHCAHVFCKPCICQVIQREQPHAKCPLC 765

Query: 955  -----PQDLIELQP----------SYRQWSNT-------NTFLKQDLYRPNLESNKALPD 992
                   +L+E  P          S  +W+++       N  ++     PN++S      
Sbjct: 766  RSNIHGHNLLECPPEELACDSDNKSDMEWTSSSKINALMNALIELRTKDPNIKS------ 819

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH-DAS--CLALLMD 1049
              ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++ DA    + LL  
Sbjct: 820  --LVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTDAGSPTIMLLSL 877

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+L   +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 878  KAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 937

Query: 1110 F 1110
             
Sbjct: 938  I 938



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P + +L  +     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMIARENSKEL---PPFWELRND----LYYNTIT-NFSVKERP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|326468579|gb|EGD92588.1| SNF2 family helicase [Trichophyton tonsurans CBS 112818]
          Length = 921

 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 142/556 (25%), Positives = 239/556 (42%), Gaps = 59/556 (10%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ATLI+ P  ++ +W+ QI+ H+ +   L +  +    K  A +L+  YDVVITT+  L
Sbjct: 384  SKATLIISPLGVMSNWRDQIEAHIHKEHALRVLTYHGSGKKEAANLS-QYDVVITTYGAL 442

Query: 672  SAEWGR---------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            ++E+G+         + K  +  V W RV+LDEGHT+ +    T     A  L A +RW 
Sbjct: 443  ASEYGQLLSATGKLAKTKRGLFSVRWRRVVLDEGHTIRTPK--TKAACAACMLEADSRWS 500

Query: 723  LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
            LTGTP  N     L  L    KF+      +N   +   ++RP  A  +E  S LLQ L 
Sbjct: 501  LTGTPIVNN----LKDLYSQGKFIRLSGGLENLPVFHSALIRPLNAG-DENASLLLQALM 555

Query: 783  RCMISARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDP--- 835
              +   R+ D+  +    P     +  + F       Y       +   +    N+    
Sbjct: 556  TTICLRRRKDMSFVNLRLPPMESHILHVKFLPHEKEKYEMFEAEAKGVFMDFQSNNKGKK 615

Query: 836  ---SHV-ESLLNPKQ----WKFRSTTIRNLRLSCCVAGHIKVT-DAGEDIQETMDVLVEN 886
               SHV E LL  +Q    WK     ++ L         +K+T +  + +Q  + + +E 
Sbjct: 616  TTYSHVLEVLLRLRQVCNHWKLCHDRVKGLMELLEKDKVVKLTPENVKALQAVLQLRIE- 674

Query: 887  GLDPLSQEYAFIKYNLLNGGNCL--RHILCLDCVAMDSE---KCSLPGCGFLYEMQSPEI 941
                 SQE   I    L+        H     C+    E   KC  P C         EI
Sbjct: 675  -----SQEECSICLESLDNPVITPCAHAFDYSCIEQTIELQHKC--PLC-------RAEI 720

Query: 942  LTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFL 1001
                E  +P   + +D  ++       S+T +   Q L +      +A   K ++FSQ+ 
Sbjct: 721  KDCSELVSPAADLGEDCNQVDVE----SDTLSSKIQALIKILTAKGQAAGTKTVVFSQWT 776

Query: 1002 EHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSF 1060
              + +IE  L +  I FA +   M+S+ +  ++  F  D+ C  +L      S+GL+L  
Sbjct: 777  SFLDLIEPHLVIHNINFARIDGKMNSAKRDAAMGKFSRDSECTVMLASLNVCSVGLNLVA 836

Query: 1061 VTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRL 1120
              +V L +  W  ++E+Q + R +R+G TRP  +  L M  ++E+++L+  ++       
Sbjct: 837  ANQVVLADSWWAPAIEDQAVDRVYRLGQTRPTTIWRLVMENSIEDRVLDIQKEKRELMST 896

Query: 1121 LKEELVKPEREGARSH 1136
              +E   P+ +  RS 
Sbjct: 897  AFQEKAGPKDQARRSR 912



 Score = 47.0 bits (110), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 26/119 (21%)

Query: 161 PCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYF-------YVNTVSGDI 213
           P +  +L P+Q+  + WML RE        P   +  T+D           Y+N ++ + 
Sbjct: 291 PQLSTELLPYQRQGLAWMLDRE-------SPSLPNEGTDDIVQLWKRVGKRYMN-IATNY 342

Query: 214 ATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL---------KTQGTLADPPDGVKIIW 263
           ++ TAP +    GG+  D+ GLGKTI  +SLIL          ++ TL   P GV   W
Sbjct: 343 SSSTAPPL--ASGGILADDMGLGKTIQVISLILANSTPKTPKSSKATLIISPLGVMSNW 399


>gi|297286676|ref|XP_002803057.1| PREDICTED: helicase-like transcription factor-like [Macaca mulatta]
          Length = 932

 Score =  132 bits (333), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 129/538 (23%), Positives = 241/538 (44%), Gaps = 70/538 (13%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 399  RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 458

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 459  HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 515

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 516  ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTS 571

Query: 793  ------LQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRR----NILMADWNDPSHV 838
                  +  +P     +  +  ++E    Y    NE   T+ R      ++A + D   +
Sbjct: 572  KIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGL 631

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFI 898
              LL  +Q    +  + N   S   +G+    +  + +   M +++ +G D   +E A  
Sbjct: 632  --LLRLRQICCHTYLLTNAVSSSGPSGNDTPEELRKKLIRKMKLILSSGSD---EECA-- 684

Query: 899  KYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV---- 954
                          +CLD + +      +  C  ++       + + E P+ K P+    
Sbjct: 685  --------------ICLDSLTVP----VITHCAHVFCKPCICQVIQNEQPHAKCPLCRND 726

Query: 955  --PQDLIELQP----------SYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQFL 1001
                +L+E  P          S  +W++++      L     +  K  P+ K ++ SQF 
Sbjct: 727  IHEDNLLECPPEELACDSEKKSDMEWTSSSKI--NALMHALTDLRKKNPNIKSLVVSQFT 784

Query: 1002 EHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSASLGLDL 1058
              + +IE  L  +G  F  +   M    +++S+  F++  +    + LL   +  +GL+L
Sbjct: 785  TFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL 844

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            S  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ +Q+  R
Sbjct: 845  SAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNKKR 901



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 163 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 212

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 213 GILADDMGLGKTLTAIAVIL 232


>gi|238494326|ref|XP_002378399.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357]
 gi|220695049|gb|EED51392.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357]
          Length = 942

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 138/544 (25%), Positives = 243/544 (44%), Gaps = 64/544 (11%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVR---PGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
            S+ TLIV P  ++ +WK QIQ H       Q+H++  T  K+ +       YDVV+T++ 
Sbjct: 392  SKTTLIVAPVGVMSNWKNQIQDHTHSESAPQVHVYHGTGKKEAANLD---QYDVVVTSYG 448

Query: 670  RLSAEWGRRKKSP----MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLT 724
             L+ E+    K P    +  VHW RV+LDEGHT+    N  +K  +A  +L A +RW LT
Sbjct: 449  ALALEYNPNAKVPPKKGIFSVHWRRVVLDEGHTI---RNPRSKGALAACNLRADSRWTLT 505

Query: 725  GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRC 784
            GTP  N+    L  L   ++FL      ++   +   ++RP  +E    R  LLQ L   
Sbjct: 506  GTPIVNS----LKDLYSQVRFLKLSGGLEDMTVFTSVLIRPLMSEDPNAR-LLLQALMST 560

Query: 785  MISARKTDLQTIPLCIKEVT-------FLNFTEEHAGTYNELVVTVRRNILMADWNDPSH 837
            +   R+ D++ + L +  +T       F    +E    +  ++   R ++  A   + S 
Sbjct: 561  ICLRRRKDMEFVNLRLPPLTSRVLRIKFHTHEQEKYDMFQYVLPDSRMSVAFAHNYNRSE 620

Query: 838  VESLLNPKQWKFRSTT--------IRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLD 889
               +L   + K +S+T        I  LR  C      K     + I++   +L +N + 
Sbjct: 621  ARGMLLDFKSKDKSSTTYSHLLEVILRLRQVCNHWALCK-----DRIEKLAQLLEDNKVV 675

Query: 890  PLSQE-----YAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTR 944
            PL+ E        ++  + +   C    +CLD +    E+  +  C   +     E +  
Sbjct: 676  PLTPENIKALQDMLRIQIESQETC---PICLDTL----EQPVITACAHTFCKGCIEQVIE 728

Query: 945  PENPNP--KWPVPQDLIELQPSYRQWSNTNTFLKQ-DLYRPNLES--------NKALPDK 993
             ++  P  +  +      ++P+     +T   +   D     +E+         +A   K
Sbjct: 729  RQHKCPMCRAEITDTSTLVEPAVEMGESTEAVVADPDTPSSKIEALIKILTAQGQAPGTK 788

Query: 994  VIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA- 1052
             ++FSQ+   ++++E  L   G+ FA +   M S  +  S   F HD +C  LL   S  
Sbjct: 789  TVVFSQWTSFLNLLEPHLNRYGVGFARVDGKMSSLARDNSTYRFSHDPNCKVLLASLSVC 848

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
            S+GL+L    +  L +  W  ++E+Q + R +R+G TR   V  L M  ++E+++L  +Q
Sbjct: 849  SVGLNLVAANQAILADSWWAPAIEDQAVDRVYRLGQTRETTVWRLVMEDSIEDRVLA-IQ 907

Query: 1113 DTDR 1116
            +T R
Sbjct: 908  ETKR 911



 Score = 45.4 bits (106), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 31/146 (21%)

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFY------VNTVSGDIAT 215
            +  +L P+Q+  + WM+ +E       +P      +ED    +         ++ + +T
Sbjct: 300 ALSTELLPYQRQGLAWMIEKE-------NPTLPAAGSEDVVQLWKRKDNRFTNIATNFST 352

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLIL-----KTQG----TLADPPDGVKIIWCTH 266
             AP +    GG+  D+ GLGKTI  +SLIL     KT G    TL   P GV   W   
Sbjct: 353 SIAPPL--ASGGILADDMGLGKTIQIISLILANSAPKTPGSSKTTLIVAPVGVMSNWKNQ 410

Query: 267 NGD-------PRCGYYDLSGDKLTCN 285
             D       P+   Y  +G K   N
Sbjct: 411 IQDHTHSESAPQVHVYHGTGKKEAAN 436


>gi|355746981|gb|EHH51595.1| hypothetical protein EGM_11004 [Macaca fascicularis]
 gi|380786381|gb|AFE65066.1| helicase-like transcription factor [Macaca mulatta]
 gi|380786385|gb|AFE65068.1| helicase-like transcription factor [Macaca mulatta]
 gi|383408517|gb|AFH27472.1| helicase-like transcription factor [Macaca mulatta]
 gi|384939346|gb|AFI33278.1| helicase-like transcription factor [Macaca mulatta]
 gi|384939348|gb|AFI33279.1| helicase-like transcription factor [Macaca mulatta]
 gi|384939350|gb|AFI33280.1| helicase-like transcription factor [Macaca mulatta]
          Length = 1009

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 129/538 (23%), Positives = 241/538 (44%), Gaps = 70/538 (13%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476  RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536  HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 593  ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTS 648

Query: 793  ------LQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRR----NILMADWNDPSHV 838
                  +  +P     +  +  ++E    Y    NE   T+ R      ++A + D   +
Sbjct: 649  KIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGL 708

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFI 898
              LL  +Q    +  + N   S   +G+    +  + +   M +++ +G D   +E A  
Sbjct: 709  --LLRLRQICCHTYLLTNAVSSSGPSGNDTPEELRKKLIRKMKLILSSGSD---EECA-- 761

Query: 899  KYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV---- 954
                          +CLD + +      +  C  ++       + + E P+ K P+    
Sbjct: 762  --------------ICLDSLTVP----VITHCAHVFCKPCICQVIQNEQPHAKCPLCRND 803

Query: 955  --PQDLIELQP----------SYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQFL 1001
                +L+E  P          S  +W++++      L     +  K  P+ K ++ SQF 
Sbjct: 804  IHEDNLLECPPEELACDSEKKSDMEWTSSSKI--NALMHALTDLRKKNPNIKSLVVSQFT 861

Query: 1002 EHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSASLGLDL 1058
              + +IE  L  +G  F  +   M    +++S+  F++  +    + LL   +  +GL+L
Sbjct: 862  TFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL 921

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            S  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ +Q+  R
Sbjct: 922  SAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNKKR 978



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|125805885|ref|XP_693071.2| PREDICTED: helicase-like transcription factor-like [Danio rerio]
          Length = 942

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 240/524 (45%), Gaps = 54/524 (10%)

Query: 612  LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
            ++RATLIV P  ++ +W  Q +QH+R    + ++++   ++  + SL  + DVV+TT+N 
Sbjct: 414  VARATLIVCPLSVLSNWLDQFEQHIRTDVTVKVYLYYGSERNRSVSLLSEQDVVLTTYNV 473

Query: 671  LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
            LS+++G +  SP+  V WLRV+LDEGH + +   L +K    + L +  RW+L+GTP  N
Sbjct: 474  LSSDFGNKASSPLHNVKWLRVVLDEGHVVRNPNALQSK--AVLELQSERRWILSGTPIQN 531

Query: 731  TPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK 790
            +    L  L  +L FL  + +   ++ W   I RP       G   L  L+    I+ R+
Sbjct: 532  S----LKDLFMLLSFLKLKPF-DVKEWWSRIIQRPVTMGDRVGLKNLQALVKG--ITLRR 584

Query: 791  TD--------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
            T         L  +P     V ++  +      Y E V    +NI+   + + + + +  
Sbjct: 585  TKNSKVGGRTLVQLPERRVFVQYVTLSGMEREKY-ERVKGEGKNIVGRYFQEGTFMAN-- 641

Query: 843  NPKQWKFRSTTIRNLRLSCC---VAGHIKVTDAGEDIQETMDVLVEN---GLDPLSQEYA 896
                +    T +  LR  CC   + G+    D      E  + L++     L+  S E  
Sbjct: 642  ----YADVLTILMRLRQCCCHPSLVGNYTAADVPGTPSELRERLIQKITLVLNSGSDEEC 697

Query: 897  FIKYNLLNGG--NCLRHILCLDCVA----MDSEKCSLPGCGFLYEMQSPEILTRPENPNP 950
             I  + L         H+ C  C+      + E+   P C    ++++ E++   E P  
Sbjct: 698  AICLDSLRQPVITYCAHVFCRPCICEVIRSEKEQAKCPLC--RAQIKTKELV---EYPGE 752

Query: 951  KWPVPQDLIE-LQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQ 1009
            +     D  E  + S +  +  +  LK     P ++S        ++ SQF   + V+E 
Sbjct: 753  QAETRSDTGENWRSSSKALALMSNLLKLRNEDPTVKS--------MVVSQFTGFLDVLEV 804

Query: 1010 QLTVAGIKFAGMYSPMHSSNKIKSLDMFRHD---ASCLALLMDGSASLGLDLSFVTRVFL 1066
             L   G  F  +   +    + K+++ F+     +  + LL   +  +GL+L+  ++VF+
Sbjct: 805  ALREYGFSFTRLDGSLIQRARAKAIEDFQDSTPGSPTIMLLSLKAGGVGLNLTAASQVFV 864

Query: 1067 MEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            M+P W+ + E+Q + R HR+G +R + +    ++ +VEE M++ 
Sbjct: 865  MDPAWNPAAEDQCVDRCHRLGQSRDVVITKFIVKDSVEENMVKI 908


>gi|67523601|ref|XP_659860.1| hypothetical protein AN2256.2 [Aspergillus nidulans FGSC A4]
 gi|40744673|gb|EAA63829.1| hypothetical protein AN2256.2 [Aspergillus nidulans FGSC A4]
 gi|259487649|tpe|CBF86480.1| TPA: SNF2 family helicase, putative (AFU_orthologue; AFUA_5G06590)
            [Aspergillus nidulans FGSC A4]
          Length = 972

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 232/532 (43%), Gaps = 73/532 (13%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ATLI+ P  ++ +W+ QIQ+H  P Q   + ++    +    +L   YDVV+T++  L
Sbjct: 441  SKATLIISPVGIMSNWRNQIQEHTNPEQAPRVLIYHGPGRKEDANLD-HYDVVVTSYGTL 499

Query: 672  SAEWGRRKKSP----MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            + E+    K+     +  V W RV+LDEGHT+ +    +     A +L A +RW LTGTP
Sbjct: 500  ATEYKTESKATPQKGLFSVKWRRVVLDEGHTIRNP--RSKGFSAACALRADSRWALTGTP 557

Query: 728  TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
              NT    L  L   ++FL      ++   ++  ++RP  ++  + R  LLQ L   +  
Sbjct: 558  IVNT----LKDLYSQIRFLGLTGGLEDFAVFNSVLIRPLMSDDPDSR-LLLQALMSTICL 612

Query: 788  ARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDP-----SH- 837
             R+ D+  +    P     V  + F       Y+      +  +L    N+      SH 
Sbjct: 613  RRRKDMGFVNLRLPTLTSRVLRIKFHPHEKEKYDMFQSEAKGMLLDFKSNNKTGTTYSHL 672

Query: 838  VESLLNPKQ----WKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQ 893
            +E +L  +Q    W      +   +L+  +  H  V    ++I+   D+L    +   SQ
Sbjct: 673  LEVILRLRQVCNHWALAKNRLD--KLAAILDKHQTVPLTPDNIKALQDML---QIRIESQ 727

Query: 894  EYAFIKYNLLN-----------GGNCLRHIL-----CLDCVAMDSEKCSLPGCGFLYEMQ 937
            E   I  ++L              +C+  ++     C  C A    K SL          
Sbjct: 728  EICPICLDILETPVITACAHAFDHDCIEQVIVRQHKCPICRAEIENKSSLVAPAADLGEN 787

Query: 938  SPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIF 997
            + ++   P+NP+ K    + LI++  ++ Q   T                     K +IF
Sbjct: 788  TDDVSADPDNPSSKI---EALIKILTAHGQVEAT---------------------KTVIF 823

Query: 998  SQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGL 1056
            SQ+   + ++E  L  AGI+FA +   M S  + +S+  F  D  C  LL   S  S+GL
Sbjct: 824  SQWTSFLTLVEPHLQNAGIQFARIDGKMTSIARDRSMRRFSTDPKCTVLLASLSVCSVGL 883

Query: 1057 DLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            +L    +  L +  W  ++E+Q + R +R+G TR   V  L M  ++E+++L
Sbjct: 884  NLVAANQAILADSWWAPAIEDQAVDRVYRLGQTRETTVWRLVMEDSIEDRVL 935



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 13/106 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L P+Q+  + WM+ +E           + L  ++G  F    ++ + +T   P++    G
Sbjct: 355 LLPYQRQGLAWMISKENPGLPTSDNDVVQLWKKEGNKF--TNIATNFSTTAPPSLAS--G 410

Query: 227 GMFCDEPGLGKTITALSLIL---------KTQGTLADPPDGVKIIW 263
           G+  D+ GLGKTI  +SLIL          ++ TL   P G+   W
Sbjct: 411 GILADDMGLGKTIQIISLILSNSQPKTKESSKATLIISPVGIMSNW 456


>gi|367045880|ref|XP_003653320.1| hypothetical protein THITE_2115624 [Thielavia terrestris NRRL 8126]
 gi|347000582|gb|AEO66984.1| hypothetical protein THITE_2115624 [Thielavia terrestris NRRL 8126]
          Length = 1101

 Score =  130 bits (328), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 150/654 (22%), Positives = 248/654 (37%), Gaps = 120/654 (18%)

Query: 548  PILGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYY-------------PKTLDNL---- 590
            P LG   A +  G  K      L+ +      RW               P TL       
Sbjct: 449  PTLGGILA-DMMGLGKTLSVLSLVTKTLDDAERWSRRAPVQPKAPERKPPHTLHQFEVPK 507

Query: 591  --AFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD 648
              A DL  +RL             ++ATL++ P   V +W+ QI+QH++PG L   ++  
Sbjct: 508  PAALDLTPVRLN------------AKATLLICPLSTVTNWEEQIKQHIKPGALSYHIYHG 555

Query: 649  HKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSL 703
              +    +    YD+VITT+  + +E   R K      P+ ++ W R++LDE H +    
Sbjct: 556  PNRIKDVAQLAQYDLVITTYGSVVSELNMRLKKKRGTYPLEEIAWFRIVLDEAHQIREQS 615

Query: 704  NLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGIL 763
             L    +    L A+ RW +TGTP  N      + L  +     +E     +  +   I+
Sbjct: 616  TLG--FKAVCRLQANRRWAVTGTPVQNKLEDLAALLAFLRLKPFDE-----RPKFLQYII 668

Query: 764  RPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTV 823
            +PF+    E   +L  L+    +  R  D   +P    EV  LNFT E    Y+    T 
Sbjct: 669  QPFKVADPEIVPKLRVLIDTITLR-RLKDKIHLPPRTDEVVKLNFTPEERQVYDWFAKTA 727

Query: 824  RRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQE-TMDV 882
            +  + +         + ++  +       +I  LRL C     +   +   D+Q  T D 
Sbjct: 728  QDRVRVLTGQGAGQ-DRIMGGRTMIHILRSILQLRLICAHGKDLLNDEDLADLQGMTADT 786

Query: 883  LV-----ENGLDPLSQEYAFIKYNLL------NGGNCLR--------------------- 910
             +     + G  P+ QE     Y +L      N  NC R                     
Sbjct: 787  PIDLDSDDEGARPVLQEKK--AYEMLYLMQEGNSDNCFRCNCKLGAIEVDDPDSDSQDDL 844

Query: 911  --------HILCLDCVA-MDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIEL 961
                    H  C  CV  + +E+     C    +    E+  +            D+   
Sbjct: 845  LGYMAQCLHTYCPSCVKFLQNEQIGCDVCAHTDKSSCIELRRKRA----------DMEHE 894

Query: 962  QPSYRQWSNTNTFLKQDLYRPNLESNKAL------------------PDKVIIFSQFLEH 1003
              + +    T   +  D Y       +AL                  P K ++FS +  H
Sbjct: 895  SRAAKNKGGTGKIIPDDRYSGPHTKTRALIEELLANKEKSAMCPNEPPFKSVVFSGWTSH 954

Query: 1004 IHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVT 1062
            + +I+  L  AGI +  +   M  + +  ++D FR D S   +L+   +  LGL+L+   
Sbjct: 955  LDLIQIALDNAGITYTRLDGKMSRTARNAAMDAFRDDPSVQVILVSIMAGGLGLNLTAGN 1014

Query: 1063 RVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
             V++MEP ++ + E Q + R HR+G TR +      MR + EE+ML+ LQD  +
Sbjct: 1015 SVYVMEPQFNPAAEAQAVDRVHRLGQTRAVRTVRFVMRDSFEEKMLQ-LQDKKK 1067


>gi|452825441|gb|EME32438.1| SNF2 domain-containing protein [Galdieria sulphuraria]
          Length = 939

 Score =  130 bits (328), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 149/584 (25%), Positives = 246/584 (42%), Gaps = 83/584 (14%)

Query: 585  KTLDNLAFDLAALRLALCEPLDSVRLYLS-RATLIVVPSYLVDHWKTQIQQHVRPGQLHL 643
            KT+++LA       +A   P+D  R       TLIVVP  L++ W  ++  H+      +
Sbjct: 342  KTVESLAL------IAESSPIDEERRRQGINGTLIVVPLSLLNQWLEELYTHMEENTFEI 395

Query: 644  FVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKK--SPMMQVHWLRVMLDEGHTLGS 701
              +    K         YD+V+TT+  L AE+  +K+  SP+    W RV+LDE H +  
Sbjct: 396  LTFYGSTKSQFQCNIVKYDIVLTTYGTLCAEFREKKRFTSPLYTCEWYRVILDEAHIIKD 455

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
                T K     +L +  RWLLTGTP  N+ +   S +     FL    Y +  K W   
Sbjct: 456  RNTQTAK--ACFALNSERRWLLTGTPIQNSLDDFFSFVH----FLKVYPYAE-YKFWVRH 508

Query: 762  ILRPFEAE---MEEGRSR--LLQLLHRCMISARKTD-------LQTIPLCIKEVTFLNFT 809
            IL+P   +   +E  R+   +  L+H  ++   K         + ++P    E+  L   
Sbjct: 509  ILKPHSYKPNSLERKRAEYAIHSLIHSFLLRRTKRTPGEDGMPIVSLPERRVEIMRLEPF 568

Query: 810  EEHAGTYNELV--------VTVRRNILMADWNDPSHVESLLNPKQ------WKFRSTTIR 855
            EE    Y  L         + V  N L+A++   + +E +L  +Q          S+T+R
Sbjct: 569  EEERNIYLSLYAHSKSTFEMLVSENRLLANF--ATVLELVLRLRQCCDHPDLVLNSSTVR 626

Query: 856  NLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEY----------AFIKYNLLNG 905
             + LS          D   D  + +    +N     S EY           F K + L  
Sbjct: 627  LVDLSSA--------DKFADTIQRIFFHSDNANSSQSSEYLSTVVERLKETFSKGDNLEC 678

Query: 906  GNCLR------------HILCLDCV-AMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKW 952
              CL             H+ C +CV AM   + ++P       +    I+  P   +   
Sbjct: 679  PICLDMVDDGVMFCSCGHVTCKECVLAMLQRRNTIPCPLCRVPVTKNVIIPLPMKNSSST 738

Query: 953  PVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD--KVIIFSQFLEHIHVIEQQ 1010
             V QDL   Q S +  +        +  R  L   + L    K ++FSQ+   + ++E  
Sbjct: 739  DVHQDLCAWQRSSKLVALVKELKAIERCRIGLGYYEGLTTVGKTVVFSQWTRCLDIVEAA 798

Query: 1011 LTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS----CLALLMDG--SASLGLDLSFVTRV 1064
            L   G+ +  +   + S  + K L  FR + S    C  +L+    +  +GL+L+  ++V
Sbjct: 799  LRDNGLLYMRLDGKLSSQERSKVLASFRSEPSDAIKCANILLVSLKAGGVGLNLTAASQV 858

Query: 1065 FLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            FL++P W+ ++EEQ I R HR+G TR + V+ L +  T+EE +L
Sbjct: 859  FLIDPWWNPAVEEQAIDRVHRIGQTRTVIVKRLIIAQTIEENLL 902



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 166 KLFPHQQAAVEWMLHREWN--AEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRD 223
           +L P+Q+ AV+WM++RE +   +    P++  + T +GF F++N     ++     +   
Sbjct: 269 QLRPYQEFAVKWMMNRESSDSQQAFSDPMWEQVETGEGFSFFMNRTLSRVSLTKPTSDSI 328

Query: 224 FHGGMFCDEPGLGKTITALSLILKT 248
             GG+  DE GLGKT+ +L+LI ++
Sbjct: 329 VRGGILADEMGLGKTVESLALIAES 353


>gi|212529810|ref|XP_002145062.1| helicase, putative [Talaromyces marneffei ATCC 18224]
 gi|210074460|gb|EEA28547.1| helicase, putative [Talaromyces marneffei ATCC 18224]
          Length = 987

 Score =  130 bits (328), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 236/541 (43%), Gaps = 91/541 (16%)

Query: 614  RATLIVVPSY-LVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            RATL++VPS+ L++ W  ++++H+  G L +F +    +    S    YD+VITT+N L+
Sbjct: 447  RATLVIVPSHVLINMWTREVEEHL-DGSLRVFKYHGKDRKKHLSEIEHYDIVITTYNTLA 505

Query: 673  AEWGRRK----KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
             E G +     +SP+ +V W RV+LDE H +      T        L+A +RW L+GTP 
Sbjct: 506  REHGIKNNGGSQSPLHEVEWYRVVLDEAHMI--RRQATTFHHAVRDLSAKSRWCLSGTPI 563

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILR-----PFEAEMEEGRS-RLLQLLH 782
             N+    L  L  +L F+  + +         GI R     PFEA     R+   L LL 
Sbjct: 564  QNS----LIDLGALLVFIQAKPFHHL------GIFRYWISNPFEARSTRHRAIERLALLL 613

Query: 783  RCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL--MADWNDPSHVES 840
              +   R  +   +P   +E   + FT      Y +    ++R I+  + ++N+      
Sbjct: 614  EGICLRRTIERVALPGRREETHVVEFTPAERKHYKDTNRAMQRFIIQKVGEYNE------ 667

Query: 841  LLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKY 900
                 Q  F    I     S C  G  +          T  +L +   DP+    +  + 
Sbjct: 668  -----QKTFGMFQIFLQLRSLCNHGTYQ-----RPFSWTKKILFDEEADPVC---SITRD 714

Query: 901  NLLNGGNC------------------LRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEIL 942
            +L     C                   +H+LC +C    +E  S PG             
Sbjct: 715  SLARCVGCREPLPLISSESRPAYAENCKHVLCQECSPA-TEDSSDPGI------------ 761

Query: 943  TRPENP--NPKWPVPQDLIE-LQPSYRQWSNT----NTFLKQDLYRPNL-----ESNKAL 990
             RP  P    +  +P  L     P  R+ ++T    + +L+ + Y   +     +  KAL
Sbjct: 762  -RPNCPICKSRRVMPFSLSRNNHPQSRESTDTENDDDGYLRSNGYSSKMTMLVSDVQKAL 820

Query: 991  -PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM- 1048
               K IIFS +   + +I + L+ A I++A +      S + K LD F    +   L+M 
Sbjct: 821  NTTKSIIFSCWTRTLDLIGKHLSSANIEYARIDGKTPLSQRQKILDSFDRTRNIPILIMT 880

Query: 1049 DGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             G+ +LGL+L  V RVF++EP W+ ++E Q I+RA R+G T  + V    ++G++EE M 
Sbjct: 881  TGTGALGLNLKSVNRVFIIEPQWNPAVESQAIARAIRLGQTEQVLVIRYHVKGSIEENMC 940

Query: 1109 E 1109
            E
Sbjct: 941  E 941


>gi|302658392|ref|XP_003020900.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517]
 gi|291184770|gb|EFE40282.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517]
          Length = 1167

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 151/630 (23%), Positives = 254/630 (40%), Gaps = 135/630 (21%)

Query: 607  SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVIT 666
            SV + L+ +TLI+VP  LVDHW  +I  H     + +   +  K P A  L+  YD+V+ 
Sbjct: 383  SVTVQLTSSTLIIVPPNLVDHWLNEIAIHTEGLNVLVLRDSSAKTPPASDLS-KYDIVLF 441

Query: 667  TFNRLSAEWGRRKKS------PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            +  R   E G    S      P+  + WLR+++DEGH   SS   TN + M   L    R
Sbjct: 442  SQPRFKKESGVYTGSGPVYFSPLRYLRWLRIIVDEGHNFASSGGKTNSVYMLDKLQVERR 501

Query: 721  WLLTGTPTPNTPNSQ--LSHLQPMLKFLHEEAYGQ--NQKAWDGGILRPFEAEMEEGRSR 776
            W+++GTP+      +  L+  Q +     EE  G     +   G IL      ++  RS 
Sbjct: 502  WIVSGTPSKGLYGVEVTLAAEQSLNSTSEEEKIGGILEARRHAGNILNDEVKRLDSLRSM 561

Query: 777  LLQLLH---------------------------RCMISARKTDLQT-------------- 795
            ++  L+                           R M  + +  LQ+              
Sbjct: 562  VIDFLNLKPWANSRAADPASWTTYMTPTGPDGRRAMSPSLRATLQSLVVRHRSEDLHREL 621

Query: 796  -IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTI 854
             +P    EV +L  T     + N  ++ +  N + ++     +   L +PK  K  S  +
Sbjct: 622  PLPSLHNEVVYLEPTCYDKASLNLFILRIVINAITSERTGDDY---LFHPKNRKHLSQLM 678

Query: 855  RNLRLSCC--------VAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGG 906
             NLRL+             ++ +  A + +Q+ +D +    L+ L Q  +  +  L   G
Sbjct: 679  NNLRLAGFWWPGVETEEIQNVTLRVAKDYLQKNIDRMAGEELNLLHQAISIGEKIL---G 735

Query: 907  NCLRHILCLD----------------------------------CVAMDSEK------CS 926
               R++LC                                     +A +++K      CS
Sbjct: 736  FSTRNVLCEKEEVGILVDGFPEYAQGFWEIGERVGHQEPMLLGLSLAREAQKFVVSKLCS 795

Query: 927  L-PGCGFL--------------YEMQSPEILTRPEN--PNPKWPVPQDLIELQPSYRQWS 969
            L PG G                 +++ P    +PE     P  P P+ +   + S ++  
Sbjct: 796  LDPGEGLAGAGIKARRQRYQKPAQVEKPSPKKKPEEVINTPHRPKPEKISAPKSSAKKSL 855

Query: 970  NTNTFLKQDLYRPNLESNKA-LPDKVIIFSQFLEHIHVIEQQ---------LTVAGIKFA 1019
             +++ LK+      + +  + L +KV+ F    + I   E +         L + G  F 
Sbjct: 856  PSDSSLKKTKVIGTVSAKLSYLLEKVLQFQDTEKIIIFYESENTAFWIAEGLELVGTDFR 915

Query: 1020 GMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQ 1078
                 + +S K + L  F    S   LLMD   AS GL ++  +RVF++ PIWD ++E Q
Sbjct: 916  IYAHTLKASQKSEYLSTFNEGESVRVLLMDLRQASHGLHIAIASRVFIVNPIWDPNIESQ 975

Query: 1079 VISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             I RAHR+  TRP++VETL ++ T+E++ML
Sbjct: 976  AIKRAHRISQTRPVYVETLVLKDTLEDKML 1005


>gi|302894367|ref|XP_003046064.1| hypothetical protein NECHADRAFT_91099 [Nectria haematococca mpVI
            77-13-4]
 gi|256726991|gb|EEU40351.1| hypothetical protein NECHADRAFT_91099 [Nectria haematococca mpVI
            77-13-4]
          Length = 884

 Score =  130 bits (327), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 149/568 (26%), Positives = 245/568 (43%), Gaps = 92/568 (16%)

Query: 616  TLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TLIV P  ++ +W  QI++HV+   Q  + V+   +K S   LA  YDVVIT++ RL+ E
Sbjct: 354  TLIVAPVSVMSNWAQQIKRHVKEEHQPQVLVYHGGEKKSVEDLA-KYDVVITSYGRLARE 412

Query: 675  WGRRKKSPMMQVH--WLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
              +     +   H  W RV+LDEGHT+ ++   T   Q A  + A          +PN P
Sbjct: 413  RDQGVYRALTSEHFKWRRVVLDEGHTIRNAR--TKVAQAACEINAD---------SPNNP 461

Query: 733  NSQL---------SHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
               L           L  +LKFLH     +  + ++  I R   +    G + LLQ L  
Sbjct: 462  QISLLTLGGINSVKDLHSILKFLHITGGIEQSEIFNAKITRQLGSGSGSGEA-LLQALMH 520

Query: 784  CMISARKTDLQTIPLCIKE----VTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVE 839
             +   RK D++ + L + E    +  + F ++    Y+ L+   R  +L A W   S   
Sbjct: 521  GLCLRRKKDMKFVDLKLPEKKEYIHRIAFRKDEKRKYDALLDEAR-GVLEA-WQARSS-- 576

Query: 840  SLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPL-------- 891
               + +Q +F++   R LRL   V  H   T   E + + +++L E+ + PL        
Sbjct: 577  ---SGQQGRFQNVLERLLRLRQ-VCNHW--TLCKERVADILNLLDEHEVVPLNDKNRALL 630

Query: 892  ---------SQEYAFIKYNLLNGG--NCLRHILCLDCVAMDSE---KCSLPGCGFLYEMQ 937
                     SQE   I Y+          +H+ C  C+    +   KC  P C    ++ 
Sbjct: 631  QDALRLFIESQEDCAICYDTPTDPLITACKHVFCRACIVRAIQLQHKC--PMC--RNQLT 686

Query: 938  SPEILTRPENPNPKWPVPQDLIELQPSY---RQWSNTNT---FLKQDLYRPNLESNKALP 991
               +L          P P+D  +   S+    Q S T      LK  + +P         
Sbjct: 687  EDSLLE---------PAPEDAGDDASSFDAETQSSKTEAMLQILKATVRKPG-------- 729

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
             KV++FSQ+   +++IE QL   GI F  +   M +  +  +++   +D     +L    
Sbjct: 730  SKVVVFSQWTSFLNIIEVQLKAEGIGFTRIDGSMKTDKRDSAIEALDNDPDTRVMLASLA 789

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              S+GL+L     V L +  W  ++E+Q I R HR+G TR   V  L M G+VEE++L  
Sbjct: 790  VCSVGLNLVAADTVILSDSWWAPAIEDQAIDRVHRLGQTRETTVFRLVMEGSVEERVLNI 849

Query: 1111 LQDTDRCRRLLKEELVKPEREGARSHRT 1138
             ++    R L+ +   + +  G ++  T
Sbjct: 850  QKEK---RELVTKAFREKDARGKKAKET 874



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 19/145 (13%)

Query: 132 SILTRLGPIDLVRIAATCRHLRCLAASIMPC-MKLKLFPHQQAAVEWMLHREWNAEVLRH 190
           +I  R G   + ++A     L  L  +  P  +K +L P+Q   + WM  +E        
Sbjct: 234 AIELRNGADAIKKLAIGEDQLEKLPKADQPAQLKSQLLPYQLQGLAWMASKE-------K 286

Query: 191 PLYIDLATEDGFYFYVNTVSG-------DIATGTAPTMRDFHGGMFCDEPGLGKTITALS 243
           P + +  +ED    +     G       D  T T P +    GG+  D+ GLGKTI  +S
Sbjct: 287 PQFPEKDSEDVVQLWRRDARGRCWNIASDFVTSTTPQL--LSGGILADDMGLGKTIQIIS 344

Query: 244 LILKTQG--TLADPPDGVKIIWCTH 266
           LIL   G  TL   P  V   W   
Sbjct: 345 LILTGGGGPTLIVAPVSVMSNWAQQ 369


>gi|171688350|ref|XP_001909115.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944137|emb|CAP70247.1| unnamed protein product [Podospora anserina S mat+]
          Length = 961

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 148/539 (27%), Positives = 245/539 (45%), Gaps = 73/539 (13%)

Query: 616  TLIVVPSYLVDHWKTQIQQHV--RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            TLI  P  ++ +W+ QIQ+HV  +     L      ++ +A +L  +Y VVIT++  L++
Sbjct: 417  TLIAAPVSVISNWEQQIQRHVHEKDAPKVLIHHGTTRQTTAKALK-EYGVVITSYGTLAS 475

Query: 674  EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
            E     K P+ Q+ W R++LDEGHT+ ++   T     A  L A +RW+LTGTP  N   
Sbjct: 476  EAS--GKGPLSQIEWRRIVLDEGHTIRNAK--TKAALAACQLKAQSRWVLTGTPIINN-- 529

Query: 734  SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH----RCMISAR 789
              +  L  +L+FL      +  + ++  I RP   +     S L  L++    R +   +
Sbjct: 530  --IRDLHSLLRFLRITGGIEQPEVFNMVIGRPIALKQRRAVSLLQHLMNDLCLRRLKDMK 587

Query: 790  KTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTV---------RRNILMADWND-PSHVE 839
              DL+ +P   + +  + F E+    Y+ L+            R+    A+ N   S +E
Sbjct: 588  FVDLK-LPAKTEYIHRITFWEDEKKKYDALLSEAQGALRDFQSRKKGRGAEKNRFQSVLE 646

Query: 840  SLLNPKQW-KFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPL------- 891
             LL  +Q   F S  I    L+C    H   T   + I + + +L +N + PL       
Sbjct: 647  RLLRLRQTCVFSSVCIVTFALTCHSCNHW--TLCKDRITDLLQLLEDNDVVPLNAKNRAL 704

Query: 892  ----------SQEYAFIKYNLLNG---GNCLRHILCLDCVAMDSE---KCSLPGC-GFLY 934
                      SQE   + + ++      +C +H  C  C++   E   KC  P C   L 
Sbjct: 705  LQQALQLFIESQEECPVCFEVMKSPVITHC-KHAFCRPCISKVIEIQGKC--PMCRASLS 761

Query: 935  EMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKV 994
            E    E       P P+  + +  ++      + S T   LK  + +  L+   +   KV
Sbjct: 762  EDNLVE-------PAPEKGIEEMEVDNLDRETKSSKTEALLK--ILQATLKKEGS---KV 809

Query: 995  IIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNK---IKSLDMFRHDASCLALLMDGS 1051
            IIFSQ+   ++VI++QL  AG  +  +   M+++ +   IK+LD   +    LA L    
Sbjct: 810  IIFSQWTSFLNVIQRQLDEAGYTYTRIDGSMNATKRDVAIKALDEDPNTRIMLASL--AV 867

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             S+GL+L     V L +  W  ++E+Q + R HR+G TR   V  L M GTVEE++L+ 
Sbjct: 868  CSVGLNLVSADTVVLADSWWAPAIEDQAVDRVHRLGQTRETTVWRLVMEGTVEERVLDI 926


>gi|317149015|ref|XP_001823065.2| SNF2 family helicase [Aspergillus oryzae RIB40]
          Length = 924

 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 232/533 (43%), Gaps = 60/533 (11%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVR---PGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
            S+ TLIV P  ++ +WK QIQ H       Q+H++  T  K+ +       YDVV+T++ 
Sbjct: 392  SKTTLIVAPVGVMSNWKNQIQDHTHSESAPQVHVYHGTGKKEAANLD---QYDVVVTSYG 448

Query: 670  RLSAEWGRRKKSP----MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLT 724
             L+ E+    K P    +  VHW RV+LDEGHT+    N  +K  +A  +L A +RW LT
Sbjct: 449  ALALEYNPNAKVPPKKGIFSVHWRRVVLDEGHTI---RNPRSKGALAACNLRADSRWTLT 505

Query: 725  GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRC 784
            GTP  N+    L  L   ++FL      ++   +   ++RP  +E    R  LLQ L   
Sbjct: 506  GTPIVNS----LKDLYSQVRFLKLSGGLEDMTVFTSVLIRPLMSEDPNAR-LLLQALMST 560

Query: 785  MISARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVES 840
            +   R+ D++ +    P     V  + F       Y+      R  +L     D S    
Sbjct: 561  ICLRRRKDMEFVNLRLPPLTSRVLRIKFHTHEQEKYDMFQSEARGMLLDFKSKDKSST-- 618

Query: 841  LLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQE-----Y 895
                  +      I  LR  C      K     + I++   +L +N + PL+ E      
Sbjct: 619  -----TYSHLLEVILRLRQVCNHWALCK-----DRIEKLAQLLEDNKVVPLTPENIKALQ 668

Query: 896  AFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNP--KWP 953
              ++  + +   C    +CLD +    E+  +  C   +     E +   ++  P  +  
Sbjct: 669  DMLRIQIESQETC---PICLDTL----EQPVITACAHTFCKGCIEQVIERQHKCPMCRAE 721

Query: 954  VPQDLIELQPSYRQWSNTNTFLKQ-DLYRPNLES--------NKALPDKVIIFSQFLEHI 1004
            +      ++P+     +T T +   D     +E+         +A   K ++FSQ+   +
Sbjct: 722  ITDTSTLVEPAVEMGESTETVVADPDTPSSKIEALIKILTAQGQAPGTKTVVFSQWTSFL 781

Query: 1005 HVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTR 1063
            +++E  L   G+ FA +   M S  +  S   F HD +C  LL   S  S+GL+L    +
Sbjct: 782  NLLEPHLNRYGVGFARVDGKMSSLARDNSTYRFSHDPNCKVLLASLSVCSVGLNLVAANQ 841

Query: 1064 VFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
              L +  W  ++E+Q + R +R+G TR   V  L M  ++E+++L  +Q+T R
Sbjct: 842  AILADSWWAPAIEDQAVDRVYRLGQTRETTVWRLVMEDSIEDRVLA-IQETKR 893



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 31/146 (21%)

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFY------VNTVSGDIAT 215
            +  +L P+Q+  + WM+ +E       +P      +ED    +         ++ + +T
Sbjct: 300 ALSTELLPYQRQGLAWMIEKE-------NPTLPAAGSEDVVQLWKRKDNRFTNIATNFST 352

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLIL-----KTQG----TLADPPDGVKIIWCTH 266
             AP +    GG+  D+ GLGKTI  +SLIL     KT G    TL   P GV   W   
Sbjct: 353 SIAPPL--ASGGILADDMGLGKTIQIISLILANSAPKTPGYSKTTLIVAPVGVMSNWKNQ 410

Query: 267 NGD-------PRCGYYDLSGDKLTCN 285
             D       P+   Y  +G K   N
Sbjct: 411 IQDHTHSESAPQVHVYHGTGKKEAAN 436


>gi|83771802|dbj|BAE61932.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 826

 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 232/533 (43%), Gaps = 60/533 (11%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVR---PGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
            S+ TLIV P  ++ +WK QIQ H       Q+H++  T  K+ +       YDVV+T++ 
Sbjct: 294  SKTTLIVAPVGVMSNWKNQIQDHTHSESAPQVHVYHGTGKKEAANLD---QYDVVVTSYG 350

Query: 670  RLSAEWGRRKKSP----MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLT 724
             L+ E+    K P    +  VHW RV+LDEGHT+    N  +K  +A  +L A +RW LT
Sbjct: 351  ALALEYNPNAKVPPKKGIFSVHWRRVVLDEGHTI---RNPRSKGALAACNLRADSRWTLT 407

Query: 725  GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRC 784
            GTP  N+    L  L   ++FL      ++   +   ++RP  +E    R  LLQ L   
Sbjct: 408  GTPIVNS----LKDLYSQVRFLKLSGGLEDMTVFTSVLIRPLMSEDPNAR-LLLQALMST 462

Query: 785  MISARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVES 840
            +   R+ D++ +    P     V  + F       Y+      R  +L     D S    
Sbjct: 463  ICLRRRKDMEFVNLRLPPLTSRVLRIKFHTHEQEKYDMFQSEARGMLLDFKSKDKSST-- 520

Query: 841  LLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQE-----Y 895
                  +      I  LR  C      K     + I++   +L +N + PL+ E      
Sbjct: 521  -----TYSHLLEVILRLRQVCNHWALCK-----DRIEKLAQLLEDNKVVPLTPENIKALQ 570

Query: 896  AFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNP--KWP 953
              ++  + +   C    +CLD +    E+  +  C   +     E +   ++  P  +  
Sbjct: 571  DMLRIQIESQETC---PICLDTL----EQPVITACAHTFCKGCIEQVIERQHKCPMCRAE 623

Query: 954  VPQDLIELQPSYRQWSNTNTFLKQ-DLYRPNLES--------NKALPDKVIIFSQFLEHI 1004
            +      ++P+     +T T +   D     +E+         +A   K ++FSQ+   +
Sbjct: 624  ITDTSTLVEPAVEMGESTETVVADPDTPSSKIEALIKILTAQGQAPGTKTVVFSQWTSFL 683

Query: 1005 HVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTR 1063
            +++E  L   G+ FA +   M S  +  S   F HD +C  LL   S  S+GL+L    +
Sbjct: 684  NLLEPHLNRYGVGFARVDGKMSSLARDNSTYRFSHDPNCKVLLASLSVCSVGLNLVAANQ 743

Query: 1064 VFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
              L +  W  ++E+Q + R +R+G TR   V  L M  ++E+++L  +Q+T R
Sbjct: 744  AILADSWWAPAIEDQAVDRVYRLGQTRETTVWRLVMEDSIEDRVLA-IQETKR 795



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 31/146 (21%)

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFY------VNTVSGDIAT 215
            +  +L P+Q+  + WM+ +E       +P      +ED    +         ++ + +T
Sbjct: 202 ALSTELLPYQRQGLAWMIEKE-------NPTLPAAGSEDVVQLWKRKDNRFTNIATNFST 254

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLIL-----KTQG----TLADPPDGVKIIWCTH 266
             AP +    GG+  D+ GLGKTI  +SLIL     KT G    TL   P GV   W   
Sbjct: 255 SIAPPL--ASGGILADDMGLGKTIQIISLILANSAPKTPGYSKTTLIVAPVGVMSNWKNQ 312

Query: 267 NGD-------PRCGYYDLSGDKLTCN 285
             D       P+   Y  +G K   N
Sbjct: 313 IQDHTHSESAPQVHVYHGTGKKEAAN 338


>gi|358401083|gb|EHK50398.1| hypothetical protein TRIATDRAFT_211836 [Trichoderma atroviride IMI
            206040]
          Length = 829

 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 231/529 (43%), Gaps = 68/529 (12%)

Query: 613  SRATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            SR+TL++VPS  LV +W  +I  +++  ++    +    +P+      D DVV+TT++ L
Sbjct: 301  SRSTLVIVPSALLVYNWIDEINSYLKK-EVKKIKYHGSDRPTELEEILDSDVVVTTYSTL 359

Query: 672  SAEW-GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
             AE+  + KKS + +V W R++LDE H +     L    +    L AS RW LTGTP  N
Sbjct: 360  KAEFQNKSKKSLLHRVDWYRIVLDEAHIIRRRATLF--YRSCDELHASFRWCLTGTPIQN 417

Query: 731  TPNSQLSHLQPMLKFLHEEAYGQNQ--KAWDGGILRPFEAEMEEG------RSRLLQLLH 782
                +L+ +  +  F+  E + +    + W   I  PFE   ++       + RL+ L+ 
Sbjct: 418  ----KLTDIGTLFAFIRAEPFSKAAIFRKW---IEVPFEQSTDDSIAATAVKDRLVMLIE 470

Query: 783  R-CMISARKT-DLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL--MADWNDPSHV 838
              C+   +++ DL  +  C++E+T   FT E    Y      + R IL  + + +  SH 
Sbjct: 471  ALCLRRTKESIDLPNVRTCLRELT---FTPEEREQYENTKKILTRMILHRVGEIDKASHF 527

Query: 839  ESL---------------LNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVL 883
             +                  P  W+ RS        +  +  + ++  +G   Q  M +L
Sbjct: 528  GTFQMNLQMRLLCNHGTYQQPFSWRRRSYQDEREAAAGALGQNHEICCSG--CQLPMPIL 585

Query: 884  VENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILT 943
               G   L  +Y            C  H+LC +C+    +K   P C        P+++ 
Sbjct: 586  ---GSSWLRSDY---------NKRC-NHVLCSECIEESGKKAECPVC---LSSLGPDMMR 629

Query: 944  RPENPN----PKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQ 999
               + N    P WP  +        Y      +T +K  +     + N+    K IIFS 
Sbjct: 630  NNASTNGEDVPDWPANEAAGNSDDHYFNMVGHSTKMKALIKDVEKDLNET---KSIIFSC 686

Query: 1000 FLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM-DGSASLGLDL 1058
            +   + ++ + L  A I++  +      S + K L  F  D     L+M  G+   GL+L
Sbjct: 687  WTRTLKLLSRYLEEANIQYFCIDGTSSLSQRQKKLKQFAKDDQKRVLIMTTGTGGFGLNL 746

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            +   R+F++E  W+  +E Q I+RA R+G    + V    ++GTVEE+M
Sbjct: 747  TCANRIFIVELQWNPGVESQAIARAIRLGQKCEVKVTRYLIKGTVEEEM 795



 Score = 47.0 bits (110), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 166 KLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGD-IATGTAPTMRDF 224
           +L  HQQ A+ +M+ RE      R+ L+     ++G   Y + ++   I  G  P   + 
Sbjct: 196 ELLSHQQEALGFMVERESGDINDRYRLWETKTLDNGTEEYCHRITKQKIKNGIRPD--ES 253

Query: 225 HGGMFCDEPGLGKTITALSLILKTQGTLAD 254
            GG+  DE G+GKT++ L+LI+KT G   +
Sbjct: 254 GGGILADEMGMGKTLSILALIVKTLGVATE 283


>gi|346970399|gb|EGY13851.1| DNA repair protein RAD16 [Verticillium dahliae VdLs.17]
          Length = 931

 Score =  129 bits (325), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 150/595 (25%), Positives = 249/595 (41%), Gaps = 100/595 (16%)

Query: 590  LAFDLAALRLALCEPLDSVRLYLSRA----TLIVVPSYLVDHWKTQIQQHVRPGQ---LH 642
            L+  + A  + L + L  + L LS      TLIV P  ++ +W+ Q   HVR  +   +H
Sbjct: 391  LSGGILADDMGLGKTLQVISLILSGTGSGPTLIVAPVSVMSNWQQQFDAHVRKDKAPKIH 450

Query: 643  LFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE---WGRRKKSPMMQVHWLRVMLDEGHTL 699
            +     H   +A      YD+VIT++ +L+ E        + P+M V W RV+LDEGH +
Sbjct: 451  I-----HHGSAASEELSGYDIVITSYGKLAKERLETTDSARGPLMSVDWRRVVLDEGHII 505

Query: 700  GSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWD 759
             ++   T   + A  L A++RW+LTGTP  N     L  LQ ML FLH     +    ++
Sbjct: 506  RNA--KTQAARAACQLKAASRWVLTGTPIVNN----LQDLQSMLSFLHMTGGVEQPTIFN 559

Query: 760  GGILRPFEAEMEEGRSRLLQLLHRCMISARK----TDLQTIPLC--IKEVTFLN------ 807
              I RP     +   + L  ++H   +  RK     DL+  P    +  +TF +      
Sbjct: 560  TVITRPLTWGHKRAEALLQNIMHDLCLRRRKDMAFVDLKLPPKTEYVHRITFRSDESEKY 619

Query: 808  --FTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQ----WKFRSTTIRNLRLSC 861
                +E  G   E     R   +       S +E LL  +Q    W      I +L    
Sbjct: 620  KVLLQEAQGVLQEYQSQARTGRVPFQ----SVLEKLLRLRQTCNHWTLCRARIDDLLKVL 675

Query: 862  CVAGHIKVTDAGEDI-QETMDVLVENGLDPLSQEYAFIKYNLLNG---GNCLRHILCLDC 917
                 + + D  + + Q+ + + +E      +QE   I ++ L+     +C +H+ C  C
Sbjct: 676  EGQDVVVLNDKNKAVLQQALRLFIE------TQEDCPICFDTLSEPVITHC-KHVYCRRC 728

Query: 918  VAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQD-LIELQPSYRQWSNTNTF-- 974
            +              + E+Q        + P  + P+  D L+E  P   Q  + N F  
Sbjct: 729  ITK------------VIELQR-------KCPMCRQPLGVDSLLEPAPEEGQDDDANAFDG 769

Query: 975  -----LKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSN 1029
                   + L +    + K    KV+IFSQ+   +++I+ Q+  AG+K+  +   M    
Sbjct: 770  ETQSSKTEALLKIVQATCKDPQSKVVIFSQWTSFLNIIQTQIEEAGLKWTRIDGSMKPDK 829

Query: 1030 KIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGAT 1089
            +         DA+  AL       +GL+L     V L +  W  ++E+Q + R HR+G  
Sbjct: 830  R---------DAAIAAL-------VGLNLVAADTVILADSWWAPAIEDQAVDRVHRLGQK 873

Query: 1090 RPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAE 1144
            RP  V  L M  T+EEQ+LE        R+L+ +   +  RE       + D  +
Sbjct: 874  RPTTVWRLVMENTIEEQVLEIQAAK---RQLISKAFQEKSREKKTKETRMADIVK 925


>gi|391871364|gb|EIT80524.1| helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box
            superfamily [Aspergillus oryzae 3.042]
          Length = 777

 Score =  129 bits (325), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 134/533 (25%), Positives = 230/533 (43%), Gaps = 60/533 (11%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVR---PGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
            S+ TLIV P  ++ +WK QIQ H       Q+H++  T  K+ +       YDVV+T++ 
Sbjct: 245  SKTTLIVAPVGVMSNWKNQIQDHTHSESAPQVHIYHGTGKKEAANLD---QYDVVVTSYG 301

Query: 670  RLSAEWGRRKKSP----MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLT 724
             L+ E+    K P    +  VHW RV+LDEGHT+    N  +K  +A  +L A +RW LT
Sbjct: 302  ALALEYNPNAKVPPKKGIFSVHWRRVVLDEGHTIR---NPRSKGALAACNLRADSRWTLT 358

Query: 725  GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRC 784
            GTP  N+       L   ++FL      ++   +   ++RP  +E    R  LLQ L   
Sbjct: 359  GTPIVNS----FKDLYSQVRFLKLSGGLEDMTVFTSVLIRPLMSEDPNAR-LLLQALMST 413

Query: 785  MISARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVES 840
            +   R+ D++ +    P     V  + F       Y+      R  +L     D S    
Sbjct: 414  ICLRRRKDMEFVNLRLPPLTSRVLRIKFHTHEQEKYDMFQSEARGMLLDFKSKDKSST-- 471

Query: 841  LLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQE-----Y 895
                  +      I  LR  C      K     + I++   +L +N + PL+ E      
Sbjct: 472  -----TYSHLLEVILRLRQVCNHWALCK-----DRIEKLAQLLEDNKVVPLTPENIKALQ 521

Query: 896  AFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNP--KWP 953
              ++  + +   C    +CLD +    E+  +  C   +     E +   ++  P  +  
Sbjct: 522  DMLRIQIESQETC---PICLDTL----EQPVITACAHTFCKGCIEQVIERQHKCPMCRAE 574

Query: 954  VPQDLIELQPSYRQWSNTNTFLK---------QDLYRPNLESNKALPDKVIIFSQFLEHI 1004
            +      ++P+     +T T +          + L +      +A   K ++FSQ+   +
Sbjct: 575  ITDTSTLVEPAVEMGESTETVVADPDTPSSKIEALIKILTAQGQAPGTKTVVFSQWTSFL 634

Query: 1005 HVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTR 1063
            +++E  L   G+ FA +   M S  +  S   F HD +C  LL   S  S+GL+L    +
Sbjct: 635  NLLEPHLNRYGVGFARVDGKMSSLARDNSTYRFSHDPNCKVLLASLSVCSVGLNLVAANQ 694

Query: 1064 VFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
              L +  W  ++E+Q + R +R+G TR   V  L M  ++E+++L  +Q+T R
Sbjct: 695  AILADSWWAPAIEDQAVDRVYRLGQTRETTVWRLVMEDSIEDRVLA-IQETKR 746



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 31/146 (21%)

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFY------VNTVSGDIAT 215
            +  +L P+Q+  + WM+ +E       +P      +ED    +         ++ + +T
Sbjct: 153 ALSTELLPYQRQGLAWMIEKE-------NPTLPAAGSEDVVQLWKRKDNRFTNIATNFST 205

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLIL-----KTQG----TLADPPDGVKIIWCTH 266
             AP +    GG+  D+ GLGKTI  +SLIL     KT G    TL   P GV   W   
Sbjct: 206 SIAPPL--ASGGILADDMGLGKTIQIISLILANSAPKTPGYSKTTLIVAPVGVMSNWKNQ 263

Query: 267 NGD-------PRCGYYDLSGDKLTCN 285
             D       P+   Y  +G K   N
Sbjct: 264 IQDHTHSESAPQVHIYHGTGKKEAAN 289


>gi|347830443|emb|CCD46140.1| similar to SNF2 family helicase/ATPase [Botryotinia fuckeliana]
          Length = 1176

 Score =  129 bits (325), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 138/568 (24%), Positives = 241/568 (42%), Gaps = 87/568 (15%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            + TL+V P  ++ +W+ QI+ H++   L  +++    +    +   +YD+VITT+  +++
Sbjct: 592  KTTLLVAPLSVISNWEDQIRAHIKSDALKYYIYHGANRIKDVTKLSEYDMVITTYGSVAS 651

Query: 674  EWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            E   R K      P+ +++W R++LDE H +     L  + +    L+A  RW  TGTP 
Sbjct: 652  ECNNRNKKKDGKYPLEEMNWFRIVLDEAHMIREQSTL--QFKAICRLSAQRRWACTGTPV 709

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N    +L  L  ++ FL  + +  N   +   IL PF+    E   + L+LL   +   
Sbjct: 710  QN----RLEDLGALMNFLRVKPF--NGSGFAQHILSPFKICDPEIIPK-LRLLVDSITLR 762

Query: 789  RKTDLQTIPLCIKEVTFLNFTEEHAGTYN--ELVVTVRRNILMADWNDPSHVESLLNPKQ 846
            R  D   +P    ++  L+F++E    Y+  E   T R  ++       S  ES L  K 
Sbjct: 763  RLKDKIDLPKRHDQIARLDFSDEERMVYDIFEKNATDRLKVIT------SQGESALGGKT 816

Query: 847  WKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEY----------A 896
            +     +I  LR  C    H K   + ED++    +  ++ +D  S+EY          A
Sbjct: 817  FHHILQSILRLRQVCA---HGKDLLSAEDLKIMNGLSKDSAIDLDSEEYEDHDGMTPKQA 873

Query: 897  FIKYNLL---NGGNCLR-----------------------------HILCLDCVAMDSEK 924
            +  Y L+      +CL                              HI+C  C+     +
Sbjct: 874  YEMYKLMRDTGTDSCLTCNRKIGPQDVVDSDGESKEEVIGYMTPCFHIICGLCIGAYKSQ 933

Query: 925  C-------SLPGCGFLYEMQSPEIL--TRPENPNPKWPVPQDLIELQPSYRQWSN----- 970
                    SL GC   ++  SP +    + E  + +        E   + +  SN     
Sbjct: 934  LEELAVGGSLVGCPTCHQQISPSMFFSLKQEEVDKEEESRLKTKESAKAGKDLSNYGGPH 993

Query: 971  TNTF-LKQDLYRPNLESN---KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMH 1026
            T T  L  DL     ES       P K ++FS +  H+ +I+  L    I +  +   M 
Sbjct: 994  TKTIALIHDLLASRKESQARPNEPPIKSVVFSGWTTHLDLIQLALQENNIPYTRLDGKMT 1053

Query: 1027 SSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHR 1085
               +  +++ FR D S + +L+   +  LGL+L+   +V++MEP ++ + E Q I R HR
Sbjct: 1054 RIARSMAMENFREDPSIVVILVSIAAGGLGLNLTTANKVYVMEPQFNPAAEAQAIDRVHR 1113

Query: 1086 MGATRPIHVETLAMRGTVEEQMLEFLQD 1113
            +G  R +      M  + EE+ML+ +QD
Sbjct: 1114 LGQKREVQTVRFIMNKSFEEKMLQ-IQD 1140


>gi|154302115|ref|XP_001551468.1| hypothetical protein BC1G_09738 [Botryotinia fuckeliana B05.10]
          Length = 1176

 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 138/568 (24%), Positives = 241/568 (42%), Gaps = 87/568 (15%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            + TL+V P  ++ +W+ QI+ H++   L  +++    +    +   +YD+VITT+  +++
Sbjct: 592  KTTLLVAPLSVISNWEDQIRAHIKSDALKYYIYHGANRIKDVTKLSEYDMVITTYGSVAS 651

Query: 674  EWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            E   R K      P+ +++W R++LDE H +     L  + +    L+A  RW  TGTP 
Sbjct: 652  ECNNRNKKKDGKYPLEEMNWFRIVLDEAHMIREQSTL--QFKAICRLSAQRRWACTGTPV 709

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N    +L  L  ++ FL  + +  N   +   IL PF+    E   + L+LL   +   
Sbjct: 710  QN----RLEDLGALMNFLRVKPF--NGSGFAQHILSPFKICDPEIIPK-LRLLVDSITLR 762

Query: 789  RKTDLQTIPLCIKEVTFLNFTEEHAGTYN--ELVVTVRRNILMADWNDPSHVESLLNPKQ 846
            R  D   +P    ++  L+F++E    Y+  E   T R  ++       S  ES L  K 
Sbjct: 763  RLKDKIDLPKRHDQIARLDFSDEERMVYDIFEKNATDRLKVIT------SQGESALGGKT 816

Query: 847  WKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEY----------A 896
            +     +I  LR  C    H K   + ED++    +  ++ +D  S+EY          A
Sbjct: 817  FHHILQSILRLRQVCA---HGKDLLSAEDLKIMNGLSKDSAIDLDSEEYEDHDGMTPKQA 873

Query: 897  FIKYNLL---NGGNCLR-----------------------------HILCLDCVAMDSEK 924
            +  Y L+      +CL                              HI+C  C+     +
Sbjct: 874  YEMYKLMRDTGTDSCLTCNRKIGPQDVVDSDGESKEEVIGYMTPCFHIICGLCIGAYKSQ 933

Query: 925  C-------SLPGCGFLYEMQSPEIL--TRPENPNPKWPVPQDLIELQPSYRQWSN----- 970
                    SL GC   ++  SP +    + E  + +        E   + +  SN     
Sbjct: 934  LEELAVGGSLVGCPTCHQQISPSMFFSLKQEEVDKEEESRLKTKESAKAGKDLSNYGGPH 993

Query: 971  TNTF-LKQDLYRPNLESN---KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMH 1026
            T T  L  DL     ES       P K ++FS +  H+ +I+  L    I +  +   M 
Sbjct: 994  TKTIALIHDLLASRKESQARPNEPPIKSVVFSGWTTHLDLIQLALQENNIPYTRLDGKMT 1053

Query: 1027 SSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHR 1085
               +  +++ FR D S + +L+   +  LGL+L+   +V++MEP ++ + E Q I R HR
Sbjct: 1054 RIARSMAMENFREDPSIVVILVSIAAGGLGLNLTTANKVYVMEPQFNPAAEAQAIDRVHR 1113

Query: 1086 MGATRPIHVETLAMRGTVEEQMLEFLQD 1113
            +G  R +      M  + EE+ML+ +QD
Sbjct: 1114 LGQKREVQTVRFIMNKSFEEKMLQ-IQD 1140


>gi|325095596|gb|EGC48906.1| transcription factor [Ajellomyces capsulatus H88]
          Length = 929

 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 232/544 (42%), Gaps = 88/544 (16%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ TL++ P  ++ +W+ QI  H+   Q L + ++    K  A +L   YDVVITT+  L
Sbjct: 391  SKTTLVISPLGVMSNWRDQISHHIHKDQALRVLIYHGVGKKEAKNLN-TYDVVITTYGAL 449

Query: 672  SAEWGRRKKSP--------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
            ++E+   +  P        +  + W R++LDEGHT+ +    T   + A  L A +RW L
Sbjct: 450  ASEYALIENKPLNSKPSEGLFSLRWRRIVLDEGHTIRNP--RTRGARAACRLEADSRWSL 507

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTP  N     L  L   +K+L      ++   ++  ++RP     E   S LLQ L  
Sbjct: 508  TGTPIINN----LKDLYSQIKYLRISGGLEDLAVFNSAVIRPL-TTCEPNASLLLQALMS 562

Query: 784  CMISARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL--MADWNDPSH 837
             +   RK ++  I    P     V  + F       Y+ L    +  +L   A+ N+   
Sbjct: 563  TICLRRKKEMNFINLRLPPLSSHVLRVKFLPHEQEKYDMLQAEAKGVLLDYHANANNKKG 622

Query: 838  -------VESLLNPKQ----WKFRSTTIRNL-------RLSCCVAGHIKVTDA----GED 875
                   +E LL  +Q    WK     I NL       ++      +IK   A      +
Sbjct: 623  GATYSVLLEVLLRMRQVCNHWKLCQNRINNLMEMLEEHKVVALSPQNIKALQALLQLKIE 682

Query: 876  IQET----MDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHIL-----CLDCVAMDSEKCS 926
             QE     +D L +  + P +  + +         +C+   +     C  C A   +  S
Sbjct: 683  SQEICAICLDTLQQPVITPCAHTFDY---------SCIEQAIEHQHKCPLCRAEIEDCKS 733

Query: 927  LPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLES 986
            L      +   + EI   PE  + K    Q L+++  +  Q  NT               
Sbjct: 734  LVAPSADFGEDTNEIDINPETTSSKI---QALLKILTAKGQAPNT--------------- 775

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
                  K ++FSQ++  + ++E QL   GI FA +   M S+ +  +++   +D++C  L
Sbjct: 776  ------KTVVFSQWVSFLDIVEPQLVRNGITFARIDGKMSSAKRDAAMNALSNDSNCTVL 829

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            L      S+GL+L    +V L +  W  ++E+Q + R +R+G  RP  +  L M  ++E+
Sbjct: 830  LASLNVCSVGLNLVAANQVILADSWWAPAIEDQAVDRVYRLGQKRPTTIWRLVMENSIED 889

Query: 1106 QMLE 1109
            ++L+
Sbjct: 890  RVLD 893



 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 17/118 (14%)

Query: 159 IMPCMK---LKLFPHQQAAVEWMLHREWNAEVLRHPL-YIDLATEDGFYFYVNTVSGDIA 214
           + PC K    +L P+Q+  + WML +E      +     + L    G  F    ++ +  
Sbjct: 293 MAPCPKALSTELLPYQRQGLAWMLDKESPKLPSKGSQDVVQLWKRSGHMF--TNIATNYT 350

Query: 215 TGTAPTMRDFHGGMFCDEPGLGKTITALSLIL---------KTQGTLADPPDGVKIIW 263
           T T P +    GG+  D+ GLGKT+  +SLIL          ++ TL   P GV   W
Sbjct: 351 TATEPPLAS--GGILADDMGLGKTVQTISLILADSTPRTKDSSKTTLVISPLGVMSNW 406


>gi|255933007|ref|XP_002557974.1| Pc12g11570 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582593|emb|CAP80784.1| Pc12g11570 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1229

 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 239/533 (44%), Gaps = 56/533 (10%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            +R TL+VVP   V +W TQI++H++P  +  +V+    + +      +YD+VITT++ + 
Sbjct: 683  TRTTLLVVPLSAVSNWVTQIKEHLKPRSVTYYVFHGPSRTTDSKELSEYDIVITTYSTIL 742

Query: 673  AEWGRR-----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            +E   R     K SP+ +++  R++LDE H +      T + +  + L +  RW +TGTP
Sbjct: 743  SEISGRGAKSGKLSPLTKMNMFRIVLDEAHVIRE--QNTAQTKAILGLNSERRWSVTGTP 800

Query: 728  TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
              N    ++  L  + +FL    Y Q  + +   +  P +       +RL  L+    + 
Sbjct: 801  IQN----RMEDLLSVTRFLRIAPYDQRSQ-FSQHVCSPVKNGDPNVLARLRVLVDSFTLR 855

Query: 788  ARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQW 847
              K  +   P   K +T LNFTE+    ++        N++M+       V +  + +Q 
Sbjct: 856  RVKDKIDLPPREDKIIT-LNFTEQEQQLHD--FFKAESNVMMS-------VIAGEDKRQI 905

Query: 848  KFR--STTIRNLRLSCCVAGHIK---------------VTDAGEDIQETMDVLVENGLDP 890
              R     ++ + +   V+ H K               V DA  D++E         +D 
Sbjct: 906  GGRMYHHVLKAMMILRQVSAHGKELLDVSDRERAKGFSVNDA-IDLEEGEPDETPAAIDK 964

Query: 891  LSQE-YAFIKY-NLLNGGNCLRH----ILCLDCVAMDSE-----KCSLPGCGFLYEMQSP 939
             + E +A I+  +    GNC R     +  +  VA DS       C    C   +    P
Sbjct: 965  KAYEMFALIQQASTPRCGNCNRELDEPLNSMGAVARDSPMAIALPCYDTFCPSCFSGWKP 1024

Query: 940  EILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQ 999
               + P+N   + P     I ++ S    +    +  Q  +  NLE     P K ++FS 
Sbjct: 1025 AFDSYPDN-QTRCPRCDGWINMKYSTITPAGFEEYEAQKEHSKNLEGQS--PIKSVVFSA 1081

Query: 1000 FLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLD 1057
            +  H+ +IE  L   G+  F  +   M  + + ++L+ F  + +   LL   G+  +GL+
Sbjct: 1082 WTSHLDLIEIALQNNGLDGFTRLDGTMTLAARTRALEEFAKNDNIKVLLATIGAGGVGLN 1141

Query: 1058 LSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            L+  +RVF+MEP ++ +   Q I R HR+G TRP+      M+G++EE++L+ 
Sbjct: 1142 LTSASRVFIMEPQYNPAAVAQAIDRIHRLGQTRPVQTFQFIMKGSIEEKILDL 1194


>gi|225432997|ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Vitis vinifera]
          Length = 1224

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 152/580 (26%), Positives = 255/580 (43%), Gaps = 101/580 (17%)

Query: 610  LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
            L +   TLIV P  L+  WK +++ H +P  + +F+     + +   +  ++DVV+TT+ 
Sbjct: 682  LNVKGGTLIVCPMALLSQWKDELETHSKPESISIFIHYGGDRTNDPKVISEHDVVLTTYG 741

Query: 670  RLSAEWGRRKKSPMM-QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
             L++ +   + S +  +V W RV+LDE HT+ SS  L+   Q A +L +  RW LTGTP 
Sbjct: 742  VLTSAYKNDENSSIFHRVEWYRVVLDEAHTIKSSKTLS--AQAAFALPSHCRWCLTGTPL 799

Query: 729  PNTPNSQLSHLQPMLKFLHEEA-------YGQNQKAWDGG----------ILRPF----- 766
             N     L  L  +L FLH E        Y   QK ++ G          ILRP      
Sbjct: 800  QNN----LEDLYSLLCFLHVEPWCNWAWWYKLIQKPYECGDQRGLRLIKAILRPLMLRRT 855

Query: 767  -EAEMEEGRSRL------LQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYN-- 817
             + + +EGR  L      +Q++  C  S  + D         +V F  F E+    +N  
Sbjct: 856  KDTKDKEGRPILVLPPTDIQVIE-CEQSEAEHDFYDALFKRSKVRFDQFVEQGRVLHNYA 914

Query: 818  ---ELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRN-LRLSCC----------- 862
               EL++ +R+       N P  V S  + +Q+   S   R  L  + C           
Sbjct: 915  SILELLLRLRQCC-----NHPFLVMSRGDTQQYADLSKLARKFLENNPCSDTSNHSIPTR 969

Query: 863  -----VAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDC 917
                 V G I+    GE+ +    + +E+  DP+    A              H++C +C
Sbjct: 970  AFVEEVVGGIR---RGENTE--CPICLESADDPVLTPCA--------------HLMCREC 1010

Query: 918  VAMDSEKCSLPG-CGFLYEM-QSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFL 975
            + + S +  L G C    ++ +  +++T P     +       I+++ ++++ S  +  L
Sbjct: 1011 L-LSSWRTPLSGLCPICRKLLKKTDLITCPSENRFR-------IDVEKNWKESSKISELL 1062

Query: 976  KQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLD 1035
               L R    S   + +K I+FSQ+   + ++E  L   GI F      +    + + L 
Sbjct: 1063 -HCLERI---SQSRIGEKSIVFSQWTSFLDLLEIPLRRRGIGFLRYDGKVVQKQRERILK 1118

Query: 1036 MFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
             F        LLM   +  +GL+L+  + VFLM+P W+ ++EEQ I R HR+G  R + V
Sbjct: 1119 EFSETEEKTVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQERTVRV 1178

Query: 1095 ETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
                ++ TVEE+M    Q   R +R++   L   E   AR
Sbjct: 1179 RRFIVKDTVEERM---QQVQARKQRMITGALTDEEVRTAR 1215



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYI-------DLATEDGFYFYVNTVSGDIATGTAP 219
           L P+Q+ A+ WM   E  ++  + P  +        +  E     YVN  SG+  T    
Sbjct: 560 LRPYQKQALYWMSELEKGSDAEQAPKTLHPCWAAYQICDERASAIYVNIFSGEATTQLPT 619

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLILKTQG 250
            +    GG+  D  GLGKT+  ++LIL   G
Sbjct: 620 AIHMARGGILADAMGLGKTVMTIALILARPG 650


>gi|301116776|ref|XP_002906116.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262107465|gb|EEY65517.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 774

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 167/386 (43%), Gaps = 65/386 (16%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK----PSAHSLAWDYDVVI 665
           L  SRATL+V P  LV+HW  QI  HV    L  +V    K     P +  LA  YDVVI
Sbjct: 137 LVSSRATLVVAPDALVEHWAEQIDMHVAHQGLKFYVDRAEKIQEALPRSKKLA-KYDVVI 195

Query: 666 TTFNRLSAEWG------------------------------RRKKSPMMQVHWLRVMLDE 695
            +F+R++ EW                               R   S ++ VHWLR+++DE
Sbjct: 196 VSFSRMAKEWKLHRPASAMERHNISRYGFEDQPDRYVDGSLRGDVSSLLLVHWLRIVVDE 255

Query: 696 GHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS-QLSHLQPMLKFLHEEAYGQ- 753
           GH LG     T  +QM+  L A  RW++TGTP+PNT  S  L ++  +L FL  + YG+ 
Sbjct: 256 GHKLGGRAP-TQLMQMSRLLCAERRWVMTGTPSPNTLQSADLQYIHGLLVFLRSQPYGRP 314

Query: 754 NQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQT-IPLCIKEVTFLNFTEEH 812
           +  AW   I RPF+     G  RL  LL R MI   K  ++  +P  I+    ++ +   
Sbjct: 315 DGHAWSKAIARPFQRNEVTGFYRLQHLLSRIMIRHTKESIRDFLPRPIRHTVVVDPSPSE 374

Query: 813 AGTYNELVVTVRRNILMADWNDPS---------HVESLLNPKQWKFRSTTIRNLRLSCCV 863
              YN +   VR  +++   + P          H +SLL+ K  +       +L ++   
Sbjct: 375 FKLYNAIAENVRAGLVITTIDLPKSSSHTPGDVHPDSLLHRKNHQGAGHVESDLAIAFMG 434

Query: 864 AGHIKVTDAGEDIQETMDVLVENGLDP--LSQEYAFIKYNLLNGGNCLR----------- 910
              +  T   + +++++D L + G++   +S    +++  L       R           
Sbjct: 435 GYAVDWTVKKDKMKKSLDKLRDAGVNEARMSAVSKYLESVLHKEKTICRECGLERRFLMV 494

Query: 911 ----HILCLDCVAMDSEKCSLPGCGF 932
               H+ C  CV    ++   P C F
Sbjct: 495 LPCGHLCCAHCVEDIKKELGEPCCNF 520



 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 20/105 (19%)

Query: 163 MKLKLFPHQQAAVEWMLHRE----WNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTA 218
           + L L+ HQ+  + WM+ RE    W+  +L HP  +     D           ++ T  +
Sbjct: 19  LDLTLYEHQRRGLSWMMKRESAVLWDT-LLLHPFSVPGRDSDS--------DVELETEFS 69

Query: 219 PTMRDFHGGMFCDEPGLGKTITALSLILKTQG-------TLADPP 256
            T  D  GGM CDEPGLGKTIT L+LIL T+G          DPP
Sbjct: 70  ETAYDACGGMLCDEPGLGKTITMLALILLTRGQWTSNLPARVDPP 114



 Score = 50.4 bits (119), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 1009 QQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLME 1068
            +Q  +    F  + +P     +I++L++FR   +   LL+    S GLDLSFVT +FL+E
Sbjct: 706  EQQDIPTADFIALINP---RKRIENLEVFRSSPNVHVLLLSNLGSHGLDLSFVTHIFLLE 762

Query: 1069 PIWDRS 1074
             IWD+S
Sbjct: 763  EIWDKS 768


>gi|452989744|gb|EME89499.1| hypothetical protein MYCFIDRAFT_49082 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 950

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 241/543 (44%), Gaps = 79/543 (14%)

Query: 616  TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTFNRLS 672
            TL+V P  ++ +W  Q Q H    +  L V+T H        A D   YD+V+TT+  L+
Sbjct: 410  TLVVAPVSVLSNWSGQAQFHTHDDR-KLSVYTYHASGRVKMKAEDFSQYDIVLTTYGTLA 468

Query: 673  AEWGRRK----------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            +++G +K           S +  V W R++LDEGH++ +    T     A+ L A +RW+
Sbjct: 469  SDFGVKKGSVIPERKLRSSGLYSVEWRRIILDEGHSIRNPA--TKAAAAAMGLIARSRWV 526

Query: 723  LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
            LTGTP  N+    L  L  +L+F+         + ++  ++RP ++      + LLQ + 
Sbjct: 527  LTGTPIVNS----LKDLFSLLRFVGITGGLDQLETFNAVLVRPLKSGSSSANN-LLQAIM 581

Query: 783  RCMISARKTDLQTIPLCIKE----VTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSH- 837
            R     R+ D+  + L + +    V  ++FT +    Y+ L  T     LM  ++     
Sbjct: 582  RSFTLRRRKDMAFVDLRLPKLDEYVHGIDFTRKEQERYDAL--TAEAKGLMRSYDKKKAA 639

Query: 838  ------------VESLLNPKQ----WKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMD 881
                        +E LL  +Q    W+     + NL     V+ ++++T   E+ +   D
Sbjct: 640  AGQSTSGAYNHLLEVLLRMRQCCNHWQLCGERVTNLLARLEVSKNVELT--AENKKALQD 697

Query: 882  VLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPE- 940
            VL               +  + +  +C    +CLD +     +  +  CG  +     E 
Sbjct: 698  VL---------------RVQMESSEDC---AICLDTL----HQPVITTCGHAFGRSCIEK 735

Query: 941  -ILTRPENPNPKWPVPQDLIELQPSYR---QWSNTNTFLKQDLYRPN-----LESNKALP 991
             I T+ + P  + P+  D   ++P+     +  + N  L Q   + +     L +N++  
Sbjct: 736  VIETQAKCPMCRAPLKDDGSLVEPANEYGDERGDDNVDLTQSSSKVDALVTILAANQSSG 795

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K I+FSQ+   + +++ +L   G K   +   M+   + K +    +DA    +L   G
Sbjct: 796  NKTIVFSQWTRFLDMVKSRLDQEGYKCCRLDGTMNVQQRDKGMHALENDAETGIMLASLG 855

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            ++++GL+L+    V L +  W  ++E+Q + R HR+G  + + V  L M  T+E+  L+ 
Sbjct: 856  ASAVGLNLTAANIVVLCDTWWAPAIEDQAVDRVHRLGQKKAVKVFRLVMNNTIEQHTLDV 915

Query: 1111 LQD 1113
             +D
Sbjct: 916  QKD 918



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 19/124 (15%)

Query: 141 DLVRIAATCRHLRCLAASIMP-CMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATE 199
           D  ++ A+   L+ +  +  P C+K ++ P+Q  A++W+L +E        P   DL ++
Sbjct: 297 DAEKLGASEDELKAMPMAAKPHCIKTEMLPYQLQALQWLLDQE-------SPKLPDLGSQ 349

Query: 200 DGFY-------FYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTL 252
                      +Y N  SG I+T T P +    GG+  D+ GLGKT+  ++L+       
Sbjct: 350 QLIQLWKADRKYYTNLASG-ISTQT-PGL--ASGGILADDMGLGKTLQMIALVASESEGQ 405

Query: 253 ADPP 256
           A  P
Sbjct: 406 ARAP 409


>gi|119498441|ref|XP_001265978.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181]
 gi|119414142|gb|EAW24081.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181]
          Length = 928

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 231/537 (43%), Gaps = 67/537 (12%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ TLI+ P  ++ +W+ QI+ H        + ++    K  A  L  +YDVVIT++  L
Sbjct: 397  SKTTLIIAPVGVMSNWRNQIKDHTHSESTPSVLIYHGAGKKEAAKLD-EYDVVITSYGAL 455

Query: 672  SAEWGRRKKSP----MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            + E+    K+     +  VHW RV+LDEGHT+ +          A +L A +RW LTGTP
Sbjct: 456  AVEYDPSAKAAPKRGLFAVHWRRVVLDEGHTIRNP--RAKGALAACNLRADSRWTLTGTP 513

Query: 728  TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
              N+    L  L   ++FL      ++   ++  ++RP  ++   GR  LLQ L   +  
Sbjct: 514  IVNS----LKDLYSQIRFLRLTGGLEDMAVFNSVLIRPLTSDDPNGR-LLLQALMSAICL 568

Query: 788  ARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILM------ADWNDPSH 837
             R+ D++ +    P     V  + F       Y ++  +  + +LM            SH
Sbjct: 569  RRRKDMEFVNLRLPALTSRVLRIKFHPHEQEKY-DMFQSEAKGMLMDFKSREKGGTTYSH 627

Query: 838  V-ESLLNPKQ----WKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLS 892
            V E LL  +Q    W      I    L+  +  H  V    E+I+   D+L    L   S
Sbjct: 628  VLEVLLRMRQVCNHWALCKHRIDA--LAGLLEKHKVVPLTPENIKALQDML---QLRIES 682

Query: 893  QEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNP-- 950
            QE   I               CLD +    E+  +  CG  Y+    E +   ++  P  
Sbjct: 683  QEMCPI---------------CLDTL----EQPVITACGHSYDRGCIEQVIERQHKCPLC 723

Query: 951  KWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPN---------LESNKALPD-KVIIFSQF 1000
            +  +      + P+     + N  +  D   P+         L +    PD K ++FSQ+
Sbjct: 724  RANIDDTSTLVAPAVDLGESANDDVDADPNNPSSKIEALIKILTAQGQAPDTKTVVFSQW 783

Query: 1001 LEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLS 1059
               + ++E  L   GI +A +   M S+ +  S   F  D  C  LL   S  S+GL+L 
Sbjct: 784  TSFLTLVEPHLQRHGIGYARIDGSMKSTARDASTYKFSKDPQCKVLLASLSVCSVGLNLV 843

Query: 1060 FVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
               +  L +  W  ++E+Q + R +R+G  R   V  L M  T+E+++LE +QDT R
Sbjct: 844  AANQAILADSWWAPAIEDQAVDRVYRLGQKRETTVWRLVMENTIEDRVLE-IQDTKR 899


>gi|347835550|emb|CCD50122.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 852

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 227/517 (43%), Gaps = 60/517 (11%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            S+ATL++VP  L+  W+ Q + H+ P  L  +++  H K S   L   +DVVITT++ ++
Sbjct: 342  SKATLLIVPPALIQVWEHQFRLHLVPRALACYIYHGHNKKSIDFLR-QFDVVITTYHTIA 400

Query: 673  AEW----GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTP 727
            A W      +    +  + W R++LDE H +    N  ++L  A  +L A+ RW +TGTP
Sbjct: 401  AIWKHHSAHQDDESLYSLTWHRIVLDEAHIIK---NPQSQLARACCALKATRRWAITGTP 457

Query: 728  TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME---EGRSRLLQLLHRC 784
              N    +L     ++KFL    Y  + K +   I  PF+       +G  RL  L+   
Sbjct: 458  IQN----KLVDFASIVKFLRVHPYS-DTKTFGEEITTPFKNSSSIDAKGFLRLKTLVRAI 512

Query: 785  MISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNP 844
             IS  KT ++ +P  + E+  L+FT      Y      VR  +L+          S  N 
Sbjct: 513  TISRTKTVIE-LPSRVDEIHHLHFTPAEREKYE--AEKVRARVLI------ERAISSGNQ 563

Query: 845  KQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLS---------QEY 895
                F   ++ N     C  G +++T        T D +V  G++ ++         QE 
Sbjct: 564  NGKIFNGLSLLNRLRLICNHGILQLTS-------TTDHVVSQGIEVVACCSMCGDYLQEE 616

Query: 896  AFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVP 955
             F      +G +  R   C  C+  + + C       L    + E L     P       
Sbjct: 617  VF-GGPFPSGIDIQRQPFCEQCILQERDNCDPSSSNTLKLPGTTEDLGSVTLPT------ 669

Query: 956  QDLIELQPSYRQWSNTNTFLKQDLYR-PNLESNKALPDKVIIFSQFLEHIHVIEQQLTVA 1014
              + + + S +  S     L  DL +  N E       K ++FS + + + +++  L+  
Sbjct: 670  --VTDTEFSIKYMSTKINALLADLQKYKNAE-------KSVVFSYWTKTLDLVQMMLSDQ 720

Query: 1015 GIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS-ASLGLDLSFVTRVFLMEPIWDR 1073
            GI++  +   M  S + ++L  F+++ +   +L+  +    GLDL+  +R +L+EP W+ 
Sbjct: 721  GIRYTRIDGTMPLSRRNEALVAFKNEDTVRVILVSITCGGAGLDLTTGSRAYLLEPHWNP 780

Query: 1074 SMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             +EEQ + R HR+   R +      M  + EEQ++E 
Sbjct: 781  MIEEQALCRVHRISQKRKVTTIRYLMHNSFEEQIVEL 817



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 5/92 (5%)

Query: 163 MKLKLFPHQQAAVEWMLHRE--WNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPT 220
           ++  LF HQ+ A+ +ML RE  WN +     ++   +   G   YVN V+G  +T  AP 
Sbjct: 234 VETSLFRHQKQALTFMLRREEGWNFDDTASDIWSLRSDTSGRLSYVNNVTG-CSTCEAPP 292

Query: 221 MRDFHGGMFCDEPGLGKTITALSLILKTQGTL 252
             +F GG+  D+ GLGKT++ +SL+   Q  L
Sbjct: 293 --EFRGGLLADDMGLGKTLSMISLVASNQACL 322


>gi|361126725|gb|EHK98714.1| putative SWI/SNF-related matrix-associated actin-dependent regulator
            of chromatin subfamily A member 3-like 1 [Glarea
            lozoyensis 74030]
          Length = 793

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 229/532 (43%), Gaps = 85/532 (15%)

Query: 616  TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH----KKPSAHSLAWDYDVVITTFNRL 671
            TLI+ P  ++ +W  Q+++H++  +  L V T H    K  S +  A  YDVVITT+ +L
Sbjct: 275  TLIIAPVSVMSNWAQQMERHIQE-EHALKVLTYHGTGIKNMSPNDFA-AYDVVITTYGKL 332

Query: 672  SAEWGRR---------KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            ++E   R          K+ +  + W RV+LDEGH + ++         A SL +  RW+
Sbjct: 333  TSELFPRGVKEAKAVPSKTGIYSMEWARVVLDEGHIIRNATTKAA--VAATSLLSKTRWV 390

Query: 723  LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
            LTGTP  NT    +  L  MLKFL      +  + ++  + RP  A  +E   ++LQ + 
Sbjct: 391  LTGTPIVNT----IKDLYSMLKFLGISGGLERMEIFNAILTRPL-AVGDENAEKILQSIM 445

Query: 783  RCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
            + M   RK D++ I         L   E+       L  T +    +   N   H     
Sbjct: 446  KTMCLRRKKDMKFID--------LRLPEKSEAEAKGLARTYKEGKQIKGANAYRH----- 492

Query: 843  NPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYA-----F 897
                  F    +R LR  CC   H K+   G+ + E + +L  +    L++E        
Sbjct: 493  ------FLEILLR-LRQLCC---HWKL--CGDRVSEMLALLDNDDAVALTEENKTALQLL 540

Query: 898  IKYNLLNGGNC--------------LRHILCLDCVAMDSE---KCSLPGCGFLYEMQSPE 940
            ++ ++ N   C               +H    +C+    E   KC  P C    E+   E
Sbjct: 541  LQLSIDNHDECSICLEELHNPVITACKHAFGQECIERTIELQHKC--PMCR--TELPDKE 596

Query: 941  ILTRPENPNPKWPVPQDL-IELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQ 999
             L   +   P  P  +D  I+      +     + LK     PN         KV+IFSQ
Sbjct: 597  CLVHAKVDEP--PTIEDADIDTDTKSSKTEALMSVLKASRKDPN--------SKVVIFSQ 646

Query: 1000 FLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDL 1058
            +   +++I++QL  A + +  +   M ++ +  ++     D  C  +L      S+GL+L
Sbjct: 647  WTSFLNIIQKQLDEASMTYTRIDGSMSATQRDSAMTALEKDPKCRIMLASLAVCSVGLNL 706

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
                 V L +  W  ++E+Q + R HR+G TRP  V  L + G+VEE++L+ 
Sbjct: 707  VAADTVILADSWWAPAIEDQAVDRVHRLGQTRPCTVWRLVVEGSVEERVLDI 758


>gi|392577354|gb|EIW70483.1| hypothetical protein TREMEDRAFT_60987 [Tremella mesenterica DSM 1558]
          Length = 893

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 143/563 (25%), Positives = 237/563 (42%), Gaps = 80/563 (14%)

Query: 589  NLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD 648
             L   L  L L L    D +    S ATLIV P  ++ +W+ QI  HV  G+L  + +  
Sbjct: 336  GLGKTLTTLSLVLATKKDQITGGYSGATLIVCPLSVLSNWEKQIADHVAMGRLTSYTYHG 395

Query: 649  HKKPSAHSLAWDYDVVITTFNRLSAEWG-----------RRKKS---PMMQVHWLRVMLD 694
              K    S   +YDVV+TT+  ++ E             ++ KS   P+ +V W RV+ D
Sbjct: 396  TGKGVTASTLKEYDVVLTTYQTVAGEAASTDISSTPASNKKAKSSAGPLFKVKWKRVVAD 455

Query: 695  EGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQ 753
            EGH L    N   ++  A ++L A  RW+ TGTP  N+P    + L  +L  LH  A   
Sbjct: 456  EGHQLK---NPKARMSQAFVALEAEKRWVCTGTPIVNSP----ADLGSLLSCLHICAPLD 508

Query: 754  NQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD--------LQTIPLCIKEVTF 805
                +   +LRP     +    +LLQ L   ++  R  D        L  +P        
Sbjct: 509  QPAYFKSLLLRPLR-NGDSNAGKLLQALVGQILLRRTKDSRDAHGNRLVELPPIEYFQCP 567

Query: 806  LNFTEEHAGTYNELVVTVRRNIL--MADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCV 863
            +   E+    Y+E+     R +   M    +P++V S+L       R+  +R+       
Sbjct: 568  VKLDEDTRKLYDEIRAASARRLQEGMQTGENPANVLSMLT------RTVDVRH-HGPAVT 620

Query: 864  AGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAF-IKYNLLNGG--NCLRHILCLDCVA- 919
            A  +      E I +   +L        S+E A  I Y+L+         H  CLDC+  
Sbjct: 621  AASLSSEKRSELIDKLRQILAN------SEECANQICYDLMTNPRITVCGHAFCLDCIVH 674

Query: 920  ---MDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLK 976
                 S+ C +        + +  +L  P +  P +  P++   +Q +  +      FL+
Sbjct: 675  WTTTKSQNCPID----RQALSAMSLLELPPDEAP-YVEPEEAPPIQSA--KIDEVVKFLR 727

Query: 977  QDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDM 1036
              L+ P         DK ++FSQF   ++ +   L  AGI+F      M +  + + +  
Sbjct: 728  --LFPPG--------DKSLVFSQFTTFLNHVATALREAGIQFCRFDGSMPAKKRQEVIAE 777

Query: 1037 F---------RHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMG 1087
            F         +H+   + L+   S ++GL+L+  + VFL +P W  ++E Q I R HRMG
Sbjct: 778  FQKPWTERNAKHNPVVM-LISLKSGAVGLNLTAASNVFLCDPWWQSAIEAQAIDRVHRMG 836

Query: 1088 ATRPIHVETLAMRGTVEEQMLEF 1110
              + + V  L    T+E ++L+ 
Sbjct: 837  QRKTVRVYQLIAEDTIESKVLDI 859


>gi|255071433|ref|XP_002499390.1| SNF2 super family [Micromonas sp. RCC299]
 gi|226514653|gb|ACO60649.1| SNF2 super family [Micromonas sp. RCC299]
          Length = 865

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 232/538 (43%), Gaps = 56/538 (10%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            +ATLIV P  ++ +W+ QI +H   G L +  +    K         +DVVITT+  L+A
Sbjct: 336  KATLIVCPVSVLSNWEQQIAEHTD-GSLSVCRYHGASKTKVTDELARHDVVITTYGTLTA 394

Query: 674  EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
            + G    + + +V WLRV+LDE H + +  N+   + +   LTA  RW +TGTP  N   
Sbjct: 395  DKG----AVLNKVKWLRVVLDEAHNVKNP-NVGQSIAVR-QLTAERRWAITGTPIQN--- 445

Query: 734  SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDL 793
             +L+ L  +L FL  +    ++  W   + +P  A    G  RL+ L+    I+ R+T  
Sbjct: 446  -RLNDLYSLLAFLRLQPL-DDRSFWTRVVDKPVHAGNPVGYDRLVTLM--AAIALRRTKA 501

Query: 794  QT-------IPLCIKEVTF--LNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNP 844
            Q        + L  KEV    +    E    Y+ L+   +  I          +E     
Sbjct: 502  QKLKDGTPLVRLPPKEVLVQTVEMGLEDRARYSNLLRAAQETI-------GGMIEDGTLF 554

Query: 845  KQWKFRSTTIRNLRLSCCVAGHIK----------VTDAGEDIQETMDVLVENGLDPLSQE 894
              +      I  LR  CC    +               GE + + + VL   GLD     
Sbjct: 555  GNYAHALEVILRLRQLCCHGALVPRGKNGEEKPVTPPTGEQMAQLLTVLRAGGLDDCCIC 614

Query: 895  YAFIKYNLLNGGNCLRHILCLDCVAMDSE-KCSLPGCGFLYEMQSPEILTRPENPNPKWP 953
               + + ++    C  H+ C  C+A   E K S P C    + +  E++  P + + +  
Sbjct: 615  LGTMFHPVVT--RCA-HVFCRGCIAPALERKRSCPLC--RADCEPGELVEAPPDEDGETG 669

Query: 954  VPQDL-IELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLT 1012
                      P   +       LK DL        KA   K ++FSQF+  I + ++ + 
Sbjct: 670  DGASTGAGAAPPSAKTEALVARLKTDLRARGDGGRKA---KAVVFSQFVTFIDIAQKSVE 726

Query: 1013 VAGIKFAGMYSPMHSSNKIKSLDMFRH---DASCLALLMDGSASLGLDLSFVTRVFLMEP 1069
             AG K   +   + ++ + K +  F+    D+  +  +   +  +G++L+  + V++++P
Sbjct: 727  AAGFKCVRLTGGVSAAGREKCIREFQSPDADSPDVIFVSLKAGGVGINLTAASFVYMLDP 786

Query: 1070 IWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVK 1127
             W+ + E+Q + R HR+G  RP+ V     + +++E+M+E  Q   R R L K   VK
Sbjct: 787  WWNPATEDQAMDRVHRLGQDRPVKVVRFVCKDSIDEKMMELQQ---RKRELAKAAFVK 841



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L+PHQ+ A+ WMLHRE N+  L  P +   + E+    YVN +S    T   P +    G
Sbjct: 203 LYPHQKEALAWMLHRE-NSNAL-PPFW---SHEEKTGMYVNILS-SYKTSVRPQV--CRG 254

Query: 227 GMFCDEPGLGKTITALSLILKTQGTLADP 255
           G+  D+ GLGKT+  ++LI   +   A P
Sbjct: 255 GILADDMGLGKTLNTIALIASNRPGAAPP 283


>gi|296083594|emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 153/576 (26%), Positives = 254/576 (44%), Gaps = 99/576 (17%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            S  TLIV P  L+  WK +++ H +P  + +F+     + +   +  ++DVV+TT+  L+
Sbjct: 654  SGGTLIVCPMALLSQWKDELETHSKPESISIFIHYGGDRTNDPKVISEHDVVLTTYGVLT 713

Query: 673  AEWGRRKKSPMM-QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
            + +   + S +  +V W RV+LDE HT+ SS  L+   Q A +L +  RW LTGTP  N 
Sbjct: 714  SAYKNDENSSIFHRVEWYRVVLDEAHTIKSSKTLS--AQAAFALPSHCRWCLTGTPLQNN 771

Query: 732  PNSQLSHLQPMLKFLHEEA-------YGQNQKAWDGG----------ILRPF------EA 768
                L  L  +L FLH E        Y   QK ++ G          ILRP       + 
Sbjct: 772  ----LEDLYSLLCFLHVEPWCNWAWWYKLIQKPYECGDQRGLRLIKAILRPLMLRRTKDT 827

Query: 769  EMEEGRSRL------LQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYN----- 817
            + +EGR  L      +Q++  C  S  + D         +V F  F E+    +N     
Sbjct: 828  KDKEGRPILVLPPTDIQVIE-CEQSEAEHDFYDALFKRSKVRFDQFVEQGRVLHNYASIL 886

Query: 818  ELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRN-LRLSCC--VAGHIKVTDA-- 872
            EL++ +R+       N P  V S  + +Q+   S   R  L  + C   + H   T A  
Sbjct: 887  ELLLRLRQCC-----NHPFLVMSRGDTQQYADLSKLARKFLENNPCSDTSNHSIPTRAFV 941

Query: 873  ---------GEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSE 923
                     GE+ +    + +E+  DP+    A              H++C +C+ + S 
Sbjct: 942  EEVVGGIRRGENTE--CPICLESADDPVLTPCA--------------HLMCRECL-LSSW 984

Query: 924  KCSLPG-CGFLYEM-QSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYR 981
            +  L G C    ++ +  +++T P     +       I+++ ++++ S  +  L      
Sbjct: 985  RTPLSGLCPICRKLLKKTDLITCPSENRFR-------IDVEKNWKESSKISELLH----- 1032

Query: 982  PNLE--SNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH 1039
              LE  S   + +K I+FSQ+   + ++E  L   GI F      +    + + L  F  
Sbjct: 1033 -CLERISQSRIGEKSIVFSQWTSFLDLLEIPLRRRGIGFLRYDGKVVQKQRERILKEFSE 1091

Query: 1040 DASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLA 1098
                  LLM   A  +GL+L+  + VFLM+P W+ ++EEQ I R HR+G  R + V    
Sbjct: 1092 TEEKTVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQERTVRVRRFI 1151

Query: 1099 MRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            ++ TVEE+M    Q   R +R++   L   E   AR
Sbjct: 1152 VKDTVEERM---QQVQARKQRMITGALTDEEVRTAR 1184



 Score = 45.8 bits (107), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYI-------DLATEDGFYFYVNTVSGDIATGTAP 219
           L P+Q+ A+ WM   E  ++  + P  +        +  E     YVN  SG+  T    
Sbjct: 560 LRPYQKQALYWMSELEKGSDAEQAPKTLHPCWAAYQICDERASAIYVNIFSGEATTQLPT 619

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLILKTQG 250
            +    GG+  D  GLGKT+  ++LIL   G
Sbjct: 620 AIHMARGGILADAMGLGKTVMTIALILARPG 650


>gi|380093954|emb|CCC08171.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 564

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 232/515 (45%), Gaps = 75/515 (14%)

Query: 613  SRATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            +RATL+VVPS  L+D+WK +I++H+    LH+ V+   +KP       D D+V+TT++ L
Sbjct: 74   TRATLVVVPSRQLIDNWKFEIERHMCEA-LHVTVFHGEQKPQGCKPLIDTDLVLTTYSTL 132

Query: 672  SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
            ++++  +K   + ++ W RV+LDE H + +S   T+  + A +L  S RW LTGTP  N 
Sbjct: 133  ASDY--KKSGLLHKMEWYRVVLDEAHEIRNSS--THYFRAASTLNTSRRWCLTGTPIQN- 187

Query: 732  PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR-CMISARK 790
               +L  L  +  FL    Y   + ++   IL P  +        L   L R C+   R+
Sbjct: 188  ---KLEDLSSLADFLRLPPYSA-KNSFRKYILEPLSSGGMCDSQPLRAYLRRYCL---RR 240

Query: 791  TD-LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKF 849
            TD    +P       +   +++    Y                      +++L+  +W  
Sbjct: 241  TDKCLDLPPSTATTIYQTLSDQEQKLY----------------------DAILSRAKWAL 278

Query: 850  RSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL 909
                  N +      G +K+ +        M ++  +G   LS  +AF+ Y  L   +  
Sbjct: 279  DDIVSGNDK------GALKLYNVLFTATLKMRMVCNHG--TLSPPWAFMGY--LAPQDRE 328

Query: 910  RHILCLDCVAMDSEKCS----LPGCGFLYEMQSPEILTRPENPNPKWPVPQ---DLIELQ 962
                C  C ++D E C      P C   +   SP +     +PNP   +     D I+L 
Sbjct: 329  IDASCERCSSLD-EGCEDIQFCPNCRRPFRANSPSV--SAGSPNPTCWLGDGIIDAIDLH 385

Query: 963  PSYRQWSNTNTFLKQDLYRPNLESNK------ALPDKVIIFSQFLEHIHVIEQQLTVAGI 1016
             S          L+ DL+   L++ +          K +IFSQ++  ++ +      AG+
Sbjct: 386  GS----------LQTDLFSTKLKAVRKQVLEAGAGTKHLIFSQWIPTLYGLVHIFRDAGV 435

Query: 1017 KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSM 1075
                ++    +  + + +  F+ D+    L+M  G+ ++GL+L+  + V ++EP W+ S+
Sbjct: 436  STLLIHGKTSTLERTRLIKTFQEDSQASVLIMSVGTGAVGLNLTAASHVHVVEPHWNPSV 495

Query: 1076 EEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            E Q I+RA RMG  + + V    M+GTVEE ++  
Sbjct: 496  EAQAIARAIRMGQMKNVIVTRYIMKGTVEESIVAL 530


>gi|315048349|ref|XP_003173549.1| DNA repair protein RAD5 [Arthroderma gypseum CBS 118893]
 gi|311341516|gb|EFR00719.1| DNA repair protein RAD5 [Arthroderma gypseum CBS 118893]
          Length = 922

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 231/539 (42%), Gaps = 71/539 (13%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ TLI+ P  ++ +W+ QI  H+     L +  +    K  A +L+  YDVVITT+  L
Sbjct: 385  SKTTLIISPLGVMSNWRDQITAHIHEEHALRVLTYHGSGKKEAANLS-QYDVVITTYGAL 443

Query: 672  SAEWGR---------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            ++E+G+         + K  +  + W RV+LDEGHT+ +    T   + A  L A +RW 
Sbjct: 444  ASEYGQLLTATGKLAKTKKGIFSLRWRRVVLDEGHTIRTP--KTKAARAACMLEADSRWS 501

Query: 723  LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
            LTGTP  N     L  L    KF+      ++   +   ++RP  A  +E  S LLQ L 
Sbjct: 502  LTGTPIVNN----LKDLYSQGKFIRLSGGLEDLPVFHSALIRPLNAG-DENASLLLQALM 556

Query: 783  RCMISARKTDLQTIPL-------CIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDP 835
              +   R+ D+  + L        I  V FL   +E    +      V  +    D    
Sbjct: 557  ATICLRRRKDMSFVNLRLPPMESHILHVKFLPHEKEKYEMFEAEAKGVFMDFQSHDKGKK 616

Query: 836  ---SHV-ESLLNPKQ----WKFRSTTIRNL-------RLSCCVAGHIKVTDAGEDIQETM 880
               SHV E LL  +Q    WK     ++ L       ++     G+IK       +Q  +
Sbjct: 617  TTYSHVLEVLLRLRQVCNHWKLCHDRVKGLMDLLEKDKVVKLTPGNIKA------LQAVL 670

Query: 881  DVLVENGLDPLSQEYAFIKYNLLNGG--NCLRHILCLDCVAMDSE---KCSLPGCGFLYE 935
             + +E      SQE   I    LN        H     C+    E   KC  P C     
Sbjct: 671  QLRIE------SQEECSICLESLNNPVITPCAHAFDYSCIEQTIELQHKC--PLC----- 717

Query: 936  MQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVI 995
                EI       +P   + +D  E+       S++++   Q L +      +A   K +
Sbjct: 718  --RAEIKDCSALVSPAAELGEDSNEIDVE----SDSSSSKIQALIKILTAKGQAAGTKTV 771

Query: 996  IFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASL 1054
            +FSQ+   + +IE QL +  IKFA +   M+SS +  ++    HD  C  +L      S+
Sbjct: 772  VFSQWTSFLDLIEPQLALNNIKFARIDGKMNSSKRDAAMSKLTHDPECSVMLASLNVCSV 831

Query: 1055 GLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
            GL+L    +V L +  W  ++E+Q + R +R+G  R   +  L M  ++E+++L+  ++
Sbjct: 832  GLNLVAANQVILADSWWAPAIEDQAVDRVYRLGQQRATTIWRLVMENSIEDRVLDIQKE 890


>gi|302658647|ref|XP_003021025.1| hypothetical protein TRV_04890 [Trichophyton verrucosum HKI 0517]
 gi|291184900|gb|EFE40407.1| hypothetical protein TRV_04890 [Trichophyton verrucosum HKI 0517]
          Length = 921

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 236/534 (44%), Gaps = 61/534 (11%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ATLI+ P  ++ +W+ QI  H+ +   L +  +    K  A +L+  YDVVITT+  L
Sbjct: 384  SKATLIISPLGVMSNWRDQIAAHIHKEHALRVLTYHGSGKKEAANLS-QYDVVITTYGAL 442

Query: 672  SAEWGR---------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            ++E+G+         + K  +  V W RV+LDEGHT+ +    T     A  L A +RW 
Sbjct: 443  ASEYGQLLGATGKFAKTKRGLFSVRWRRVVLDEGHTIRTP--KTKAACAACMLEADSRWS 500

Query: 723  LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
            LTGTP  N     L  L    KF+      ++   +   ++RP  A  +E  S LLQ L 
Sbjct: 501  LTGTPIVNN----LKDLYSQGKFIRLSGGLEDLPVFHSALIRPRNAG-DENASLLLQALM 555

Query: 783  RCMISARKTDLQTIPLCI----KEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDP--- 835
              +   R+ D+  + L +      +  + F       Y E+     + + M   ++    
Sbjct: 556  ATICLRRRKDMSFVNLRLPPMESHILHVKFLPHEKEKY-EMFEAEAKGVFMDFQSNKKGK 614

Query: 836  ----SHV-ESLLNPKQ----WKFRSTTIRNLRLSCCVAGHIKVT-DAGEDIQETMDVLVE 885
                SHV E LL  +Q    WK     ++ L         +K+T +  + +Q  + + +E
Sbjct: 615  KTTYSHVLEVLLRLRQVCNHWKLCHDRVKGLMELLEKDKVVKLTPENVKALQAVLQLRIE 674

Query: 886  NGLDPLSQEYAFIKYNLLNGG--NCLRHILCLDCVAMDSE---KCSLPGCGFLYEMQSPE 940
                  SQE   I    L+        H     C+    E   KC  P C         E
Sbjct: 675  ------SQEECSICLESLDNPVITPCAHAFDYSCIEQTIELQHKC--PLC-------RAE 719

Query: 941  ILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQF 1000
            I    E  +P   + +D  ++       S++++   Q L +      +A   K ++FSQ+
Sbjct: 720  IKDCSELVSPAAELGEDCNQIDVE----SDSSSSKIQALIKILTAKGQAAGTKTVVFSQW 775

Query: 1001 LEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLS 1059
               + +IE  L +  I FA +   M+S+ +  ++  F  D+ C  +L      S+GL+L 
Sbjct: 776  TSFLDLIEPHLVLYNINFARIDGKMNSAQRDAAMSKFSRDSECTVMLASLNVCSVGLNLV 835

Query: 1060 FVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
               +V L +  W  ++E+Q + R +R+G TRP  +  L M  ++E+++L+  ++
Sbjct: 836  AANQVVLADSWWAPAIEDQAVDRVYRLGQTRPTTIWRLVMENSIEDRVLDIQKE 889



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 26/119 (21%)

Query: 161 PCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYF-------YVNTVSGDI 213
           P +  +L P+Q+  + WML RE        P      ++D           Y+N ++ + 
Sbjct: 291 PQLSTELLPYQRQGLAWMLDRE-------SPSLPKEGSDDIVQLWKRVGKRYMN-IATNY 342

Query: 214 ATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL---------KTQGTLADPPDGVKIIW 263
           ++ TAP +    GG+  D+ GLGKTI  +SLIL          ++ TL   P GV   W
Sbjct: 343 SSSTAPPLAS--GGILADDMGLGKTIQVISLILANATPKTPKSSKATLIISPLGVMSNW 399


>gi|451993943|gb|EMD86415.1| hypothetical protein COCHEDRAFT_1034850 [Cochliobolus heterostrophus
            C5]
          Length = 881

 Score =  127 bits (319), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 137/568 (24%), Positives = 247/568 (43%), Gaps = 73/568 (12%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            +TLIVVP  L   W++Q++ H+  G+L  F+    ++    S     D+V TT+  +  E
Sbjct: 347  STLIVVPLSLFSVWESQLKSHLHDGKLTWFMHHGRQRFKLKSKEVLPDIVFTTYQTIERE 406

Query: 675  WGRRKK--SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            +  R +  S ++  +W RV+LDE HT+ +  + T+  Q   +L A++RW ++GTP  N+ 
Sbjct: 407  YRNRAQGSSSLLSHYWRRVILDEAHTIRN--HNTSTAQAITALQATSRWAVSGTPIQNS- 463

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L     + KFLH   Y  +   +D  +   +  +  E  +   + L  C++  R   
Sbjct: 464  ---LLDFYGLFKFLHFSPY-DDPSVFDDDVTNLWRVKPAEEAAEAFKKLLSCVMIRRTKA 519

Query: 793  LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRST 852
            +  +P    ++  + F+ E    Y ++   V   + M D    S  ++ +    W     
Sbjct: 520  ILDLPSRDDKLIRVPFSHEEEKHYRQIEQPV---VDMLDRATESGCQTNV---PWMTAIQ 573

Query: 853  TIRNLRLSCCVAG-------HIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNG 905
             I  LRL C +         H+    + ++  + M+     G +  +Q    ++ ++   
Sbjct: 574  QINKLRLICNLGTSTLSQSCHLPQPGSIDERTDLMNARYLMGGELCAQCLQPVEASV--S 631

Query: 906  GNCLR-----HILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNP--------KW 952
            G+ LR     H+    C      +CS      L   QSP+     E P P          
Sbjct: 632  GDGLRDGTQPHVYLSACSIFYCAECSA-----LLRYQSPDPCECTEQPRPCQIRPLASFL 686

Query: 953  PVPQ--DLIELQPSYRQWSNTN-------TFLKQDLYRPNLESNKALPDKVIIFSQFLEH 1003
            P P+   + +L P   +W +TN       T + Q    PN        +K ++FS +   
Sbjct: 687  PTPRLTPVGDLSPLPMEWDHTNDISSKVWTLVSQIRSCPN--------EKHVVFSSWTSS 738

Query: 1004 IHVIEQQL------TVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGL 1056
            + ++E+ L       +  ++  G     + S+ I+ L    H+ S   +L+     +  L
Sbjct: 739  LDMVEKALRCDPNHIIQSVRIDGKVQLKNRSHAIQQL---HHNPSIRVILITIACGACSL 795

Query: 1057 DLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            DL+  +R  L+EP W+ S+E+Q ++R HR+G TRP+      M  + EEQ+L+ +QD   
Sbjct: 796  DLTAASRAHLLEPQWNPSLEDQALARIHRLGQTRPVTTIRYVMEDSFEEQILK-VQDR-- 852

Query: 1117 CRRLLKEELVKPEREGARSHRTLHDFAE 1144
             ++LL   L+          R LH+  E
Sbjct: 853  -KKLLATTLLSNGSSLENLRRLLHERKE 879


>gi|46126713|ref|XP_387910.1| hypothetical protein FG07734.1 [Gibberella zeae PH-1]
          Length = 918

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 141/589 (23%), Positives = 253/589 (42%), Gaps = 88/589 (14%)

Query: 590  LAFDLAALRLALCEPLDSVRL--YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWT 647
            +A D+   R  +C P+D +    +   ATL++VP  ++  W+ QI+ HV  G LH   + 
Sbjct: 349  VAMDMEPGR-EMCAPIDDIPTDKHAVAATLVIVPPPILGTWEQQIEDHVNEGALHYRRYH 407

Query: 648  DHKKPSAHSLAWDYDVVITTFNRLSAEWGR---RKKSPMMQVHWLRVMLDEGHTLGSSLN 704
               + +   L    ++V+TT++ ++AEW R   R++S +  V W R++LDEGH +    N
Sbjct: 408  GKLRLALEELDT-VNIVLTTYHTVAAEWKRDGGRRESLLFSVRWKRIVLDEGHFIR---N 463

Query: 705  LTNKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGIL 763
              +K+ +AI +L   +RW++TGTP  N    +L  L  +LKF+    Y  + + +D  I 
Sbjct: 464  GNSKMAVAICALEGISRWVVTGTPIQN----RLGDLASLLKFIRAHPY-TDPRRFDADIS 518

Query: 764  RPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNEL--VV 821
              +++  +E   R L+ L  C++  R      +P     V  ++F+ E    Y  +    
Sbjct: 519  GLWKSGEDEDAVRRLKRLSACLLLRRAKSTINLPARQDVVYTVDFSAEERVAYERIKQQT 578

Query: 822  TVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCV-----AGHIKVTDAGEDI 876
             VR +  +            +N  Q       I +LRL   +     + H KV+    + 
Sbjct: 579  IVRIDEALGQETGTRKSRGYVNVLQ------QIESLRLFSNLGLYYDSRHEKVSTQETEA 632

Query: 877  QETMDV------------------------LVENGLDPLSQEYAFIKYNLLNGGNCLRHI 912
            +E  ++                        L +  LD +S +    +Y      +CL++I
Sbjct: 633  EEWNEMAQKAFNSQRVMASITCFQCASAFGLADTLLDDMSTKAGTAQYT-----SCLKYI 687

Query: 913  LCLDCVAMDSEKCSLPGCGFLYEMQSPEI------LTRPENPNPKWPVPQDLIELQPSYR 966
             C DCV    +      CG     QS  +      L   ++P P            P  R
Sbjct: 688  -CSDCVDRLLDLGQTLPCGHTPPCQSAPVSTSNIALEEIDDPAP------------PQLR 734

Query: 967  QWSNTNTFLKQDLYRPNLESNKALP--DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSP 1024
                T         R  ++  K  P   K ++FS +   + +++  L   GI+       
Sbjct: 735  ----TAAVAPPSKIRSLVDDIKLSPPETKCVVFSTWRLTLDLVKGVLDQEGIQSIRFDGK 790

Query: 1025 MHSSNKIKSLDMFRHDASC-LALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRA 1083
            +   ++   +  F  D +  + LL     ++GL L+   R +LMEP W+ ++EEQ ++R 
Sbjct: 791  VPQKDRQSVVKRFESDPNIRIMLLTLTCGAVGLTLTAACRAYLMEPHWNPTLEEQALARI 850

Query: 1084 HRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREG 1132
            HR+G T+ +    L +R + EEQ++    +    ++ L   L+ P+  G
Sbjct: 851  HRLGQTKNVTTIRLYIRDSFEEQVM----NVQESKKQLAGVLLSPQDSG 895


>gi|154270293|ref|XP_001536002.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150410016|gb|EDN05404.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 884

 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 135/550 (24%), Positives = 233/550 (42%), Gaps = 82/550 (14%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ TL++ P  ++ +W+ QI  H+   Q L + ++    K  A +L   Y VVITT+  L
Sbjct: 349  SKTTLVISPLGVMSNWRDQISHHIHKDQALRVLIYHGVGKKEAKNLN-TYHVVITTYGAL 407

Query: 672  SAEWGRRKKSP--------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
            ++E+   +  P        +  + W R++LDEGHT+ +    T   + A  L A +RW L
Sbjct: 408  ASEYALIENKPLNPKPSEGLFSLRWRRIVLDEGHTIRNP--RTRGARAACRLEADSRWSL 465

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTP  N     L  L   +K+L      ++   ++  ++RP     E   + LLQ L  
Sbjct: 466  TGTPIINN----LKDLYSQIKYLRISGGLEDLAVFNSAVIRPL-TTCEPNANLLLQALMG 520

Query: 784  CMISARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL--MADWNDPSH 837
             +   RK ++  I    P     V  + F       Y+ L    +  +L   A+ N+   
Sbjct: 521  TICLRRKKEMNFINLRLPPLSSHVLRVKFLPHEQEKYDMLQAEAKGVLLDYHANANNKKG 580

Query: 838  -------VESLLNPKQ----WKFRSTTIRNL-------RLSCCVAGHIKVTDAGEDIQET 879
                   +E LL  +Q    WK     I NL       ++      +IK   A   ++  
Sbjct: 581  GATYSVLLEVLLRMRQVCNHWKLCQNRINNLMEMLEEHKVVALTPQNIKALQALLQLKIE 640

Query: 880  MDVLVENGLDPLSQ----------EYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPG 929
               +    LD L Q          +Y+ I+  +       R   C  C A   +  SL  
Sbjct: 641  SQEICAICLDTLQQPVITPCAHTFDYSCIEQAI------ERQHKCPLCRAEIEDCKSLVA 694

Query: 930  CGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKA 989
                +   + EI   PE  + K    Q L+++  +  Q  NT                  
Sbjct: 695  PSADFGEDTNEIDIDPETTSSKI---QALLKILTAKGQAPNT------------------ 733

Query: 990  LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
               K ++FSQ++  + ++E QL   GI FA +   M S+ +  +++   +D++C  LL  
Sbjct: 734  ---KTVVFSQWVSFLDIVEPQLVRNGITFARIDGKMSSAKRDAAMNALSNDSNCTVLLAS 790

Query: 1050 -GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
                S+GL+L    +V L +  W  ++E+Q + R +R+G  RP  +  L M  ++E+++L
Sbjct: 791  LNVCSVGLNLVAANQVILADSWWAPAIEDQAVDRVYRLGQKRPTTIWRLVMENSIEDRVL 850

Query: 1109 EFLQDTDRCR 1118
            +  ++  R R
Sbjct: 851  DKQKEKHRKR 860


>gi|239610082|gb|EEQ87069.1| SNF2 family helicase [Ajellomyces dermatitidis ER-3]
          Length = 931

 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 228/540 (42%), Gaps = 82/540 (15%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ TL++ P  ++ +W+ QI QH+   Q L + ++    K  A +L  +YDVVITT+  L
Sbjct: 393  SKTTLVISPLGVMSNWRDQIAQHIHNDQALRVLIYHGVGKKEAKNLN-NYDVVITTYGAL 451

Query: 672  SAEWG--------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
            ++E+          +    +  + W RV+LDEGHT+ +    T   + A  L A +RW L
Sbjct: 452  ASEYAPIENKLPNSKPSQGLFSLRWRRVVLDEGHTIRNP--RTRGARAACKLEADSRWSL 509

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTP  N     L  L   +KFL      ++   ++  ++RP  A  +   + LLQ L  
Sbjct: 510  TGTPIVNN----LKDLYSQVKFLGISGGLEDLTVFNSAVIRPLTA-CDPNANLLLQALMG 564

Query: 784  CMISARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL--MADWNDPSH 837
             +   RK D+  I    P     V  + F       Y+      +  +L   A+ N+ + 
Sbjct: 565  TICLRRKKDMNFINLRLPPLSSHVLHVKFLPHEQEKYDMFQAEAKGVLLDYQANANNKNG 624

Query: 838  -------VESLLNPKQ----WKFRSTTIRNL-------RLSCCVAGHIKVTDAGEDIQET 879
                   +E LL  +Q    WK     I NL       ++      +IK   A   ++  
Sbjct: 625  GATYSVLLEVLLRMRQVCNHWKLCQNRINNLMELLEQHKVVALTPQNIKALQALLQLKIE 684

Query: 880  MDVLVENGLDPLSQ----------EYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPG 929
               +    LD L Q          +Y+ I+  +       R   C  C A   +  SL  
Sbjct: 685  SQEMCAICLDTLRQPVITPCAHTFDYSCIEQAI------ERQHKCPLCRAEIEDCKSLVA 738

Query: 930  CGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKA 989
                    + EI   PE  + K    + L+++  +  Q  NT T                
Sbjct: 739  PAADLGEDTNEIDIDPETTSSKI---EALLKILTAKGQAPNTKT---------------- 779

Query: 990  LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
                 ++FSQ++  + ++E QL   GI FA +   M S+ +  ++    +D +C  LL  
Sbjct: 780  -----VVFSQWVSFLDIVEPQLARNGITFARIDGRMSSAKRDAAMKALSNDPNCTVLLAS 834

Query: 1050 -GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
                S+GL+L    +V L +  W  ++E+Q + R +R+G  RP  +  L M  ++E+++L
Sbjct: 835  LNVCSVGLNLVAANQVILADSWWAPAIEDQAVDRVYRLGQKRPTTIWRLVMENSIEDRVL 894



 Score = 42.0 bits (97), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 24/126 (19%)

Query: 153 RCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFY------V 206
           R   AS    +  +L P+Q+  + WML +E        P +    + D    +       
Sbjct: 292 RMPMASCPKALSTELLPYQRQGLAWMLDKE-------SPKFPSKGSRDVVQLWKRSGNMF 344

Query: 207 NTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL---------KTQGTLADPPD 257
             ++ +  T T P +    GG+  D+ GLGKT+  +SLIL          ++ TL   P 
Sbjct: 345 TNIATNYTTATEPPL--ASGGILADDMGLGKTVQIISLILANSAQKTKESSKTTLVISPL 402

Query: 258 GVKIIW 263
           GV   W
Sbjct: 403 GVMSNW 408


>gi|327351006|gb|EGE79863.1| SNF2 family helicase [Ajellomyces dermatitidis ATCC 18188]
          Length = 931

 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 228/540 (42%), Gaps = 82/540 (15%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ TL++ P  ++ +W+ QI QH+   Q L + ++    K  A +L  +YDVVITT+  L
Sbjct: 393  SKTTLVISPLGVMSNWRDQIAQHIHNDQALRVLIYHGVGKKEAKNLN-NYDVVITTYGAL 451

Query: 672  SAEWG--------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
            ++E+          +    +  + W RV+LDEGHT+ +    T   + A  L A +RW L
Sbjct: 452  ASEYAPIENKLPNSKPSQGLFSLRWRRVVLDEGHTIRNP--RTRGARAACKLEADSRWSL 509

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTP  N     L  L   +KFL      ++   ++  ++RP  A  +   + LLQ L  
Sbjct: 510  TGTPIVNN----LKDLYSQVKFLGISGGLEDLTVFNSAVIRPLTA-CDPNANLLLQALMG 564

Query: 784  CMISARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL--MADWNDPSH 837
             +   RK D+  I    P     V  + F       Y+      +  +L   A+ N+ + 
Sbjct: 565  TICLRRKKDMNFINLRLPPLSSHVLHVKFLPHEQEKYDMFQAEAKGVLLDYQANANNKNG 624

Query: 838  -------VESLLNPKQ----WKFRSTTIRNL-------RLSCCVAGHIKVTDAGEDIQET 879
                   +E LL  +Q    WK     I NL       ++      +IK   A   ++  
Sbjct: 625  GATYSVLLEVLLRMRQVCNHWKLCQNRINNLMELLEQHKVVALTPQNIKALQALLQLKIE 684

Query: 880  MDVLVENGLDPLSQ----------EYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPG 929
               +    LD L Q          +Y+ I+  +       R   C  C A   +  SL  
Sbjct: 685  SQEMCAICLDTLRQPVITPCAHTFDYSCIEQAI------ERQHKCPLCRAEIEDCKSLVA 738

Query: 930  CGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKA 989
                    + EI   PE  + K    + L+++  +  Q  NT T                
Sbjct: 739  PAADLGEDTNEIDIDPETTSSKI---EALLKILTAKGQAPNTKT---------------- 779

Query: 990  LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
                 ++FSQ++  + ++E QL   GI FA +   M S+ +  ++    +D +C  LL  
Sbjct: 780  -----VVFSQWVSFLDIVEPQLARNGITFARIDGRMSSAKRDAAMKALSNDPNCTVLLAS 834

Query: 1050 -GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
                S+GL+L    +V L +  W  ++E+Q + R +R+G  RP  +  L M  ++E+++L
Sbjct: 835  LNVCSVGLNLVAANQVILADSWWAPAIEDQAVDRVYRLGQKRPTTIWRLVMENSIEDRVL 894



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 24/126 (19%)

Query: 153 RCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFY------V 206
           R   AS    +  +L P+Q+  + WML +E        P +    + D    +       
Sbjct: 292 RMPMASCPKALSTELLPYQRQGLAWMLDKE-------SPKFPSKGSRDVVQLWKRSGNMF 344

Query: 207 NTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL---------KTQGTLADPPD 257
             ++ +  T T P +    GG+  D+ GLGKT+  +SLIL          ++ TL   P 
Sbjct: 345 TNIATNYTTATEPPL--ASGGILADDMGLGKTVQIISLILANSAPKTKESSKTTLVISPL 402

Query: 258 GVKIIW 263
           GV   W
Sbjct: 403 GVMSNW 408


>gi|320034534|gb|EFW16478.1| helicase SWR1 [Coccidioides posadasii str. Silveira]
          Length = 957

 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 242/559 (43%), Gaps = 70/559 (12%)

Query: 585  KTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVR-PGQLHL 643
            KT+  ++  LA L++A  +         SR TLI+ P  ++ +W+ QI  HV+    L +
Sbjct: 401  KTIQTISLILADLKVASAQS--------SRTTLIISPLGVMSNWRDQIATHVKQENALKV 452

Query: 644  FVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGR---------RKKSPMMQVHWLRVMLD 694
             V+    K  A  L   YDVVITT+  L+ E+G+         + K  +  + W RV+LD
Sbjct: 453  LVYHGTGKKEAEKLD-QYDVVITTYGALAMEFGQVDGKSPKAPKPKQGLFSMRWRRVVLD 511

Query: 695  EGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQN 754
            EGHT+ S    T   + A +L A +RW LTGTP  N     L  L   L++L      ++
Sbjct: 512  EGHTIRSP--RTKGARAACALEADSRWSLTGTPIINN----LKDLYSQLRYLRISGGLED 565

Query: 755  QKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTI----PLCIKEVTFLNFTE 810
               ++  ++RP + E +   + +LQ L   +   RK ++  I    P     +  + F++
Sbjct: 566  FSVFNSALIRPLKDE-DPNANLVLQALMATICLRRKKEMGFINLRLPPMQSHILHVKFSQ 624

Query: 811  EHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVT 870
                 Y+      +  ++       S+V        +      I  LR  C    H K+ 
Sbjct: 625  HEKEKYDMFQAEAKGVLMEYSNGKKSNV-------TYSHLLEVILRLRQVC---NHWKLC 674

Query: 871  DAGEDIQETMDVLVENGLDPLSQE-----YAFIKYNLLNGGNCLRHILCLDCVAMDSEKC 925
             +   I   MD+L +  +  L+ E      A ++ N+ +   C    +CLD  ++D    
Sbjct: 675  QS--RINSLMDLLEKEKIVSLTPENVKALQALLQLNIESQETC---PICLD--SLDQPVI 727

Query: 926  SLPGCGFLY-------EMQSPEILTRPENPN------PKWPVPQDLIELQPSYRQWSNTN 972
            +     F Y       E Q    L R E  +      P   + +D  ++     + S+  
Sbjct: 728  TACAHTFDYSCIEQVIERQHKCPLCRAELADTSNLVHPAVALGEDDSKVDVDPEESSSK- 786

Query: 973  TFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIK 1032
                Q L +      +A   K ++FSQ+   + +IE QL    I F  +     S+ +  
Sbjct: 787  ---IQALIKILTAQGQAPGSKTVVFSQWTSFLDLIEPQLVKHNITFTRIDGKRSSTKRDV 843

Query: 1033 SLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRP 1091
            ++    +D +C  +L      S+GL+L    +V L +  W  ++E+Q + R +R+G  RP
Sbjct: 844  AMATLTNDPNCTVMLASLNVCSVGLNLVAANQVILTDSWWAPAIEDQAVDRVYRLGQKRP 903

Query: 1092 IHVETLAMRGTVEEQMLEF 1110
              V  L M G++E+++L+ 
Sbjct: 904  TTVWRLVMEGSIEDRVLDI 922



 Score = 43.1 bits (100), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 19/141 (13%)

Query: 114 EDNSCSTGISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPC-MKLKLFPHQQ 172
           E N     I DI    V+     +  + + +  A  + L  +  +  P  +  +L P+Q+
Sbjct: 281 EKNKNQESIDDIIGQSVVFNPREMSQV-VEKFGADEKELAAMPMAECPASLSTELLPYQR 339

Query: 173 AAVEWMLHREWNAEVLRHPLYIDLATEDGFYF-------YVNTVSGDIATGTAPTMRDFH 225
             + WML +E        P    +  ED           Y N  +G + T  AP +    
Sbjct: 340 QGLAWMLDKE-------SPQLPGVGREDVVQLWKRQAQAYKNIATGYV-TNQAPPL--AS 389

Query: 226 GGMFCDEPGLGKTITALSLIL 246
           GG+  D+ GLGKTI  +SLIL
Sbjct: 390 GGILADDMGLGKTIQTISLIL 410


>gi|303318791|ref|XP_003069395.1| SNF2 family N-terminal domain containing protein [Coccidioides
            posadasii C735 delta SOWgp]
 gi|240109081|gb|EER27250.1| SNF2 family N-terminal domain containing protein [Coccidioides
            posadasii C735 delta SOWgp]
          Length = 956

 Score =  126 bits (316), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 242/559 (43%), Gaps = 70/559 (12%)

Query: 585  KTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVR-PGQLHL 643
            KT+  ++  LA L++A  +         SR TLI+ P  ++ +W+ QI  HV+    L +
Sbjct: 400  KTIQTISLILADLKVASAQS--------SRTTLIISPLGVMSNWRDQIATHVKQENALKV 451

Query: 644  FVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGR---------RKKSPMMQVHWLRVMLD 694
             V+    K  A  L   YDVVITT+  L+ E+G+         + K  +  + W RV+LD
Sbjct: 452  LVYHGTGKKEAEKLD-QYDVVITTYGALAMEFGQVDGKSPKAPKPKQGLFSMRWRRVVLD 510

Query: 695  EGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQN 754
            EGHT+ S    T   + A +L A +RW LTGTP  N     L  L   L++L      ++
Sbjct: 511  EGHTIRSP--RTKGARAACALEADSRWSLTGTPIINN----LKDLYSQLRYLRISGGLED 564

Query: 755  QKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTI----PLCIKEVTFLNFTE 810
               ++  ++RP + E +   + +LQ L   +   RK ++  I    P     +  + F++
Sbjct: 565  FSVFNSALIRPLKDE-DPNANLVLQALMATICLRRKKEMGFINLRLPPMQSHILHVKFSQ 623

Query: 811  EHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVT 870
                 Y+      +  ++       S+V        +      I  LR  C    H K+ 
Sbjct: 624  HEKEKYDMFQAEAKGVLMEYSNGKKSNVT-------YSHLLEVILRLRQVC---NHWKLC 673

Query: 871  DAGEDIQETMDVLVENGLDPLSQE-----YAFIKYNLLNGGNCLRHILCLDCVAMDSEKC 925
             +   I   MD+L +  +  L+ E      A ++ N+ +   C    +CLD  ++D    
Sbjct: 674  QS--RINSLMDLLEKEKIVSLTPENVKALQALLQLNIESQETC---PICLD--SLDQPVI 726

Query: 926  SLPGCGFLY-------EMQSPEILTRPENPN------PKWPVPQDLIELQPSYRQWSNTN 972
            +     F Y       E Q    L R E  +      P   + +D  ++     + S+  
Sbjct: 727  TACAHTFDYSCIEQVIERQHKCPLCRAELADTSNLVHPAVALGEDDSKVDVDPEESSSK- 785

Query: 973  TFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIK 1032
                Q L +      +A   K ++FSQ+   + +IE QL    I F  +     S+ +  
Sbjct: 786  ---IQALIKILTAQGQAPGSKTVVFSQWTSFLDLIEPQLVKHNITFTRIDGKRSSTKRDV 842

Query: 1033 SLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRP 1091
            ++    +D +C  +L      S+GL+L    +V L +  W  ++E+Q + R +R+G  RP
Sbjct: 843  AMATLTNDPNCTVMLASLNVCSVGLNLVAANQVILTDSWWAPAIEDQAVDRVYRLGQKRP 902

Query: 1092 IHVETLAMRGTVEEQMLEF 1110
              V  L M G++E+++L+ 
Sbjct: 903  TTVWRLVMEGSIEDRVLDI 921



 Score = 43.1 bits (100), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 19/141 (13%)

Query: 114 EDNSCSTGISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPC-MKLKLFPHQQ 172
           E N     I DI    V+     +  + + +  A  + L  +  +  P  +  +L P+Q+
Sbjct: 280 EKNKNQESIDDIIGQSVVFNPREMSQV-VEKFGADEKELAAMPMAECPASLSTELLPYQR 338

Query: 173 AAVEWMLHREWNAEVLRHPLYIDLATEDGFYF-------YVNTVSGDIATGTAPTMRDFH 225
             + WML +E        P    +  ED           Y N  +G + T  AP +    
Sbjct: 339 QGLAWMLDKE-------SPQLPGVGREDVVQLWKRQAQAYKNIATGYV-TNQAPPL--AS 388

Query: 226 GGMFCDEPGLGKTITALSLIL 246
           GG+  D+ GLGKTI  +SLIL
Sbjct: 389 GGILADDMGLGKTIQTISLIL 409


>gi|296424248|ref|XP_002841661.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637907|emb|CAZ85852.1| unnamed protein product [Tuber melanosporum]
          Length = 1022

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 135/545 (24%), Positives = 236/545 (43%), Gaps = 69/545 (12%)

Query: 616  TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS--------------AHSLAWDY 661
            TL+V P  L+  W+++ +   +PG L   V+ D +K                 + +   Y
Sbjct: 467  TLVVAPMSLLAQWESEAEVASKPGTLKTLVYYDSQKKQNLQTFCNASNAGNVPNLIITSY 526

Query: 662  DVVITTFNRLSAEWGRR-KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASN 719
             VV++ F ++ A  G+R     +  V +LR++LDE H +    N T+K   A   L+A +
Sbjct: 527  GVVLSEFGQVVASGGKRGAHGGLFSVKFLRIILDEAHHIK---NRTSKSAKACYELSADH 583

Query: 720  RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ 779
            RW+LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE +       ++Q
Sbjct: 584  RWVLTGTPIVN----RLEDLFSLVRFLRVEPWS-NFSFWKTFITVPFEEKDFIRALDVVQ 638

Query: 780  LLHRCMISARKTDLQT------IPLCIK--EVTFLNFTEEHAGTYNELVVTVRRNILMAD 831
             +   ++  R  +++T      +PL  K  E+ ++  ++     Y  +    R ++  + 
Sbjct: 639  TVLEPLVLRRTKEMKTLNGEPLVPLPKKTTEIVYIKLSKAELDVYRHIEARARSDLARS- 697

Query: 832  WNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPL 891
                  +E     K +      +  LR +CC    I+  +    +QE   +    G + L
Sbjct: 698  ------IEMGTVLKSYTNIFAHVLRLRQACCHPILIRKKEI-YSVQENDALPNLYGANAL 750

Query: 892  SQEYAFIKYNLLNG--------------GNCLRHILCLDC----VAMDSEKCSLPGCGFL 933
             +    I+ N+ N                 CL H  C  C    +     K  LP C   
Sbjct: 751  KE----IRDNVENECPMCLSDPIPDQTVTGCL-HAACKGCWVQLIETAKAKQELPKCVKC 805

Query: 934  YEMQSPEIL---TRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNL-ESNKA 989
             E  +   L    R E+P  +   P++         +  N+ +  K ++    L E+ ++
Sbjct: 806  REPINERDLFEVIRNESPAEEVGQPENSQGQADITLRRINSRSSAKVEMLIEKLSETERS 865

Query: 990  LPD-KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM 1048
             P+ K  +FSQF   + +IE++L    IKF      M    + + +  F+ D     LL+
Sbjct: 866  CPERKSCVFSQFTTFLDIIEKELQRRRIKFLRFDGSMSQQKRAEVVSTFKMDQGPNILLL 925

Query: 1049 DGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
               A  +GL+L+  ++VF+M+P W  ++E Q I R HRMG T  + V    + GTVEE++
Sbjct: 926  SLRAGGVGLNLTTASQVFMMDPWWSFAVEAQAIDRVHRMGQTSEVMVYRFVVEGTVEERI 985

Query: 1108 LEFLQ 1112
            +  +Q
Sbjct: 986  VHTIQ 990



 Score = 43.5 bits (101), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 17/98 (17%)

Query: 165 LKLFPHQQAAVEWMLHRE----WNAEVLRHPLYIDLA---TEDGFY----------FYVN 207
           + L  +Q+ A+ W L +E    + A    HPL+ +     TE+             FYVN
Sbjct: 335 MSLRRYQKQALHWFLSKEKSTDYRANESIHPLWEEYEWPNTEEDHKRAIRDLGQDKFYVN 394

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             SG+++       ++  GG+  DE GLGKTI  LSLI
Sbjct: 395 PYSGELSLKFPKQEQNCLGGILADEMGLGKTIEMLSLI 432


>gi|321255221|ref|XP_003193350.1| SWI/SNF related, matrix associated, actin dependent regulator of
            chromatin, subfamily a, member 3 [Cryptococcus gattii
            WM276]
 gi|317459820|gb|ADV21563.1| SWI/SNF related, matrix associated, actin dependent regulator of
            chromatin, subfamily a, member 3, putative [Cryptococcus
            gattii WM276]
          Length = 899

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 147/589 (24%), Positives = 245/589 (41%), Gaps = 100/589 (16%)

Query: 590  LAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH 649
            L   L  + L L    D V   +S++TLIV P  ++ +W+ QI+ HV P QL  + +   
Sbjct: 315  LGKTLTTISLVLATKNDPVGDKVSQSTLIVCPLSVLGNWEKQIRDHVSPSQLTFYTYHGA 374

Query: 650  KKPSAHSLAWDYDVVITTFNRLSAEWG-----------------RRKKSPMMQVHWLRVM 692
             K         YD+V+TT+  ++ E G                  +K  P+  ++W RV+
Sbjct: 375  AKGLTAKKLGGYDIVLTTYQTVAGEDGAVPDIEDTPLAKKPRLSTKKAGPLATINWKRVV 434

Query: 693  LDEGHTLGSSLNLTNKLQMAIS-LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAY 751
             DEGH L    N   K+ +A + L+A  RW+ TGTP  N+PN     L  +L  LH  A 
Sbjct: 435  ADEGHQLK---NPKAKMTVAFANLSAERRWVCTGTPIVNSPND----LGSLLTCLHICAP 487

Query: 752  GQNQKAWDGGILRPFEAEMEEGRSRLLQ------LLHRCMISARKTDLQTIPLCIKEVTF 805
              N + +   +LRP  +  +   S+LLQ      LL R   S        I L   E+ F
Sbjct: 488  LSNPQYFRALLLRPL-SRGDPTASKLLQAVVSQILLRRTKDSKGANGANVIEL--PEIEF 544

Query: 806  ----LNFTEEHAGTYNELVVTVRRNI--LMADWNDPSHVESLLNPKQWKFRSTTIRNLRL 859
                +N  +E    Y E++   +R     +      ++V S+L         T +R L  
Sbjct: 545  FRVPVNLDDETRKVYEEVLEHSKRRFEETLRTGEGAANVLSML---------TRMRQL-- 593

Query: 860  SCCVAGHIKVTDAGEDIQETMDVLVENGLDP-----LSQEY--AFIKYNLLNGGNCLRHI 912
              C++  +      ++I+       +NG  P     LS E   A +K       + +   
Sbjct: 594  --CLSLELVPQSFLDEIRAPPK--FQNGASPTSIGSLSNEAKGALVKKLRQFVEDEIECG 649

Query: 913  LCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPEN--PNPKWPVPQDLIELQPSYRQWSN 970
            +C+D V   ++  ++  CG  + +   E +   +   P  + P+    I   PS      
Sbjct: 650  ICMDEVEF-AKDPAITDCGHPFCLPCIERVITGQGLCPMDRHPIAHGSILRLPS------ 702

Query: 971  TNTFLKQDLYRPNLES---NKALPDKVI-------------IFSQFLEHIHVIEQQLTVA 1014
                  +D+Y P+ ++   N A  D+++             +FSQF   +  +  +L   
Sbjct: 703  -----DEDVYIPSSQARSINSAKIDELVKYLRIFPRNDKTLVFSQFTSFLDCVGVRLEEE 757

Query: 1015 GIKFAGMYSPMHSSNKIKSLDMFRHDASC--------LALLMDGSASLGLDLSFVTRVFL 1066
            GIKF      M    +   +  F+             + L+   S ++GL+L+  + VFL
Sbjct: 758  GIKFVRFDGRMSGKQRTAVIKTFQEPVKGDDDEKTPKVMLISLKSGAVGLNLTAASNVFL 817

Query: 1067 MEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTD 1115
             +P W  ++E Q I RAHRMG  + + V  L    T+E  +L+  +  D
Sbjct: 818  CDPWWQSAIEAQAIDRAHRMGQKKIVRVFQLIAENTIESSVLDIQKRKD 866



 Score = 43.1 bits (100), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 17/93 (18%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSG------DIATGT--- 217
           L PHQ  A+ WM+ RE N ++ + P   D A +  F+     V        ++AT T   
Sbjct: 244 LLPHQSQALHWMITRE-NPQLPKSP--ADPAVQ--FWVKQKGVGNKPDYWLNVATKTPQN 298

Query: 218 -APTMRDFHGGMFCDEPGLGKTITALSLILKTQ 249
            AP +    GG+  D  GLGKT+T +SL+L T+
Sbjct: 299 EAPQL--GRGGIIADGMGLGKTLTTISLVLATK 329


>gi|225557865|gb|EEH06150.1| DNA repair and recombination protein RAD5B [Ajellomyces capsulatus
            G186AR]
          Length = 928

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 132/544 (24%), Positives = 230/544 (42%), Gaps = 88/544 (16%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ TL++ P  ++ +W+ QI  H+   Q L + ++    K  A  L   YDVVITT+  L
Sbjct: 390  SKTTLVISPLGVMSNWRDQISHHIHKDQALRVLIYHGVGKKEAKKLN-TYDVVITTYGAL 448

Query: 672  SAEWG--------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
            ++E+          +    +  + W R++LDEGHT+ +    T   + A  L A +RW L
Sbjct: 449  ASEYALIENKLLNSKPSEGLFSLRWRRIVLDEGHTIRNP--RTRGARAACRLEADSRWSL 506

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTP  N     L  L   +K+L      ++   ++  ++RP     E   S LLQ L  
Sbjct: 507  TGTPIINN----LKDLYSQIKYLRISGGLEDLSVFNSAVIRPL-TTCEPNASLLLQALMG 561

Query: 784  CMISARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL--MADWNDPSH 837
             +   RK ++  I    P     V  + F       Y+ L    +  +L   A+ N+   
Sbjct: 562  TICLRRKKEMNFINLRLPPLSSHVLRVKFLPHEQEKYDMLQAEAKGVLLDYHANANNKKG 621

Query: 838  -------VESLLNPKQ----WKFRSTTIRNL-------RLSCCVAGHIKVTDA----GED 875
                   +E LL  +Q    WK     I NL       ++      +IK   A      +
Sbjct: 622  GATYSVLLEVLLRMRQVCNHWKLCQNRINNLMEMLEEHKVVALTPQNIKALQALLQLKIE 681

Query: 876  IQET----MDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHIL-----CLDCVAMDSEKCS 926
             QE     +D L +  + P +  + +         +C+  ++     C  C A   +  S
Sbjct: 682  SQEICAICLDTLQQPVITPCAHTFDY---------SCIEQVIEHQHKCPLCRAEIEDCKS 732

Query: 927  LPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLES 986
            L      +   + EI    E  + K    Q L+++  +  Q  NT               
Sbjct: 733  LVAPSADFGEDTNEIDIDSETTSSKI---QALLKILKAKGQAPNT--------------- 774

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
                  K ++FSQ++  + ++E QL   GI FA +   M S+ +  +++   +D++C  L
Sbjct: 775  ------KTVVFSQWVSFLDIVESQLVRNGITFARIDGKMSSAKRDAAMNALSNDSNCTVL 828

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            L      S+GL+L    +V L +  W  ++E+Q + R +R+G  RP  +  L M  ++E+
Sbjct: 829  LASLNVCSVGLNLVAANQVILADSWWAPAIEDQAVDRVYRLGQKRPTTIWRLVMENSIED 888

Query: 1106 QMLE 1109
            ++L+
Sbjct: 889  RVLD 892


>gi|159126292|gb|EDP51408.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163]
          Length = 975

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 233/540 (43%), Gaps = 73/540 (13%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ TLI+ P  ++ +W+ QI+ H        + ++    K  A  L  +YDVVIT++  L
Sbjct: 444  SKTTLIIAPVGVMSNWRNQIKDHTHSESTPSVLIYHGTGKKEAAKLD-EYDVVITSYGAL 502

Query: 672  SAEWGRRKKSPMMQ----VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            + E+    K+   Q    +HW RV+LDEGHT+ +          A +L A +RW LTGTP
Sbjct: 503  AVEYDPSAKAAPKQGLFAIHWRRVVLDEGHTIRNP--RAKGALAACNLRADSRWTLTGTP 560

Query: 728  TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
              N+    L  L   ++FL      ++   ++  ++RP   +   GR  LLQ L   +  
Sbjct: 561  IVNS----LKDLYSQIRFLRLTGGLEDMAVFNSVLIRPLTYDDPNGR-LLLQALMSAICL 615

Query: 788  ARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILM------ADWNDPSH 837
             R+ D++ +    P     V  + F       Y ++  +  + +LM            SH
Sbjct: 616  RRRKDMEFVNLRLPALTSRVLRIKFHPHEQEKY-DMFQSEAKGMLMDFKSREKGGTTYSH 674

Query: 838  V-ESLLNPKQ----WKFRSTTIRNLRLSCCVAGHIKVTDAGEDI---QETMDVLVENG-- 887
            V E LL  +Q    W      +    L+  +  H  V    E+I   Q+T+ + +E+   
Sbjct: 675  VLEVLLRMRQVCNHWALCKHRVDA--LAGLLEKHKVVPLTPENIKALQDTLQLRIESQEM 732

Query: 888  ----LDPLSQEYAFIKYNLLNGGNCLRHIL-----CLDCVAMDSEKCSLPGCGF-LYEMQ 937
                LD L Q       +  + G C+  ++     C  C A   +  +L      L E  
Sbjct: 733  CPICLDTLEQPVITACGHSYDRG-CIEQVIERQHKCPLCRANIDDNSTLVAPAVDLGESA 791

Query: 938  SPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIF 997
              ++   P NP+ K    + LI++  +  Q  +T                     K ++F
Sbjct: 792  DEDVDADPNNPSSKI---EALIKILTAQGQAPDT---------------------KTVVF 827

Query: 998  SQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGL 1056
            SQ+   + ++E  L   GI +A +   M S+ +  S   F  D  C  LL   S  S+GL
Sbjct: 828  SQWTSFLTLVEPHLQRHGIGYARIDGSMKSTARDASTYKFSKDPQCKVLLASLSVCSVGL 887

Query: 1057 DLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            +L    +  L +  W  ++E+Q + R +R+G  R   V  L M  T+E+++LE +QDT R
Sbjct: 888  NLVAANQAILADSWWAPAIEDQAVDRVYRLGQKRETTVWRLVMENTIEDRVLE-IQDTKR 946


>gi|70998504|ref|XP_753974.1| SNF2 family helicase [Aspergillus fumigatus Af293]
 gi|66851610|gb|EAL91936.1| SNF2 family helicase, putative [Aspergillus fumigatus Af293]
          Length = 975

 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 233/540 (43%), Gaps = 73/540 (13%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ TLI+ P  ++ +W+ QI+ H        + ++    K  A  L  +YDVVIT++  L
Sbjct: 444  SKTTLIIAPVGVMSNWRNQIKDHTHSESTPSVLIYHGTGKKEAAKLD-EYDVVITSYGAL 502

Query: 672  SAEWGRRKKSPMMQ----VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            + E+    K+   Q    +HW RV+LDEGHT+ +          A +L A +RW LTGTP
Sbjct: 503  AVEYDPSAKAAPKQGLFAIHWHRVVLDEGHTIRNP--RAKGALAACNLRADSRWTLTGTP 560

Query: 728  TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
              N+    L  L   ++FL      ++   ++  ++RP   +   GR  LLQ L   +  
Sbjct: 561  IVNS----LKDLYSQIRFLRLTGGLEDMAVFNSVLIRPLTYDDPNGR-LLLQALMSAICL 615

Query: 788  ARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILM------ADWNDPSH 837
             R+ D++ +    P     V  + F       Y ++  +  + +LM            SH
Sbjct: 616  RRRKDMEFVNLRLPALTSRVLRIKFHPHEQEKY-DMFQSEAKGMLMDFKSREKGGTTYSH 674

Query: 838  V-ESLLNPKQ----WKFRSTTIRNLRLSCCVAGHIKVTDAGEDI---QETMDVLVENG-- 887
            V E LL  +Q    W      +    L+  +  H  V    E+I   Q+T+ + +E+   
Sbjct: 675  VLEVLLRMRQVCNHWALCKHRVDA--LAGLLEKHKVVPLTPENIKALQDTLQLRIESQEM 732

Query: 888  ----LDPLSQEYAFIKYNLLNGGNCLRHIL-----CLDCVAMDSEKCSLPGCGF-LYEMQ 937
                LD L Q       +  + G C+  ++     C  C A   +  +L      L E  
Sbjct: 733  CPICLDTLEQPVITACGHSYDRG-CIEQVIERQHKCPLCRANIDDNSTLVAPAVDLGESA 791

Query: 938  SPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIF 997
              ++   P NP+ K    + LI++  +  Q  +T                     K ++F
Sbjct: 792  DEDVDADPNNPSSKI---EALIKILTAQGQAPDT---------------------KTVVF 827

Query: 998  SQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGL 1056
            SQ+   + ++E  L   GI +A +   M S+ +  S   F  D  C  LL   S  S+GL
Sbjct: 828  SQWTSFLTLVEPHLQRHGIGYARIDGSMKSTARDASTYKFSKDPQCKVLLASLSVCSVGL 887

Query: 1057 DLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            +L    +  L +  W  ++E+Q + R +R+G  R   V  L M  T+E+++LE +QDT R
Sbjct: 888  NLVAANQAILADSWWAPAIEDQAVDRVYRLGQKRETTVWRLVMENTIEDRVLE-IQDTKR 946


>gi|432094348|gb|ELK25928.1| Helicase-like transcription factor, partial [Myotis davidii]
          Length = 518

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 233/519 (44%), Gaps = 66/519 (12%)

Query: 631  QIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWL 689
            Q  QH++    L+ +V+    +    +L    D+V+TT+N L+ ++G +  SP+  + WL
Sbjct: 2    QFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILTHDYGMKGDSPLHSIRWL 61

Query: 690  RVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEE 749
            RV+LDEGH + +      + +  + L A  +W+LTGTP  N+    L  L  +L FL  +
Sbjct: 62   RVILDEGHAIRNP--NAQQTKAVLHLEAERKWVLTGTPIQNS----LKDLWSLLSFLKLK 115

Query: 750  AYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD------LQTIPLCIKEV 803
             +  +++ W   I RP     E G  RL  L+    +   KT       +  +P     +
Sbjct: 116  PF-LDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKVKGKPVLELPERKVFI 174

Query: 804  TFLNFTEEHAGTYNELVVTVRRNILMADWNDPS---HVESLLNPKQWKFRSTTIRNLRLS 860
              +  ++E    Y   V    R+ +   +N+ +   H   +L           +  LR  
Sbjct: 175  QHITLSDEERKIYQS-VKNEGRDTIGRYFNEGTVLAHYADVLG---------LLLRLRQI 224

Query: 861  CCVAGHI--KVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNL-LNGGNCLRHILCLDC 917
            CC A  +   V+ +G    +T + L         Q+    K  L L+ G+     +CLD 
Sbjct: 225  CCHAHLLTNAVSSSGPSGNDTPEEL---------QKKLIRKMKLILSSGSDEECAICLDS 275

Query: 918  VAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQ------DLIELQP-------- 963
            + +      +  C  ++       + + E P+ K P+ +      +L+E  P        
Sbjct: 276  LTVP----VITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHGDNLLECPPEELTCDTE 331

Query: 964  --SYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQFLEHIHVIEQQLTVAGIKFAG 1020
              S  +W++++      L    ++  K  P+ K ++ SQF   + +IE  L  +G  F  
Sbjct: 332  KKSNMEWTSSSKI--NALMHALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTR 389

Query: 1021 MYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEE 1077
            +   M    +++S+  F++  +    + LL   +  +GL+LS  +RVFLM+P W+ + E+
Sbjct: 390  LDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAED 449

Query: 1078 QVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            Q   R HR+G  + + +    ++ +VEE ML+ +Q+T R
Sbjct: 450  QCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNTKR 487


>gi|62320709|dbj|BAD95377.1| RING finger -like protein [Arabidopsis thaliana]
          Length = 258

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/107 (57%), Positives = 78/107 (72%), Gaps = 3/107 (2%)

Query: 1   MSVVHQLQSLVNQKCLKIEARVMRVEIGENGAARAAVLVDIYLPIAAWSGWQFPKSGAIA 60
           +SVV QL +LV  KCLKI  RV++V+ GENG  RA VLVD+YLPI  WSGWQFPKS A A
Sbjct: 132 ISVVQQLHALVANKCLKIICRVVKVDKGENGEERAVVLVDVYLPIELWSGWQFPKSQATA 191

Query: 61  GSLFRHVSCDWEKRKSVLLDGGECFKD--GCDSSIWNISDCHVLDWK 105
            +LF+H+SCDW  R S+ LDG   +++  G   +IW++SDCHV D K
Sbjct: 192 AALFKHLSCDWGLRVSI-LDGKSIWEEANGRIKAIWDLSDCHVFDCK 237


>gi|440637318|gb|ELR07237.1| hypothetical protein GMDG_02464 [Geomyces destructans 20631-21]
          Length = 1142

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 133/561 (23%), Positives = 235/561 (41%), Gaps = 85/561 (15%)

Query: 616  TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP--------------SAHSLAWDY 661
            TL+V P  L+  W+++ +   + G L   V+  ++K               + + +   Y
Sbjct: 565  TLVVAPMSLLAQWQSEAENASKEGTLKSVVYYGNEKAVNLQSLCCATNAASAPNVIITSY 624

Query: 662  DVVITTFNRLSAEWGRR-KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
             VV++ FN+++A  G R     +  +++ RV++DE H + +  + T +      + A +R
Sbjct: 625  GVVLSEFNQVAARNGDRGTHGGLFSLNFFRVIIDEAHHIKNRQSKTAR--ACYEIEAEHR 682

Query: 721  WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
            W+LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE++       ++Q 
Sbjct: 683  WVLTGTPIVN----RLEDLFSLVRFLRVEPWS-NFSFWKTFITVPFESKDFMRALDVVQT 737

Query: 781  LHRCMISARKTDLQT------IPLCIK--EVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
            +   ++  R  D++T      +PL  K  E+  +  +E     Y  +    +R       
Sbjct: 738  VLEPLVLRRTKDMKTPSGEALVPLPPKTIEIVDVELSEAEREVYEHIFFRAKRAFA---- 793

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCC----------VAGHIKVTDAGE-------- 874
               ++VE+    K +      I  LR +CC          VA  ++  +A +        
Sbjct: 794  ---ANVEAGTVMKAYTSIFAQILRLRQTCCHPILVRKQNIVADELEADEAADAVSGLGDD 850

Query: 875  -DIQ--------ETMDVLVENGLD---------------PLSQEYAFIKYNLLNGGNCLR 910
             D+Q        ET D    N                  P+  E   I+  +    +   
Sbjct: 851  MDLQSLIERFTAETDDSADANAFGAHVLEQIRDEADNECPICSEEPMIEQTVTGCWHSAC 910

Query: 911  HILCLDCVAMDSEKCSLPGCGFLYE-MQSPEIL-TRPENPNPKWPVPQDLIELQPSYRQW 968
                LD ++   +K   P C    E + + +I      + +P  P  +  I LQ   R  
Sbjct: 911  KKCLLDYISHQVDKGDAPRCFNCREPLNTRDIFEVVKHDADPDAPDAKPRIALQ---RLG 967

Query: 969  SNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSS 1028
            SN++  +   + +      +    K +IFSQF   + +IE  LT AG+ F  +   M   
Sbjct: 968  SNSSAKITALISQLKALRREHPGTKSVIFSQFTSFLSLIEPALTRAGVAFLRLDGTMAMK 1027

Query: 1029 NKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMG 1087
             +   L  FR       +L+   +A +GL+L+   RV++M+P W  ++E Q I R HRMG
Sbjct: 1028 ARAAVLKSFRDAKGFTVILLSLRAAGVGLNLTMARRVYMMDPWWSYAVEAQAIDRVHRMG 1087

Query: 1088 ATRPIHVETLAMRGTVEEQML 1108
             T  + V+   +R +VEE+ML
Sbjct: 1088 QTGEVEVKRFIVRESVEERML 1108



 Score = 40.8 bits (94), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 18/99 (18%)

Query: 165 LKLFPHQQAAVEWMLHREWNAE-----VLRHPL---YI---------DLATEDGF-YFYV 206
           + L P+Q+ A+ WM+ +E + +     V  HPL   Y+         +L + +G   FY+
Sbjct: 427 MDLRPYQKQALHWMMAKEKDEKAEKKEVSMHPLWEEYVWPVKDMDDQELPSIEGIDNFYL 486

Query: 207 NTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           N  SG+++       +   GG+  DE GLGKTI  +SLI
Sbjct: 487 NPYSGELSVEFPMQEQHCLGGILADEMGLGKTIEMMSLI 525


>gi|389628612|ref|XP_003711959.1| DNA repair protein RAD5 [Magnaporthe oryzae 70-15]
 gi|351644291|gb|EHA52152.1| DNA repair protein RAD5 [Magnaporthe oryzae 70-15]
          Length = 893

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 172/637 (27%), Positives = 266/637 (41%), Gaps = 117/637 (18%)

Query: 524  KALTWLAKLSPDELSEMETTGLASPILGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYY 583
            + L WL K    E           P+ GS    E     K+  A G  R +    T    
Sbjct: 290  QGLAWLVKKENPEF----------PVTGS---DENTQLWKV-DAKGRYRNLATEFTTADA 335

Query: 584  PKTLDNLAFDLAALRLALCEPLDSVRLYLSRA---TLIVVPSYLVDHWKTQIQQHV---- 636
            PK L      + A  + L + L  + L L+     TLIV P  ++ +W  QI+ HV    
Sbjct: 336  PKLLSG---GILADDMGLGKTLQIIGLILTGGPGPTLIVAPMTVMSNWSQQIENHVYEDE 392

Query: 637  RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEG 696
            RP    +++     +         Y VVITT+  +++E     K P+ ++ W RV+LDEG
Sbjct: 393  RPS---VYIHHGPSRLRDSEEVESYGVVITTYGTMTSEGS---KGPLSKIQWRRVVLDEG 446

Query: 697  HTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQK 756
            HT+ +S  LT     A  L A++RW+L+GTP  N     +  L  +LKFL          
Sbjct: 447  HTIRNSDTLTA--LAACELKATSRWVLSGTPIVNN----IRDLYSLLKFLK--------- 491

Query: 757  AWDGGI--LRPFEAEMEEGRS-------RLLQLLHRCMISARKTDLQTIPLCIKEVTF-- 805
               GG+  L  F + +E G S        LLQ L   +   R   ++ + L +   T   
Sbjct: 492  -ITGGLESLEVFRSVIERGLSYGDSRAESLLQALMGDLCLRRNKSMKFVDLKLPPKTHYV 550

Query: 806  --LNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLS--C 861
              + FTE     Y+ L+   +  +L     +P  ++         F S   R LRL   C
Sbjct: 551  HRIAFTEAEQKKYDALLCEAK-GVLNDIRKNPKTIQ------HGGFTSVLERLLRLRQMC 603

Query: 862  C---------------VAGHIKVTDAGED---IQETMDVLVENGLDPLSQEYAFIKYNLL 903
            C               + G   V    E+   ++E + +LVE      SQ+   +  + L
Sbjct: 604  CHWTLCKERVKAVLSILEGQKVVELTPENRQILEEALRLLVE------SQDDCAVCLDTL 657

Query: 904  NG---GNCLRHILCLDCVAMDSE---KCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQD 957
            +     +C +H  C  C+    E   +C  P C    E+   +++   +  N +     D
Sbjct: 658  DDPVITHC-KHAFCRKCIMQVVEVQHRC--PLC--RTELSEDKLVEPAKEDNGRSVQVDD 712

Query: 958  LIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQL----TV 1013
            + E   S    S T+  LK  +    L  N +   KVIIFSQ+   ++VI++QL    T 
Sbjct: 713  MDESAGS----SKTDALLK--ILDGTLLKNSS--SKVIIFSQWTSFLNVIQRQLEEHTTY 764

Query: 1014 AGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDR 1073
               +  G   P+   + ++ L+        LA L  G  S+GL+L     V L +  W  
Sbjct: 765  GYTRIDGTMKPVARDDAMRKLETDPDTRILLASL--GVCSVGLNLVTADTVILADSWWAP 822

Query: 1074 SMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            ++E+Q I R HR+G TRP  V  L M  TVEE++L+ 
Sbjct: 823  AIEDQAIDRVHRLGQTRPTTVWRLVMEDTVEERVLDV 859


>gi|392570758|gb|EIW63930.1| hypothetical protein TRAVEDRAFT_157721 [Trametes versicolor FP-101664
            SS1]
          Length = 917

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 139/558 (24%), Positives = 240/558 (43%), Gaps = 84/558 (15%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD----VVITTFNR 670
            ATLIV P+ L+  W  ++Q+  +P  L + VW    +    + A D D    +V+T++  
Sbjct: 345  ATLIVAPTSLLSQWAEELQRSSKPDTLRVLVWHGQNRLDLDA-AVDTDGATNIVVTSYGI 403

Query: 671  LSAEWGRRKK--SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            L +E  + +K  SP+ +V WLRV+LDE H + S  + + K   A  L A  RW +TGTP 
Sbjct: 404  LVSEHAKHEKQPSPVFEVEWLRVILDEAHHIKSRTSKSAKAVYA--LRARRRWAVTGTPI 461

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N    +L  L  +LKFL    +  N   +   I  PF A  +     ++Q++   ++  
Sbjct: 462  VN----RLEDLYSLLKFLDFTPWS-NHTFFRSFITLPFLAR-DRKAVEVVQIILESVLLR 515

Query: 789  RKTDL------QTIPLCIKEV--TFLNFTEEHAGTYNELVVTVRRNILMADWN-----DP 835
            R+ D+      + + L  KE+  T L F+      Y+ L    +++    +       + 
Sbjct: 516  REKDMLDSDGKKIVELPSKEITTTMLEFSPLERKIYDSLYTDAKKDFENLNAKGLVSRNY 575

Query: 836  SHVESLLNPKQWKFRSTTIR-NLRLSCC---------------VAGHIKVTDAGEDIQET 879
            +H+ ++L     + R   +  NL LS                 V   IK  D G++    
Sbjct: 576  THILAML----MRLRRAVLHPNLVLSSSDGPAPKAPAGSGAIDVNELIKRFDKGDNAAGD 631

Query: 880  MDVLVENGLDPLSQEYAF---IKYNLLNGGNCL---RHILCLDCVAMDSEKC-------S 926
              V  E  L  L QE      I ++++     L    H  C DC+    E+C        
Sbjct: 632  SKVYAEGVLANLGQEENAECPICFDVMETPTILPDCMHQCCKDCIVAFIERCREKGEDGK 691

Query: 927  LPGC--GFLYEMQSPEILTRPENPNPKW----PVPQDLIELQPSYRQWSNTNTFLKQDLY 980
             P C  G + E    EI+    +   K       P   + L+ +  + S     L QDL 
Sbjct: 692  CPTCFRGPVQESDLLEIVRSRNDSGDKAGDPTQAPTQTVTLRRNDFRSSTKLEALVQDLR 751

Query: 981  RPNLESNKALPD-----KVIIFSQ---FLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIK 1032
            R        L D     + ++FSQ   FL+ I ++ ++  +A  +F G       +  + 
Sbjct: 752  R--------LRDQDPCFRAVVFSQFTSFLDLIQIVLEREELAWYRFDGSMDIKKRNGAVS 803

Query: 1033 SLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPI 1092
                   +A  L + +  +  +GL+L+    V++M+  W+ + E Q I R HR+G  +P+
Sbjct: 804  GFKESSREAKVLIVSLK-AGGVGLNLTNANHVYMMDCWWNAATENQAIDRVHRIGQEKPV 862

Query: 1093 HVETLAMRGTVEEQMLEF 1110
            +V+   + GT+E ++L+ 
Sbjct: 863  YVKQFIIAGTIEGRILQI 880


>gi|440470992|gb|ELQ40031.1| DNA repair protein RAD5 [Magnaporthe oryzae Y34]
 gi|440488815|gb|ELQ68510.1| DNA repair protein RAD5 [Magnaporthe oryzae P131]
          Length = 879

 Score =  124 bits (310), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 172/637 (27%), Positives = 266/637 (41%), Gaps = 117/637 (18%)

Query: 524  KALTWLAKLSPDELSEMETTGLASPILGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYY 583
            + L WL K    E           P+ GS    E     K+  A G  R +    T    
Sbjct: 276  QGLAWLVKKENPEF----------PVTGS---DENTQLWKV-DAKGRYRNLATEFTTADA 321

Query: 584  PKTLDNLAFDLAALRLALCEPLDSVRLYLSRA---TLIVVPSYLVDHWKTQIQQHV---- 636
            PK L      + A  + L + L  + L L+     TLIV P  ++ +W  QI+ HV    
Sbjct: 322  PKLLSG---GILADDMGLGKTLQIIGLILTGGPGPTLIVAPMTVMSNWSQQIENHVYEDE 378

Query: 637  RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEG 696
            RP    +++     +         Y VVITT+  +++E     K P+ ++ W RV+LDEG
Sbjct: 379  RPS---VYIHHGPSRLRDSEEVESYGVVITTYGTMTSEGS---KGPLSKIQWRRVVLDEG 432

Query: 697  HTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQK 756
            HT+ +S  LT     A  L A++RW+L+GTP  N     +  L  +LKFL          
Sbjct: 433  HTIRNSDTLTA--LAACELKATSRWVLSGTPIVNN----IRDLYSLLKFLK--------- 477

Query: 757  AWDGGI--LRPFEAEMEEGRS-------RLLQLLHRCMISARKTDLQTIPLCIKEVTF-- 805
               GG+  L  F + +E G S        LLQ L   +   R   ++ + L +   T   
Sbjct: 478  -ITGGLESLEVFRSVIERGLSYGDSRAESLLQALMGDLCLRRNKSMKFVDLKLPPKTHYV 536

Query: 806  --LNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLS--C 861
              + FTE     Y+ L+   +  +L     +P  ++         F S   R LRL   C
Sbjct: 537  HRIAFTEAEQKKYDALLCEAK-GVLNDIRKNPKTIQ------HGGFTSVLERLLRLRQMC 589

Query: 862  C---------------VAGHIKVTDAGED---IQETMDVLVENGLDPLSQEYAFIKYNLL 903
            C               + G   V    E+   ++E + +LVE      SQ+   +  + L
Sbjct: 590  CHWTLCKERVKAVLSILEGQKVVELTPENRQILEEALRLLVE------SQDDCAVCLDTL 643

Query: 904  NG---GNCLRHILCLDCVAMDSE---KCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQD 957
            +     +C +H  C  C+    E   +C  P C    E+   +++   +  N +     D
Sbjct: 644  DDPVITHC-KHAFCRKCIMQVVEVQHRC--PLC--RTELSEDKLVEPAKEDNGRSVQVDD 698

Query: 958  LIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQL----TV 1013
            + E   S    S T+  LK  +    L  N +   KVIIFSQ+   ++VI++QL    T 
Sbjct: 699  MDESAGS----SKTDALLK--ILDGTLLKNSS--SKVIIFSQWTSFLNVIQRQLEEHTTY 750

Query: 1014 AGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDR 1073
               +  G   P+   + ++ L+        LA L  G  S+GL+L     V L +  W  
Sbjct: 751  GYTRIDGTMKPVARDDAMRKLETDPDTRILLASL--GVCSVGLNLVTADTVILADSWWAP 808

Query: 1074 SMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            ++E+Q I R HR+G TRP  V  L M  TVEE++L+ 
Sbjct: 809  AIEDQAIDRVHRLGQTRPTTVWRLVMEDTVEERVLDV 845


>gi|296812409|ref|XP_002846542.1| transcription termination factor 2 [Arthroderma otae CBS 113480]
 gi|238841798|gb|EEQ31460.1| transcription termination factor 2 [Arthroderma otae CBS 113480]
          Length = 1166

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 136/587 (23%), Positives = 251/587 (42%), Gaps = 74/587 (12%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF---- 668
            ++ TL+V P   V +W +QI++H++   L ++V+    +         YD+VITT+    
Sbjct: 587  AKTTLLVSPLSAVGNWVSQIKEHIKDDALSVYVFHGPNRTEDPKELAQYDIVITTYTTVL 646

Query: 669  NRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            + +S +  +RK SP++Q++  R++LDE H +        + Q    L A  RW +TGTP 
Sbjct: 647  SDISGKSSKRKTSPLVQMNMFRIVLDEAHIIRE--QSAAQSQAIFQLNAQRRWSVTGTPI 704

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N    +L  L  +LKFL    Y +  + +   I+ PF+ E     + L  L+    +  
Sbjct: 705  QN----RLEDLGAVLKFLRLSPYDERGR-FAAHIVSPFKCENPNAITNLRVLVDSFTLR- 758

Query: 789  RKTDLQTIPLCIKEVTFLNFTEEHAGTYN--ELVVTVRRNILMADWNDPS---------- 836
            R  D   +P    +   L F+E     ++  +    V  N+++++  + +          
Sbjct: 759  RVKDRVNLPPRHDKTVMLTFSEPEKKLHDFFKKESNVMMNVVVSETREKTSGKMYHIVLK 818

Query: 837  ----------HVESLLNPK-QWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVE 885
                      H + LL+ + + +FR  T  +      +     +T A     E + ++ E
Sbjct: 819  AMMVLRQICAHGKELLDKEDRERFRGLTANDAIDVEALDDDHSMTAASRKAYEMISLMKE 878

Query: 886  NGLDPLSQEYAFIKYNLLNG---GNCL-------RHILCLDCVAMDSEKC-SLPG----- 929
            + +D   +   FI     +G    N +         +LC DC A  + K   + G     
Sbjct: 879  SSIDACVRCENFIALQSDDGPGDKNAMVAAILPCYDLLCADCFAPIAPKLDEMAGKPVQV 938

Query: 930  -CGFLYEMQSP--EILTRP----------ENPNPKWPVPQDLIELQPSYRQWSNTNTFLK 976
             C F   + +P   ++T            EN   +    +  +   P  +  +  ++ L 
Sbjct: 939  SCAFCKSVIAPAYSVITTAGFEEYQASLLENKKNRKQSKEFGLYEGPHTKTKALISSLL- 997

Query: 977  QDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLD 1035
             D    N +S    P K +IFS +  H+ +IE  L   G+  +A +   M    +  +++
Sbjct: 998  -DTAEENKKSPHEPPIKSVIFSSWTSHLDLIEVALEENGLTGYARLDGTMSLKQRNSAIE 1056

Query: 1036 MFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
             F  D     LL+  G+  +GL+L+  + V++MEP ++ +   Q I R HR+G TR +  
Sbjct: 1057 TFSKDDDVTILLVTIGAGGVGLNLTAGSMVYIMEPQYNPATIAQAIDRVHRIGQTREVTT 1116

Query: 1095 ETLAMRGTVEEQMLEF------LQDTDRCRRLLKEELVKPEREGARS 1135
                M+ ++EE++ E       L D    R++ + E+ K   E  RS
Sbjct: 1117 IQYIMKDSIEEKITELAKRKQRLADMSLNRKMDRREMQKERLEEYRS 1163


>gi|402076288|gb|EJT71711.1| hypothetical protein GGTG_10965 [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 839

 Score =  123 bits (309), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 233/509 (45%), Gaps = 45/509 (8%)

Query: 616  TLIVVPSY-LVDHWKTQIQQHVRP-GQLHLFVWTDHKK--PSAHSLAWDYDVVITTFNRL 671
            TL+++PS  L+  W+T+IQ+HV+  G++ +  +   K+   +A  L    D+V+TT++ +
Sbjct: 314  TLVILPSVQLMSVWRTEIQRHVKAEGRIVVLDYHGPKRDRSAAKLLERGSDIVLTTYSTV 373

Query: 672  SAEWGRRKKSPMMQ-VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
              +  R + + ++  + W RV+LDE H + +    + + + A +LT+  RW LTGTP  N
Sbjct: 374  VEDHKRSQSARVLHSIEWYRVVLDEAHWVRNPS--SKRFKAAKALTSQRRWCLTGTPVQN 431

Query: 731  TPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK 790
            +    L+ L  ++ FL  + + Q  + +   IL P      + R R L+ L R +   R 
Sbjct: 432  S----LNDLAALVNFLDIQPFAQMSE-FKSHILEPLGNAGNQDRCRNLRNLLRMICLRRS 486

Query: 791  TDLQTIPLCIKEVTFLNFT----EEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQ 846
            +    +P   +EV +++ T    EE      E +  + R +  +         S    K+
Sbjct: 487  SKCLHLPKAEEEVIYIDQTEAEKEERRLVEKECLKRMERLVSGS-----GGRGSSAETKK 541

Query: 847  WKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGG 906
            +      +  LR  C      + T AG     + D  ++N                L+ G
Sbjct: 542  YNIMFDVMMQLRRLCNNGTFRRSTGAGTSYPSSTDPAIKNA-----------AAEDLDNG 590

Query: 907  NCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENP-NPKWPVPQDLIELQPS- 964
             C       +  +   E CS+  C       +P   +R   P +   P   D+  LQP+ 
Sbjct: 591  PC-EQCDGGELASTGEEYCSM--CQRRVGTAAP--TSRTATPRSGTSPGVLDVDMLQPTS 645

Query: 965  --YRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMY 1022
                 WS  ++ L+  +   N+ +N +  DK I+FS +   + ++E  L ++ I+   + 
Sbjct: 646  PPAMGWSGQSSKLEAVVS--NI-ANGSPGDKNIVFSSWTSTLDILEHLLQLSNIRCVRID 702

Query: 1023 SPMHSSNKIKSLDMFRHDASC-LALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVIS 1081
              + +  +   +  F  D    + LL  G  ++GL ++   RV ++EP W+ S+EEQ ++
Sbjct: 703  GRVKAEARADIIKTFSDDPEIPVILLTIGCGAVGLTITAANRVHMVEPQWNPSVEEQAVA 762

Query: 1082 RAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            RA RMG  R + V    +RG+VE+ +++ 
Sbjct: 763  RAVRMGQEREVAVLRYVVRGSVEKSIMDL 791


>gi|390337014|ref|XP_003724471.1| PREDICTED: uncharacterized protein LOC100893394 [Strongylocentrotus
            purpuratus]
          Length = 1731

 Score =  123 bits (309), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 240/548 (43%), Gaps = 72/548 (13%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDY----DVVITTF 668
            R TLIV P  ++ +W  Q+ +HV    Q+++ ++   +K     L  DY    DVVITT+
Sbjct: 1180 RTTLIVCPLSVMSNWIDQLNEHVADEVQVNVCMYHGAEK---KKLTVDYLKQQDVVITTY 1236

Query: 669  NRLSAEW-GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
              L+AE+  +++K  + ++ WLR++LDE H + +   L  + Q AI+L A  +W LTGTP
Sbjct: 1237 GTLAAEFKAKQEKGTLQKIEWLRIVLDEAHIIRNRRTL--QAQAAIALKAQCKWALTGTP 1294

Query: 728  TPNTPNSQLSHLQPMLKFL--HEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH--- 782
              N+    +  L  ++ FL    E +  N   W     R        G  RL +L++   
Sbjct: 1295 IQNS----IKDLWTLVAFLGMEHEPFDPNLNRWQLRKARSIADNDSAGIGRLRKLMNTLA 1350

Query: 783  -RCMISARKTDLQTIPLCIKEVT--FLNFTEEHAGTYNELVVTVRRNI--LMADWNDPSH 837
             R M S +      + L  + V   +++F+E+    Y       R  +     +     H
Sbjct: 1351 LRRMKSQKVNGKPLVDLPARNVVLQYVDFSEDEKKVYQTYEKEGRLAVSKYFREGTVLDH 1410

Query: 838  VESLLNPKQWKFRSTTIRNLRLSCC--------VAGHIKVTDAGEDIQETMDVLVENGLD 889
               +L           I  LR  CC         A   +  D  E   E    LV   + 
Sbjct: 1411 YGEIL---------VIILRLRQLCCHPALCAKAAAKLCQAIDGNERTDEEKAQLVAILVS 1461

Query: 890  PLSQ---EYAFIKYNLLNGGNCLR--HILCLDCV--AMDSEKCSLPGCGFLYEMQSPEIL 942
             LSQ   E   I    +      R  H+ C  C+   + SEK     C    +  S E L
Sbjct: 1462 FLSQGADEECCICLESVQDPVVTRCAHVFCQRCIEEVIISEK-ERACCPLCRQAISRESL 1520

Query: 943  TRPENPNPKWPVPQDLIELQP--SYRQWSNTNTFLKQDLYRPNLESNKALPD--KVIIFS 998
                       VP+D ++ +   + R+W ++    K D     L + +A     K I+ S
Sbjct: 1521 VH---------VPKDRLDAEKGNTDREWHSS---AKVDALMECLLTERAADKTTKSIVVS 1568

Query: 999  QFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH---DASCLALLMDGSASLG 1055
            QF   + V+ + LT  G KF+ +   M  + +  ++  F     D+  + LL   +  +G
Sbjct: 1569 QFTSFLDVLVKPLTEKGFKFSRLDGSMLRNARTAAISEFSSNDPDSPQIFLLSLKAGGVG 1628

Query: 1056 LDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTD 1115
            L+L+  +R++L++P W+ + EEQ   R HR+G T+ + +    +R ++EE ML+  +   
Sbjct: 1629 LNLTAASRLYLLDPAWNPACEEQSFDRCHRLGQTKDVTITKFLVRESIEEPMLKIQEFK- 1687

Query: 1116 RCRRLLKE 1123
              R+L+K+
Sbjct: 1688 --RQLMKQ 1693



 Score = 47.0 bits (110), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 14/85 (16%)

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTM 221
           C+   ++PHQ+ A+ WML RE N +          AT    Y   N+++   +     ++
Sbjct: 628 CIVSTMYPHQKQALHWMLARESNDKP---------ATPSALYH--NSLTNFTSAKRPDSV 676

Query: 222 RDFHGGMFCDEPGLGKTITALSLIL 246
           R   GG+  D+ GLGKT++ +SLIL
Sbjct: 677 R---GGILADDMGLGKTLSIISLIL 698


>gi|169601474|ref|XP_001794159.1| hypothetical protein SNOG_03602 [Phaeosphaeria nodorum SN15]
 gi|111067687|gb|EAT88807.1| hypothetical protein SNOG_03602 [Phaeosphaeria nodorum SN15]
          Length = 986

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 228/512 (44%), Gaps = 49/512 (9%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVW-TDHKKPSAHSLAWDYDVVITTFNRLS 672
            ATLI+ P  ++ +W +QIQ+H++P   L +  W  + K+P       +YDVVI+T++ +S
Sbjct: 408  ATLILAPVSVMSNWSSQIQKHLKPEHALRVMFWHGNRKQPIDPKQIENYDVVISTYDSVS 467

Query: 673  AEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS-LTASNRWLLTG 725
             EW  +K      K+ +  V W R++LDEGH++    N   K  +A++ L A +RW LTG
Sbjct: 468  VEWYSQKSTDLPRKAGVYSVKWRRIILDEGHSI---RNPKAKRTIAVTNLMAQSRWALTG 524

Query: 726  TPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRP-FEAEMEEGRSRLLQLLHRC 784
            TP  N     L  L  +++FL           +   I+RP  + +M+  R+  LQ+L   
Sbjct: 525  TPIINN----LKDLYSLIRFLRLSGGLDRFDIFHTAIMRPVLQGDMQGNRA--LQMLMSG 578

Query: 785  MISARKTDLQTIPLCIKEVT-FLNFTEEH---AGTYNELVVTV-------RRNILMADWN 833
            +   RK ++  I L + +++ +++  + H      Y+ L           R+NI      
Sbjct: 579  ICLRRKKEMSFIDLRLPDLSEYVHKIKLHPHEQEKYDALEAQAKGTLDVYRKNIGGQKSA 638

Query: 834  DPSH--VESLLNPKQWKFRSTTIRNLRLSCCVAG--HIKVTDAGEDIQETMDVLVENGLD 889
            D     +E LL  +Q       +   RLS  +       V D  E+ +  +  +++  +D
Sbjct: 639  DTYRHLLEVLLRMRQLCNHWQLVGEERLSSIMQQLEAEGVVDLTEENKAALQSMLQLMID 698

Query: 890  PLSQEYAFIKYNLLNGGNCLR--HILCLDCVAMDSE---KCSLPGCGFLYEMQSPEILTR 944
              SQE   I  + L      +  H  C  C+    E   KC  P C    E  S   +  
Sbjct: 699  --SQEDCPICLDTLKEPVITKCAHTFCTACIERVIEVQKKC--PMCRAELESLSSTTVKP 754

Query: 945  PENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALP-DKVIIFSQFLEH 1003
                  K  + QD +    S  Q    NT  K +     L++    P +K I+FSQ+   
Sbjct: 755  AVETTVKPELTQDQLADAASLEQ----NTSSKVEALLDILKATSQDPSNKTIVFSQWTSF 810

Query: 1004 IHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVT 1062
            + ++E  LT  G+ F  +   M +  +  +LD    + +C  +L      S+GL+L    
Sbjct: 811  LDLLEPHLTAGGLTFTRIDGSMTAPQRDTALDALESNPNCTIMLASLAVCSVGLNLVAAN 870

Query: 1063 RVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
             V + +  W  ++E+Q + R HR+G  R   V
Sbjct: 871  HVIMADSWWAPAIEDQAVDRVHRLGQKRETKV 902


>gi|393244679|gb|EJD52191.1| hypothetical protein AURDEDRAFT_159046 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1065

 Score =  123 bits (308), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 232/540 (42%), Gaps = 73/540 (13%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAW----------DYDVV 664
            ATLIV P+ L+D W  ++++  R G + + VW    +    +LA             +VV
Sbjct: 524  ATLIVAPTSLLDQWARELERSARAGAVKVTVWHGANRADLDALARRAGKGKGKEDTVEVV 583

Query: 665  ITTFNRLSAEWGRRKKS---PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRW 721
            +T++  L++E  R   +   P+  V WLRV+LDE H   S L+ T K     +L A  RW
Sbjct: 584  VTSYGVLASEHARMNDNYTPPVFAVDWLRVVLDEAHNCKSRLSKTAK--AVCALKARRRW 641

Query: 722  LLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLL 781
             LTGTP  N    +L  L  +LKFL  E + +    +   I  PF A   +    +  +L
Sbjct: 642  ALTGTPIVN----RLEDLYSLLKFLQYEPWSEFS-FFRSFISNPFLAHDPKALEIVQVIL 696

Query: 782  HRCMISARKTDLQT-----IPLCIKEVTF--LNFTEEHAGTYNELVVTVRRNILMADWND 834
              C++   K    +     + L  KEV    L F+      Y+ L    +       +ND
Sbjct: 697  ESCLLRREKNMKDSDGKPIVDLPPKEVNVERLMFSPAERKLYDLLYKNAKET-----FND 751

Query: 835  PSHVESLLNPKQWKFRSTTIRNLRLSCC----VAGH---IKVTDAGEDIQETMDVLVENG 887
              +  +L+  K +      +  LR +      V G    +K  D GED++  MD    N 
Sbjct: 752  -LNAHNLVG-KNYSMILAKLMILRRAVLHPSFVTGKEVLLKSEDTGEDLK--MDTFASNA 807

Query: 888  ---LDPLSQEYAFIKYNLLNGGNCL---RHILCLDCV-------AMDSEKCSLPGC--GF 932
               ++ +S+      ++++     L    H  C DC+           E+   P C  G 
Sbjct: 808  VQDIENISKGECPFCFDVMENPVLLPICGHSCCKDCILGWLLTCEQKGEEGVCPVCRRGP 867

Query: 933  LYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD 992
            + E +  +++      N K  V     + Q S +  + T +  K   + P          
Sbjct: 868  VKEEELLDVVQ-----NEKSEVVLRKNDFQSSTKLDALTASLRKLRDHDPAF-------- 914

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-- 1050
            + ++FSQF   + +IE  L   G +       ++   +   ++ F+  +S   +L     
Sbjct: 915  RAVVFSQFTSFLDLIEIALDRDGFQSYRFDGTLNIKKRAGVIEEFKRSSSKPKILAISLK 974

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +  +GL+L+    VF+M+  W+ S+E+Q I R HR+G  +P+HV    +  T+EE++L+ 
Sbjct: 975  AGGVGLNLTNAQHVFMMDCWWNASVEQQAIDRVHRIGQDKPVHVTHFIIEHTIEERVLQI 1034


>gi|384245407|gb|EIE18901.1| hypothetical protein COCSUDRAFT_49100 [Coccomyxa subellipsoidea
            C-169]
          Length = 2730

 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 134/549 (24%), Positives = 229/549 (41%), Gaps = 76/549 (13%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK-PSAHSLAWDYDVVITTFNRL 671
            SRATL+V    LV  W  + +  +  G LH++ +    +      LA DYD+V+TT+  L
Sbjct: 2138 SRATLVVCAVSLVGQWMEEAKSKLN-GSLHMYQYHGQGRIRDPKRLAVDYDLVVTTYQTL 2196

Query: 672  SAEWGRRKKS---------PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
             ++W    K          P+ Q+ W RV+LDE HT+ +      +     +L    RW 
Sbjct: 2197 GSDWRMYTKKGGNTDGRFQPLGQIKWHRVILDESHTVKA--GGAQQSMACCALKGDRRWC 2254

Query: 723  LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQN-------QKAWDGGILRPFEAEMEEGRS 775
             +GTP     ++++S       FL    +          +  W  G        + +G  
Sbjct: 2255 CSGTPI----STEISEFMGQFNFLGCPPFSTKNFFQYHVKPTWTTGAY-----NLTDGAV 2305

Query: 776  RLLQLLHRCMISARKTDLQ--------TIPLCIKEVTFLNFTEEHAGTY----NELVVTV 823
             LL  L R +I  R T  Q         +P   +E   +NF+E   G Y    NE     
Sbjct: 2306 CLLYALRRTLI--RHTQQQRLGGKTVCELPKKTEESIAVNFSEAEQGLYLRVHNEAKAEF 2363

Query: 824  RRNILMADWNDPSH---VESLLNPKQWKFRSTTIRN-LRLSCCVAGHIKVTDAGEDIQET 879
             R +         H   + SLL+P +       +R+  R    +A  + V     D ++ 
Sbjct: 2364 HRYVSRGAHYVAKHLLSIMSLLSPLRAICSGGVLRDKARPFAPMADSLDVKVPSLDEEQE 2423

Query: 880  MDVLVENGLDPLSQEYAFIKYNLLNGGNC---LRHILCLDCVAMD---SEKCSLPGCG-- 931
            + V V+  L   S+E + I  NL     C     H  C +C+  +    +KC L  C   
Sbjct: 2424 VPVGVDPNLVAPSEECS-ICLNLDMERPCRTPCMHWFCRECITAELTVRDKCPL--CRQQ 2480

Query: 932  -FLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKAL 990
                E+     ++R E+            +L       S T     +   R  L+    +
Sbjct: 2481 ISAAELTEGVSVSRGEDD-----------QLDAGVSSSSTTTAVASESKLRMLLDELAKM 2529

Query: 991  PD-----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
             +     K +IF+QF   +  +  +LT  G  +  +   M    + ++++ F+ D     
Sbjct: 2530 REGDPSAKALIFTQFNATLEWLMARLTQEGYGYRTISGSMPLKKRSQAIEAFQRDPPTTV 2589

Query: 1046 LLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
             L+   S ++G++L+    VF++EP  +  +E+Q + RA RMG TRP+ V+ L ++G+VE
Sbjct: 2590 FLLSMRSGAVGINLTAANHVFILEPAMNPVLEDQAVGRAFRMGQTRPVIVKKLYIKGSVE 2649

Query: 1105 EQMLEFLQD 1113
            E+++E + D
Sbjct: 2650 ERIMELVND 2658



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 64/105 (60%), Gaps = 1/105 (0%)

Query: 1010 QLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLME 1068
            +LT  G  +  +   M    + ++++ F+ D      L+   S ++G++L+    VF++E
Sbjct: 1252 RLTQEGYGYRTISGSMPLKKRSQAIEAFQRDPPTTVFLLSMRSGAVGINLTAANHVFILE 1311

Query: 1069 PIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
            P  + ++E+Q + RA RMG TRP+ V+ L ++G+VEE+++E ++D
Sbjct: 1312 PAMNPALEDQAVGRAFRMGQTRPVIVKKLYIKGSVEERIMELVKD 1356



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 17/144 (11%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH-KKPSAHSLAWDYDVVITTFNRL 671
           SRATL+V    LV  W  + +  +  G L ++ +    +     SLA DYD+V+TT+  L
Sbjct: 811 SRATLVVCAVSLVGQWMEEARSKLN-GSLRMYQYHGQGRNRDVQSLATDYDLVVTTYQTL 869

Query: 672 SAEWGRRKKS---------PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            ++W    K          P+ Q+HW RV+LDE HT+ +      +     +L A  RW 
Sbjct: 870 GSDWRMYTKKGGNTDGRFQPLGQIHWHRVVLDESHTVKA--GGAQQAMACCALKADRRWC 927

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFL 746
            +GTP     ++++S       FL
Sbjct: 928 CSGTPI----STEVSDFMGQFNFL 947



 Score = 51.2 bits (121), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 99/245 (40%), Gaps = 47/245 (19%)

Query: 29  ENGAARAAVLVDIYLPIAAWSGWQFPKSGAIAGSLFRHVSCDW-----EKRKSVLLDGGE 83
           E GA  A + + +++       W   + G      FR    DW     EKR+   L+  E
Sbjct: 600 EGGAECATLAIQVFV-------WH--RRGTFNRDFFRSPD-DWAPAGKEKRRFRYLENSE 649

Query: 84  CFKDGCDSSIWNISDCHVLDWKPDSSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLV 143
           C +D             +L   P +  ++ E  +C + +  +  +  +++L +L      
Sbjct: 650 CLEDTMR---------FLLKDNPLAEAMEEELKACLSKMRSVGSNRGVTMLMKL------ 694

Query: 144 RIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFY 203
            + A  R          P + ++L P+Q+ ++ +ML  E      R   ++   T  GF 
Sbjct: 695 -MEAGERP----EEPQPPGLTVQLHPYQRQSLRFMLDNESGEGGHRRHFWVPCKTPSGFT 749

Query: 204 FYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILK-------TQGTLADPP 256
           F+ + +        AP+     GG   +E G GKT+  L+LIL          GTLA  P
Sbjct: 750 FWWSPIFNRACKQVAPSP---WGGFLAEEMGCGKTVEVLALILSNPASPDVVSGTLA--P 804

Query: 257 DGVKI 261
           DGV I
Sbjct: 805 DGVSI 809


>gi|338714862|ref|XP_001491667.3| PREDICTED: helicase-like transcription factor [Equus caballus]
          Length = 1018

 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 128/538 (23%), Positives = 240/538 (44%), Gaps = 79/538 (14%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 494  RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILT 553

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 554  HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 610

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 611  ---LKDLWSLLSFLKLKPF-LDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTS 666

Query: 793  ------LQTIPLCIKEVTFLNFTEEHAGTY----NELVVTVRR----NILMADWNDPSHV 838
                  +  +P     +  +  ++E    Y    NE   T+ R      ++A + D   +
Sbjct: 667  KIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGL 726

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFI 898
              LL  +Q    +  + +   S   +G+ +  +  + +   M +++ +G D   +E A  
Sbjct: 727  --LLRLRQICCHTHLLTSAVSSSGPSGNDRPEELRKKLIRKMKLILSSGSD---EECA-- 779

Query: 899  KYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPV---- 954
                          +CLD + +      +  C  ++       + + E P+ K P+    
Sbjct: 780  --------------ICLDSLTVP----VITHCAHVFCKPCICQVIQNEQPHAKCPLCRND 821

Query: 955  --PQDLIELQP----------SYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQFL 1001
                +L+E  P          S  +W++++      L    ++  K  P+ K ++ SQF 
Sbjct: 822  IHGDNLLECPPEELARDTERKSNMEWTSSSKI--NALMHALIDLRKKNPNIKSLVVSQFT 879

Query: 1002 EHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSASLGLDL 1058
              + +IE  L  +G  F  +   M    +++S+  F++  +    + LL   +  +GL+L
Sbjct: 880  TFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTVMLLSLKAGGVGLNL 939

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            S  +RVFLM+P +D         R HR+G  + + +    ++ +VEE ML+ +Q+T R
Sbjct: 940  SAASRVFLMDPCFD---------RCHRLGQKQEVIITKFIVKDSVEENMLK-IQNTKR 987



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P + +  ++     Y NT++ + +    P   + HG
Sbjct: 260 LLPHQKQALAWMVSRENSKEL---PPFWEQRSD----LYYNTIT-NFSEKDRP--ENVHG 309

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 310 GILADDMGLGKTLTAIAVIL 329


>gi|261198487|ref|XP_002625645.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081]
 gi|239594797|gb|EEQ77378.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081]
          Length = 929

 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 135/541 (24%), Positives = 229/541 (42%), Gaps = 86/541 (15%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S+ TL++ P  ++ +W+ QI QH+   Q L + ++    K  A +L  +YDVVITT+  L
Sbjct: 393  SKTTLVISPLGVMSNWRDQIAQHIHNDQALRVLIYHGVGKKEAKNLN-NYDVVITTYGAL 451

Query: 672  SAEWG--------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
            ++E+          +    +  + W RV+LDEGHT+ +    T   + A  L A +RW L
Sbjct: 452  ASEYAPIENKLPNSKPSQGLFSLRWRRVVLDEGHTIRNP--RTRGARAACKLEADSRWSL 509

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTP  N     L  L   +KFL      ++   ++  ++RP  A  +   + LLQ L  
Sbjct: 510  TGTPIVNN----LKDLYSQVKFLGISGGLEDLTVFNSAVIRPLTA-CDPNANLLLQALMG 564

Query: 784  CMISARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILM---ADWNDPS 836
             +   RK D+  I    P     V  + F       Y+   +   + +L+   A+ N+ +
Sbjct: 565  TICLRRKKDMNFINLRLPPLSSHVLHVKFLPHEQEKYD---MAEAKGVLLDYQANANNKN 621

Query: 837  H-------VESLLNPKQ----WKFRSTTIRNL-------RLSCCVAGHIKVTDAGEDIQE 878
                    +E LL  +Q    WK     I NL       ++      +IK   A   ++ 
Sbjct: 622  GGATYSVLLEVLLRMRQVCNHWKLCQNRINNLMELLEQHKVVALTPQNIKALQALLQLKI 681

Query: 879  TMDVLVENGLDPLSQ----------EYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLP 928
                +    LD L Q          +Y+ I+  +       R   C  C A   +  SL 
Sbjct: 682  ESQEMCAICLDTLRQPVITPCAHTFDYSCIEQAI------ERQHKCPLCRAEIEDCKSLV 735

Query: 929  GCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNK 988
                     + EI   PE  + K    + L+++  +  Q  NT T +             
Sbjct: 736  APAADLGEDTNEIDIDPETTSSKI---EALLKILTAKGQAPNTKTVV------------- 779

Query: 989  ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM 1048
                    FSQ++  + ++E QL   GI FA +   M S+ +  ++    +D +C  LL 
Sbjct: 780  --------FSQWVSFLDIVEPQLARNGITFARIDGRMSSAKRDAAMKALSNDPNCTVLLA 831

Query: 1049 D-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
                 S+GL+L    +V L +  W  ++E+Q + R +R+G  RP  +  L M  ++E+++
Sbjct: 832  SLNVCSVGLNLVAANQVILADSWWAPAIEDQAVDRVYRLGQKRPTTIWRLVMENSIEDRV 891

Query: 1108 L 1108
            L
Sbjct: 892  L 892



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 24/126 (19%)

Query: 153 RCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFY------V 206
           R   AS    +  +L P+Q+  + WML +E        P +    + D    +       
Sbjct: 292 RMPMASCPKALSTELLPYQRQGLAWMLDKE-------SPKFPSKGSRDVVQLWKRSGNMF 344

Query: 207 NTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL---------KTQGTLADPPD 257
             ++ +  T T P +    GG+  D+ GLGKT+  +SLIL          ++ TL   P 
Sbjct: 345 TNIATNYTTATEPPL--ASGGILADDMGLGKTVQIISLILANSAPKTKESSKTTLVISPL 402

Query: 258 GVKIIW 263
           GV   W
Sbjct: 403 GVMSNW 408


>gi|317037066|ref|XP_001398335.2| SNF2 family helicase [Aspergillus niger CBS 513.88]
          Length = 917

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 232/539 (43%), Gaps = 60/539 (11%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            SR TLIV P  ++ +W+ Q   H    +   + ++    K  A +L   YDVV+T++  L
Sbjct: 385  SRTTLIVAPVGVMSNWRNQALVHTHSDKAPKVLIYHGQGKKEASNLD-QYDVVVTSYGAL 443

Query: 672  SAEWGRRKKSP----MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGT 726
            + E+    K+P    +  +HW RV+LDEGHT+    N  +K  +A  +L A +RW LTGT
Sbjct: 444  AMEYSPNAKAPPKKGLFSIHWRRVVLDEGHTI---RNPRSKGALAACNLRAGSRWTLTGT 500

Query: 727  PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
            P  NT    L  L   ++FL      ++   ++  ++RP  +   + R  LLQ L   + 
Sbjct: 501  PIVNT----LKDLYSQVRFLRLTGGLEDLAVFNSVLIRPLLSGDPDSR-LLLQALMTTIC 555

Query: 787  SARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
              R+ D+  +    P     +  + F       Y+      +  +L   + D S+     
Sbjct: 556  LRRRKDMNFVNLRLPPLTSRILRIKFHTHEQEKYDMFQSEAKGMLLDFKFKDKSNT---- 611

Query: 843  NPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQE-----YAF 897
                +      I  LR  C      K       + +  D+L  N + PL+ E        
Sbjct: 612  ---NYSHLLEVILRLRQVCNHWALCK-----NRLDKLADLLENNKVVPLTPENIKALQEM 663

Query: 898  IKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNP--KWPVP 955
            ++  + +   C    +CLD +    E+  +  C   ++    E +   ++  P  +  + 
Sbjct: 664  LQIRIESQDTC---PICLDNL----EQPVITACAHAFDRPCIEQVIERQHKCPMCRAEIQ 716

Query: 956  QDLIELQPSYRQWSNTNTFLKQDLYRPNLE----------SNKALPDKVIIFSQFLEHIH 1005
                 + P+     +T+T +  D   P+ +            +A   K +IFSQ+   + 
Sbjct: 717  DTTTLVSPAVEMGESTDT-VDADPDNPSSKIEALIKILTAKGQAQGTKTVIFSQWTSFLD 775

Query: 1006 VIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRV 1064
            +IE  L   GI FA +   M S ++  S   F  D SC  LL   S  S+GL+L    + 
Sbjct: 776  LIEPHLFRHGIGFARIDGKMSSISRDNSTLRFSTDPSCTVLLASLSVCSVGLNLVAANQA 835

Query: 1065 FLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKE 1123
             L +  W  ++E+Q + R +R+G TR   V  L M  ++E+++L   ++    R+L+ E
Sbjct: 836  ILCDSWWAPAIEDQAVDRVYRLGQTRETTVWRLVMEDSIEDRVLAIQENK---RKLMLE 891


>gi|340520877|gb|EGR51112.1| predicted protein [Trichoderma reesei QM6a]
          Length = 818

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 231/517 (44%), Gaps = 56/517 (10%)

Query: 613  SRATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            SRATLI+VPS  LV +W  +IQ ++R G L +  +    +P +     + D+V+TT++ L
Sbjct: 307  SRATLIIVPSALLVLNWIKEIQNYLREG-LDVIKYHGSDRPRSLERVANADIVVTTYDTL 365

Query: 672  SAEW-GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
            + E+  + + S +  + W RV+LDE H +      T+  +    L A++RW LTGTP  N
Sbjct: 366  TVEFLNKSRPSLLHSIDWYRVVLDEAHII--RRRGTSNYRACDKLAANSRWCLTGTPIQN 423

Query: 731  TPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEG---RSRLLQLLHRCMIS 787
                +L+ +  +  F+    +  +   +   I  PFE  ME+    ++RL+ L+   +  
Sbjct: 424  ----KLADIGTLFTFIRVHPFS-DPATFRRWIELPFEQNMEDSTVVKNRLIMLIE-ALCL 477

Query: 788  ARKTDLQTIPLCIKEVTFLNFT----EEHAGTYNELVVTVRRNILMADWNDP-----SHV 838
             R  D+  +P   + +  L F+    E++  T N L   +R  +   + +       +H+
Sbjct: 478  RRTKDIVHLPQLQERLRKLEFSPEEREQYENTKNILYRMIRYQVGEVEKSSKFGLFQAHL 537

Query: 839  ESLLNPKQWKFR---STTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEY 895
            +  L      F+   S   RN R  C       V++ G+          E   D   Q  
Sbjct: 538  QMRLLCNHGTFQQPFSWHRRNYRAQCKAV----VSELGQS--------SEISCDGCKQRM 585

Query: 896  AFIKYNLLNGG---NCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPK- 951
              +  + L+ G    C  HILC +C+   + +      G   E +   + TR      + 
Sbjct: 586  PVLGSSQLSDGFHEQC-SHILCFECMEQSNSR------GERGEARHCPLCTRVRQATTED 638

Query: 952  -WPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQ 1010
             W         + +Y   +   T +K  +    ++  K    K IIFS +   + ++ + 
Sbjct: 639  GWTTYSG---DEATYFSNNGHATKMKALIEDVKVDLRKT---KSIIFSSWTRTLQLLSRY 692

Query: 1011 LTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPI 1070
            LT A + + G+        + K L  F  + + + ++  G+  +GL+L+   R+F++EP 
Sbjct: 693  LTEAQVPYVGIDGNCSLKERQKKLVEFESEDTPVLIMTTGTGGVGLNLTCANRIFIVEPQ 752

Query: 1071 WDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            W+  +E Q I+RA R+G    + V    ++ T+EE M
Sbjct: 753  WNPGVESQAIARAIRLGQKNNVEVTRYMIQDTIEEDM 789



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)

Query: 150 RHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTV 209
           RHL  +A      +  KL  HQ+ A+ +M+ RE      +  L+  +  EDG   Y + +
Sbjct: 189 RHLEAVAGG--DGVTQKLLKHQEEALGFMMERETGHINDKFRLWEAIEPEDGGKVYRHRI 246

Query: 210 SGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILK 247
           + +  T       +  GG+  DE G+GK+++ L+LI+K
Sbjct: 247 TREEVTNNIQP-DESGGGILADEMGMGKSLSILALIMK 283


>gi|350634004|gb|EHA22368.1| hypothetical protein ASPNIDRAFT_192821 [Aspergillus niger ATCC 1015]
          Length = 917

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 232/539 (43%), Gaps = 60/539 (11%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            SR TLIV P  ++ +W+ Q   H    +   + ++    K  A +L   YDVV+T++  L
Sbjct: 385  SRTTLIVAPVGVMSNWRNQALVHTHSDKAPKVLIYHGQGKKEASNLD-QYDVVVTSYGAL 443

Query: 672  SAEWGRRKKSP----MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGT 726
            + E+    K+P    +  +HW RV+LDEGHT+    N  +K  +A  +L A +RW LTGT
Sbjct: 444  AMEYSPNAKAPPKKGLFSIHWRRVVLDEGHTI---RNPRSKGALAACNLRAGSRWTLTGT 500

Query: 727  PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
            P  NT    L  L   ++FL      ++   ++  ++RP  +   + R  LLQ L   + 
Sbjct: 501  PIVNT----LKDLYSQVRFLRLTGGLEDLAVFNSVLIRPLLSGDPDSR-LLLQALMTTIC 555

Query: 787  SARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
              R+ D+  +    P     +  + F       Y+      +  +L   + D S+     
Sbjct: 556  LRRRKDMNFVNLRLPPLTSRILRIKFHTHEQEKYDMFQSEAKGMLLDFKFKDKSNT---- 611

Query: 843  NPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQE-----YAF 897
                +      I  LR  C      K       + +  D+L  N + PL+ E        
Sbjct: 612  ---NYSHLLEVILRLRQVCNHWALCK-----NRLDKLADLLENNKVVPLTPENIKALQEM 663

Query: 898  IKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNP--KWPVP 955
            ++  + +   C    +CLD +    E+  +  C   ++    E +   ++  P  +  + 
Sbjct: 664  LQIRIESQDTC---PICLDNL----EQPVITACAHAFDRPCIEQVIERQHKCPMCRAEIQ 716

Query: 956  QDLIELQPSYRQWSNTNTFLKQDLYRPNLE----------SNKALPDKVIIFSQFLEHIH 1005
                 + P+     +T+T +  D   P+ +            +A   K +IFSQ+   + 
Sbjct: 717  DTTTLVSPAVEMGESTDT-VDADPDNPSSKIEALIKILTAKGQAQGTKTVIFSQWTSFLD 775

Query: 1006 VIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRV 1064
            +IE  L   GI FA +   M S ++  S   F  D SC  LL   S  S+GL+L    + 
Sbjct: 776  LIEPHLFRHGIGFARIDGKMSSISRDNSTLRFSTDPSCTVLLASLSVCSVGLNLVAANQA 835

Query: 1065 FLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKE 1123
             L +  W  ++E+Q + R +R+G TR   V  L M  ++E+++L   ++    R+L+ E
Sbjct: 836  ILCDSWWAPAIEDQAVDRVYRLGQTRETTVWRLVMEDSIEDRVLAIQENK---RKLMLE 891


>gi|336268062|ref|XP_003348796.1| hypothetical protein SMAC_01819 [Sordaria macrospora k-hell]
 gi|380094054|emb|CCC08271.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 972

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 239/528 (45%), Gaps = 65/528 (12%)

Query: 616  TLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TLIV P  ++ +WK QI++H+    Q  + ++   K+        D DVVIT++  LS E
Sbjct: 448  TLIVAPVGVMSNWKQQIRRHIHEEHQPSIVMYHGSKRKEFADTLHDQDVVITSYGTLSDE 507

Query: 675  WGRRKKSPMMQVHWLRV--MLDEGHTLGSSLNLTNKL-QMAISLTASNRWLLTGTPTPNT 731
                    +++  W R    +   + L S  N   K+ + A  L A +RW+LTGTP  N+
Sbjct: 508  -------ALVKTRWRRTWNFVYNTNRLHSIRNAKAKVAENACKLEAKSRWVLTGTPIVNS 560

Query: 732  PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
                +  L  M+KFL      +    ++  + RP      +G + LL+ L R +   RK 
Sbjct: 561  ----VKDLHSMVKFLRITGGIEQPDIFNTVLSRPLANGEPKGEA-LLRGLMRDLCIRRKK 615

Query: 792  DLQTIPLCIKEVT----FLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQW 847
            D+  + L + E T     + F  +    Y+ L+   +   ++ D+   S         Q 
Sbjct: 616  DMNFVDLKLPEKTEQTVSITFWPDEQKKYDALLSEAQG--VLEDYRRQS------KRSQG 667

Query: 848  KFRSTTIRNLRL--SC-----CVAGHIKVTDAGEDIQETMDVLVENG--------LDPLS 892
            +F+    R LRL  +C     C     +V D   D ++ +D+  EN         L   S
Sbjct: 668  QFQGVLERLLRLRQTCNHWVLCKKRITEVLDLLAD-KDVVDLTPENKVILQQALQLYIES 726

Query: 893  QEYAFIKYNLLNG---GNCLRHILCLDCVAMDSE---KCSLPGCGFLYEMQSPEILTRPE 946
            QE   I    LN     +C +H+ C  C+    E   KC  P C      ++P    +  
Sbjct: 727  QEECPICIEPLNNPVITHC-KHVFCRGCIDKVFEVQQKC--PMC------RAPLSEDKLL 777

Query: 947  NPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHV 1006
             P P+    QD  EL+ S  + S T+  L+  L + +L   K   +KVIIFSQ+   + +
Sbjct: 778  EPAPEHLATQDEEELE-SETKSSKTDAVLR--LVKDSL--GKDAGNKVIIFSQWTSFLTI 832

Query: 1007 IEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVF 1065
            I+ QL  AG  +  +   M+++ +  ++    +D +   LL   G  S+GL+L     V 
Sbjct: 833  IQHQLDEAGYTYTRIDGSMNTAQRDAAIRALDYDPNTRILLASLGVCSVGLNLVSANTVI 892

Query: 1066 LMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
            L +  W  ++E+Q + R HR+G TR  +V  L M  T+EE++L+  ++
Sbjct: 893  LADSWWAPAIEDQAVDRVHRLGQTRETNVYRLVMENTIEERVLDIQKE 940


>gi|358373232|dbj|GAA89831.1| SNF2 family helicase [Aspergillus kawachii IFO 4308]
          Length = 916

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 132/538 (24%), Positives = 230/538 (42%), Gaps = 58/538 (10%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            SR TLIV P  ++ +W+ Q   H    +   + ++    K  A +L   YDVV+T++  L
Sbjct: 384  SRTTLIVAPVGVMSNWRNQALVHTHSDKAPKVLIYHGQGKKEASNLD-QYDVVVTSYGAL 442

Query: 672  SAEWGRRKKSP----MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGT 726
            + E+    K+P    +  +HW RV+LDEGHT+    N  +K  +A  +L A +RW LTGT
Sbjct: 443  AMEYSPNAKAPPKKGLFSLHWRRVVLDEGHTI---RNPRSKGALAACNLRAGSRWTLTGT 499

Query: 727  PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
            P  NT    L  L   ++FL      ++   ++  ++RP  +   + R  LLQ L   + 
Sbjct: 500  PIVNT----LKDLYSQVRFLRLTGGLEDLAVFNSVLIRPLLSGDPDSR-LLLQALMTTIC 554

Query: 787  SARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
              R+ D+  +    P     +  + F       Y+      +  +L     D +      
Sbjct: 555  LRRRKDMNFVNLRLPPLTSRILRIKFHPHEQEKYDMFQSEAKGMLLDFKSKDKTST---- 610

Query: 843  NPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQE-----YAF 897
                +      I  LR  C      K       + +  D+L  N + PL+ E        
Sbjct: 611  ---NYSHLLEVILRLRQVCNHWALCK-----NRLDKLADLLENNKVVPLTPENIKALQDM 662

Query: 898  IKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNP--KWPVP 955
            ++  + +   C    +CLD +    E+  +  C   ++    E +   ++  P  +  +P
Sbjct: 663  LQIRIESQDTC---PICLDNL----EQPVITACAHAFDRSCIEQVIERQHKCPMCRAEIP 715

Query: 956  QDLIELQPSYRQWSNTNTFLK---------QDLYRPNLESNKALPDKVIIFSQFLEHIHV 1006
                 + P+     +T+T            + L +      +A   K +IFSQ+   +++
Sbjct: 716  DTATLVSPAVEMGESTDTVDADPDNPSSKIEALIKILTAQGQASGTKTVIFSQWTSFLNL 775

Query: 1007 IEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVF 1065
            IE  L   GI FA +   M S ++  S   F  D SC  LL   S  S+GL+L    +  
Sbjct: 776  IEPHLLRHGIGFARIDGKMSSISRDNSTLRFSTDPSCTVLLASLSVCSVGLNLVAANQAI 835

Query: 1066 LMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKE 1123
            L +  W  ++E+Q + R +R+G TR   V  L M  ++E+++L   ++    R+L+ E
Sbjct: 836  LCDSWWAPAIEDQAVDRVYRLGQTRETTVWRLVMEDSIEDRVLAIQENK---RKLMLE 890


>gi|46137913|ref|XP_390647.1| hypothetical protein FG10471.1 [Gibberella zeae PH-1]
          Length = 1033

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 251/559 (44%), Gaps = 73/559 (13%)

Query: 585  KTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVV-PSYLVDHWKTQIQQHVRPGQLHL 643
            KTLDN   + A L+ A  +   + R   SR+TL+VV  + LVD W  ++++H++ G L +
Sbjct: 484  KTLDN-GQEWANLKNAEHKGRKTTRF--SRSTLVVVSAALLVDEWMNEVKKHLQTG-LKI 539

Query: 644  FVWTDHKKP---SAHSLAWDYDVVITTFNRLSAEW--GRRKKSPMMQVHWLRVMLDEGHT 698
              +   ++P   S  ++  D D+V+TT++ L+ E+  G+ K SP+ ++ W RV+LDE H 
Sbjct: 540  VKYHGDRRPKDLSELNMVEDSDIVVTTYHTLTTEYLIGKGKTSPLYKLGWYRVVLDEAHI 599

Query: 699  LGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQ--K 756
            +      T   Q    L A++RW L+GTP  N    +L+ +  + +F+  E + +    +
Sbjct: 600  IRRP--STKFFQACDYLHANSRWCLSGTPIQN----KLADIGSLFRFIRAEPFDKASEFR 653

Query: 757  AWDGGILRPFEAEMEE---GRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHA 813
             W   I  PF    ++    + RL+ LL   +   R  ++  +P   + V  LNFT+   
Sbjct: 654  KW---IETPFGNSYDDLTLVKDRLVMLLE-ALCLRRTREVLDLPKTRQFVRHLNFTKPER 709

Query: 814  GTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIK----- 868
              Y        RNI+M   N    +  +    Q+      ++ LR+ C    + K     
Sbjct: 710  DQYERT-----RNIIMR--NMEHRMGEVEKSSQFGMFQMWLQ-LRIVCNHGTYQKLFSWH 761

Query: 869  -----------VTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDC 917
                       V  AG+   E + V  E  +  L  +++   +      +   H+LC  C
Sbjct: 762  RRNLLEEREAIVGTAGQ-YGEMLCVGCEQPMPVLGHDWSKKMFE-----DGCSHVLCTKC 815

Query: 918  VAMDSEKCSL-------PGCGFLYEMQSP---EILTRPENPNPKWPVPQDLIELQPSYRQ 967
            +  DS+   L       P C   Y+  SP   E          +    +D  E   +   
Sbjct: 816  IE-DSQFSELEISQRRCPVCVRWYQAPSPAGDEEDGTSRRKRKRNATTKDDHEHYFNAEG 874

Query: 968  WSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHS 1027
             S     L +D+ R +L + K+     IIFS +   +H+I + L  AGI +  +      
Sbjct: 875  HSTKIRALVEDV-RKDLWTTKS-----IIFSCWTRTLHLIARHLEKAGIPYLQLDGNSPL 928

Query: 1028 SNKIKSLDMFRHDASCLALLM-DGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRM 1086
              + ++L+ F +      L+M  G+ + GL+L+   R+F+ E  W+ S+E Q ISRA R+
Sbjct: 929  PQRQQTLNKFENGTETPVLIMTTGTGAFGLNLTSANRIFIAELQWNPSVESQAISRAIRL 988

Query: 1087 GATRPIHVETLAMRGTVEE 1105
            G  + + V     + TVEE
Sbjct: 989  GQKKEVRVTRYITKDTVEE 1007


>gi|134083904|emb|CAK48808.1| unnamed protein product [Aspergillus niger]
          Length = 875

 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 232/539 (43%), Gaps = 60/539 (11%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            SR TLIV P  ++ +W+ Q   H    +   + ++    K  A +L   YDVV+T++  L
Sbjct: 343  SRTTLIVAPVGVMSNWRNQALVHTHSDKAPKVLIYHGQGKKEASNLD-QYDVVVTSYGAL 401

Query: 672  SAEWGRRKKSP----MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGT 726
            + E+    K+P    +  +HW RV+LDEGHT+    N  +K  +A  +L A +RW LTGT
Sbjct: 402  AMEYSPNAKAPPKKGLFSIHWRRVVLDEGHTI---RNPRSKGALAACNLRAGSRWTLTGT 458

Query: 727  PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
            P  NT    L  L   ++FL      ++   ++  ++RP  +   + R  LLQ L   + 
Sbjct: 459  PIVNT----LKDLYSQVRFLRLTGGLEDLAVFNSVLIRPLLSGDPDSR-LLLQALMTTIC 513

Query: 787  SARKTDLQTI----PLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
              R+ D+  +    P     +  + F       Y+      +  +L   + D S+     
Sbjct: 514  LRRRKDMNFVNLRLPPLTSRILRIKFHTHEQEKYDMFQSEAKGMLLDFKFKDKSNT---- 569

Query: 843  NPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQE-----YAF 897
                +      I  LR  C      K       + +  D+L  N + PL+ E        
Sbjct: 570  ---NYSHLLEVILRLRQVCNHWALCK-----NRLDKLADLLENNKVVPLTPENIKALQEM 621

Query: 898  IKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNP--KWPVP 955
            ++  + +   C    +CLD +    E+  +  C   ++    E +   ++  P  +  + 
Sbjct: 622  LQIRIESQDTC---PICLDNL----EQPVITACAHAFDRPCIEQVIERQHKCPMCRAEIQ 674

Query: 956  QDLIELQPSYRQWSNTNTFLKQDLYRPNLE----------SNKALPDKVIIFSQFLEHIH 1005
                 + P+     +T+T +  D   P+ +            +A   K +IFSQ+   + 
Sbjct: 675  DTTTLVSPAVEMGESTDT-VDADPDNPSSKIEALIKILTAKGQAQGTKTVIFSQWTSFLD 733

Query: 1006 VIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRV 1064
            +IE  L   GI FA +   M S ++  S   F  D SC  LL   S  S+GL+L    + 
Sbjct: 734  LIEPHLFRHGIGFARIDGKMSSISRDNSTLRFSTDPSCTVLLASLSVCSVGLNLVAANQA 793

Query: 1065 FLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKE 1123
             L +  W  ++E+Q + R +R+G TR   V  L M  ++E+++L   ++    R+L+ E
Sbjct: 794  ILCDSWWAPAIEDQAVDRVYRLGQTRETTVWRLVMEDSIEDRVLAIQENK---RKLMLE 849


>gi|224010774|ref|XP_002294344.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220969839|gb|EED88178.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1504

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 156/364 (42%), Gaps = 99/364 (27%)

Query: 610  LYLSRATLIVVPSYLVDHWKTQIQQHV------------RPGQLHLFVWTDHKKPSAHSL 657
            L  S +TL+VVP+ L+ HW+ Q   HV                L  F  +   + +   +
Sbjct: 734  LLFSSSTLLVVPNPLLSHWEEQFTMHVDFDYCKRRDESSTSDPLIYFHTSQKNQVARDKI 793

Query: 658  AWD-----------------------------YDVVITTFNRLSAE-------------- 674
            ++D                             + +V+T++NRL+AE              
Sbjct: 794  SFDLEPFLLQENPFMFIDDGSKALPPSDVLSRFRIVLTSYNRLTAEYYLTSFQQWKWKLG 853

Query: 675  ------------------WGRR----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
                              WG      K SP+++VHWLR+++DEGH +G   +++N +Q A
Sbjct: 854  SVEQEVKASKKGSVGERYWGEEGFVPKASPLLKVHWLRLIVDEGHVMGK--DVSNAIQFA 911

Query: 713  ISLTASNRWLLTGTPTPNTPNS----QLSHLQPMLK--FLHEEAYGQNQKAWDGGILRPF 766
              ++A  RW++TGTPT    +     QL HL   LK  F   E  GQ +K W   I R +
Sbjct: 912  SWVSADRRWVMTGTPTQQISSQNGLRQLFHLSNFLKHEFFARE-LGQ-EKTWTHLISRGW 969

Query: 767  EAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRN 826
            + E      RL  LL   MI   K DL  IP  I   ++++ ++    TYN L   +R N
Sbjct: 970  KDEKVASFFRLSHLLSFLMIRHTKADLVEIPPPIFSTSYISLSQSETTTYNTLAAVIRTN 1029

Query: 827  IL-------MADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQET 879
            ++        + W D     SLLNP+Q +F S  + NLR++CC    I  + +     ET
Sbjct: 1030 LITTSMEGRTSGWQD-----SLLNPRQSRFASEALTNLRVACCGGCQILPSISNVHWNET 1084

Query: 880  MDVL 883
            + +L
Sbjct: 1085 LTLL 1088



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 5/122 (4%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKS--LDMFRHDASCLALLM 1048
            P K I+FSQF         +L     +F G      S  K ++  L  FR D  C  +L+
Sbjct: 1322 PLKAIVFSQFRPIYEYFGDRLIR---EFGGACVADFSFTKTRNEELKKFRLDPQCFIMLL 1378

Query: 1049 DGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
                S GLDLSF T +F ++ I+D+S+E+QV++RA+RMGAT P++VE L  + ++EE M 
Sbjct: 1379 SKQGSHGLDLSFCTHIFFLDTIYDKSLEQQVVARAYRMGATGPVYVEQLTAKDSIEEVMN 1438

Query: 1109 EF 1110
            E 
Sbjct: 1439 EM 1440



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 6/50 (12%)

Query: 213 IATGTAPTMR-DFHGGMFCDEPGLGKTITALSLILKTQG--TLAD---PP 256
           I   T+P  R    GG+ CD+PGLGKTIT +SLIL++ G  T AD   PP
Sbjct: 515 IPVETSPVSRKSARGGLLCDDPGLGKTITVISLILRSYGLSTKADESLPP 564


>gi|378730613|gb|EHY57072.1| hypothetical protein HMPREF1120_05122 [Exophiala dermatitidis
            NIH/UT8656]
          Length = 1014

 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 139/538 (25%), Positives = 234/538 (43%), Gaps = 78/538 (14%)

Query: 616  TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS---AHSLAWDYDVVITTFNRLS 672
            TLI+ P  ++ +W  Q   HV+  +  L V T H + +   +     +YD+V+TT+  ++
Sbjct: 475  TLIIAPLSVMSNWSQQAALHVK-NKYALRVLTYHGQGNTDLSPKQLKEYDIVVTTYQTMT 533

Query: 673  AEWGRRKKSP---------MMQVHWLRVMLDEGHTLGSSLNLTNKL-QMAISLTASNRWL 722
             E      S          +  + W R++LDEGH +    N   K+ Q A  L A +RW+
Sbjct: 534  RELFPAYTSEPLPTPAARGLFSLEWRRIVLDEGHQI---RNPKAKMSQAACKLAAQSRWV 590

Query: 723  LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
            LTGTP  N      SH+    KFL         + ++  ++RP +      R  LLQ L 
Sbjct: 591  LTGTPIVNNLKDLYSHV----KFLRLSGGLTELEIFNSTLIRPLKNGENNAR-LLLQALV 645

Query: 783  RCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
              +   R  D++ I L + E+TF  +  +      E     R           S  + LL
Sbjct: 646  STLCLRRMKDMKFIDLKLPEITFHKYAIKFLPHEQERYEAFR-----------SEAKGLL 694

Query: 843  NPKQWKFRSTTIRNL-------RLSCC---VAGHIKVTDAGEDIQE-------------T 879
               + +    T+ +L       R +C    + G  +V    E I+E             T
Sbjct: 695  ETAKTRKGDKTMTHLLEVLLRLRQTCNHWKMCGEERVKKLLELIEEGTVADVMNPANRKT 754

Query: 880  MDVLVENGLDPLSQEYAFIKYNLLNGG--NCLRHILCLDCVAMDSE---KCSLPGCGFLY 934
            +  L++  +D  SQE   +  + L G       H+ C DC+    E   KC  P C    
Sbjct: 755  LQDLLQLQID--SQEDCCVCLDSLKGPVITACAHVFCRDCIQRVIETQRKC--PMC--RA 808

Query: 935  EMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD-K 993
            E+ + + L  P     +     D ++L           T  K +     L++++A PD K
Sbjct: 809  ELTNVDQLVEPAAGIGEG----DEVDLD-----IDPDTTSSKIEALVKILKASEADPDVK 859

Query: 994  VIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA- 1052
             ++FSQ+   + +++ QL   G++F  +   M+S+ +  +++    D SC  LL   S  
Sbjct: 860  TVVFSQWTSFLDLVQAQLVRHGLQFTRLDGKMNSAGRDAAIESLNSDPSCKILLASLSVC 919

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            S+GL+L    +V L +  W  ++E+Q + R HR+G TR   V  L + GT+E+++LE 
Sbjct: 920  SVGLNLVAANQVILADSWWAPAIEDQAVDRVHRLGQTRNCKVIRLVVEGTIEDEVLEI 977


>gi|449433265|ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Cucumis sativus]
 gi|449523563|ref|XP_004168793.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Cucumis sativus]
          Length = 1113

 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 244/568 (42%), Gaps = 87/568 (15%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
             TLIV P  L+  WK +++ H  P  + +FV     + +   +   YDVV+TT+  L++ 
Sbjct: 576  GTLIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRTNNPEVLLGYDVVLTTYGVLTSA 635

Query: 675  WGRRKK-SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
            +    + S   +V W RV+LDE HT+ SS   T   Q A +L +  RW LTGTP  N   
Sbjct: 636  YKSDGEFSIYHRVDWYRVVLDEAHTIKSS--KTQTAQAAFTLNSYCRWCLTGTPLQN--- 690

Query: 734  SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK--- 790
              L  L  +L FL  E +  N   W+  I RP+E     G   +  +L   M+   K   
Sbjct: 691  -NLEDLFSLLCFLRVEPWC-NWAWWNKLIQRPYENGDPRGLRLIKAILRPLMLRRTKDTN 748

Query: 791  ------------TDLQTIPLCIK---------------EVTFLNFTEEHAGTYN-----E 818
                        TD+QT+ +C +               +V F  F  +    +N     E
Sbjct: 749  DANGRPILVLPPTDIQTV-MCEQSEAEHDFYDALFKKSKVQFDQFVAQGKVLHNYANILE 807

Query: 819  LVVTVRR----NILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGE 874
            L++ +R+      L+    D S   + LN    KF  +   +  +         V D  E
Sbjct: 808  LLLRLRQCCNHPFLVMSRGD-SQQYANLNKLARKFLESNTNSTTMEQVAPTRAYVEDVVE 866

Query: 875  DIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFL- 933
             I+       EN   P+  E+A     +L       H +C +C+         P CGF  
Sbjct: 867  CIRRG-----ENTECPICLEFA--DDAVLTP---CAHRMCRECLL---SSWRTPTCGFCP 913

Query: 934  ---YEMQSPEILTRP-ENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKA 989
                 ++  E++T P E+P          ++++ ++++ S  +  L + L R NL  +  
Sbjct: 914  ICRQMLRKTELITCPSESPF--------RVDVEKNWKESSKVSKLL-ECLERINLLGSG- 963

Query: 990  LPDKVIIFSQ---FLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
              +K I+FSQ   F + + +  ++  +   +F G  S  H    +K     +     L  
Sbjct: 964  --EKSIVFSQWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLIS 1021

Query: 1047 LMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQ 1106
            L  G   +GL+L+  + VF+M+P W+ ++EEQ I R HR+G  R + V    ++ TVEE+
Sbjct: 1022 LKAG--GVGLNLTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRRVRVRRFIVKDTVEER 1079

Query: 1107 MLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            M    Q   R +R++   L   E   AR
Sbjct: 1080 M---QQVQARKQRMIAGALTDEEVRTAR 1104



 Score = 47.4 bits (111), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 7/97 (7%)

Query: 161 PCMKLKLFPHQQAAVEWMLHREWNAEVLR-----HPLY--IDLATEDGFYFYVNTVSGDI 213
           P +   L P+Q+ A+ WM   E   +V +     HP +    +  E     YVN  SG+ 
Sbjct: 449 PTLTCDLRPYQKQALFWMSELEKGIDVEKAAQTLHPCWSAYRICDERATSIYVNIFSGES 508

Query: 214 ATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQG 250
            T      +   GG+  D  GLGKT+  ++LIL   G
Sbjct: 509 TTKFPTATQMARGGILADAMGLGKTVMTIALILARMG 545


>gi|297795067|ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311253|gb|EFH41677.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1305

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 146/594 (24%), Positives = 249/594 (41%), Gaps = 78/594 (13%)

Query: 584  PKTLDNLAFDLAALRLALCEPLDSVRLYLSRA-TLIVVPSYLVDHWKTQIQQHVRPGQLH 642
            P   D LA D+ A +    E   ++ +  ++  TLI+ P  L+  WK +++ H +P  + 
Sbjct: 738  PGNEDGLAADVNADKRKRKESHTALTIVKAKGGTLIICPMALLSQWKDELETHSKPDTVS 797

Query: 643  LFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMM-QVHWLRVMLDEGHTLGS 701
            + V+    +         +DVV+TT+  L++ + +   + +  ++ W R++LDE HT+ S
Sbjct: 798  VLVYYGGDRTHDAKAIASHDVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKS 857

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
                T   +    L++  RW LTGTP  N    +L  L  +L FLH E +  N   W   
Sbjct: 858  WK--TQAAKATFELSSHCRWCLTGTPLQN----KLEDLYSLLCFLHVEPWC-NWAWWSKL 910

Query: 762  ILRPFEAEMEEGRSRLLQLLHRCMISARK---------------TDLQTIPLCIKEVTFL 806
            I +P+E     G   +  +L   M+   K               TD+Q I     E    
Sbjct: 911  IQKPYENGDSRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPTDIQVIECEQSEAERD 970

Query: 807  NFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGH 866
             +T     +  +    V +  ++ ++ +   +E LL  +Q              CC   H
Sbjct: 971  FYTALFKRSKVQFDQFVAQGKVLHNYAN--ILELLLRLRQ--------------CC--NH 1012

Query: 867  IKVTDAGEDIQETMDV------LVENGLDPLSQ---EYAFIKYNL--LNGGNCLRHILCL 915
              +  +  D Q+  D+       ++N  D +SQ     A+I+  +  L  GN     +CL
Sbjct: 1013 PFLVMSRADSQQYADLDSLARRFLDNNPDSVSQNAPSRAYIEEVIQDLRDGNSKECPICL 1072

Query: 916  D---------CVAMDSEKCSL-----PGCGFLYEMQSPEILTRPENPNPKWPVPQDLIEL 961
            +         C      +C L     P CG     ++  IL R E  +     P D I  
Sbjct: 1073 ESADDPILTPCAHRMCRECLLTSWRSPSCGLCPICRT--ILKRTELIS----CPTDSIFR 1126

Query: 962  QPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGM 1021
                + W  ++   +       ++ + +  +K I+FSQ+   + ++E  L   G +F   
Sbjct: 1127 VDVVKNWKESSKVSELLKCLEKIQKSGS-GEKSIVFSQWTSFLDLLEIPLRRKGFEFLRF 1185

Query: 1022 YSPMHSSNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVI 1080
               +    + K L  F        LLM   A  +GL+L+  + VFLM+P W+ ++EEQ I
Sbjct: 1186 DGKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAI 1245

Query: 1081 SRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
             R HR+G  R + V    ++ TVEE+M    Q   R +R++   L   E   AR
Sbjct: 1246 MRIHRIGQKRTVFVRRFIVKDTVEERM---QQVQARKQRMIAGALTDEEVRSAR 1296



 Score = 43.9 bits (102), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 12/103 (11%)

Query: 156 AASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLR-----HPLY--IDLATEDGFYFYVNT 208
           A S + C    L P+Q+ A+ WM   E   +V +     HP +    +  E     Y+N 
Sbjct: 636 APSTLTC---NLRPYQKQALYWMSESEKGIDVEKAAETLHPCWEAYRICDERAPSIYLNI 692

Query: 209 VSGDIATGTAPTMRDF-HGGMFCDEPGLGKTITALSLILKTQG 250
            SG+ AT   PT      GG+  D  GLGKT+  ++LIL   G
Sbjct: 693 FSGE-ATIQFPTATQMARGGILADAMGLGKTVMTIALILARPG 734


>gi|281202078|gb|EFA76283.1| RUN domain-containing protein [Polysphondylium pallidum PN500]
          Length = 1467

 Score =  120 bits (302), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 140/581 (24%), Positives = 247/581 (42%), Gaps = 97/581 (16%)

Query: 612  LSRATLIVVPSYLVDHWKTQIQQHVRP-GQLHLFVWTD-HKKPSAHSLAWD-YDVVITT- 667
            L + TL++ P  ++ +W+ ++ + V+   +L ++V+   H+K   H L ++ YD+VIT+ 
Sbjct: 930  LPKTTLVICPPNIISNWENELNKFVKKESRLKVYVYNGPHRK--KHILDFENYDIVITSH 987

Query: 668  ----FNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
                 +  + E G  K +P+ Q HW RV++DE     +   +    Q   +L A NRW L
Sbjct: 988  VIFGLDYKAFEKGNAKTAPLNQSHWWRVIIDEAQVCKTKTLIFKATQ---TLRAINRWCL 1044

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            +GTP  N     +  + P L FL       + KAW   I RP +  +   RS L  +L R
Sbjct: 1045 SGTPVQN----YVEEMFPHLNFLGVHPVATDIKAWRKYIERPKDVPL--LRSTLKPILLR 1098

Query: 784  CMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVT---------VRRNILMADWND 834
                    DL   P    E+  LNF+ E    Y E+V           +R+ I++ ++  
Sbjct: 1099 RTKENVGIDL---PPKTVEIVRLNFSPEEEEYY-EIVFQEASDLFTRLLRQGIVLKNYG- 1153

Query: 835  PSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQE 894
                                + LRL  C      +    E++ E  ++ +     P    
Sbjct: 1154 ----------------CVLAQLLRLRQCCDHRSLLFQKKENLDENYEMCMICEDIP---- 1193

Query: 895  YAFIKYNLLNGGNCLRHILCLDCV----------AMDSEKCSLPGCGFLYEMQ--SPEIL 942
                 Y + N      H+ C DCV            D  KC  P C F  ++Q  S E++
Sbjct: 1194 ----AYPIRN--KTCEHVFCYDCVTNLVEQERELGNDHPKC--PNCDFNGDIQLNSQELM 1245

Query: 943  --------------TRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNK 988
                          T     N K     ++   QP     S   T L + +   N   +K
Sbjct: 1246 EVQGMKAEDARHTGTNRVARNKK--SAGNVKSEQPDVMVPSTKLTLLMEQI---NETLSK 1300

Query: 989  ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYS----PMHSSNKIKSLDMFRHDASCL 1044
                K++IFSQ+   +  IE+         +G Y      M +  K  +L+ F+ +   +
Sbjct: 1301 EKGAKIVIFSQWTTMLDRIEEIFVENRWSESGKYERFDGKMSAKQKKAALENFQMEGGPV 1360

Query: 1045 ALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTV 1103
             +L+   A  +G++L+   +VFL++P W+ + E Q I R HR+G T+P+ V+ L +  ++
Sbjct: 1361 VMLISLKAGGVGINLTRANKVFLVDPWWNVAAENQAIDRLHRIGQTKPVTVKKLIITRSI 1420

Query: 1104 EEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAE 1144
            EE++LE  +  +   + + ++   P +E  + + ++ D  +
Sbjct: 1421 EERILELQETKEVMTQAILDDNYDPSKEIRKYNLSVEDLKK 1461



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 4/99 (4%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHP----LYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           L PHQ+  + WM HRE N EV  +      +      D   FY NT S  I+     T  
Sbjct: 819 LKPHQREGLWWMTHRERNPEVTFNATLNTYWKRFMFLDNTPFYYNTYSDKISLFAPVTEN 878

Query: 223 DFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKI 261
              GG+ CD+ GLGKT+T++ LI+      +  P   +I
Sbjct: 879 SISGGLLCDDMGLGKTLTSICLIMANHPKYSSHPQHQEI 917


>gi|319411618|emb|CBQ73662.1| probable RAD16-nucleotide excision repair protein [Sporisorium
            reilianum SRZ2]
          Length = 1070

 Score =  120 bits (301), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 142/597 (23%), Positives = 249/597 (41%), Gaps = 117/597 (19%)

Query: 594  LAALRLALCEPLDSVRLYLS---RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK 650
            + A  + + + +  + L LS   +  L+V P+  +  W+ +I+++  P QL + +W    
Sbjct: 478  MLADEMGMGKTIQMISLMLSDRKKPCLVVAPTVAIMQWRNEIEKYTEP-QLKVLLWHGPN 536

Query: 651  KPSAHSLAWDYDVVITTFNRLSA-----EWGRRKKSPMMQ-------VHWLRVMLDEGHT 698
            +          DVV+T++  L +     E G R+K+ +++       VHW R++LDE H 
Sbjct: 537  RTQNLKELKAVDVVLTSYAVLESSFRKQESGFRRKNEILKEKSALHAVHWRRIILDEAHN 596

Query: 699  LGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYG------ 752
            +      TN  + A +L    RW L+GTP  N    ++  L  M++FL  + +       
Sbjct: 597  IKE--RSTNTAKGAFALQGDFRWCLSGTPLQN----RVGELYSMIRFLGGDPFAYYFCKK 650

Query: 753  ------------------------QNQKAWDGGILRPFE---AEMEEGRS---RLLQLLH 782
                                     +   W+  IL+P +   A+  EGR    RL  LL 
Sbjct: 651  CPCKSLHWSFSDKRNCDMCGHTPMHHTCYWNNEILKPIQRSGAQQGEGRDAFRRLRILLE 710

Query: 783  RCMISARKTDLQT-----IPLCIKEVTFLNFTEEHAGTYNELVV-TVRRNILMAD----W 832
            R M+  R+T L+      +P    EV    F EE    Y  L   T R+     D     
Sbjct: 711  RMML--RRTKLERADDMGLPPRTIEVRRDLFNEEEEDLYTSLYTDTTRKFSTYLDQGTVL 768

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQE--TMDVLVENGLDP 890
            N+ S++ +LL  +  +  +     LR    VA  +     GED  E     +  +   D 
Sbjct: 769  NNYSNIFTLLT-RMRQLANHPDLVLRSKTGVASKL----LGEDQSEIHVCRICTDEAEDA 823

Query: 891  LSQEYAFIKYNLLNGGNCLRHILCLDCVA--MDSE--KCSLPGCGFLYEMQSPEILTRPE 946
            +                C +HI C +CV   +DSE     +P C + +   S ++     
Sbjct: 824  IM-------------SRC-KHIFCRECVRQYLDSEIEPGMVPDCPYCHATLSIDLEAEAL 869

Query: 947  NPNPKWPVPQDLIELQPSYRQ----------WSNTNTF--LKQDLYRPNLESNKALPDKV 994
             P      PQ  I +  S RQ          W ++     L ++L +   E       K 
Sbjct: 870  EP------PQSSIRMNDSGRQGILARLDMDKWRSSTKIEALVEELTQLRSEDKTI---KS 920

Query: 995  IIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSAS 1053
            ++FSQF+  + +I  +L  AG +   +   M    + +++  F  +      L+   +  
Sbjct: 921  LVFSQFVNFLDLIAFRLQRAGFQICRLEGNMSPEARNRTIKHFMENPGVTVFLVSLKAGG 980

Query: 1054 LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + L+L+  +RV+LM+P W+ S+E Q + R HR+G  RPI V+ + +  ++E +++E 
Sbjct: 981  VALNLTEASRVYLMDPWWNPSVEVQAMDRIHRLGQHRPIIVKRMVIENSIESRIIEL 1037


>gi|395334840|gb|EJF67216.1| hypothetical protein DICSQDRAFT_45634 [Dichomitus squalens LYAD-421
            SS1]
          Length = 926

 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 241/555 (43%), Gaps = 80/555 (14%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK---PSAHSLAWDYDVVITTFNRL 671
            ATLIV P+ L+  W  ++Q+  +P  L + VW    +    +A       +VVIT++  L
Sbjct: 356  ATLIVAPTSLLTQWAEELQRSSKPDTLRVLVWHGMNRLDLDAAVDGEGATNVVITSYGTL 415

Query: 672  SAEWGRRKKSP--MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP 729
             +E  + +K P  + +V WLRV+LDE H   S  + T K   A  L A  RW +TGTP  
Sbjct: 416  VSEHAKHEKQPSSVFEVEWLRVILDEAHHCKSRTSKTAKAVYA--LRARRRWAVTGTPIV 473

Query: 730  NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISAR 789
            N    +L  L  +LKFL    +  N   +   I  PF A  +     ++Q++   ++  R
Sbjct: 474  N----RLEDLYSLLKFLDFTPWS-NYTFFRSFITLPFLAR-DRKAVEVVQIILESVLLRR 527

Query: 790  KTDL------QTIPLCIKEVTF--LNFTEEHAGTYNELVVTVRRNI-------LMADWND 834
            + D+      + + L  KEV    L F+      Y+ L +  +++        L++   +
Sbjct: 528  EKDMLDSDGKRIVQLPPKEVKVEKLEFSPLERKIYDSLYLDAKKDFEHLKEKGLVS--RN 585

Query: 835  PSHVESLLNPKQWKFRSTTIR-NLRL----------SCCVAGHIKVTD------AGEDIQ 877
             +H+ ++L     + R   +  NL L          S   +G I V +       GE++ 
Sbjct: 586  YTHILAML----MRLRRAVLHPNLVLSSGDGGLAPKSANGSGTIDVKELIQRFGEGENVV 641

Query: 878  ETMDVLVENGLDPLSQEYAF--IKYNLLNG----GNCLRHILCLDCVAMDSEKC------ 925
                V  E  L  L QE A   I ++++       NC+ H  C DC+    EKC      
Sbjct: 642  SDSKVYAEGVLANLGQEDAECPICFDVMETPTILPNCM-HQCCKDCIIAFIEKCREKGED 700

Query: 926  -SLPGCGFLYEMQSPEILTRPENPNP------KWPVPQDLIELQPSYRQWSNTNTFLKQD 978
               P C    E    EI+   +N N       + P P  +I  +  +R  +     + Q 
Sbjct: 701  GKCPTCSKGPESDLLEIVRSRQNSNEGAGDIQEAPAPT-VILRRNDFRSSTKLEALV-QH 758

Query: 979  LYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGI---KFAGMYSPMHSSNKIKSLD 1035
            L R     ++ L  + ++FSQF   + +I+  L   G+   +F G       +  +    
Sbjct: 759  LRRLR---DQDLCFRAVVFSQFTSFLDLIQIVLEREGLLWYRFDGSMDVKKRNEAVSGFK 815

Query: 1036 MFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
                +A  L + +  +  +GL+L+    VF+M+  W+ + E Q I R HR+G  + ++V 
Sbjct: 816  APTREAKVLIISLK-AGGVGLNLTNANHVFMMDCWWNAATENQAIDRVHRIGQEKTVYVT 874

Query: 1096 TLAMRGTVEEQMLEF 1110
               + GT+E ++L+ 
Sbjct: 875  HFIVSGTIEGRILQI 889


>gi|443897823|dbj|GAC75162.1| nucleotide excision repair protein RAD16 [Pseudozyma antarctica T-34]
          Length = 1046

 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 144/606 (23%), Positives = 251/606 (41%), Gaps = 135/606 (22%)

Query: 594  LAALRLALCEPLDSVRLYLS---RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK 650
            + A  + + + +  + L LS   +  L+V P+  +  W+ +I+Q+  P +L + +W    
Sbjct: 454  MLADEMGMGKTIQMISLMLSDRKKPCLVVAPTVAIMQWRNEIEQYTEP-KLKVLLWHGPN 512

Query: 651  KPSAHSLAWDYDVVITTFNRLSA-----EWGRRKKSPMMQ-------VHWLRVMLDEGHT 698
            +          DVV+T++  L +     E G R+K+ +++       VHW R++LDE H 
Sbjct: 513  RTQNLKELKAVDVVLTSYAVLESSFRKQESGFRRKNEILKEKSALHAVHWRRIILDEAHN 572

Query: 699  LGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYG------ 752
            +      TN  + A +L    RW L+GTP  N    ++  L  M++FL  + +       
Sbjct: 573  IKE--RSTNTAKGAFALQGDFRWCLSGTPLQN----RVGELYSMIRFLGGDPFAYYFCKK 626

Query: 753  ------------------------QNQKAWDGGILRPFE---AEMEEGRS---RLLQLLH 782
                                     +   W+  IL+P +   A+  EGR    RL  LL 
Sbjct: 627  CPCKSLHWSFSDKRNCDSCGHTPMHHTCYWNNEILKPIQRSGAQHGEGRDAFRRLRILLE 686

Query: 783  RCMISARKTDLQT-----IPLCIKEVTFLNFTEEHAGTYNELVV-TVRRNILMAD----W 832
            R M+  R+T L+      +P    EV    F EE    Y  L   T R+     D     
Sbjct: 687  RMML--RRTKLERADDMGLPPRTIEVRRDLFNEEEEDLYTSLYTDTTRKFSTYLDQGTVL 744

Query: 833  NDPSHVESLL-------NPKQWKFRSTTIRNLRLSCCVAGHIKV----TDAGEDIQETMD 881
            N+ S++ +LL       N      RS T    +L       I V    TD  ED      
Sbjct: 745  NNYSNIFTLLTRMRQLANHPDLVLRSKTGMASKLLGDAQSEIHVCRLCTDEAED------ 798

Query: 882  VLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAM----DSEKCSLPGCGFLYEMQ 937
                          A +         C +HI C +CV      D E  ++P C + +   
Sbjct: 799  --------------AIM-------SRC-KHIFCRECVRQYLDADIEPGAVPDCPYCHATL 836

Query: 938  SPEILTRPENPNPKWPVPQDLIELQPSYRQ----------WSNTNTF--LKQDLYRPNLE 985
            S ++ +    P      P+  I +  S RQ          W ++     L ++L +   E
Sbjct: 837  SIDLESEALEP------PESTIRMNDSGRQGILARLDMDKWRSSTKIEALVEELTQLRSE 890

Query: 986  SNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
             +K +  K ++FSQF+  + +I  +L  AG +   +   M    + +++  F  + +   
Sbjct: 891  -DKTI--KSLVFSQFVNFLDLIAFRLQRAGFQICRLEGNMSPEARNRTIKHFMENPNVTV 947

Query: 1046 LLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
             L+   +  + L+L+  +RV+LM+P W+ S+E Q + R HR+G  RPI V+ + +  ++E
Sbjct: 948  FLVSLKAGGVALNLTEASRVYLMDPWWNPSVEVQAMDRIHRLGQHRPIIVKRMVIENSIE 1007

Query: 1105 EQMLEF 1110
             +++E 
Sbjct: 1008 SRIIEL 1013


>gi|406602350|emb|CCH46059.1| putative ATPase/DNA helicase [Wickerhamomyces ciferrii]
          Length = 1152

 Score =  119 bits (299), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 249/575 (43%), Gaps = 97/575 (16%)

Query: 611  YLSRATLIVVPSYLVDHWKTQ-IQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD--VVITT 667
            Y  + TLIVVP+ L+  W+ + ++ +    ++ ++  T+  K   + L  +    VV+TT
Sbjct: 578  YAFKTTLIVVPTSLLSQWQDEFLKANNTDSKIIIYYGTESGKDLKNELCGENPPMVVLTT 637

Query: 668  FNRLSAEW-----------GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLT 716
            +  +  EW           G   K  +  V + RV+LDEGH + + +  T K      L 
Sbjct: 638  YGTIQHEWSKLVSYVKVEGGELPKLGLFSVRFFRVVLDEGHNIRNRMAKTTK--ACYDLQ 695

Query: 717  ASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE-----ME 771
            +S +WLLTGTP  N    +L  L  ++KFL  + +  N   W   +  PFE +     ++
Sbjct: 696  SSRKWLLTGTPIVN----RLDDLFALIKFLELQPWS-NISYWKTFVTVPFEIKNYKQALD 750

Query: 772  EGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHAGTYNELVV----TVRR 825
              +S L  +L R   + +K     + L  KEV    + F+ +    Y+  +     +VR 
Sbjct: 751  VVQSILEPILLRRTKNMKKDGKALVELPPKEVVIERIKFSPKEKALYDWFLARASSSVRA 810

Query: 826  NILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGED-------IQE 878
            +I   D         LL  K++      I  LR  CC   H+ + + G D        ++
Sbjct: 811  SIAKGD---------LL--KRYTTILVHILRLRQICC---HMDLINGGSDEMDEDLSSKQ 856

Query: 879  TMDVLVENGLDPLSQEY-----AFIKYNLLNGGNCLRHILCLDCV--AMDSEKCSLPGCG 931
              ++ + + L  +++ +       I  N+      +  + C  C    + +++ S   CG
Sbjct: 857  VTNIDIPDDLKKMTETFNPRDVGEIFNNIYKKFENIEDLECSICTNQPIPTDQLSFTECG 916

Query: 932  FLY------------EMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDL 979
              +            EM+  E L     PN +  +    + ++    + S T    +  +
Sbjct: 917  HPFCISCILEHCDYQEMKGNETLC----PNCRHQISSSKL-VKARKNELSITKNKFELSV 971

Query: 980  YRPNLESNK--------------ALPDKVIIFSQFLEHIHVIEQQLTVAG----IKFAGM 1021
            +  +L+S+K                 +KV++FSQF   + ++E++L +       KF G 
Sbjct: 972  FDNSLKSSKLNALLTHLRIIRDQTANEKVVVFSQFSTFLDIMERELQLEKGLTVFKFDGR 1031

Query: 1022 YSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVIS 1081
             S    SN +K     R   + L LL   +  +GL+L+  +R F+ +P W  S+E+Q I 
Sbjct: 1032 LSLNSRSNILKEFKEPRQGVTVL-LLSLKAGGVGLNLTHASRAFMCDPWWSPSIEDQAID 1090

Query: 1082 RAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            R HR+G    + V    M G++EE+ML+ +Q+  R
Sbjct: 1091 RIHRIGQESNVKVVRFIMEGSIEEKMLK-IQERKR 1124


>gi|429861015|gb|ELA35729.1| DNA repair protein rad5 [Colletotrichum gloeosporioides Nara gc5]
          Length = 799

 Score =  119 bits (299), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 134/533 (25%), Positives = 226/533 (42%), Gaps = 95/533 (17%)

Query: 615  ATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            ATL+VV S  L++ W ++IQ+HV    L+  V+    +P         ++V+TT+  L A
Sbjct: 286  ATLVVVSSAQLLESWGSEIQRHVLRECLNTIVFHGQSRPHDSKSLLKTNIVLTTYGTLVA 345

Query: 674  EWGRRKKSPMMQVHWLRVMLDEGHTLGSS-------------LNLTNKLQM--AISLTAS 718
            E   RK   + Q++W R++LDEG  L                +  TN  Q   A+ L+A 
Sbjct: 346  EEKGRKV--LQQLNWFRIVLDEGEFLDPPQYTQKHQQVVAHWIRNTNSRQFKSAVKLSAK 403

Query: 719  NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGR--SR 776
            NRW LTGTP  N    +L  +  +  FL    +   + ++   +L P     + GR  S 
Sbjct: 404  NRWCLTGTPIQN----RLEDIAALAGFLQLHPF-PTKISFQKSVLDPLS---QGGRNFSE 455

Query: 777  LLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPS 836
             L+   R +   R   L  +P   +E   ++ +      Y++++   +R I         
Sbjct: 456  PLRSWLRAVCIRRTGKLLQLPDTAEETILVSLSLAERILYDQVLHRTKREI-------DD 508

Query: 837  HVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYA 896
             V      K++ F  T I  +R+ C    +   + +                        
Sbjct: 509  TVSKGKTIKKYNFLFTAILKMRMLCNSGTYSNYSGS------------------------ 544

Query: 897  FIKYNLLNGGNCLRHILCLDCVAMDSEKCSL--------PGCGFLYEMQSPEILTRPENP 948
               +  L   + +++  C  C A   E  +L        P CG   ++ SP   + PE+ 
Sbjct: 545  ---HRYLRVDSQVKYTGCEQCAASKDEDATLLLAAFQFCPDCGRSLQISSPG--SNPESS 599

Query: 949  -NPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNL--ESNKALP----DKVIIFSQFL 1001
             +   P+P    E  P+  +      F   D+Y   L   +NK        K I+FS + 
Sbjct: 600  RDGNSPLP----EFYPTPEE-----RFTPSDVYSAKLFAVTNKIRACRSTSKHIVFSYWT 650

Query: 1002 EHIHVIEQQL---TVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLD 1057
              + ++   L    V  ++  G  S    +N+++S   FR D    ALLM   + +LGL+
Sbjct: 651  STLDLLSNLLGNEAVTHVQVDGRTSYAERTNRLQS---FREDNDICALLMSIETGALGLN 707

Query: 1058 LSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            L+    V ++EP W+ S+EEQ I RA R+G TR + V    ++GTVE+ +++ 
Sbjct: 708  LTAANYVHIVEPQWNPSIEEQAIGRALRIGQTREVTVVRYIVQGTVEQNIMQL 760


>gi|356503369|ref|XP_003520482.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Glycine max]
          Length = 823

 Score =  119 bits (299), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 146/601 (24%), Positives = 263/601 (43%), Gaps = 65/601 (10%)

Query: 537  LSEMETTGLASPILGSYAAGETQGFHKIFQAFGLI---RRVEKGITR-WYYPKTLDNLAF 592
            L++ ++     P+ G   A E  G  K      LI   ++ + G+++ W   + +  L  
Sbjct: 227  LTDYQSDNRPDPLRGGIFADEM-GLGKTLTLLSLIAFDKKSQMGVSKKWRTDRKVVTLEK 285

Query: 593  DLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP 652
                      E     + + + ATL+V P  ++  W TQ+++H  PG L  +++   ++ 
Sbjct: 286  RRMRESENESESSSPEKGFRTNATLVVCPPSVMSTWITQLEEHTVPGALKTYMYYGERRT 345

Query: 653  SAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQ-M 711
                    YD+V+TT+  L+ E     K P   ++W R++LDE HT+ +     N LQ +
Sbjct: 346  DDPFDLNRYDLVLTTYGILAGEHCM-PKMPAKNMYWRRIVLDEAHTIKN----FNALQSL 400

Query: 712  AIS-LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEM 770
            A+S L A  RW +TGTP      S    L  ++ FL  + +   Q+ W   + R      
Sbjct: 401  AVSKLNAQCRWAVTGTPI----QSGCIDLFSIMVFLRFQPFSVRQQ-WRELVQRSLNKGK 455

Query: 771  EEGRSRLLQLLHRCMISARKTDLQTIPLCIK--EVTFLNFTEEHAGTYNELVVTVRRNIL 828
            ++G  RL Q+L   +   R  D+  + L  K  E+ ++  + +    Y++L    +  I 
Sbjct: 456  DKGLVRL-QILMEAIALRRTKDMTLVGLPPKTIEICYVELSFDERQMYDQLKQDTK--IF 512

Query: 829  MADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGE-DIQETMDVLVENG 887
            ++ +   +H +SL+ P      S  +R LR  C        TD+   ++Q  +   +E+ 
Sbjct: 513  LSRY---AHDDSLV-PHYSAVLSRILR-LRQIC--------TDSKLWNVQSLLLTNIEDA 559

Query: 888  LDPLSQEYAFIKYNLLNGGNCLRHILCLDC-VAMDSEKCSLPGCGFLYEMQSPEILTRPE 946
             +      A +    +  G      +CL   + +   +C+   C          IL   +
Sbjct: 560  SNNPELLQALL--GQVQDGEDFDCPICLSPPIEIVITRCAHIFCRIC-------ILRALQ 610

Query: 947  NPNPKWPV------PQDLIELQP------SYRQWSNTNTFLKQD---LYRPNLESNKALP 991
            N NP  P+        DL    P      S  + S++ T L      L +   ES    P
Sbjct: 611  NKNPCCPLCRRRLKESDLFSAPPESSKVDSAGECSSSQTVLPSKVSTLIKLLTESRDQHP 670

Query: 992  D-KVIIFSQFLEHIHVIEQQLTVAGIK---FAGMYSPMHSSNKIKSLDMFRHDASCLALL 1047
              K ++FSQF + + ++E+ L  AG K     G  +  H +N I+       D   + L 
Sbjct: 671  AAKSVVFSQFRKLLLLMEEPLNAAGFKTLRLDGTMNAKHRANVIEQFQSQGIDGPTVLLA 730

Query: 1048 MDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
               ++S G++L+  +R++ MEP W+ ++EEQ + R HR+G    + +  L  + ++EEQ+
Sbjct: 731  SLRASSAGINLTSASRLYFMEPWWNHAVEEQAMDRVHRIGQKEAVKIVRLIAQNSIEEQI 790

Query: 1108 L 1108
            L
Sbjct: 791  L 791



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 10/83 (12%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           ++ +L  HQ+  + W++HRE N++ L  P +     E+    +VN ++ D  +   P   
Sbjct: 188 IRTELLQHQKEGLAWLVHRE-NSDDL-PPFW-----EENEGKFVNILT-DYQSDNRPD-- 237

Query: 223 DFHGGMFCDEPGLGKTITALSLI 245
              GG+F DE GLGKT+T LSLI
Sbjct: 238 PLRGGIFADEMGLGKTLTLLSLI 260


>gi|71018359|ref|XP_759410.1| hypothetical protein UM03263.1 [Ustilago maydis 521]
 gi|46098957|gb|EAK84190.1| hypothetical protein UM03263.1 [Ustilago maydis 521]
          Length = 1054

 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 140/596 (23%), Positives = 252/596 (42%), Gaps = 115/596 (19%)

Query: 594  LAALRLALCEPLDSVRLYLS---RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK 650
            + A  + + + +  + L LS   +  L+V P+  +  W+ +I+Q+  P +L + +W    
Sbjct: 462  MLADEMGMGKTIQMISLMLSDRKKPCLVVAPTVAIMQWRNEIEQYTEP-KLKVLMWHGAN 520

Query: 651  KPSAHSLAWDYDVVITTFNRLSA-----EWGRRKKSPMMQ-------VHWLRVMLDEGHT 698
            +          DVV+T++  L +     E G R+K+ +++       VHW R++LDE H 
Sbjct: 521  RTQDLKELKAADVVLTSYAVLESSFRKQESGFRRKNEILKERSALHAVHWRRIILDEAHN 580

Query: 699  LGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYG------ 752
            +      TN  + A +L    RW L+GTP  N    ++  L  M++FL  + +       
Sbjct: 581  IKE--RSTNTAKGAFALQGDFRWCLSGTPLQN----RVGELYSMIRFLGGDPFAYYFCKK 634

Query: 753  ----------QNQKA--------------WDGGILRPFE---AEMEEGR---SRLLQLLH 782
                       ++++              W+  IL+P +   A+  EGR    RL  LL 
Sbjct: 635  CTCKSLHWSFSDKRSCDSCGHTPMHHTCFWNNEILKPIQRSGAQHGEGRDAFQRLRILLE 694

Query: 783  RCMISARKTDLQT-----IPLCIKEVTFLNFTEEHAGTYNELVV-TVRRNILMAD----W 832
            R M+  R+T L+      +P    EV    F EE    Y  L   T R+     D     
Sbjct: 695  RMML--RRTKLERADDMGLPPRTIEVRRDLFNEEEEDLYTSLYTDTTRKFSTYLDQGTVL 752

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQE--TMDVLVENGLDP 890
            N+ S++ +LL  +  +  +     LR    +A  +     GED  E     +  +   D 
Sbjct: 753  NNYSNIFTLLT-RMRQLANHPDLVLRSKTGLASKL----LGEDQSEIHVCRICTDEAEDA 807

Query: 891  LSQEYAFIKYNLLNGGNCLRHILCLDCVA--MDSEKCS--LPGCGFLYEMQSPEILTRPE 946
            +                C +HI C +CV   +DSE     +P C + +   S ++     
Sbjct: 808  IM-------------SRC-KHIFCRECVRQYLDSELVPGMVPDCPYCHATLSIDLEAEAL 853

Query: 947  NPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD-----------KVI 995
             P      PQ  I +  S RQ     + L  D +R + +    + +           K +
Sbjct: 854  EP------PQSSIRMNDSGRQ--GILSRLDMDKWRSSTKIEALVEELTQLRSDDKTIKSL 905

Query: 996  IFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASL 1054
            +FSQF+  + +I  +L  AG +   +   M    + +++  F  +      L+   +  +
Sbjct: 906  VFSQFVNFLDLIAFRLQRAGFQICRLEGNMSPEARNRTIKHFMENPGVTVFLVSLKAGGV 965

Query: 1055 GLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             L+L+  +RV+LM+P W+ S+E Q + R HR+G  RPI V+ + +  ++E +++E 
Sbjct: 966  ALNLTEASRVYLMDPWWNPSVEVQAMDRIHRLGQHRPIIVKRMVIENSIESRIIEL 1021


>gi|255576850|ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
 gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16, putative [Ricinus communis]
          Length = 1051

 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 147/569 (25%), Positives = 244/569 (42%), Gaps = 89/569 (15%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
             TLIV P  L+  WK +++ H   G + +FV     + +   +   +DVV+TT+  L+A 
Sbjct: 514  GTLIVCPMALLGQWKDELETHSELGSISIFVHYGGFRTTDPRVISGHDVVLTTYGVLTAA 573

Query: 675  WGRR-KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
            +    + S   +V W R++LDE HT+ S    T   Q A  L++  RW LTGTP  N   
Sbjct: 574  YKSDLEHSIFHRVEWYRLVLDEAHTIKSWK--TMGAQAAFKLSSHCRWCLTGTPLQNN-- 629

Query: 734  SQLSHLQPMLKFLHEEAYGQ-------NQKAWDGG----------ILRPF------EAEM 770
              L  L  +L FLH E +          Q+ ++ G          ILRP       E + 
Sbjct: 630  --LEDLYSLLCFLHVEPWFNWAWWSKLIQRPYENGDPRGMKLIKAILRPLMLRRTKETKD 687

Query: 771  EEGRSRL------LQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYN-----EL 819
            +EGR  L      +Q++  C  S  + D         +V F  F  +    +N     EL
Sbjct: 688  KEGRPILVLPPMDIQIIE-CEHSEAEHDFYDALFRRSKVKFDQFVAQGKVLHNYASILEL 746

Query: 820  VVTVRRNILMADWNDPSHVESLLNPKQW--------KFRSTTIRNLRLSCCVAGHIKVTD 871
            ++ +R+       N P  V S  + KQ+        +F  T   +      V     + +
Sbjct: 747  LLRLRQCC-----NHPFLVLSRADSKQYTDLNKLARRFLETNADSAAREQTVPTPAYIEE 801

Query: 872  AGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSL---P 928
              EDI++      EN   P+  EYA     +L       H +C +C+       +    P
Sbjct: 802  VVEDIRKG-----ENNECPICMEYA--DDPVLTP---CAHRMCRECLLSSWRTPTTGLCP 851

Query: 929  GCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLK--QDLYRPNLES 986
             C  L  ++  ++LT P     +       + ++ ++++ S  +  L+  + + R +   
Sbjct: 852  ICRTL--LKKADLLTCPTENKFR-------VNVEENWKESSKVSKLLECLERIRRSDC-- 900

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
                 +K IIFSQ+   + ++E  L    I F      +    + ++L  F      + L
Sbjct: 901  ----GEKSIIFSQWTSFLDLLEIPLRRRAIGFLRFDGKLVQKQRERTLKEFNETKEKMVL 956

Query: 1047 LMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            LM   A  +GL+L+  + VFLM+P W+ ++EEQ I R HR+G  R + V    ++ T+EE
Sbjct: 957  LMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVTVRRFIVKDTLEE 1016

Query: 1106 QMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            +M    Q   R +R++   L   E   AR
Sbjct: 1017 RM---QQVQARKQRMIAGALTDEEVRSAR 1042


>gi|15239896|ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
 gi|60390960|sp|Q9FIY7.1|SM3L3_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3; Short=SMARCA3-like protein 3
 gi|10178192|dbj|BAB11616.1| DNA repair protein-like [Arabidopsis thaliana]
 gi|332007595|gb|AED94978.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
          Length = 1277

 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 144/567 (25%), Positives = 239/567 (42%), Gaps = 87/567 (15%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
             TLI+ P  L+  WK +++ H +P  + + V+    +         +DVV+TT+  L++ 
Sbjct: 742  GTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTTYGVLTSA 801

Query: 675  WGRRKKSPMM-QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
            + +   + +  ++ W R++LDE HT+ S    T   +    L++  RW LTGTP  N   
Sbjct: 802  YKQDMANSIFHRIDWYRIVLDEAHTIKSW--KTQAAKATFELSSHCRWCLTGTPLQN--- 856

Query: 734  SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK--- 790
             +L  L  +L FLH E +  N   W   I +P+E     G   +  +L   M+   K   
Sbjct: 857  -KLEDLYSLLCFLHVEPWC-NWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRTKETR 914

Query: 791  ------------TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHV 838
                        TD+Q I     E     +T     +  +    V +  ++ ++   + +
Sbjct: 915  DKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNY--ANIL 972

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDV------LVENGLDPLS 892
            E LL  +Q              CC   H  +  +  D Q+  D+       ++N  D +S
Sbjct: 973  ELLLRLRQ--------------CC--NHPFLVMSRADSQQYADLDSLARRFLDNNPDSVS 1016

Query: 893  Q---EYAFIKYNL--LNGGNCLRHILCLD---------CVAMDSEKCSL-----PGCGFL 933
            Q     A+I+  +  L  GN     +CL+         C      +C L     P CG  
Sbjct: 1017 QNAPSRAYIEEVIQDLRDGNSKECPICLESADDPVLTPCAHRMCRECLLTSWRSPSCGLC 1076

Query: 934  YEMQSPEILTRPENPNPKWPVPQDLI---ELQPSYRQWSNTNTFLKQDLYRPNLESNK-- 988
               ++  IL R E  +     P D I   ++  ++++ S  +  LK       LE  K  
Sbjct: 1077 PICRT--ILKRTELIS----CPTDSIFRVDVVKNWKESSKVSELLK------CLEKIKKS 1124

Query: 989  ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM 1048
               +K I+FSQ+   + ++E  L   G +F      +    + K L  F        LLM
Sbjct: 1125 GSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLM 1184

Query: 1049 DGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
               A  +GL+L+  + VFLM+P W+ ++EEQ I R HR+G  R + V    ++ TVEE+M
Sbjct: 1185 SLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERM 1244

Query: 1108 LEFLQDTDRCRRLLKEELVKPEREGAR 1134
                Q   R +R++   L   E   AR
Sbjct: 1245 ---QQVQARKQRMIAGALTDEEVRSAR 1268



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 14/124 (11%)

Query: 156 AASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLR-----HPLY--IDLATEDGFYFYVNT 208
           A S + C    L P+Q+ A+ WM   E   +V +     HP +    +  E     Y+N 
Sbjct: 608 APSTLTC---NLRPYQKQALYWMSESEKGIDVEKAAETLHPCWEAYRICDERAPSIYLNI 664

Query: 209 VSGDIATGTAPTMRDF-HGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHN 267
            SG+ AT   PT      GG+  D  GLGKT+  ++LIL   G     P+   ++    N
Sbjct: 665 FSGE-ATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGR--GNPENEDVLVADVN 721

Query: 268 GDPR 271
            D R
Sbjct: 722 ADKR 725


>gi|340960103|gb|EGS21284.1| helicase-like protein [Chaetomium thermophilum var. thermophilum DSM
            1495]
          Length = 901

 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 244/532 (45%), Gaps = 78/532 (14%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAW---DYDVVITTFNRL 671
            +TLIV P  ++ +W+ QI++HV   + H+     +   + H+LA    D  +VIT++  L
Sbjct: 377  STLIVAPVGVMSNWEQQIRRHV--AKEHIPSVVIYHGGNRHTLAESLKDQKIVITSYGTL 434

Query: 672  SAE--WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP 729
            S++  +G     P+ ++ W RV+LDE H++ +    TN    A +L+A +RW LTGTP  
Sbjct: 435  SSDTIYG-----PLSKIQWRRVVLDEAHSIRNPK--TNAALAACALSAKSRWALTGTPIV 487

Query: 730  NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSR---LLQLLHRCMI 786
            N     +   Q +LKFL      +  + ++  I RP    +  G +R   LLQ L + + 
Sbjct: 488  NN----IKDFQSLLKFLRITGGLEQSEIFNAVIARP----LSYGDARAEALLQALIKDIC 539

Query: 787  SARKTDLQTIPLCIKEVT----FLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
              R+ D+  + L +   T     + F  E    Y  L+   +  +      +     SLL
Sbjct: 540  LRRRKDMNFVDLRLPPKTEYIHRIAFWPEEKKKYGALLAEAQGAL------EEYQNRSLL 593

Query: 843  NPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQE-------- 894
              K  +F+S   R LRL   +  H  +    E I + M +L E  + PL+ E        
Sbjct: 594  GQK-VRFQSVLERLLRLRQ-ICNHWALCK--ERINDLMKLLEEQDVVPLTPENRRLLQEA 649

Query: 895  -YAFIK--------YNLLNG---GNCLRHILCLDCVAMD---SEKCSLPGCGFLYEMQSP 939
               FI+        Y+++      +C +H  C  C+        KC  P C    E+   
Sbjct: 650  LQLFIESQDECPVCYDVMIDPVITHC-KHPFCRKCITKVIKLQHKC--PMCR--AELSED 704

Query: 940  EILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQ 999
            +++    +P P+    ++   L    +  S     LK  + +  L+++++   KVIIFSQ
Sbjct: 705  KLI----DPPPEHSAEEEKKTLDTEAKS-SKIEALLK--ILQATLKNDQS---KVIIFSQ 754

Query: 1000 FLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDL 1058
            +   + +I++QL  AG  +  +   M +  +  ++    +D     +L   S  S+GL+L
Sbjct: 755  WTSFLTIIQRQLDEAGYTYVRLDGSMSTGQRDAAVRALDNDPKTRIMLASLSVCSVGLNL 814

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
                 V L +  W  ++E+Q + R HR+G TRP  V  L M  +VEE++L+ 
Sbjct: 815  VAADTVILADSWWAPAIEDQAVDRVHRLGQTRPTTVWRLVMENSVEERVLDI 866



 Score = 43.1 bits (100), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 10/106 (9%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLR--HPLYIDLATEDGFYFYVNTVSGDIATGTAPT 220
           +K +L P+Q   + W+  +E N        P  + L   D    YVN ++ +   GT P 
Sbjct: 290 LKAQLLPYQLQGLAWLREKE-NPTFPEPGSPDSVQLWKRDAQGRYVN-LATNFTVGTPPD 347

Query: 221 MRDFHGGMFCDEPGLGKTITALSLILKTQG---TLADPPDGVKIIW 263
           +    GG+  D+ GLGKT+  +SLI+ T G   TL   P GV   W
Sbjct: 348 L--LSGGILADDMGLGKTLQIISLIM-TGGEGSTLIVAPVGVMSNW 390


>gi|340382187|ref|XP_003389602.1| PREDICTED: transcription termination factor 2-like [Amphimedon
            queenslandica]
          Length = 1008

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 218/513 (42%), Gaps = 69/513 (13%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            + ATL+V P  L+  W+ +I+  +  G L +F +   K+P    +  DYDVVITT++ + 
Sbjct: 501  TEATLVVAPLTLLSIWENEIESKLYSGNLSVFRYHGPKRPKDPRVLIDYDVVITTYDIIG 560

Query: 673  AEW----------GRRKKSP---MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
             E           G+ K+S    +  +HW R++LDE H + +  + T+  +   SL A  
Sbjct: 561  MEGNAINAATDTSGKAKRSAHPTLFHIHWKRIILDEAHIIRNPKSATS--EGCCSLDADY 618

Query: 720  RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS---R 776
            RW LTGTP  N    +L     ++KFLH   +  + + W   I         EGR+   +
Sbjct: 619  RWALTGTPIQN----KLKDFYSLIKFLHVAPF-DDLRVWKDTI---------EGRNLGMK 664

Query: 777  LLQLLHRCMISAR-KTDLQTIPLCIKEVT--FLNFTEEHAGTYNELVVTVRRNILMADWN 833
             LQ +  C++  R K + ++  L  K V    L    E    YN ++    R+  M    
Sbjct: 665  RLQAMVSCLVLRRLKEEFESTKLPAKNVVCHKLALNPEERSIYN-VLFHFSRDFFMKYLT 723

Query: 834  DPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQ 893
            +    + L  P      S+ +        V  H++   + E + E+M   +E  ++   +
Sbjct: 724  ELGEFDML--PDSAPSLSSLLHK------VPSHLR--SSVETLMESMIPNIEE-MEGQRR 772

Query: 894  EYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWP 953
              + I   LL    C  H   L   A+ SE  +           S    + P+       
Sbjct: 773  SGSMILLLLLRLRQCCNHPNLL-STALTSEVLAEDDLALAMGALSIGATSEPK------- 824

Query: 954  VPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTV 1013
              QDL          S  +   K D    N + N+ LP+K II SQ+   +H+IE  LT+
Sbjct: 825  --QDL----------SVQSIITKLDEIFSNEDPNEPLPNKCIIVSQWTSMLHIIEHHLTL 872

Query: 1014 AGIKFAGMYSPMHSSNKIKSLDMFRHDASC--LALLMDGSASLGLDLSFVTRVFLMEPIW 1071
            + I    +   +   ++  ++D F   +    + LL   +  +GL L+    VF+ +  W
Sbjct: 873  SNISCTKIDGKVPLKDRHANIDAFNRKSPNPRVMLLSLQAGGVGLTLTAANHVFITDLHW 932

Query: 1072 DRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            +  +E+Q   R HR+G TR + +       TVE
Sbjct: 933  NPQLEQQASDRCHRVGQTRTVTIHRFMTENTVE 965


>gi|302883508|ref|XP_003040654.1| hypothetical protein NECHADRAFT_79818 [Nectria haematococca mpVI
            77-13-4]
 gi|256721542|gb|EEU34941.1| hypothetical protein NECHADRAFT_79818 [Nectria haematococca mpVI
            77-13-4]
          Length = 895

 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 123/525 (23%), Positives = 215/525 (40%), Gaps = 40/525 (7%)

Query: 628  WKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVH 687
            W+  I++H+ P QL + ++    +        ++D+++TT+  L ++W    K P+    
Sbjct: 377  WQNDIEKHIHPSQLSVAIYHGADRGRLAKHFRNHDIILTTYQTLRSDWA--AKGPLFSEE 434

Query: 688  WLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
            W RV+LDE H +G+    T   + A  L    RW LTGTP  NT    L +   +L FL 
Sbjct: 435  WFRVVLDEAHHIGN--RSTQIFRAACDLNCLRRWCLTGTPIQNT----LDNYGALLSFLR 488

Query: 748  EEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDL---QTIPLCIKEVT 804
               + +  K +D  I  P   E   G ++L  L+    +   K  +     +P   +++ 
Sbjct: 489  IPLFVEKSK-FDHWISNPVRDERPHGLTKLRILVQATCLRRTKRSISHSHKLPNRTEKIE 547

Query: 805  FLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVA 864
             ++        Y        R I      D S+V S  +    K     I  LR  C   
Sbjct: 548  RVDLNPNDRELYKFFSAIATR-IASGSSEDESNVRS-TDKNGNKNVLPIINFLRRICNHG 605

Query: 865  GHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCV--AMDS 922
              +    A E  +     L+++ +     +   + +  L+  +    +LC  C+     S
Sbjct: 606  EDLLPASAAEAWKLKQSGLMDSQMAQFPGDSCALCHGDLHSASG--SLLCAICLLARQGS 663

Query: 923  EKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRP 982
            E    PG   +   Q  E  T P +P+ K         ++   R   N            
Sbjct: 664  EPTETPGSSRVESPQG-ETPTSPHHPSAK---------VEALIRNLGNEQV--------E 705

Query: 983  NLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS 1042
            N   ++A P K ++FS + + + +++     +G  +  +        + +++  F ++ +
Sbjct: 706  NQNGSEARPVKSVVFSYWTKMLDLVQIAFRQSGYSYERIDGQSSLRQRHRAMSKFNNNPA 765

Query: 1043 CLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRP-IHVETLAMR 1100
            C  LL   GSA  G+DL+    V LMEP W+   EEQ I+R HR+G  RP I  + +  R
Sbjct: 766  CTVLLATIGSAGEGIDLTAANHVHLMEPHWNPMAEEQAIARVHRIGQRRPVIATKYITPR 825

Query: 1101 GTVEEQMLEFL--QDTDRCRRLLKEELVKPEREGARSHRTLHDFA 1143
               E   L  L  +D D     + + +++ ++E     R   DFA
Sbjct: 826  SIEEVGYLSTLNNRDFDPANGSINQYVLEMQKEKLALSRKALDFA 870


>gi|426201379|gb|EKV51302.1| hypothetical protein AGABI2DRAFT_197195 [Agaricus bisporus var.
            bisporus H97]
          Length = 1106

 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 136/563 (24%), Positives = 225/563 (39%), Gaps = 100/563 (17%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSL---AWDYD----VVITT 667
             TLIV P+ L+  W  +IQ+  +   L + +W  H +     L   A D D    VVIT+
Sbjct: 537  GTLIVAPASLLAQWAEEIQRSSKSNTLEVIIWHGHNRLDLDVLVNSAGDQDRMPKVVITS 596

Query: 668  FNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            +  L++E  +   SP+  ++WLR++LDE H   S ++ T K      L A  RW +TGTP
Sbjct: 597  YGTLASEHAK-TMSPLFDIYWLRIVLDEAHACKSRMSKTAK--AVYDLRAKWRWAVTGTP 653

Query: 728  TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
              N    +L  L  +LKFL  E + +    +   I  PF A   +    +  +L   ++ 
Sbjct: 654  IVN----KLEDLFSLLKFLKHEPWSE-YAYFRSFITLPFLARDPKAIEVVQVILENALLR 708

Query: 788  ARKTDL-----QTIPLCIKEVTF--LNFTEEHAGTYNELVVTVRRN-------------- 826
              K  L     + + L  KE+T   L F+      Y+ + + V+RN              
Sbjct: 709  REKNMLDIDGKRIVELPPKEITIEALEFSSLEKKIYDSIWLKVKRNFDQLEAKGLVGKNY 768

Query: 827  -----ILMA---------------DWNDPSHVESLLNP----KQWKFRSTTIRNLRLSCC 862
                 +LM                D N  S+ +SL NP    +      T+  N   +  
Sbjct: 769  THILAMLMKLRRAVLHPDLVLEKEDSNSGSNAQSLDNPAINLEDLVKNLTSNSNGGSNAA 828

Query: 863  VAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDS 922
             A  +    A EDI E           P+  +   +   +L       H  C DC+    
Sbjct: 829  FAEGVLANLADEDITEC----------PICFDVMDVPTMILGCA----HQCCKDCILTHI 874

Query: 923  EKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIEL---QPSYRQWSNTNTFLKQDL 979
              C   G       Q P        P      P DL+E+   +P+  Q S +    + D+
Sbjct: 875  ATCEEKG-------QQPNCFACGRGPIN----PSDLVEVIRKEPTNSQPSASVALRRNDV 923

Query: 980  YRPN-----LESNKALPD-----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSN 1029
                     L+  + L +     + ++FSQF   + +I+  L   G  F      M    
Sbjct: 924  RSSTKLEALLKHLRRLKEEDPKFRAVVFSQFTSFLDLIQVMLQREGYDFCRFDGTMDVKK 983

Query: 1030 KIKSLDMFRHDASCLALLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMG 1087
            +  +L  F+  +    +L+    +  +GL+L+    VF+M+  W+ + E Q I R HR+G
Sbjct: 984  RSAALSAFKSPSKQPRILIISLKAGGVGLNLTTANHVFMMDCWWNAATENQAIDRVHRIG 1043

Query: 1088 ATRPIHVETLAMRGTVEEQMLEF 1110
              + +HV    +  T+E ++L+ 
Sbjct: 1044 QDKTVHVTHFIISNTIEGRILQI 1066


>gi|156847675|ref|XP_001646721.1| hypothetical protein Kpol_1023p32 [Vanderwaltozyma polyspora DSM
            70294]
 gi|156117401|gb|EDO18863.1| hypothetical protein Kpol_1023p32 [Vanderwaltozyma polyspora DSM
            70294]
          Length = 1178

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 159/650 (24%), Positives = 261/650 (40%), Gaps = 113/650 (17%)

Query: 540  METTGLASPILGSYAAGETQGFHKIFQAFGLI-----RRVEKGITRWYYPKTLDNLAFDL 594
            ME   L S + G   + E  G  K       I      R EK     +  +   N +FD 
Sbjct: 532  MEKPTLKSLVKGGILSDEM-GLGKTISTLATIFSAPFDREEKNHNELFIKERTTNNSFDS 590

Query: 595  AALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA 654
              +    C+P      Y  R TL+VVP+ L+  W ++ ++      ++  ++      S 
Sbjct: 591  EII----CKP------YAYRTTLVVVPTSLLMQWSSEFEKSKNGDDIYSEIYYGGNVTSL 640

Query: 655  HSLAWDYD----VVITTFNRLSAEWGRRKK---------SPMMQVHWLRVMLDEGHTLGS 701
             SL          V TT+  +  EW R  K         S +  V + R++LDEGH + +
Sbjct: 641  KSLLTKTKNPPTAVFTTYGIVQNEWTRISKNTSNNSEALSGLFSVQFFRIVLDEGHIIRN 700

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
               +T+K  M  +L++  +W+LTGTP  N    +L  +  ++KFL  E + Q    W   
Sbjct: 701  RSTITSKAIM--NLSSKRKWILTGTPIIN----RLDDIYSLVKFLGLEPWSQ-IGYWKSF 753

Query: 762  ILRPFE-AEMEEGRSRLLQLLHRCMISARK--TDLQTIPLC---IKEVTFLNFTEEHAGT 815
            +  PFE  + +     +  +L   ++   K   D+   PL    +KE+ F+   E  A  
Sbjct: 754  VSEPFEKKDFKSAFDVVNSILSPVLLRRTKQMKDIDGKPLVELPLKEI-FIEDIELSA-- 810

Query: 816  YNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTT---IRNLRLSCCVAGHIKVTDA 872
               L   V +  L  D  + S  E L +    K  ST    I  LR  CC    +   D 
Sbjct: 811  ---LQNKVYKYFL--DRAESSVREGLAHGDLLKKYSTILVHILRLRQICCDVRLLGTKDD 865

Query: 873  GEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLP--GC 930
             ++   + + +V + +D        +   L +  +  R+ L  D +   S+K  L     
Sbjct: 866  NDEDVNSNNQVVSDSVD--------VNKILKDLKHTTRNALNQDEITELSDKIQLKYFEN 917

Query: 931  GFLYEMQSPEILTRPENPNP-------------------KWPVPQDLIELQPSYRQWSNT 971
            G L   + P   T P + N                     + V + L    P+ RQ  +T
Sbjct: 918  GKLKSNECPICTTEPIDANNIIFTECGHCFCESCLQEYFDFQVQKKLETKCPNCRQIIST 977

Query: 972  NTFLKQ----------DLYRPNLESNK--------------ALPDKVIIFSQFLEHIHVI 1007
            N  LK           +LY P  +S K              +  ++++IFSQF  ++ ++
Sbjct: 978  NRVLKLNHDTVENEPIELYCPTQKSAKIEALLKHLKVIQDQSAGEQIVIFSQFSSYLDIL 1037

Query: 1008 EQQLTVA-------GIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSF 1060
            EQ L  A         KF G  S    S  +K           + LL   +  +GL+L+ 
Sbjct: 1038 EQDLNEALSTKETIIYKFDGRLSLKERSTVLKEFTTKDLTKQKILLLSLKAGGVGLNLTC 1097

Query: 1061 VTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             +  F+M+P W  SME+Q I R HR+G +  + V    ++G++EE+ML+ 
Sbjct: 1098 SSHAFMMDPWWSPSMEDQAIDRIHRIGQSSNVKVVRFIVQGSIEEKMLKI 1147


>gi|409083582|gb|EKM83939.1| hypothetical protein AGABI1DRAFT_67033 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1106

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 136/567 (23%), Positives = 225/567 (39%), Gaps = 108/567 (19%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSL---AWDYD----VVITT 667
             TLIV P+ L+  W  +IQ+  +   L + +W  H +     L   A D D    VVIT+
Sbjct: 537  GTLIVAPASLLAQWAEEIQRSSKSNTLEVIIWHGHNRLDLDVLVNSAGDQDRMPKVVITS 596

Query: 668  FNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            +  L++E  +   SP+  ++WLR++LDE H   S ++ T K      L A  RW +TGTP
Sbjct: 597  YGTLASEHAK-TMSPLFDIYWLRIVLDEAHACKSRMSTTAK--AVYDLRAKWRWAVTGTP 653

Query: 728  TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
              N    +L  L  +LKFL  E + +    +   I  PF A   +    +  +L   ++ 
Sbjct: 654  IVN----KLEDLFSLLKFLKHEPWSE-YAYFRSFITLPFLARDPKAIEVVQVILENALLR 708

Query: 788  ARKTDL-----QTIPLCIKEVTF--LNFTEEHAGTYNELVVTVRRN-------------- 826
              K  L     + + L  KE+T   L F+      Y+ + + V+RN              
Sbjct: 709  REKNMLDIDGKKIVELPPKEITIEALEFSSLEKKIYDSIWLKVKRNFDQLEAKGLVGKNY 768

Query: 827  -----ILMA---------------DWNDPSHVESLLNP--------KQWKFRSTTIRNLR 858
                 +LM                D N  S+ + L NP        K     S    N+ 
Sbjct: 769  THILAMLMKLRRAVLHPDLVLEKEDSNGSSNAQPLDNPAINLEDLVKNLTSNSNGGSNVA 828

Query: 859  LSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCV 918
             +  V  ++    A EDI E           P+  +   +   +L       H  C DC+
Sbjct: 829  FAEGVLANL----ADEDITEC----------PICFDVMEVPTMILGCA----HQCCKDCI 870

Query: 919  AMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIEL---QPSYRQWSNTNTFL 975
                  C   G       Q P        P      P DL+E+   +P+  Q S +    
Sbjct: 871  LTHIATCEEKG-------QQPNCFACGRGPIN----PSDLVEVIRKEPTNSQPSASVALR 919

Query: 976  KQDLYRPN-----LESNKALPD-----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPM 1025
            + D+         L+  + L +     + ++FSQF   + +I+  L   G  F      M
Sbjct: 920  RNDVRSSTKLEALLKHLRRLKEEDPKFRAVVFSQFTSFLDLIQVMLQREGYDFCRFDGTM 979

Query: 1026 HSSNKIKSLDMFRHDASCLALLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRA 1083
                +  +L  F+  +    +L+    +  +GL+L+    VF+M+  W+ + E Q I R 
Sbjct: 980  DVKKRSAALSAFKSPSKQPRILIISLKAGGVGLNLTTANHVFMMDCWWNAATENQAIDRV 1039

Query: 1084 HRMGATRPIHVETLAMRGTVEEQMLEF 1110
            HR+G  + +HV    +  T+E ++L+ 
Sbjct: 1040 HRIGQDKTVHVTHFIISNTIEGRILQI 1066


>gi|358380386|gb|EHK18064.1| hypothetical protein TRIVIDRAFT_44486, partial [Trichoderma virens
            Gv29-8]
          Length = 834

 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 126/536 (23%), Positives = 229/536 (42%), Gaps = 79/536 (14%)

Query: 613  SRATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            SR+TL++VPS  L+ +W  +I++H++ G + +  +    +P +     D D+V+TT++ L
Sbjct: 308  SRSTLVIVPSALLIYNWINEIKEHLKDG-VKVIKYHSSDRPKSLDEIADSDIVVTTYSTL 366

Query: 672  SAEWGRRKKSPMMQ-VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
            +AE+  +    ++  + W R++LDE H +      T   +    + A++RW LTGTP  N
Sbjct: 367  TAEFQIKSSPSLLHCIDWYRIVLDEAHII--RRRATAFYRACDDIHANSRWCLTGTPIQN 424

Query: 731  TPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEE----GRSRLLQLLHRCMI 786
                +L+ +  +  F+  E + +    +   I  PF+   EE     + RLL L+    +
Sbjct: 425  ----KLADIGTLFAFIRAEPFTK-AATFRKYIEVPFDQSSEENPTLAKDRLLILIESLCL 479

Query: 787  SARKTDLQTIPLCIKEVTFLNFTEEHAGTYNE----LVVTVRRNILMADWNDPSHV---- 838
              R  D+  +P   + V  L+F+E  +  YN     L+  +R  +  A+ +    +    
Sbjct: 480  R-RTRDIIQLPQLRQRVRKLSFSEAESKQYNNTKEILLRMIRHRVGEAEQSSKFGIFQVN 538

Query: 839  ---------ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGL- 888
                      +   P  W  RS       ++  +    ++T AG   Q  M ++  +GL 
Sbjct: 539  LQMRLLCNHGTFQQPFSWHRRSYRDEREAIASALGQSSEITCAG--CQMPMPIIGSSGLG 596

Query: 889  DPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENP 948
            D   ++ A              H+LC +C+    E+ +    G   + Q   +  R    
Sbjct: 597  DGFYKQCA--------------HVLCSECI----EQSNTSSDG--EQTQHCPVCIR---- 632

Query: 949  NPKWPVPQDLIELQPSYRQWSN---TNTFLKQDLYRPNLES-----NKALPD-------- 992
               W  P    +        +N    N     D Y  N E      N  + D        
Sbjct: 633  ---WLRPMVDSDQMTDDDDMANCPSNNKLGDDDAYYFNDEGHSTKMNALIEDVQRDMWTT 689

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM-DGS 1051
            K IIFS +   + ++ + L  A I +  +        +   LD F  D     L+M  G+
Sbjct: 690  KSIIFSCWTRTLQLLSRYLDAAKIPYVHIDGSCPLKQRQIKLDTFAKDDETPVLIMTTGT 749

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
               GL+++   R+F++E  W+ ++E Q I+RA R+G    ++V    ++ TVEE+M
Sbjct: 750  GGFGLNITCANRIFIVELQWNPAVESQAIARAIRLGQKNKVYVTRYIIKDTVEEEM 805



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 3/84 (3%)

Query: 166 KLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVS-GDIATGTAPTMRDF 224
           KL  HQ+ A+ +ML RE      R+ L+  +  E G   Y + ++   I TG  P  R  
Sbjct: 203 KLLKHQEEALGFMLERESGHINDRYRLWETIELEGGNKEYRHRITRAKIRTGIRPNERG- 261

Query: 225 HGGMFCDEPGLGKTITALSLILKT 248
            GG+  DE G+GK+++ L+LI+KT
Sbjct: 262 -GGILADEMGMGKSLSILALIMKT 284


>gi|345560940|gb|EGX44057.1| hypothetical protein AOL_s00210g218 [Arthrobotrys oligospora ATCC
            24927]
          Length = 847

 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 226/517 (43%), Gaps = 67/517 (12%)

Query: 616  TLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TL+V+PS  ++D W ++I +  +PG +  + +    +   +     YDVV+TT++ L+A+
Sbjct: 337  TLVVLPSRQILDVWDSEIHRRFQPGAMKCYHFHGDSRVKKNDALLGYDVVLTTYHTLAAD 396

Query: 675  WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
               +K   +   +WLRV+LDE H + +    T   + A SL A  RW LTGTP  N+   
Sbjct: 397  --SQKGRVLQDSNWLRVVLDEAHWIRN--QSTQLFKAAQSLRAETRWCLTGTPIQNS--- 449

Query: 735  QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ 794
             L  L+ +LKFL    +  ++  ++  I+ P   + +     L  LL    +    + L+
Sbjct: 450  -LHDLRSLLKFLRFTPFC-DKGLFEKHIIDPLRTDSDTSLVNLQYLLRIICLRRSSSLLE 507

Query: 795  TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTI 854
              PL +K +      EE A                         ES+L   Q +F     
Sbjct: 508  LPPLEMKIIPVALCAEEQA-----------------------KYESILADCQNEFDKLVC 544

Query: 855  RNLRLSCCV--AGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKY-----NLLNGGN 907
             + +   CV  A  +K+             L  +G  PL  +++         ++     
Sbjct: 545  MDQKSKTCVLFATMMKLRR-----------LCNHGTVPLIADFSRSPAMSPGRDVPTSDG 593

Query: 908  C-LRHILCLDCVAMDSEKCSLPGCGFLYEMQ-SPEILTRPE-NP----NPKWPVPQDLIE 960
            C L  I   D  AM +E    P CG L  +   P +    E NP    N + P P   + 
Sbjct: 594  CQLCTINGSDTQAMLNELEGCPECGRLLNIDIIPNLGVVSEYNPVVSANLRPPAPDFGML 653

Query: 961  LQPSYRQWSNTNT-FLKQDLYR-------PNLESNKALPDKVIIFSQFLEHIHVIEQQLT 1012
              P+  Q+    T +L +  Y         N++ +     K + F+++   + ++ +  +
Sbjct: 654  SPPTSEQFFPAGTQYLAEPGYSSKLSAVVSNIKESSCSGSKSLAFTKWRSTLEILGEMFS 713

Query: 1013 VAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIW 1071
              GIKF  +    ++ N+   +  F+ DAS   L+M   S ++GL L+   +V ++EP W
Sbjct: 714  NVGIKFLRIDGGTNAINRSSIVKRFQEDASISVLIMTIDSCAVGLTLTNADKVHMIEPQW 773

Query: 1072 DRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            + ++EEQ I+RA+RMG  + + V       TVE+ ++
Sbjct: 774  NPAIEEQAIARAYRMGQKKTVTVIRYITEKTVEQNIV 810


>gi|388854383|emb|CCF51967.1| probable RAD16-nucleotide excision repair protein [Ustilago hordei]
          Length = 1041

 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 140/595 (23%), Positives = 252/595 (42%), Gaps = 113/595 (18%)

Query: 594  LAALRLALCEPLDSVRLYLS---RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK 650
            + A  + + + +  + L LS   +  L+V P+  +  W+ +I+ + +P +L + +W    
Sbjct: 449  MLADEMGMGKTIQMISLMLSDRKKPCLVVAPTVAIMQWRNEIEAYTQP-KLKVLIWHGAN 507

Query: 651  KPSAHSLAWDYDVVITTFNRLSA-----EWGRRKKSPMMQ-------VHWLRVMLDEGHT 698
            +          DVV+T++  L +     E G R+K+ +++       VHW R++LDE H 
Sbjct: 508  RTQNLKELKAADVVLTSYAVLESSFRKQESGFRRKNEILKEKSALHAVHWRRIILDEAHN 567

Query: 699  LGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYG------ 752
            +      TN  + A +L    RW L+GTP  N    ++  L  M++FL  + +       
Sbjct: 568  IKE--RSTNTAKGAFALQGDFRWCLSGTPLQN----RVGELYSMIRFLGGDPFAYYFCKK 621

Query: 753  ------------------------QNQKAWDGGILRPFE---AEMEEGRS---RLLQLLH 782
                                     +   W+  IL+P +   A+  EGR    RL  LL 
Sbjct: 622  CPCKSLHWAFSDKRNCDMCGHTPMHHTCYWNNEILKPIQRSGAQHGEGRDAFRRLRILLE 681

Query: 783  RCMISARKTDLQT-----IPLCIKEVTFLNFTEEHAGTYNELVV-TVRRNILMAD----W 832
            R M+  R+T L+      +P    EV    F EE    Y  L   T R+     D     
Sbjct: 682  RMML--RRTKLERADDMGLPPRTIEVRRDLFNEEEEDLYTSLYTDTTRKFSTYLDQGTVL 739

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLS 892
            N+ S++ +LL  +  +  +     LR    V   + + DA  +I     +  +   D + 
Sbjct: 740  NNYSNIFTLLT-RMRQLANHPDLVLRSKTGVVSKL-LGDAHSEIH-VCRICTDEAEDAIM 796

Query: 893  QEYAFIKYNLLNGGNCLRHILCLDCVA--MDSEKCS--LPGCGFLYEMQSPEILTRPENP 948
                           C +HI C +CV   +DSE     +P C + +   S ++      P
Sbjct: 797  -------------SRC-KHIFCRECVRQYLDSEIVPGMVPDCPYCHATLSIDLEAEALEP 842

Query: 949  NPKWPVPQDLIELQPSYRQ----------WSNTNTF--LKQDLYRPNLESNKALPDKVII 996
                  PQ  I +  S RQ          W ++     L ++L +   E +K +  K ++
Sbjct: 843  ------PQSSIRMNDSGRQGILARLDMDKWRSSTKIEALVEELTQLRSE-DKTI--KSLV 893

Query: 997  FSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLG 1055
            FSQF+  + +I  +L  AG     +   M    + +++  F  + +    L+   +  + 
Sbjct: 894  FSQFVNFLDLIAFRLQRAGFHICRLEGNMSPEARNRTIKHFMENPNVTVFLVSLKAGGVA 953

Query: 1056 LDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            L+L+  +RV+LM+P W+ S+E Q + R HR+G  RPI V+ + +  ++E +++E 
Sbjct: 954  LNLTEASRVYLMDPWWNPSVEVQAMDRIHRLGQHRPIVVKRMVIENSIESRIIEL 1008


>gi|408391325|gb|EKJ70705.1| hypothetical protein FPSE_09215 [Fusarium pseudograminearum CS3096]
          Length = 1029

 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 146/563 (25%), Positives = 250/563 (44%), Gaps = 77/563 (13%)

Query: 585  KTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVV-PSYLVDHWKTQIQQHVRPGQLHL 643
            KTLDN   + A L+ A  +   + R   SR+TL+VV  + LVD W  ++++H++ G L +
Sbjct: 484  KTLDN-GQEWANLKNAEHKGRKTTRF--SRSTLVVVSAALLVDEWMNEVKKHLQTG-LKI 539

Query: 644  FVWTDHKKP---SAHSLAWDYDVVITTFNRLSAEW--GRRKKSPMMQVHWLRVMLDEGHT 698
              +   ++P   S  ++  D D+V+TT++ L+ E+  G+ K SP+ ++ W RV+LDE H 
Sbjct: 540  VKYHGDRRPKDLSDLNMVEDSDIVVTTYHTLTTEYLIGKGKTSPLYKLGWYRVVLDEAHI 599

Query: 699  LGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQ--K 756
            +      T   Q    L A++RW L+GTP  N    +L+ +  + +F+  E + +    +
Sbjct: 600  IRRP--STKFFQACDYLHANSRWCLSGTPIQN----KLADIGSLFRFIRAEPFDKASEFR 653

Query: 757  AWDGGILRPFEAEMEE---GRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHA 813
             W   I  PF    ++    + RL+ LL   +   R  ++  +P   + V  L F +   
Sbjct: 654  KW---IETPFGNSYDDLTLVKDRLVMLLE-ALCLRRTREVLDLPKTRQFVRHLKFNKPER 709

Query: 814  GTYNELVVTVRRNILMADWNDP-SHVESLLNPKQWKFRSTTIR-NLRLSCCVAGHIK--- 868
              Y        RNI+M +       VE     K  +F    +R  LR+ C    + K   
Sbjct: 710  DQYERT-----RNIIMRNMEHRMGEVE-----KSSQFGMFQMRLQLRIVCNHGTYQKLFS 759

Query: 869  -------------VTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCL 915
                         V  AG+   E + V  E  +  L  +++   +      +   H+LC 
Sbjct: 760  WHRRNLLEEREAIVGTAGQ-YGEMLCVGCEQPMPVLGHDWSKKMFE-----DGCSHVLCT 813

Query: 916  DCVAMDSEKCSL-------PGCGFLYEMQSP---EILTRPENPNPKWPVPQDLIELQPSY 965
             C+  DS+   L       P C   Y+  SP   E          +    +D  E   + 
Sbjct: 814  KCIE-DSQFSELEISQRRCPVCVRWYQAPSPTGDEEDGTSRRKRKRNATTKDDHEHYFNA 872

Query: 966  RQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPM 1025
               S     L +D+ R +L + K+     IIFS +   +H+I + L  A I +  +    
Sbjct: 873  EGHSTKIRALVEDV-RKDLWTTKS-----IIFSCWTRTLHLIARHLEKADIPYLQLDGNS 926

Query: 1026 HSSNKIKSLDMFRHDASCLALLM-DGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAH 1084
                + ++L+ F +      L+M  G+ + GL+L+   R+F+ E  W+ S+E Q ISRA 
Sbjct: 927  PLPQRQQTLNKFENGTETPVLIMTTGTGAFGLNLTSANRIFIAELQWNPSVESQAISRAI 986

Query: 1085 RMGATRPIHVETLAMRGTVEEQM 1107
            R+G  + + V     + TVEE +
Sbjct: 987  RLGQKKEVRVTRYITKDTVEEDI 1009


>gi|401624723|gb|EJS42773.1| rad5p [Saccharomyces arboricola H-6]
          Length = 1170

 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 155/653 (23%), Positives = 270/653 (41%), Gaps = 116/653 (17%)

Query: 544  GLASPILGSYAAG----ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRL 599
             L  P+L +   G    +  G  K   A+ LI           Y   +D   FD++  ++
Sbjct: 513  SLTKPVLKTMIKGGILSDEMGLGKTIAAYSLILCCP-------YDSDVDKKLFDVSTTKV 565

Query: 600  A-------LCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP 652
            A       +    D+ + Y S+ TLI+VP  L+  W  +  +      ++  ++      
Sbjct: 566  ADNISSSFISSSEDNKKPYASKTTLIIVPMSLLTQWSNEFTKANNSPDMYHEIYYGGNVS 625

Query: 653  SAHSLAWDYD----VVITTFNRLSAEWGRRKK-----------SPMMQVHWLRVMLDEGH 697
            S  +L         VV+TT+  +  EW +  +           S +  + + R+++DEGH
Sbjct: 626  SLKTLLTKTKNPPTVVLTTYGIVQNEWAKHSQGRMNNEDANILSGLFSIDFYRIVIDEGH 685

Query: 698  TLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKA 757
             + +   +T+K  M   L    +W+LTGTP  N    +L  L  ++KFL  + + Q    
Sbjct: 686  NIRNRTTVTSKAIM--DLEGKCKWVLTGTPIIN----RLDDLYSLVKFLELDPWRQ-INY 738

Query: 758  WDGGILRPFEAEMEEGRSRLLQ------LLHRCMISARKTDLQTIPLCIKEVTF--LNFT 809
            W   +  PFE +  +    ++       LL R      K     + L  KEV    L F+
Sbjct: 739  WKTFVSTPFENKNYKQAFDVVNAILEPVLLRRTKQMKDKDGRLLVELPPKEVVIKKLPFS 798

Query: 810  EEHAGTYNELV----VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAG 865
            +     Y  L+    V+V+  I   D         LL  K++      I  LR  CC   
Sbjct: 799  KSQDVLYKYLLDKAEVSVKSGIAHGD---------LL--KKYSTILVHILRLRQVCCHPD 847

Query: 866  HIKVTDAG-EDIQET----------MDVLVENGLDPLSQEYAFIKYNL----------LN 904
             +   D   ED+ +           +D L+    + +S   +F K  L           +
Sbjct: 848  LVGTQDENDEDLSKNNKLVTDQTVELDSLIRAASEKISN--SFTKEELDAAMEKLSEKFS 905

Query: 905  GGNCLRHILCLDCVA--MDSEKCSLPGCG--------FLY-EMQSPEILTRPENPNPKWP 953
                L+ + C  C A  +D +K     CG        F Y E Q+ + L+  + PN + P
Sbjct: 906  DDKSLQSLECSICTADPIDLDKVLFTECGHSFCEKCLFEYIEFQNGKKLSL-KCPNCREP 964

Query: 954  VPQD-LIEL--------QPSYRQWSNTNTFLKQD--LYRPNLESNKALPDKVIIFSQFLE 1002
            + +  L+ L         P ++ +S+ +   K    L    L  + +  ++V+IFSQF  
Sbjct: 965  IDEGRLLTLGQQKRSSENPKFKPYSSDSKSSKITALLKELQLLQDSSAGEQVVIFSQFST 1024

Query: 1003 HIHVIEQQLT------VAGI-KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLG 1055
            ++ ++E++LT      VA I KF G  S    +N +    +  +    + LL   +  +G
Sbjct: 1025 YLDILEKELTHAFPNDVAKIYKFDGRLSLKERTNVLADFAVKDYSRQKILLLSLKAGGVG 1084

Query: 1056 LDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            L+L+  +  ++M+P W  SME+Q I R HR+G T  + V    ++ ++EE+ML
Sbjct: 1085 LNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQTSSVKVIRFIVQNSIEEKML 1137



 Score = 46.6 bits (109), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 7/73 (9%)

Query: 176 EWMLHREWNAEVLRHPLYIDLAT-EDGFYFYVNTVSGDIATGTAPTMRD-FHGGMFCDEP 233
           +W     W A+ L+     D A  ED  +FY N  SG+ +  T P ++    GG+  DE 
Sbjct: 478 KWPTDMSWAAQKLQQ----DHANLEDDIFFYANLHSGEFSL-TKPVLKTMIKGGILSDEM 532

Query: 234 GLGKTITALSLIL 246
           GLGKTI A SLIL
Sbjct: 533 GLGKTIAAYSLIL 545


>gi|317028687|ref|XP_001390499.2| hypothetical protein ANI_1_1528034 [Aspergillus niger CBS 513.88]
          Length = 906

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 137/578 (23%), Positives = 238/578 (41%), Gaps = 80/578 (13%)

Query: 585  KTLDNLAFDLAALRLALCEPLD----SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQ 640
            KTL +LA         +C  LD    +    + + TLIV P   +  W++QI++H+ P +
Sbjct: 364  KTLSSLAL--------VCNSLDRHQKTTLAGVPKGTLIVTPMSTISGWESQIKRHINPER 415

Query: 641  LHLFVWTDHKKPSAHSLAWD---YDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGH 697
            +    +  HK+   H L  +   YDVV+TT++ L+ E    +K  +    W R++LDE H
Sbjct: 416  IRWLTYHGHKR---HELTGNLDTYDVVLTTYDTLNVEG---EKGLLHNHEWQRIILDEAH 469

Query: 698  TLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKA 757
             + +S + T ++    SL A  RW LTGTP  N    +L+    +L+F+    +      
Sbjct: 470  RIRNSSSKTYRI--VCSLQAQYRWCLTGTPIQN----RLADYGALLEFIQAPPFESR--- 520

Query: 758  WDGGILRPFEAEMEEGRSRLLQLLHRCMISA--RKTDLQT-IPLCIKEVTFL----NFTE 810
              G   R     + E + R   LL   + +   R+T   +   LC+ + T L    +  +
Sbjct: 521  --GSFERMIVGSISENKRRSFDLLRNVVTATCLRRTKRNSATELCLPQKTELVERVHMDK 578

Query: 811  EHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVT 870
            E    Y       R + L A     SH  +  N          I  LRL C         
Sbjct: 579  EDREPYEFF---KRYSFLTAGKAMSSHKRTGTNIL------VLIGLLRLIC--------- 620

Query: 871  DAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDC--VAMDSEKCSLP 928
            D G  +     ++  +  D  S  +  ++   +    C + +         ++   C  P
Sbjct: 621  DHGVALLPKAALIAWHERDDTSLTWRTLESETIKCTICAQPVEEYRSGESLVEEAGCGHP 680

Query: 929  GCGFLYEMQSPEILTRPENPNPKW---------PVPQDLIE-LQPSYRQWSNTNTFLKQD 978
             CG      + E  ++P  P PK          P P      L   Y   +     L+  
Sbjct: 681  ICGIC----ATETDSQP--PCPKCEANECRSSSPTPTSFTHPLSVGYAPSAKIRALLRNI 734

Query: 979  LYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR 1038
                ++   K +  K +IFS + + + +I   LT   + F  +      S + ++L +F 
Sbjct: 735  TKSRSISDEKGVQTKFVIFSYWTKMLDLIATALTENHLTFRRIDGRSSLSQRKEALGVFG 794

Query: 1039 HDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
             D  C+ +L   G+A  G+DL+    + ++EP W+   E Q I R HR+G  R + V   
Sbjct: 795  SDPQCIIMLASIGAAGEGIDLTAANSIHIVEPQWNPMAEAQAIDRVHRIGQERDVEVVRY 854

Query: 1098 AMRGTVEEQMLEFLQ--DTDRCRRLLKEELVKPEREGA 1133
                ++E + ++++Q   +D+ R  L  + + P  +GA
Sbjct: 855  ITSESIESEAIQYVQWIQSDKLR--LINKALSPAEQGA 890


>gi|134058188|emb|CAK38380.1| unnamed protein product [Aspergillus niger]
          Length = 961

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 137/578 (23%), Positives = 238/578 (41%), Gaps = 80/578 (13%)

Query: 585  KTLDNLAFDLAALRLALCEPLD----SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQ 640
            KTL +LA         +C  LD    +    + + TLIV P   +  W++QI++H+ P +
Sbjct: 353  KTLSSLAL--------VCNSLDRHQKTTLAGVPKGTLIVTPMSTISGWESQIKRHINPER 404

Query: 641  LHLFVWTDHKKPSAHSLAWD---YDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGH 697
            +    +  HK+   H L  +   YDVV+TT++ L+ E    +K  +    W R++LDE H
Sbjct: 405  IRWLTYHGHKR---HELTGNLDTYDVVLTTYDTLNVEG---EKGLLHNHEWQRIILDEAH 458

Query: 698  TLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKA 757
             + +S + T ++    SL A  RW LTGTP  N    +L+    +L+F+    +      
Sbjct: 459  RIRNSSSKTYRI--VCSLQAQYRWCLTGTPIQN----RLADYGALLEFIQAPPFESR--- 509

Query: 758  WDGGILRPFEAEMEEGRSRLLQLLHRCMISA--RKTDLQT-IPLCIKEVTFL----NFTE 810
              G   R     + E + R   LL   + +   R+T   +   LC+ + T L    +  +
Sbjct: 510  --GSFERMIVGSISENKRRSFDLLRNVVTATCLRRTKRNSATELCLPQKTELVERVHMDK 567

Query: 811  EHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVT 870
            E    Y       R + L A     SH  +  N          I  LRL C         
Sbjct: 568  EDREPYEFF---KRYSFLTAGKAMSSHKRTGTNIL------VLIGLLRLIC--------- 609

Query: 871  DAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDC--VAMDSEKCSLP 928
            D G  +     ++  +  D  S  +  ++   +    C + +         ++   C  P
Sbjct: 610  DHGVALLPKAALIAWHERDDTSLTWRTLESETIKCTICAQPVEEYRSGESLVEEAGCGHP 669

Query: 929  GCGFLYEMQSPEILTRPENPNPKW---------PVPQDLIE-LQPSYRQWSNTNTFLKQD 978
             CG      + E  ++P  P PK          P P      L   Y   +     L+  
Sbjct: 670  ICGIC----ATETDSQP--PCPKCEANECRSSSPTPTSFTHPLSVGYAPSAKIRALLRNI 723

Query: 979  LYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR 1038
                ++   K +  K +IFS + + + +I   LT   + F  +      S + ++L +F 
Sbjct: 724  TKSRSISDEKGVQTKFVIFSYWTKMLDLIATALTENHLTFRRIDGRSSLSQRKEALGVFG 783

Query: 1039 HDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
             D  C+ +L   G+A  G+DL+    + ++EP W+   E Q I R HR+G  R + V   
Sbjct: 784  SDPQCIIMLASIGAAGEGIDLTAANSIHIVEPQWNPMAEAQAIDRVHRIGQERDVEVVRY 843

Query: 1098 AMRGTVEEQMLEFLQ--DTDRCRRLLKEELVKPEREGA 1133
                ++E + ++++Q   +D+ R  L  + + P  +GA
Sbjct: 844  ITSESIESEAIQYVQWIQSDKLR--LINKALSPAEQGA 879


>gi|300708443|ref|XP_002996400.1| hypothetical protein NCER_100499 [Nosema ceranae BRL01]
 gi|239605700|gb|EEQ82729.1| hypothetical protein NCER_100499 [Nosema ceranae BRL01]
          Length = 664

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 158/644 (24%), Positives = 284/644 (44%), Gaps = 105/644 (16%)

Query: 531  KLSPDELSEMET-TGLASPILGSYAAGETQGF--------HKIFQAFGLIRRVEK----G 577
            KL+P E  +ME  T     I G++     + F          + + FG+I ++      G
Sbjct: 28   KLTPIEEKKMERRTEENKIIFGNHKVLNEKSFISMTNIDVETLSRPFGMITKLMDYQLYG 87

Query: 578  ITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYL----SRATLIVVPSYLVDHWKTQIQ 633
            I+ W   +    +   + A ++ + + + ++ L L    +   LI+VP+  V+ W  + +
Sbjct: 88   IS-WMKSRENSFIKGGILADQMGMGKTIQTIGLLLLGMNTDINLIIVPAIAVNQWIEEFE 146

Query: 634  QHVRPGQLHLFVWTDHKKPS------AHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVH 687
            +H  PG  +  V+ +H +          +L    DV++TT+  + +++ RRK   +  + 
Sbjct: 147  KHA-PGMFN--VYKNHGREKLTVEKFERNLNSKIDVILTTYGTVESDY-RRKSGFLYSID 202

Query: 688  WLRVMLDEGHTLGSSLNLTNKLQMAIS-LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
            + R++LDE H++  S + T+    AIS L A+ RW LTGTP  N    ++  L  ++KFL
Sbjct: 203  FTRIVLDEAHSIKDSRSNTS---TAISHLKANFRWGLTGTPVQN----KVGDLFSLVKFL 255

Query: 747  HEEAYGQ--------NQKAWDGGILRPFEAEMEEGRSRLLQLLHRC-MISARKTDL--QT 795
              + Y          N   W    LR  E +    R   +     C   SA+      + 
Sbjct: 256  KLDPYSYYFCKKCSCNSMYW----LRYNEKDKFASRGFCV-----CGHFSAQHFGWWNRN 306

Query: 796  IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILM-------ADWNDPSHV----ESLLNP 844
            I   IKE   L FTEE    +++L +  +  IL        A+   PS V        N 
Sbjct: 307  IATPIKE---LGFTEEGKAIFDKLHIFTQHIILRRTKLGIEAELGLPSKVVFIERLFFNE 363

Query: 845  KQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQE---TMDVLVENGLDPLSQEYAFIKYN 901
            K+  F ++   N +     +   +    GE ++      D+L++     L+  + ++ Y 
Sbjct: 364  KELDFYTSLYSNTK-----SKFDEYNLRGEVVKNYAHIFDLLLKM---RLAANHPYLVYK 415

Query: 902  LLNGGNCLRHI-LCLDCVAMDSEKCSLP---GCGFLY--EMQSPEILTRPENPNPKWPVP 955
              N  N L  + +C  C    +E+C  P    C  ++  E     +L   E P  K  + 
Sbjct: 416  --NNQNVLSDLPICGFC----NEECDDPIISKCKHIFCREEARMFLLETSECPVCKVKIT 469

Query: 956  QDL-------IELQPSYRQWSNTNT--FLKQDLYRPNLESNKALPDKVIIFSQFLEHIHV 1006
             DL       I+ Q     W+++    FL Q L    L +NK   +K I+FSQ++  + +
Sbjct: 470  IDLNQVYEYNIKTQLDPTNWTSSTKIEFLVQKL--TELNTNKNNLEKSIVFSQYVNFLEI 527

Query: 1007 IEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVF 1065
            +  +L  AG +   +Y  M  + +  +++ F  D +    L+   A  + L+L+    VF
Sbjct: 528  LRWRLERAGFRCVVIYGNMPINQRKAAIEKFNTDHNITVFLISLKAGGVALNLTEANNVF 587

Query: 1066 LMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            LM+  W+ ++EEQ + R HR+G  RPI +  + +  ++E ++LE
Sbjct: 588  LMDLWWNPAVEEQAMDRIHRIGQHRPIKIHRVIIENSIESKILE 631


>gi|156058402|ref|XP_001595124.1| hypothetical protein SS1G_03212 [Sclerotinia sclerotiorum 1980]
 gi|154701000|gb|EDO00739.1| hypothetical protein SS1G_03212 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1142

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 131/562 (23%), Positives = 232/562 (41%), Gaps = 88/562 (15%)

Query: 616  TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--------------PSAHSLAWDY 661
            TL+V P  L+  W+++ +   + G +   V+    K               + + +   Y
Sbjct: 566  TLVVAPMSLLAQWQSEAENASKDGTMKSIVYYGSDKTANLQALCCEANAASAPNVVVTSY 625

Query: 662  DVVITTFNRLSAEWGRRK-KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
             VV++ +++++A+ G R     +  + + RV+LDE H + +  + T K    I+  A +R
Sbjct: 626  GVVLSEYSQVTAKHGDRGGHGGLFSLSFFRVILDEAHYIKNRQSKTAKACYEIA--AEHR 683

Query: 721  WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
            W LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE++       ++Q 
Sbjct: 684  WALTGTPIVN----RLEDLFSLVRFLRVEPWS-NFSFWKTFITIPFESKEFMRALDVVQT 738

Query: 781  LHRCMISARKTDLQT------IPLCIK--EVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
            +   ++  R  D++T      +PL  K  ++  +  +E     Y+ +    +R       
Sbjct: 739  VLEPLVLRRTKDMKTPSGEALVPLPKKTIDIVEIELSEAEREVYDHIFTRAKRTF----- 793

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCC-------------VAGHIKVTDAGEDIQET 879
               +++E+    K +      I  LR SCC                  +  DA   + + 
Sbjct: 794  --SANIEAGTVLKAYTSIFAQILRLRQSCCHPILTRNQTLVADEEDAAEAADAASGLSDD 851

Query: 880  MDV--------LVENGLD--------------------PLSQEYAFIKYNLLNGGNCLRH 911
            MD+        L E  +D                    P+  E   I+  +    +    
Sbjct: 852  MDLQNLIERFKLNEEAVDTNIFGAHVLEQIRDEAENECPICSEEPMIEQTVTGCWHSACK 911

Query: 912  ILCLDCVAMDSEKCSLPGCGFLYEMQSP----EILTRPENPNPKWPVPQDLIELQPSYRQ 967
               LD +   ++K   P C    E+ +     E +    +P  K   P+  I LQ   R 
Sbjct: 912  KCLLDYIKHQTDKGESPRCFSCRELLNSHDIFEAVKDEGHPESKNGKPK--ISLQ---RI 966

Query: 968  WSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHS 1027
             SN +T +   L        ++   K ++FSQF   + +IE  LT + I F  +   M  
Sbjct: 967  GSNGSTKIAALLTNLKTLRKESPSTKSVVFSQFTSFLSLIEPALTRSSIPFLRLDGSMAQ 1026

Query: 1028 SNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRM 1086
              +   L  F++    + LL+   A  +GL+L+   RVF+M+P W  ++E Q I R HRM
Sbjct: 1027 KARAAVLTQFKNSEKGVVLLLSLRAGGVGLNLTMAKRVFMMDPWWSFAVEAQAIDRVHRM 1086

Query: 1087 GATRPIHVETLAMRGTVEEQML 1108
            G    + V+   ++G+VEE+ML
Sbjct: 1087 GQVDEVLVKRFIVKGSVEERML 1108



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 18/144 (12%)

Query: 165 LKLFPHQQAAVEWMLHREWNA-----EVLRHPLYIDLA-------------TEDGFYFYV 206
           + L P+Q+ A+ WM+ +E +      E   HPL+ + A               D   FYV
Sbjct: 427 MDLRPYQKQALYWMMAKERDEKDNKREASMHPLWEEYAWPTKDMDDKEVIQVVDQDKFYV 486

Query: 207 NTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTH 266
           N  SG ++       +   GG+  DE GLGKTI  +SLI   +  +A   D  +    + 
Sbjct: 487 NPYSGALSLEFPLQEQHCLGGILADEMGLGKTIEMMSLIHSNKSAVAIQLDEKRSKATSV 546

Query: 267 NGDPRCGYYDLSGDKLTCNNMCLG 290
           N  PR      S ++  C  + + 
Sbjct: 547 NNLPRLPANSSSVERAPCTTLVVA 570


>gi|302144115|emb|CBI23220.3| unnamed protein product [Vitis vinifera]
          Length = 679

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 226/549 (41%), Gaps = 96/549 (17%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            S  TL++ P   +  W+T+I Q + PG + + V+   +K         YD V+TT++ + 
Sbjct: 166  SSPTLVICPLAALKQWETEIIQCMPPGSVKVLVYHGARKRVTGQDFSGYDFVLTTYSTVE 225

Query: 673  AE--------WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLT 724
            AE        +   +K  +  V W R++LDE H + S  N T K  +A  L +  +W LT
Sbjct: 226  AECRCHDAKPYEPERKLFLGSVRWERIILDEAHAIKSRNNSTTKAILA--LKSKYKWALT 283

Query: 725  GTPTPNTPNSQLS-HLQPM------------LKFLHEEA----YGQNQKAWDGGILRPFE 767
            GTP  N+     S  + P             L ++H  +    +G++   W+  + RP +
Sbjct: 284  GTPLQNSMEEIYSLAIYPYAYFFCWWCDCKSLDYVHSASCPCIHGRHFCWWNKYVSRPLQ 343

Query: 768  AEMEEG--RSRLL---QLLHRCMISARKTDLQT-IPLCIKEVTF----LNFTEE--HAGT 815
             E  +   R+R+L   ++L   M+   K  +   + L +K VT     L+ TEE  +   
Sbjct: 344  MENHQNSRRARILLTQKVLKSIMLRRTKKSIAVDLGLPLKTVTLRRDALDITEEDYYQTL 403

Query: 816  YNELVVTVRRNI----LMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTD 871
            Y E  +   R +    LM   N   H+  L+         T +R       +  H K  +
Sbjct: 404  YKECQLEFNRYVEDGTLM---NYYVHILELI---------TRLRQALDHPYLVVHSKSGE 451

Query: 872  AGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPG-- 929
            A  DI +     V   L   S  + F K  L +    L   LC          CSLP   
Sbjct: 452  ALCDICK----WVAKDLVVTSCGHTFCKACLEDFTKILGKSLC--------PTCSLPFTP 499

Query: 930  ---CGFLYE----MQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRP 982
               CG L+      ++  IL R    N  +P    +  L+   R             +  
Sbjct: 500  RKICGGLFAEAMGFKTSSILGRISLGN--FPTSTKIEALKEEIR-------------FMV 544

Query: 983  NLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS 1042
             ++ +     K I+FSQF   + +I   L  +GI    +   M ++ K  ++  F  D  
Sbjct: 545  EMDGSA----KGIVFSQFTSFLDLISYSLHQSGINCVQLVGKMTATAKDAAVKRFNEDPD 600

Query: 1043 CLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRG 1101
            C   L    S    L+L   + VFLMEP W+  +E+Q   R HR+G  +P+ V    +  
Sbjct: 601  CKIFLTSLKSGGAALNLPVASYVFLMEPWWNPFVEQQAYDRIHRIGQYKPVRVIKFIIEN 660

Query: 1102 TVEEQMLEF 1110
            T+EE++LE 
Sbjct: 661  TIEERILEL 669


>gi|452003705|gb|EMD96162.1| hypothetical protein COCHEDRAFT_1221777 [Cochliobolus heterostrophus
            C5]
          Length = 904

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 139/556 (25%), Positives = 236/556 (42%), Gaps = 68/556 (12%)

Query: 585  KTLDNLAFDLAALRLALCEPLDSVR--------LYLSRATLIVVPS-YLVDHWKTQIQQH 635
            KTL  LA  + +L  AL   +   R        +   + TLI+VPS  L++ W+ +I +H
Sbjct: 345  KTLTTLAVIVGSLERALNYAVGLTRGSTNSWKEIVPCKTTLIIVPSSLLLESWEDEITKH 404

Query: 636  VRPGQL--HLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVML 693
            + PG L  H F     +   AH L    D+V+TT+  ++AE+  R KS + ++ W R++L
Sbjct: 405  IEPGTLMVHRFHGLGKRVDLAHLLR--MDIVLTTYATVAAEFC-RGKSTLNRIAWYRLVL 461

Query: 694  DEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQ 753
            DE H + + L    + +   ++ A  RW LTGTP  N+    L  L  ++KFL       
Sbjct: 462  DEAHYIRNPLR--KQFRAIQTIPAHIRWCLTGTPIQNS----LEDLAALVKFLQVPVL-D 514

Query: 754  NQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHA 813
            +  ++   I  P  ++       L +LL    +   K+ L+  P  + E   L F+ E  
Sbjct: 515  DLASFRKHISTPILSKTNNRFGNLSRLLEAICLRRTKSILKQ-PEPVMETILLQFSAEEQ 573

Query: 814  GTYNELVVTVRRNILMA------DWNDPSHVESLL--------NPKQWKFRSTTIRNLRL 859
              Y +   + +  I +A         +   ++++L          +    RS+      L
Sbjct: 574  TQYEDYAASCKHYIDLAVSGHSFKKANQQVIQAILGLRLFCNDGERSLAKRSSAYGLPTL 633

Query: 860  SCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILC-LDCV 918
                   ++ +     IQ   +++V    D  S     + ++L+  G CL      LD  
Sbjct: 634  PEEALSFLQTSSDAVCIQCGCEIMVMYQGDDKSSGVLTVCHHLI-CGECLPDFEADLDEN 692

Query: 919  AMDSEKCSLPGCGFLYEMQSPEIL-----TRPENPNPKWPVPQDLIELQPSYRQWSNTNT 973
            + +   C  P CG   E  S  I+        + P   WP     I L    RQ SN   
Sbjct: 693  SENGRSCC-PFCGLRAERSSFVIIPSDTEKSTDLPTTVWPTKLRAI-LDSVQRQGSN--- 747

Query: 974  FLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKS 1033
                              DK IIFS +   + ++   L VA + +  ++  + +S + K 
Sbjct: 748  ------------------DKCIIFSAWKTTLDIMASILDVALVPYFRIHGSIPASRRSKV 789

Query: 1034 LDMFRHDASCLALLMD-GSASLGLD-LSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRP 1091
            LD F    +   LL+  G+ ++GL+ +     V ++EP W+ S+E Q I R  R+G  + 
Sbjct: 790  LDDFEQSTTVRVLLITLGTGAVGLNKMKAANIVHIIEPQWNPSVENQAIGRIIRLGQEKA 849

Query: 1092 IHVETLAMRGTVEEQM 1107
            + +    M+GTVEE +
Sbjct: 850  VKIFRYIMKGTVEEAV 865


>gi|302885430|ref|XP_003041607.1| hypothetical protein NECHADRAFT_77238 [Nectria haematococca mpVI
            77-13-4]
 gi|256722511|gb|EEU35894.1| hypothetical protein NECHADRAFT_77238 [Nectria haematococca mpVI
            77-13-4]
          Length = 948

 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 233/545 (42%), Gaps = 75/545 (13%)

Query: 615  ATLIVVPSYLVDHWKTQIQQ----HVRPGQLHLFVWTDHKKPSAHSLAWDYD---VVITT 667
            ATLIVVP  L+  W+ Q+ +    HV  G +    W  H + +  S     D   +V+TT
Sbjct: 407  ATLIVVPPPLIGTWEEQLSEWVSTHVINGGM---AWHRHHRETRLSSTDSLDHLNIVLTT 463

Query: 668  FNRLSAEWGRRKKSP---MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLL 723
            ++ +SAEW      P   +  V W R++LDE H +    N  +K+  A+ +L + +RW +
Sbjct: 464  YHTVSAEWNSGNGVPNAALFSVRWERIILDEAHLI---RNGNSKMSQAVCALDSKSRWAV 520

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTP  N    +L  L  + KF+    Y  +++ +D  I R +++   +   + L+ L  
Sbjct: 521  TGTPIQN----RLGDLATLFKFIRAHPY-TDRRCFDVDISRLWKSGEYDEAIKRLKRLSA 575

Query: 784  CMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVES--L 841
            CM+  R      +P        +NF+ E    Y+++      +I  A   D  H  +   
Sbjct: 576  CMLLRRPKGTINLPGRRDMQCPVNFSTEERVLYDKIRQKAIVSIEEALDRDSEHSRAGIY 635

Query: 842  LNPKQWKFRSTTIRNLRLSCCVAGH------------IKVTDAGEDIQETMDVLVENGLD 889
            +N  Q       I +LRL C +  H            ++ +D     Q   +V  E G  
Sbjct: 636  VNVLQ------QIESLRLICNLGLHYHTRHDKTPQASLEDSDWPSAAQRAFNVQREMGPL 689

Query: 890  PLSQ------------EYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQ 937
               Q            E   I        +CLR  LC DC     +   +  CG      
Sbjct: 690  VCVQCRSTLEIAETLFEDPTISQQSAQFSSCLR-FLCADCTQKSFQARHVVECGHDPSCS 748

Query: 938  SPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALP--DKVI 995
               + T          +   L ++Q    Q +   +          +   K LP  +K I
Sbjct: 749  MAAVSTNSSA------LESSLDDVQ----QQTKVKSIGLSSKVEALMTDIKTLPPSEKCI 798

Query: 996  IFSQF---LEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS- 1051
            +FS +   L+ + V  ++  +  ++F G   P +   +I  ++ FR D S   +L+  S 
Sbjct: 799  VFSTWRLTLDMVEVGLEKAHIPSVRFDGKV-PQNERQEI--VERFRTDPSVRVMLLTLSC 855

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             + GL L+  TR +LMEP W+ ++EEQ ++R HR+G TR +      +R + E+ ++E +
Sbjct: 856  GAAGLTLTVATRAYLMEPHWNPTLEEQALARIHRIGQTREVTTVRFYVRDSFEQHVME-V 914

Query: 1112 QDTDR 1116
            QD+ +
Sbjct: 915  QDSKK 919


>gi|358055938|dbj|GAA98283.1| hypothetical protein E5Q_04966 [Mixia osmundae IAM 14324]
          Length = 1129

 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 141/632 (22%), Positives = 262/632 (41%), Gaps = 125/632 (19%)

Query: 565  FQAFGL--IRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPS 622
            FQ  GL  +++ EKG+  W      D +        L+L   L   +    R TLIV P+
Sbjct: 515  FQLEGLYWMKQQEKGL--WSGGVLADEMGMGKTIQTLSLI--LSDYQPGSGRYTLIVAPT 570

Query: 623  YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGR----- 677
              +  W+ +I +      + + VW    +         +D+++T++  L + + R     
Sbjct: 571  VAIMQWRNEIDKFT--SNVRVCVWHGGSRTGNMQELKSHDIILTSYAVLESAFRRQHSGF 628

Query: 678  -------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
                   ++KS + Q+ W RV+LDE H +       N  + A +L A  RW L+GTP  N
Sbjct: 629  RRNGEIRKEKSLLHQIQWHRVILDEAHNIKE--RSCNTAKAAFALDAQFRWCLSGTPLQN 686

Query: 731  TPNSQLSHLQPMLKFLHEEAYG----------------QNQKA--------------WDG 760
                ++  L  +++FL  E +                 ++Q+               W+ 
Sbjct: 687  ----RVGELYSLIRFLGAEPFAHYFCKACDCRSLHWSFKDQRHCNQCGHTPMQHVCFWNN 742

Query: 761  GILRPFE-------AEMEEGRSRLLQLLHRCMISARKTDLQ---TIPLCIKEVTFLN--F 808
             IL+P +       +  ++  ++L  LL R M+  R+T L+    + L  +E+T     F
Sbjct: 743  EILKPIQKHGAQPGSPGQKAFAKLKILLDRMML--RRTKLERADDLGLPPREMTVRRDYF 800

Query: 809  TEEHAGTYNELVVTVRR--------NILMADWNDP----SHVESLLNPKQWKFRSTTIRN 856
            TEE    Y  L  +V+R        N ++ ++++     + +  + +      +S T + 
Sbjct: 801  TEEEEELYTSLYKSVQRKFSTFLDANTVLNNYSNIFTLITRMRQMADHPDLVLKSKTAKG 860

Query: 857  LRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLD 916
            L  +   +G I       DI  T  + ++   DP+                C +H+ C +
Sbjct: 861  LSSALEASGQIT------DIH-TCRICLDEAEDPII------------SAKC-KHVFCRE 900

Query: 917  C-----------VAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSY 965
            C           V  D   C LP      +++   I    E+ + K      L  + P  
Sbjct: 901  CARQYIDSAIHGVTPDCPVCHLP---LSIDLEQETI----EDVDEKQARQGMLSRIDPGK 953

Query: 966  RQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPM 1025
             + S     + ++L +   E N  L  K +IFSQF   + ++ ++L +AG K A +   M
Sbjct: 954  WRTSTKIEAIVEELSKTRNE-NHTL--KTLIFSQFTSFLDILARRLQLAGYKIARLQGSM 1010

Query: 1026 HSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAH 1084
                + ++++ F     C   L+   +  + L+L   +RV L +P W+ ++E Q   R H
Sbjct: 1011 TPEARNRTINYFTETTDCTVFLLSLKAGGVALNLVEASRVILCDPWWNPAVELQAADRVH 1070

Query: 1085 RMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            R+G  RP+ V  + +  ++E ++++ LQD  R
Sbjct: 1071 RLGQHRPVKVLRVIIENSIESRIIQ-LQDKKR 1101


>gi|190346518|gb|EDK38617.2| hypothetical protein PGUG_02715 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1155

 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 144/593 (24%), Positives = 254/593 (42%), Gaps = 112/593 (18%)

Query: 609  RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLH--LFVWTDHKKPSAHSLAWDYD---- 662
            R Y S+ TL+VVP  L+  W  +  + V   + H  L  + D    +  +   +      
Sbjct: 552  RNYASQTTLVVVPMSLLTQWHKEFLK-VNANKNHKCLIYYGDQTSVNLSTKLCNIRKEIP 610

Query: 663  -VVITTFNRLSAEW-----------GRRK--KSPMMQVHWLRVMLDEGHTLGSSLNLTNK 708
             V++TT+  L  E+           G+++  +  +  V + RV+LDEGH +    N T K
Sbjct: 611  VVILTTYGTLLNEYQSIVSRSIEVEGKQQLPREGLFSVKFFRVILDEGHNIR---NRTAK 667

Query: 709  LQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFE 767
               A+ +L +S RW+LTGTP  N    +L  +  ++KFL  E +  N   W   +  PFE
Sbjct: 668  TSKAVYALRSSRRWVLTGTPVIN----RLDDMYSLVKFLELEPWS-NFSYWKTFVTEPFE 722

Query: 768  AE-----MEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHAGTYNELV 820
                   ++  +S L  +L R   + R      + L  KEV+   + F E     Y+   
Sbjct: 723  QRKIKQTIDVVKSILDPILLRRTKNMRVDGELLVELPEKEVSIQEVTFNERERQLYDWFR 782

Query: 821  VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC---VAGHIK------VTD 871
            V   R      + +      LL  +++    T I  LR  CC   + G ++      V +
Sbjct: 783  VRASRV-----FKEGLKSGDLL--RRYTQILTQILRLRQICCHMDLVGSLQQDFDEEVAN 835

Query: 872  AGEDIQETMDVL-----------------VENGLDPLSQEYAF------------IKYNL 902
              ED++  +D                   V++ L PL Q +              I    
Sbjct: 836  GEEDLKSELDQFNQTAKPEQQDSFKTETEVKDVLYPLYQSFTLETSECSICTQSPISIGE 895

Query: 903  LNGGNCLRHILCLDCVAMD-------SEKCSLPGCGF------LYEMQSPEILTRPE--N 947
            L    C  H  CL C+          S+    P C        L+++++ +I T+ +   
Sbjct: 896  LTLTTC-GHTFCLKCILEHIAFQQRLSQPIKCPNCRASISKHKLFKLRN-KITTKKDILF 953

Query: 948  PNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVI 1007
             NP   + +D  E +  +    N ++ ++  +        ++  ++V++FSQF  ++ +I
Sbjct: 954  HNPTLTITKDQFEYEIFHYDPDNGSSKIQALILHLQQIQEQSPGERVVVFSQFSSYLDLI 1013

Query: 1008 EQQLTVAG------IKFAGMYSPMHSSNKIKSLDMFRHDASC----LALLMDGSASLGLD 1057
            E +L V G      +KF G    MH  N++  ++ F +D +     + LL   +  +GL+
Sbjct: 1014 ENELKVQGSDIFHVVKFDGRLK-MHERNQL--IESFNNDDTSPRVSILLLSLKAGGVGLN 1070

Query: 1058 LSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            L+  +R F+M+P W  S+E+Q I R HR+G  R + V    ++ ++EE+ML+ 
Sbjct: 1071 LTSASRAFMMDPWWSPSVEDQAIDRIHRIGQVRNVKVTRFIIQESIEEKMLKI 1123



 Score = 46.6 bits (109), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 27/45 (60%)

Query: 201 GFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           G YFY N  SG+++           GG+  DE GLGKTI+AL+L+
Sbjct: 489 GEYFYANLYSGELSMAKPMIKNAVRGGILADEMGLGKTISALALV 533


>gi|344234137|gb|EGV66007.1| hypothetical protein CANTEDRAFT_119056 [Candida tenuis ATCC 10573]
          Length = 1096

 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 143/588 (24%), Positives = 241/588 (40%), Gaps = 101/588 (17%)

Query: 611  YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD-----VVI 665
            Y S+ TLI+VP  L+  W+ +  +          V+     P+  S+  +       VVI
Sbjct: 531  YASQTTLIIVPMSLLAQWENEFDKANNNLNHKCIVYYGSSTPNLQSVLLNKTKHIPIVVI 590

Query: 666  TTFNRLSAEWGRRKKS------PMM---QVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SL 715
            TT+  +++E+ R +        P M    V + R++LDEGH +    N TN+   AI  L
Sbjct: 591  TTYGTVASEFARLQNRGDLFDFPGMGLYSVKFFRIILDEGHQIR---NRTNESSKAIFQL 647

Query: 716  TASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS 775
             +S +W+LTGTP  N     L  L  + KFL  E +  N   W   +  PF+ +  +   
Sbjct: 648  QSSRKWILTGTPIING----LDDLYSLAKFLELEPWS-NLSYWKMFVSLPFKQKQAKQTL 702

Query: 776  RLLQLLHRCMISARK-----------TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
             +++ +   +   R             DL    + I+EV F N   +    + +L     
Sbjct: 703  DVIKTILEPIFLRRTKSMKGDDGNPLVDLPPKEVVIEEVEFNNDENQVYSWFKDLAYKQF 762

Query: 825  RNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIK--VTDAGEDIQETMDV 882
            R+ L +  +   H+        W    T I  LR  CC    IK  +TD  E      D 
Sbjct: 763  RDKLNSGESLRKHL--------W----THILRLRQICCHQDLIKSLITDMKEQNLLPEDT 810

Query: 883  LVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVA--MDSEKCSLPGCGFLY------ 934
             VE+ +     E    KY L +  + + +  C  C    +D  + S+  CG  +      
Sbjct: 811  -VEHDIFKDHTEMMEAKYKLYDKID-INNSECSICTKTPIDMSEISITTCGHTFCLNCVI 868

Query: 935  ---EMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKA-- 989
               E Q      + +N N   P  +  I     ++     +      LY P+  S+K   
Sbjct: 869  EHLEFQ------KKKNQNRSCPNCRGPISTYKIFKVRDKKDFDFDIYLYDPSKVSSKVQA 922

Query: 990  ------------LPDKVIIFSQFLEHIHVIEQQL-------TVAGIKFAGMYSPMHSSNK 1030
                        L + VI+ SQF  ++ +IE +L        +  +KF G  S +     
Sbjct: 923  LINHIVTLKDQNLTEPVIVISQFSSYLEIIETELLLRVGEKNIRCLKFVGSLSKIQRQEI 982

Query: 1031 IKSLDMFRHDASCLALLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGA 1088
            ++  +   H  + + +L+    +  +GL+L+  +R F+M+P W  S+EEQ I R HR+G 
Sbjct: 983  LEQFNNSAHYGNQITVLLLSLKAGGVGLNLTNASRAFMMDPWWSPSIEEQAIDRLHRIGQ 1042

Query: 1089 TRPIHVETLAMRGTVEEQMLEFLQ-----------DTDRCRRLLKEEL 1125
             + + V    M+ ++E ++L+  Q           D D  RR+  EE+
Sbjct: 1043 QKTVKVIRFIMKNSIELKILKIQQRKKQLGEVVAADEDEQRRVSDEEI 1090


>gi|302889034|ref|XP_003043403.1| hypothetical protein NECHADRAFT_87480 [Nectria haematococca mpVI
            77-13-4]
 gi|256724319|gb|EEU37690.1| hypothetical protein NECHADRAFT_87480 [Nectria haematococca mpVI
            77-13-4]
          Length = 939

 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 135/584 (23%), Positives = 227/584 (38%), Gaps = 98/584 (16%)

Query: 589  NLAFDLAALRLALCEPLD------SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLH 642
             L   L+AL L +C  LD      S+   + + TLI+ P   +  W+ QI+ H+RP ++ 
Sbjct: 376  GLGKTLSALSL-ICHSLDQWEKDPSLTQGMPKTTLIITPKSTIYGWEAQIKTHIRPNKIR 434

Query: 643  LFVWTDHKKPSAHSLAWD----YDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHT 698
               W  +     H + WD    YD+V+TT++ + ++  R K SP+ +  W R++LDEG  
Sbjct: 435  ---WITYHGSRRHEV-WDDIDSYDIVLTTYDTIRSD--RAKSSPLFEKDWARIVLDEGED 488

Query: 699  L----GSSLNLTNK--------------LQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
            L    G  L  T+                Q   +L A +RW LTGTP  N     L    
Sbjct: 489  LSLSAGDILPTTDHSRKAHRIRNRGSKIFQDVCNLQAESRWCLTGTPIQN----YLDDFG 544

Query: 741  PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD---LQTIP 797
             +L F+    + + +  +D  I  P +    +G   L +++    +   K D   +  +P
Sbjct: 545  SLLSFIRVPPF-ETKDQFDSHIAEPVKQRKCQGLEMLRKVVAATCLRRTKADHAKMLNLP 603

Query: 798  LCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNL 857
              I     ++ +      Y       R + L A  +  S  ++  N          I  L
Sbjct: 604  DKIPHTECVDMSRNDRQLYQFF---KRFSYLTAGLDKTSKKKAATN------ILVLISML 654

Query: 858  RLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHI----- 912
            RL C         D GE +     +      D  +  +  ++       +C   I     
Sbjct: 655  RLIC---------DHGEALLPDSALTAWRKRDETALTWEMLESTTKRCVSCDCQIEELGA 705

Query: 913  -------------LCLDCVAM---DSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQ 956
                         LC DC A     + +   P CG    M  P      EN +   P+ +
Sbjct: 706  AESLTEALGCGHLLCGDCAAKLRGSASQLPCPKCGITASMSPPA-----EN-SSGLPMSR 759

Query: 957  DLI--ELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVA 1014
                  L+P Y   +     L+    R       + P+K +IFS + + + +I   L   
Sbjct: 760  TAFGGPLRPRYAPSAKVEALLRNISERQQRPGQNSKPNKSVIFSFWTKMLDLIGVALEDK 819

Query: 1015 GIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDR 1073
            G+KF  +      S + +++  F +D  C  +L   G+   G+DL     V ++EP W+ 
Sbjct: 820  GMKFCRIDGQASMSQRKQAIATFGNDPECNIMLASIGAVGEGIDLVCANSVHIIEPHWNP 879

Query: 1074 SMEEQVISRAHRMGATRPIHVETLAMRGTVE-------EQMLEF 1110
              E Q I R HR+G  + + V    +  ++E       EQ++ F
Sbjct: 880  MAEAQAIDRVHRIGQQQEVDVVRYIVNDSIELVMPPSHEQLMTF 923


>gi|390604440|gb|EIN13831.1| DNA repair protein RAD5 [Punctularia strigosozonata HHB-11173 SS5]
          Length = 1154

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 130/547 (23%), Positives = 240/547 (43%), Gaps = 70/547 (12%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD-----VVITTF 668
            RATL+V P+ L+  W  ++++   PG L + VW    +    ++  D +     VVIT++
Sbjct: 595  RATLVVAPTSLLGQWSDELRRSSLPGTLRVTVWHGQNRQEFGAVLDDDEQDVPLVVITSY 654

Query: 669  NRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
              L++E  +   SP+ +V WLRV+LDE H + S  + T K   A  L A  RW +TGTP 
Sbjct: 655  GTLASEHAK-PGSPVFEVDWLRVILDEAHNIKSRQSQTAKAVFA--LRARRRWAVTGTPI 711

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
             N    +L  L  +LKFL    +  +   +   I  PF A   +    +  +L   ++  
Sbjct: 712  VN----RLEDLYSLLKFLGFTPW-SSYPFFRSFITLPFLARDPKAVEIVQVILESVLLRR 766

Query: 789  RKTDLQT-----IPLCIKEVTF--LNFTEEHAGTYNELVVTVRRN--------ILMADWN 833
             K  L +     + L  KEV+   L F+      YN + ++ +RN        + M ++ 
Sbjct: 767  EKDALDSDGNRIVQLPPKEVSIEKLRFSSAERKIYNSIYLSAKRNFERLNAQGLAMKNY- 825

Query: 834  DPSHVESLLNPKQWKFRSTTIR-NLRLSCCVAGHIK---VTDAGEDIQETMD----VLVE 885
              +H+ ++L     + R   +  +L LS       +   + DA   I++  +       E
Sbjct: 826  --THILAML----MRLRRAVLHPSLVLSQENDNQTRDQDLIDADSMIRQFAENNDTTYAE 879

Query: 886  NGLDPLSQEYA------FIKYNLLNGGNCLRHILCLDCVAM---------DSEKCSLPGC 930
            + LD +  E        F++  +L   +C+ H  C DC+           +  +C +   
Sbjct: 880  SVLDDIKGETECPICLDFVEAPMLI-PSCM-HRCCKDCIVSFIDGCRAKGEEGRCPICSM 937

Query: 931  GFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKAL 990
            G + E +  E+L   +  N      +   EL    R     N F+        +++ + L
Sbjct: 938  GPIKESELLEVLIPAKTSNDLRHTGESNSEL---MRVSLRRNDFVSSTKLDALIQNLRRL 994

Query: 991  PD-----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
             D     + +IFSQF   + +IE  L   G+        M    +  ++  F+  ++   
Sbjct: 995  RDQDPCFRCVIFSQFTSFLDLIEVVLQREGLPSWRFDGSMDVKKRTAAIADFKAPSTSPK 1054

Query: 1046 LLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTV 1103
            +L+    +  +GL+L+    V++M+  W+ ++E Q I R HR+G  + ++V+   +  T+
Sbjct: 1055 ILVVSLKAGGVGLNLTMANHVYMMDCWWNAAIENQAIDRVHRIGQDKTVYVKHFIVEDTI 1114

Query: 1104 EEQMLEF 1110
            E ++L+ 
Sbjct: 1115 EGRILQI 1121


>gi|146418040|ref|XP_001484986.1| hypothetical protein PGUG_02715 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1155

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 143/592 (24%), Positives = 253/592 (42%), Gaps = 110/592 (18%)

Query: 609  RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLH--LFVWTDHKKPSAHSLAWDYD---- 662
            R Y S+ TL+VVP  L+  W  +  + V   + H  L  + D    +  +   +      
Sbjct: 552  RNYASQTTLVVVPMSLLTQWHKEFLK-VNANKNHKCLIYYGDQTSVNLSTKLCNIRKEIP 610

Query: 663  -VVITTFNRLSAEW-----------GRRK--KSPMMQVHWLRVMLDEGHTLGSSLNLTNK 708
             V++TT+  L  E+           G+++  +  +  V + RV+LDEGH + +    T+K
Sbjct: 611  VVILTTYGTLLNEYQSIVSRSIEVEGKQQLPREGLFSVKFFRVILDEGHNIRNRTAKTSK 670

Query: 709  LQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEA 768
               A+ L  S RW+LTGTP  N    +L  +  ++KFL  E +  N   W   +  PFE 
Sbjct: 671  AVYALRL--SRRWVLTGTPVIN----RLDDMYSLVKFLELEPWS-NFSYWKTFVTEPFEQ 723

Query: 769  E-----MEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHAGTYNELVV 821
                  ++  +S L  +L R   + R      + L  KEV+   + F E     Y+   V
Sbjct: 724  RKIKQTIDVVKSILDPILLRRTKNMRVDGELLVELPEKEVSIQEVTFNERERQLYDWFRV 783

Query: 822  TVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC---VAGHIK------VTDA 872
               R      + +      LL  +++    T I  LR  CC   + G ++      V + 
Sbjct: 784  RASRV-----FKEGLKSGDLL--RRYTQILTQILRLRQICCHMDLVGSLQQDFDEEVANG 836

Query: 873  GEDIQETMDVL-----------------VENGLDPLSQEYAF------------IKYNLL 903
             ED++  +D                   V++ L PL Q +              I    L
Sbjct: 837  EEDLKSELDQFNQTAKPEQQDLFKTETEVKDVLYPLYQSFTLETSECSICTQSPISIGEL 896

Query: 904  NGGNCLRHILCLDCVAMD-------SEKCSLPGCGF------LYEMQSPEILTRPE--NP 948
                C  H  CL C+          S+    P C        L+++++ +I T+ +    
Sbjct: 897  TLTTC-GHTFCLKCILEHIAFQQRLSQPIKCPNCRASISKHKLFKLRN-KITTKKDILFH 954

Query: 949  NPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIE 1008
            NP   + +D  E +  +    N ++ ++  +        ++  ++V++FSQF  ++ +IE
Sbjct: 955  NPTLTITKDQFEYEIFHYDPDNGSSKIQALILHLQQIQEQSPGERVVVFSQFSSYLDLIE 1014

Query: 1009 QQLTVAG------IKFAGMYSPMHSSNKIKSLDMFRHDASC----LALLMDGSASLGLDL 1058
             +L V G      +KF G    MH  N++  ++ F +D +     + LL   +  +GL+L
Sbjct: 1015 NELKVQGSDIFHVVKFDGRLK-MHERNQL--IESFNNDDTSPRVSILLLSLKAGGVGLNL 1071

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +  +R F+M+P W  S+E+Q I R HR+G  R + V    ++ ++EE+ML+ 
Sbjct: 1072 TSASRAFMMDPWWSPSVEDQAIDRIHRIGQVRNVKVTRFIIQESIEEKMLKI 1123



 Score = 46.6 bits (109), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 27/45 (60%)

Query: 201 GFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           G YFY N  SG+++           GG+  DE GLGKTI+AL+L+
Sbjct: 489 GEYFYANLYSGELSMAKPMIKNAVRGGILADEMGLGKTISALALV 533


>gi|302896484|ref|XP_003047122.1| hypothetical protein NECHADRAFT_122747 [Nectria haematococca mpVI
            77-13-4]
 gi|256728050|gb|EEU41409.1| hypothetical protein NECHADRAFT_122747 [Nectria haematococca mpVI
            77-13-4]
          Length = 834

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 134/540 (24%), Positives = 236/540 (43%), Gaps = 72/540 (13%)

Query: 603  EPLDSVRLYLSRATLIVV-PSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDY 661
            E  D   +  SR+TL+VV  + L+D+W ++I++H++ G L +  +  + +     +  D 
Sbjct: 293  ENKDRKSVKFSRSTLVVVSAALLIDNWISEIKKHLKAG-LRVIKYHGNSRKDQADIG-DS 350

Query: 662  DVVITTFNRLSAEW--GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
            D+V+TT++ LSAE+   + K SP+ Q+ W RV+LDE H +      T   +   SL A +
Sbjct: 351  DIVVTTYHTLSAEYQVKKGKTSPLHQIGWYRVVLDEAHIIRRP--TTTFYRACNSLEACS 408

Query: 720  RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQ--KAWDGGILRPFEAEMEEGRSRL 777
            RW LTGTP  N    +L+ +  +  F+  +++ +    + W          + E+ ++RL
Sbjct: 409  RWCLTGTPIQN----KLADIGTLFSFIKADSFKEPAVFRKWIENAYEQNAEDPEQVKNRL 464

Query: 778  LQLLHRCMISARKTDLQTIPLCIKEVTFLNFT----EEHAGTYNELVVTVRRNI------ 827
            + LL   +   R  ++  +P   + V  L+F+    E++  T N LV T++  +      
Sbjct: 465  VLLLQ-ALCLRRTREVLNLPSTSQNVRKLDFSPEEREQYTNTKNILVRTIKNRVGEIESS 523

Query: 828  -----------LMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDI 876
                       L    N  ++ ++      W  RS       L     GH ++T AG   
Sbjct: 524  SKFGLFQMRLQLRILCNHGTYQKAF----SWHRRSLQDEKEALIGSFGGHREMTCAG--C 577

Query: 877  QETMDVLVENGLDPLSQEYAFIKYNLLNGG---NCLRHILCLDCV--------AMDSEKC 925
            Q+ M +L  N  D               GG   +C  H+LC +C+         + + +C
Sbjct: 578  QQPMPILGSNWAD--------------GGGFTDHCA-HVLCSECIDESTWAGSGVPAGRC 622

Query: 926  SLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLE 985
              P C    +       T  +      PV +   E    +  ++NT    K      ++ 
Sbjct: 623  --PVCVRWSQPSRHASGTDQDVEMTDAPVKKSSAEDDHEH-YFNNTGISTKMRAIIEDVR 679

Query: 986  SNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
             +     K IIFS +   +H++ + L  A I F  +        +   LD F  +     
Sbjct: 680  VDLGTT-KSIIFSCWTRTLHLLSKHLEEAKIPFHQIDGDCPIPKRQAKLDAFDKNDDVQV 738

Query: 1046 LLM-DGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            L+M  G+ + GL+L+   R+F+ E  W+ S+E Q I+RA R+G    + V    ++ TVE
Sbjct: 739  LIMTTGTGAFGLNLTCANRIFIAELQWNPSVENQAIARAIRLGQENEVRVTRYIIKDTVE 798



 Score = 43.5 bits (101), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 7/85 (8%)

Query: 166 KLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR--D 223
           +L  HQ+ A+ +ML RE      ++ L+ ++   DG   Y+  +     T    T R  +
Sbjct: 200 ELLDHQKEALGFMLERESGHIAEKYRLWREVNHPDGTVEYIQKI-----TRKKKTQRPDE 254

Query: 224 FHGGMFCDEPGLGKTITALSLILKT 248
             GG+  DE G+GK+++ L+L+++T
Sbjct: 255 KGGGILADEMGMGKSLSILALVMRT 279


>gi|392298011|gb|EIW09110.1| Rad5p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 1168

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 270/650 (41%), Gaps = 113/650 (17%)

Query: 544  GLASPILGSYAAG----ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRL 599
             LA PIL +   G    +  G  K   A+ L+      ++  +    +D   FD+    +
Sbjct: 514  SLAKPILKTMIKGGILSDEMGLGKTVAAYSLV------LSCPHDSDVVDKKLFDIGNTAV 567

Query: 600  ALCEP---LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHS 656
            +   P    D+ + Y S+ TLIVVP  L+  W  +  +      ++  V+      S  +
Sbjct: 568  SDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKT 627

Query: 657  LAWDYD----VVITTFNRLSAEWGRRKK-----------SPMMQVHWLRVMLDEGHTLGS 701
            L         VV+TT+  +  EW +  K           S +  V++ R+++DEGH + +
Sbjct: 628  LLTKTKNPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRN 687

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
               +T+K  MA  L    +W+LTGTP  N    +L  L  ++KFL  + + Q    W   
Sbjct: 688  RTTVTSKAVMA--LQGKCKWVLTGTPIIN----RLDDLYSLVKFLELDPWRQ-INYWKTF 740

Query: 762  ILRPFEAEMEEGRSRLLQ------LLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHA 813
            +  PFE++  +    ++       LL R      K     + L  KEV    L F++   
Sbjct: 741  VSTPFESKNYKQAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQD 800

Query: 814  GTYNELV----VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKV 869
              Y  L+    V+V+  I   D         LL  K++      I  LR  CC  G I  
Sbjct: 801  LLYKFLLDKAEVSVKSGIARGD---------LL--KKYSTILVHILRLRQVCCHPGLIGS 849

Query: 870  TDAG-EDIQETMDVLVENG--LDPLSQ------EYAFIKYNL----------LNGGNCLR 910
             D   ED+ +   ++ E    LD L +      + +F K  L                 +
Sbjct: 850  QDENDEDLSKNNKLVTEQTVELDSLMRVVSERFDNSFSKEELDAMIQSLKVKYPDNKSFQ 909

Query: 911  HILCLDCVA--MDSEKCSLPGCG--------FLY-EMQSPEILTRPENPNPKWPVPQDLI 959
             + C  C    MD +K     CG        F Y E Q+ + L   + PN +  +  D  
Sbjct: 910  SLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLGL-KCPNCRNQI--DAC 966

Query: 960  ELQPSYRQWSNTNTFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIH 1005
             L    +  SN+   L+   Y P  +S+K              +  ++V+IFSQF  ++ 
Sbjct: 967  RLLALAQTNSNSKN-LEFKPYSPASKSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLD 1025

Query: 1006 VIEQQLT------VAGI-KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDL 1058
            ++E++LT      VA I KF G  S    ++ +    +  +    + LL   +  +GL+L
Sbjct: 1026 ILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNL 1085

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            +  +  ++M+P W  SME+Q I R HR+G T  + V    ++ ++EE+ML
Sbjct: 1086 TCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKML 1135



 Score = 47.4 bits (111), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 37/119 (31%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE----------------------------------WNAEV 187
             KL+L  +Q+  + WML RE                                  W A+ 
Sbjct: 431 VFKLELRNYQKQGLTWMLRREQEFAKAASDGEASETGANMINPLWKQFKWPNDMSWAAQN 490

Query: 188 LRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           ++      +  EDG +FY N  SG+ +           GG+  DE GLGKT+ A SL+L
Sbjct: 491 MQQD---HVNVEDGIFFYANLHSGEFSLAKPILKTMIKGGILSDEMGLGKTVAAYSLVL 546


>gi|323303978|gb|EGA57758.1| Rad5p [Saccharomyces cerevisiae FostersB]
          Length = 1169

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 270/650 (41%), Gaps = 113/650 (17%)

Query: 544  GLASPILGSYAAG----ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRL 599
             LA PIL +   G    +  G  K   A+ L+      ++  +    +D   FD+    +
Sbjct: 515  SLAKPILKTMIKGGILSDEMGLGKTVAAYSLV------LSCPHDSDVVDKKLFDIENTAV 568

Query: 600  ALCEP---LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHS 656
            +   P    D+ + Y S+ TLIVVP  L+  W  +  +      ++  V+      S  +
Sbjct: 569  SDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKT 628

Query: 657  LAWDYD----VVITTFNRLSAEWGRRKK-----------SPMMQVHWLRVMLDEGHTLGS 701
            L         VV+TT+  +  EW +  K           S +  V++ R+++DEGH + +
Sbjct: 629  LLTKTKNPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRN 688

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
               +T+K  MA  L    +W+LTGTP  N    +L  L  ++KFL  + + Q    W   
Sbjct: 689  RTTVTSKAVMA--LQGKCKWVLTGTPIIN----RLDDLYSLVKFLELDPWRQ-INYWKTF 741

Query: 762  ILRPFEAEMEEGRSRLLQ------LLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHA 813
            +  PFE++  +    ++       LL R      K     + L  KEV    L F++   
Sbjct: 742  VSTPFESKNYKQAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQD 801

Query: 814  GTYNELV----VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKV 869
              Y  L+    V+V+  I   D         LL  K++      I  LR  CC  G I  
Sbjct: 802  LLYKFLLDKAEVSVKSGIARGD---------LL--KKYSTILVHILRLRQVCCHPGLIGS 850

Query: 870  TDAG-EDIQETMDVLVENG--LDPLSQ------EYAFIKYNL----------LNGGNCLR 910
             D   ED+ +   ++ E    LD L +      + +F K  L                 +
Sbjct: 851  QDENDEDLSKNNKLVTEQTVELDSLMRVVSERFDNSFSKEELDAMIQSLKVKYPDNKSFQ 910

Query: 911  HILCLDCVA--MDSEKCSLPGCG--------FLY-EMQSPEILTRPENPNPKWPVPQDLI 959
             + C  C    MD +K     CG        F Y E Q+ + L   + PN +  +  D  
Sbjct: 911  SLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLGL-KCPNCRNQI--DAC 967

Query: 960  ELQPSYRQWSNTNTFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIH 1005
             L    +  SN+   L+   Y P  +S+K              +  ++V+IFSQF  ++ 
Sbjct: 968  RLLALVQTNSNSKN-LEFKPYSPASKSSKITALXKELQLLQDSSAGEQVVIFSQFSTYLD 1026

Query: 1006 VIEQQLT------VAGI-KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDL 1058
            ++E++LT      VA I KF G  S    ++ +    +  +    + LL   +  +GL+L
Sbjct: 1027 ILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNL 1086

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            +  +  ++M+P W  SME+Q I R HR+G T  + V    ++ ++EE+ML
Sbjct: 1087 TCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKML 1136



 Score = 48.5 bits (114), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 37/119 (31%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE----------------------------------WNAEV 187
             KL+L  +Q+  + WML RE                                  W A+ 
Sbjct: 432 VFKLELRNYQKQGLTWMLRREQEFAKAASDGEASETGANMINPLWKXFKWPNDMSWAAQN 491

Query: 188 LRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           L+      +  EDG +FY N  SG+ +           GG+  DE GLGKT+ A SL+L
Sbjct: 492 LQQD---HVNVEDGIFFYANLHSGEFSLAKPILKTMIKGGILSDEMGLGKTVAAYSLVL 547


>gi|259148021|emb|CAY81270.1| Rad5p [Saccharomyces cerevisiae EC1118]
          Length = 1169

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 270/650 (41%), Gaps = 113/650 (17%)

Query: 544  GLASPILGSYAAG----ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRL 599
             LA PIL +   G    +  G  K   A+ L+      ++  +    +D   FD+    +
Sbjct: 515  SLAKPILKTMIKGGILSDEMGLGKTVAAYSLV------LSCPHDSDVVDKKLFDIENTAV 568

Query: 600  ALCEP---LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHS 656
            +   P    D+ + Y S+ TLIVVP  L+  W  +  +      ++  V+      S  +
Sbjct: 569  SDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKT 628

Query: 657  LAWDYD----VVITTFNRLSAEWGRRKK-----------SPMMQVHWLRVMLDEGHTLGS 701
            L         VV+TT+  +  EW +  K           S +  V++ R+++DEGH + +
Sbjct: 629  LLTKTKNPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRN 688

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
               +T+K  MA  L    +W+LTGTP  N    +L  L  ++KFL  + + Q    W   
Sbjct: 689  RTTVTSKAVMA--LQGKCKWVLTGTPIIN----RLDDLYSLVKFLELDPWRQ-INYWKTF 741

Query: 762  ILRPFEAEMEEGRSRLLQ------LLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHA 813
            +  PFE++  +    ++       LL R      K     + L  KEV    L F++   
Sbjct: 742  VSTPFESKNYKQAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQD 801

Query: 814  GTYNELV----VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKV 869
              Y  L+    V+V+  I   D         LL  K++      I  LR  CC  G I  
Sbjct: 802  LLYKFLLDKAEVSVKSGIARGD---------LL--KKYSTILVHILRLRQVCCHPGLIGS 850

Query: 870  TDAG-EDIQETMDVLVENG--LDPLSQ------EYAFIKYNL----------LNGGNCLR 910
             D   ED+ +   ++ E    LD L +      + +F K  L                 +
Sbjct: 851  QDENDEDLSKNNKLVTEQTVELDSLMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQ 910

Query: 911  HILCLDCVA--MDSEKCSLPGCG--------FLY-EMQSPEILTRPENPNPKWPVPQDLI 959
             + C  C    MD +K     CG        F Y E Q+ + L   + PN +  +  D  
Sbjct: 911  SLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLGL-KCPNCRNQI--DAC 967

Query: 960  ELQPSYRQWSNTNTFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIH 1005
             L    +  SN+   L+   Y P  +S+K              +  ++V+IFSQF  ++ 
Sbjct: 968  RLLALVQTNSNSKN-LEFKPYSPASKSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLD 1026

Query: 1006 VIEQQLT------VAGI-KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDL 1058
            ++E++LT      VA I KF G  S    ++ +    +  +    + LL   +  +GL+L
Sbjct: 1027 ILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNL 1086

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            +  +  ++M+P W  SME+Q I R HR+G T  + V    ++ ++EE+ML
Sbjct: 1087 TCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKML 1136



 Score = 48.5 bits (114), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 37/119 (31%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE----------------------------------WNAEV 187
             KL+L  +Q+  + WML RE                                  W A+ 
Sbjct: 432 VFKLELRNYQKQGLTWMLRREQEFAKAASDGEASETGANMINPLWKQFKWPNDMSWAAQN 491

Query: 188 LRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           L+      +  EDG +FY N  SG+ +           GG+  DE GLGKT+ A SL+L
Sbjct: 492 LQQD---HVNVEDGIFFYANLHSGEFSLAKPILKTMIKGGILSDEMGLGKTVAAYSLVL 547


>gi|256269159|gb|EEU04491.1| Rad5p [Saccharomyces cerevisiae JAY291]
          Length = 1170

 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 270/650 (41%), Gaps = 113/650 (17%)

Query: 544  GLASPILGSYAAG----ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRL 599
             LA PIL +   G    +  G  K   A+ L+      ++  +    +D   FD+    +
Sbjct: 516  SLAKPILKTMIKGGILSDEMGLGKTVAAYSLV------LSCPHDSDVVDKKLFDIENTAV 569

Query: 600  ALCEP---LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHS 656
            +   P    D+ + Y S+ TLIVVP  L+  W  +  +      ++  V+      S  +
Sbjct: 570  SDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKT 629

Query: 657  LAWDYD----VVITTFNRLSAEWGRRKK-----------SPMMQVHWLRVMLDEGHTLGS 701
            L         VV+TT+  +  EW +  K           S +  V++ R+++DEGH + +
Sbjct: 630  LLTKTKNPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRN 689

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
               +T+K  MA  L    +W+LTGTP  N    +L  L  ++KFL  + + Q    W   
Sbjct: 690  RTTVTSKAVMA--LQGKCKWVLTGTPIIN----RLDDLYSLVKFLELDPWRQ-INYWKTF 742

Query: 762  ILRPFEAEMEEGRSRLLQ------LLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHA 813
            +  PFE++  +    ++       LL R      K     + L  KEV    L F++   
Sbjct: 743  VSTPFESKNYKQAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQD 802

Query: 814  GTYNELV----VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKV 869
              Y  L+    V+V+  I   D         LL  K++      I  LR  CC  G I  
Sbjct: 803  LLYKFLLDKAEVSVKSGIARGD---------LL--KKYSTILVHILRLRQVCCHPGLIGS 851

Query: 870  TDAG-EDIQETMDVLVENG--LDPLSQ------EYAFIKYNL----------LNGGNCLR 910
             D   ED+ +   ++ E    LD L +      + +F K  L                 +
Sbjct: 852  QDENDEDLSKNNKLVTEQTVELDSLMRVVSERFDNSFSKEELDAMIQSLKVKYPDNKSFQ 911

Query: 911  HILCLDCVA--MDSEKCSLPGCG--------FLY-EMQSPEILTRPENPNPKWPVPQDLI 959
             + C  C    MD +K     CG        F Y E Q+ + L   + PN +  +  D  
Sbjct: 912  SLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLGL-KCPNCRNQI--DAC 968

Query: 960  ELQPSYRQWSNTNTFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIH 1005
             L    +  SN+   L+   Y P  +S+K              +  ++V+IFSQF  ++ 
Sbjct: 969  RLLALVQTNSNSKN-LEFKPYSPASKSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLD 1027

Query: 1006 VIEQQLT------VAGI-KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDL 1058
            ++E++LT      VA I KF G  S    ++ +    +  +    + LL   +  +GL+L
Sbjct: 1028 ILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNL 1087

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            +  +  ++M+P W  SME+Q I R HR+G T  + V    ++ ++EE+ML
Sbjct: 1088 TCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKML 1137



 Score = 48.5 bits (114), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 37/119 (31%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE----------------------------------WNAEV 187
             KL+L  +Q+  + WML RE                                  W A+ 
Sbjct: 433 VFKLELRNYQKQGLTWMLRREQEFAKAASDGEASETGANMINPLWKRFKWPNDMSWAAQN 492

Query: 188 LRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           L+      +  EDG +FY N  SG+ +           GG+  DE GLGKT+ A SL+L
Sbjct: 493 LQQD---HVNVEDGIFFYANLHSGEFSLAKPILKTMIKGGILSDEMGLGKTVAAYSLVL 548


>gi|115387833|ref|XP_001211422.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114195506|gb|EAU37206.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 914

 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 229/513 (44%), Gaps = 61/513 (11%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            SRATLI+VPS  ++     ++ H R  + HL            +    +++VITT+N ++
Sbjct: 427  SRATLIIVPS--LNGSIKLVKYHGRGRKQHL------------ADIGQFEIVITTYNTIA 472

Query: 673  AEWG----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
             E+G    R   SP+  V W RV+LDE HT+ +      +  + +S  A +RW LTGTP 
Sbjct: 473  REYGIEQDRGHPSPLHGVEWYRVVLDEAHTIRNQARTFYRSVLGVS--ARSRWCLTGTPI 530

Query: 729  PNTPNSQLSHLQPMLKFLH---EEAYGQNQKAWDGGILRPFEA-EMEEGRSRLLQLLHRC 784
             NT    L  L  +L F+     +A+G    A+   I+ PFE  + ++     L LL   
Sbjct: 531  QNT----LMDLGALLAFMRIKPLDAHG----AFRHWIMGPFEDHKTKQIAIHRLSLLLEA 582

Query: 785  MISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNP 844
            +   R  +   IP   +E   ++FT E    Y E    ++R I+     +   V S +  
Sbjct: 583  ICIRRTIERVDIPRQQEETRVVHFTPEERHQYQETRKVMQRFIVQ-QAGEYRGVRSTVGM 641

Query: 845  KQWKFRSTTIRNLRLSCCVAGHIKVTDAGED--IQETMDVLVENGLDPLSQEYAFIKYNL 902
             Q   +      LR  C    + +         + E  D +     D +++     ++  
Sbjct: 642  FQMYLQ------LRSFCNHGTYQRQFSWTRRNMVHEETDAICSITRDSVARCMGCRQHLP 695

Query: 903  LNGGNCL-------RHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVP 955
            + G +         +H+ C DC  + +       C     +     ++R EN   +    
Sbjct: 696  IIGPSSTSRFVEGCKHVFCDDCSQVTNGLQKNRHCPLCSSLGG---ISRSENTGDEADGS 752

Query: 956  QDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAG 1015
             D +  QP    +S+    L  D+ + +L++ K+     IIFS +   + ++E+ L +A 
Sbjct: 753  DDSV-FQPD--GYSSKINMLVSDV-QDSLDTTKS-----IIFSCWTRTLDLVEKHLRMAD 803

Query: 1016 IKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM-DGSASLGLDLSFVTRVFLMEPIWDRS 1074
            I F  +        + + LD F   ++   L+M  G+  +GL+L  V RVF++EP W+ S
Sbjct: 804  ILFLRIDGKTPPQVRQERLDKFNTTSTVAVLIMTTGTGGVGLNLQSVNRVFIVEPQWNPS 863

Query: 1075 MEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            +E Q I+RA R+G  + + V    ++G++EE M
Sbjct: 864  VETQAIARAIRLGQEQTVSVIRYYVQGSIEEDM 896


>gi|213405915|ref|XP_002173729.1| DNA repair protein rad5 [Schizosaccharomyces japonicus yFS275]
 gi|212001776|gb|EEB07436.1| DNA repair protein rad5 [Schizosaccharomyces japonicus yFS275]
          Length = 1108

 Score =  114 bits (284), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 138/552 (25%), Positives = 229/552 (41%), Gaps = 72/552 (13%)

Query: 611  YLSRATLIVVPSYLVDHWKTQIQQ--HVRPGQLHLFVWTDHKKPSAHSLAWDYD----VV 664
            Y S+ TLIV P  LVD W  + +        +  L  +   K+    S+         +V
Sbjct: 546  YASKTTLIVAPMSLVDQWNREARNLSEEDASEKVLVYYGAEKEIDLRSVLLRKTKSPMIV 605

Query: 665  ITTFNRLSAEWGRRKKS---PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRW 721
            IT++  L +E+ R+ +     +  V W RV+LDE H + + L+ T   Q   SL +S+ W
Sbjct: 606  ITSYGVLLSEYQRKNEEISGGLFSVRWFRVILDEAHHIKNRLSKT--AQACCSLESSHNW 663

Query: 722  LLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE-----MEEGRSR 776
             +TGTP  N    +L  L  +++FL  E +  N   W   I  P+E++     ++  +S 
Sbjct: 664  AVTGTPIVN----RLEDLYSLVRFLRVEPWC-NYTYWRTFISLPYESKDVLKALDTVQSV 718

Query: 777  LLQLLHRCMISARKTD---LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWN 833
            L  L+ R     R  D   +  +P     +  L FT+     Y+ +    R  +      
Sbjct: 719  LEPLILRRTKETRNADGSPIVELPQKHVHIERLEFTDPEKEIYDAVFAKARTTV------ 772

Query: 834  DPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQ 893
            D +     L        S  +R LR +CC   H K+        E    L  + +  L++
Sbjct: 773  DENIAAGTLFKNYTTILSLLLR-LRQACC---HPKLLLHKGSEAENASSLASSQIQALAE 828

Query: 894  EYAFIKYNL------LNGGNCLRHIL--CLDCVAMDSE-----KCSLPGCGFLYEMQSPE 940
             +      +      L   + L++IL  C  C +   +     KC    C          
Sbjct: 829  TFQIENPQISSASLGLRSTDELKNILSECPICCSEPVQNPVLTKCRHAACEKCLAEHLEY 888

Query: 941  ILTRPENP----NPKWPVPQ----------DLIELQPSYRQWSNTN-------TFLKQDL 979
             + R  NP      + P+ +          D+  L+P   +W + +       T L + L
Sbjct: 889  QIKRNINPPLCHTCRQPIDKKEVYSPCSKDDISLLKPQNLKWRSVHQHQSIKLTSLLKHL 948

Query: 980  YRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH 1039
             R   E +K   +KV+IFSQF   +  I   L   GI+       M    +  +L+ FR 
Sbjct: 949  RRV-FEEHK--DEKVVIFSQFTTFLDYISTLLHSQGIEHTRFDGSMSQIARANALEHFRD 1005

Query: 1040 DASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLA 1098
              +   L++   A  +GL+L+    V+LM+P W  S+E Q + R HR+G  + +HV    
Sbjct: 1006 SKTSNVLIVSLKAGGVGLNLTCANHVYLMDPWWSWSVEAQALDRVHRLGQEKAVHVTRFI 1065

Query: 1099 MRGTVEEQMLEF 1110
            +R +VEE+ML+ 
Sbjct: 1066 IRDSVEERMLKI 1077



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 22/105 (20%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAE-----VLRHPLY-----------------IDLATED 200
            KL+L  +Q+ A+ WML +E  A+        HPL+                  D A   
Sbjct: 423 FKLQLRGYQKQALHWMLEKERKADSQDDDAAMHPLWEQFRFPSAPTDELEGIVYDSADTT 482

Query: 201 GFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             YFYVN  SG+++     +    +GG+  DE GLGKTI  L+LI
Sbjct: 483 HEYFYVNPYSGEVSIHFPRSSDKAYGGILADEMGLGKTIEMLALI 527


>gi|339245289|ref|XP_003378570.1| domain protein, SNF2 family [Trichinella spiralis]
 gi|316972508|gb|EFV56185.1| domain protein, SNF2 family [Trichinella spiralis]
          Length = 1052

 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 134/547 (24%), Positives = 240/547 (43%), Gaps = 91/547 (16%)

Query: 601  LCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD 660
            LCE  +   L  S+ TL+V  + LV  W  +I   V  G L + ++    +    +    
Sbjct: 511  LCEAEN---LIPSKTTLVVCTNSLVSQWNGEINSRVNSGLLRVKIFHGANRERVAANLAR 567

Query: 661  YDVVITTFNRLSAEWGRRKKSPMM----QVHWLRVMLDEGHTLGSSLNLTNKLQMAI--- 713
            YD+VITT+  +S+E G+ K+S  +    Q+ W R++LDEGHT+ +     +  Q AI   
Sbjct: 568  YDIVITTYGTISSELGKDKESSRVSVLGQIAWERIILDEGHTIKN-----HSTQAAIGCC 622

Query: 714  SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQ--KAWDGGILRPFEAEME 771
             L +  RW+LTGTP  N    QL  L  ++KFL  E +   +  K W        +A+ E
Sbjct: 623  KLNSIYRWVLTGTPIQN----QLKDLYSLIKFLRCEPFDDLRVWKTW-------MDAKSE 671

Query: 772  EGRSRLLQLLHRCMISARK--------TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTV 823
              + R+  L+   ++   K        + + ++P     V  L  +++   TY ++    
Sbjct: 672  SSKKRMNSLIKSMLLRRTKEQKCSVTGSAIVSLPPKTVSVVRLKLSKQEETTYMKMFTAT 731

Query: 824  RRNILMADWNDPSHVESLLN--PKQWKFRSTTIRNLRLSCCVAG-HIKVTDAGEDIQETM 880
            RR           +VE  L    ++ KF      + + +  V G H K+  +GE  ++ M
Sbjct: 732  RR-----------YVEEFLKYEEQKHKFVYPAHNSNKATGAVEGYHAKMKVSGE--KQRM 778

Query: 881  DVLVENGLDPLSQ---EYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQ 937
             ++V   L  L Q    +A  K             + +D + MD E+  L     L EM 
Sbjct: 779  QIIV--MLLRLRQACCHFALTK-----------EAVDIDALCMDREEHDL--SERLQEMS 823

Query: 938  SPEILTRPENPNPKWPVPQDLIELQPSYRQ-----WSNTNTFLKQDLYRPNLE----SNK 988
              +          ++P   D+I  Q + +      + N+    K       +E    S  
Sbjct: 824  LVD----------EFPDVSDIIGEQNTEKTGVRELFENSFVSTKVKFVMEKIEFLRKSTT 873

Query: 989  ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF-RHDASCLALL 1047
               +K +I SQ+++ + ++   L   GI F  +   + +  + + +  F R D+    +L
Sbjct: 874  TPRNKFVIVSQWVKLLDILSVHLKKRGISFTCICGGLKNEERGERMAKFNRIDSDPEVML 933

Query: 1048 MDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQ 1106
            +  +A  +GL+L+    +FLM+  W+ + E Q   R +R+G TR + +      GT+EE+
Sbjct: 934  LSLTAGGVGLNLTGGNHLFLMDLHWNPAQELQASDRINRIGQTRDVVIYKTVCSGTIEEK 993

Query: 1107 MLEFLQD 1113
            +L+  ++
Sbjct: 994  VLKLQEE 1000


>gi|393218103|gb|EJD03591.1| hypothetical protein FOMMEDRAFT_81947 [Fomitiporia mediterranea
            MF3/22]
          Length = 1036

 Score =  113 bits (283), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 134/562 (23%), Positives = 242/562 (43%), Gaps = 78/562 (13%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD----YDVVITTF 668
            SRATLI+ P+ L+D W  ++++  + G +++ VW    + +  +L        DV+IT++
Sbjct: 452  SRATLIIAPASLLDQWANELRRSSQDGTVNVLVWHGQSRENLETLIDSDVDAIDVIITSY 511

Query: 669  NRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
              LS+E  R +KS     P+  + W RV+LDE H + S  + T +   A  L A  RW+L
Sbjct: 512  GTLSSEHSRLEKSSDKSVPLFNIEWFRVVLDEAHNIKSRTSKTAR--AAFDLRAPRRWVL 569

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTP  N    +L  L  +L+FL+   +  +   +   +  PF    E     ++Q++  
Sbjct: 570  TGTPIVN----RLEDLYSLLRFLNFAPW-SDHSFFRSVVTLPF-LNHEPKALEVVQVILE 623

Query: 784  CMISARKTDLQ------TIPLCIKEVT--FLNFTEEHAGTYNELVVTVRR-----NILMA 830
             ++  R+  ++       + L  KE+   +L F       Y+ L   ++R     N    
Sbjct: 624  SVLLRREKTMRDRDGNMIVQLPDKEIKHEYLEFGPLERRIYDGLYDIIKRKFDSLNASGL 683

Query: 831  DWNDPSHVESLLNPKQWKFRSTTIR-NLRLSCCVAGHIKVTDAG-EDIQETMDVLVENGL 888
                 +H+ ++L     K R   +  +L L     G    T  G  DI E +  L   G 
Sbjct: 684  VGKKYTHILAML----MKLRRAVLHPSLVLPENEDGTSSDTGGGIVDINELIGQLANGGQ 739

Query: 889  --DPLSQEYAFIKYNLLNGG---------NCLR---------HILCLDCV-------AMD 921
              +  S  YA    N L+           +C++         H  C DC+       + +
Sbjct: 740  GSEETSGGYAQTVLNSLSMKEDEECPICMDCMQEPVLLPICAHKCCKDCILAFLQRQSEN 799

Query: 922  SEKCSLP--GCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDL 979
             E+ S P   CG + E Q  EI+ R +       +  +  E+       S+    L+++ 
Sbjct: 800  GEEGSCPVCRCGPVKEEQLLEIVRRKKARAMSIGIAPEAEEIISDEAPSSSPAFELRRND 859

Query: 980  YRPNLESN------KALPD-----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSS 1028
            ++ + + N      + L D     + IIFSQF   + +IE  L   G+ +  +       
Sbjct: 860  FKSSTKLNALIQHLRRLRDQDPCFRAIIFSQFTSFLDLIEIVLDREGLAWYRLDGSTEIK 919

Query: 1029 NKIKSLDMFRHDASCLALLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRM 1086
             + +++  F   +    + M    +  +GL+L+    VF+M+  W+ ++E Q I R HR+
Sbjct: 920  KRHQAISNFNKPSRAPKVFMLSLKAGGVGLNLTSANHVFMMDCWWNAAIENQAIDRVHRI 979

Query: 1087 GATRPIHVETLAMRGTVEEQML 1108
            G  + + V    +  T+E ++L
Sbjct: 980  GQEKTVFVTHFIVSNTIEGRIL 1001


>gi|402084969|gb|EJT79987.1| hypothetical protein GGTG_05069 [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 943

 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 136/571 (23%), Positives = 244/571 (42%), Gaps = 84/571 (14%)

Query: 612  LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            +  ATL+VVP  L+D W+ +I +H+  G+L         + S  S     +VV+TT++ +
Sbjct: 397  MDSATLVVVPPPLLDTWENEISRHIFAGRLVCRRHHAKTRLSEPSNIRGVNVVLTTYHTV 456

Query: 672  SAEW---GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTP 727
            SAEW   G  + S +    W R++LDE H +    N ++++  A+  L A +RW +TGTP
Sbjct: 457  SAEWRPTGPLQSSILFSTRWRRIILDEAHFI---RNGSSRMTRAVCDLDAVSRWAVTGTP 513

Query: 728  TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
              N    +L  L  +L+F+    Y  + K +D  I + +    E+   + L LL  C++ 
Sbjct: 514  IQN----RLIDLASLLRFIRAFPY-TDPKRFDVDISQLWRDRREDEAVKRLTLLSSCLLL 568

Query: 788  ARKTDLQTIP-----LCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
             R  +  ++P     LC   V FL    E     +E ++T          ++  H  S L
Sbjct: 569  RRPPNTISLPARRDTLC--PVEFLGPERELYKQASERLIT--------KIDEAFHQGSEL 618

Query: 843  NPKQWKFRS-TTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYN 901
            +   +       I +LRL C +          ED      +  +        ++A +   
Sbjct: 619  SRSTFYVNVLQQIESLRLICNLGTQYHTRKDPEDTDAASTMTSK-------AKWAGLAQR 671

Query: 902  LLNGGNCLRHILCLDCV-AMDSEKCSL--------------------------------- 927
              N    LR ++CL C    D+ + +                                  
Sbjct: 672  AFNVERDLRLMVCLQCADTFDTAEVAFEDPFSPHRTTALLFSCLKYLCSDCTNKLKPTDR 731

Query: 928  -PGCGFLYEMQSPEI-LTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLE 985
             PGCG      S EI ++  +  +     P DL + QPS  +  +    L  DL +  L+
Sbjct: 732  GPGCGHSPSCHSAEISISSTDREDLPETTPSDLHDFQPS--ELPSKVKALIDDLKQLPLD 789

Query: 986  SNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
            +      K ++FS +   + VIE+ L  A I        +   ++   ++ F+ + +   
Sbjct: 790  T------KSVVFSSWRMTLDVIERGLRQAKIGVVRFDGKVQQRDRKSVVEKFKANGNVRV 843

Query: 1046 LLMDGS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            +L+  S  ++GL L+  +R +LMEP W+ ++E+Q ++R HR+G  + +      +R + E
Sbjct: 844  MLLTLSCGAVGLTLTVASRAYLMEPHWNPTLEDQALARIHRIGQEKEVTTVRFYIRDSFE 903

Query: 1105 EQMLEFLQDTDRCRRLLKEELVKPEREGARS 1135
            E++++      R ++ L   L+ P   G  S
Sbjct: 904  EEIMKL----QRKKKQLAGVLLSPHDGGNTS 930



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 151 HLRCLAASIMPCMKLKLFPHQQAAVEWMLHRE--WNAEVLRHPLYIDLATEDGFYFYVNT 208
           H+    A     ++  L  HQ+ A+ +M  RE  W+       ++ +L   D    ++N 
Sbjct: 286 HINLEEAPAPSAVRASLQKHQRQALTFMCRREKGWDFAETEGDMW-ELIDSDHGRMFINR 344

Query: 209 VSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           VSG   T       DF GG+  D  GLGKT+T ++L+
Sbjct: 345 VSGSYQTQEPA---DFRGGIVADPMGLGKTLTMIALV 378


>gi|444322406|ref|XP_004181844.1| hypothetical protein TBLA_0H00320 [Tetrapisispora blattae CBS 6284]
 gi|387514890|emb|CCH62325.1| hypothetical protein TBLA_0H00320 [Tetrapisispora blattae CBS 6284]
          Length = 1301

 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 154/658 (23%), Positives = 273/658 (41%), Gaps = 110/658 (16%)

Query: 544  GLASPILGSYAAG----ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAA-LR 598
             L  P++ S   G    +  G  K      LI  V +  +       +D   F+ +  L 
Sbjct: 649  SLDKPVIKSMVRGGILSDEMGLGKTISTLALILSVPEDTS------IVDKKLFETSNDLV 702

Query: 599  LALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLA 658
            + L +P D+ R Y S+ TLIVVP  L++ W  +  +     ++   ++      S   L 
Sbjct: 703  IDLSKPEDAKRPYASKTTLIVVPMSLLNQWSEEFVKANASSEVTHELYYGGNVSSLKKLL 762

Query: 659  WDYD----VVITTFNRLSAEWGR--RKKSPMMQVH---------WLRVMLDEGHTLGSSL 703
             + +    V+ITT+  + +EW +  ++ SP  QV          + R+++DEGHT+ +  
Sbjct: 763  INNNKPPSVIITTYGVVQSEWTKIFKETSPHYQVEVSTGLYSLDFFRIVIDEGHTIRNRT 822

Query: 704  NLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGIL 763
              T+K  M +S  +  +W+LTGTP  N    +L  L  ++KFL+ E + Q    W   I 
Sbjct: 823  TATSKAIMGLS--SKRKWILTGTPIIN----RLDDLYSLVKFLNLEPWSQ-VNYWKTFIS 875

Query: 764  RPFEAE-----MEEGRSRLLQLLHRCMISARKTDLQ-TIPLCIKEVTF--LNFTEEHAGT 815
             PFE +     ++   S L  +L R     +  D +  + L  KEV    L FT +    
Sbjct: 876  NPFENKQFKQALDVVNSILDPVLLRRTKQMKDIDGKHLVELPPKEVIVEKLEFTNKQNKV 935

Query: 816  YNELV----VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTD 871
            Y + +    ++V+  +   D         LL  KQ+      I  LR  CC    +   D
Sbjct: 936  YKQFLDKAELSVKSGLARGD---------LL--KQYSTILVHILRLRQICCDESLLGTQD 984

Query: 872  AGEDIQETMDVLVENGLDPLS----------------QEYAFIKYNLLN---GGNCLRHI 912
              ++  +  + LV N  +  S                 E   +  +L       N  +++
Sbjct: 985  ENDEDLKNSNKLVNNKSEIESILKKTEDKQPNNSFTESELQLVTQSLTERFLKNNSYKNM 1044

Query: 913  LCLDCVA--MDSEKCSLPGCGFLY---------EMQSPEILTRPEN-PNPKWPVPQD-LI 959
             C  C    +D        CG  +         + QS +   R  N P  +  +  D LI
Sbjct: 1045 ECPICTTDPIDFTDSLFTECGHAFCKSCLEDYLKFQSEK--GRDHNCPTCRKEIDSDRLI 1102

Query: 960  ELQ--------PSYRQWSNTNTFLKQDLYRPNLESNK--ALPDKVIIFSQFLEHIHVIEQ 1009
             LQ        P++  + N +   K +    +L   K  +  ++V++FSQF  ++ ++E 
Sbjct: 1103 TLQCNSEITEKPNFIHYDNNHKPAKLNALLKHLHVLKDCSPGEQVVVFSQFSSYLDILEN 1162

Query: 1010 QL-------TVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVT 1062
            ++        V   KF G  S       +++      +   + LL   +  +GL+L+  +
Sbjct: 1163 EIGNSFKDEDVEIFKFDGRLSLKDRHIVLQNFGKKNLNKMKVLLLSLKAGGVGLNLTVAS 1222

Query: 1063 RVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRL 1120
              ++M+P W  S+E+Q I R HR+G T  + V    ++ ++EE++L      +R RR+
Sbjct: 1223 HAYMMDPWWSPSLEDQAIDRIHRIGQTTNVKVVRFIIKDSIEEKILRI---QERKRRI 1277


>gi|151941201|gb|EDN59579.1| hypothetical protein SCY_3612 [Saccharomyces cerevisiae YJM789]
          Length = 722

 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 164/658 (24%), Positives = 272/658 (41%), Gaps = 114/658 (17%)

Query: 544  GLASPILGSYAAG----ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRL 599
             LA PIL +   G    +  G  K   A+ L+      ++  +    +D   FD+    +
Sbjct: 68   SLAKPILKTMIKGGILSDEMGLGKTVAAYSLV------LSCPHDSDVVDKKLFDIENTAV 121

Query: 600  ALCEP---LDSVRLYLSRATLIVVPSYLVDHWKTQIQQ-HVRPGQLHLFVW---TDHKKP 652
            +   P    D+ + Y S+ TLIVVP  L+  W  +  + +  P   H   +       K 
Sbjct: 122  SDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKT 181

Query: 653  SAHSLAWDYDVVITTFNRLSAEWGRRKK-----------SPMMQVHWLRVMLDEGHTLGS 701
                      VV+TT+  +  EW +  K           S +  V++ R+++DEGH + +
Sbjct: 182  LLTKTKTPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRN 241

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
               +T+K  MA  L    +W+LTGTP  N    +L  L  ++KFL  + + Q    W   
Sbjct: 242  RTTVTSKAVMA--LQGKCKWVLTGTPIIN----RLDDLYSLVKFLELDPWRQ-INYWKTF 294

Query: 762  ILRPFEAEMEEGRSRLLQ------LLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHA 813
            +  PFE++  +    ++       LL R      K     + L  KEV    L F++   
Sbjct: 295  VSTPFESKNYKQAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQD 354

Query: 814  GTYNELV----VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKV 869
              Y  L+    V+V+  I   D         LL  K++      I  LR  CC  G I  
Sbjct: 355  LLYKFLLDKAEVSVKSGIARGD---------LL--KKYSTILVHILRLRQVCCHPGLIGS 403

Query: 870  TDAG-EDIQETMDVLVENG--LDPLSQ------EYAFIKYNL----------LNGGNCLR 910
             D   ED+ +   ++ E    LD L +      + +F K  L                 +
Sbjct: 404  QDENDEDLSKNNKLVTEQTVELDSLMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQ 463

Query: 911  HILCLDCVA--MDSEKCSLPGCG--------FLY-EMQSPEILTRPENPNPKWPVPQDLI 959
             + C  C    MD +K     CG        F Y E Q+ + L   + PN +  +  D  
Sbjct: 464  SLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLGL-KCPNCRNQI--DAC 520

Query: 960  ELQPSYRQWSNTNTFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIH 1005
             L    +  SN+   L+   Y P  +S+K              +  ++V+IFSQF  ++ 
Sbjct: 521  RLLALVQTNSNSKN-LEFKPYSPASKSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLD 579

Query: 1006 VIEQQLT------VAGI-KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDL 1058
            ++E++LT      VA I KF G  S    ++ +    +  +    + LL   +  +GL+L
Sbjct: 580  ILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNL 639

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            +  +  ++M+P W  SME+Q I R HR+G T  + V    ++ ++EE+ML  +Q+  R
Sbjct: 640  TCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKMLR-IQEKKR 696



 Score = 47.4 bits (111), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 176 EWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGL 235
           +W     W A+ L+      +  EDG +FY N  SG+ +           GG+  DE GL
Sbjct: 33  KWPNDMSWAAQNLQQD---HVNVEDGIFFYANLHSGEFSLAKPILKTMIKGGILSDEMGL 89

Query: 236 GKTITALSLIL 246
           GKT+ A SL+L
Sbjct: 90  GKTVAAYSLVL 100


>gi|429862170|gb|ELA36829.1| snf2 family helicase [Colletotrichum gloeosporioides Nara gc5]
          Length = 874

 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 150/583 (25%), Positives = 249/583 (42%), Gaps = 103/583 (17%)

Query: 590  LAFDLAALRLALCEPLDSVRLYLSRA---TLIVVPSYLVDHWKTQIQQHVRPGQL-HLFV 645
            L+  + A  + L + L  + L L+     TLIV P  ++ +W+ Q+++HV+   L  ++ 
Sbjct: 351  LSGGILADDMGLGKTLQVISLILTGGPGTTLIVAPLSVMSNWEQQMRRHVKKEHLPSIYT 410

Query: 646  WTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRR------KKSPMMQVHWLRVMLDEGHTL 699
            +    K     L   Y VVIT++N L+ E  ++      K SP+MQ+ W RV+LDEGHT+
Sbjct: 411  YHGSNKVGKDELT-KYQVVITSYNTLAMEGPKKSEDSVPKTSPLMQMKWRRVVLDEGHTI 469

Query: 700  GSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWD 759
             ++         A  LTA +RW LTGTP  N     +   Q +L+FLH     +    ++
Sbjct: 470  RNAKTKAAI--AATKLTAQSRWALTGTPIINN----IKDFQSLLQFLHITGGVEQPVIFN 523

Query: 760  GGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ----TIPLCIKEVTFLNFTEEHAGT 815
              I RP  A+  +    LLQLL R +   RK D++     +P   + V  + F  +    
Sbjct: 524  TVIARPL-AQGHQRAETLLQLLMRDLCLRRKKDMKFVDLKLPPKTEYVHRIQFRPDEKNK 582

Query: 816  YNELVVTVR------RNILMADWND-PSHVESLLNPKQ----WKFRSTTIRNLRLSCCVA 864
            Y  L+   +      RN   A      S +E LL  +Q    W      I +L     + 
Sbjct: 583  YEALLNEAKGALEDYRNQTKAGKGQFQSVLERLLRLRQVCNHWTLCRKRIDDLL--KVLE 640

Query: 865  GHIKVTDAGEDI---QETMDVLVENGLDPLSQEYAFIKYNLLNG---GNCLRHILCLDC- 917
            G   V+   E++   QE + + +E      +QE   +  + L+     +C +H+ C  C 
Sbjct: 641  GQSVVSLNPENVKILQEALRLYIE------TQEDCAVCLDTLDSPVITHC-KHVFCRGCI 693

Query: 918  --VAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFL 975
              V     KC  P C    E  S   L  P  P        D  +   S  + S T   +
Sbjct: 694  TKVIQTQHKC--PMCRNQLEEDS---LLEPA-PEGGEEAADDGFD---SDGKSSKTEALV 744

Query: 976  KQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLD 1035
            K  + +   +  K+   K++IFSQ+   +++I+ Q+  AGIKF  +   M ++ +  ++D
Sbjct: 745  K--IVQATTKDPKS---KIVIFSQWTSFLNIIQAQIAEAGIKFCRIDGSMTAAKRDAAID 799

Query: 1036 MFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
               HD +   +L    ASL +                               + RP  V 
Sbjct: 800  ALDHDPNTRVML----ASLAV------------------------------CSKRPTTVW 825

Query: 1096 TLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRT 1138
             L M GTVEE++L+   +    +R L  +  + + +G ++  T
Sbjct: 826  RLVMEGTVEERVLDIQHE----KRTLVGKAFQEKNKGKKTQET 864


>gi|299756460|ref|XP_001829349.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130]
 gi|298411686|gb|EAU92309.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130]
          Length = 1155

 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 140/564 (24%), Positives = 237/564 (42%), Gaps = 91/564 (16%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD--------VVIT 666
            ATLIV P+ L+  W  ++Q+  +PG + + VW  + +     L  D +        VVIT
Sbjct: 578  ATLIVAPTSLLAQWAEELQRSSKPGTMKIVVWHGNNRLDLDGLVDDDEGEENKPIRVVIT 637

Query: 667  TFNRLSAEWGR--RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLT 724
            ++  L++E  R  + KSP+ ++ WLRV+LDE H   S  + T K   A  L A  RW +T
Sbjct: 638  SYGVLASEHARSEKYKSPVFEIEWLRVVLDEAHACKSRTSKTAKAVYA--LQARRRWAVT 695

Query: 725  GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRC 784
            GTP  N    +L  L  +LKFL  + +  +   +   I  PF A   +    +  +L   
Sbjct: 696  GTPIIN----RLEDLFSLLKFLDFKPWS-DFAFFRSFITLPFLARDPKAIEIVQVILESI 750

Query: 785  MISARKT-----DLQTIPLCIKEVTF--LNFTEEHAGTYNELVVTVRRNILMAD-----W 832
            ++   KT       + + L  KE TF  L F+      Y+ +  T +RN    D      
Sbjct: 751  LLRREKTMRDADGKRIVELPPKEETFENLEFSPLERKIYDSIYTTAKRNFEQLDAKGLIG 810

Query: 833  NDPSHVESLLNPKQWKFRSTTIR---------NLRLSCCVAGHIKVTDAGEDIQETM--- 880
             + +H+ ++L     K R   +             LS    G + V D      +     
Sbjct: 811  KNYTHILAML----MKLRRAVLHPKLVITQDVERALSPDGDGAVDVNDLLSRFADAGSSS 866

Query: 881  ------DVLVENGLDPLSQE--------YAFIKYNLLNGGNCLRHILCLDC----VAMDS 922
                      E  L  LS+E        +  ++Y +    +C+ H  C +C    + +  
Sbjct: 867  GSASPNTAFAEQVLANLSKEEVTECPICFGEVEYPMFV-PDCM-HQFCKECITSHIGICE 924

Query: 923  EKCSLPGC-----GFLYEMQSPEILTRPEN----PNPKWPVPQDLIELQPSYRQWSNTNT 973
            EK   P C     G L      EI+   ++    PN + P P+  I L+ +  Q S    
Sbjct: 925  EKGQSPTCPSCGQGPLKSSDLVEIVRNKKDGNQPPNSQDPEPE--IVLRRNDFQSSTKLD 982

Query: 974  FLKQDLYRPNLESNKALPD-----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSS 1028
             L Q+L R        L D     + ++FSQF   + +I+  LT    +       M   
Sbjct: 983  ALVQNLRR--------LRDQDPCFRAVVFSQFTSFLDLIQVVLTRERFEHYRFDGTMDVK 1034

Query: 1029 NKIKSLDMFRHDASCLALLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRM 1086
             +  ++  F+  +    +L+    +  +GL+L+    VF+M+  W+ + E Q I R HR+
Sbjct: 1035 KRGAAISDFKAPSRKPKILVVSLKAGGVGLNLTAANHVFMMDCWWNAATENQAIDRVHRI 1094

Query: 1087 GATRPIHVETLAMRGTVEEQMLEF 1110
            G  + ++V+   +  T+E ++L+ 
Sbjct: 1095 GQEKTVYVKHFVISNTIEGRILQI 1118



 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 22/111 (19%)

Query: 165 LKLFPHQQAAVEWMLHREWNAEVLR-----HPLY---------------IDLATEDGFYF 204
           + L P+Q+ A+ WM   E  A   R     HPL+               IDL T+D   F
Sbjct: 435 MTLRPYQKQALRWMYSLETGAMDAREATSMHPLWSQYSFPHDPTGDGDIIDL-TDDDKPF 493

Query: 205 YVNTVSGDIATGTAPTMRDFHGGMFCD-EPGLGKTITALSLILKTQGTLAD 254
           Y N  SG+++     + R   GG+  D + G+GKTI   SLI  +  T  D
Sbjct: 494 YFNPYSGELSLEFPKSERRCRGGILADGKMGMGKTIMLSSLIQTSLATEDD 544


>gi|68472697|ref|XP_719667.1| hypothetical protein CaO19.9644 [Candida albicans SC5314]
 gi|68472956|ref|XP_719543.1| hypothetical protein CaO19.2097 [Candida albicans SC5314]
 gi|74680157|sp|Q5ACX1.1|RAD5_CANAL RecName: Full=DNA repair protein RAD5
 gi|46441365|gb|EAL00663.1| hypothetical protein CaO19.2097 [Candida albicans SC5314]
 gi|46441494|gb|EAL00791.1| hypothetical protein CaO19.9644 [Candida albicans SC5314]
          Length = 1084

 Score =  113 bits (282), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 150/612 (24%), Positives = 250/612 (40%), Gaps = 117/612 (19%)

Query: 590  LAFDLAALRLALCEPLD------SVRLYLSRATLIVVPSYLVDHWKTQIQQ--------- 634
            L   +A L L    P D      S R Y S+ TLIVVP  L+  WK++ ++         
Sbjct: 467  LGKTIATLALVNSVPYDNFPEPKSDRPYASQTTLIVVPMSLLFQWKSEFEKCNNNSRHVC 526

Query: 635  --HVRPGQLHLFVWT-----DHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSP---MM 684
              H    Q     W+     + K P    +   Y  V+  F RLS     + + P   + 
Sbjct: 527  RLHYGEDQETNLAWSLCNPDNSKIPIV--MITTYGTVLNEFTRLSKRRNSKGELPKVGLY 584

Query: 685  QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLK 744
             V + R++LDEGH + +    T K      L +S +W+LTGTP  N    +L  L  + K
Sbjct: 585  SVKFFRIILDEGHNIRNRNTKTAK--SVYELQSSRKWILTGTPIVN----RLDDLYSLTK 638

Query: 745  FLHEEAYGQNQKAWDGGILRPFEAE-----MEEGRSRLLQLLHRCMISARKTDLQTIPLC 799
            FL  + +  N   W   +  PFE +     ++  +S L  +  R   S +K     + L 
Sbjct: 639  FLELDPWN-NFSYWKTFVTLPFEQKKISQTLDVVKSILEPIFLRRTKSQKKNGKPLVELP 697

Query: 800  IKEVTF--LNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNL 857
             KEV    + F ++    Y        ++   A + +      LL  +++    T I  L
Sbjct: 698  AKEVVIEQIKFNDDEEKLYQWF-----KDRAYASFAEGIKSGQLL--RRYTQILTHILRL 750

Query: 858  RLSCC----VAGHIKVTDA------GEDIQETMDVLVENGL----DPLSQEYAFIKYNLL 903
            R  CC    + G  ++ D        ED+++ +  + EN +    D   +E  +  Y  +
Sbjct: 751  RQVCCHVDLIGGAHEMDDEIIEAEQDEDMRKFLTSIKENQIRFANDTDVKEKMYNLYGKI 810

Query: 904  NGGN----CLR--------------HILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRP 945
               N    C +              H  CL C+        L    F  E++  ++    
Sbjct: 811  KEENECSICTQVPIPYSEMVVTPCAHTFCLSCI--------LEHLDFQKELKKEKLCPNC 862

Query: 946  ENPNPKWPVPQDLIELQPS-------YRQWSNTNTFLKQDLYRPNLESNK---------A 989
             +P  K+ + +  I  QP+       + Q    +   +  LY PN  S+K         A
Sbjct: 863  RSPISKYQLFR--IRNQPTKGNEIRFHTQKDAPDYSFQLYLYDPNRSSSKIQALVRHLKA 920

Query: 990  L----PD-KVIIFSQFLEHIHVIEQQLTVAG-----IKFAGMYSPMHSSNKIKSLDMFRH 1039
            L    P+ KVI+FSQF  ++ +I+ +L +A       KF G  +    +  ++S +    
Sbjct: 921  LHSQSPNSKVIVFSQFSSYLDIIQSELKLASEEFIVFKFDGRLNMNDRTKLLESFNQPLE 980

Query: 1040 DASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLA 1098
            D     LL+   A  +GL+L+  +R ++M+P W  S+E+Q I R HR+G    + V    
Sbjct: 981  DGKVAILLLSLKAGGVGLNLTTASRAYMMDPWWSPSIEDQAIDRIHRIGQNETVKVVRFI 1040

Query: 1099 MRGTVEEQMLEF 1110
            M  ++E +ML+ 
Sbjct: 1041 MENSIETKMLKI 1052


>gi|238881849|gb|EEQ45487.1| DNA repair protein RAD5 [Candida albicans WO-1]
          Length = 1084

 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 150/612 (24%), Positives = 250/612 (40%), Gaps = 117/612 (19%)

Query: 590  LAFDLAALRLALCEPLD------SVRLYLSRATLIVVPSYLVDHWKTQIQQ--------- 634
            L   +A L L    P D      S R Y S+ TLIVVP  L+  WK++ ++         
Sbjct: 467  LGKTIATLALVNSVPYDNFPEPKSDRPYASQTTLIVVPMSLLFQWKSEFEKCNNNSRHVC 526

Query: 635  --HVRPGQLHLFVWT-----DHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSP---MM 684
              H    Q     W+     + K P    +   Y  V+  F RLS     + + P   + 
Sbjct: 527  RLHYGEDQETNLAWSLCNPDNSKIPIV--MITTYGTVLNEFTRLSKRRNSKGELPKVGLY 584

Query: 685  QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLK 744
             V + R++LDEGH + +    T K      L +S +W+LTGTP  N    +L  L  + K
Sbjct: 585  SVKFFRIILDEGHNIRNRNTKTAK--SVYELQSSRKWILTGTPIVN----RLDDLYSLTK 638

Query: 745  FLHEEAYGQNQKAWDGGILRPFEAE-----MEEGRSRLLQLLHRCMISARKTDLQTIPLC 799
            FL  + +  N   W   +  PFE +     ++  +S L  +  R   S +K     + L 
Sbjct: 639  FLELDPWN-NFSYWKTFVTLPFEQKKISQTLDVVKSILEPIFLRRTKSQKKNGKPLVELP 697

Query: 800  IKEVTF--LNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNL 857
             KEV    + F ++    Y        ++   A + +      LL  +++    T I  L
Sbjct: 698  AKEVVIEQIKFNDDEEKLYQWF-----KDRAYASFAEGIKSGQLL--RRYTQILTHILRL 750

Query: 858  RLSCC----VAGHIKVTDA------GEDIQETMDVLVENGL----DPLSQEYAFIKYNLL 903
            R  CC    + G  ++ D        ED+++ +  + EN +    D   +E  +  Y  +
Sbjct: 751  RQVCCHVDLIGGAHEMDDEIIEAEQDEDMRKFLTSIKENQIRFANDTDVKEKMYNLYGKI 810

Query: 904  NGGN----CLR--------------HILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRP 945
               N    C +              H  CL C+        L    F  E++  ++    
Sbjct: 811  KEENECSICTQVPIPYSEMVVTPCAHTFCLSCI--------LEHLDFQKELKKEKLCPNC 862

Query: 946  ENPNPKWPVPQDLIELQPS-------YRQWSNTNTFLKQDLYRPNLESNK---------A 989
             +P  K+ + +  I  QP+       + Q    +   +  LY PN  S+K         A
Sbjct: 863  RSPISKYQLFR--IRNQPTKGNEIRFHTQKDAPDYSFQLYLYDPNRSSSKIQALVRHLKA 920

Query: 990  L----PD-KVIIFSQFLEHIHVIEQQLTVAG-----IKFAGMYSPMHSSNKIKSLDMFRH 1039
            L    P+ KVI+FSQF  ++ +I+ +L +A       KF G  +    +  ++S +    
Sbjct: 921  LHSQSPNSKVIVFSQFSSYLDIIQSELKLASEEFIVFKFDGRLNMNDRTKLLESFNQPLE 980

Query: 1040 DASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLA 1098
            D     LL+   A  +GL+L+  +R ++M+P W  S+E+Q I R HR+G    + V    
Sbjct: 981  DGKVAILLLSLKAGGVGLNLTTASRAYMMDPWWSPSIEDQAIDRIHRIGQNETVKVVRFI 1040

Query: 1099 MRGTVEEQMLEF 1110
            M  ++E +ML+ 
Sbjct: 1041 MENSIETKMLKI 1052


>gi|170097814|ref|XP_001880126.1| SNF2 superfamily protein [Laccaria bicolor S238N-H82]
 gi|164644564|gb|EDR08813.1| SNF2 superfamily protein [Laccaria bicolor S238N-H82]
          Length = 828

 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 234/559 (41%), Gaps = 107/559 (19%)

Query: 619  VVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWG-- 676
            V P  ++ +W  QI+ H  PG L   V+ D  +  + +    +DVVITT+  ++ E    
Sbjct: 302  VAPLSVLSNWDKQIKDHCTPGTLSTCVYYDTNRSMSSAELHKFDVVITTYQIVAGEHADA 361

Query: 677  -------RRKKS---PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
                   ++KK     + +V+W R++LDEGH + +    T   +  ++L A  RW+LTGT
Sbjct: 362  TNTVAHSKKKKKLDRSLFEVNWKRIILDEGHVIRNP--KTKMARAVVALNADRRWVLTGT 419

Query: 727  PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLL-HRCM 785
            P  N+P      L  +L FL       N+  +   +LRP +     G   L  L+ H C+
Sbjct: 420  PIINSPRD----LGSLLTFLQICRPLDNEDFYKRLLLRPLKNGEAAGVELLRALMSHICI 475

Query: 786  ISARK----TDLQTIPL----CIKEVTFLNFTEEHAGTYNELV-VTVRR--NILMADWND 834
               ++      L  IPL     IK    LN  EE    Y+E+  V+ +R  N +    N 
Sbjct: 476  RRTKEMQDANGLPLIPLPPVEMIKVPVALN--EEARRLYDEVQRVSQQRFENFINRGANA 533

Query: 835  -PSHVESLLN------------PKQWKFRSTTIRNLRLSCCVAGHIKVTDAGED--IQET 879
              S+V S+L             P+ +      +RN   +     H K     E   +QE 
Sbjct: 534  VQSNVLSMLTRMRQIALHPGLVPQNY---LEELRNAEGNDGTHIHGKPLSPEEKLRLQEQ 590

Query: 880  MDVLVENGLDPLSQEYAFIKYNLLNGG---NCLRHILCLDCVA----------MDSEKCS 926
            +   +E+       E   I +++L+     NC  H+ C  C+           MD    +
Sbjct: 591  LGQAIEDC------EECPICFSVLDDARITNCA-HMFCFPCITEVISRDPKCPMDRRPLT 643

Query: 927  LPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLES 986
            L   G LYE   P  LT  + PNP               R  S+    + Q ++   L  
Sbjct: 644  L---GDLYERLPPTDLT--QKPNPV------------GIRAGSSAK--IDQLIHLLKLTP 684

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF-----RHDA 1041
                 +K ++FSQF   +  I + +   GI +      M +  + ++L  F     R   
Sbjct: 685  TN---EKSLVFSQFTSFLDKIAETMDEEGIPYVRFDGQMSAKRRQETLASFSEKGNRRPR 741

Query: 1042 SCLA--------LLMDGSASLGLDLS--FVTRVFLMEPIWDRSMEEQVISRAHRMGATRP 1091
            S LA        L+   + +LGL+L+  F   V+LM+P W   +E Q + R +R+G  + 
Sbjct: 742  SGLASKRNPRVMLISLKAGALGLNLTGKFANNVYLMDPWWQEGIESQAVDRVNRIGQKKN 801

Query: 1092 IHVETLAMRGTVEEQMLEF 1110
            +HV  L    TVE ++LE 
Sbjct: 802  VHVYQLIAEDTVESKVLEI 820


>gi|349579757|dbj|GAA24918.1| K7_Rad5p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 1170

 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 161/650 (24%), Positives = 269/650 (41%), Gaps = 113/650 (17%)

Query: 544  GLASPILGSYAAG----ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRL 599
             LA PIL +   G    +  G  K   A+ L+      ++  +    +D   FD+    +
Sbjct: 516  SLAKPILKTMIKGGILSDEMGLGKTVAAYSLV------LSCPHDSDVVDKKLFDIENTAV 569

Query: 600  ALCEP---LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHS 656
            +   P    D+ + Y S+ TLIVVP  L+  W  +  +      ++  V+      S  +
Sbjct: 570  SDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKT 629

Query: 657  LAWDYD----VVITTFNRLSAEWGRRKK-----------SPMMQVHWLRVMLDEGHTLGS 701
            L         VV+TT+  +  EW +  K           S +  V++ R+++DEGH + +
Sbjct: 630  LLTKTKNPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRN 689

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
               +T+K  MA  L    +W+LTGTP  N    +L  L  ++KFL  + + Q    W   
Sbjct: 690  RTTVTSKAVMA--LQGKCKWVLTGTPIIN----RLDDLYSLVKFLELDPWRQ-INYWKTF 742

Query: 762  ILRPFEAEMEEGRSRLLQ------LLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHA 813
            +  PFE++  +    ++       LL R      K     + L  KEV    L F++   
Sbjct: 743  VSTPFESKNYKQAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPSKEVVIKRLPFSKSQD 802

Query: 814  GTYNELV----VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKV 869
              Y  L+    V+V+  I   D         LL  K++      I  LR  CC    I  
Sbjct: 803  LLYKFLLDKAEVSVKSGIARGD---------LL--KKYSTILVHILRLRQVCCHPSLIGS 851

Query: 870  TDAG-EDIQETMDVLVE-----NGLDPLSQEY---AFIKYNL----------LNGGNCLR 910
             D   ED+ +   ++ E     + L P+  E    +F K  L                 +
Sbjct: 852  QDENDEDLSKNNKLVTEQTVELDSLMPVVSERFDNSFSKEELDAMIQSLKVKYPDNKSFQ 911

Query: 911  HILCLDCVA--MDSEKCSLPGCG--------FLY-EMQSPEILTRPENPNPKWPVPQDLI 959
             + C  C    MD +K     CG        F Y E Q+ + L   + PN +  +  D  
Sbjct: 912  SLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLGL-KCPNCRNQI--DAC 968

Query: 960  ELQPSYRQWSNTNTFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIH 1005
             L    +  SN+   L+   Y P  +S+K              +  ++V+IFSQF  ++ 
Sbjct: 969  RLLALAQTNSNSKN-LEFKPYSPASKSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLD 1027

Query: 1006 VIEQQLT------VAGI-KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDL 1058
            ++E++LT      VA I KF G  S    ++ +    +  +    + LL   +  +GL+L
Sbjct: 1028 ILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNL 1087

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            +  +  ++M+P W  SME+Q I R HR+G T  + V    ++ ++EE+ML
Sbjct: 1088 TCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKML 1137



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 37/119 (31%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE----------------------------------WNAEV 187
             KL+L  +Q+  + WML RE                                  W A+ 
Sbjct: 433 VFKLELRNYQKQGLTWMLRREQEFAKAASDGEASETGANMINPLWKQFKWPNDMSWAAQN 492

Query: 188 LRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           L+      +  EDG +FY N  SG+ +           GG+  DE GLGKT+ A SL+L
Sbjct: 493 LQQD---HVNVEDGIFFYANLHSGEFSLAKPILKTMIKGGILSDEMGLGKTVAAYSLVL 548


>gi|384500452|gb|EIE90943.1| hypothetical protein RO3G_15654 [Rhizopus delemar RA 99-880]
          Length = 942

 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 123/541 (22%), Positives = 231/541 (42%), Gaps = 72/541 (13%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            +ATLIV P  L+D W+ +I+    P +L++ V+    + S       +DV+I+++   ++
Sbjct: 386  KATLIVCPVSLIDQWRREIESKTEP-KLNVHVYHGSNRVSNPYRLAPFDVIISSYAVAAS 444

Query: 674  EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
            ++    K P+ +V   RV+LDE HT+ +   +    Q    + ++ RW +T TP  N   
Sbjct: 445  DFNETSKGPLSKVKLHRVILDEAHTIKNKATIA--AQGCCQIESTYRWCMTATPIQN--- 499

Query: 734  SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD- 792
             ++  L  ++KFL    + + ++  D  I +P  +   E   +   +L +  IS R++  
Sbjct: 500  -KVDELYSLIKFLRIRPFCEWEEFRD-AISKPMRSSNPEKGIKAAHVLMKA-ISLRRSKK 556

Query: 793  -------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPK 845
                   +  +P     +T ++F+ +    Y+   V  R       +     +      K
Sbjct: 557  AMIDGRPILNLPERNVHMTHIDFSPDERIHYD--FVNARAQAQFTKYLKAGTIM-----K 609

Query: 846  QWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNG 905
             +      +  LR +C    H  +T   ED     D    + L    Q    +   LLN 
Sbjct: 610  NYSSVLVMLLRLRQACL---HPSLT-TEEDGDAASDADQPDSLAAARQMNPEVVRRLLNE 665

Query: 906  GNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSY 965
            G  ++ I C  C+ + ++   +  CG L   +  +      + N K   PQ     Q + 
Sbjct: 666  GATIKEIECPICMDV-AQNAQIMHCGHLLCKECFDSYWNTADGNAKR-CPQ--CRAQINR 721

Query: 966  RQWSNTNTFLKQDLYRPNL-------------------------ESNKALP--------- 991
            +Q ++  +FLK  ++ P+L                         + +K L          
Sbjct: 722  QQLADVESFLK--VHAPDLMEEVEAEAETEARNRQRVAEMLSSAKIDKMLEILDETAHET 779

Query: 992  ---DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM 1048
               DK I+FSQF   + ++E+ L   G K+      M    + ++++ F  D     LL+
Sbjct: 780  DRQDKTIVFSQFTSMLSMLEKPLKNRGHKYLRYDGSMDVRQRAETVNKFFDDPQITVLLV 839

Query: 1049 DGS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
                 SLGL+L+   RV L++  W+ ++E Q I R HR+G T+ + V  + +  T+E+++
Sbjct: 840  STKCGSLGLNLTCANRVILLDVWWNPAIENQAIDRVHRIGQTKAVDVHRIFINDTIEDRI 899

Query: 1108 L 1108
            L
Sbjct: 900  L 900


>gi|293331535|ref|NP_001169906.1| uncharacterized protein LOC100383801 [Zea mays]
 gi|224032283|gb|ACN35217.1| unknown [Zea mays]
          Length = 466

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 203/486 (41%), Gaps = 70/486 (14%)

Query: 688  WLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
            W R++LDE HT+ S    T   Q A  L +  RW LTGTP  N     L  L  +L FLH
Sbjct: 3    WYRIVLDEAHTIKSPK--TKSAQAAYRLKSECRWCLTGTPLQNN----LEDLYSLLCFLH 56

Query: 748  EEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTI--PLCIKEVTF 805
             E +  N K W   I +P+E   + G   +  +L   M+   K     I  P+ +     
Sbjct: 57   VEPWC-NAKWWQRLIQKPYENGDDRGLKLVRAILRPLMLRRTKETKDKIGNPILVLPPAR 115

Query: 806  LNFTE----EHAGTYNELVVTVRRNILMAD--------WNDPSHVESLLNPKQWKFRSTT 853
            +   E    EH   + E +   RR+ +  D         N+ +++  LL           
Sbjct: 116  IEVVECEQSEHERDFYEAL--FRRSKVQFDKFVAQGSVLNNYANILELL----------- 162

Query: 854  IRNLRL-SCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQ----------EYAFIK--Y 900
               LRL  CC    + ++ A       ++ L +  L+ + Q            A+++   
Sbjct: 163  ---LRLRQCCDHPFLVISRADPKKYADLNQLAQQFLEGVQQSSSGRQNVVPSLAYVEGVV 219

Query: 901  NLLNGGNCLRHILCLDCVAMDS--EKCSLPGCG--FLYEMQSPEILTRPENPNP---KWP 953
              +  G  +   +CL+  + D     C+   CG   +   ++P+       P P   +  
Sbjct: 220  EEIRQGATMECPICLESASDDPVLTPCAHRMCGECLVSSWRTPD-----GGPCPLCRRHI 274

Query: 954  VPQDLIELQPSYRQWSNTNTFLKQDLYRPNL----ESNKALPDKVIIFSQFLEHIHVIEQ 1009
               DLI L    R   +     K       L    ES +   +K I+FSQF     ++E 
Sbjct: 275  SKSDLIILPAQSRFQVDAKNNWKDSCKVKTLVTMLESLQRKQEKSIVFSQFTSFFDLLEI 334

Query: 1010 QLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVFLME 1068
            + T  GIKF      +   +K K L  F      L L+M   A  +GL+L+  + VF+M+
Sbjct: 335  RFTQKGIKFLRFDGKLSQKHKEKVLKEFSESQDKLVLMMSLKAGGVGLNLTAASNVFMMD 394

Query: 1069 PIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKP 1128
            P W+ ++EEQ I R HR+G  R + V+   ++GTVEE+M    Q   R +R++   L   
Sbjct: 395  PWWNPAVEEQAIMRIHRIGQKREVRVKRFIVKGTVEERM---QQVQMRKQRMVSGALTDE 451

Query: 1129 EREGAR 1134
            E  GAR
Sbjct: 452  EIRGAR 457


>gi|323347520|gb|EGA81788.1| Rad5p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 1169

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 270/650 (41%), Gaps = 113/650 (17%)

Query: 544  GLASPILGSYAAG----ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRL 599
             LA PIL +   G    +  G  K   A+ L+      ++  +    +D   FD+    +
Sbjct: 515  SLAKPILKTMIKGGILSDEMGLGKTVAAYSLV------LSCPHDSDVVDKKLFDIENTAV 568

Query: 600  ALCEP---LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHS 656
            +   P    D+ + Y S+ TLIVVP  L+  W  +  +      ++  V+      S  +
Sbjct: 569  SDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKT 628

Query: 657  LAWDYD----VVITTFNRLSAEWGRRKK-----------SPMMQVHWLRVMLDEGHTLGS 701
            L         VV+TT+  +  EW +  K           S +  V++ R+++DEGH + +
Sbjct: 629  LLTKTKXPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRN 688

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
               +T+K  MA  L    +W+LTGTP  N    +L  L  ++KFL  + + Q    W   
Sbjct: 689  RTTVTSKAVMA--LQGKCKWVLTGTPIIN----RLDDLYSLVKFLELDPWRQ-INYWKTF 741

Query: 762  ILRPFEAEMEEGRSRLLQ------LLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHA 813
            +  PFE++  +    ++       LL R      K     + L  KEV    L F++   
Sbjct: 742  VSTPFESKNYKQAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQD 801

Query: 814  GTYNELV----VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKV 869
              Y  L+    V+V+  I   D         LL  K++      I  LR  CC  G I  
Sbjct: 802  LLYKFLLDKAEVSVKSGIARGD---------LL--KKYSTILVHILRLRQVCCHPGLIGS 850

Query: 870  TDAG-EDIQETMDVLVENG--LDPLSQ------EYAFIKYNL----------LNGGNCLR 910
             D   ED+ +   ++ E    LD L +      + +F K  L                 +
Sbjct: 851  QDENDEDLSKNNKLVTEQTVELDSLMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQ 910

Query: 911  HILCLDCVA--MDSEKCSLPGCG--------FLY-EMQSPEILTRPENPNPKWPVPQDLI 959
             + C  C    MD +K     CG        F Y E Q+ + L   + PN +  +  D  
Sbjct: 911  SLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLGL-KCPNCRNQI--DAC 967

Query: 960  ELQPSYRQWSNTNTFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIH 1005
             L    +  SN+   L+   Y P  +S+K              +  ++V+IFSQF  ++ 
Sbjct: 968  RLLALVQTNSNSKN-LEFKPYSPASKSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLD 1026

Query: 1006 VIEQQLT------VAGI-KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDL 1058
            ++E++LT      VA I KF G  S    ++ +    +  +    + LL   +  +GL+L
Sbjct: 1027 ILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNL 1086

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            +  +  ++M+P W  SME+Q I R HR+G T  + V    ++ ++EE+ML
Sbjct: 1087 TCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKML 1136



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 37/119 (31%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE----------------------------------WNAEV 187
             KL+L  +Q+  + WML RE                                  W A+ 
Sbjct: 432 VFKLELRNYQKQGLTWMLRREQEFAKAASDGEASETGANMINPLWKQFKWPNDMSWAAQN 491

Query: 188 LRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           L+      +  EDG +FY N  SG+ +           GG+  DE GLGKT+ A SL+L
Sbjct: 492 LQQD---HVNVEDGIFFYANLHSGEFSLAKPILKTMIKGGILSDEMGLGKTVAAYSLVL 547


>gi|6323060|ref|NP_013132.1| DNA helicase RAD5 [Saccharomyces cerevisiae S288c]
 gi|417587|sp|P32849.1|RAD5_YEAST RecName: Full=DNA repair protein RAD5; AltName: Full=Radiation
            sensitivity protein 5; AltName: Full=Revertibility
            protein 2
 gi|172347|gb|AAA34951.1| RAD5 protein [Saccharomyces cerevisiae]
 gi|1360348|emb|CAA97556.1| RAD5 [Saccharomyces cerevisiae]
 gi|285813454|tpg|DAA09350.1| TPA: DNA helicase RAD5 [Saccharomyces cerevisiae S288c]
 gi|365764318|gb|EHN05842.1| Rad5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 1169

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 268/650 (41%), Gaps = 113/650 (17%)

Query: 544  GLASPILGSYAAG----ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRL 599
             LA PIL +   G    +  G  K   A+ L+      ++  +    +D   FD+    +
Sbjct: 515  SLAKPILKTMIKGGILSDEMGLGKTVAAYSLV------LSCPHDSDVVDKKLFDIENTAV 568

Query: 600  ALCEP---LDSVRLYLSRATLIVVPSYLVDHWKTQIQQ-HVRPGQLHLFVW---TDHKKP 652
            +   P    D+ + Y S+ TLIVVP  L+  W  +  + +  P   H   +       K 
Sbjct: 569  SDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKT 628

Query: 653  SAHSLAWDYDVVITTFNRLSAEWGRRKK-----------SPMMQVHWLRVMLDEGHTLGS 701
                      VV+TT+  +  EW +  K           S +  V++ R+++DEGH + +
Sbjct: 629  LLTKTKTPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRN 688

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
               +T+K  MA  L    +W+LTGTP  N    +L  L  ++KFL  + + Q    W   
Sbjct: 689  RTTVTSKAVMA--LQGKCKWVLTGTPIIN----RLDDLYSLVKFLELDPWRQ-INYWKTF 741

Query: 762  ILRPFEAEMEEGRSRLLQ------LLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHA 813
            +  PFE++  +    ++       LL R      K     + L  KEV    L F++   
Sbjct: 742  VSTPFESKNYKQAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQD 801

Query: 814  GTYNELV----VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKV 869
              Y  L+    V+V+  I   D         LL  K++      I  LR  CC  G I  
Sbjct: 802  LLYKFLLDKAEVSVKSGIARGD---------LL--KKYSTILVHILRLRQVCCHPGLIGS 850

Query: 870  TDAG-EDIQETMDVLVENG--LDPLSQ------EYAFIKYNL----------LNGGNCLR 910
             D   ED+ +   ++ E    LD L +      + +F K  L                 +
Sbjct: 851  QDENDEDLSKNNKLVTEQTVELDSLMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQ 910

Query: 911  HILCLDCVA--MDSEKCSLPGCG--------FLY-EMQSPEILTRPENPNPKWPVPQDLI 959
             + C  C    MD +K     CG        F Y E Q+ + L   + PN +  +  D  
Sbjct: 911  SLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLGL-KCPNCRNQI--DAC 967

Query: 960  ELQPSYRQWSNTNTFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIH 1005
             L    +  SN+   L+   Y P  +S+K              +  ++V+IFSQF  ++ 
Sbjct: 968  RLLALVQTNSNSKN-LEFKPYSPASKSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLD 1026

Query: 1006 VIEQQLT------VAGI-KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDL 1058
            ++E++LT      VA I KF G  S    ++ +    +  +    + LL   +  +GL+L
Sbjct: 1027 ILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNL 1086

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            +  +  ++M+P W  SME+Q I R HR+G T  + V    ++ ++EE+ML
Sbjct: 1087 TCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKML 1136



 Score = 48.5 bits (114), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 37/119 (31%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE----------------------------------WNAEV 187
             KL+L  +Q+  + WML RE                                  W A+ 
Sbjct: 432 VFKLELRNYQKQGLTWMLRREQEFAKAASDGEASETGANMINPLWKQFKWPNDMSWAAQN 491

Query: 188 LRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           L+      +  EDG +FY N  SG+ +           GG+  DE GLGKT+ A SL+L
Sbjct: 492 LQQD---HVNVEDGIFFYANLHSGEFSLAKPILKTMIKGGILSDEMGLGKTVAAYSLVL 547


>gi|384485192|gb|EIE77372.1| hypothetical protein RO3G_02076 [Rhizopus delemar RA 99-880]
          Length = 959

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 133/583 (22%), Positives = 245/583 (42%), Gaps = 114/583 (19%)

Query: 627  HWKTQIQQHVRPGQLHLFVW--TDHKKPSAHSLA-WDY---DVVITTFNRLSAEWGR--- 677
             W+ +I    +PG + + V+   D    S   L  W+    DV+ITT+  L  EW R   
Sbjct: 365  QWRDEIMNGSKPGTIRVEVYYGDDRSVVSLDRLGDWNGSAPDVLITTYGVLMNEWTRMQL 424

Query: 678  ---RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
                K + +  + + RV+LDE H + +  + T+  Q    L A+ RW +TGTP  N    
Sbjct: 425  DSTHKTTLLYNIEFWRVILDEAHQIKNPASKTS--QACKDLQATRRWAVTGTPIQN---- 478

Query: 735  QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ 794
            +L  L  +++FL  E +  N   W   I  PFE +  +  + +  +L   ++   K    
Sbjct: 479  KLDDLFALVRFLKHEPWA-NHSFWRAFITIPFEKKDPKALTAVQTVLEPIILRRTKNMKD 537

Query: 795  T-----IPLCIK--EVTFLNFTEEHAGTYNEL--------------------------VV 821
            +     +PL  K  ++ +L+F+ E    Y+ +                          ++
Sbjct: 538  SKGQPMVPLPPKRIDIEYLSFSPEEQDIYDAIYNDSKIKFSYFCQAGHIGRNYASIFQLL 597

Query: 822  TVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGH--------------- 866
            T  R I    +    + ++  N +    ++   +N+ L   +AGH               
Sbjct: 598  TRLRQICCHPYLALQNSQTAGNAE---VKAEGGKNISLEDLIAGHHTKPSSSSSLSKQDQ 654

Query: 867  -----------IKVTDAGEDIQETMDVLV-ENGLDPLSQE--YAFIKYNLLNGGNCLRHI 912
                       + +       + T++ ++ E  + P+ +E    F  ++ +    C+ H+
Sbjct: 655  SNYRLNVLQNLLAIQQGSSATKSTVEKMIAEETMPPVPEECPICFESFDSMIAMPCM-HM 713

Query: 913  LCLDCVAMD-----------SEKCSLPG------CGFLYEMQSPEILT-RPENPNPKWPV 954
             C  CV MD            E   LPG       G + + Q  EI   R E  + +  +
Sbjct: 714  ACRLCV-MDYFQLTFFIKQKKEDQGLPGDCPICRTGPILQNQLLEIAQGRAEEEDDEKGI 772

Query: 955  PQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVA 1014
              D+ +    Y+  +  N  +K  L++ N ES+K      ++FSQF   + ++ + L   
Sbjct: 773  KIDVRKAVGGYKPSTKINALIKL-LHQYNKESHK-----TVVFSQFTSFLDIVGEALDYE 826

Query: 1015 GIKFAGMYSPMHSSNKIKSLDMFR---HDASCLALLMDGSASLGLDLSFVTRVFLMEPIW 1071
             I F  +      + + K L  F     + + + L+   +  +GL+L+  +RV +M+P W
Sbjct: 827  RIHFTRLDGSHSQAQREKVLSTFAKMDQNGANVLLISLRAGGVGLNLTCASRVVMMDPWW 886

Query: 1072 DRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDT 1114
            + ++E Q I R HR+G  + + V    +RGTVEE++LE +QD+
Sbjct: 887  NFAIESQAIDRVHRLGQLKEVKVTRFIVRGTVEERILE-IQDS 928


>gi|47211476|emb|CAG13358.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 894

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 144/578 (24%), Positives = 244/578 (42%), Gaps = 92/578 (15%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            +RATLI+ P  ++ +W  Q +QHVR    ++++++   ++          DVVITT+N L
Sbjct: 356  ARATLIISPLSVLSNWMDQFEQHVRSDVNMNVYLYYGSERNRNKKFLSSQDVVITTYNVL 415

Query: 672  SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
            SAE+G   KSP+ +++WLRV+LDEGH + +     +K    + LTA  RW+L+GTP  N+
Sbjct: 416  SAEFG--NKSPLHEINWLRVVLDEGHVIRNPNAQMSK--AVLQLTAQRRWILSGTPIQNS 471

Query: 732  PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
                +  L  +L FL  + +   +  W+  I RP       G    LQ+L +C    R  
Sbjct: 472  ----VKDLWMLLAFLRLKPF-DVKDWWNRVIQRPVTHGDPAGLQN-LQMLIKCTTLRRTK 525

Query: 792  D-------LQTIP---LCIKEVTFLNFT-EEHAGTYNELVVTVRRNILMADWNDPSHVES 840
                    L ++P   +C+++V       EE+     E   T+RR +  A+ N       
Sbjct: 526  SSKVNGRPLVSLPDKTVCVEQVELSQTEREEYELARTEGRNTIRRYV--AEGNILRSYAD 583

Query: 841  LLNPKQWKFRSTTIRNLRLSCC-------------VAGHIKV-TDAGEDIQETMDVLVEN 886
            +L           +  LR  CC             ++G      +  E + E + V++ +
Sbjct: 584  VL---------VILMKLRQLCCHPDLLLLNSFQNSLSGMSATPAEMRERLIEKLRVVLSS 634

Query: 887  GLDPLSQEYAFIKYNLLNGGNCLRHILCLDC----VAMDSEKCSLPGCGFLYEMQSPEIL 942
            G D            L     C  HI C  C    ++   EK S P C    E+++ E++
Sbjct: 635  GSDE-ECSVCLDSVRLPVITRCA-HIYCRPCITQVISTQQEKASCPLC--RGEIKTNELV 690

Query: 943  TRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLE 1002
              P        + +D      ++R  S     +  +L R   E  +    K ++ SQF  
Sbjct: 691  EVPPE-----EMQEDTSIASENWRMSSKVQALMG-NLLRLRCEDGRI---KCLVISQFTR 741

Query: 1003 HIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH------DASCLALLMDGSASLGL 1056
             + ++E  L   G  F  +     SSN+ K  ++ R       D+  + LL   +  +GL
Sbjct: 742  FLTILETPLREHGFSFVRLDG---SSNQKKRTEVIREFQNAAADSPTIMLLSLKAGGVGL 798

Query: 1057 DLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAM----RGTVEEQMLEFLQ 1112
            +L+  + VFLM+P+  R     +     R+ +   + +  L +    RG V   +     
Sbjct: 799  NLTAASHVFLMDPV--RFDCSGICLLFCRISSVLSLQLFVLGLEPLYRGAVHRPLPPSGT 856

Query: 1113 DTDRCRRLLK-------------EELVKPEREGARSHR 1137
            D + CR  +              EE  +P+ +G R HR
Sbjct: 857  DEESCRHQVHCQRFSGREDGGDPEEEARPDGKGFRLHR 894


>gi|302906966|ref|XP_003049543.1| hypothetical protein NECHADRAFT_74036 [Nectria haematococca mpVI
            77-13-4]
 gi|256730479|gb|EEU43830.1| hypothetical protein NECHADRAFT_74036 [Nectria haematococca mpVI
            77-13-4]
          Length = 1043

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 139/584 (23%), Positives = 262/584 (44%), Gaps = 91/584 (15%)

Query: 604  PLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH---KKPSAHSLAWD 660
            P+ ++R   S  +LI+VP  L+D W+ Q+ QHV+ G++    W  H   ++ S       
Sbjct: 478  PISTLR---SMPSLILVPPPLLDTWEEQLSQHVKRGEI---TWRRHYGKERLSETDHLTQ 531

Query: 661  YDVVITTFNRLSAEWG---RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLT 716
            +D++++T++ ++A+WG   R   S +    W R++LDE H +    N  +++  A+ +L 
Sbjct: 532  WDIILSTYHTVTADWGGGQRAGSSTVFSTMWKRIILDEAHVIR---NTQSQMSKAVCALD 588

Query: 717  ASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFE-AEMEEGRS 775
            A+ RW +TGTP  N    ++  L  +LKF+    Y +  K ++  I + ++  +++E   
Sbjct: 589  AAARWAVTGTPVQN----RIGDLAALLKFIRAHPYDE-AKRFESDIGQMWKTGDIQEAAR 643

Query: 776  RLLQLLHRCMISARKTDLQTIPLCIKEVTF-LNFTEEHAGTYNEL--VVTVRRNILMADW 832
            RL  L    ++   KT +   P   K++ F ++F+ +    Y++L      R     +D 
Sbjct: 644  RLKDLSSGLILRRPKTVIDLPPR--KDLKFRVDFSPDERKFYDKLRHQAITRMEEAFSDG 701

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDI--QETMDVLVENGLDP 890
            +  S  +S +   Q       I  LR+ C +  H    DA  D+  +E      ++    
Sbjct: 702  DGGSASDSYITVIQ------KINALRMVCNLGLHY---DARHDLAAKEESANHSKDWSTN 752

Query: 891  LSQEYAFIK-YNLLNGGNCLRHILC-LDCVAMDSEKCSLP---GC-GFLYE--MQSPEIL 942
            + Q + F +  + +   NC  H  C +    +D+E    P    C  FL    +Q  + L
Sbjct: 753  VQQTFDFQREMDSVQCSNC--HASCDMMATTLDTESLVQPYFASCLSFLCSDCVQRWKRL 810

Query: 943  TRP-----ENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNK--------- 988
             +P      + +P  PV  +   L+ S R   N+          P   S+K         
Sbjct: 811  NKPITCPHGSSHPIAPVNLNWTALEESLRSSGNSGVTSTT----PTQLSSKVTALVSQLG 866

Query: 989  ALPD--KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
            +LP   K ++F+ +   + ++   L  A I++      +    +   ++ F+ D S    
Sbjct: 867  SLPAGVKSVVFTSWRMTLDLVAIGLDQARIRYVRFDGNVPQKQRSSVIETFKKDPSVTVF 926

Query: 1047 LMDGS-ASLG------------------LDLSFVTRVFLMEPIWDRSMEEQVISRAHRMG 1087
            L+  S  ++G                  L L+  +R FL+EP W+ ++EEQ ++R HR+G
Sbjct: 927  LLTLSCGAVGWAFVPCIKRHPTNVCPHRLTLTEASRAFLIEPHWNPTLEEQALARVHRLG 986

Query: 1088 ATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPERE 1131
              R +      ++ T EE++L    D  + ++ L+E L+ P+ E
Sbjct: 987  QQREVTTVRFFVKDTFEERVL----DVQKSKKKLEEVLLVPKGE 1026



 Score = 47.0 bits (110), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 158 SIMPCMKLKLFPHQQAAVEWMLHRE--WNAEVLRHPLYIDLATEDGFYFYVNTVSGDIAT 215
           +I+ C+K     HQ+ A+ ++L RE  WN +  R   + DL        ++N +S    +
Sbjct: 383 AILSCLK----KHQKQALTFLLQREAGWNLDP-RSADFWDLRQTSQAICFINRISKSCHS 437

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLA 253
              P   +F GG+  D  GLGKT+T +SLI   +G + 
Sbjct: 438 NEPP---EFRGGIVADPMGLGKTLTMISLIATDKGQVV 472


>gi|323332493|gb|EGA73901.1| Rad5p [Saccharomyces cerevisiae AWRI796]
          Length = 1169

 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 268/650 (41%), Gaps = 113/650 (17%)

Query: 544  GLASPILGSYAAG----ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRL 599
             LA PIL +   G    +  G  K   A+ L+      ++  +    +D   FD+    +
Sbjct: 515  SLAKPILKTMIKGGILSDEMGLGKTVAAYSLV------LSCPHDNDVVDKKLFDIENTAV 568

Query: 600  ALCEP---LDSVRLYLSRATLIVVPSYLVDHWKTQIQQ-HVRPGQLHLFVW---TDHKKP 652
            +   P    D+ + Y S+ TLIVVP  L+  W  +  + +  P   H   +       K 
Sbjct: 569  SDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKT 628

Query: 653  SAHSLAWDYDVVITTFNRLSAEWGRRKK-----------SPMMQVHWLRVMLDEGHTLGS 701
                      VV+TT+  +  EW +  K           S +  V++ R+++DEGH + +
Sbjct: 629  LLTKTKTPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRN 688

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
               +T+K  MA  L    +W+LTGTP  N    +L  L  ++KFL  + + Q    W   
Sbjct: 689  RTTVTSKAVMA--LQGKCKWVLTGTPIIN----RLDDLYSLVKFLELDPWRQ-INYWKTF 741

Query: 762  ILRPFEAEMEEGRSRLLQ------LLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHA 813
            +  PFE++  +    ++       LL R      K     + L  KEV    L F++   
Sbjct: 742  VSTPFESKNYKQAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQD 801

Query: 814  GTYNELV----VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKV 869
              Y  L+    V+V+  I   D         LL  K++      I  LR  CC  G I  
Sbjct: 802  LLYKFLLDKAEVSVKSGIARGD---------LL--KKYSTILVHILRLRQVCCHPGLIGS 850

Query: 870  TDAG-EDIQETMDVLVENG--LDPLSQ------EYAFIKYNL----------LNGGNCLR 910
             D   ED+ +   ++ E    LD L +      + +F K  L                 +
Sbjct: 851  QDENDEDLSKNNKLVTEQTVELDSLMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQ 910

Query: 911  HILCLDCVA--MDSEKCSLPGCG--------FLY-EMQSPEILTRPENPNPKWPVPQDLI 959
             + C  C    MD +K     CG        F Y E Q+ + L   + PN +  +  D  
Sbjct: 911  SLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLGL-KCPNCRNQI--DAC 967

Query: 960  ELQPSYRQWSNTNTFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIH 1005
             L    +  SN+   L+   Y P  +S+K              +  ++V+IFSQF  ++ 
Sbjct: 968  RLLALVQTNSNSKN-LEFKPYSPASKSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLD 1026

Query: 1006 VIEQQLT------VAGI-KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDL 1058
            ++E++LT      VA I KF G  S    ++ +    +  +    + LL   +  +GL+L
Sbjct: 1027 ILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNL 1086

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            +  +  ++M+P W  SME+Q I R HR+G T  + V    ++ ++EE+ML
Sbjct: 1087 TCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKML 1136



 Score = 48.5 bits (114), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 37/119 (31%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE----------------------------------WNAEV 187
             KL+L  +Q+  + WML RE                                  W A+ 
Sbjct: 432 VFKLELRNYQKQGLTWMLRREQEFAKAASDGEASETGANMINPLWKQFKWPNDMSWAAQN 491

Query: 188 LRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           L+      +  EDG +FY N  SG+ +           GG+  DE GLGKT+ A SL+L
Sbjct: 492 LQQD---HVNVEDGIFFYANLHSGEFSLAKPILKTMIKGGILSDEMGLGKTVAAYSLVL 547


>gi|366987181|ref|XP_003673357.1| hypothetical protein NCAS_0A04120 [Naumovozyma castellii CBS 4309]
 gi|342299220|emb|CCC66970.1| hypothetical protein NCAS_0A04120 [Naumovozyma castellii CBS 4309]
          Length = 1137

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 142/585 (24%), Positives = 236/585 (40%), Gaps = 113/585 (19%)

Query: 608  VRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDY----DV 663
            ++ Y S+ TLIVVP  L++ W T+  +      +   ++      S   L         V
Sbjct: 549  LKPYASKTTLIVVPMSLLNQWNTEFNKANNSSDMRSEIYYGGNVSSLKKLLTKTHNPPTV 608

Query: 664  VITTFNRLSAEWGR-----------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
            VITT+  + +EW +           +  S +  V + R+++DEGHT+ +   LT+K  M 
Sbjct: 609  VITTYGIVQSEWSKIFKKQNIGAEIQSSSGLFSVDFYRIVIDEGHTIRNRTTLTSKAIM- 667

Query: 713  ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE-ME 771
              LT+  +W+LTGTP  N    +L  L  +++FL  E + Q    W   +  PFE +  +
Sbjct: 668  -DLTSKCKWVLTGTPIIN----RLDDLYSLVRFLKLEPWSQ-IGYWKMFVSTPFENKNFK 721

Query: 772  EGRSRLLQLLHRCMISARK--TDLQTIPLC---IKEVTF--LNFTEEHAGTYNELVVTVR 824
            +    +  +L   ++   K   D+   PL     KEV    L  ++     Y  L+    
Sbjct: 722  QAFDVVNAILEPVLLRRTKQMKDIDGKPLVELPPKEVIVERLKLSKAQNAVYKYLLDRAE 781

Query: 825  RNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAG-EDIQETMDVL 883
            +++++           LL  KQ+      I  LR  CC    I   D   EDI +    L
Sbjct: 782  QSVILGLARG-----DLL--KQYSTILVHILRLRQVCCDVKLIGAQDENDEDISQGNQQL 834

Query: 884  ---------------------------VENGLDPLSQEY-AFIKYNLLNGGNCLRHILCL 915
                                       ++N +D + ++Y   I +  L    C    + L
Sbjct: 835  IKDSSELDKILKNTDTDVSNNAFSKEDIDNAIDRIMKKYNPQIDFPALECSICTTDPIPL 894

Query: 916  DCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQ-PSYRQWSNTNTF 974
            D +     +C  P C    E    E        N         +EL+ P+ R+  N+N  
Sbjct: 895  DKIVF--TECGHPFCESCIE----EYFEFQAGKN---------LELKCPNCREQINSNRL 939

Query: 975  L----------KQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIHVIEQQ 1010
            L          K   Y  NL+  K              +  ++V+IFSQF  ++ ++E +
Sbjct: 940  LTVEKIEAETFKLKHYENNLKPAKLSALLKHLQLLQDSSAGEQVVIFSQFSSYLDILEDE 999

Query: 1011 LT------VAGI-KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTR 1063
            L       VA I KF G  S    S  ++   +       + LL   +  +GL+L+  + 
Sbjct: 1000 LKEAFPTDVAKIYKFDGRLSLKERSTVLQDFQIKDLSRQKILLLSLKAGGVGLNLTCASH 1059

Query: 1064 VFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             ++M+P W  SME+Q I R HR+G T  + V    +  ++EE+ML
Sbjct: 1060 AYMMDPWWSPSMEDQAIDRIHRIGQTNNVKVVRFIIENSIEEKML 1104



 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)

Query: 177 WMLHREWNAE-VLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGL 235
           W     W A+ +  +P+ +     D  +FY N  +G+ +           GG+  DE GL
Sbjct: 455 WPKDMSWTAQKITGNPIEL----HDDIFFYANLHTGEFSEEKPVLKTIMKGGILSDEMGL 510

Query: 236 GKTITALSLIL 246
           GKTI+ L+LIL
Sbjct: 511 GKTISTLALIL 521


>gi|190406072|gb|EDV09339.1| DNA repair protein RAD5 [Saccharomyces cerevisiae RM11-1a]
          Length = 1169

 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 268/650 (41%), Gaps = 113/650 (17%)

Query: 544  GLASPILGSYAAG----ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRL 599
             LA PIL +   G    +  G  K   A+ L+      ++  +    +D   FD+    +
Sbjct: 515  SLAKPILKTMIKGGILSDEMGLGKTVAAYSLV------LSCPHDSDVVDKKLFDIENTAV 568

Query: 600  ALCEP---LDSVRLYLSRATLIVVPSYLVDHWKTQIQQ-HVRPGQLHLFVW---TDHKKP 652
            +   P    D+ + Y S+ TLIVVP  L+  W  +  + +  P   H   +       K 
Sbjct: 569  SDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKT 628

Query: 653  SAHSLAWDYDVVITTFNRLSAEWGRRKK-----------SPMMQVHWLRVMLDEGHTLGS 701
                      VV+TT+  +  EW +  K           S +  V++ R+++DEGH + +
Sbjct: 629  LLTKTKTPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRN 688

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
               +T+K  MA  L    +W+LTGTP  N    +L  L  ++KFL  + + Q    W   
Sbjct: 689  RTTVTSKAVMA--LQGKCKWVLTGTPIIN----RLDDLYSLVKFLELDPWRQ-INYWKTF 741

Query: 762  ILRPFEAEMEEGRSRLLQ------LLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHA 813
            +  PFE++  +    ++       LL R      K     + L  KEV    L F++   
Sbjct: 742  VSTPFESKNYKQAFDVVNAILEPVLLRRTKQMKDKDGKPLVDLPPKEVVSKRLPFSKSQD 801

Query: 814  GTYNELV----VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKV 869
              Y  L+    V+V+  I   D         LL  K++      I  LR  CC  G I  
Sbjct: 802  LLYKFLLDKAEVSVKSGIARGD---------LL--KKYSTILVHILRLRQVCCHPGLIGS 850

Query: 870  TDAG-EDIQETMDVLVENG--LDPLSQ------EYAFIKYNL----------LNGGNCLR 910
             D   ED+ +   ++ E    LD L +      + +F K  L                 +
Sbjct: 851  QDENDEDLSKNNKLVTEQTVELDSLMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQ 910

Query: 911  HILCLDCVA--MDSEKCSLPGCG--------FLY-EMQSPEILTRPENPNPKWPVPQDLI 959
             + C  C    MD +K     CG        F Y E Q+ + L   + PN +  +  D  
Sbjct: 911  SLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLGL-KCPNCRNQI--DAC 967

Query: 960  ELQPSYRQWSNTNTFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIH 1005
             L    +  SN+   L+   Y P  +S+K              +  ++V+IFSQF  ++ 
Sbjct: 968  RLLALVQTNSNSKN-LEFKPYSPASKSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLD 1026

Query: 1006 VIEQQLT------VAGI-KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDL 1058
            ++E++LT      VA I KF G  S    ++ +    +  +    + LL   +  +GL+L
Sbjct: 1027 ILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNL 1086

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            +  +  ++M+P W  SME+Q I R HR+G T  + V    ++ ++EE+ML
Sbjct: 1087 TCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKML 1136



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 37/119 (31%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE----------------------------------WNAEV 187
             KL+L  +Q+  + WML RE                                  W A+ 
Sbjct: 432 VFKLELRNYQKQGLTWMLRREQEFAKAASDGEASETGANMINPLWKQFKWPNDMSWAAQN 491

Query: 188 LRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           L+      +  EDG +FY N  SG+ +           GG+  DE GLGKT+ A SL+L
Sbjct: 492 LQQD---HVNVEDGIFFYANLHSGEFSLAKPILKTMIKGGILSDEMGLGKTVAAYSLVL 547


>gi|449551323|gb|EMD42287.1| hypothetical protein CERSUDRAFT_79878 [Ceriporiopsis subvermispora B]
          Length = 922

 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 134/547 (24%), Positives = 235/547 (42%), Gaps = 66/547 (12%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW-TDHKKPSAHSLAWD--YDVVITTFNRL 671
            ATLIV P+ L+  W  ++Q+    G L + VW   +++    +L  D   DVVIT++  L
Sbjct: 354  ATLIVAPTSLLSQWSEELQRSSTSGTLKVLVWHGQNRRDLEAALEGDNAVDVVITSYGTL 413

Query: 672  SAEWGRRKK---SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
             +E  + ++   SP+ +  WLRV+LDE H   S ++ T +     SL+A  RW +TGTP 
Sbjct: 414  VSEHAKSERTSASPVFETEWLRVILDEAHHCKSRMSKTAR--AVYSLSARRRWAVTGTPI 471

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE----MEEGRSRLLQLLHRC 784
             N    +L  L  +LKFL    +  N   +   I  PF A     +E  +  L  +L R 
Sbjct: 472  VN----RLEDLYSLLKFLDFSPWS-NYTFFRSFITAPFLARDPKAVEAVQIILESILLRR 526

Query: 785  MISARKTD-LQTIPLCIKEVTF--LNFTEEHAGTYNELVVTVRRNILMAD-----WNDPS 836
              + R TD  + + L  KEVT   L F+      Y+ L    +R+    +       + +
Sbjct: 527  EKNMRDTDGRRIVELPPKEVTVEKLEFSPLERKIYDSLYTNAKRDFDQLNEKGLVGRNYT 586

Query: 837  HVESLLNPKQWKFRSTTIR-NLRLSCCVAGH-------IKVTD------AGEDIQETMDV 882
            H+ ++L     + R   +  NL +S    G        I V D       GE      + 
Sbjct: 587  HILAML----MRLRRAVLHPNLVMSRDDGGSREPSVGLIDVNDLIERFSKGEGTNGDANK 642

Query: 883  LVENGLDPLSQEYAF---IKYNLLNGGNCL---RHILCLDCVAMDSEKCSLPGCGFLYEM 936
              E  L  L  +      I +++++    +    H  C DC+    E C   G     E 
Sbjct: 643  FAEQVLANLGDDDETECPICFDVMSEPMLIPQCAHKSCKDCIVAFIETCRDKG----EEG 698

Query: 937  QSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPN------LESNKAL 990
            + P     P   +    V +D         Q       L+++ +R +      L++ + L
Sbjct: 699  RCPTCSRGPVKESDLLEVVRDKDAKADESTQGPTPTFALRRNDFRSSTKLDALLQNLRRL 758

Query: 991  PD-----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
             D     + ++FSQF   + +I+  L    + +      M    + +++  F+  +    
Sbjct: 759  RDQDPCFRAVVFSQFTTFLDLIQTALERERLMWYRFDGSMDLKKRNEAIAEFKSSSREPK 818

Query: 1046 LLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTV 1103
            +L+    +  +GL+L+    VF+M+  W+ + E Q + R HR+G  R ++V+   + GT+
Sbjct: 819  VLIISLKAGGVGLNLTNANHVFMMDCWWNAATENQAVDRVHRIGQERTVYVKQFIISGTI 878

Query: 1104 EEQMLEF 1110
            E ++L+ 
Sbjct: 879  EGRILQI 885



 Score = 44.3 bits (103), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 20/109 (18%)

Query: 165 LKLFPHQQAAVEWMLHREWNAEVLR-----HPLY-------------IDLATEDGFYFYV 206
           L L  +Q+ A+ WM   E  A   R     HPL+             IDL T D   FY 
Sbjct: 211 LTLRGYQKQALLWMYSIETGAASAREERSMHPLWKEYVFPAEPDQGVIDL-TSDDMPFYF 269

Query: 207 NTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADP 255
           N  SG+++      +R   GG+  D  G+GKTI  LS +++T  +  +P
Sbjct: 270 NEYSGELSLDFPKAVRTTRGGILADVMGMGKTIM-LSALIQTARSPEEP 317


>gi|171679323|ref|XP_001904608.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939287|emb|CAP64515.1| unnamed protein product [Podospora anserina S mat+]
          Length = 997

 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 228/532 (42%), Gaps = 82/532 (15%)

Query: 607  SVRLYLSRATLIVVPSYLVDHWKTQIQ----QHVRPGQLHLFVWTDH-----KKPSAHSL 657
            S  +  SR+TL+V PS    +    ++    +H  PG +    W  H     +   +   
Sbjct: 472  SAAVVASRSTLVVCPSSHCHNKNVCLELTCPRHTYPGYI---TWHKHHGQGRQDDRSRKQ 528

Query: 658  AWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTA 717
              + DVV+TT+  ++AE  R+ ++ +  + W R++LDE H + +    T + Q    L A
Sbjct: 529  LLENDVVLTTYATVAAEL-RKGQAVLRFIDWFRIVLDEAHEIRNPS--TKQHQATAELRA 585

Query: 718  SNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL 777
             +RW LTGTP  N     +  L  ++ FL   +        +    R + A +   +SR 
Sbjct: 586  QHRWCLTGTPIQNA----VDDLGALVSFLRVPS------VENPATFRKYIANLSTAKSRE 635

Query: 778  ----LQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWN 833
                L++L   +   R  D+  +P    ++  +  T      Y  +    RR I   D  
Sbjct: 636  RFKNLRVLLGSICLRRTRDILGLPDPEPKLRGVELTPAERQEYKNIEQQCRREI---DRA 692

Query: 834  DPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGE-------DIQETMDVLVEN 886
               H    LN    +    ++  LRL C     I   ++G        D+ E +  L +N
Sbjct: 693  VSGHGRGKLNSTVLE----SLLKLRLFC--NNGIPKRESGTASPMPQMDMDEVLSYLQQN 746

Query: 887  GLDPLS----QEYAFIKYNLLNGG----NCLRHILCLDCV----AMDSEKCSLPGCGFLY 934
                 S    Q Y+       +GG    +CL H++C  C+    A DS+ C L   G   
Sbjct: 747  NEADCSFCFRQVYSINDRPDTDGGLLLPDCL-HLVCRACMPQYHAADSQ-CPLHPVG--- 801

Query: 935  EMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKV 994
            ++Q    L    +  PK P             Q+ +    L +D+       +  L  K 
Sbjct: 802  QVQHSLPLGNTSHTTPKIPT------------QYPSKLLALLKDI-------SMHLSQKS 842

Query: 995  IIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSAS 1053
            IIFS + + +++I + LT   I F  ++  +    +I+ L  FR  +    LLM  G+ +
Sbjct: 843  IIFSSWKKTLNLISELLTSYRIPFYCIHGSLSLGERIRILKDFRSSSGANVLLMTLGTGA 902

Query: 1054 LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            +GL+L+  +R++LMEP W+ S+E Q I RA R+G T  + +    ++ T+E+
Sbjct: 903  VGLNLAVASRIYLMEPQWNPSVELQAIGRALRLGQTEQVAIVRYIVKHTIED 954


>gi|241950577|ref|XP_002418011.1| DNA repair protein, putative [Candida dubliniensis CD36]
 gi|223641350|emb|CAX43310.1| DNA repair protein, putative [Candida dubliniensis CD36]
          Length = 1088

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 176/725 (24%), Positives = 288/725 (39%), Gaps = 155/725 (21%)

Query: 512  KEHYLL-INSMTKKALTWLA----------------KLSPDELSEMETTGLASPILGSY- 553
            KE++ L + S  K  L+W+                 KLS     E+E  G  +P+   Y 
Sbjct: 361  KENFALDLRSYQKHGLSWMLAREKELDVLEILSNEDKLSSQSRKELENMGTMNPLWRKYK 420

Query: 554  ---AAGETQG-----FHKIFQA------FGLIRRVEKGITRWYYPKTLDNLAFDLAALRL 599
               A   TQ        K F A        L R + K   R         L   +A L L
Sbjct: 421  WPYATEATQDPTQNQTEKYFYANMYNGELSLERPIIKSSLRGGILADEMGLGKTIATLAL 480

Query: 600  ALCEPLD------SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS 653
                P D      S R Y S+ TLIVVP  L+  WK++ ++       H F    + +  
Sbjct: 481  VNSVPYDNFPEAKSDRPYASQTTLIVVPMSLLFQWKSEFEK-CNNNSRH-FCRLHYGEDQ 538

Query: 654  AHSLAWD----------------YDVVITTFNRLSAEWGRRKKSP---MMQVHWLRVMLD 694
              +LAW                 Y  V+  F RLS     + + P   +  V + R++LD
Sbjct: 539  ETNLAWSLCNPDKSKIPIVVITTYGTVLNEFTRLSKRRNSKGEFPKIGLYSVKFFRIILD 598

Query: 695  EGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQN 754
            EGH + +    T K      L +S +W+LTGTP  N    +L  L  + KFL  + +  N
Sbjct: 599  EGHNIRNRNTKTAK--SVYELQSSRKWILTGTPIVN----RLDDLFSLAKFLELDPWN-N 651

Query: 755  QKAWDGGILRPFEAE-----MEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTF--LN 807
               W   +  PFE +     ++  +S L  +  R   S +K     + L  KEV    + 
Sbjct: 652  FSYWKTFVTLPFEHKKISQTLDVVKSILEPIFLRRTKSQKKNGKPLVELPAKEVVIEQIK 711

Query: 808  FTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC----V 863
            F E+    Y        ++   A + +      LL  +++    T I  LR  CC    +
Sbjct: 712  FNEDEEKLYQWF-----KDRAYASFAEGIKSGQLL--RRYTQILTHILRLRQVCCHVDLI 764

Query: 864  AGHIKVTD------AGEDIQETMDVLVENGL----DPLSQEYAFIKYNLLNGGN----CL 909
             G  ++ D        E++++ +  + EN +    D   +E  +  Y  +   N    C 
Sbjct: 765  GGAHEMDDEIIEAEQDEEMRKFLSSIKENQIRFASDTDVKEIMYNLYGKIKEENECSICT 824

Query: 910  R--------------HILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVP 955
            +              H  CL C+        L    F  E++  ++     +P  K+ + 
Sbjct: 825  QVPIPYSEMVVTPCAHTFCLSCI--------LEHLDFQKELKKEKLCPNCRSPISKYQLF 876

Query: 956  QDLIELQPS-------YRQWSNTNTFLKQDLYRPNLESNK--AL-----------PD-KV 994
            +  I  QP+       + Q    +   +  LY PN  S+K  AL           P+ KV
Sbjct: 877  R--IRKQPTRGNEIRFHTQKYAPDYDFQLYLYDPNRSSSKIQALIRHLKALHSQSPNSKV 934

Query: 995  IIFSQFLEHIHVIEQQLTVAG-----IKFAGMYSPMHSSNKIKSLDMFRH--DASCLALL 1047
            I+FSQF  ++ +I  +L +A       KF G    ++ +++ K L+ F    D   +A+L
Sbjct: 935  IVFSQFSSYLDIIHSELKLASEDFIVFKFDGR---LNMNDRTKLLESFNQPLDNGKIAIL 991

Query: 1048 MDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            +    +  +GL+L+  +R ++M+P W  S+E+Q I R HR+G    + V    M  ++E 
Sbjct: 992  LLSLKACGVGLNLTTASRAYMMDPWWSPSIEDQAIDRIHRIGQNETVKVVRFIMENSIET 1051

Query: 1106 QMLEF 1110
            +ML+ 
Sbjct: 1052 KMLKI 1056


>gi|449485544|ref|XP_002190618.2| PREDICTED: transcription termination factor 2-like [Taeniopygia
            guttata]
          Length = 1108

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 131/567 (23%), Positives = 240/567 (42%), Gaps = 76/567 (13%)

Query: 585  KTLDNLAFDLAALRLALCEPLDSVRLYLSR---------ATLIVVPSYLVDHWKTQIQQH 635
            KTL  +A  LA  +L   +  +++ ++LS+          TL++ P+ L+ HWK +I++ 
Sbjct: 544  KTLTMIALILAQKQLKTEKRKETIEIWLSKNDFTVTPSHGTLVICPASLIHHWKKEIERR 603

Query: 636  VRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKK--------------- 680
            V  G+L ++++    +     +   YDVV+TT++ LS E    K+               
Sbjct: 604  VAFGKLRVYLYHGANRDKRAEVLSGYDVVVTTYSLLSKEVPTAKEEGEVPAQDHDVGSGS 663

Query: 681  ---SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS---LTASNRWLLTGTPTPNTPN 733
               SP+++V W R++LDE H      N+ N ++Q +I+   L AS RW +TGTP  N   
Sbjct: 664  STCSPLLRVAWARIILDEAH------NIKNPRVQTSIAVCKLRASARWAVTGTPIQNN-- 715

Query: 734  SQLSHLQPMLKFLHEEAYGQNQKAW----DGGILRPFEAEMEEGRSRLLQLLHRCMISAR 789
              L  +  +L+FL    + +  K W    D    +  E      RS LLQ     + SA 
Sbjct: 716  --LLDMYSLLRFLRCSPFDE-YKVWKYQVDNNTRKGGERLSLLTRSLLLQRTKDQLDSAG 772

Query: 790  KTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKF 849
            K  L ++P    ++  L  T E    YN L    R           S ++S L  ++ K 
Sbjct: 773  KP-LVSLPQRRTKLHQLKLTAEEQSVYNVLFARSR-----------STIQSYLKRQEQKN 820

Query: 850  RSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL 909
                           G+    DA E      + L  +           +   LL    C 
Sbjct: 821  EDREYD--------GGNPFEKDAQEFGISRKEFLAGSQSASQVSSTVHVLSMLLRLRQCC 872

Query: 910  RHI----LCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSY 965
             H+    + LD V ++SE  +L     + E      L+  + P+ +  V  +    +   
Sbjct: 873  CHLSLLKMALDQVNLNSEGLALS----IEEQLGALTLSELQTPDSESTVYLNGTAFKTDI 928

Query: 966  RQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPM 1025
               +  +T + Q L       +   P K ++ SQ+   + V+   L   G+K A +   +
Sbjct: 929  FDITRESTKVAQLLAELKTIQSHPEPQKSVVVSQWTSMLKVVAVHLQRLGLKCATVDGSV 988

Query: 1026 HSSNKIKSLDMFRHDASCLALLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRA 1083
            +   ++  ++ F ++     +++    +  +GL+L+    +FL++  W+ ++E+Q   R 
Sbjct: 989  NPKQRMDVVEEFNNNPKGPQVMLVSLLAGGVGLNLTGGNHLFLLDMHWNPALEDQACDRI 1048

Query: 1084 HRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +R+G  + + +      GTVEE +L+ 
Sbjct: 1049 YRVGQKKDVVIHRFVCEGTVEENILQL 1075


>gi|449669298|ref|XP_002160965.2| PREDICTED: helicase-like transcription factor-like [Hydra
            magnipapillata]
          Length = 867

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 226/501 (45%), Gaps = 73/501 (14%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            RATLIV P  ++ +W+ QI+ H+    L ++ +  + K     L    DVV+TT+  L +
Sbjct: 369  RATLIVCPVSVLSNWQEQIKTHLIENSLDVYTYYGNDKMQDPELLSKKDVVLTTYQTLCS 428

Query: 674  EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
            ++  +  S + +V WLRV+LDE H + ++   T++ +  ++L A  RWL+TGTP  N+  
Sbjct: 429  DF--KVSSTLHKVKWLRVILDESHVIRNT--STSQSKACLALDAERRWLITGTPVQNS-- 482

Query: 734  SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT-- 791
              +  L  ++ FL  E + + ++ W   + RP +   +    RL +L+   +IS R+T  
Sbjct: 483  --IKDLWSVVNFLRIEPFTK-REWWTRSVERPIQNNEKGSIKRLQKLMS--IISLRRTKS 537

Query: 792  ------DLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHV-ESLLNP 844
                   L  +P     +  +  T+E    YN +     R+IL       S+V E+ LN 
Sbjct: 538  NKVDGKSLIELPEKTIFIQKIKLTKEERDLYN-MFKNEGRSIL------ESYVKENSLN- 589

Query: 845  KQWKFRSTTIRNLRLSCC--------------VAGHIKVTDAGEDIQETMDVLVENG--- 887
            + +      +  LR  CC               +     T+  + +Q+ + VL+ +G   
Sbjct: 590  ENFAHVLVVLMRLRQLCCHPKLCMQIVDFASKFSHSTSSTEFVKKLQQILSVLLSSGDEE 649

Query: 888  ----LDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILT 943
                LD L+Q             +C  H+ C  C+  D  +   P C    +  + + L 
Sbjct: 650  CPVCLDSLNQPVI---------THCA-HLFCKQCIE-DVIRTDKPKCPLCRKEVTKDKLV 698

Query: 944  RPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEH 1003
             PE       V +D   +  S  +WS+++  +   +   N E  +    K ++ SQF   
Sbjct: 699  EPE-------VNEDNPSITCS-EKWSSSSK-VDTLITLLNKEKEENACRKHLVVSQFSSF 749

Query: 1004 IHVIEQQLTVAGIKFA---GMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSF 1060
            + ++E+ L+ +  KF    G  S    +  I         +  + LL   +  LG++L+ 
Sbjct: 750  LDLLEKPLSESHYKFVRLDGKMSFQQRNTAISLFSSVSDSSPTIMLLSLKAGGLGINLTK 809

Query: 1061 VTRVFLMEP-IWDRSMEEQVI 1080
             TRVFLM+P I + S+EE+++
Sbjct: 810  ATRVFLMDPFIVEDSVEEKML 830


>gi|310800231|gb|EFQ35124.1| WD domain-containing protein [Glomerella graminicola M1.001]
          Length = 1215

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 122/532 (22%), Positives = 226/532 (42%), Gaps = 67/532 (12%)

Query: 616  TLIVVPSYLVDHWKTQIQQHVRPGQL--HLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            TLIVVP  L+  W+ ++ +H  P +L  HL+   + ++ +   +  +  +++TT++ +S 
Sbjct: 213  TLIVVPPALLGTWEEELYRHTEPQRLPWHLYRGKNRQRQTEKLV--NMTILLTTYHTVST 270

Query: 674  EW---GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTP 729
            EW        S +    W RV+LDE H + +S    +K+  A+ ++ + +RW + GTP  
Sbjct: 271  EWRTGAGHASSILFTTRWRRVILDEAHYIRNSY---SKMASAVCAIDSVSRWAVLGTPIQ 327

Query: 730  NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISAR 789
            N     L+ L  +LKFL    Y  +++ +D  I   ++A  +    + L+ L  C++  R
Sbjct: 328  N----HLNDLATLLKFLSVYPY-NHKRVFDADISHMWKAGNDFEAVKRLKRLAGCLLLRR 382

Query: 790  KTDLQTIPLCIKEVTFLNFTEEHAGTYNEL----VVTVRRNILMA--DWNDPSHVESLLN 843
                  +P       ++ F  +    YN++    +  + R +L    D   PS    L  
Sbjct: 383  PRKTVELPPRHDRACYVEFQPDERELYNQIRSQTIAQIDRVLLQGNHDKGAPSTFTVL-- 440

Query: 844  PKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLL 903
                      I  +RL C + G    +        T     ++       E+ F ++N +
Sbjct: 441  --------QQIVGMRLVCNL-GLFYPSRHDTSALATNKPTTKDWNQAAQSEFNF-RFNEM 490

Query: 904  NGGNCLRHILCLDCV--------AMDS--EKCSLPGCGFLYEMQSPEILTRPENPNPKWP 953
               +C      LD          A +S   +CS   C       + +I T     NP  P
Sbjct: 491  GSIHCHLCAFTLDAAYTPLDDPGATNSSFSRCSKFFCPSCVRAAARDINTSKCGHNPPCP 550

Query: 954  VPQ--------DLIELQPSYRQWSNTNTFLKQDLYRPN-----LESNKALPD--KVIIFS 998
            +          + I +  S  Q + +        Y P      +E  +A P   K ++FS
Sbjct: 551  IASVSTSAASLETIPISMSIEQIAGSG-------YLPTKVAALIEGLQATPSDVKCVVFS 603

Query: 999  QFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS-ASLGLD 1057
                 + V+E  L   GI        +    + + ++ FR+D S   LL+  S  ++GL+
Sbjct: 604  TCTMTLDVVEVGLGQVGISVLRYDGKVPHKERQRVVERFRNDPSIRVLLLTLSCGAVGLN 663

Query: 1058 LSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            L+  +R +LMEP W+ ++++Q ++R HRMG    +      +R + EE +++
Sbjct: 664  LTAASRAYLMEPNWNPTLQDQALARIHRMGQENEVTTIQFYIRDSFEEVVVK 715



 Score = 43.1 bits (100), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 13/117 (11%)

Query: 161 PCMKLKLFPHQQAAVEWMLHRE--WNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTA 218
           P +   L  HQ+ A+ +ML RE  W  +  R  ++    TE G  F  N +SG       
Sbjct: 104 PAIATPLKRHQKQALTFMLRREQGWAFDGTRPEIWEAEETEIGIRF-ANRISGTRQAQEP 162

Query: 219 PTMRDFHGGMFCDEPGLGKTITALSLILKT--QGTLADPPDGVKIIWCTHNGDPRCG 273
           P    F+GG+  D  G GKT+  ++L+        L+D P    ++     G+  CG
Sbjct: 163 PA---FYGGIIADPMGFGKTLAMITLVASDSYNTALSDAPKLSGVL-----GEDSCG 211


>gi|320592092|gb|EFX04531.1| DNA excision repair protein [Grosmannia clavigera kw1407]
          Length = 992

 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 142/603 (23%), Positives = 254/603 (42%), Gaps = 103/603 (17%)

Query: 578  ITRWYYPKTLDNLAFDLAALR-----------LALCEPLDSVRLYLS-----RATLIVVP 621
            I+R   P  L+ LA+ +A  +           + L + + +V L +S     + TL++VP
Sbjct: 385  ISRNLKPFQLEGLAWMIAMEKAKWKGGLLGDEMGLGKTIQAVSLIMSDYPAKKPTLVLVP 444

Query: 622  SYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTFNRLSAEWGR- 677
               +  W T+I  +   G+L  F++      +      D   YDV+I ++N L + + + 
Sbjct: 445  PVALMQWTTEIASYT-DGRLKTFIYHGTNAKTKGMTVKDIKQYDVIIMSYNSLESVYRKQ 503

Query: 678  -----------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
                       ++KS + Q  + RV+LDE H + +   +T K     +L    RW LTGT
Sbjct: 504  EKGFVRVKGVYKEKSVIHQTSFHRVILDEAHCIKTRSTMTAK--ACFALNVDFRWCLTGT 561

Query: 727  PTPNTPNSQLSHLQPMLKFLHEEAYG------------------------------QNQK 756
            P  N    ++     +L+FL  E +                               ++  
Sbjct: 562  PLQN----RIGEFFSLLRFLVVEPFSNYICRDCKCSKLEWSVDENNYCRHCKHRGMRHLS 617

Query: 757  AWDGGILRPFE--AEMEEGRS--RLLQLL-HRCMISARKTD-LQTIPLCIKEVTFLN--F 808
             ++  +L P +    +  G+S  R L+LL  R M+   K D   ++ L +KEV      F
Sbjct: 618  VFNQELLNPIQRYGNLGPGQSAFRNLRLLTDRIMLRRLKKDNTDSMELPVKEVVVDRQFF 677

Query: 809  TEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIK 868
            +E      N ++   +R          ++VE+ +    +      I  +R    VA H  
Sbjct: 678  SEVETDFANSIMSNTQRQFT-------TYVENRVMLNNYANIFGLIMQMRQ---VADHPD 727

Query: 869  VTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLP 928
            +    ++ + + +VL+    D  ++E    K          +H  C +C          P
Sbjct: 728  LI-LRKNAEGSQNVLICCICDEPAEEAIRSK---------CKHDFCRECAKSYLHATEQP 777

Query: 929  GCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNT--FLKQDLYRPNLES 986
             C   +   S + L +PE    +  V +  I  +     W++++    L  +LYR  L S
Sbjct: 778  DCPRCHISLSID-LEQPEMEQDEIKVKKSSIINRIRMENWTSSSKIELLVHNLYR--LRS 834

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
            +KA   K IIFSQF   + +IE +L  AGI    +   M  + +  S++ F+ +      
Sbjct: 835  DKA-SHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASIEYFKENVDVECF 893

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            L+   +  + L+L+  +RVF+++P W+ + E Q   R HR+G TRP  V  L +  +VE 
Sbjct: 894  LVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQTRPCVVTRLCIEDSVES 953

Query: 1106 QML 1108
            +M+
Sbjct: 954  RMV 956


>gi|342873803|gb|EGU75918.1| hypothetical protein FOXB_13572 [Fusarium oxysporum Fo5176]
          Length = 922

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 131/561 (23%), Positives = 228/561 (40%), Gaps = 75/561 (13%)

Query: 613  SRATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S  TL+V+PS  ++D W+ +I    +P       +    +P    L   +D+V+TT++ L
Sbjct: 393  SSITLVVLPSRQVLDVWQNEIDARFQPQSFKTVTFHGDVRPKKRELLLGHDLVLTTYHTL 452

Query: 672  SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSS-----LNLTNKLQMA-ISLTASNRWLLTG 725
              E   R K  +  + W R++LDE     SS      N + KL  A  +L +  RW LTG
Sbjct: 453  --EKDNRGKGILNSIKWSRIVLDEVLLTNSSKAHQIRNSSIKLHKAPAALESDTRWCLTG 510

Query: 726  TPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEG--RSRLLQLLHR 783
            TP  N+       L+ +LKFL  E + Q+   ++  I++PF  +   G   SR L+++ +
Sbjct: 511  TPIQNS----FDDLRSLLKFLRFEPFCQSN-VFEQHIVKPFREDSPNGNDESRNLKIMLK 565

Query: 784  CMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI-LMADWNDPSHVESLL 842
                 R      +P    +   +  TE     +  ++   + +   MA   + +   ++L
Sbjct: 566  FCCLRRTQAKLDLPASTIQKVDVTPTETEKSMFTSILDQCKEDFDKMAGKEESAKKSNIL 625

Query: 843  NPKQWKFRSTTIRN-LRLSCCVA------------GHIKVTDAGEDIQETMDVLVENGLD 889
                 K R       + +S C +            G    + + E + E  D    N   
Sbjct: 626  FSAIMKLRRVCNHGAIPISACSSKRTNQLIVPKTKGKASRSPSAEPVCEFCDERTGNA-- 683

Query: 890  PLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPN 949
                       +LL G         LD         S P CG L    + E  +   +P+
Sbjct: 684  -----------DLLGG---------LD---------SCPMCGRLQFEMNDEASSLAPSPS 714

Query: 950  PKWPVPQDLIELQPSYRQWSNTNT-FLKQDLYRPNLESNKA------LPDKVIIFSQFLE 1002
            P  P   DL    P  R  S  ++ ++KQ   + +   N           K ++FS + +
Sbjct: 715  PT-PSMMDLDTPDPPTRGISTQSSYYMKQQSSKMSAVINNIKSSCLDASSKSVVFSSWRD 773

Query: 1003 HIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFV 1061
             + ++   L   GI F  +        + + L  F  D     LL+   + ++GL L+  
Sbjct: 774  TLDILATMLGAEGIAFVQVDGRNPLVGRTELLSKFCQDPVIRVLLISINTGAVGLTLTQA 833

Query: 1062 TRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLL 1121
              V ++EP W+ ++EEQ I+R  RMG TRPI +      G++E  +++  +   R  +L 
Sbjct: 834  NMVHIVEPQWNPAIEEQAIARVVRMGQTRPITIFKYITAGSIENTVVKLQEKKTRIIKLS 893

Query: 1122 KEELVKPEREGARSHRTLHDF 1142
             +     +++G  S   L  F
Sbjct: 894  MQ-----DKDGVDSDTNLDSF 909


>gi|46138107|ref|XP_390744.1| hypothetical protein FG10568.1 [Gibberella zeae PH-1]
          Length = 786

 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 210/483 (43%), Gaps = 55/483 (11%)

Query: 635  HVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLD 694
            H R G L +  +    + +  +   +YD+V+TTF  L ++  R K   +  V W RV+LD
Sbjct: 349  HFRDGSLRVNTFHGESRSTQSTSLMNYDIVLTTFATLVSDCKRHKV--LQSVEWFRVVLD 406

Query: 695  EGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQN 754
            E H + +    + + + A SL    RW L+GTP  N  N  +S    +L+F   E +  N
Sbjct: 407  EAHWIRNPS--SKQFKAADSLATERRWCLSGTPIQNCINDLVS----LLRFFKFEPFS-N 459

Query: 755  QKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAG 814
               +   IL P   E   G +  LQ+L + +   R      +P    E+  L+   +   
Sbjct: 460  MDVFRQYILEPLRTENVLGSTNPLQMLLQSVCLRRTEKYLNLPAAHYELITLSLHHDEQN 519

Query: 815  TYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGE 874
             Y+++    R     ++ +D     + ++ K+   R + I  LR   C  G +       
Sbjct: 520  LYSDVFRKYR-----SELDDLVSSLTKMDKKKATLRFSMISELR-RLCNHGTL------- 566

Query: 875  DIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCS-LPGCGFL 933
                         L+P          N L+      ++ C  C A + +  + L G    
Sbjct: 567  -------------LEP---------PNTLDDATL--NVSCDYCNAAEKDNMAKLNGDSMC 602

Query: 934  YEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDK 993
             E Q     + P + N +    Q L  L+   R     +T L+       L S     D+
Sbjct: 603  PECQRSLSPSTPSHSNSRSQSVQ-LSSLEEPARIHLGLSTKLQSVADNICLRSKST--DR 659

Query: 994  V-IIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            V ++FS +   +++++  L   GI    +   + +  +++ L+ F++D +   LL+   +
Sbjct: 660  VSLVFSYWTTTLNLLQTMLEDRGIVLRRIDGSLGNGERLRVLNEFKNDPAISVLLITMQT 719

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE---QML 1108
             ++GL L+  T+V ++EP W+ S+EEQ I+RA RMG +  + V    M+ TVEE   Q +
Sbjct: 720  GAVGLTLTVATQVHIIEPQWNPSVEEQAIARALRMGQSNIVKVFRYIMKNTVEEMEAQEM 779

Query: 1109 EFL 1111
            E+L
Sbjct: 780  EYL 782


>gi|302906263|ref|XP_003049441.1| hypothetical protein NECHADRAFT_106263 [Nectria haematococca mpVI
            77-13-4]
 gi|256730376|gb|EEU43728.1| hypothetical protein NECHADRAFT_106263 [Nectria haematococca mpVI
            77-13-4]
          Length = 750

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 132/533 (24%), Positives = 218/533 (40%), Gaps = 80/533 (15%)

Query: 612  LSRATLIVVPS-----YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVIT 666
            L   TL+V+PS      L+DH    I +  RP  L   ++  +++     L  + DVV+T
Sbjct: 248  LREKTLVVLPSRPTQWILIDHSLLTIYRRFRPQTLRTAIFHGNRRAKEGQLLLESDVVLT 307

Query: 667  TFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKL-QMAISLTASNRWLLTG 725
            T++ L  E   +K   +  + W RV+LDE H +    N + KL + A++L +  RW LTG
Sbjct: 308  TYHTL--ENDSKKTKILQSIKWTRVVLDEAHQIR---NPSTKLFKAAVALESEARWCLTG 362

Query: 726  TPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS--RLLQLLHR 783
            TP  N+    L  L+ +LKFL  E + Q  K  +  I+RP   + E G S  R L++L +
Sbjct: 363  TPIQNS----LDDLRSLLKFLRFEPFCQ-PKVLEEHIVRPMRKDPEPGSSTARNLRILLK 417

Query: 784  CMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI-LMADWNDPSHVESLL 842
                 R   L  +P        +  T      + +++   R    LMA  +      ++L
Sbjct: 418  TCCLRRTQTLLDLPSVTTREVLVKPTMAEKARFAQILEQCRAEFDLMASQDTCRKTPNVL 477

Query: 843  NPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDV---LVENGLDPLSQEYAFIK 899
                 K R           C  G  ++   G    + + V   L +N   P +       
Sbjct: 478  FSAVVKLRQV---------CNHGIAQINGTGARGSDRLTVPRTLKKNSRPPSADP----- 523

Query: 900  YNLLNGGNCLRHILCLDCVAMDSEKCSLPG----CGFLYEMQSP-EILTRPENPN--PKW 952
                         +C  C A D E   L G    C     +QS     + P  P+  P  
Sbjct: 524  -------------VCDFCCAQDEEDDILLGALDCCPLCGRVQSEGNDTSSPSTPSLRPCS 570

Query: 953  PVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLT 1012
            P     + L        N  +F               +P+ +++ S+       +     
Sbjct: 571  PFASGGVSLN-----QMNAASF------------ASGMPNHLLLDSELAGQSSKLSA--V 611

Query: 1013 VAGIKFAGMYSPMHS---SNKIKSLDMFRHDASCLALLMDG--SASLGLDLSFVTRVFLM 1067
            V  IK +G+     S   ++   +LDM     S + +L+    + ++GL L+    V ++
Sbjct: 612  VDNIKSSGLEEDSKSVVFTSWRTTLDMLAGILSNIRVLLISINTGAVGLTLTKANVVHIV 671

Query: 1068 EPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRL 1120
            EP W+ ++EEQ I+R  RMG TRP+ V    M  +VE+ +++  Q   R  +L
Sbjct: 672  EPQWNPAIEEQAITRVVRMGQTRPVTVFKYIMNESVEQGVVKLQQRKTRIVKL 724


>gi|336364831|gb|EGN93185.1| hypothetical protein SERLA73DRAFT_172337 [Serpula lacrymans var.
            lacrymans S7.3]
          Length = 1051

 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 128/560 (22%), Positives = 236/560 (42%), Gaps = 89/560 (15%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD-------VVITT 667
            ATLIV P+ L+  W  +IQ+   PG + + VW    +    +   + +       VV+T+
Sbjct: 482  ATLIVAPTSLLSQWSEEIQRSSEPGTVKVTVWHGQNRLDLTAATEEDNENDKSIKVVVTS 541

Query: 668  FNRLSAEWGRRKK----SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
            +  L++E  +  K    S + QV WLRV+LDE H   S ++ T +   A  L A  RW +
Sbjct: 542  YGVLASEHSKISKSGGQSAVFQVEWLRVILDEAHHCKSRVSKTARAVYA--LHARRRWAV 599

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTP  N    +L  L  +LKFL    + +    +   I  PF A  +     ++Q++  
Sbjct: 600  TGTPIVN----KLEDLYSLLKFLGFTPWSE-YPFFRSFITVPFLAR-DPKAIEIVQVILE 653

Query: 784  CMISARKTDL------QTIPLCIKEVTFLN--FTEEHAGTYNELVVTVRRNILMADWN-- 833
             ++  R+ ++      + I L  KEVT  N  F+      Y+ +    +++    +    
Sbjct: 654  SVLLRREKNMRDSNGKRIIELPAKEVTVENLPFSSSEQAIYDSIYKDAKKDFDQLNAKGI 713

Query: 834  ---DPSHVESLLNPKQWKFRSTTIR-NLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLD 889
               + +H+ ++L     + R   +  +L  S     + K  D   D+ E M    ++   
Sbjct: 714  VSRNYTHILAML----MRLRRAVLHPDLVASPTEEPNGKSRDGAVDVDEIMSTAADSSRS 769

Query: 890  PLSQEYAFIKYNLLNGGN-----CL------------RHILCLDCVAMDSEKCSLPGCGF 932
                +      NL + GN     CL             H  C DC+    E C+  G   
Sbjct: 770  KFFADSVLA--NLKDSGNDECPICLDVMETPTIIPDCMHRCCKDCIISYLEACNERG--- 824

Query: 933  LYEMQSPEILTRPENPNPKWPVPQDLIE-LQPSYRQWSN--------TNTFLKQDLYRPN 983
              E + P     P   +       +LIE ++P     SN            L+++ +R +
Sbjct: 825  -EEGRCPTCSRGPIKDH-------ELIEVIRPKAESSSNLLDGVSAVPEVVLRRNDFRSS 876

Query: 984  ------LESNKALPD-----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIK 1032
                  +++ + L D     + ++FSQF   +++IE  L    + +      M    +  
Sbjct: 877  TKLEALVQNLRRLQDQDPCFRAVVFSQFTSFLNLIEIALERERLAWYRFDGSMDIKKRNH 936

Query: 1033 SLDMFRHDASCLALLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATR 1090
            ++  F+  +    +L+    +  +GL+L+    VF+M+  W+ + E Q I R HR+G  +
Sbjct: 937  AISEFKSASRAPKVLIVSLKAGGVGLNLTNANHVFMMDCWWNAATENQAIDRVHRIGQEK 996

Query: 1091 PIHVETLAMRGTVEEQMLEF 1110
             ++V+   +  T+E ++L+ 
Sbjct: 997  TVYVKHFIIEHTIEGRILQI 1016


>gi|336389941|gb|EGO31084.1| hypothetical protein SERLADRAFT_444658 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 1111

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 128/560 (22%), Positives = 236/560 (42%), Gaps = 89/560 (15%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD-------VVITT 667
            ATLIV P+ L+  W  +IQ+   PG + + VW    +    +   + +       VV+T+
Sbjct: 542  ATLIVAPTSLLSQWSEEIQRSSEPGTVKVTVWHGQNRLDLTAATEEDNENDKSIKVVVTS 601

Query: 668  FNRLSAEWGRRKK----SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
            +  L++E  +  K    S + QV WLRV+LDE H   S ++ T +   A  L A  RW +
Sbjct: 602  YGVLASEHSKISKSGGQSAVFQVEWLRVILDEAHHCKSRVSKTARAVYA--LHARRRWAV 659

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTP  N    +L  L  +LKFL    + +    +   I  PF A  +     ++Q++  
Sbjct: 660  TGTPIVN----KLEDLYSLLKFLGFTPWSE-YPFFRSFITVPFLAR-DPKAIEIVQVILE 713

Query: 784  CMISARKTDL------QTIPLCIKEVTFLN--FTEEHAGTYNELVVTVRRNILMADWN-- 833
             ++  R+ ++      + I L  KEVT  N  F+      Y+ +    +++    +    
Sbjct: 714  SVLLRREKNMRDSNGKRIIELPAKEVTVENLPFSSSEQAIYDSIYKDAKKDFDQLNAKGI 773

Query: 834  ---DPSHVESLLNPKQWKFRSTTIR-NLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLD 889
               + +H+ ++L     + R   +  +L  S     + K  D   D+ E M    ++   
Sbjct: 774  VSRNYTHILAML----MRLRRAVLHPDLVASPTEEPNGKSRDGAVDVDEIMSTAADSSRS 829

Query: 890  PLSQEYAFIKYNLLNGGN-----CLR------------HILCLDCVAMDSEKCSLPGCGF 932
                +      NL + GN     CL             H  C DC+    E C+  G   
Sbjct: 830  KFFADSVLA--NLKDSGNDECPICLDVMETPTIIPDCMHRCCKDCIISYLEACNERG--- 884

Query: 933  LYEMQSPEILTRPENPNPKWPVPQDLIE-LQPSYRQWSN--------TNTFLKQDLYRPN 983
              E + P     P   +       +LIE ++P     SN            L+++ +R +
Sbjct: 885  -EEGRCPTCSRGPIKDH-------ELIEVIRPKAESSSNLLDGVSAVPEVVLRRNDFRSS 936

Query: 984  ------LESNKALPD-----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIK 1032
                  +++ + L D     + ++FSQF   +++IE  L    + +      M    +  
Sbjct: 937  TKLEALVQNLRRLQDQDPCFRAVVFSQFTSFLNLIEIALERERLAWYRFDGSMDIKKRNH 996

Query: 1033 SLDMFRHDASCLALLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATR 1090
            ++  F+  +    +L+    +  +GL+L+    VF+M+  W+ + E Q I R HR+G  +
Sbjct: 997  AISEFKSASRAPKVLIVSLKAGGVGLNLTNANHVFMMDCWWNAATENQAIDRVHRIGQEK 1056

Query: 1091 PIHVETLAMRGTVEEQMLEF 1110
             ++V+   +  T+E ++L+ 
Sbjct: 1057 TVYVKHFIIEHTIEGRILQI 1076


>gi|448514375|ref|XP_003867097.1| Rad5 protein [Candida orthopsilosis Co 90-125]
 gi|380351435|emb|CCG21659.1| Rad5 protein [Candida orthopsilosis Co 90-125]
          Length = 1134

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 143/610 (23%), Positives = 256/610 (41%), Gaps = 112/610 (18%)

Query: 590  LAFDLAALRLALCEPLDSVRL----YLSRATLIVVPSYLVDHWKTQIQQ------HVRPG 639
            L   +A L L    P DS  +    Y S+ TLIVVP  L+  WK + ++      H+   
Sbjct: 516  LGKTIATLALVNSVPYDSAHVEENRYASKTTLIVVPMSLLTQWKEEFEKANNNDSHI--C 573

Query: 640  QLHLFVWTDHK--------KPSAH---SLAWDYDVVITTFNRLSAEW---GRRKKSPMMQ 685
            +L+    T++         KP++     +   Y  ++  + R+S      G   KS +  
Sbjct: 574  RLYYGNETENDLSLSLCNLKPNSKIPIVVITTYGTILNEYTRISKNRNSKGELPKSGLYS 633

Query: 686  VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKF 745
            V + R++LDEGH + +    T K      L ++ +W+LTGTP  N    +L  L  + KF
Sbjct: 634  VKFFRIILDEGHNIRNRNTKTAK--SVYELQSNRKWVLTGTPIVN----RLDDLYSLAKF 687

Query: 746  LHEEAYGQNQKAWDGGILRPFEAE-----MEEGRSRLLQLLHRCMISARKTDLQTIPLCI 800
            L  + +  N   W   +  PFE +     ++  +S L  +  R   + +K     + L  
Sbjct: 688  LELDPWN-NFSYWKTFVTLPFEQKKISQTLDVIKSILEPIFLRRTKNQKKNGKPLVELPE 746

Query: 801  KEVTF--LNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLR 858
            KEV    + F ++ A  YN       ++     + +      L+  +Q+    T I  LR
Sbjct: 747  KEVVIEEIKFNDQEAKLYNWF-----KSRAFESFEEGVKTGQLM--RQYTQILTHILRLR 799

Query: 859  LSCCVAGHIKVTDAGEDIQE-TMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCL-D 916
              CC   H+ +     ++ +  +D+  +  +    +          N     + I  L D
Sbjct: 800  QVCC---HVDLIGGAHEMDDDVIDLEADEEMKTFLKSIKDQSGKFTNDTEVKQIIYKLYD 856

Query: 917  CVAMDSE------------KCSLPGCGFLY---------EMQSPEILTRPENPNPKWPVP 955
            CV  ++E            + ++  CG  +         + QS E+    + PN + P+ 
Sbjct: 857  CVKPENECSICTTSPIPINELTITPCGHTFCFSCILEHLDFQS-ELKRDKQCPNCREPIS 915

Query: 956  QDLIELQPSYRQWSNTNTFLKQD------------LYRPNLESNK--AL----------- 990
            +  +    S +  SN   F  Q+            L+ PN  S+K  AL           
Sbjct: 916  KYKLFRIRSQKTTSNEIRFHTQNRDHHRDYDFQIYLHDPNRTSSKIHALIKHLKSIQINE 975

Query: 991  PD-KVIIFSQFLEHIHVIEQQLTVAG-----IKFAGMYSPMHSSNKIKSLDMFRHDAS-- 1042
            P+ KVI+FSQF  ++ ++E +L +        KF G    ++ +++ K L+ F    +  
Sbjct: 976  PNSKVIVFSQFASYLDILEVELKLTSDDFIVYKFDGR---LNMNDRGKLLNSFNEPLANG 1032

Query: 1043 --CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR 1100
               + LL   +  +GL+L+  +R F+M+P W  S+E+Q + R HR+G    + V    M+
Sbjct: 1033 KIAILLLSLKAGGVGLNLTTASRAFMMDPWWSPSIEDQAVDRIHRIGQNETVKVVRFIMK 1092

Query: 1101 GTVEEQMLEF 1110
             ++E +ML+ 
Sbjct: 1093 NSIETKMLKI 1102


>gi|449303670|gb|EMC99677.1| hypothetical protein BAUCODRAFT_101663 [Baudoinia compniacensis UAMH
            10762]
          Length = 933

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 127/540 (23%), Positives = 227/540 (42%), Gaps = 73/540 (13%)

Query: 616  TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAW------DYDVVITTFN 669
            TL+V P  ++ +W  QI  H+   +  L V T H      S  W       YDV+ITT+ 
Sbjct: 380  TLVVAPLSVMSNWSGQINLHMHQDKA-LKVHTYHGAGRVSS--WKAADFTQYDVIITTYQ 436

Query: 670  RLSAEWGRRKK-------------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS-L 715
             L++++G R K             S +  V W R++LDEGH +    N  +K   A++ L
Sbjct: 437  TLASDFGSRGKVSFDQFSERKLRSSGLYSVGWRRIILDEGHIV---RNPASKGAAAVNGL 493

Query: 716  TASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS 775
             + +RW LTGTP  N+    L  L  +LKF+           ++  ++RP     +    
Sbjct: 494  VSRSRWCLTGTPIVNS----LKDLYSLLKFVGLSGGTDQLAVFNSVLIRPLR-NGDPSAV 548

Query: 776  RLLQLLHRCMISARKTDLQTIPLCIKEVTF----LNFTEEHAGTYNELVVTVRRNILMAD 831
             LLQ +       R  ++  I L + ++      + FT++    Y  LV   R  +    
Sbjct: 549  YLLQAIMAAFTLRRHKEMAFIDLRLPKLDEYMHPIQFTDKEKQRYEALVTEARGLLKNVR 608

Query: 832  WNDPSHVES-----------LLNPKQ----WKFRSTTIRNLRLSCCVAGHIKVTDAGED- 875
               P   E+           LL  +Q    W+     + +L         + +T   E  
Sbjct: 609  RKAPREGETKVQAYQHLLEILLRMRQCCNHWQLCGERVTSLLAQLEAQKTVDLTPENEKA 668

Query: 876  IQETMDVLVENGLD-PLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSE---KCSLPGCG 931
            +Q+ + V +E+  D P+  E   +   ++    C  H+   +C++   E   KC  P C 
Sbjct: 669  LQDMLQVQIESHEDCPVCLES--LHEPVIT--TCA-HVFGRECISKVIETQHKC--PMC- 720

Query: 932  FLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALP 991
               ++    +L  P N         D  + +    Q S+    + Q L      +N    
Sbjct: 721  -RADLPDGSVLVGPAN-----DCGDDSADDEIDLTQSSSKLEAMMQILSATKASANG--- 771

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            DK ++FSQ+   + +++ +L    +K+  +   M ++ +  +L     D  C  +L   G
Sbjct: 772  DKTVVFSQWTRFLDIVQARLDRENMKYCRVDGTMTATQRDAALQALGCDPECTIMLASLG 831

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              ++GL+L+   ++ L +  W  ++E+Q + R HR+G  +   V  L M GT+E++ +E 
Sbjct: 832  VCAVGLNLTAANQIILSDTWWAPAIEDQAVDRVHRLGQRKETRVFRLIMDGTIEQRTIEI 891


>gi|118083556|ref|XP_416595.2| PREDICTED: transcription termination factor 2 [Gallus gallus]
          Length = 1178

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 128/564 (22%), Positives = 238/564 (42%), Gaps = 70/564 (12%)

Query: 585  KTLDNLAFDLAALRLALCEPLDSVRLYLSR---------ATLIVVPSYLVDHWKTQIQQH 635
            KTL  +A  L   ++   +    + ++LSR         +TLI+ P+ L+ HWK +I + 
Sbjct: 615  KTLTMIALILTQKQMKTEKGSKKLEVWLSRNDSTVIPSCSTLIICPASLIHHWKKEIDRR 674

Query: 636  VRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKK--------------- 680
            V  G+L ++++    +     +  +YD+V+TT++ LS E    K+               
Sbjct: 675  VSFGKLRVYLYHGPNREKHAEVLSEYDIVVTTYSLLSKEVPTSKEEGEFPAKDHEVGSGS 734

Query: 681  ---SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS---LTASNRWLLTGTPTPNTPNS 734
               SP+++V W RV+LDE HT+ +      K+Q +I+   L AS RW +TGTP  N    
Sbjct: 735  SACSPLLRVAWARVILDEAHTIKNP-----KVQTSIAVCKLRASARWAVTGTPIQNN--- 786

Query: 735  QLSHLQPMLKFLHEEAYGQNQKAW----DGGILRPFEAEMEEGRSRLLQLLHRCMISARK 790
             L  +  +L+FL    + +  K W    D    +  +      RS LL+     + S  K
Sbjct: 787  -LLDMYSLLRFLRCSPFDE-YKVWKYQVDNNTKKGGDRLSLLTRSLLLRRTKDQLDSTGK 844

Query: 791  TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFR 850
              L ++P    ++  L  + E    YN L    R           S ++S L  ++ K  
Sbjct: 845  P-LVSLPQRSMQLHQLKLSAEEQSVYNVLFARSR-----------STLQSYLKRQEQKNE 892

Query: 851  STTIRNLRLSCCVAGHIKVTDAGEDIQ-ETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL 909
            S            AG        +D      + L  +         A +   LL    C 
Sbjct: 893  SREH---------AGSNPFEKVAQDFGCSQKEFLASSQSAVQVSSTAHVLSMLLRLRQCC 943

Query: 910  RHILCLDCVAMDSEKCSLPGCGFLYEMQ-SPEILTRPENPNPKWPVPQDLIELQPSYRQW 968
             H+  L  VA+D    +  G     E Q S   L+  + P+ K  V  +         + 
Sbjct: 944  CHLSLLK-VALDQANLANEGLSLSIEEQLSALTLSELQTPDSKSTVYLNGTAFNTDLFEI 1002

Query: 969  SNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSS 1028
            S  +T +   L       + +  +K ++ SQ+   + V+   L   G+K++ +   ++  
Sbjct: 1003 SKESTKVSHLLAELKTIQSCSETEKSVVVSQWTSMLKVVAVHLQRLGLKYSMLDGSVNPK 1062

Query: 1029 NKIKSLDMFRHDASCLALLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRM 1086
             ++  ++ F ++     +++    +  +GL+L+    +FL++  W+ ++E+Q   R +R+
Sbjct: 1063 QRMDVVEEFNNNPKGPQVMLVSLLAGGVGLNLTGGNHLFLLDMHWNPALEDQACDRIYRV 1122

Query: 1087 GATRPIHVETLAMRGTVEEQMLEF 1110
            G  + + +      GTVEE++L+ 
Sbjct: 1123 GQKKDVVIHRFVCEGTVEEKILQL 1146


>gi|326427538|gb|EGD73108.1| nucleotide excision repair protein [Salpingoeca sp. ATCC 50818]
          Length = 865

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 137/608 (22%), Positives = 245/608 (40%), Gaps = 120/608 (19%)

Query: 594  LAALRLALCEPLDSVRLYLSRA--------TLIVVPSYLVDHWKTQIQQHVRPGQLHLFV 645
            + A  + + + + ++ L LSR         TL++ P+  +  W+T+++   +PG L + V
Sbjct: 282  ILADEMGMGKTIQTIALLLSRPSQAEPRKPTLVIAPTVALFQWRTEVEAKSKPGSLKVLV 341

Query: 646  WTDHKKPSAHSLAWDYDVVITTFNRLSAEWGR------------RKKSPMMQVHWLRVML 693
            +    +         +DVV+TT+  + +EW R            ++KS +  + W RV+L
Sbjct: 342  YYGSGRNRDADHITSFDVVLTTYATVESEWRRQQSGFKRKGEKVKEKSTIHSIAWHRVVL 401

Query: 694  DEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYG- 752
            DE H +      T +      L+A  +W L+GTP  N    ++  +  ++KFL  + +  
Sbjct: 402  DEAHFIKDRSCSTAR--AVFGLSAKYKWSLSGTPLQN----RVGEMYSLVKFLKGDPFSF 455

Query: 753  ---------------QNQKA--------------WDGGILRPFEAEMEEGRSR-----LL 778
                            N K               W+  ILRP +     G  +     L 
Sbjct: 456  YFCRQCECKSLTWNFSNYKRCDDCGHANCSHFAWWNREILRPIQKFGPVGAGKVAFDHLR 515

Query: 779  QLLHRCMISARKTDLQT---IPLCIKEVTFLNFTEEHAGTYNELVVT--------VRRNI 827
            QLL   M+   K D  +   +P  I       FT E    Y  L           VR   
Sbjct: 516  QLLSAIMLRRTKVDRGSELGLPPRIIHTRRDLFTHEEEDFYEALFSESKTRFQSFVRAGT 575

Query: 828  LMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDA--GEDIQETMDVLVE 885
            ++   N+ +H+  LL              +R+   V     VT     +D ++   +  E
Sbjct: 576  VL---NNYAHIFELL--------------MRMRQSVNHPWLVTHRVDSKDDKDVCGICHE 618

Query: 886  NGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAM--DSEKCSLPGCGFLYEMQSPEILT 943
               DP           +++G    +H  C + V +   S    +P C   ++  S + LT
Sbjct: 619  FAEDP-----------IMSG---CKHTFCREEVELYISSSCAEVPVCPVCFQPLSID-LT 663

Query: 944  RP--ENPNPKWPVPQDLIELQPSYRQWSNTNTF--LKQDLYRPNLESNKALPDKVIIFSQ 999
            +P  E P          I  +    +W ++     L ++L    L+S+      + IFSQ
Sbjct: 664  QPTIERPKIAEKSKSKSIVRRLDMERWQSSTKIEALLEELT--ALQSDTHCIKSI-IFSQ 720

Query: 1000 FLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDL 1058
            F + + ++E +L   GI+   +   M  +++   +D F         L+   A  L L+L
Sbjct: 721  FTQFLDLLEWRLQRGGIRCVKLDGRMSPASRAAVIDAFNTKPEITVFLISLKAGGLALNL 780

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCR 1118
            +  +RV++ +P W+   E Q + R HR+G  RP+ V  L +  ++E + ++ LQ+    +
Sbjct: 781  TAASRVYITDPWWNPCAEAQAMDRIHRLGQNRPVEVRRLIIENSIESR-IDQLQEK---K 836

Query: 1119 RLLKEELV 1126
            RLL E  V
Sbjct: 837  RLLFESTV 844


>gi|302819025|ref|XP_002991184.1| hypothetical protein SELMODRAFT_429540 [Selaginella moellendorffii]
 gi|300141012|gb|EFJ07728.1| hypothetical protein SELMODRAFT_429540 [Selaginella moellendorffii]
          Length = 1524

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 123/551 (22%), Positives = 220/551 (39%), Gaps = 111/551 (20%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPG---QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
             TL+V P+ ++  W  +I++ V        H++   + K+   + LA  YDVV+TT++ +
Sbjct: 610  GTLVVCPTSVLRQWYHEIEEKVTAAARLSTHIYHGGNRKR-CPYELA-KYDVVLTTYSIV 667

Query: 672  S-----------------AEWGR-----------------RKKSPMMQVHWLRVMLDEGH 697
            +                 A++G                  R   P+ +V W RV+LDE  
Sbjct: 668  TNEVPKPDEEIEADEETYADYGSSCSQAFSNKKTKKRTPTRGAGPLAEVKWFRVVLDEAQ 727

Query: 698  TLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKA 757
            T+ ++  L         L A  RW L+GTP  NT +   S+ +  L+F   ++Y      
Sbjct: 728  TIKNAKTLA--AYACWGLKADRRWCLSGTPLQNTIDDLFSYFR-FLRFDPLDSY----ST 780

Query: 758  WDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFL--NFTEEHAGT 815
            +   +  P   +   G ++L  +L                L  K VT L  +F++E    
Sbjct: 781  FKIKVKEPISRDPSTGYAKLQMILQ---------------LPEKHVTMLQADFSKEEREF 825

Query: 816  YNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHI------KV 869
            Y+ L    R           S+       K +      +  LR +CC    +      K+
Sbjct: 826  YDSLEQRSRDKFQ-------SYQRRGTVQKNYANIMVLLLRLRQACCHRSLVPEDKESKI 878

Query: 870  TDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVA---MDSE--- 923
             D   +I    +V +    +  + E  F+        +C  H+ C  C++   + SE   
Sbjct: 879  EDEESNIDAKENVSICTICED-APEQPFL--------SCCGHVFCSQCISEKLLTSEELA 929

Query: 924  -KCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQ----D 978
             KC  PGC    E                       ++    Y   S  N  +++     
Sbjct: 930  VKCPAPGCSCTLESSLLSSFM--------------SLDSNGGYESSSKINAVMERLMNLP 975

Query: 979  LYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR 1038
            +  P     KA+ +K ++FSQ+   + ++E +L  AG++F  +   M    +  ++  F 
Sbjct: 976  VTSPAAAGKKAVTEKALVFSQWTSLLDLVEPRLEKAGLEFRRLDGTMSVMERDAAVCEFN 1035

Query: 1039 HDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
                   +LM     SLGL++     V L++  W+ ++E+Q I RAHR+G TR +HV   
Sbjct: 1036 EKPEVSVMLMGLKVGSLGLNMVAACHVLLLDVWWNPTVEDQAIDRAHRIGQTRDVHVTRF 1095

Query: 1098 AMRGTVEEQML 1108
             ++ T+E+++L
Sbjct: 1096 TVKKTIEDRIL 1106


>gi|403213763|emb|CCK68265.1| hypothetical protein KNAG_0A06030 [Kazachstania naganishii CBS 8797]
          Length = 1150

 Score =  104 bits (259), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 134/572 (23%), Positives = 236/572 (41%), Gaps = 91/572 (15%)

Query: 611  YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD----VVIT 666
            Y S+ TLIVVP  L+  W  +             V+      S  +L         VV+T
Sbjct: 563  YASKTTLIVVPMSLLTQWNMEFNAVNNCSDKRCEVYYGGNVSSLKTLLTMTKNPPAVVLT 622

Query: 667  TFNRLSAEWGR-----------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISL 715
            T+  +  EW +            + + +  V + RV++DEGHT+ +   +T+K  M   L
Sbjct: 623  TYGIVQNEWNKLLRDNKMRSKISESTGLFAVDFYRVIIDEGHTIRNRGTVTSKAIM--DL 680

Query: 716  TASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS 775
             +  RW+LTGTP  N    +L  L  ++KFL  E + Q    W   I  PFE +  +   
Sbjct: 681  RSRCRWVLTGTPIIN----RLDDLYSLVKFLDLEPWSQ-VGYWKTFISEPFENKNFKQAF 735

Query: 776  RLLQLLHRCMISARKTDLQTI---PLCI---KEVTF--LNFTEEHAGTYNELVVTVRRNI 827
             ++  + + ++  R  D++     PL +   KE+T   L      A  Y  L+     ++
Sbjct: 736  DVVNAIMQPVVLRRTKDMKGADGKPLVVLPPKEITIEKLKLNNSQAAVYKYLLNKAEDSV 795

Query: 828  LMADWNDPSHVESLLNPKQWKFRSTT---IRNLRLSCCVAGHIKVTDAGED--------I 876
             +           L      K  ST    I  LR  CC    +   D  ++         
Sbjct: 796  KLG----------LARGDLLKKYSTILVHILRLRQICCDIELLGSQDENDEDLAEINRGF 845

Query: 877  QETMDVL-----VENGLDPLSQEYAFIKYNLLN------GGNCLRHILCLDCVA--MDSE 923
            QE  D+      V+   +   +    I+ +++N        N L ++ C  C    +D  
Sbjct: 846  QENADIKAILNDVKQKKNSSKKSKEQIEESIINLHEKYPDNNSLTNLECSICTTEPIDPH 905

Query: 924  KCSLPGCGFLY-EMQSPEILT--RPENPNPKWPVPQDLIE-------LQPSYRQWSNTNT 973
            K  L  CG  + +    E +T  + +  + K P+ +++++       L+    Q  +   
Sbjct: 906  KLILTDCGHPFCDKCILEYITYQKEKKLDVKCPICREMLDDTSGMFCLKGEVEQGEDFEL 965

Query: 974  FLKQDLYRP-NLES---------NKALPDKVIIFSQFLEHIHVIEQQLTVAG-------I 1016
             L  +  +P  +E+         + +  ++VI+FSQF  ++ ++E+ L+ A         
Sbjct: 966  TLFDNTKKPAKIEALVKGLQQLQDSSSGEQVIVFSQFSSYLDILERDLSNAFSAESSKIY 1025

Query: 1017 KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSME 1076
            KF G  S    S  +    +       + LL   +  +GL+L+  +R ++M+P W  SME
Sbjct: 1026 KFDGRLSLKERSAVLADFQLKDFSKQKILLLSLKAGGVGLNLTCASRAYMMDPWWSPSME 1085

Query: 1077 EQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            +Q I R HR+G T  + V    +  ++EE+ML
Sbjct: 1086 DQAIDRLHRIGQTNSVKVVRFIIENSIEEKML 1117



 Score = 46.2 bits (108), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 41/120 (34%)

Query: 163 MKLKLFPHQQAAVEWMLHRE----------------------------------WNAEVL 188
           +K++L  +Q+  + WML RE                                  W A+ L
Sbjct: 414 LKVQLRAYQKQGLTWMLRREHEFDKANSNGSADEVIGDMMNPLWKKFSWPKDMSWEAQKL 473

Query: 189 RHPLYIDLATEDGF-YFYVNTVSGDIATGTAPTMRDF-HGGMFCDEPGLGKTITALSLIL 246
                  L T   F YFY N  +G+ +T   P +R    GG+  DE GLGKTI+ALSL+L
Sbjct: 474 GQ----GLDTIPNFEYFYANLHTGEFST-KKPVLRSIIKGGILSDEMGLGKTISALSLVL 528


>gi|207343185|gb|EDZ70726.1| YLR032Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 1126

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 158/636 (24%), Positives = 259/636 (40%), Gaps = 113/636 (17%)

Query: 544  GLASPILGSYAAG----ETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRL 599
             LA PIL +   G    +  G  K   A+ L+      ++  +    +D   FD+    +
Sbjct: 516  SLAKPILKTMIKGGILSDEMGLGKTVAAYSLV------LSCPHDSDVVDKKLFDIENTAV 569

Query: 600  ALCEP---LDSVRLYLSRATLIVVPSYLVDHWKTQIQQ-HVRPGQLHLFVW---TDHKKP 652
            +   P    D+ + Y S+ TLIVVP  L+  W  +  + +  P   H   +       K 
Sbjct: 570  SDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKT 629

Query: 653  SAHSLAWDYDVVITTFNRLSAEWGRRKK-----------SPMMQVHWLRVMLDEGHTLGS 701
                      VV+TT+  +  EW +  K           S +  V++ R+++DEGH + +
Sbjct: 630  LLTKTKTPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRN 689

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
               +T+K  MA  L    +W+LTGTP  N    +L  L  ++KFL  + + Q    W   
Sbjct: 690  RTTVTSKAVMA--LQGKCKWVLTGTPIIN----RLDDLYSLVKFLELDPWRQ-INYWKTF 742

Query: 762  ILRPFEAEMEEGRSRLLQ------LLHRCMISARKTDLQTIPLCIKEVTF--LNFTEEHA 813
            +  PFE++  +    ++       LL R      K     + L  KEV    L F++   
Sbjct: 743  VSTPFESKNYKQAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQD 802

Query: 814  GTYNELV----VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKV 869
              Y  L+    V+V+  I   D         LL  K++      I  LR  CC  G I  
Sbjct: 803  LLYKFLLDKAEVSVKSGIARGD---------LL--KKYSTILVHILRLRQVCCHPGLIGS 851

Query: 870  TDAG-EDIQETMDVLVENG--LDPLSQ------EYAFIKYNL----------LNGGNCLR 910
             D   ED+ +   ++ E    LD L +      + +F K  L                 +
Sbjct: 852  QDENDEDLSKNNKLVTEQTVELDSLMRVVSERFDNSFSKEELDAMIQRLKVKYPDNKSFQ 911

Query: 911  HILCLDCVA--MDSEKCSLPGCG--------FLY-EMQSPEILTRPENPNPKWPVPQDLI 959
             + C  C    MD +K     CG        F Y E Q+ + L   + PN +  +  D  
Sbjct: 912  SLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSKNLGL-KCPNCRNQI--DAC 968

Query: 960  ELQPSYRQWSNTNTFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIH 1005
             L    +  SN+   L+   Y P  +S+K              +  ++V+IFSQF  ++ 
Sbjct: 969  RLLALVQTNSNSKN-LEFKPYSPASKSSKITALLKELQLLQDSSAGEQVVIFSQFSTYLD 1027

Query: 1006 VIEQQLT------VAGI-KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDL 1058
            ++E++LT      VA I KF G  S    ++ +    +  +    + LL   +  +GL+L
Sbjct: 1028 ILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNL 1087

Query: 1059 SFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
            +  +  ++M+P W  SME+Q I R HR+G T  + V
Sbjct: 1088 TCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKV 1123



 Score = 48.5 bits (114), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 37/119 (31%)

Query: 162 CMKLKLFPHQQAAVEWMLHRE----------------------------------WNAEV 187
             KL+L  +Q+  + WML RE                                  W A+ 
Sbjct: 433 VFKLELRNYQKQGLTWMLRREQEFAKAASDGEASETGANMINPLWKQFKWPNDMSWAAQN 492

Query: 188 LRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           L+      +  EDG +FY N  SG+ +           GG+  DE GLGKT+ A SL+L
Sbjct: 493 LQQD---HVNVEDGIFFYANLHSGEFSLAKPILKTMIKGGILSDEMGLGKTVAAYSLVL 548


>gi|40882196|emb|CAF06022.1| related to regulator of chromatin [Neurospora crassa]
          Length = 451

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 114/475 (24%), Positives = 202/475 (42%), Gaps = 63/475 (13%)

Query: 639  GQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHT 698
            G LH+ ++   +KP  +    D D+V+TT++ L++++  ++   + ++ W RV+LDEG T
Sbjct: 3    GALHVTIFHGEQKPRGYETLMDTDLVLTTYSTLASDY--KRSGLLHRMEWYRVVLDEGST 60

Query: 699  LGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAW 758
              +S   T+  + A +L  + RW LTGTP  N    +L  L  +  FL    Y   + A+
Sbjct: 61   RNAS---THYFRAAATLNTTRRWCLTGTPIQN----KLEDLSSLADFLRLPPY-LAKNAF 112

Query: 759  DGGILRPFEAEMEEGR--SRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTY 816
               +L P       GR  S  L+   R     R      +P    ++ +L  +++   TY
Sbjct: 113  RKHVLEPLSG---GGRCNSEPLRAYLRSYCLRRTDKCLDVPPSTSKIIYLALSDQEQWTY 169

Query: 817  NELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDI 876
            + ++   R   L+ D        +L   K +    T I  +R+  C  G +    A  D 
Sbjct: 170  DAIL--SRTKWLLDDIVSGKDTGTL---KLYNVLFTAILKMRM-MCNHGTLNPLWASADY 223

Query: 877  QETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEM 936
                   V+   +  S     + +  +          C +C      +   PG  F+   
Sbjct: 224  LTPQHGEVDTSCERCSSLENDVDFGDIQ--------FCPNC-----RRPLQPGSHFVNAG 270

Query: 937  QSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVII 996
            +SP+              P  L  L  +     + N+ L+ DL+   L++         +
Sbjct: 271  ESPD--------------PTGL--LGDAIADTIDINSSLQTDLFSTKLKA---------V 305

Query: 997  FSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLG 1055
              Q LE     +Q   VA +   G  S    S + + +  F+ D     L+M  G+ ++G
Sbjct: 306  RKQVLEAGTGTKQDAGVAALLVHGKTS---ISERTRLIRTFQGDPQAFILIMSVGTGAVG 362

Query: 1056 LDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            L+L+  + V ++EP W+ S+E Q I+RA RMG T+ + V    M+ TVE+ ++  
Sbjct: 363  LNLTAASHVHVVEPHWNPSVEAQAIARAVRMGQTKNVLVTRYIMKRTVEDNIVAL 417


>gi|388580277|gb|EIM20593.1| hypothetical protein WALSEDRAFT_20372 [Wallemia sebi CBS 633.66]
          Length = 653

 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 132/582 (22%), Positives = 237/582 (40%), Gaps = 96/582 (16%)

Query: 594  LAALRLALCEPLDSVRLYLS---RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK 650
            + A  + + + + ++ L LS      LIV P+  V  WK +I+       + + +W    
Sbjct: 70   MLADEMGMGKTIQTIALLLSDRKAPNLIVAPTIAVVQWKNEIEAFT--DGMKVLLWHGAS 127

Query: 651  KPSAHSLAWDYDVVITTFNRLSAE-----WGRRKK-------SPMMQVHWLRVMLDEGHT 698
            +         YDVV+T++  + +      +GR+KK       SP+  + W R++LDE H+
Sbjct: 128  RTKHKDDLKKYDVVLTSYAVMESAFRIQTYGRQKKGQKIKEPSPIHSLKWHRIILDEAHS 187

Query: 699  LGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEA----YGQN 754
            +      TN  +   +L ++ +W L+GTP  N    ++  L  +++F+  +     YG+ 
Sbjct: 188  IKE--RQTNTAKATFALESNFKWCLSGTPLQN----RVGELYSLVRFIGADPFAYYYGKK 241

Query: 755  QKA--------------------------WDGGILRPFE--AEMEEGRS---RLLQLLHR 783
             K                           W+  IL P +    + EG++   +L  LL R
Sbjct: 242  SKCKSLNWSFSDRRHCDFCGESPMNHVCFWNNEILTPIQRYGMVGEGKTAFKKLKILLDR 301

Query: 784  CMIS----ARKTDLQTIPLCIK-EVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHV 838
             M+      R  DL   P  +K    F  F+EE    Y  L   VRR      + D   V
Sbjct: 302  MMLRRTKVERADDLGLPPRIVKCRKDF--FSEEERDLYLSLYTDVRRTF--TTYIDQGTV 357

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFI 898
               LN     F  + I  +R   C    +  +  G   QE  D  V    + ++++    
Sbjct: 358  ---LNNYSSIF--SLITRMRQMACHPDLVLKSRTGPYGQEAPDEHVCRICNDIAEDAI-- 410

Query: 899  KYNLLNGGNCLRHILCLDCVA--MDSEKCSLPGCGFLY-----EMQSPEILTRPENPNPK 951
                     C  H+ C  C+   +     S P C   +     ++  P I T  E+   K
Sbjct: 411  ------DARC-HHVFCRLCITEYLTGSLVSQPECPSCHLPISIDINQPSIET-AEDEGLK 462

Query: 952  WPVPQDLIELQPSYRQWSNTNTF--LKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQ 1009
               PQ +I  +    +W ++     L ++L     E       K ++FSQF+  + ++  
Sbjct: 463  TSKPQGIIG-RLDMDKWKSSTKIEALVEELTELQREDCTV---KSLVFSQFVNFLDLVAW 518

Query: 1010 QLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLME 1068
            +L  AG     +   M    +   +  F  +  C   L+   A  + L+L+  +RV++M+
Sbjct: 519  RLKKAGFNICRLEGNMTPQARNAVVQHFMKNVHCTVFLVSLKAGGVALNLTEASRVYMMD 578

Query: 1069 PIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              W+ S+E Q + R HR+GA RP+    L +  ++E ++++ 
Sbjct: 579  SWWNPSVEYQAMDRVHRLGARRPVECIKLVVEDSIESRIVQL 620


>gi|254573876|ref|XP_002494047.1| Protein that recognizes and binds damaged DNA in an ATP-dependent
            manner (with Rad7p) [Komagataella pastoris GS115]
 gi|238033846|emb|CAY71868.1| Protein that recognizes and binds damaged DNA in an ATP-dependent
            manner (with Rad7p) [Komagataella pastoris GS115]
          Length = 728

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 132/530 (24%), Positives = 215/530 (40%), Gaps = 82/530 (15%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            S  TL+V P  +   W  +IQ      + ++F  +D  K + +     +DVV+TT+N + 
Sbjct: 217  SPVTLVVCPLAVASQWCKEIQTKAPSLKTYIFHGSD--KATEYKELLKFDVVVTTYNVVL 274

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             +  ++ K+ +   +W R++LDE HT+ +  ++T K    I L +S +W LTGTP  N  
Sbjct: 275  WDLKKKSKAILTAGNWWRIILDEAHTIKNFNSMTAK--SCIELKSSQKWCLTGTPIQNN- 331

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF-EAEMEEGRSRLLQLLHRCMISARKT 791
               L  ++  L FL    Y    K W   I +       +E    L Q      +   K 
Sbjct: 332  ---LEEIRAYLLFLKMGKYADPNK-WSQDIAKSIHRGHADEALDLLKQDFAPFFLRRSKA 387

Query: 792  DLQ------TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPK 845
             LQ       +P  I     + F  +    Y+ +   +R  +L  + N+     SL    
Sbjct: 388  ILQQSASGFKLPPKIIHSELVEFDPKEKILYSMMERRMRSVLLPEEDNELESQVSL---- 443

Query: 846  QWKFRSTTIRN----------LRLSCCVAGHIKVTDAGE-------DIQETMDVLVENGL 888
              K   ++I            LR  CC    I      E       +  E  D  VEN +
Sbjct: 444  --KVDVSSISGYLGALVCLLRLRQICCHWNLIYEFKEEELESEYTPNALENSDKKVENSV 501

Query: 889  DPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEK-CSLPGCGFLYEMQSPEILTRPEN 947
            + L+     +K   +    CL   +C   +  D  K CS   C  L E Q+P        
Sbjct: 502  EDLND---MMKELEVTEKKCL---ICRSQLWSDDVKYCS--QCKSLSEQQTP-------- 545

Query: 948  PNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVI 1007
            P  +    + L+E+             LK+D  R           K IIFSQF + +  +
Sbjct: 546  PLERSAKSERLLEI-------------LKRDPAR-----------KTIIFSQFTKLLATL 581

Query: 1008 EQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFL 1066
            +  LT  G K       M  + +  +L  F  +     LL      ++GL+L+   RV +
Sbjct: 582  KPFLTKNGFKCVLYEGTMTRAMRDTTLKEFNENPETTVLLCSLKCGAIGLNLTIANRVVI 641

Query: 1067 MEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
             +P W+  +E+Q I R +R G T+ + V  L ++ +VEE ++  LQ+  R
Sbjct: 642  YDPWWNPQVEDQAIDRVYRFGQTKEVDVYRLIIKDSVEENIVR-LQEKKR 690


>gi|328354133|emb|CCA40530.1| hypothetical protein PP7435_Chr4-0362 [Komagataella pastoris CBS
            7435]
          Length = 689

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 211/524 (40%), Gaps = 81/524 (15%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            S  TL+V P  +   W  +IQ      + ++F  +D  K + +     +DVV+TT+N + 
Sbjct: 217  SPVTLVVCPLAVASQWCKEIQTKAPSLKTYIFHGSD--KATEYKELLKFDVVVTTYNVVL 274

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
             +  ++ K+ +   +W R++LDE HT+ +  ++T K    I L +S +W LTGTP  N  
Sbjct: 275  WDLKKKSKAILTAGNWWRIILDEAHTIKNFNSMTAK--SCIELKSSQKWCLTGTPIQNN- 331

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF-EAEMEEGRSRLLQLLHRCMISARKT 791
               L  ++  L FL    Y    K W   I +       +E    L Q      +   K 
Sbjct: 332  ---LEEIRAYLLFLKMGKYADPNK-WSQDIAKSIHRGHADEALDLLKQDFAPFFLRRSKA 387

Query: 792  DLQ------TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPK 845
             LQ       +P  I     + F  +    Y+ +   +R  +L  + N+     SL    
Sbjct: 388  ILQQSASGFKLPPKIIHSELVEFDPKEKILYSMMERRMRSVLLPEEDNELESQVSL---- 443

Query: 846  QWKFRSTTIRN----------LRLSCCVAGHIKVTDAGE-------DIQETMDVLVENGL 888
              K   ++I            LR  CC    I      E       +  E  D  VEN +
Sbjct: 444  --KVDVSSISGYLGALVCLLRLRQICCHWNLIYEFKEEELESEYTPNALENSDKKVENSV 501

Query: 889  DPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEK-CSLPGCGFLYEMQSPEILTRPEN 947
            + L+     +K   +    CL   +C   +  D  K CS   C  L E Q+P        
Sbjct: 502  EDLND---MMKELEVTEKKCL---ICRSQLWSDDVKYCS--QCKSLSEQQTP-------- 545

Query: 948  PNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVI 1007
            P  +    + L+E+             LK+D  R           K IIFSQF + +  +
Sbjct: 546  PLERSAKSERLLEI-------------LKRDPAR-----------KTIIFSQFTKLLATL 581

Query: 1008 EQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFL 1066
            +  LT  G K       M  + +  +L  F  +     LL      ++GL+L+   RV +
Sbjct: 582  KPFLTKNGFKCVLYEGTMTRAMRDTTLKEFNENPETTVLLCSLKCGAIGLNLTIANRVVI 641

Query: 1067 MEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             +P W+  +E+Q I R +R G T+ + V  L ++ +VEE +  F
Sbjct: 642  YDPWWNPQVEDQAIDRVYRFGQTKEVDVYRLIIKDSVEENINYF 685


>gi|429849314|gb|ELA24717.1| transcription termination factor 2 [Colletotrichum gloeosporioides
           Nara gc5]
          Length = 1035

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 110/219 (50%), Gaps = 14/219 (6%)

Query: 604 PLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDV 663
           PL SV    +RATL+V P   V +W+ QI+QH+ PG+L  +++    +        DYD+
Sbjct: 441 PLTSVTTN-TRATLLVCPLSTVTNWEEQIKQHIAPGELSYYIYHGSNRTREADKLADYDL 499

Query: 664 VITTFNRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
           VITT+  +S+E G R K      P+ ++ W R++LDE H +     L  + +  + L A+
Sbjct: 500 VITTYGSVSSELGARSKRKGGKYPLEEIGWFRIVLDEAHMIREVATL--QFKAIVRLQAA 557

Query: 719 NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL 778
            RW +TGTP  N    +L  L  +L+F+    +    K ++  I+ PF+A   E   +L 
Sbjct: 558 RRWAVTGTPVQN----RLEDLAALLQFIRLRPFDDRNK-FNRFIVDPFKACDTEIVPKLR 612

Query: 779 QLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYN 817
            L+    +  R  D   +P     +  L+FT E    Y+
Sbjct: 613 VLVDSVTLR-RLKDKINLPPRSDHIVKLDFTAEEREIYD 650



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 1/131 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG 1050
            P K ++FS +  H+ +I+  L    IK+  +   M    + +++D FR D S   +L+  
Sbjct: 878  PYKSVVFSTWTSHLDLIQLALDKLEIKYVRLDGSMSRVARTQAMDTFREDDSVHVILVSI 937

Query: 1051 SAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            +A  LGL+L+    V++MEP ++ + E Q I R HR+G  RP+      MR + EE+MLE
Sbjct: 938  TAGGLGLNLTAGNNVYVMEPQYNPAAEAQAIDRVHRLGQKRPVRTVRYIMRNSFEEKMLE 997

Query: 1110 FLQDTDRCRRL 1120
              +  ++   L
Sbjct: 998  LQEKKNKLASL 1008


>gi|451851748|gb|EMD65046.1| hypothetical protein COCSADRAFT_181009 [Cochliobolus sativus ND90Pr]
          Length = 1141

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 131/572 (22%), Positives = 234/572 (40%), Gaps = 93/572 (16%)

Query: 616  TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS-------AHSLAWDYDVVITTF 668
            TL++ P  L+  W ++ ++  + G L   V+   +K         A + A   +V+IT++
Sbjct: 550  TLVIAPMSLLAQWHSEAEKASKEGTLKAMVYYGSEKAVNLQKLCCASNAANAPNVIITSY 609

Query: 669  NRLSAEWG--------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
              + +E+         R     +  + + RV+LDE H + +  + T K      L+A +R
Sbjct: 610  GTVLSEYNQVLTQDGNRGSHGGIFSLEYFRVILDEAHYIKNRQSKTAK--ACYELSAKHR 667

Query: 721  WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
            W+LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE+        ++Q 
Sbjct: 668  WVLTGTPIVN----RLEDLFSLVRFLKVEPWA-NFSFWKTFITVPFESGDFVRALNVVQT 722

Query: 781  LHRCMISARKTDLQT------IPLCIK--EVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
            +   ++  R  D++T      +PL  +  EV  +  +++    Y+ + +  + ++  A+ 
Sbjct: 723  VLEPLVLRRTKDMKTPDGKALVPLPPRTIEVEKIVLSQDERDVYDHIYMRAK-SVFSAN- 780

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCC----------VAGHIKVT---DAGEDIQET 879
               +   +L+  K +      I  LR SCC          VA     +   D    + + 
Sbjct: 781  ---AEAGTLM--KSYTTIFAQILRLRQSCCHPVLTRKANIVADEEDASLASDLANGLADD 835

Query: 880  MDV--LVENGLDPLSQEYAFIKYNLL------NGGNCLR---------------HILCLD 916
            MD+  L+E       Q+ +    N+L      N   C                 H  C +
Sbjct: 836  MDLSNLIERFETEGDQDVSRFGANVLKQIQDENEAECPICCEEPMNEQAVTGCWHSACKE 895

Query: 917  C----VAMDSEKCSLPGC---------GFLYEMQSPEILTRPENPNPKW-----PVPQDL 958
            C    +A   +K  +P C           ++E+   + +     PN  +     P P   
Sbjct: 896  CLLNYIAHQRDKNEIPRCFNCREPINARDVFEVIRHDHIAEDNEPNHAFRPSDAPQPTST 955

Query: 959  IELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQFLEHIHVIEQQLTVAGIK 1017
               + S R+   T +   Q L      + K   + K ++FSQF   + +IE  L    I 
Sbjct: 956  QTPRISLRRVGLTGSAKTQALIGHLKRTRKEEKNTKTVVFSQFTSFLDLIEPALARDHIP 1015

Query: 1018 FAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSME 1076
            F      +    + + L  F        LL+   A  +GL+L+  ++VF+M+P W  ++E
Sbjct: 1016 FLRFDGSITQKARAQILAEFTTSPKPYVLLLSLRAGGVGLNLTCASKVFMMDPWWSFAVE 1075

Query: 1077 EQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             Q I R HRMG  R + V    + G++EE+ML
Sbjct: 1076 AQAIDRVHRMGQEREVKVIRFCVEGSIEEKML 1107



 Score = 48.5 bits (114), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 18/101 (17%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNA-----EVLRHPLYIDL-------------ATEDGFYF 204
            +L L  +Q+ A+ WM+ +E +      E   HPL+ +              A  D   F
Sbjct: 414 FRLDLRKYQKQALFWMVSKERDESIEDRETSMHPLWEEYQWPTQDADNQPVPAVTDQAMF 473

Query: 205 YVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           YVN  SG+++       ++  GG+  DE GLGKTI  LSLI
Sbjct: 474 YVNPYSGELSLEFPKQEQNCLGGVLADEMGLGKTIEMLSLI 514


>gi|348687949|gb|EGZ27763.1| hypothetical protein PHYSODRAFT_321500 [Phytophthora sojae]
          Length = 539

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/118 (48%), Positives = 74/118 (62%), Gaps = 6/118 (5%)

Query: 993  KVIIFSQFLEHIHVIE---QQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            KVIIFSQF E I  ++   QQ  +    F  +  P     ++++L  FR + +   LL+ 
Sbjct: 20   KVIIFSQFTEMIWRVKLAFQQQKIPTADFITLIKPKL---RMRALRRFRENPAVNVLLLS 76

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
               S GLDLSFVT VFLME IWD+S+E QVISRAHRMGA + + +E L MRG+VE  M
Sbjct: 77   EEGSHGLDLSFVTHVFLMEEIWDKSLETQVISRAHRMGAEQAVVIERLWMRGSVESDM 134


>gi|358389703|gb|EHK27295.1| hypothetical protein TRIVIDRAFT_188178 [Trichoderma virens Gv29-8]
          Length = 871

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 126/551 (22%), Positives = 220/551 (39%), Gaps = 102/551 (18%)

Query: 605  LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDY--- 661
            +D+  +  S  TLI+VP  L+  W+ Q+ +HV PG L    W  H   +  + A  Y   
Sbjct: 387  MDADDVVTSATTLIIVPPPLLGTWEEQLLEHVTPGSL---TWCRHHGKTKLTEAMSYKDT 443

Query: 662  DVVITTFNRLSAEW---GRRKKSPMMQVHWLRVMLDEGHTL-GSSLNLTNKLQMAISLTA 717
             +V+TT++ +SAEW   G    S +    W RV+LDE H +  SS  LT   +   +L A
Sbjct: 444  SIVLTTYHTVSAEWKSHGEHSPSILFSTRWRRVILDEAHFIRNSSSQLT---RATCALDA 500

Query: 718  SNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF-EAEMEEGRSR 776
            + RW +TGTP  N     LS L  +  FL    Y  ++K +D  I   + E + +E   R
Sbjct: 501  AARWAVTGTPIQNG----LSDLTTLFSFLRVYPYS-DRKQFDADITNLWKEGDTDEALKR 555

Query: 777  LLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNEL--VVTVRRNILMADWND 834
             L+ L  C+I  R  +   +PL       + FT      Y E+      R + L+ + +D
Sbjct: 556  -LKRLAACLILRRTQNTIQLPLRSDLQCAVEFTGAERAIYEEIRNKTIARIDHLLYESSD 614

Query: 835  PSHVESLLNPKQWKFRSTTIRNLRLSCCVAGH-IKVTDAGEDIQETMDVLVENGLDPLSQ 893
             +     +N  Q       I  +R+ C +  H     D G  +Q+              +
Sbjct: 615  DARPFEYVNVLQ------QIEAMRMVCNLGLHYYNRRDLGASMQKA------------PE 656

Query: 894  EYAFIKYNLLNGGNCLRHILCLDCVAM-DSEKCSLPGCGFLYEMQSPE----------IL 942
             +A +     N    +  + C  C A+ D+    L G      +Q  +          ++
Sbjct: 657  SWATVAQQTFNLQGEMGGMRCRYCSAVADASASLLNGIQSQQPLQLSKCLQLICSDCIVM 716

Query: 943  TRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLE 1002
            TRP +     P P + + L P+  + ++++ +  +D    +L      P KV      L+
Sbjct: 717  TRPIDCGHNPPCPFEKVYLNPNSMEETSSSLYHLEDATS-SLPQTPKFPPKVTALVAQLK 775

Query: 1003 HIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVT 1062
             +    ++LT+    +A                                           
Sbjct: 776  ALPPGVKRLTLTVASYA------------------------------------------- 792

Query: 1063 RVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLK 1122
              FLMEP W+ ++E+Q ++R +R+G    +      +R + E++++    D  + +R   
Sbjct: 793  --FLMEPHWNPTLEDQALARIYRLGQRNEVTTIRFYVRDSFEQRVM----DVQQSKRQFA 846

Query: 1123 EELVKPEREGA 1133
              L+ P+   A
Sbjct: 847  AVLLTPQDSTA 857


>gi|116197985|ref|XP_001224804.1| hypothetical protein CHGG_07148 [Chaetomium globosum CBS 148.51]
 gi|88178427|gb|EAQ85895.1| hypothetical protein CHGG_07148 [Chaetomium globosum CBS 148.51]
          Length = 969

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 145/607 (23%), Positives = 254/607 (41%), Gaps = 107/607 (17%)

Query: 576  KGITRWYYPKTLDNLAFDLAALR-----------LALCEPLDSVRLYLS-----RATLIV 619
            + I+R   P  L+ LA+ +A  +           + L + + +V L +S     + +L++
Sbjct: 360  ESISRQLKPFQLEGLAWMMAMEKTEWKGGLLGDEMGLGKTIQAVSLIMSDFPAKKPSLVL 419

Query: 620  VPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTFNRLSA--- 673
            VP   +  W T+I+ +   G L   V+      S +    D   YDVVI ++N L +   
Sbjct: 420  VPPVALMQWMTEIESYT-DGTLKTLVFHGTNAKSKNLTVKDVKKYDVVIMSYNSLESMYR 478

Query: 674  --EWGRRKKSPMM-------QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLT 724
              E G ++K+ M        Q  + RV+LDE H + +   +T K   A+ +T   RW L+
Sbjct: 479  KQEKGFKRKAGMFKEKSIIHQTDFHRVILDEAHCIKTRTTMTAKACFALKVTY--RWCLS 536

Query: 725  GTPTPNTPNSQLSHLQPMLKFLHEEAYG------------------------------QN 754
            GTP  N    ++     +++FL+   +                               Q+
Sbjct: 537  GTPLQN----RIGEFFSLIRFLNVRPFACYLCKSCPCSTLEWQMDDDRKCTACGHGGMQH 592

Query: 755  QKAWDGGILRPFE-----AEMEEGRSRLLQLLHRCMISARKTD-LQTIPLCIKEVTFLN- 807
               ++  +L P +     A   E   +L  L  R M+   K D   ++ L +KE+     
Sbjct: 593  VSVFNQELLNPIQKFGNRAGGAEAFRKLRILTDRIMLRRLKIDHTDSMELPVKEINVERQ 652

Query: 808  -FTEEHAGTYNELVVTVRRNILMADWNDPSHVES--LLNPKQWKFRSTTIRNLRLSCCVA 864
             F EE     N ++ + +R          ++V S  LLN     F    I  +R    VA
Sbjct: 653  FFGEEENDFANSIMTSGQRKF-------DTYVASGVLLNNYANIF--GLIMQMRQ---VA 700

Query: 865  GHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEK 924
             H  +    +D +   +VLV N  D  +++             C +H  C  CV      
Sbjct: 701  DHPDLI-LKKDSEGGQNVLVCNICDEPAEDAI--------RSQC-KHDFCRTCVKSYVNS 750

Query: 925  CSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNT--FLKQDLYRP 982
             + P C   +   S + L +PE    +  V +  I  +     W++++    L  +L++ 
Sbjct: 751  TTSPNCPQCHIPLSID-LEQPEMEQDEAQVKKSSIINRIKMENWTSSSKIELLVHELHK- 808

Query: 983  NLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS 1042
             L S+ A   K IIFSQF   + +IE +L  AGI    +   M  + +  S+  F  + +
Sbjct: 809  -LRSDNA-SHKSIIFSQFTTMLQLIEWRLHRAGITTVMLDGSMTPAQRQASIQHFMTNVN 866

Query: 1043 CLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRG 1101
                L+   +  + L+L+  +RVF+++P W+ + E Q   R HR+G TRP  +  L +  
Sbjct: 867  VEVFLVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQTRPCTITRLCIED 926

Query: 1102 TVEEQML 1108
            +VE +M+
Sbjct: 927  SVESRMV 933


>gi|302819164|ref|XP_002991253.1| hypothetical protein SELMODRAFT_429604 [Selaginella moellendorffii]
 gi|300140964|gb|EFJ07681.1| hypothetical protein SELMODRAFT_429604 [Selaginella moellendorffii]
          Length = 959

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 135/614 (21%), Positives = 239/614 (38%), Gaps = 135/614 (21%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVW-TDHKKPSAHSLAWDYDVVITTFNRLS 672
             TL++ P+ ++  W  +I+  V P   L + V+    +  SA  LA  YDVV+TT+  +S
Sbjct: 389  GTLVICPTSVLRQWAHEIKAKVTPAANLSILVYHGSSRTRSADDLA-KYDVVLTTYPIVS 447

Query: 673  AEWGRR-----------------------------------------KKSPMMQVHWLRV 691
             E  ++                                         +  P+ +V W RV
Sbjct: 448  MEVPKQLLPEEKEEDKRNYDDYGLGNFRGYPKKKSKPKKRLSDEKIPESGPLAKVSWYRV 507

Query: 692  MLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAY 751
            +LDE  ++ +S   T   +    L A  RW L+GTP  N  +   S+ +  L+F   + Y
Sbjct: 508  VLDEAQSIKNSR--TQVARACWGLRAKKRWCLSGTPIQNAIDDLYSYFR-FLRFDPLDTY 564

Query: 752  GQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEE 811
                        + F +E+++  +R        ++  +K  L         +    F+EE
Sbjct: 565  ------------KSFRSEVKDPITR------NPVLGYKKLQL---------ILQAEFSEE 597

Query: 812  HAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVT- 870
                YN L +  RR   +         E  L           +R LR +C     +K T 
Sbjct: 598  ERIFYNSLELESRRQFQVY------AEEGTLQSNYVNILYMLLR-LRQACDHPLLVKETN 650

Query: 871  ------DAGEDIQE---TMDVLVENGLDPLSQ---------EYAFIKYNLLNGGNCLRHI 912
                  DA E++++      V ++N LD             E+A I +          H+
Sbjct: 651  NESTEFDAVENVKKLALERRVELQNTLDRNKSICTICADVPEWAVISW--------CGHV 702

Query: 913  LCLDCVA-----MDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ 967
             C  C++      D  +C  P C           LT   N N       +        RQ
Sbjct: 703  FCRQCISEKLATSDDTECPFPKCTIQLNSCLLYSLTALRNCNLGIEPTTNNNNKGKKKRQ 762

Query: 968  WSNTNTFLKQDLYRPNLESNKALP------------------DKVIIFSQFLEHIHVIEQ 1009
             ++TN ++        ++  K LP                  +K I+FSQ+   + ++E 
Sbjct: 763  PTDTNGWISSSKIEAVMKLLKNLPVKNPAGPAPDGTRRRAETEKAIVFSQWTSMLDLLEP 822

Query: 1010 QLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLME 1068
            QL  A ++F+ +   M    +  ++  F  +     ++M   +ASLGL++     V L++
Sbjct: 823  QLRKADLRFSRLDGTMTVVERDSAVTEFNTNPEVSVMIMSLKAASLGLNMVAACHVLLLD 882

Query: 1069 PIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKP 1128
              W+ + E+Q I RAHR+G TRP+HV    ++ T+E+++L      +R ++++     + 
Sbjct: 883  VWWNPTTEDQAIDRAHRIGQTRPVHVSRFTVKNTIEDRILAL---QERKKQMVSSAFGEN 939

Query: 1129 EREGARSHRTLHDF 1142
            E    +S  T+ D 
Sbjct: 940  EGNNQKSRLTMDDI 953


>gi|134078079|emb|CAK40162.1| unnamed protein product [Aspergillus niger]
          Length = 1166

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 142/610 (23%), Positives = 258/610 (42%), Gaps = 107/610 (17%)

Query: 585  KTLDNLAFDLAALRLALCEPLDSVRLYLSRA--------TLIVVPSYLVDHWKTQIQQHV 636
            KT++ L+  + + R+   +P D VRL  S +        TL++ P+ L+  W+++  +  
Sbjct: 539  KTIEMLSL-VHSHRIMPQKPTDLVRLPQSASGVVPAPYTTLVIAPTSLLSQWESEALKAS 597

Query: 637  RPGQLHLFVW------TDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSP-------- 682
            +PG +++ ++       + K   A   A   +++IT++  + +E+ +   +         
Sbjct: 598  QPGTMNVLMYYGADKNINLKNLCASGNAAAPNLIITSYGVVLSEYRQHMSALLSSMSSGG 657

Query: 683  MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPM 742
            +  V + RV++DE H + + L+ T K      L A++RW+LTGTP  N    +L  L  +
Sbjct: 658  LFSVDFFRVIVDEAHVIKNRLSKTAK--ACYELKATHRWVLTGTPIVN----RLEDLFSL 711

Query: 743  LKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQT------I 796
            ++FL  E +  N   W   I  PFE++       ++Q +   ++  R   ++T      +
Sbjct: 712  VRFLKVEPWN-NFSFWKTFITVPFESKDYVRALNVVQSVLEPLVLRRTKTMKTPEGEPLV 770

Query: 797  PLCIKEVTF--LNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTI 854
            PL  + +T   +   ++    Y+ +    ++      +N      +LL  K +      I
Sbjct: 771  PLPRRTITIEEVELPDQEREIYDLIFTRAKQT-----FNHNVEAGTLL--KSYSTIFAQI 823

Query: 855  RNLRLSCC--VAGHIKVTDAGEDIQETMDVLVENG--------LDPLSQEYAFIKYNLLN 904
              LR +CC  +    K  D   D+Q+ +D    +          DP ++  A     + N
Sbjct: 824  LRLRQTCCHPILTRNKAID-DMDLQDLIDRFKASTEAAESNEPQDPSAKFTAHALKQIQN 882

Query: 905  --GGNCLR---------------HILCLDCV----------AMDSE--KCSLPGCGF-LY 934
               G C                 H  C  C+           MD     C  P     ++
Sbjct: 883  EASGECPICSEEPMIDPAVTACWHSACKKCLEDYIRHQTDKGMDPRCFSCRAPTTSRDIF 942

Query: 935  EM---QSPEILTRPEN------PNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLE 985
            E+   +SP   T PE+      P P    P+  I L+  +    + +T  K      +L 
Sbjct: 943  EVVRHESPN--TTPEDDIYSSTPTPSQAPPR--ISLRRIHPLSPSAHTSAKVHALLAHLA 998

Query: 986  SNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF---RHDAS 1042
               A    V+ FSQF   + +I  QLT AGI    +   M    + ++L  F   RH  +
Sbjct: 999  RVPANTKSVV-FSQFTSFLDLISPQLTRAGIHHVRLDGTMPHKARAETLAQFNRHRHSTA 1057

Query: 1043 ----CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLA 1098
                 + L+   +  +GL+L+  + VF+M+P W  ++E Q I R HRMG TR + V    
Sbjct: 1058 PPPPTVLLISLRAGGVGLNLTAASNVFMMDPWWSFAIEAQAIDRVHRMGQTRDVQVTRFV 1117

Query: 1099 MRGTVEEQML 1108
            ++ ++E +ML
Sbjct: 1118 VKDSIEGRML 1127



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 17/114 (14%)

Query: 165 LKLFPHQQAAVEWMLHREWNAEVLR----HPLY------------IDLATEDGF-YFYVN 207
           L L  +Q+ A+ WML +E + +  R    HPL+             +L    G  +FYVN
Sbjct: 450 LHLRKYQRQALYWMLAKEKDNKSARETSLHPLWEEYSWPSRDVDDKELPAVAGIDHFYVN 509

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKI 261
             SG+++       +   GG+  DE GLGKTI  LSL+   +     P D V++
Sbjct: 510 PYSGELSLDFPVQEQHCLGGILADEMGLGKTIEMLSLVHSHRIMPQKPTDLVRL 563


>gi|302819037|ref|XP_002991190.1| hypothetical protein SELMODRAFT_429547 [Selaginella moellendorffii]
 gi|300141018|gb|EFJ07734.1| hypothetical protein SELMODRAFT_429547 [Selaginella moellendorffii]
          Length = 959

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 135/614 (21%), Positives = 239/614 (38%), Gaps = 135/614 (21%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVW-TDHKKPSAHSLAWDYDVVITTFNRLS 672
             TL++ P+ ++  W  +I+  V P   L + V+    +  SA  LA  YDVV+TT+  +S
Sbjct: 389  GTLVICPTSVLRQWAHEIKAKVTPAANLSILVYHGSSRTRSADDLA-KYDVVLTTYPIVS 447

Query: 673  AEWGRR-----------------------------------------KKSPMMQVHWLRV 691
             E  ++                                         +  P+ +V W RV
Sbjct: 448  MEVPKQLLPEEKEEDKRNYDDYGLGNFRGYPKKKSKPKKRLSDEKIPESGPLAKVSWYRV 507

Query: 692  MLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAY 751
            +LDE  ++ +S   T   +    L A  RW L+GTP  N  +   S+ +  L+F   + Y
Sbjct: 508  VLDEAQSIKNSR--TQVARACWGLRAKKRWCLSGTPIQNAIDDLYSYFR-FLRFDPLDTY 564

Query: 752  GQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEE 811
                        + F +E+++  +R        ++  +K  L         +    F+EE
Sbjct: 565  ------------KSFRSEVKDPITR------NPVLGYKKLQL---------ILQAEFSEE 597

Query: 812  HAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVT- 870
                YN L +  RR   +         E  L           +R LR +C     +K T 
Sbjct: 598  ERIFYNSLELESRRQFQVY------AEEGTLQSNYVNILYMLLR-LRQACDHPLLVKETN 650

Query: 871  ------DAGEDIQE---TMDVLVENGLDPLSQ---------EYAFIKYNLLNGGNCLRHI 912
                  DA E++++      V ++N LD             E+A I +          H+
Sbjct: 651  NESTEFDAVENVKKLALERRVELQNTLDRNKSICTICADVPEWAVISW--------CGHV 702

Query: 913  LCLDCVA-----MDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ 967
             C  C++      D  +C  P C           LT   N N       +        RQ
Sbjct: 703  FCRQCISEKLATSDDTECPFPKCTIQLNSCLLYSLTALRNCNLGIEPTTNNNNKGKKKRQ 762

Query: 968  WSNTNTFLKQDLYRPNLESNKALP------------------DKVIIFSQFLEHIHVIEQ 1009
             ++TN ++        ++  K LP                  +K I+FSQ+   + ++E 
Sbjct: 763  PTDTNGWISSSKIEAVMKLLKNLPVKNPAGPAPDGTRRRAETEKAIVFSQWTSMLDLLEP 822

Query: 1010 QLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLME 1068
            QL  A ++F+ +   M    +  ++  F  +     ++M   +ASLGL++     V L++
Sbjct: 823  QLRKADLRFSRLDGTMTVVERDSAVTEFNTNPEVSVMIMSLKAASLGLNMVAACHVLLLD 882

Query: 1069 PIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKP 1128
              W+ + E+Q I RAHR+G TRP+HV    ++ T+E+++L      +R ++++     + 
Sbjct: 883  VWWNPTTEDQAIDRAHRIGQTRPVHVSRFTVKNTIEDRILAL---QERKKQMVSSAFGEN 939

Query: 1129 EREGARSHRTLHDF 1142
            E    +S  T+ D 
Sbjct: 940  EGNNQKSRLTMDDI 953


>gi|330844016|ref|XP_003293935.1| hypothetical protein DICPUDRAFT_99797 [Dictyostelium purpureum]
 gi|325075687|gb|EGC29545.1| hypothetical protein DICPUDRAFT_99797 [Dictyostelium purpureum]
          Length = 1247

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 153/333 (45%), Gaps = 52/333 (15%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S  TLI+ P+ +++ W  ++  H  P   +L +      P A  L   YDVV+ T  ++S
Sbjct: 542 SSTTLIIAPNPILEQWSFELMYH--PRIKYLLIENKDNIPPASELV-KYDVVLLTHTKIS 598

Query: 673 A--------------------------------EWGRRKKSPMMQVHWLRVMLDEGHTLG 700
                                            ++     +P++Q++WLR+++DEGHT+G
Sbjct: 599 NSKILSNIKSKQNTTSSLYKSSRTQTANEEDDDDYLNSDINPLLQIYWLRIIIDEGHTIG 658

Query: 701 SS-LNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQ-LSHLQPMLKFLHEEAYGQNQKAW 758
           S+  NLT   + +  + +  RW+ +GTP  ++  SQ L +L+ +L FL  E Y  +   +
Sbjct: 659 STNSNLT---EFSNIILSERRWICSGTPISSSLLSQELINLKSLLCFLQVEPYNDSSTTY 715

Query: 759 DGGILRPFEAEMEEGRSRLLQLLHRCMI----SARKTDLQTIPLCIKEVTFLNFTEEHAG 814
              I +P      EG  R+ ++++R  +     + + D+   PL I     LN       
Sbjct: 716 SKIITQPINKFKIEGIQRVSEVMNRIGVRTPLKSIENDIVLPPLTI-STKKLNMEPNQIC 774

Query: 815 TYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGE 874
            YNEL   +  N+L + +  P   +SL + K   F    I+NLR SC  +   +  ++ +
Sbjct: 775 LYNELACIILTNLLASQYEGP---DSLYSSKNQTFAMIAIKNLRKSCFFS-EFQTEESRK 830

Query: 875 DIQETMD--VLVENGLDPLSQEYAFIK-YNLLN 904
           + +E+++  +L  N + PL  +Y  +  YN  N
Sbjct: 831 NTRESIENALLKSNTVIPLKDKYKLLSIYNYFN 863



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 67/125 (53%), Gaps = 4/125 (3%)

Query: 988  KALPDKVIIFSQFLEHIHVIEQQLTV-AGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
            K  P K I+F+QF E ++ IE  L     +K+    +      +  +++ F+ +     +
Sbjct: 1025 KEDPIKTIVFTQFNETLYEIEWSLKFKTNLKYLVYNTHQSLRERSSTINSFQTNQDYKII 1084

Query: 1047 LMDGS-ASLGLDLSFVTRVFLMEPI--WDRSMEEQVISRAHRMGATRPIHVETLAMRGTV 1103
            +M+   A+ G++L+    +  ++PI  W+ S E Q I RAHR+G T+P+ VE L +  ++
Sbjct: 1085 VMNVDLAAYGINLTAANHIIFVDPIPIWNISKERQAIKRAHRIGQTKPVTVEKLIINNSI 1144

Query: 1104 EEQML 1108
            E+ + 
Sbjct: 1145 EQTLF 1149



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 10/113 (8%)

Query: 154 CLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLY--IDLAT-------EDGFYF 204
            L   I    K KL+ +Q+ +++ M+ RE N +    P +  +  AT        DG   
Sbjct: 345 ALVEPIYLNQKKKLYNYQKLSLQRMIDREINIKQYADPRWKVVHDATSDDGEMERDGLLL 404

Query: 205 YVNTVSGD-IATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPP 256
             N ++G+       P + D  GG+ C+E G GKTI  ++L+L T G+ +  P
Sbjct: 405 IENLLTGERKKVEELPKLNDIRGGILCEEMGTGKTIICIALVLSTLGSYSRVP 457


>gi|449019079|dbj|BAM82481.1| probable DNA repair protein RAD5 [Cyanidioschyzon merolae strain 10D]
          Length = 1126

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 132/570 (23%), Positives = 232/570 (40%), Gaps = 82/570 (14%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQ---LHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
             TLIV P  ++  W  ++  HV       +H++ + + ++     LA  + VVITT+  L
Sbjct: 530  GTLIVCPMSILSQWCAELNTHVADDADFIVHIY-YANDRETDPLVLA-RFQVVITTYGTL 587

Query: 672  SAEWGRRKKSP------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTG 725
             + W   +++       +  + W R++LDE H + +  +  ++    + L +  RW LTG
Sbjct: 588  YSTWKSTQQTESAEARGLYALRWHRLILDEAHVIKNPSSGCSR--AVLDLRSRYRWALTG 645

Query: 726  TPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFE----AEMEEGRSRLLQLL 781
            TP  N     L  + P+L+FL  E +  +   W   I RPFE    A+M+   S L  +L
Sbjct: 646  TPLQN----NLEDIYPLLRFLAVEPWS-DASLWKRYIARPFESGQAAKMQAALSLLSSIL 700

Query: 782  HRCMISARKTDLQ--------TIPLCIKEVTFLNFTEEHAGTYNEL--VVTVRRNILMAD 831
               M+   K  L          +P    EV +++ +      Y+ +      R +  +AD
Sbjct: 701  QPLMLRRTKRTLDEHTGAPILELPAKQTEVVYVDLSAAERQLYDAVYKASRARFSTFLAD 760

Query: 832  WNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVEN-GLDP 890
             N  +   + +     + R      L +  C A  + +    +D+Q+ M  L E  G D 
Sbjct: 761  -NQITFYLTTVFEMLMRIRQLCDHPLLIMSCPARDLHIL---QDVQKFMQRLTEGRGSDQ 816

Query: 891  LSQEYAFIKYNLLNGGNCLRHI--------LCLDCVAMDSEKCSLPGCGFLYEMQSP-EI 941
             +     +   L    +  R I        LC  C+    +  +L  C  ++       +
Sbjct: 817  ATTYLETLAGQLQQSLHDERSIESSTNTKPLCPICLESIDDAVALRNCAHVFCRDCILTL 876

Query: 942  LTRPENPNPKWPVPQ------DLIEL--QPSYRQWSNTNTFLKQDLYR---------PNL 984
            L    + N + PV +      D++    +  +R       FL   L R            
Sbjct: 877  LLSNRHGNAQCPVCRKGCSFADVMSTPRRSRFRVDLERGFFLSTKLARLVNDLVEAVQAF 936

Query: 985  ESNKALPDKVIIFSQFLEHIHVIEQQLTV-------AGIKFAGMYSPMHSSNKIKSLDMF 1037
            E +     K ++FSQ+   + +IE+ L            +   +   +  S +   L+ F
Sbjct: 937  ERDPVRHGKCVVFSQWTGMLDLIERALQAWNHEHARTLFQVGRLDGTLSQSRRTAVLEAF 996

Query: 1038 -RHDASCLALLMDG----------SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRM 1086
               + S  A    G          +  +GL+L+  + VFL++P W+  +EEQ + R HRM
Sbjct: 997  ATMNPSTSAATATGRMNVLLASLRAGGVGLNLTAASSVFLVDPWWNPYVEEQAMDRVHRM 1056

Query: 1087 GATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            G TR + +    +R +VEE+ML  LQD  R
Sbjct: 1057 GQTRTVQIRRYIVRDSVEERML-LLQDKKR 1085



 Score = 48.1 bits (113), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 17/91 (18%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATE-----------DGFYFYVNTVSGDIAT 215
           L P+QQ+A+ WM+ RE      R P +   + +           DG  ++ + VSG ++ 
Sbjct: 381 LRPYQQSALNWMVARE------RAPSHTPSSDDTQQTWREQRLPDGTRYFQHRVSGRVSL 434

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
               T     GG+  DE GLGKT+ A+SL+L
Sbjct: 435 QPPMTSPAVAGGILADEMGLGKTVEAISLML 465


>gi|310792112|gb|EFQ27639.1| SNF2 family domain-containing protein [Glomerella graminicola
           M1.001]
          Length = 1103

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 14/219 (6%)

Query: 604 PLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDV 663
           PL ++ L  S+ATL+V P   V +W+ QI+QH+ PGQ+  +++    +        D+D+
Sbjct: 509 PLTNIALN-SKATLLVCPLSTVTNWEEQIKQHIAPGQMSYYIYHGSNRIKDVEKLADFDL 567

Query: 664 VITTFNRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
           VITT+  +S+E G R K      P+ ++ W R++LDE H +     L  + +  + L A+
Sbjct: 568 VITTYGSVSSELGARSKRKSGKYPLEEIGWFRIVLDEAHMIREVATL--QFKAIVRLQAA 625

Query: 719 NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL 778
            RW +TGTP  N    +L  L  +L+F+  + +    K ++  I+ PF+A   E   +L 
Sbjct: 626 RRWAVTGTPVQN----RLEDLAALLQFIRLKPFDDRNK-FNRFIVDPFKACDTEIVPKLR 680

Query: 779 QLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYN 817
            L+    +  R  D   +P     V  L+FT E    Y+
Sbjct: 681 VLVDSVTLR-RLKDKINLPPRSDHVVKLDFTAEEREVYD 718



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 1/131 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG 1050
            P K ++FS +  H+ +I+  L   GIK+  +   M    + +++D FR D S   +L+  
Sbjct: 946  PYKSVVFSTWTSHLDLIQMALDNVGIKYVRLDGSMTRVARTQAMDSFRDDNSVHVILVSI 1005

Query: 1051 SAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            +A  LGL+L+  + V++MEP ++ + E Q I R HR+G  RP+      MR + EE+MLE
Sbjct: 1006 TAGGLGLNLTAGSSVYVMEPQYNPAAEAQAIDRVHRLGQKRPVRTVRYIMRNSFEEKMLE 1065

Query: 1110 FLQDTDRCRRL 1120
              +  ++   L
Sbjct: 1066 LQEKKNKLASL 1076


>gi|255716748|ref|XP_002554655.1| KLTH0F10406p [Lachancea thermotolerans]
 gi|238936038|emb|CAR24218.1| KLTH0F10406p [Lachancea thermotolerans CBS 6340]
          Length = 765

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 123/553 (22%), Positives = 232/553 (41%), Gaps = 82/553 (14%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            + +L+V P+  +  WK +I+QH   G+L  +++    + S      D DV++TT++ L +
Sbjct: 206  KPSLVVAPTVALMQWKNEIEQHT-GGKLKTYIYHGANRTSNVGEFKDVDVLLTTYSVLES 264

Query: 674  -----EWGRRKK-------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRW 721
                  +G R+K       S +  +++ RV+LDE H +      +N  +   SL    +W
Sbjct: 265  VFRKQTYGFRRKNGVYKERSVLHNMNFYRVILDEAHNIKDRQ--SNTAKAVNSLITEKKW 322

Query: 722  LLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQ--------NQKAW--------DG----- 760
             LTGTP  N    ++  +  +++FL+ + + +          + W        DG     
Sbjct: 323  CLTGTPLQN----RIGEMYSLIRFLNIDPFSKYFCTKCNCESREWKFTDRMHCDGCGHVV 378

Query: 761  ------------------GILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKE 802
                              GI  P     +  ++ L  ++ R     R  DL  +P  I  
Sbjct: 379  MQHTNFFNHFALKNIQKHGIEGPGLESFQNIQTLLKNIMLRRTKVERADDL-GLPPRIVT 437

Query: 803  VTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
            V    F EE    Y  L   V+R          S+VE  +    +    T I  +R    
Sbjct: 438  VRRDYFNEEEKDLYRSLYTDVKRKF-------NSYVEEGVVLNNYANIFTLITRMRQ--- 487

Query: 863  VAGH----IKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCV 918
            +A H    +K    G  + +  +V+V    D  ++E    K +      C++  +  +  
Sbjct: 488  LADHPDLVLKRMKNGIGVDD--NVIVCQLCDDEAEEPIESKCHHKFCRLCIKEYI--ESF 543

Query: 919  AMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQD 978
              + EK + P C     +   +     ++   K     + + +Q S+R  +     L ++
Sbjct: 544  MENLEKLTCPVCHIALSIDLSQPALEFDDAAQKKQSIVNRLNIQGSWRSSTKIEA-LVEE 602

Query: 979  LYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR 1038
            LY  NL S++    K I+FSQF   + ++E +L  AG +   +   M  + + +++  F 
Sbjct: 603  LY--NLRSDRRTI-KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMTPTQRDQTIKYFM 659

Query: 1039 HDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
             +  C   L+   A  + L+L   ++VF+M+P W+ S+E Q   R HR+G  RP+ +   
Sbjct: 660  ENTHCEVFLVSLKAGGVALNLCEASQVFIMDPWWNPSVEWQSGDRVHRIGQYRPVKITRF 719

Query: 1098 AMRGTVEEQMLEF 1110
             +  ++E +++E 
Sbjct: 720  CIEDSIESRIIEL 732


>gi|327268904|ref|XP_003219235.1| PREDICTED: transcription termination factor 2-like [Anolis
            carolinensis]
          Length = 1233

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 128/542 (23%), Positives = 233/542 (42%), Gaps = 97/542 (17%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            +TLIV P+ L+ HWK +I++HVR G L + ++    +    ++  +YDVV+TT++ L+ E
Sbjct: 710  STLIVCPASLIHHWKNEIERHVRSGNLKVCLYHGPNRIKNTTVLSEYDVVVTTYSILAKE 769

Query: 675  WGRRKK------------------SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS- 714
               +K+                  SP+  +HW R++LDE H      N+ N K+Q +++ 
Sbjct: 770  IPTQKEEVEAAAEDFVVQDKSLPFSPLPWIHWARIILDEAH------NIKNPKVQASMAA 823

Query: 715  --LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEE 772
              L A+ RW +TGTP  N     L  +  +L+FL    + +  K W   +    +    +
Sbjct: 824  CKLRATARWAVTGTPIQNN----LLDMYSLLRFLRCSPFDEF-KVWRNQV----DNNTRK 874

Query: 773  GRSRLLQLLHRCMISAR---KTDLQTIPLCI-----KEVTFLNFTEEHAGTYNELVVTVR 824
            G  R L +L R ++  R   + DL   PL +       +  L  +EE    Y        
Sbjct: 875  GGER-LAILTRSLLLRRTKDQLDLSGKPLVLLPQRHTRLHRLKLSEEEQSVY-------- 925

Query: 825  RNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLV 884
             ++L A                 + RST    LR     +G    +  G    +      
Sbjct: 926  -DVLFA-----------------RSRSTLQSYLRRQEAQSG--TGSTGGNPFDKGSQQFR 965

Query: 885  ENGLDPL---SQEYAFIKYN------LLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYE 935
             N  DP+   SQ+   I         LL    C  H+  L  VA+D    +  G     E
Sbjct: 966  PNQQDPMGKISQDNPPISTTIHILSLLLRLRQCCCHLSLLK-VALDQANLASEGISLTLE 1024

Query: 936  MQ-SPEILTRPENPNPKWPV----PQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKAL 990
             Q +   L+ P++ +P+  V        +EL  + RQ +  +  L +      L++ +  
Sbjct: 1025 EQLNALTLSEPDSSDPQSVVYLFGAAFSVELFEATRQSTKLSHLLNE------LKAIQGH 1078

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG 1050
              K +I SQ+   + V+   L   G+K+A +   ++   ++  ++ F ++     +++  
Sbjct: 1079 SQKSVIVSQWTSMLKVVAVHLKKLGLKYATVDGSVNPKQRMDVVEEFNNNPKGPEVMLIS 1138

Query: 1051 --SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +  +GL+L     +FL++  W+ ++E+Q   R +R+G    + +     + TVEE++ 
Sbjct: 1139 LLAGGVGLNLVGGNHLFLLDMHWNPALEDQACDRIYRVGQRNDVTIHRFVCKRTVEEKIS 1198

Query: 1109 EF 1110
            E 
Sbjct: 1199 EL 1200


>gi|302828188|ref|XP_002945661.1| hypothetical protein VOLCADRAFT_115608 [Volvox carteri f.
            nagariensis]
 gi|300268476|gb|EFJ52656.1| hypothetical protein VOLCADRAFT_115608 [Volvox carteri f.
            nagariensis]
          Length = 935

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 113/521 (21%), Positives = 226/521 (43%), Gaps = 49/521 (9%)

Query: 629  KTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHW 688
            + +IQ+H   G L ++ +    +  + S    +DVV+TT++ L  +    +   ++ V W
Sbjct: 402  RRKIQEHT-AGNLKVYQYHGPDRSRSPSFLASHDVVLTTYSVLGGDLADGRG--LLSVKW 458

Query: 689  LRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHE 748
            LRV+LDE H + +     +  Q A  L A  +W +TGTP  N    +L  L  ++ +L  
Sbjct: 459  LRVVLDEAHAVKNPRAKWS--QAAAKLKAERKWAVTGTPIQN----RLRDLHGLVCYLGL 512

Query: 749  EAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ-------TIPLCIK 801
            E   Q +  +   + RP + + +    + LQ+L R +   R  DLQ        +P    
Sbjct: 513  EPL-QERSIFTRVLERPLK-DCDPRAVKKLQVLMRTIAMRRTKDLQINGRPLVVLPRKTI 570

Query: 802  EVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSC 861
             +  ++ T E    Y+ L +  R+ I  A     + +E+ ++  +   R   + +    C
Sbjct: 571  NIVTVHLTREDRVKYDALELQGRQVIAHA-LQSQTLLENYMSVLEIILRLRQVADA--GC 627

Query: 862  -CVAGHIKVTDAGEDIQETMDVLVENGLDPL---SQEYAFIK-------------YNLLN 904
             C    + +T+A               + P    ++ ++ ++                LN
Sbjct: 628  LCTRDPLPLTEAAAAAAAPAAAGARQQVGPALTDAERHSLVELLTAGLQDDCPICMESLN 687

Query: 905  GGNCL---RHILCLDCVAMDSEKCSLPGCGFLY-EMQSPEILTRPENPNPKW--PVPQDL 958
               C+   RHI C  C+     + + PGC     ++   +I+  P +   +       D+
Sbjct: 688  QTACITRCRHIFCKACIENVIARAAGPGCPMCRTKITMLDIVELPPDAATEQLTQAGSDV 747

Query: 959  IELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKF 1018
             + + +  + +     L+    +  +  +   P K ++FSQF   ++++ + L  AG+++
Sbjct: 748  ADPEGASAKVAALMAALRSAAAQQPMYGSGG-PIKSVVFSQFTGMLNLVGRALEAAGMRY 806

Query: 1019 A---GMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSM 1075
                G       ++ ++       D+  + L+   +  +G++L+  + V L++P W+ S+
Sbjct: 807  VRLDGCTPAKARADMVRDFARREPDSPVVFLVSLKAGGVGMNLTAASHVHLLDPWWNPSV 866

Query: 1076 EEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            EEQ + R HR+G TR + V       T+EE+ML  LQ+  R
Sbjct: 867  EEQAMDRVHRLGQTRDVEVFRYVAADTIEERML-LLQERKR 906


>gi|219111145|ref|XP_002177324.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411859|gb|EEC51787.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1337

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 148/350 (42%), Gaps = 76/350 (21%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHV-------------RPGQLHL------------- 643
           L  S ATL+VVP+ L+DHW+ QI  ++               G+ H              
Sbjct: 573 LVSSSATLLVVPAVLLDHWQAQIDLNLDLSYCTDKIPLIFEFGRKHKGLTMEAVCAICKD 632

Query: 644 ------FVWTDH----KKPSAHSLAWDYDVVITTFNRLSAEWGR---------------- 677
                  V+ D     K P+   LA  + +VITT  R S EW                  
Sbjct: 633 NGSHFPMVFIDRGGTKKLPAPEFLAM-FQIVITTTQRFSQEWRNGSFQAELKSSGCKEVS 691

Query: 678 ---------RKKS--PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
                    R +S  P++++HWLR+++DEGH++  + N T  +Q A  ++A  RW +TGT
Sbjct: 692 KLYLDSAFDRSESACPLLKIHWLRMIVDEGHSMAKNQNST--IQFASWISAERRWAMTGT 749

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYG---QNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
           PT  +  +Q+  +  ML+FL    +         W   + R ++        RL  LL  
Sbjct: 750 PTKQSA-TQIQQIYAMLRFLGHGFFTPRLDGNAVWTSNVARCWKEGSFAAFFRLRSLLGL 808

Query: 784 CMISARKTDLQ--TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSH--VE 839
            M    K D+    +P C  EV  ++F E    TYN LV  V+ NIL+   +  +    +
Sbjct: 809 LMKRHTKRDIAELELPCCSAEVIPMSFVE--VTTYNTLVCGVQSNILLTSMSGKTSGLQD 866

Query: 840 SLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLD 889
           SLL+  Q +     + NLR  C     +  T       ETM +L E+G D
Sbjct: 867 SLLHRSQVQHARAALSNLRRVCVGYSRVLPTLETRFYIETMVLLKEHGRD 916



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 12/125 (9%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMY-----SPMHSSNKIKSLDMFRHDASCLA 1045
            P K+I+FSQF        Q L +AG +    +     +    S +   L  F +D  C  
Sbjct: 1125 PLKIIVFSQF-------RQALNMAGNRLLRKFGTACIAEYWGSFRTTELRKFTYDRDCFC 1177

Query: 1046 LLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            +L+    S GLDLSFVT +F +E I D+S+ +Q I+RA RMGA   + V TL    TVEE
Sbjct: 1178 MLLGRDGSEGLDLSFVTHIFFLEEIMDQSLRDQAIARAWRMGAKGRVRVVTLTAAKTVEE 1237

Query: 1106 QMLEF 1110
             M E 
Sbjct: 1238 TMQEI 1242



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 41/157 (26%)

Query: 137 LGPIDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWN------------ 184
           L P  L  +  +C +L     +++P +KL+L+ HQ +++ WM +RE N            
Sbjct: 269 LKPRSLDALRCSCSYLHNTLRAVVPGLKLRLYSHQVSSLIWMRNRETNLLSEKDCLSTTP 328

Query: 185 -----------------AEVLRH-----PLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
                              +LR       L I +  + GF      V  D+ T      R
Sbjct: 329 LPDSPDRDLHRMVTGGYTTLLRSRCPLSDLSIRIDQKTGF----EIVPKDLTTLPRTVAR 384

Query: 223 DFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGV 259
              GG+ CD+PGLGKT+T LSLI++T G      D V
Sbjct: 385 ---GGLLCDDPGLGKTVTVLSLIMQTAGLSTKANDTV 418


>gi|452847185|gb|EME49117.1| hypothetical protein DOTSEDRAFT_67996 [Dothistroma septosporum NZE10]
          Length = 495

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 217/492 (44%), Gaps = 58/492 (11%)

Query: 674  EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNTP 732
            EW  R    +  ++W R++LDEGH +    N   K  MA+ SL + +RW+LTGTP  N+ 
Sbjct: 11   EWKLRAHG-LYSMNWRRIILDEGHQV---RNPKTKGSMAVCSLFSRSRWVLTGTPIVNS- 65

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               L+ L  +L+F+         + ++  ++RP +   +E  + LL+ + +     R+ D
Sbjct: 66   ---LADLYSLLRFVGVSGGLDRLEMFNRVLVRPIK-NGDESATSLLKAIMKAFTLRRRKD 121

Query: 793  LQTIPLCIKE----VTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSH----------- 837
            ++ I L + +    V  ++FTE+    Y+ L +  +   +M  ++D  +           
Sbjct: 122  MKFIDLKLPKLEEFVHRIDFTEKEKERYDALFLQAKG--MMKTYSDKRNSGAEGASSAYQ 179

Query: 838  --VESLLNPKQ----WKFRSTTIRNLRLSCCVAGHIKVT-DAGEDIQETMDVLVENGLD- 889
              +E LL  +Q    W   +  + NL         + +T +  + +Q+ + V +E+  D 
Sbjct: 180  HLLEILLRMRQCCNHWLLCAERVTNLLTQLETQKTVSLTPENKKALQDVLQVQIESQEDC 239

Query: 890  PLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPN 949
            P+  +        + G +  +   C+  V     KC  P C    E+    +L  P N  
Sbjct: 240  PICLDSLHHPVISVCGHSFGQE--CISKVIEQQHKC--PMC--RAELPDETVLVGPANGC 293

Query: 950  PKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQ 1009
                   DL   Q S +          + L R  LE+ K   +K ++FSQ+   +  ++ 
Sbjct: 294  GDESATDDLDLTQSSSKL---------EALVRI-LEATKGNGNKTVVFSQWTRCLDNVQS 343

Query: 1010 QL-TVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLM 1067
            +L      K+  +   M +S + ++L     D     +L   G  ++GL+L+    V L 
Sbjct: 344  RLDNEKSYKYCRLDGTMSASERDEALQSLEQDKDTTVMLASLGVCAVGLNLTAANSVILC 403

Query: 1068 EPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVK 1127
            +  W  ++E+Q + R HR+G TR   V  L M G++EE  L    D    R+L+     +
Sbjct: 404  DTWWAPAIEDQAVDRVHRLGQTRETRVFRLVMDGSIEEDTLAVQADK---RKLMMVAFSE 460

Query: 1128 P--EREGARSHR 1137
               +R+GARS R
Sbjct: 461  KSNKRDGARSGR 472


>gi|344303313|gb|EGW33587.1| hypothetical protein SPAPADRAFT_71410 [Spathaspora passalidarum NRRL
            Y-27907]
          Length = 1135

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 144/617 (23%), Positives = 254/617 (41%), Gaps = 125/617 (20%)

Query: 590  LAFDLAALRLALCEPLD-----SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLF 644
            L   ++AL L    P D     S + Y S+ TLIVVP  L+  WK + ++       +  
Sbjct: 516  LGKTISALALVNSVPYDTNPEKSNKPYASKTTLIVVPMSLLSQWKQEFEKCNNNNNHYCK 575

Query: 645  VWTDHK------------KPSAH---SLAWDYDVVITTFNRLSAEWGRRKKSP---MMQV 686
            ++   +            KP+A     +   Y  V+  F R++     + + P   +  V
Sbjct: 576  LYYGDEIESNLTWSLCSTKPNAKIPTVMITTYGTVLNEFTRIARARDEKGELPPIGLYSV 635

Query: 687  HWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
             + R+++DEGH + +    T K      L +S +W+LTGTP  N    +L  L    KFL
Sbjct: 636  KFFRIIIDEGHNIRNRNTKTAK--SLYELESSRKWILTGTPIVN----RLDDLYSFTKFL 689

Query: 747  HEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCM--ISARKT------------D 792
              + +  N   W   +  PFE   +   S+ L ++   +  I  R+T            +
Sbjct: 690  QLDPWS-NFSYWKTFVTLPFE---QRKISQTLDVIKSILEPIFLRRTKAMKGRDGRPLVE 745

Query: 793  LQTIPLCIKEVTFLNFTEEHAG-----TYNELVVTVRRNILMADWNDPSHVESLLNPKQW 847
            L +  + I+E+ F +  E+  G      +N     ++   L+               +Q+
Sbjct: 746  LPSKEVIIEEIKFNDQEEKLYGYFKARAFNSFAEGLKSGQLL---------------RQY 790

Query: 848  KFRSTTIRNLRLSCC----VAGHIKVTD------AGEDIQETMDVLVENGLDPLSQEYAF 897
                T I  LR  CC    + G  ++ D      + ED+++ +  + E   +    ++A 
Sbjct: 791  TQILTHILRLRQVCCHVDLIGGAHEMDDEIIDLESDEDMKKFLKSIKEQQQNRFENDHAV 850

Query: 898  IK--YNLLNGGNCLRHILCLDCVA--MDSEKCSLPGCGFLYEMQSP-EILTRPEN----P 948
             K  Y+L +  + + +  C  C    +   + ++  CG  Y +    E L  P      P
Sbjct: 851  KKTMYSLYSKVD-IENSECSICTQSPIPFGEMTITPCGHSYCLTCLLEHLDFPTTTKTCP 909

Query: 949  NPKWPVPQDLI-----------ELQPSYRQWSNTNTFLKQDLYRPNLESNK--------- 988
            N + P+ +  +           E++   ++    N   +  LY PN  S+K         
Sbjct: 910  NCREPISKYQLFRLRNQKTTANEIRFHTKEPKAENYPFQLYLYDPNRSSSKIQALIKHLH 969

Query: 989  ----ALPD-KVIIFSQFLEHIHVIEQQLTVAG------IKFAGMYSPMHSSNKIKSLDMF 1037
                  P+ KVI+FSQF  ++ +IE +L V         KF G    ++   + K LD F
Sbjct: 970  DIKSQTPNSKVIVFSQFSSYLDIIETELKVQQDNDFVIYKFDGR---LNLKERQKLLDDF 1026

Query: 1038 RHDAS----CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIH 1093
              + S     + LL   +  +GL+L+  +R F+M+P W  S+E+Q I R HR+G    + 
Sbjct: 1027 NKELSDGKIAILLLSLKAGGVGLNLTTASRAFMMDPWWSPSIEDQAIDRIHRIGQNETVK 1086

Query: 1094 VETLAMRGTVEEQMLEF 1110
            V    M  ++E +ML+ 
Sbjct: 1087 VVRFIMENSIETKMLKI 1103



 Score = 43.5 bits (101), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)

Query: 199 EDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           ED F FY N  +G+++           GG+  DE GLGKTI+AL+L+
Sbjct: 481 EDEF-FYANVYNGELSVEKPIIKNSLRGGILADEMGLGKTISALALV 526


>gi|344300364|gb|EGW30685.1| hypothetical protein SPAPADRAFT_142059 [Spathaspora passalidarum NRRL
            Y-27907]
          Length = 731

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 131/618 (21%), Positives = 235/618 (38%), Gaps = 143/618 (23%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPG---QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
            + TLI+ P  L+  W  +I+         ++ +F   D K  S  S    YDV++T++  
Sbjct: 93   KTTLIIAPVSLLQQWAAEIESKTVASYQPRIGIFHGMDKKNMSTFSDCQKYDVILTSYGT 152

Query: 671  LSAEW-----------------------GRRKKSPMM--QVHWLRVMLDEGHTLGSSLNL 705
            LS+EW                       G+  +SP       + R++LDE   + + + +
Sbjct: 153  LSSEWKRHFKEALANSDTKAYLPSSKEGGKSYESPFFANDAKFNRIILDEAQAIKNKMAI 212

Query: 706  TNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRP 765
             +K      L A+ R+ L+GTP  N     L  L P+++FL    Y  N+  +   I+ P
Sbjct: 213  ASK--AVTYLQANYRFCLSGTPMQNN----LEELYPIIRFLRIRPY-LNEGKFRADIVIP 265

Query: 766  FEA------EMEEGRSRLLQLLHRCMISARKTD------LQTIPLCIKEVTFLNFTEEHA 813
             ++      + +    +L  +L   ++   K        +  +P  I E  ++    E  
Sbjct: 266  LKSNKYDKYDRKSSMKKLQAILSSILLRRTKNSIIDGKPILQLPEKIIESDYVKLESEEM 325

Query: 814  GTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS---TTIRNLRLSCCVAGHIKV- 869
              Y +L   ++           S  + LL+ K   F S   T +  LR +CC +  +K+ 
Sbjct: 326  AYYRDLESGIQ-----------SRAKRLLSEKS--FSSGILTLLLRLRQACCHSYLVKIG 372

Query: 870  --------TDAGEDIQ-----------ETMDVLVENGLD---------PLSQEYAFIKYN 901
                     +  E+I+           E  D++    +D         PL  +      +
Sbjct: 373  ELKAKQKELEQNENIKIDWRRMYRMVLELKDLVKTRVIDLTMPSEAVIPLDIDLGLEDDD 432

Query: 902  LLNGGNCLRHILCLDCVAMDSEKCSLPGCGFL---------YEMQSPE-------ILTRP 945
              +    L   +C D + +DS       CG L         YE  + +       I    
Sbjct: 433  EKDDKEMLTCPICFDILNLDSSMVLFSECGHLICQNCIEAFYEGHTVDEDSSGNRIAKCT 492

Query: 946  E-NPNPKWPVPQDLIELQPSYRQWSNTNTFLK--QDLYRPNLESNKALPDKVI------- 995
            E N + K     D +  +  Y +  +T    +  +D Y PN   N  + + +I       
Sbjct: 493  ECNASVKESNLIDYVIFKAVYIEKMDTMEIQRFCRDYYNPNPRGNSMIVNDLIKEDNGFT 552

Query: 996  -------------------------IFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNK 1030
                                     +FSQF+    + +  L   GI+F      M+  +K
Sbjct: 553  PSAKMEKCVELLQTIFSKHPNEKVIVFSQFVTLFDLFKLVLNQQGIEFLRYDGSMNMEHK 612

Query: 1031 IKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATR 1090
               +  F      + LL   S ++GL L+  + V +M+P W+  +E+Q + RAHR+G  R
Sbjct: 613  NTVIKQFYQSDIKVLLLSLRSGNVGLTLTCASHVIIMDPFWNPYVEDQAMDRAHRIGQER 672

Query: 1091 PIHVETLAMRGTVEEQML 1108
             +HV  + + GTVE +++
Sbjct: 673  EVHVHRILIEGTVESRIM 690


>gi|395528054|ref|XP_003766148.1| PREDICTED: helicase-like transcription factor, partial [Sarcophilus
           harrisii]
          Length = 999

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           RATLI+ P  ++ +W  Q  QH++    L+L+V+    +    +L    D+V+TT+N L+
Sbjct: 466 RATLIICPLSVLSNWIDQFGQHIKSDVHLNLYVYYGPDRSKDPALLSKQDIVLTTYNILT 525

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G R  SP+ ++ WLRV+LDEGHT+ +      + + A+ L A  RW+LTGTP  N+ 
Sbjct: 526 YDYGSRGDSPLHKIRWLRVILDEGHTIRNP--NAQQTKAALDLDAERRWVLTGTPIQNS- 582

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 583 ---LKDLWSLLSFLKLKPF-TDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 637



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + ++E  L  +G  F  +   M    +++S+  F+   +    + LL  
Sbjct: 843  KSLVVSQFTTFLSLLETPLKASGFVFTRLDGSMAQKKRVESIQCFQKTEAGSPTIMLLSL 902

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+L   +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 903  KAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVVITKFIVKDSVEENMLK 962

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 963  -IQNKKR 968


>gi|71653924|ref|XP_815591.1| DNA repair protein [Trypanosoma cruzi strain CL Brener]
 gi|70880657|gb|EAN93740.1| DNA repair protein, putative [Trypanosoma cruzi]
          Length = 748

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 119/543 (21%), Positives = 228/543 (41%), Gaps = 106/543 (19%)

Query: 616  TLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TL+VVP+ L+  WK++I+  V+P + L +F++    K   ++    YD VITT++ L++ 
Sbjct: 212  TLVVVPAALMLQWKSEIEAKVKPSRGLKVFLYHGTNKSITNTELELYDFVITTYDTLTSS 271

Query: 675  ---------------WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
                           + RR+  P+  V W R++LDE H +  +   T + +    L   +
Sbjct: 272  AQFALTPIFDDKNMSFNRREAGPLFHVRWKRIILDEAHMIRHA--NTQRWRAVKELQGFH 329

Query: 720  RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEA----EMEEGRS 775
            RW++T TP  NT    +  LQ +L F+     G  +     G   P E      ++ G +
Sbjct: 330  RWVVTATPLHNT----IEDLQNLLHFV-----GLPRLPLLPG-FNPEEVLNDPVLQRGIA 379

Query: 776  RLLQ--LLHR--CMISARKTD-LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMA 830
            R +Q   L R   MI   K + L  +P   + V    F+   +  YN ++   R  +  +
Sbjct: 380  RSIQPAFLRRGPVMIRNGKEEILVKLPPKTENVVMKRFSIHESKQYNSILARSRTALATS 439

Query: 831  DWNDPS-HVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLD 889
            +  + + H+ +++              LR +CC   H  +++          +     + 
Sbjct: 440  ERKEGAFHIFAMMT------------RLRQACC---HPWISEGRALSVSVCGICRSEAVS 484

Query: 890  PLSQEYAFIKYNLLNGGNCLRHILCLDCV------AMDSEKCSL----PGCGFL------ 933
             ++ +                H  C +C+      A+D E+ ++    P CG        
Sbjct: 485  TVTTKCG--------------HYFCYECLLLRFREAVDGEEMAVRLPCPTCGTTITNSSV 530

Query: 934  ---YEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKAL 990
               Y + S E + + +  +         +E+    R   ++   +K++   P+       
Sbjct: 531  FKSYTLTSSERIAKFKKRD---------LEMSTKLRMILDSIDTMKKEY--PD------- 572

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG 1050
             DK+IIFS F   + VI   L    I    +   M  +N+   +  F+       +L   
Sbjct: 573  -DKMIIFSHFTSFMDVISVALDKLEISHLRLDGTMTLTNRNTVIRRFQASDDVRVILASK 631

Query: 1051 SAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            +A+ +GL+L+    V +++P W+ ++EEQ + R +R+G  + +HV  + +  T+E+   E
Sbjct: 632  TATGVGLNLTAANHVLVVDPWWNPAIEEQAVHRCYRIGQKKHVHVTRIIIEDTIEQYCHE 691

Query: 1110 FLQ 1112
              Q
Sbjct: 692  ICQ 694


>gi|334347330|ref|XP_003341917.1| PREDICTED: helicase-like transcription factor [Monodelphis
           domestica]
          Length = 1008

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           RATLI+ P  ++ +W  Q  QH++    L+L+V+    +    +L    D+V+TT+N L+
Sbjct: 475 RATLIICPLSVLSNWIDQFGQHIKSDVHLNLYVYYGPDRSKDPALLSKQDIVLTTYNILT 534

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G R  SP+ ++ WLRV+LDEGHT+ +      + + A+ L A  RW+LTGTP  N+ 
Sbjct: 535 YDYGSRGDSPLHKIRWLRVILDEGHTIRNP--NAQQTKAALDLEAERRWVLTGTPIQNS- 591

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 592 ---LKDLWSLLSFLKLKPF-TDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 646



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 25/196 (12%)

Query: 942  LTRPENPNPKWPV------PQDLIELQPSYRQWSNTNTFLKQDL-----------YRPNL 984
            + R E PN K P+       ++L+E  P   +  N NT  K DL               +
Sbjct: 786  VIRSEQPNAKCPLCRNDLRAENLVECPP---EELNCNTEKKTDLEWMSSSKINALMHALI 842

Query: 985  ESNKALPD-KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS- 1042
            E  K  P  K ++ SQF   + ++E  L  +G  F  +   M    +++S+  F+   + 
Sbjct: 843  ELRKKNPQIKSLVVSQFTTFLSLLETPLKASGFVFTRLDGSMAQKKRVESIQCFQKTEAG 902

Query: 1043 --CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR 1100
               + LL   +  +GL+L   +RVFLM+P W+ + E+Q   R HR+G  + + +    ++
Sbjct: 903  SPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVVITKFIVK 962

Query: 1101 GTVEEQMLEFLQDTDR 1116
             +VEE ML+ +Q+  R
Sbjct: 963  DSVEENMLK-IQNKKR 977


>gi|374108998|gb|AEY97904.1| FAFR220Wp [Ashbya gossypii FDAG1]
          Length = 1085

 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 130/586 (22%), Positives = 235/586 (40%), Gaps = 106/586 (18%)

Query: 599  LALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLA 658
            L+L   + +V+ Y +  TLIVVP  L+  W+ +  +      L+  V+      +  +L 
Sbjct: 497  LSLELGISTVKPYAASTTLIVVPMSLLPQWRNEFVRVNDGNGLYCEVYYAGNVSNLRTLL 556

Query: 659  WDY----DVVITTFNRLSAEWGRRKK-------SPMMQVHWLRVMLDEGHTLGSSLNLTN 707
                    VV+TT+  +  EW + ++         +  V + R++LDEGH + +    T+
Sbjct: 557  VKQKSPPSVVLTTYGVVQTEWSKLQQFDYEASNEGLFSVEFFRIILDEGHNIRNRTTKTS 616

Query: 708  KLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFE 767
            K  MA  LT+  +W+LTGTP  N    +L  L  ++KF++ E + +    W   +  PFE
Sbjct: 617  KAVMA--LTSRRKWVLTGTPIMN----RLDDLFSLIKFMNFEPWCKID-YWRQFVSDPFE 669

Query: 768  AEMEEGRSRLLQLLHRCMISARKTDLQT------IPLCIKEVTF--LNFTEEHAGTYNEL 819
             +       ++Q +   ++  R  +++       + L  KEV    + F++  AG Y   
Sbjct: 670  KKDYSSALEVIQAVMGPILLRRTKNMKDEDGNPLVQLPPKEVVIEMIRFSDTEAGLYKYF 729

Query: 820  VVTVRRNILMADWNDPSHVESLLNPKQWKFRSTT---IRNLRLSCCVAGHIKVTDAGE-- 874
            +     ++           ESL      K  ST    I  LR  CC   H K+  + +  
Sbjct: 730  LSKAEHSV----------KESLARGDLLKKYSTILLHILRLRQVCC---HFKLLGSQDEN 776

Query: 875  -----------DIQETMDVLVENGLDPLSQEYAFIKY-----NLLNGGNCLRHILCLDCV 918
                       DI +   +L E+   P S       +           + L+ + C  C 
Sbjct: 777  DEDLKNMKLINDIPDISTLLGEDSQSPGSSSEGMPDFIEDFKTKYPNSDALKDLECSICT 836

Query: 919  --------AMDSEKCSLPGC--------GFLYEMQSPEI------------LTRPENPNP 950
                    ++   +C  P C         F  +  S  I            L + E+ N 
Sbjct: 837  CEAISPLTSVVFTRCGHPFCESCLLEYIQFQNKKGSETICPNCRAAVESRYLLKLEDING 896

Query: 951  KW-PVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQ 1009
            K  PVP         Y     ++  +    +  +L+   A  ++V++FSQF  ++ ++E 
Sbjct: 897  KLEPVP---------YSNTKKSSKIVALIRHLKHLQDTSA-NEQVVVFSQFSSYLDILEN 946

Query: 1010 QLTVAGI-------KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVT 1062
            +L  + +       KF G       SN +            + LL   +  +GL+L+  +
Sbjct: 947  ELRQSFVSDICEIYKFDGRLDLKERSNVLAKFTEKSLVKMKVLLLSLKAGGVGLNLTCAS 1006

Query: 1063 RVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              F+M+P W   ME+Q + R HR+G +  + +    +  ++EE+ML
Sbjct: 1007 HAFIMDPWWSPGMEDQAMDRIHRIGQSNTVKIYRFIVENSIEEKML 1052



 Score = 40.8 bits (94), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 7/97 (7%)

Query: 181 REWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTIT 240
           R+ + +V R   Y+ L  +    FY N  +G+ +     +     GG+  DE GLGKTI+
Sbjct: 410 RDTSWDVSRGTTYVSLEADIPDKFYANLHTGEFSLVKPISKSILKGGILADEMGLGKTIS 469

Query: 241 ALSLILKTQGTLADPPDGVKIIWCTHNGDPRCGYYDL 277
            L+LI          P   K +  T    P  G+  L
Sbjct: 470 ILALITMV-------PSDTKHLLTTAQEKPPVGHLSL 499


>gi|328707730|ref|XP_001950458.2| PREDICTED: hypothetical protein LOC100159378 [Acyrthosiphon pisum]
          Length = 1320

 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 132/536 (24%), Positives = 237/536 (44%), Gaps = 68/536 (12%)

Query: 612  LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP-SAHSLAWDYDVVITTFNR 670
            ++  TL+V P+ L++ W+T+++  + PG L +  +    +  SA  LA + D+VIT++N 
Sbjct: 779  INGGTLVVCPASLINQWETEVKTKLEPGLLKVVQYYGMNRDFSALELAKN-DLVITSYNI 837

Query: 671  LSAEWGRRKK---SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS---LTASNRWLLT 724
            +   W ++KK   SP+ ++ W R++LDEGH + +     +K Q +++   + + NRW +T
Sbjct: 838  VM--WDQKKKQNTSPLYRIKWDRIILDEGHNIRN-----HKTQTSVAVCNIKSLNRWAIT 890

Query: 725  GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRC 784
            GTP  N      +    +LKF+  + +  +   W   +    +A    G+ RL  L+   
Sbjct: 891  GTPIHNKE----ADFFTLLKFVRCKPFD-DWAVWKRWVSNNDDA----GKHRLSLLVKTL 941

Query: 785  MISARKTDL---QTIPLCIKEVTF--LNFTEEHAGTYNELVVTVRRNILMADWNDPSHVE 839
            M+   K++L    T  L  KE+    +  ++E    Y E ++    N+      D    E
Sbjct: 942  MLRRTKSELTQFTTFNLPKKEINTIEIELSKEERRAY-EKLLQFSSNLFATYLYDRVAKE 1000

Query: 840  SLLNPK---QWKFRSTTIRNLRLSCCVAGH---IKVTDAGEDIQE--TMDVLVE------ 885
             + +P    Q K +    +N         H   IK+    ++I E  T  +LV       
Sbjct: 1001 KVFDPNIEVQCKVQYFQEQNQDKDDVFKDHPELIKLFRQFKEINEIQTYHILVLLLRLRQ 1060

Query: 886  --------NGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQ 937
                     G  P+++E    + N+ +       +   D    +++  S P    L E+ 
Sbjct: 1061 ICCHPILIKG--PITEESIKKEDNIESIPEDDTDVFNNDSYNENTDIDSFPNNIDLSELM 1118

Query: 938  SPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPN--LESNKALPDKVI 995
            S   LT  + P  K PV    IE     + W +T      DL      +E NK   +K I
Sbjct: 1119 S--CLTLEDEPVKKKPV----IESNIFQKSWISTKIKTICDLVNQKVLIEGNK---EKAI 1169

Query: 996  IFSQFLEHIHVIEQQLTVAGIKFAGMYS---PMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            I SQ+   +++I + L   G     M+S   P+   NKI       +    + LL   + 
Sbjct: 1170 IVSQWPSFLYLIRKHLETTGNAKMEMFSGAIPIPKRNKIIREFNQPNSGPQILLLSLKAG 1229

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             +GL+L     +FL++  W+  +E Q   R +R+G T+P++V       T+E +++
Sbjct: 1230 GVGLNLMAANHMFLVDIHWNPQLEAQACDRVYRVGQTKPVYVYKFICSNTIETRIM 1285


>gi|116196848|ref|XP_001224236.1| hypothetical protein CHGG_05022 [Chaetomium globosum CBS 148.51]
 gi|88180935|gb|EAQ88403.1| hypothetical protein CHGG_05022 [Chaetomium globosum CBS 148.51]
          Length = 819

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 233/535 (43%), Gaps = 82/535 (15%)

Query: 588  DNLAFDLAALRLALCEPLDSVRLYLSR---ATLIVVPSYLVDHWKTQIQQHVRPGQL-HL 643
            D L+  + A  + L + L  + L ++    +TLIV P  ++ +W+ QI++HV    L  +
Sbjct: 320  DLLSGGILADDMGLGKTLQVISLIMTGGPGSTLIVAPVGVMSNWEQQIKRHVSEEHLPEV 379

Query: 644  FVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSL 703
             ++    + +A      + VVIT++  L+++       P+ ++ W R++LDEGHT+ ++ 
Sbjct: 380  LIYHGASRQTAAKSLNKFGVVITSYGTLTSD--TTIGGPLSKLDWRRIVLDEGHTIRNA- 436

Query: 704  NLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGIL 763
              T   + A  L A +R +LTGTP  N     +  L  ++KFLH     +    ++  I 
Sbjct: 437  -KTKAAEAACKLKAKSRLVLTGTPIVNN----IKDLHSLVKFLHITGGIEQSDIFNTVIA 491

Query: 764  RPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVT-FLNFTEEHAGTYNELVVT 822
            RP  A  E     LLQ L + +   R+ D++ + L +   T +++     AG        
Sbjct: 492  RPL-ALGETRAEALLQSLMKDVCLRRRKDMKFVDLKLPAKTEYIHRITFWAG-------- 542

Query: 823  VRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGED-IQETMD 881
                       +    E+LL    W      I +L       G + + D     +Q+ + 
Sbjct: 543  -----------EKKKYEALLC-NHWTLCKDRITDLMKLLEEEGTVLLNDENRALLQQALQ 590

Query: 882  VLVENGLDPLSQEYAFIKYNLLNG---GNCLRHILCLDCVAMDSE---KCSLPGCGFLYE 935
            +++E      SQE   +    L      +C +H  C  C++   E   KC  P C    E
Sbjct: 591  LIIE------SQEECPVCMEHLTDPVITHC-KHSFCRACISRVIEIQHKC--PMC--RAE 639

Query: 936  MQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVI 995
            +   +++     P P+     +   L P  +  S T   LK  + +  L+++ +   KVI
Sbjct: 640  LAEDKLV----EPAPEHSAEDEEESLDPETKS-SKTEALLK--ILQATLKNDGS---KVI 689

Query: 996  IFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLG 1055
            IFSQ+    +V          +    YS + ++     + M    + C         S+G
Sbjct: 690  IFSQWTSMKYV----------QTRCRYSRISTTTPATRI-MPASLSVC---------SVG 729

Query: 1056 LDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            L+L     V L +  W  ++E+Q + R HR+G TRP  V  L M GTVEE++L+ 
Sbjct: 730  LNLVSADTVVLADSWWAPAIEDQAVDRVHRLGQTRPTTVWRLVMEGTVEERVLDI 784


>gi|326912967|ref|XP_003202815.1| PREDICTED: transcription termination factor 2-like [Meleagris
            gallopavo]
          Length = 1176

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 131/570 (22%), Positives = 241/570 (42%), Gaps = 83/570 (14%)

Query: 585  KTLDNLAFDLAALRLALCEPLDSVRLYLSR---------ATLIVVPSYLVDHWKTQIQQH 635
            KTL  +A  L   ++   +    + ++LSR         +TLI+ P+ L+ HWK +I + 
Sbjct: 614  KTLTMIALILTQKQVKTEKGSKKLEMWLSRNDSTVIPSCSTLIICPASLIHHWKKEIDRR 673

Query: 636  VRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKK--------------- 680
            V  G+L ++++    +     +  ++DVV+TT++ +S E    K+               
Sbjct: 674  VGFGKLRVYLYHGPNRDKHAEVLSEHDVVVTTYSLVSKEVPTSKEEGEFPAEDHEVEWVT 733

Query: 681  --SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS---LTASNRWLLTGTPTPNTPNSQ 735
              SP+++V W RV+LDE HT+ +      K+Q +I+   L A+ RW +TGTP  N     
Sbjct: 734  PCSPLLRVAWARVILDEAHTIKNP-----KVQTSIAVCKLRATARWAVTGTPIQNN---- 784

Query: 736  LSHLQPMLKFLHEEAYGQNQKAW----DGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
            L  +  +L+FL    + +  K W    D    +  +      RS LL+     + S  K 
Sbjct: 785  LLDMYSLLRFLRCSPFDE-YKVWKYQVDNNTKKGGDRLSLLTRSLLLRRTKEQLDSTGKP 843

Query: 792  DLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS 851
             L ++P    ++  L  + E    YN L    R           S ++S L  ++ K   
Sbjct: 844  -LVSLPQRSMQLHQLKLSAEEQSVYNVLFARSR-----------STLQSYLKRQEQKNEG 891

Query: 852  TTIRNLRLSCCVAGHIKVTDAGEDIQETM-DVLVENGLDPLSQEYAFIKYNLLNGGNCLR 910
                        AG        +D   +  + L  +         A +   LL    C  
Sbjct: 892  REH---------AGSNPFERVAQDFGYSQKEFLASSQSASQVSSTAHVLSMLLRLRQCCC 942

Query: 911  HILCLDCVAMDSEKCSLPGCGFLYEMQ-SPEILTRPENPNPKWPV-------PQDLIELQ 962
            H+  L  VA+D    +  G     E Q S   L+  + P+ K  V         DL E+ 
Sbjct: 943  HLSLLK-VALDKVNLTSEGLSLSIEEQLSALTLSELQTPDSKTTVYLNGTAFNTDLFEIT 1001

Query: 963  PSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMY 1022
                + S+    LK     P  ES K+     ++ SQ+   + V+   L   G+K++ + 
Sbjct: 1002 KESTKVSHLLAELKTIQSHP--ESQKS-----VVVSQWTSMLKVVAVHLQRLGLKYSVVD 1054

Query: 1023 SPMHSSNKIKSLDMFRHDASCLALLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVI 1080
              ++   ++  ++ F ++     +++    +  +GL+L+    +FL++  W+ ++EEQ  
Sbjct: 1055 GSVNPKQRMDVVEEFNNNPKGPQVMLVSLLAGGVGLNLTGGNHLFLLDMHWNPALEEQAC 1114

Query: 1081 SRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             R +R+G  + + +      GTVEE++++ 
Sbjct: 1115 DRIYRVGQQKDVVIHRFVCEGTVEEKIVQL 1144


>gi|291398172|ref|XP_002715776.1| PREDICTED: transcription termination factor, RNA polymerase II
            [Oryctolagus cuniculus]
          Length = 1163

 Score = 99.8 bits (247), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 120/534 (22%), Positives = 226/534 (42%), Gaps = 77/534 (14%)

Query: 611  YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
            ++S  TLI+ P+ L+ HWK ++++ V+  +L ++++    +     +   YDVVITT++ 
Sbjct: 640  FVSHGTLIICPASLIHHWKNEVEKRVKSSRLRVYLYHGPNRNQHAKVLSTYDVVITTYSL 699

Query: 671  LSAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS 714
            ++ E   +K+               +P++ V W R++LDE H      N+ N ++Q +I+
Sbjct: 700  VAKEIPTKKQEGEVPGAQLSVEGISTPLLGVVWARIILDEAH------NVKNPRVQTSIA 753

Query: 715  ---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME 771
               L A  RW +TGTP  N     L  +  +LKFL    +  +   W   +    +   +
Sbjct: 754  VCKLKAHARWAVTGTPIQNN----LLDMYSLLKFLRCSPF-DDFNLWKSQV----DNGSK 804

Query: 772  EGRSRLLQLLHRCMISARKTD--------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTV 823
            +G  R L +L + ++  R  D        L T+P    ++  L  +E+    YN      
Sbjct: 805  KGGER-LSILTKSLLLRRTKDQLDSSGRPLVTLPQRKFQLHRLELSEDEETVYNVFFARS 863

Query: 824  RRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVL 883
            R  +        S+++   +      RS      R    VA     +  G  +       
Sbjct: 864  RSALQ-------SYLKRHESGSSLSGRSPDNPFSR----VAQEFGSSGPGSSM------- 905

Query: 884  VENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQ-SPEIL 942
                 D        I   LL    C  H+  L   A+D  +    G     E Q S   L
Sbjct: 906  ---AADSPRSSTVHILSQLLRLRQCCCHLSLLKS-ALDPTELKSEGLVLSLEEQLSALTL 961

Query: 943  TRPENPNPKWPVPQD----LIELQPSYRQWSNTNTFLKQ-DLYRPNLESNKALPDKVIIF 997
            +   +P P   V  +     +EL    R+ +   + L + +  R N +S K+     +I 
Sbjct: 962  SELHDPVPSPTVSLNGTCFKVELFEDTRESTKIASLLAELEAIRSNSKSQKS-----VIV 1016

Query: 998  SQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGL 1056
            SQ+   + V+   L   G+ +A +   ++   ++  ++ F   +    +L+   +  +GL
Sbjct: 1017 SQWTSMLKVVALHLKRHGLTYATIDGSVNPKQRMDLVEAFNRSSGPQVMLISLLAGGVGL 1076

Query: 1057 DLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +L+    +FL++  W+ S+E+Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1077 NLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQL 1130


>gi|393217661|gb|EJD03150.1| hypothetical protein FOMMEDRAFT_108290 [Fomitiporia mediterranea
            MF3/22]
          Length = 997

 Score = 99.8 bits (247), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 214/514 (41%), Gaps = 105/514 (20%)

Query: 589  NLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD 648
             L   L  L L L    D  + + SRATLIVVP  L+ +W+ QI++H  PG L   V+  
Sbjct: 294  GLGKTLTMLALVLATKSDVPKEF-SRATLIVVPLSLISNWEGQIKEHCAPGSLKYHVYYG 352

Query: 649  HKKPSAHSLAWDYDVVITTFNRLSAEWG------------RRKK--SPMMQVHWLRVMLD 694
              + ++      YDVVITT+  +  E              +R+K  S +  V W R++LD
Sbjct: 353  AGRSTSPDRLRKYDVVITTYQVVVGEHAGSGAARNDSGSSKRQKTGSGLFGVQWKRIVLD 412

Query: 695  EGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNTP---NSQLSHLQPMLKFLHEEA 750
            EGHT+    N   K+  A+ +L A  RW++TGTP  N+P    S LS LQ + K L  E 
Sbjct: 413  EGHTI---RNPRTKMAQAVCALEAQRRWVVTGTPIINSPRDLGSILSFLQ-ICKPLDSED 468

Query: 751  YGQNQKAWDGGILRPFEAEMEEG----RSRLLQLLHRCMISARKTD-LQTIPL-CIKEVT 804
            +      +   +LRP +  M EG    R+ + Q+  R     R +D  Q +PL  ++ VT
Sbjct: 469  F------FKRLLLRPLKDGMAEGYQLLRALMSQICLRRTKEMRGSDGKQLVPLPGVEMVT 522

Query: 805  F-LNFTEEHAGTYN---ELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLS 860
              +       G Y+   EL     +N++  +    +H   L          + +  LR  
Sbjct: 523  IPVKLDPSTRGLYDTIEELSKQKFQNLMDREDGRTAHTSIL----------SMLTRLRQV 572

Query: 861  CCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAM 920
                G I V     D  E M    +N +D   Q+    K   +     LR    L  +  
Sbjct: 573  VLHPGLIPV-----DYVEQM----QNSIDDDEQDIKPGKLVKVTPELKLRLQAILAQMIE 623

Query: 921  DSEKC----------SLPGCGFLYEMQ-SPEILTRPENPNPKWPVPQ------DLIELQP 963
            DSE+C           + GC   + ++   EI+TR    + + P+ +      DL+E  P
Sbjct: 624  DSEECPICFEVLNDPRITGCSHAFCLECVTEIITR----DARCPMDRRQITMADLVEPAP 679

Query: 964  SYRQWSNTNTFLKQDLYRPNLESNKAL--------------------PDKVIIFSQFLEH 1003
                   T  F K++    N   N AL                     +K ++FSQF   
Sbjct: 680  PSEL---TQVFPKKE---SNYGENNALRSESSAKIEQLVHLLQLTPSNEKSLVFSQFTSF 733

Query: 1004 IHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF 1037
            +  IE  L  AGI F      M + ++ + L++F
Sbjct: 734  LDKIEVALNEAGISFVRFDGKMSAKSRQEVLEVF 767



 Score = 56.6 bits (135), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + SLGL+L+    V+LM+P W   +E Q I R +R+G T+ +HV  L    TVE ++L+ 
Sbjct: 878  AGSLGLNLTVANNVYLMDPWWQEGIESQAIDRCNRIGQTKMVHVYQLIAENTVESKVLDI 937

Query: 1111 LQDTDRCRRLLKE 1123
                +R ++L+ E
Sbjct: 938  ---QERKKKLISE 947


>gi|302819150|ref|XP_002991246.1| hypothetical protein SELMODRAFT_429595 [Selaginella moellendorffii]
 gi|300140957|gb|EFJ07674.1| hypothetical protein SELMODRAFT_429595 [Selaginella moellendorffii]
          Length = 1551

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 118/549 (21%), Positives = 215/549 (39%), Gaps = 117/549 (21%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPG---QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
             TL+V P+ ++  W  +I++ V        H++   + K+   + LA  YDVV+TT++ +
Sbjct: 610  GTLVVCPTSVLRQWYHEIEEKVTAAARLSTHIYHGGNRKR-CPYELA-KYDVVLTTYSIV 667

Query: 672  S-----------------AEWGR-----------------RKKSPMMQVHWLRVMLDEGH 697
            +                 A++G                  R   P+ +V W RV+LDE  
Sbjct: 668  TNEVPKPDEEIEADEETYADYGSSCSQAFSNKKTKKRTPTRGAGPLAEVKWFRVVLDEAQ 727

Query: 698  TLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKA 757
            T+ ++  L         L A  RW L+GTP  NT +   S+ +  L+F   ++Y      
Sbjct: 728  TIKNAKTLA--AYACWGLKAERRWCLSGTPLQNTIDDLFSYFR-FLRFDPLDSY----ST 780

Query: 758  WDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYN 817
            +   +  P   +   G ++L  +L                         +F++E    Y+
Sbjct: 781  FKIKVKEPISRDPSTGYAKLQMILQ-----------------------ADFSKEEREFYD 817

Query: 818  ELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHI------KVTD 871
             L    R           S+       K +      +  LR +CC    +      K+ D
Sbjct: 818  SLEQRSRDKFQ-------SYQRRGTVQKNYANIMVLLLRLRQACCHRSLVPEDKESKIED 870

Query: 872  AGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVA---MDSE----K 924
               +I    +V +    +  + E  F+        +C  H+ C  C++   + SE    K
Sbjct: 871  EESNIDAKENVSICTICED-APEQPFL--------SCCGHVFCSQCISEKLLTSEELAVK 921

Query: 925  CSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQ----DLY 980
            C  PGC    E                       ++    Y   S  N  +++     + 
Sbjct: 922  CPAPGCSCTLESSLLSSFM--------------SLDSNGGYESSSKINAVMERLMNLPVT 967

Query: 981  RPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHD 1040
             P     KA+ +K ++FSQ+   + ++E +L  AG++F  +   M    +  ++  F   
Sbjct: 968  SPAAAGKKAVTEKALVFSQWTSLLDLVEPRLEKAGLEFRRLDGTMSVMERDAAVCEFNEK 1027

Query: 1041 ASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAM 1099
                 +LM     SLGL++     V L++  W+ ++E+Q I RAHR+G TR +HV    +
Sbjct: 1028 PEVSVMLMGLKVGSLGLNMVAACHVLLLDVWWNPTVEDQAIDRAHRIGQTRDVHVTRFTV 1087

Query: 1100 RGTVEEQML 1108
            + T+E+++L
Sbjct: 1088 KKTIEDRIL 1096


>gi|322696102|gb|EFY87899.1| DNA repair protein RAD16 [Metarhizium acridum CQMa 102]
          Length = 1097

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 151/629 (24%), Positives = 266/629 (42%), Gaps = 112/629 (17%)

Query: 548  PILGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDS 607
            PIL +  A + Q   +  + F L     +G+  W            L    + L + + +
Sbjct: 477  PILKAGMAPQPQSISRQLKPFQL-----EGLA-WMKEMEKREWKGGLLGDEMGLGKTIQA 530

Query: 608  VRLYLS-----RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD-- 660
            V L +S     + +L++VP   +  W+++I+ +   G L  FV+    + +    A +  
Sbjct: 531  VSLIMSDYPAKQPSLVLVPPVALMQWQSEIKSYT-DGTLKTFVFHGTNQKAKTITAKELK 589

Query: 661  -YDVVITTFNRLSAEWGR------------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTN 707
             YDV++ ++N L + + +            ++KS +  +H+ R +LDE H++ +   +T 
Sbjct: 590  TYDVIMMSYNSLESMYRKQEKGFKRKNGIHKEKSVIHSIHFHRAILDEAHSIKTRTTMTA 649

Query: 708  KLQMAISLTASNRWLLTGTPTPNTPNSQLS-----HLQPMLKFLHEE------------- 749
            K   A+  T   RW LTGTP  N      S     +++P   +L ++             
Sbjct: 650  KACFALQTTY--RWCLTGTPLQNRIGELFSLIRFLNIRPFALYLCKQCPCSTLEWAMDED 707

Query: 750  --------AYGQNQKAWDGGILRPFE--AEMEEGRS--RLLQLL-HRCMISARKTD-LQT 795
                    A  Q+   ++  +L P +    +  GR   R L+L+  R M+   K D   +
Sbjct: 708  SRCSHCNHAGMQHVSVFNQELLNPIQKFGNLGPGREAFRKLRLMTERIMLRRLKKDHTNS 767

Query: 796  IPLCIKEVTFLN--FTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTT 853
            + L +KE+      F EE     N ++   +RN    D      V  LLN     F    
Sbjct: 768  MELPVKEIYVERQFFGEEENDFANSIMTNGQRNF---DTYVAQGV--LLNNYANIF--GL 820

Query: 854  IRNLRLSCCVAGH-----IKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNC 908
            I  +R    VA H      K  D G++I      L+ +  D  +++    +         
Sbjct: 821  IMQMRQ---VADHPDLILKKNADGGQNI------LICSICDEPAEDTIRSR--------- 862

Query: 909  LRHILCLDCVA-----MDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQP 963
             +H  C  CV+      DS  C  P C     +     L +PE    +  V ++ I  + 
Sbjct: 863  CKHDFCRACVSSYIGSTDSPDC--PRCHIPLSID----LEQPEIEQDENLVKKNSIINRI 916

Query: 964  SYRQWSNTNT--FLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGM 1021
                W++++    L  +L++  L S+ A   K IIFSQF   + +IE +L  AGI    +
Sbjct: 917  KMENWTSSSKIELLVHELHK--LRSDNA-SHKSIIFSQFTTMLQLIEWRLRRAGITTVML 973

Query: 1022 YSPMHSSNKIKSLDMFRH--DASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQV 1079
               M  S +  S++ F +  D  C  L+   +  + L+L+  +RVF+++P W+ + E Q 
Sbjct: 974  DGSMTPSQRQASIEHFMNNVDVECF-LVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQS 1032

Query: 1080 ISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              R HR+G TRP  +  L +  +VE +M+
Sbjct: 1033 ADRCHRIGQTRPCTITRLCIEDSVESRMV 1061


>gi|242023012|ref|XP_002431930.1| helicase, putative [Pediculus humanus corporis]
 gi|212517281|gb|EEB19192.1| helicase, putative [Pediculus humanus corporis]
          Length = 882

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 137/574 (23%), Positives = 246/574 (42%), Gaps = 106/574 (18%)

Query: 605  LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP---SAHSLAWDY 661
            ++ V++Y  + TL+V PS L+  W+ QI+QH R  +L   V   H KP    A  LA  Y
Sbjct: 370  VNDVKMYYGK-TLVVCPSSLMGQWQGQIKQHCRSQKLSYLVH--HGKPRELQAKRLAV-Y 425

Query: 662  DVVITTFNRLSAE---WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
            DVVIT++  ++ E       KK  + +V W R+++DEGH + +  + T K Q    L A 
Sbjct: 426  DVVITSYGVIAEENKIIKDNKKGALFRVVWKRIIIDEGHVIRN--HKTKKAQALCELEAK 483

Query: 719  NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL 778
            +RW LTGTP  N      S    +LKFL    +  N   W     R  + +   G  RL 
Sbjct: 484  HRWCLTGTPVHNKELDMYS----LLKFLRCSPF-DNINVWK----RWVDNKSANGVKRLN 534

Query: 779  QLLHRCMISARKTDLQTI----PLCIKEV--TFLNFTEEHAGTYNE------------LV 820
             ++   ++   K DL+ I     L +K +   ++   EE    Y+             ++
Sbjct: 535  TVVKSILLRRTKEDLKNIGELRELPVKNIIPIYIKLDEEEQKVYHTVLNFSKSLLADFIM 594

Query: 821  VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLS--CCVAGHI-------KVTD 871
               R+N  ++D     H + L +  + K     +  LRL   CC+ G I          +
Sbjct: 595  QAQRKNGFVSDELKNQHHKLLSSANEIKTTEIFVLLLRLRQICCLPGLIHSMLEKDSCAE 654

Query: 872  AGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCG 931
             G DI++          DP+ Q+                       +    ++ S+   G
Sbjct: 655  DGIDIED----------DPILQD-----------------------LTSQMKRMSVVSSG 681

Query: 932  F-LYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKAL 990
            + + E++  + +    NP         + E+    R  +   T +K  L    LE++   
Sbjct: 682  YGVKEVEKRQKILVKGNP---------VFEIN---RLSTKIKTVVK--LVEEALEAD--- 724

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG 1050
             DK+II SQ+   +  ++  +         +   +    + K +D F +  + + +++  
Sbjct: 725  -DKIIIVSQWAGLLQKLKTHILSLKTGVVTLDGSVPVKFRPKIIDDFNNPKTGIKVMLLS 783

Query: 1051 --SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +  +GL+L    R+ ++EP W+  +E Q   R +R+G  +P++V  +  + T+EE+ +
Sbjct: 784  LTAGGVGLNLVGGNRLVIIEPHWNPQLESQACDRIYRVGQKKPVYVYKIICQETIEER-I 842

Query: 1109 EFLQDTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
            E LQ   + +  + E ++K E    ++  TL D 
Sbjct: 843  ELLQ---KKKLEVAETVLKGELTLNKNKMTLADL 873


>gi|410897571|ref|XP_003962272.1| PREDICTED: transcription termination factor 2-like [Takifugu
            rubripes]
          Length = 703

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 121/524 (23%), Positives = 224/524 (42%), Gaps = 83/524 (15%)

Query: 610  LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW-TDHKKPSAHSLAWDYDVVITTF 668
            L  S+ATLI+ P+Y++ HWK +I +HVR  +L ++++   +++ SA +LA DYDVV+TT+
Sbjct: 222  LVASKATLIICPTYVIHHWKREIDRHVRSSKLSVYLYHGPNREKSARALA-DYDVVVTTY 280

Query: 669  NRLSAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI 713
            + +S E   +K+               S +++V W RV+LDE H +    N   K  +A 
Sbjct: 281  SLVSKEIPVQKEEAEKPNKDDVAPPSSSALLRVAWERVVLDEAHNIK---NPKAKTSVAT 337

Query: 714  -SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEE 772
              L A  RW +TGTP  N     L  +  +LKFL    + +  K W   +    +     
Sbjct: 338  CQLKAHARWAVTGTPIQNN----LLDMYSLLKFLRCSPFDEF-KLWKAQV----DNGSRR 388

Query: 773  GRSRLLQLLHRCMISARKTD--------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
            GR R L +L R ++  R  D        L T+P    EV  L  +++    Y ++V    
Sbjct: 389  GRER-LNILTRNLLLRRTKDELDAAGSPLVTLPDRTCEVHRLKLSQDEKAVY-DVVFAQS 446

Query: 825  RNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLV 884
            R+ L            L   +Q         +      VA    ++  G     +     
Sbjct: 447  RSTLQ---------NYLKRHEQKDVNKGNPSSSNPFSSVAQEFGLSQTGSAASGSQQ--- 494

Query: 885  ENGLDPLSQEYAFIKYNL-LNGGNCLRHIL----CLDCVAMDSEKCSLPGCGFLYEMQSP 939
                    Q+ +  K NL +    C  H+      LD   ++ ++  +P      +  + 
Sbjct: 495  -------PQQASSTKDNLSVRLRQCCCHLSLLKETLDPSELNGDEIVVP---LEEQFNAL 544

Query: 940  EILTRPENPNPKWPV-------PQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD 992
             + + P    PK  V       P +L E      + S   + LK+   R N    K+   
Sbjct: 545  SLTSSPSQAGPKDTVALNGTQFPSELFEETSESTKISAILSELKK--IRENDSDQKS--- 599

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-- 1050
              +I SQ+   + ++   L   G+++  +   ++   ++  ++ F  ++    +++    
Sbjct: 600  --VIVSQWTSMLRIVAVHLRRIGLRYGIIDGTVNPKQRMDLVEEFNTNSKGPQVMLVSLC 657

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
            +  +GL+L     +FL++  W+ ++E+Q   R +R+G T+ + +
Sbjct: 658  AGGVGLNLIGGNHLFLIDMHWNPALEDQACDRIYRVGQTKDVTI 701


>gi|302308737|ref|NP_985767.2| AFR220Wp [Ashbya gossypii ATCC 10895]
 gi|442570005|sp|Q753V5.2|RAD5_ASHGO RecName: Full=DNA repair protein RAD5
 gi|299790770|gb|AAS53591.2| AFR220Wp [Ashbya gossypii ATCC 10895]
          Length = 1085

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 130/586 (22%), Positives = 234/586 (39%), Gaps = 106/586 (18%)

Query: 599  LALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLA 658
            L+L   + +V+ Y +  TLIVVP  L+  W+ +  +      L+  V+      +  +L 
Sbjct: 497  LSLELGISTVKPYTASTTLIVVPMSLLPQWRNEFVRVNDGNGLYCEVYYAGNVSNLRTLL 556

Query: 659  WDY----DVVITTFNRLSAEWGRRKK-------SPMMQVHWLRVMLDEGHTLGSSLNLTN 707
                    VV+TT+  +  EW + ++         +  V + R++LDEGH + +    T+
Sbjct: 557  VKQKSPPSVVLTTYGVVQTEWSKLQQFDYEASNEGLFSVEFFRIILDEGHNIRNRTTKTS 616

Query: 708  KLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFE 767
            K  MA  LT+  +W+LTGTP  N    +L  L  ++KF++ E + +    W   +  PFE
Sbjct: 617  KAVMA--LTSRRKWVLTGTPIMN----RLDDLFSLIKFMNFEPWCKID-YWRQFVSDPFE 669

Query: 768  AEMEEGRSRLLQLLHRCMISARKTDLQT------IPLCIKEVTF--LNFTEEHAGTYNEL 819
             +       ++Q +   ++  R  +++       + L  KEV    + F++  AG Y   
Sbjct: 670  KKDYSSALEVIQAVMGPILLRRTKNMKDEDGNPLVQLPPKEVVIEMIRFSDTEAGLYKYF 729

Query: 820  VVTVRRNILMADWNDPSHVESLLNPKQWKFRSTT---IRNLRLSCCVAGHIKVTDAGE-- 874
            +     ++           ESL      K  ST    I  LR  CC   H K+  + +  
Sbjct: 730  LSKAEHSV----------KESLARGDLLKKYSTILLHILRLRQVCC---HFKLLGSQDEN 776

Query: 875  -----------DIQETMDVLVENGLDPLSQEYAFIKY-----NLLNGGNCLRHILCLDCV 918
                       DI +   +L E+   P S       +           + L+ + C  C 
Sbjct: 777  DEDLKNMKLINDIPDISTLLGEDSQSPGSSSEGMPDFIEDFKTKYPNSDALKDLECSICT 836

Query: 919  --------AMDSEKCSLPGC--------GFLYEMQSPEI------------LTRPENPNP 950
                    ++   +C  P C         F  +  S  I            L + E+ N 
Sbjct: 837  CEAISPLTSVVFTRCGHPFCESCLLEYIQFQNKKGSETICPNCRAAVESRYLLKLEDING 896

Query: 951  KW-PVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQ 1009
            K  PVP         Y     ++  +    +  +L+   A  ++V++FSQF  ++ ++E 
Sbjct: 897  KLEPVP---------YSNTKKSSKIVALIRHLKHLQDTSA-NEQVVVFSQFSSYLDILEN 946

Query: 1010 QLTVAG-------IKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVT 1062
            +L  +         KF G       SN +            + LL   +  +GL+L+  +
Sbjct: 947  ELRQSFASDICEIYKFDGRLDLKERSNVLAKFTEKSLVKMKVLLLSLKAGGVGLNLTCAS 1006

Query: 1063 RVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              F+M+P W   ME+Q + R HR+G +  + +    +  ++EE+ML
Sbjct: 1007 HAFIMDPWWSPGMEDQAMDRIHRIGQSNTVKIYRFIVENSIEEKML 1052



 Score = 40.8 bits (94), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 7/97 (7%)

Query: 181 REWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTIT 240
           R+ + +V R   Y+ L  +    FY N  +G+ +     +     GG+  DE GLGKTI+
Sbjct: 410 RDTSWDVSRGTTYVSLEADIPDKFYANLHTGEFSLVKPISKSILKGGILADEMGLGKTIS 469

Query: 241 ALSLILKTQGTLADPPDGVKIIWCTHNGDPRCGYYDL 277
            L+LI          P   K +  T    P  G+  L
Sbjct: 470 ILALITMV-------PSDTKHLLTTAQEKPPVGHLSL 499


>gi|449016605|dbj|BAM80007.1| similar to DNA repair protein rad16 [Cyanidioschyzon merolae strain
            10D]
          Length = 973

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 124/541 (22%), Positives = 218/541 (40%), Gaps = 65/541 (12%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            S ATL+V P  L+  W  +I++    G    + V+    +          D+V+TT+  L
Sbjct: 419  SPATLVVCPLSLLRQWSQEIRKSTVQGLGPSVVVYHGSNRADLRPQLGCADIVLTTYAVL 478

Query: 672  SAEWGR---------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLT-ASNRW 721
             AE  +         R   P+ Q  W RV+LDE H +    N+ +++  +  L  A +RW
Sbjct: 479  CAESPQLSPEKEQILRSAGPLFQYRWYRVILDEAHNI---RNVNSRVSRSACLVEARSRW 535

Query: 722  LLTGTPTPNTPNSQLSHLQPMLKFLHE------EAYGQNQKAWDGGILRPFEAEMEEGRS 775
             LTGTP  N  +  L+    +L FL        +AY +   +  G        E      
Sbjct: 536  CLTGTPVQNNVHDVLA----LLLFLRHPACSSMKAYSRILSSVSGTADNVDHTEAAGSLG 591

Query: 776  RLL--QLLHRCMISARKTDLQTIPLCIKE-----VTFLNFTEEHAGTYNELVVTVRRNIL 828
            RLL   LL RC    R   +   P+   E     V +++F+      Y E + +V R +L
Sbjct: 592  RLLCPVLLRRC----RDDTVNGRPILELEPRHDTVEYVDFSPAERHLY-ECMESVGRELL 646

Query: 829  MADWNDPSHVESLLNP-----------KQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQ 877
                 + ++  S +N              +    + +  LR + C A      D+    Q
Sbjct: 647  RDLSTNDANPSSFVNTFVLITRLRQICDHYTLLKSYVERLRTAPCTA------DSSMQEQ 700

Query: 878  ETMDVLVENGLDPLSQEYAFIKYNLLNGGNC-----LRHILCLDCVAMDSEKCSLPGCGF 932
            +    +++    P     A    ++     C     +    C +  A   +    P    
Sbjct: 701  QARSAVLQGPDAPDRGAVASGSGHVEIDSMCDAPAQVPDASCTEAAACVQDNGHAPRAWH 760

Query: 933  LYEMQSPEILTRP---ENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKA 989
              +  +PE   R    E     W      I L+ S     ++++ L+  +   +    +A
Sbjct: 761  QRDASAPETARRATLLEALIRAWTA----IALRDSTHDGGSSSSKLRTLMALLDQGRIQA 816

Query: 990  LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
              +K I+FSQ+   + + E  LT  G     +   M    +  +L +F+     + L+  
Sbjct: 817  PTEKWIVFSQWPSFLDICEDVLTARGQAVCRLDGSMRPEERELNLSLFKRPEYPILLMSL 876

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            G+  +GL+L+    V L++P W+ ++EEQ I R +R+G  R + V  L +R TVEE++++
Sbjct: 877  GAGGVGLNLTEANHVVLVDPWWNPAVEEQAIHRVYRLGQKRSVQVIRLVVRDTVEERVMQ 936

Query: 1110 F 1110
             
Sbjct: 937  L 937


>gi|328698504|ref|XP_001947753.2| PREDICTED: transcription termination factor 2-like [Acyrthosiphon
            pisum]
          Length = 807

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 229/522 (43%), Gaps = 48/522 (9%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD-HKKPSAHSLAWDYDVVITTFNRLSA 673
             TLI+ P  L++ WKT+++  ++PG L +  +   ++  SA  LA + D+VIT++  +  
Sbjct: 274  GTLIICPVSLINQWKTEVKTKIKPGLLQVSQYYGINRSFSALELAKN-DLVITSYRVVMW 332

Query: 674  EWG-RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNT 731
            +   RR  SP+ ++ W R++LDEGH +    N   K  +A+ ++ + NRW++TGTP  N 
Sbjct: 333  DHKIRRNTSPLYKIKWNRIILDEGHNIR---NHKAKTSVAVCNIKSLNRWVITGTPIHNK 389

Query: 732  PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
                 +    +LKFL  + +  +   W+  I    +A    G+  L  L+   M+   K+
Sbjct: 390  E----ADFFTLLKFLRCKPFD-DWSVWERWIGNNDDA----GKHTLFLLVKTLMLRRTKS 440

Query: 792  DL---QTIPLCIKEVTF--LNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPK- 845
            +L    T  L IKE+    +  ++E    Y +L +    N+     N+ +  E  ++P  
Sbjct: 441  ELTQFTTFSLPIKEIYTIEIELSKEERHAYEKL-LQFSSNLFATYLNERAAKEKKIDPSI 499

Query: 846  --QWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLL 903
              Q K +    +N         H +  ++ +      D+   + L  L +      + LL
Sbjct: 500  KVQHKIQYFQEQNQDTDEVFKDHPEFLESFKQFNNIEDIQTYHILVLLLRLRQICCHPLL 559

Query: 904  NGG-----NCLRHILCLDCVAMDSEKCS-------LPGCGFLYEMQSPEILTRPENPNPK 951
              G     N +  IL  D    +++  +        P    L ++ S   LT  + P  K
Sbjct: 560  IKGPITEENDMESILDDDSDVTNNDSYNENTDIDIFPNNNDLSDLMS--CLTLEDEPVKK 617

Query: 952  WPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQL 1011
              V    I  Q S   W +T      DL    +  N    +K II SQ+   +++I + L
Sbjct: 618  KHVNDSNI-FQKS---WISTKIKKICDLVNQKV-LNGGNREKAIIVSQWTSFLYLIHKHL 672

Query: 1012 TVAGIK---FAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLME 1068
                 K   F+G   P+   NKI       +    + LL   S  +GL+L     +FL++
Sbjct: 673  VYYNAKMEMFSGAI-PIPKRNKIIREFNDPNGGPQILLLSLKSGCVGLNLMAANHMFLVD 731

Query: 1069 PIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              W+  +E Q   R +R+G T+P+++       T+E ++L  
Sbjct: 732  NHWNPQLEAQACDRIYRIGQTKPVYIYKFICSNTIETRILNI 773


>gi|389751354|gb|EIM92427.1| hypothetical protein STEHIDRAFT_46096 [Stereum hirsutum FP-91666 SS1]
          Length = 1113

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 136/579 (23%), Positives = 241/579 (41%), Gaps = 91/579 (15%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD-----VVITTFN 669
            ATLIV P+ L++ W  ++++  +PG +   VW    +    ++    D     VVIT++ 
Sbjct: 528  ATLIVAPTSLLNQWAEELERCSKPGTVKTLVWHGQNRLDLDTVIEAEDEGTANVVITSYG 587

Query: 670  RLSAEWGRRKK-----SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLL 723
             L +E  +  K     SP+    WLR++LDE H   S    T+K   A+ +L A  RW +
Sbjct: 588  VLVSEHSKVDKSGKLTSPIFTGEWLRIVLDEAHHCKSR---TSKAAKAVFALEARRRWAV 644

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTP  N    ++  L  +LKFL+   +  +   +   I  PF A   +    +  +L  
Sbjct: 645  TGTPIVN----RVEDLFSLLKFLNFAPWS-DYAFFRSFITLPFLAHDPKAIEVVQVILES 699

Query: 784  CMISARKT-----DLQTIPLCIKEVTF--LNFTEEHAGTYNELVVTVRRNILMAD----- 831
             ++   KT       + + L  KE+T   L+F++     Y+ +  + +++          
Sbjct: 700  VLLRREKTFRDSDGNRIVELPPKEITVDTLSFSKSERDIYDSIYHSAKKDFEQLRVKGLV 759

Query: 832  WNDPSHVESLLNPKQWKFRSTTIR-NLRLS-------CCVAGHIKVTDAGEDIQETMDVL 883
              + SH+ ++L     + R   +  +L LS          +G + V    E   ++    
Sbjct: 760  GKNYSHILAML----MRLRRAVLHPSLVLSDDDEENQPTASGPVDVDSMIEKFTQSTSDS 815

Query: 884  VENGLDPLSQEYAF---IKYNLLNGGN------CL------------RHILCLDCVA--- 919
              +   P +    F   +  NL N G       C+             H  C DCVA   
Sbjct: 816  KGDESTPAAPGNTFAEGVLNNLSNNGEEAECPLCMDVMDHPMMFPECMHQCCKDCVAGYF 875

Query: 920  ----MDSEKCSLPGC--GFLYEMQSPEILTRPE-------NPNPKWPVPQDLIELQPSYR 966
                   +    P C  G + E    E+  RP         P+ +  VP D+I  +  +R
Sbjct: 876  ETSLAKGDSVCCPSCNRGPVKEKDMLEVF-RPRKAKVTVSQPSSQVSVP-DVIIRRNDFR 933

Query: 967  QWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMH 1026
              +  +  L Q+L R  L+       + ++FSQF   + +I   L    I F      M 
Sbjct: 934  SSTKLDALL-QNLRR--LQDQDPC-FRAVVFSQFTSFLDLIGTALEREHITFCRFDGTMD 989

Query: 1027 SSNKIKSLDMFRHDASCLALLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAH 1084
               K  ++  F+  +    +L+    +  +GL+L+    VF+M+  W+ ++E Q I R H
Sbjct: 990  MKKKSAAVAEFKAPSRRPKVLIISLKAGGVGLNLTTANHVFMMDCWWNAAIENQAIDRVH 1049

Query: 1085 RMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKE 1123
            R+G  + ++V    +  T+E ++L+  +   R   L+KE
Sbjct: 1050 RIGQEKTVYVTHFIVEDTIEGRILQIQK---RKTALVKE 1085


>gi|145477881|ref|XP_001424963.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392030|emb|CAK57565.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1215

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 211/461 (45%), Gaps = 62/461 (13%)

Query: 678  RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLS 737
            + ++ + ++++ RV+LDE H + +   L  +   AISL +  RW LTGTP  N  +   S
Sbjct: 751  KNENNLFKLNYYRVILDEAHNIKTRSTLQTR--SAISLQSQFRWCLTGTPMQNKHDDLFS 808

Query: 738  HLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGR--SRLLQ--LLHRCMISARKTDL 793
                +L+FL  E + +    W    +   E E ++ R  +++LQ  +L R   S +   L
Sbjct: 809  ----LLQFLQVETFSE--YFWWNTYINKEENEDDQQRILAQILQPIILRRTKNSQQFEGL 862

Query: 794  QTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTT 853
            Q +   I+ + ++   ++    Y +L+ +  +N+  +   + S+ +S ++  Q       
Sbjct: 863  QQV---IENIHWVELDQKERMLYKKLL-SGSQNLFKSFVKNTSN-QSYVHIFQ------I 911

Query: 854  IRNLRLSCCVAGHIKVTDAGEDIQET-----MDVL-------VENGLDPLSQEYAFIKYN 901
            I  LR++C    H ++     ++Q+T     +D +         NG + +++EY   K N
Sbjct: 912  INKLRVAC---NHPQLALKDINLQQTPLEKVLDKIDKFFMEKTHNG-NKITEEY---KQN 964

Query: 902  LLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLY--EMQSPEILTRPENPNPKWPVP-QDL 958
            L+          CL C        SL  CG +Y  E     ++     P+ +  +  QDL
Sbjct: 965  LIENIKNGSITECLICTKSQISVFSLSSCGHIYCKECFGETVVKLKNCPSCRTKLTIQDL 1024

Query: 959  IELQPSYRQWSNTNTFLKQDLYRPNLESN-----------KALPDKVIIFSQFLEHIHVI 1007
            I++        N N F +    +  L S            K   +KV+IF+Q++E I ++
Sbjct: 1025 IDVVVE-----NENVFEELQSLQFGLSSKLEAVIKETKVIKQKKEKVLIFTQWIEMIGLL 1079

Query: 1008 EQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVFL 1066
            E Q   +GI    +   M    + K +  F+      AL++   A S GL+L+  + VFL
Sbjct: 1080 ENQFKDSGIIAYRITGSMTVDKREKIIKNFKEQQDVTALILSLRATSTGLNLTMASNVFL 1139

Query: 1067 MEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            ++P W+ ++E+Q I RA R+G    + V     R T+E+Q+
Sbjct: 1140 VDPWWNPAIEDQAIGRADRIGQQNQVKVVRFLCRNTIEQQI 1180



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 12/109 (11%)

Query: 166 KLFPHQQAAVEWMLHRE-------WNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTA 218
           +L  HQ+ A+ WML RE        + +    PL+  L   +G   YVNT +G I+    
Sbjct: 481 QLKQHQKQALYWMLLREGHIIDQTQDQKQKLSPLWQQLKLLNGDTIYVNTFTGKISKEFI 540

Query: 219 PTMRDFHGGMFCDEPGLGKTITALSLILKT----QGTLADPPDGVKIIW 263
           P +++  GG+  DE GLGKTI AL+LIL+T    Q TL   P  V + W
Sbjct: 541 P-VQETKGGILADEMGLGKTIMALALILETHKKGQQTLIVVPKSVLLQW 588



 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 37/63 (58%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           + TLIVVP  ++  W+ +IQ H +P  L + V+   +  S      DYD+++TT+  L++
Sbjct: 574 QQTLIVVPKSVLLQWEKEIQTHSKPRSLQVLVYYKQQSRSQKIKLKDYDIILTTYAILAS 633

Query: 674 EWG 676
           ++ 
Sbjct: 634 DYS 636


>gi|444724540|gb|ELW65142.1| Helicase-like transcription factor [Tupaia chinensis]
          Length = 929

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 118/479 (24%), Positives = 204/479 (42%), Gaps = 72/479 (15%)

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            + W  +  SP+  + WLRV+LDEGH + +      + +  + L    RW+LTGTP  N+ 
Sbjct: 457  SNWITKGDSPLHSIRWLRVILDEGHAIRNPN--AQQTKAVLDLETERRWVLTGTPIQNS- 513

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL-----LHRCMIS 787
               L  L  +L FL  + +  +++ W   I RP     E G  RL  L     L R   S
Sbjct: 514  ---LKDLWSLLSFLKLKPF-LDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTS 569

Query: 788  A-----------RKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRR----NILMADW 832
                        RK  +Q I L  +E       E +    NE   T+ R      ++A +
Sbjct: 570  KIKGKPVLELPERKVFIQHIILSDEE------REIYQSVKNEGRATIGRYFNEGTVLAHY 623

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLS 892
             D   +  LL  +Q    +  + ++  S   +G+    +  + +   M +++ +G D   
Sbjct: 624  ADVLGL--LLRLRQICCHTHLLTDVVSSSGPSGNDTPEELQKKLIRKMKLILSSGSD--- 678

Query: 893  QEYAFIKYNLLNG--GNCLRHILCLDCV--AMDSEK--CSLPGC------GFLYEMQSPE 940
            +E A    +L      +C  H+ C  C+   + SE+     P C        L E    E
Sbjct: 679  EECAICLDSLTVPVITHCA-HVFCKPCICQVIQSEQPHAKCPLCRKDINEDNLLECPPEE 737

Query: 941  ILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQF 1000
            +    E  + +W     +  L  +       N         PN++S        ++ SQF
Sbjct: 738  LARDNERSDIEWTASSKINALMHALIDLRKKN---------PNIKS--------LVVSQF 780

Query: 1001 LEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMDGSASLGLD 1057
               + +IE  L  +G  F  +   M    +++S+  F++  +    + LL   +  +GL+
Sbjct: 781  TTFLSLIEIPLRSSGFIFTRLDGSMAQKKRVESIQSFQNTEAGSPTIMLLSLKAGGVGLN 840

Query: 1058 LSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ +Q+T R
Sbjct: 841  LSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK-IQNTKR 898



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALSWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|298707958|emb|CBJ30329.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 397

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 9/137 (6%)

Query: 991  PDKVIIFSQFLEHIHVIEQQL--TVAGIKFAGM-------YSPMHSSNKIKSLDMFRHDA 1041
            P K I+FSQFL  ++++  +    + G    G         +     N+ K L+ FR D 
Sbjct: 31   PLKAIVFSQFLPVLNIVGDKFLRELGGFPEEGWQRRGEKCVAEFWGKNRAKELERFRTDP 90

Query: 1042 SCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRG 1101
             C  LL+    + GLDLSFVT +FLM+ IWDRS+E QV++RA+RMGA   + V  L M+ 
Sbjct: 91   ECFVLLLGKRGAHGLDLSFVTHMFLMDQIWDRSLETQVVARANRMGAKGSVSVVQLIMKD 150

Query: 1102 TVEEQMLEFLQDTDRCR 1118
            T+E+++  ++   D+ R
Sbjct: 151  TMEQELRSYVNSDDKTR 167


>gi|338725467|ref|XP_001917731.2| PREDICTED: LOW QUALITY PROTEIN: transcription termination factor 2
            [Equus caballus]
          Length = 1167

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 128/538 (23%), Positives = 229/538 (42%), Gaps = 85/538 (15%)

Query: 611  YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
            + S  TLIV P+ L+ HWK ++++ V   +L ++++    +     +   YD+VITT++ 
Sbjct: 644  FTSCKTLIVCPASLIHHWKNEVEKCVSNNKLRVYLYHGPNRDQRAKVLSMYDIVITTYSL 703

Query: 671  LSAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS 714
            L+ E   RK+               +P++++ W R++LDE H      N+ N ++Q +I+
Sbjct: 704  LAKEIPTRKQEGETPGANLRVERISTPLLRIVWARIILDEAH------NVKNPRVQTSIA 757

Query: 715  ---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME 771
               L A  RW +TGTP  N     L  +  +LKFL    + +    W   +    +   +
Sbjct: 758  VCKLQAHARWAVTGTPIQNN----LLDMYSLLKFLRCSPFDEF-SLWKSQV----DNGSK 808

Query: 772  EGRSRLLQLLHRCMISARKTDLQT-------IPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
            +G  RL  L    ++   K  L +       +P    ++  L  +E+    Y+ L  + R
Sbjct: 809  KGGERLSILTKSLLLRRTKDQLDSTGKPLVMLPQRKFQLHHLKLSEDEETVYSVLFASSR 868

Query: 825  RNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLV 884
              +     +  +  ES  NP      +   R       VA     T  G  +    D+  
Sbjct: 869  SAL----QSYLTRHESGGNPSGRSPDNPFSR-------VAQEFGSTGPGHSV--AADLQG 915

Query: 885  ENGLDPLSQEYAFIKYNLLNGGNCLRHI----LCLDCVAMDSEKCSLPGCGFLYEMQSPE 940
             + +  LSQ        LL    C  H+      LD   + SE   L     L E  S  
Sbjct: 916  SSTVHILSQ--------LLRLRQCCCHLSLLKSALDPTELKSEALVL----SLEEQLSAL 963

Query: 941  ILTRPENPNPKWPVPQD----LIELQPSYRQWSNTNTFLKQ-DLYRPNLESNKALPDKVI 995
             L+  +N  P   V  +     +EL    R+ +  ++ L + +  R N  S K+     +
Sbjct: 964  TLSELDNLEPSSTVALNGKCFQVELFEDVRESTKISSLLAELEAIRRNSGSQKS-----V 1018

Query: 996  IFSQFLEHIHVIEQQLTVAGIKFA---GMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            I SQ+   + V+   L   G+ +A   G  +P    + +++ +  R     L  L+ G  
Sbjct: 1019 IVSQWTSMLKVVALHLKRRGLTYATIDGSVNPKQRMDLVEAFNSSRGPQVMLISLLAG-- 1076

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             +GL+L+    +FL++  W+ S+E+Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1077 GVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQL 1134


>gi|198437252|ref|XP_002124935.1| PREDICTED: similar to transcription termination factor, RNA
            polymerase II [Ciona intestinalis]
          Length = 1071

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 127/540 (23%), Positives = 230/540 (42%), Gaps = 106/540 (19%)

Query: 610  LYLSRATLIVVPSYLVDHWKTQIQQ--HVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITT 667
            L+ S +TLI+ P+ L+ HWK +I    H     +HL+   D ++  A  LA ++DVVITT
Sbjct: 565  LFPSNSTLILAPASLIFHWKNEINNRCHKDLLSIHLYHGKDRER-DAEKLA-EFDVVITT 622

Query: 668  FNRLSAEWGR-----------------RKKSPMMQ----VHWLRVMLDEGHTLGSSLNLT 706
            ++ +     +                  K  P+      + W RV+LDE H +    N  
Sbjct: 623  YDVVRRTHPKPPKQTGLTTDTKPVTIDTKSDPLEHALFLIKWRRVILDEAHQI---RNFK 679

Query: 707  NKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRP 765
            ++  MA  +L A +RW ++GTP  N    Q S +  M+KFLH   + ++ K W   +   
Sbjct: 680  SQTSMAACALNAHSRWAMSGTPVQN----QESDMYAMIKFLHCSPFDEH-KLWKNQV--- 731

Query: 766  FEAEMEEGRSRLLQLLHRCMISARKTD--------LQTIPLCIKEVTFLNFTEEHAGTYN 817
                   G+ RL  L+  C++  R+ +        L  +P    EV  L   +     Y+
Sbjct: 732  -SNNTTRGQQRLKTLV-SCLVLRREKNQRGLDGKPLVKLPERKFEVHKLKLNDVEREVYD 789

Query: 818  ELVVTVRRNILMADWN-DPSHVESLLNPKQWKFRSTT--IRNLRL-SCCVAGHIKVTDAG 873
            +L    +      + + D SH  + +  K+ K  +TT  +  LRL  CC  GH+ +    
Sbjct: 790  KLKSESQAAYKSYEHSKDGSHRTNHIEEKK-KMSATTLLVMLLRLRQCC--GHLHL---- 842

Query: 874  EDIQETMD-VLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGF 932
              +Q+T D  L++   + ++ E  F   N           +     +  S+K S      
Sbjct: 843  --LQDTFDPELLQKEKEEIAVEDLFQSMN-----------IGASASSFSSDKYSDKSKAK 889

Query: 933  LYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD 992
             +E+                         QPS +     +T  K  + +P+        D
Sbjct: 890  YFEIS------------------------QPSSKITFVMDTLKKLSVEKPD--------D 917

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHD--ASCLALLMDG 1050
            K +I SQ+   ++++   L  A   +A +   +++  +++ +D F  +     + L+   
Sbjct: 918  KCVIISQWTSMLNILAHHLAAAKFSYAVIDGSVNARKRMELVDNFNKNPVKPKIMLISLQ 977

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +  +GL+L     +FL++  W+ ++E+Q   R +R+G  + + V    M  TVEEQ+L+ 
Sbjct: 978  AGGVGLNLIGGNHLFLLDMHWNPALEKQAFDRIYRVGQKKEVFVHKFIMEETVEEQILQL 1037


>gi|303279062|ref|XP_003058824.1| SNF2 super family [Micromonas pusilla CCMP1545]
 gi|226459984|gb|EEH57279.1| SNF2 super family [Micromonas pusilla CCMP1545]
          Length = 828

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 116/522 (22%), Positives = 218/522 (41%), Gaps = 62/522 (11%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFV--WTDHKKPSAHSLAWDYDVVITTFNRL 671
            + TL+V P  ++ +W+ Q++ H   G L  +    +D    +AH     +DVVITT+  L
Sbjct: 326  KTTLVVCPLSVLSNWEKQLEDHT-DGSLTSYRHHGSDRSLDAAH--LERHDVVITTYGTL 382

Query: 672  SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
            +++        + +  +LRV+LDE H + +      +   A  + A  RW +TGTP  N 
Sbjct: 383  ASDI----DGVLGRARFLRVVLDEAHNVKNPR--ATQTLAAYKVKADRRWAITGTPIQN- 435

Query: 732  PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
               +LS L  +L F+   A   +++ W   + +P +     G  RL+  +    ++ R+T
Sbjct: 436  ---RLSDLHSLLAFVRL-APLDDRQFWMRNVEKPVKIGDPRGFDRLVTTV--AAMALRRT 489

Query: 792  DLQ-------TIPLCIKEVT----------FLNFTEEHAGTYNELVVTVRRNILMADWND 834
              Q        + L  K V            + +    A   + +   +    +  D+  
Sbjct: 490  KDQRDERGEPIVHLPKKTVVVQRVDLDAADMMRYRARLAAAQDTIGAMLEDGSVFRDY-- 547

Query: 835  PSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQE 894
             + +E +L  +Q       +     +   A    +T+  + ++  +DVL   GLD     
Sbjct: 548  ATALELILRLRQLCCHGDLVPAESSAASAAPAAALTE--DALKRLLDVLKLGGLDDCC-- 603

Query: 895  YAFIKYNLLNGGNCLR--HILCLDCVAMDSE-KCSLPGCGFLYEMQSPEILTRPENPNPK 951
               I  N ++     R  H+ C  C+A   E K + P C       + +++  P +    
Sbjct: 604  ---ICLNTMHAPVVTRCAHVFCRGCLAPALERKATCPLC--RAPCAARDLVEAPADET-- 656

Query: 952  WPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQL 1011
                +D      + R  +     +  D  R +L        K ++FSQF+  + +     
Sbjct: 657  ----EDGTTTTTTTRPSAKVTALV--DRLRADLGGEPGA--KAVVFSQFVAFLDIARDAC 708

Query: 1012 TVAGIK---FAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLME 1068
              AG K     G          I+S      DA  +  +   +  +G++L+  ++V++++
Sbjct: 709  AAAGFKTCRITGAVPVAERERVIRSFQSNASDAPDVVFVSLKAGGVGINLTAASKVYMLD 768

Query: 1069 PIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            P W+ ++EEQ + R HR+G T+ + V   A   T+EE+MLE 
Sbjct: 769  PWWNPAVEEQAMDRVHRLGQTKDVTVVRFAATDTIEEKMLEL 810


>gi|115438138|ref|XP_001217989.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114188804|gb|EAU30504.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 948

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 116/219 (52%), Gaps = 18/219 (8%)

Query: 592 FDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHK 650
             + +L LA  +PL      +S++TLIV P  ++ +W+ QIQ H  PG+   + V+    
Sbjct: 377 IQIISLILANPQPLTP---GISKSTLIVSPVGVMSNWRNQIQDHTHPGRSPRVLVYHGQG 433

Query: 651 KPSAHSLAWDYDVVITTFNRLSAEWGRRKKSP----MMQVHWLRVMLDEGHTLGSSLNLT 706
           K  A +L   YDVVIT++  L+ E+  + K P    +  +HW RV+LDEGHT+    N  
Sbjct: 434 KKEAANLD-HYDVVITSYGALAMEYNPKAKVPPKTGIFSLHWRRVVLDEGHTI---RNPR 489

Query: 707 NKLQMAIS-LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRP 765
           +K  +A S L A +RW LTGTP  N+    L  L   +++L      ++   ++G ++RP
Sbjct: 490 SKGALAASNLRADSRWSLTGTPIVNS----LKDLYSQVRYLKLSGGLEDMAVFNGALIRP 545

Query: 766 FEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVT 804
             +   + R  LLQ L   +   R+ D++ + L +  +T
Sbjct: 546 LTSGDPDAR-LLLQALMSTICLRRRKDMEFVNLRLPPLT 583



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQ+   ++++E  L   GI FA +   M+S  +  S   F  D  C  LL   S 
Sbjct: 795  KTVVFSQWTSFLNLLEPHLHRVGIGFARIDGKMNSVARDNSTYRFSRDPQCTVLLASLSV 854

Query: 1053 -SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S+GL+L    +  L +  W  ++E+Q + R +R+G  R   V  L M  ++E+++L  +
Sbjct: 855  CSVGLNLVAANQAILADSWWAPAIEDQAVDRVYRLGQKRETTVWRLVMEDSIEDRVLA-I 913

Query: 1112 QDTDR 1116
            QD  R
Sbjct: 914  QDVKR 918



 Score = 45.4 bits (106), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 23/142 (16%)

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEV--LRHPLYIDLATEDGFYFYVNTVSGDIATGTAP 219
            +  +L P+Q+  + WM+ +E N ++        + L   DG  F    ++ + +T  AP
Sbjct: 303 ALATELLPYQRQGLAWMIGQE-NPQLPSAGSTDIVQLWKRDGSRF--TNIATNFSTSIAP 359

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLILK---------TQGTLADPPDGVKIIW------C 264
            +    GG+  D+ GLGKTI  +SLIL          ++ TL   P GV   W       
Sbjct: 360 PLAS--GGILADDMGLGKTIQIISLILANPQPLTPGISKSTLIVSPVGVMSNWRNQIQDH 417

Query: 265 THNG-DPRCGYYDLSGDKLTCN 285
           TH G  PR   Y   G K   N
Sbjct: 418 THPGRSPRVLVYHGQGKKEAAN 439


>gi|348687939|gb|EGZ27753.1| hypothetical protein PHYSODRAFT_321491 [Phytophthora sojae]
          Length = 1055

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 107/231 (46%), Gaps = 47/231 (20%)

Query: 585 KTLDNLAFDLAALRLALCE-PLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHL 643
           KT+  LA  L     +  E P DS  +  S A LIVV   LVDHW+ QI+ H+    L  
Sbjct: 334 KTITMLALILLTKGQSTSEMPADS--MVSSSACLIVVSDALVDHWEEQIEAHIVNQGLRT 391

Query: 644 FV--WTDHKKPSAHSLAWDYDVVITTFNRLSAEWG------------------------- 676
           +V        P ++ LA  YDVVI +F R++ EW                          
Sbjct: 392 YVDKAVAGSLPESNRLA-RYDVVIVSFTRMAKEWKLHRPPSALEARRAPRFDFEDQPDRY 450

Query: 677 -----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
                R + S ++ +HWLRV++DEGH LG     T  +QM+  L A  RW++TGTP+PNT
Sbjct: 451 LDGSVRGEVSSLLSIHWLRVVVDEGHKLGGRAP-TQLMQMSRLLCAERRWVMTGTPSPNT 509

Query: 732 PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
             S  + LQ + +         +  AW   I+RPFE     G  RL  L +
Sbjct: 510 LQS--ADLQYIGR--------PDGFAWAKAIVRPFEGNEPVGFHRLQHLTY 550



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 10/94 (10%)

Query: 160 MPCMKLKLFPHQQAAVEWMLHREWNA---EVLRHPLYIDLATEDGFYFYVNTVSGDIATG 216
           +P + LKL+ HQ+  + WM+ RE  A     LRHP  +           + +  GD    
Sbjct: 261 IPGLDLKLYEHQRRGLSWMMKREEAALWETTLRHPFSVPGRLRHASDRLLESEFGD---- 316

Query: 217 TAPTMRDFHGGMFCDEPGLGKTITALSLILKTQG 250
              T RD  GGM CDEPGLGKTIT L+LIL T+G
Sbjct: 317 ---TARDVCGGMLCDEPGLGKTITMLALILLTKG 347



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 33/47 (70%)

Query: 1070 IWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            IWD+S+E QVISRAHRMGA R + VE L MRGTVE Q+    Q   R
Sbjct: 828  IWDKSVEMQVISRAHRMGAKRSVVVEQLWMRGTVECQLSSTNQQLSR 874


>gi|350631431|gb|EHA19802.1| hypothetical protein ASPNIDRAFT_56021 [Aspergillus niger ATCC 1015]
          Length = 1137

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 139/297 (46%), Gaps = 39/297 (13%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           LS+ TL+V P  L+  W+++I   V    ++ + V+  + +        DYDVVITT+  
Sbjct: 433 LSKTTLVVAPLALIKQWESEISDKVENSHRMRVLVYHGNARAKGTDKLEDYDVVITTYGT 492

Query: 671 LSAEWGRR----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           L++E G +    KKSP+  V+W R++LDE HT+ +        Q A SL A  RW L+GT
Sbjct: 493 LTSEHGAKDKNNKKSPIFSVYWYRIILDEAHTIKN--RNAKATQAAYSLDAEYRWCLSGT 550

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLH 782
           P  N     L  LQ ++KFL  + +  +  AW   I++P    +  GR  L    LQ+  
Sbjct: 551 PMQNN----LEELQSLIKFLRIKPF-NDLAAWKEQIMKP----IANGRGGLAIERLQIYL 601

Query: 783 RCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTY--NELVVTVRRNILMADWN------- 833
           +  +  R  D+      +K     N  ++ +G +     V+ V  + +  + N       
Sbjct: 602 KIFMKRRTKDVLKQNANLKPSE--NGQKKSSGFHIVKREVIKVEADFMPGEMNFYQRLEQ 659

Query: 834 -DPSHVESLLNPKQWKFRSTTIRNLRL--SCCVAGHIKVTDAGEDIQETMDVLVENG 887
              + +E ++  ++  +    +  LRL  SC     +K      D+ +  DVL++NG
Sbjct: 660 RTENSLEKMMGGEKVDYAGALVLLLRLRQSCNHPDLVK-----SDLAQDKDVLLQNG 711



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L   GI +A     M + ++  SL+  R+++    LL    +
Sbjct: 922  KFIVFSVFTSMLDKIEPFLKRTGIGYARYDGGMRNDHREASLNKLRNNSGTRVLLCSLRA 981

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             +LGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  + ++GTVEE++++ L
Sbjct: 982  GALGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKMIIKGTVEERIID-L 1040

Query: 1112 QDTDR 1116
            QD  R
Sbjct: 1041 QDRKR 1045


>gi|317032364|ref|XP_001394676.2| SNF2 family helicase/ATPase [Aspergillus niger CBS 513.88]
          Length = 1137

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 139/297 (46%), Gaps = 39/297 (13%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           LS+ TL+V P  L+  W+++I   V    ++ + V+  + +        DYDVVITT+  
Sbjct: 432 LSKTTLVVAPLALIKQWESEISDKVENSHRMRVLVYHGNARAKGTDKLEDYDVVITTYGT 491

Query: 671 LSAEWGRR----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           L++E G +    KKSP+  V+W R++LDE HT+ +        Q A SL A  RW L+GT
Sbjct: 492 LTSEHGAKDKNNKKSPIFSVYWYRIILDEAHTIKN--RNAKATQAAYSLDAEYRWCLSGT 549

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLH 782
           P  N     L  LQ ++KFL  + +  +  AW   I++P    +  GR  L    LQ+  
Sbjct: 550 PMQNN----LEELQSLIKFLRIKPF-NDLAAWKEQIMKP----IANGRGGLAIERLQIYL 600

Query: 783 RCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTY--NELVVTVRRNILMADWN------- 833
           +  +  R  D+      +K     N  ++ +G +     V+ V  + +  + N       
Sbjct: 601 KIFMKRRTKDVLKQNANLKPSE--NGQKKSSGFHIVKREVIKVEADFMPGEMNFYQRLEQ 658

Query: 834 -DPSHVESLLNPKQWKFRSTTIRNLRL--SCCVAGHIKVTDAGEDIQETMDVLVENG 887
              + +E ++  ++  +    +  LRL  SC     +K      D+ +  DVL++NG
Sbjct: 659 RTENSLEKMMGGEKVDYAGALVLLLRLRQSCNHPDLVK-----SDLAQDKDVLLQNG 710



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L   GI +A     M + ++  SL+  R+++    LL    +
Sbjct: 922  KFIVFSVFTSMLDKIEPFLKRTGIGYARYDGGMRNDHREASLNKLRNNSGTRVLLCSLRA 981

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             +LGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  + ++GTVEE++++ L
Sbjct: 982  GALGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKMIIKGTVEERIID-L 1040

Query: 1112 QDTDR 1116
            QD  R
Sbjct: 1041 QDRKR 1045


>gi|149408770|ref|XP_001508504.1| PREDICTED: helicase-like transcription factor [Ornithorhynchus
           anatinus]
          Length = 884

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 96/179 (53%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           RATLI+ P  ++ +W  Q  QH++    L+ +V+    +    ++    DVV+TT+N L+
Sbjct: 352 RATLIICPLSVLSNWIDQFGQHLKSDVHLNFYVYYGPDRSKDPTVLSKQDVVLTTYNVLT 411

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G R  SP+ ++ WLRV+LDEGHT+ +      + + A+ L A  RW+LTGTP  N+ 
Sbjct: 412 YDYGSRGDSPLHKIRWLRVILDEGHTIRNP--NAQQTKAALDLEAERRWILTGTPIQNS- 468

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     + G  RL  L+    +   KT
Sbjct: 469 ---LKDLWSLLSFLKLKPF-TDREWWHRTIQRPVTMGDQGGLRRLQSLIKNITLRRTKT 523



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH---DASCLALLMD 1049
            K +I SQF   + +IE+ L  +G  F  +   M    +++S+  F+     +  + LL  
Sbjct: 728  KSLIVSQFTTFLSLIEKPLKESGFVFTRLDGSMPQKKRVESIQCFQSTEAGSPTIMLLSL 787

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 788  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVVITKFIVKDSVEENMLK 847

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 848  -IQNKKR 853


>gi|346320054|gb|EGX89655.1| DNA repair protein RAD16 [Cordyceps militaris CM01]
          Length = 1020

 Score = 96.7 bits (239), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 146/601 (24%), Positives = 255/601 (42%), Gaps = 99/601 (16%)

Query: 578  ITRWYYPKTLDNLAF-----------DLAALRLALCEPLDSVRLYLS-----RATLIVVP 621
            I+R   P  L+ LA+            L    + L + + +V L +S     + TL++VP
Sbjct: 413  ISRRLKPFQLEGLAWMKEMEKREWRGGLLGDEMGLGKTIQAVSLIMSDYPAKQPTLVLVP 472

Query: 622  SYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTFNRLSA----- 673
               +  W+++I+ +   G L  FV+      +      D   YDV++ ++N L +     
Sbjct: 473  PVALMQWQSEIKSYT-DGTLKTFVFHGTNAKTKGMQIKDLKKYDVIMMSYNSLESIYRKQ 531

Query: 674  EWGRRKK-------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
            E G ++K       S +  +H+ R++LDE H + +   +T K   A  L  + RW LTGT
Sbjct: 532  ERGFKRKDGLYKAESVIHAIHFHRIILDEAHCIKTRTTMTAKACFA--LKTNYRWCLTGT 589

Query: 727  PTPNTPNSQLS-----HLQPMLKFL-------------------HEEAYG--QNQKAWDG 760
            P  N      S     +++P   +L                   H   +G  Q+   ++ 
Sbjct: 590  PLQNRIGELFSLIRFLNIKPFASYLCKQCPCSTLEWDMDEDHRCHNCGHGGMQHVSVFNQ 649

Query: 761  GILRPFE--AEMEEGRS--RLLQLLH-RCMISARKTD-LQTIPLCIKEVTFLN---FTEE 811
             +L P +       GR   R L+L+  R M+   K D    + L +KEV F+N   F EE
Sbjct: 650  ELLNPIQKFGNFGPGREAFRKLRLMTTRIMLRRLKKDHTNAMELPVKEV-FVNRQFFGEE 708

Query: 812  HAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTD 871
                   ++   +R      ++   H   LLN     F    I  +R    VA H  +  
Sbjct: 709  ENDFAGSIMTNGQRK-----FDTYVHQGVLLNNYANIF--GLIMQMRQ---VADHPDLI- 757

Query: 872  AGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCG 931
              ++ +   +VL+    D  +++    +          +H  C  CVA        P C 
Sbjct: 758  LKKNAEGGQNVLICCICDEPAEDTVRSR---------CKHDFCRSCVASYIHSTDEPDCP 808

Query: 932  FLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNT--FLKQDLYRPNLESNKA 989
              +   S + L +PE    +  V +  I  +     W++++    L  +L++  L S+ A
Sbjct: 809  RCHIPLSID-LEQPEIEQDQSMVKKSSIINRIKMDNWTSSSKIELLVHELHK--LRSDNA 865

Query: 990  LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH--DASCLALL 1047
               K IIFSQF   + ++E +L  AGI    +   M  + +  S++ F +  D  C  L+
Sbjct: 866  -SHKSIIFSQFTTMLQLVEWRLRRAGITTVMLDGSMTPAQRQASIEHFMNNVDVECF-LV 923

Query: 1048 MDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
               +  + L+L+  +RVF+++P W+ + E Q   R HR+G TRP  +  L +  +VE +M
Sbjct: 924  SLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQTRPCTITRLCIEDSVESRM 983

Query: 1108 L 1108
            +
Sbjct: 984  V 984


>gi|396494216|ref|XP_003844252.1| hypothetical protein LEMA_P019030.1 [Leptosphaeria maculans JN3]
 gi|312220832|emb|CBY00773.1| hypothetical protein LEMA_P019030.1 [Leptosphaeria maculans JN3]
          Length = 1533

 Score = 96.7 bits (239), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 136/639 (21%), Positives = 254/639 (39%), Gaps = 128/639 (20%)

Query: 548  PILGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDS 607
            P+L +  A +    ++  + F L     +G++ W   +   +    L    + + + + +
Sbjct: 423  PVLETQMAEQPTSINRRLKPFQL-----EGLS-WMIRQEKTHYKGGLLGDEMGMGKTIQA 476

Query: 608  VRLYLS-----RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW----TDHKKPSAHSLA 658
            V L +S     + TL+ VP   +  W  +I+++    +L + V+       KK S   L 
Sbjct: 477  VSLIMSDYPAKQPTLVCVPPVALMQWSNEIREYT-DNKLKVLVYHGTNAKCKKMSVKELK 535

Query: 659  WDYDVVITTFNRLSA-------EWGR-----RKKSPMMQVHWLRVMLDEGHTLGSSLNLT 706
              YDV++ ++N L +        W R     ++ S +  +H+ R++LDE H++ S    T
Sbjct: 536  -SYDVIMVSYNSLESLHRKETKGWSRGEDIIKEASALHAIHYHRLILDEAHSIKS--RNT 592

Query: 707  NKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYG-------------- 752
               +   +LT++ +W L+GTP  N    ++     +L+FL    +               
Sbjct: 593  GVAKACFALTSNYKWCLSGTPVQN----RIGEFFSLLRFLEVRPFADYFCRSCDCEKLHW 648

Query: 753  ----------------QNQKAWDGGILRPFEAEMEEGRSRLLQLLH----RCMISARKTD 792
                            ++   ++  +L P   E  E R + L  LH    R M+   K D
Sbjct: 649  AVDDDYMCVACNHGASEHISVFNQELLNPITGEDVELREQALAKLHLITARIMLRRMKRD 708

Query: 793  -LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS 851
               ++ L +K++            +NE    V R+             S+++    KF +
Sbjct: 709  HTNSMELPMKDIII----------HNEFFSEVERDF----------STSIMSNSSRKFDT 748

Query: 852  TTIRNLRLSCC------------VAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIK 899
               + + L+              VA H  +      ++ + +V V N  D  +++     
Sbjct: 749  YVAQGVMLNNYANIFGLIMQMRQVANHPDLLLKKTAVEGSGNVYVCNICDEPAEDAV--- 805

Query: 900  YNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEI-------LTRPENPNPKW 952
                   +C RH  C  C+    + C   G     E   P           +PE    + 
Sbjct: 806  -----RSHC-RHEFCRACIKDFMDTCEASGT----EADCPRCHLALAIDFEQPELEQDED 855

Query: 953  PVPQDLIELQPSYRQWSNTNTF--LKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQ 1010
             V +  I  +     W+++     L  DLY+  L S K    K I+FSQF   + +IE +
Sbjct: 856  SVKKTSIINRIKMENWTSSTKIEMLVYDLYK--LRSKKQTL-KSIVFSQFTSMLQLIEWR 912

Query: 1011 LTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEP 1069
            L  AG     +   M  + + KS+D F  +      L+   +  + L+L+  +RVF+++P
Sbjct: 913  LRRAGFNTVMLDGSMSPAQRQKSIDHFMTNPDVEVFLVSLKAGGVALNLTEASRVFIVDP 972

Query: 1070 IWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             W+ + E Q   R HR+G  RP  +  L +  +VE +M+
Sbjct: 973  WWNPAAEWQSADRCHRIGQKRPCVITRLCIEDSVESRMV 1011


>gi|14195095|sp|P79051.2|RHP16_SCHPO RecName: Full=ATP-dependent helicase rhp16; AltName: Full=DNA repair
            protein rhp16; AltName: Full=RAD16 homolog
          Length = 861

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 130/604 (21%), Positives = 251/604 (41%), Gaps = 114/604 (18%)

Query: 582  YYPKTLDNLAFD--LAALRLALCEPLDSVRLYLS----RATLIVVPSYLVDHWKTQIQQH 635
            Y+ K  ++ +F   + A  + + + + ++ L LS    + TL+V P   +  WK +I  H
Sbjct: 264  YWLKRQEDSSFGGGILADEMGMGKTIQTIALLLSEPRGKPTLVVAPVVAIMQWKEEIDTH 323

Query: 636  VRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGR------------RKKSPM 683
                      +   +  S   L+  YDVV+T++N + + + +            ++KS +
Sbjct: 324  TNKALSTYLYYGQARDISGEELS-SYDVVLTSYNVIESVYRKERSGFRRKNGVVKEKSLL 382

Query: 684  MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPML 743
             Q+ + R++LDE H + S     N  +    L  + +  L+GTP  N    ++  L  +L
Sbjct: 383  HQMEFYRIILDEAHGIKS--RTCNTARAVCGLRTTRKICLSGTPLQN----RIGELFSLL 436

Query: 744  KFLHEEAYG------------------------------QNQKAWDGGILRPFEAEMEEG 773
            +FL  + +                                +   ++  +L+P +    EG
Sbjct: 437  RFLRADPFAYYYCLQCECKSLHWRFSDRSNCDECGHKPMSHTCYFNAEMLKPIQKFGYEG 496

Query: 774  RSRL-LQLLHRCM--ISARKTDLQT-----IPLCIKEVTFLNFTEEHAGTYNELVVTVRR 825
              +L  + +H  +  I  R+T L+      +P  + EV    F EE    Y  L +  +R
Sbjct: 497  PGKLAFKKVHSLLKHIMLRRTKLERADDLGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKR 556

Query: 826  --NILMAD---WNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETM 880
              N  +A+    N+ +++  L+         T +R +      A H  +  A +  ++T+
Sbjct: 557  KFNTYLAEGVVLNNYANIFQLI---------TRMRQM------ADHPDLVLASK--RKTV 599

Query: 881  DVLVENGL-----DPLSQEYAFIKYNLLNGGNCLRHILCLDCV------AMDSEKCSLPG 929
            D+  +  +     D ++Q+             C  H  C  CV      A D E  + P 
Sbjct: 600  DIENQENIVCKICDEVAQDAI--------ESRC-HHTFCRLCVTEYINAAGDGENVNCPS 650

Query: 930  C--GFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESN 987
            C      ++ +P +    E    K+     L  +  +  + S     L ++LY   L   
Sbjct: 651  CFIPLSIDLSAPALEDFSEE---KFKNASILNRIDMNSWRSSTKIEALVEELY---LLRK 704

Query: 988  KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALL 1047
            K    K I+FSQF   + +I  +L  AG     +   M    +  +++ F +D +    L
Sbjct: 705  KDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSNDINITIFL 764

Query: 1048 MDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQ 1106
            +   A  + L+L+  ++VF+M+P W+ +++ Q + R HR+G  RPI V TL +  ++E +
Sbjct: 765  VSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCIENSIESK 824

Query: 1107 MLEF 1110
            ++E 
Sbjct: 825  IIEL 828


>gi|19075201|ref|NP_587701.1| ATP-dependent helicase [Schizosaccharomyces pombe 972h-]
 gi|3647341|emb|CAA21065.1| Rad16 homolog Rhp16 [Schizosaccharomyces pombe]
          Length = 963

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 130/604 (21%), Positives = 251/604 (41%), Gaps = 114/604 (18%)

Query: 582  YYPKTLDNLAFD--LAALRLALCEPLDSVRLYLS----RATLIVVPSYLVDHWKTQIQQH 635
            Y+ K  ++ +F   + A  + + + + ++ L LS    + TL+V P   +  WK +I  H
Sbjct: 366  YWLKRQEDSSFGGGILADEMGMGKTIQTIALLLSEPRGKPTLVVAPVVAIMQWKEEIDTH 425

Query: 636  VRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGR------------RKKSPM 683
                      +   +  S   L+  YDVV+T++N + + + +            ++KS +
Sbjct: 426  TNKALSTYLYYGQARDISGEELS-SYDVVLTSYNVIESVYRKERSGFRRKNGVVKEKSLL 484

Query: 684  MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPML 743
             Q+ + R++LDE H + S     N  +    L  + +  L+GTP  N    ++  L  +L
Sbjct: 485  HQMEFYRIILDEAHGIKS--RTCNTARAVCGLRTTRKICLSGTPLQN----RIGELFSLL 538

Query: 744  KFLHEEAYG------------------------------QNQKAWDGGILRPFEAEMEEG 773
            +FL  + +                                +   ++  +L+P +    EG
Sbjct: 539  RFLRADPFAYYYCLQCECKSLHWRFSDRSNCDECGHKPMSHTCYFNAEMLKPIQKFGYEG 598

Query: 774  RSRL-LQLLHRCM--ISARKTDLQT-----IPLCIKEVTFLNFTEEHAGTYNELVVTVRR 825
              +L  + +H  +  I  R+T L+      +P  + EV    F EE    Y  L +  +R
Sbjct: 599  PGKLAFKKVHSLLKHIMLRRTKLERADDLGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKR 658

Query: 826  --NILMAD---WNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETM 880
              N  +A+    N+ +++  L+         T +R +      A H  +  A +  ++T+
Sbjct: 659  KFNTYLAEGVVLNNYANIFQLI---------TRMRQM------ADHPDLVLASK--RKTV 701

Query: 881  DVLVENGL-----DPLSQEYAFIKYNLLNGGNCLRHILCLDCV------AMDSEKCSLPG 929
            D+  +  +     D ++Q+             C  H  C  CV      A D E  + P 
Sbjct: 702  DIENQENIVCKICDEVAQDAI--------ESRC-HHTFCRLCVTEYINAAGDGENVNCPS 752

Query: 930  C--GFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESN 987
            C      ++ +P +    E    K+     L  +  +  + S     L ++LY   L   
Sbjct: 753  CFIPLSIDLSAPALEDFSEE---KFKNASILNRIDMNSWRSSTKIEALVEELY---LLRK 806

Query: 988  KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALL 1047
            K    K I+FSQF   + +I  +L  AG     +   M    +  +++ F +D +    L
Sbjct: 807  KDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSNDINITIFL 866

Query: 1048 MDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQ 1106
            +   A  + L+L+  ++VF+M+P W+ +++ Q + R HR+G  RPI V TL +  ++E +
Sbjct: 867  VSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCIENSIESK 926

Query: 1107 MLEF 1110
            ++E 
Sbjct: 927  IIEL 930


>gi|358369344|dbj|GAA85959.1| SNF2 family helicase/ATPase [Aspergillus kawachii IFO 4308]
          Length = 1131

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 20/191 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           LS+ TL+V P  L+  W+++I   V R  ++ + V+  + +        DYDVVITT+  
Sbjct: 428 LSKTTLVVAPLALIKQWESEISDKVERSHRMRVLVYHGNARAKGTDKLEDYDVVITTYGT 487

Query: 671 LSAEWGRR----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           L++E   +    KKSP+  V+W R++LDE HT+ +        Q A SL A  RW L+GT
Sbjct: 488 LTSEHSAKDKNNKKSPIFSVYWYRIILDEAHTIKN--RNAKATQAAYSLDAEYRWCLSGT 545

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLH 782
           P  N     L  LQ ++KFL  + +  +  AW   I++P    +  GR  L    LQ+  
Sbjct: 546 PMQNN----LDELQSLIKFLRIKPF-NDLAAWKEQIMKP----IANGRGGLAIERLQIYL 596

Query: 783 RCMISARKTDL 793
           +  +  R  D+
Sbjct: 597 KIFMKRRTKDI 607



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L   GI +A     M + ++   L+  R+++    LL    +
Sbjct: 916  KFIVFSVFTSMLDKIEPFLKRTGIGYARYDGGMRNDHREACLNKLRNNSGTRVLLCSLRA 975

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             +LGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  + ++GTVEE++++ L
Sbjct: 976  GALGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKMIIKGTVEERIID-L 1034

Query: 1112 QDTDR 1116
            QD  R
Sbjct: 1035 QDRKR 1039


>gi|296412641|ref|XP_002836031.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629831|emb|CAZ80188.1| unnamed protein product [Tuber melanosporum]
          Length = 876

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 21/226 (9%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           + TL+V P   + +W+ QI+ HV+ G L ++V+   K+  +      YDV++TT+  +  
Sbjct: 291 KTTLVVSPLSTIGNWEGQIKAHVKFGTLSVYVYHGPKRVLSIEKLAQYDVILTTYQIVGG 350

Query: 674 EWGRRKKS-----------PMMQVHWLRVMLDEGHTLGS-SLNLTNKLQMAISLTASNRW 721
           E+ +               P  ++H+ R++LDE H + S S+ LT  +   +SL A  RW
Sbjct: 351 EFAKHTTGGGGASASKGSCPFQKLHFFRIVLDEAHMIRSPSIMLTRAM---LSLNAQRRW 407

Query: 722 LLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLL 781
            +TGTP  N    +L  +  ++KFL    +  +  AW+  I  PF+    E  + L ++L
Sbjct: 408 AVTGTPIQN----RLGDIATLVKFLRIAPF-DDSTAWNKYIAAPFKNANIESIANLRRIL 462

Query: 782 HRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI 827
           H   +  R   +  +P    EV FL+F+      Y   +   RR +
Sbjct: 463 HSVTLR-RSKGIINLPPRKDEVVFLDFSSSEQQLYEATLRMSRRKL 507



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 1/126 (0%)

Query: 986  SNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
            S  + P K ++FS +  H+ +IE      GI F  +   M  + + + ++ F        
Sbjct: 716  STTSSPIKSVVFSCWTSHMDLIEIAFKDNGINFVRLDGSMTRTQRNRVMEDFERAPEISV 775

Query: 1046 LLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            +L+   +  LGL+L+   + ++MEP ++ + E Q I R HR+G TRP+      MR + E
Sbjct: 776  ILISIMAGGLGLNLTAACKAYVMEPQFNPAAESQAIDRIHRLGQTRPVTTTRYIMRDSFE 835

Query: 1105 EQMLEF 1110
             +++E 
Sbjct: 836  MKIVEL 841


>gi|414887862|tpg|DAA63876.1| TPA: hypothetical protein ZEAMMB73_072475 [Zea mays]
          Length = 561

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 9/169 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           SR TL+V P  +   W TQ+++H++ G L ++++   +      L   YD+V+TT++ L 
Sbjct: 294 SRTTLVVCPPSVFSSWVTQLEEHLKAGSLKVYMYHGERTRDKKEL-LKYDLVLTTYSILG 352

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            E+  ++ SP+  + W RV+LDE H + +S     + +  I+L A  RW++TGTP  N+ 
Sbjct: 353 TEF-EQEDSPVKDIEWFRVILDEAHVIKNS--AARQTKAVIALNAERRWVVTGTPIQNSS 409

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLL 781
                 L P++ FL  + +   +  W   I RP E   + G SRL  LL
Sbjct: 410 FD----LYPLMAFLRFQPF-SIKSYWQSLIQRPLEKGSKAGLSRLQNLL 453



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 9/85 (10%)

Query: 166 KLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFH 225
           +LF HQ+ A+ WM+HRE +A++   P +     + GF    N ++        P ++   
Sbjct: 196 ELFGHQKEALGWMVHREESADL---PPFWQEGEDGGFE---NVLTNQKTEKRPPPLK--- 246

Query: 226 GGMFCDEPGLGKTITALSLILKTQG 250
           GG+F D+ GLGKT+T LSLI +T+ 
Sbjct: 247 GGIFADDMGLGKTLTLLSLIGRTKA 271


>gi|334324545|ref|XP_001362697.2| PREDICTED: transcription termination factor 2 [Monodelphis domestica]
          Length = 1152

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 126/536 (23%), Positives = 229/536 (42%), Gaps = 89/536 (16%)

Query: 612  LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            +S  TLI+ P+ L+ HWK +I+++V   +L ++++    +     +   YDVVITT++ L
Sbjct: 630  ISHGTLIICPASLIHHWKKEIEKYVNGNRLRIYLYHGSNREQCAKVLSRYDVVITTYSLL 689

Query: 672  SAEWGRRK---------------KSPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS- 714
            + E   RK               KSP++Q+ W R++LDE H      N+ N ++Q +I+ 
Sbjct: 690  AKEIPTRKEEGDVPATDASVEDCKSPLLQIVWARIILDEAH------NIKNPRVQTSIAV 743

Query: 715  --LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEE 772
              L A  RW +TGTP  N     L  +  +L+FL    + +  K W   +    +    +
Sbjct: 744  CKLQAGARWAVTGTPIQNN----LLDMYSLLRFLRCSPFDEF-KLWKDQV----DNGSSK 794

Query: 773  GRSRLLQLLHRCMISARKTD--------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
            G  RL  +L + ++  R  D        L  +P    ++  L  +E+    YN ++ T  
Sbjct: 795  GGERL-NILTKSLLLRRTKDQLDSTGKPLVVLPQRRLKLHQLKLSEDEKAVYN-VLFTKS 852

Query: 825  RNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLV 884
            R+ L       S+++  L+  +    S      R    V    +  D G   +       
Sbjct: 853  RSTLQ------SYLKRHLSENKHSGGSPDNPFSR----VTKEFESCDPGPSTRA------ 896

Query: 885  ENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTR 944
                D        I   LL    C  H+  L    +D  + +  G  FL   +    LT 
Sbjct: 897  ----DSQGSSTVHILSLLLRLRQCCCHLSLLKST-LDQAELNSEGL-FLSLEEQLNALTL 950

Query: 945  PENPNPKWPV-----PQDLIELQPSYRQWSNTNTFLKQ-DLYRPNLESNKALPDKVIIFS 998
             E  NP          Q  +EL    R+ +  ++ L + +L + N E  K+     +I S
Sbjct: 951  SELHNPDSATVYLNGTQFKMELFEDTRESTKISSLLAELELIQKNSEFQKS-----VIVS 1005

Query: 999  QFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASC-------LALLMDGS 1051
            Q+   + ++   L   G+ +A +   ++   ++  ++ F +  SC       ++LL  G 
Sbjct: 1006 QWTCMLKIVAMHLQRRGLTYAVIDGSVNPKQRMDLVEAFNN--SCRGPQVMLISLLAGG- 1062

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
              +GL L+    +FL++  W+ ++E+Q   R +R+G  + + +       TVEE++
Sbjct: 1063 --VGLSLTGGNHLFLLDMHWNPALEDQACDRIYRVGQKKDVVIHRFVCEDTVEEKI 1116


>gi|440467949|gb|ELQ37142.1| transcription termination factor 2 [Magnaporthe oryzae Y34]
          Length = 1096

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 18/272 (6%)

Query: 597 LRLALCEPLDSVRLYL-SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAH 655
            ++ + EPL   +L   S+ATL+V P   V +W+ QI+QHV+P  L  +++    +    
Sbjct: 487 FKIPMQEPLGLTKLTRNSKATLLVCPLSTVTNWEEQIKQHVKPDTLSYYIYHGQNRTKDP 546

Query: 656 SLAWDYDVVITTFNRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQ 710
           ++  +YD+VITT+  +S+E   R K      P+ ++ W RV+LDE H +     L  + +
Sbjct: 547 AVLANYDLVITTYGSVSSELTARHKRRGNQYPLEEIGWFRVVLDEAHMIREQATL--QFK 604

Query: 711 MAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEM 770
               L A+ RW +TGTP  N    +L  L  +L F+  + +    K ++  I+ PF+   
Sbjct: 605 AICRLQANRRWAVTGTPVQN----RLDDLAALLAFIRLKPFDDRNK-FNQHIVTPFKLAD 659

Query: 771 EEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMA 830
            E   +L  L+    +  R  D   +P     V  L F+ E    Y+      +  +   
Sbjct: 660 PEIIDKLRALVDSITLR-RLKDRIHLPPRTDNVVKLTFSPEEQRLYDLFARNAKDRVQAL 718

Query: 831 DWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
                   E +L  K +     +I  LRL C 
Sbjct: 719 TGTR----ERILGGKTYIHILQSILRLRLICA 746



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FS +  H+ +IE  L  AGI    +   M    + +++D FR D S   +L+  
Sbjct: 935  PIKSVVFSGWTSHLDLIEIALDKAGITHTRLDGKMSRLARTQAMDRFREDPSVHVILVSI 994

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  LGL+L+    V++MEP ++ + E Q + R HR+G  RP+ +    M  + EEQM+ 
Sbjct: 995  MAGGLGLNLTAGNHVYVMEPQYNPAAEAQAVDRVHRLGQKRPVRIIRYIMENSFEEQMVA 1054

Query: 1110 FLQ 1112
              Q
Sbjct: 1055 LQQ 1057


>gi|148228350|ref|NP_001084942.1| transcription termination factor, RNA polymerase II [Xenopus laevis]
 gi|47122916|gb|AAH70581.1| MGC81081 protein [Xenopus laevis]
          Length = 1187

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 123/550 (22%), Positives = 233/550 (42%), Gaps = 103/550 (18%)

Query: 610  LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
            L ++R TLIV P+ LV HWK ++++ V   +L ++++    +    S+  DYD+V+TT++
Sbjct: 659  LVVTRGTLIVCPASLVHHWKKEVEKRVAGSRLKVYLYHGPSRERDCSVLADYDIVVTTYS 718

Query: 670  RLSAEWGRRKK------------------SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQ 710
             +S E   +K+                  SP++++ W R++LDE H      N+ N K+Q
Sbjct: 719  LVSKEIPVKKEEGDAPAKDQDLEDKASSSSPLLRMAWARIILDEAH------NIKNPKVQ 772

Query: 711  MAIS---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFE 767
             +I+   L A  RW +TGTP  N     L  +  +L+FL    + +  K W   +    +
Sbjct: 773  TSIAVCKLRAGARWAVTGTPIQNN----LLDMYSLLRFLRCSPFDEF-KLWKNQV----D 823

Query: 768  AEMEEGRSRLLQLLHRCMISARKTD--------LQTIPLCIKEVTFLNFTEEHAGTYNEL 819
                +G  R L +L + ++  R  D        L  +P    E+  L  +++    Y+ +
Sbjct: 824  NGSRKGGER-LNILTKSLLLRRTKDQMDHLGRPLVLLPQRRSELHKLTLSDKEKAVYDVI 882

Query: 820  VVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQET 879
                R                           +T++N         HI+  +     +  
Sbjct: 883  FARSR---------------------------STLQNYLKRHEGGTHIRTQNTDNPFERV 915

Query: 880  MDVL----VENGLDPLSQ--EYAFIKYNLLNGGNCLRHI----LCLDCVAMDSEKCSLPG 929
             +       E    P SQ      I   LL    C  H+    + L+ + + SE  SL  
Sbjct: 916  ANEFGSSQSEVSALPASQGSSTVHILSLLLRLRQCCGHLSLLKVVLEQLELKSEGLSL-- 973

Query: 930  CGFLYEMQSPEILTRPENPNPKWPV-------PQDLIELQPSYRQWSNTNTFLKQDLYRP 982
               L E  S   LT  + P+PK  V       P +L + +    + S+  + LK    R 
Sbjct: 974  --TLEEQLSALSLTECQGPDPKSTVSLNGTNFPSELFDTESQSTKISSLVSELK--TIRS 1029

Query: 983  NLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS 1042
            + E+ K+     +I SQ+   + ++   L + G+  A +   ++   ++  ++ F ++  
Sbjct: 1030 SSEAQKS-----VIVSQWTSMLKIVAVHLKLIGLSCATIDGSVNPKQRMDMVEDFNNNPK 1084

Query: 1043 CLALLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR 1100
               +++    +  +GL+L     +FLM+  W+ ++E+Q   R +R+G  + + +      
Sbjct: 1085 GPQVMLVSLCAGGVGLNLVGGNHLFLMDMHWNPALEDQACDRIYRVGQQKDVVIHRFVCL 1144

Query: 1101 GTVEEQMLEF 1110
            GTVEE++ + 
Sbjct: 1145 GTVEEKISQL 1154


>gi|440483511|gb|ELQ63894.1| transcription termination factor 2 [Magnaporthe oryzae P131]
          Length = 1096

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 18/272 (6%)

Query: 597 LRLALCEPLDSVRLYL-SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAH 655
            ++ + EPL   +L   S+ATL+V P   V +W+ QI+QHV+P  L  +++    +    
Sbjct: 487 FKIPMQEPLGLTKLTRNSKATLLVCPLSTVTNWEEQIKQHVKPDTLSYYIYHGQNRTKDP 546

Query: 656 SLAWDYDVVITTFNRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQ 710
           ++  +YD+VITT+  +S+E   R K      P+ ++ W RV+LDE H +     L  + +
Sbjct: 547 AVLANYDLVITTYGSVSSELTARHKRRGNQYPLEEIGWFRVVLDEAHMIREQATL--QFK 604

Query: 711 MAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEM 770
               L A+ RW +TGTP  N    +L  L  +L F+  + +    K ++  I+ PF+   
Sbjct: 605 AICRLQANRRWAVTGTPVQN----RLDDLAALLAFIRLKPFDDRNK-FNQHIVTPFKLAD 659

Query: 771 EEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMA 830
            E   +L  L+    +  R  D   +P     V  L F+ E    Y+      +  +   
Sbjct: 660 PEIIDKLRALVDSITLR-RLKDRIHLPPRTDNVVKLTFSPEEQRLYDLFARNAKDRVQAL 718

Query: 831 DWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
                   E +L  K +     +I  LRL C 
Sbjct: 719 TGTR----ERILGGKTYIHILQSILRLRLICA 746



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FS +  H+ +IE  L  AGI    +   M    + +++D FR D S   +L+  
Sbjct: 935  PIKSVVFSGWTSHLDLIEIALDKAGITHTRLDGKMSRLARTQAMDRFREDPSVHVILVSI 994

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  LGL+L+    V++MEP ++ + E Q + R HR+G  RP+ +    M  + EEQM+ 
Sbjct: 995  MAGGLGLNLTAGNHVYVMEPQYNPAAEAQAVDRVHRLGQKRPVRIIRYIMENSFEEQMVA 1054

Query: 1110 FLQ 1112
              Q
Sbjct: 1055 LQQ 1057


>gi|389635401|ref|XP_003715353.1| transcription termination factor 2 [Magnaporthe oryzae 70-15]
 gi|351647686|gb|EHA55546.1| transcription termination factor 2 [Magnaporthe oryzae 70-15]
          Length = 1113

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 18/272 (6%)

Query: 597 LRLALCEPLDSVRLYL-SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAH 655
            ++ + EPL   +L   S+ATL+V P   V +W+ QI+QHV+P  L  +++    +    
Sbjct: 504 FKIPMQEPLGLTKLTRNSKATLLVCPLSTVTNWEEQIKQHVKPDTLSYYIYHGQNRTKDP 563

Query: 656 SLAWDYDVVITTFNRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQ 710
           ++  +YD+VITT+  +S+E   R K      P+ ++ W RV+LDE H +     L  + +
Sbjct: 564 AVLANYDLVITTYGSVSSELTARHKRRGNQYPLEEIGWFRVVLDEAHMIREQATL--QFK 621

Query: 711 MAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEM 770
               L A+ RW +TGTP  N    +L  L  +L F+  + +    K ++  I+ PF+   
Sbjct: 622 AICRLQANRRWAVTGTPVQN----RLDDLAALLAFIRLKPFDDRNK-FNQHIVTPFKLAD 676

Query: 771 EEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMA 830
            E   +L  L+    +  R  D   +P     V  L F+ E    Y+      +  +   
Sbjct: 677 PEIIDKLRALVDSITLR-RLKDRIHLPPRTDNVVKLTFSPEEQRLYDLFARNAKDRVQAL 735

Query: 831 DWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
                   E +L  K +     +I  LRL C 
Sbjct: 736 TGTR----ERILGGKTYIHILQSILRLRLICA 763



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FS +  H+ +IE  L  AGI    +   M    + +++D FR D S   +L+  
Sbjct: 952  PIKSVVFSGWTSHLDLIEIALDKAGITHTRLDGKMSRLARTQAMDRFREDPSVHVILVSI 1011

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  LGL+L+    V++MEP ++ + E Q + R HR+G  RP+ +    M  + EEQM+ 
Sbjct: 1012 MAGGLGLNLTAGNHVYVMEPQYNPAAEAQAVDRVHRLGQKRPVRIIRYIMENSFEEQMVA 1071

Query: 1110 FLQ 1112
              Q
Sbjct: 1072 LQQ 1074


>gi|380482834|emb|CCF40992.1| DNA repair and recombination protein RAD5B, partial [Colletotrichum
           higginsianum]
          Length = 613

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 111/217 (51%), Gaps = 16/217 (7%)

Query: 590 LAFDLAALRLALCEPLDSVRLYLSRA---TLIVVPSYLVDHWKTQIQQHVRPGQL-HLFV 645
           L+  + A  + L + L  + L L+     TLIV P  ++ +W+ QI++HV+   L  +F 
Sbjct: 346 LSGGILADEMGLGKTLQVISLILTGGPGPTLIVAPLSVMSNWEQQIRRHVKQEHLPKIFT 405

Query: 646 WTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKK----SPMMQVHWLRVMLDEGHTLGS 701
           +  + K +   L+  Y VVIT++N+L+ E G+ K      P+M   W RV+LDEGH + +
Sbjct: 406 YHGNNKATKSELS-QYQVVITSYNKLATEGGKDKIETPLGPLMATDWRRVVLDEGHIIRN 464

Query: 702 SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
           +   T     A  L A +RW+LTGTP  N     +   Q +L+FL      +    +   
Sbjct: 465 A--KTKAAVAARRLKAQSRWVLTGTPIINN----IKDFQSLLQFLSITGGVEQPAIFTTV 518

Query: 762 ILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPL 798
           I RP  A+  E    LLQLL R +   RK D++ + L
Sbjct: 519 ISRPL-AQGNEKAETLLQLLMRDLCLRRKKDMKFVDL 554


>gi|380491120|emb|CCF35545.1| SNF2 family DNA-dependent ATPase [Colletotrichum higginsianum]
          Length = 734

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 13/210 (6%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           ++ TL+V P   V +W+ QI+QH+ PGQL  +++    +        ++D+VITT+  +S
Sbjct: 148 TKTTLLVCPLSTVTNWEEQIKQHIAPGQLSYYIYHGSNRIKDVEKLAEFDLVITTYGSVS 207

Query: 673 AEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
           +E G R K      P+ ++ W R++LDE H +     L  + +  + L A+ RW +TGTP
Sbjct: 208 SELGARSKRKSGKFPLEEIGWFRIVLDEAHMIREVATL--QFKAIVRLQAARRWAVTGTP 265

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
             N    +L  L  +L+F+  + +    K ++  I+ PF+A   E   +L  L+    + 
Sbjct: 266 VQN----RLEDLAALLQFIRLKPFDDRNK-FNRFIVDPFKACDTEIVPKLRVLVDSVTLR 320

Query: 788 ARKTDLQTIPLCIKEVTFLNFTEEHAGTYN 817
            R  D   +P     +  L+FT E    Y+
Sbjct: 321 -RLKDKINLPPRSDHLIKLDFTAEEREVYD 349



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 7/164 (4%)

Query: 964  SYRQWSNTNT---FLKQDLYRPNLESNK---ALPDKVIIFSQFLEHIHVIEQQLTVAGIK 1017
            S+ ++S  +T    L +DL +   +S+      P K ++FS +  H+ +I+  L   G+K
Sbjct: 544  SFGKYSGPHTKTRALVEDLLKSKGDSDANPHEAPHKSVVFSTWTSHLDLIQMALDNVGLK 603

Query: 1018 FAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSME 1076
            +  +   M    + +++D FR D S   +L+  +A  LGL+L+  + V++MEP ++ + E
Sbjct: 604  YVRLDGSMTRIARTQAMDSFREDDSVHVILVSITAGGLGLNLTAGSNVYVMEPQYNPAAE 663

Query: 1077 EQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRL 1120
             Q I R HR+G  RP+      MR + EE+MLE  +  ++   L
Sbjct: 664  AQAIDRVHRLGQKRPVRTVRYIMRNSFEEKMLELQEKKNKLASL 707


>gi|452986329|gb|EME86085.1| hypothetical protein MYCFIDRAFT_206697 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 2069

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 130/293 (44%), Gaps = 26/293 (8%)

Query: 537 LSEMETTGLASPILGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAA 596
           ++  E T    P+ G   A +  G  K      LI        R+        + FDL  
Sbjct: 596 ITGQEVTEKPKPVQGGILA-DMMGLGKTLSVLALIAETRTAAIRFRQ----QAVPFDLE- 649

Query: 597 LRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHS 656
                    D+V    S+ TLI+ P  ++ +W+ QI  H R G++ ++ +    +    +
Sbjct: 650 ---------DAVECN-SKGTLIICPKSVLSNWEEQIGVHCREGKIKVYCYHGPNRTQNTA 699

Query: 657 LAWDYDVVITTFNRLSAEW--GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
               +DVV+TT+N  +AE+  G +KK  +  ++W R++LDE H + ++    +K     +
Sbjct: 700 KLAKFDVVLTTYNIAAAEFADGMKKKKALSNINWFRIVLDEAHQIRTTSTKVSK--ACCN 757

Query: 715 LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGR 774
           L A  RW +TGTP  N+    LS L  ++KFL+   +  N   W+  I+ PF+    +  
Sbjct: 758 LYAERRWAVTGTPVQNS----LSDLGALVKFLNIPPF-DNPNTWNQYIMSPFKMGNVDVV 812

Query: 775 SRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI 827
            + LQLL   +   R  D   +    + +  L FTE     Y +   T R  +
Sbjct: 813 EQ-LQLLVGSITLRRLKDTIGLTKRTETIERLEFTEVEMALYKKFASTCRTTL 864



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/131 (21%), Positives = 70/131 (53%), Gaps = 1/131 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P + ++FS +  ++ +IE  L    + F  +   M    + + ++MF+ +   + +L+  
Sbjct: 1103 PIRSVVFSGWTGYLDLIEHALIKNRVAFVRLDGSMSVKQRTQVMEMFKTEKDVVVMLVSI 1162

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +   GL+ +   +V++MEP ++  +E Q + R HR+G  R ++++   M+ ++EE +L 
Sbjct: 1163 KAGGQGLNFTAANKVYVMEPQFNPGVEAQAVDRVHRLGQKRDVYIKHYIMQDSIEEGILG 1222

Query: 1110 FLQDTDRCRRL 1120
              +  ++  ++
Sbjct: 1223 LQEKKNKLAQM 1233


>gi|297837353|ref|XP_002886558.1| hypothetical protein ARALYDRAFT_475211 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297332399|gb|EFH62817.1| hypothetical protein ARALYDRAFT_475211 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1281

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 157/755 (20%), Positives = 280/755 (37%), Gaps = 179/755 (23%)

Query: 525  ALTWLAKLSPDELSEMETTGLASPILGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYYP 584
            AL+W+A        + ET+G   P  G   A + QG  K      LI + E+        
Sbjct: 563  ALSWMA--------QKETSGF--PCSGGILA-DDQGLGKTVSTIALILK-ERSKPAQTCE 610

Query: 585  KTLDNLAFDLAALRLALCEPLDS--------------------------VRLYLSRATLI 618
            +++    FDL +     C PL +                          VR   +  TL+
Sbjct: 611  ESMKKEIFDLES-ESGECAPLKTSGKSEHFEHSQLLSNENKVGRDSVGKVRGRPAAGTLV 669

Query: 619  VVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW-- 675
            V P+ ++  W  ++ + V     L + V+    +         YDVV+TTF+ +S E   
Sbjct: 670  VCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDPYELAKYDVVVTTFSIVSMEVPK 729

Query: 676  --------------------------GRRKK--------------------SPMMQVHWL 689
                                       +++K                     P+ +V W 
Sbjct: 730  QPLVDDEDEEKDGVQDGGTAATGFCSNKKRKYPPDSKKRGSKKKKQVEFLSGPLAKVSWF 789

Query: 690  RVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHE 748
            RV+LDE  ++    N   ++  A   L A  RW L+GTP  N+    +  L    +FL  
Sbjct: 790  RVVLDEAQSIK---NYKTQVARACWGLRAKRRWCLSGTPIQNS----IDDLYSYFRFLKY 842

Query: 749  EAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD------LQTIPLCIKE 802
            + Y  +   +   I  P      +G  +L  +L   M+   K        + ++P    E
Sbjct: 843  DPYS-SYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSFLDGKPIISLPPKSIE 901

Query: 803  VTFLNFTEEHAGTYNELVVTVR---RNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRL 859
            +  ++FT E    Y++L    R   R    A     ++V  LL           +  LR 
Sbjct: 902  LRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILL----------MLLRLRQ 951

Query: 860  SC----CVAGHIKVT------DAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL 909
            +C     V G    T       A + IQ    + +  G+   + E A +        +  
Sbjct: 952  ACDHPLLVNGEYSFTWESSVGLAKKQIQSEASLAI-CGICNDAPEDAVV--------SVC 1002

Query: 910  RHILCLDCV----AMDSEKCSLPGCGFLYEMQSPEILTRPENPNP--------------- 950
             H+ C  C+      D+  C L  C     + S    TR ++  P               
Sbjct: 1003 GHVFCKQCIYERLTGDNNHCPLANCNVRLTISSLSSKTRSDDAMPDMQDRAASNSLSPCS 1062

Query: 951  ---------KWPVPQDLIELQPSYRQWSNTNTFLKQDLYRP-------NLESNKALP--- 991
                     K     ++++  P  +  ++TN   +   Y         N   +  +P   
Sbjct: 1063 DEDLPYGSSKIKAALEILQSLPKPQDLTDTNQISQNSEYSSLPVTPVKNEGISVVVPVKV 1122

Query: 992  --DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
              +K I+FSQ+ + + ++E  L  + I++  +   M  + + K++  F        ++M 
Sbjct: 1123 AGEKAIVFSQWTKMLDLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVMIMS 1182

Query: 1050 -GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +ASLGL++     V +++  W+ + E+Q I RAHR+G TRP+ V    ++ TVE+++L
Sbjct: 1183 LKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRIL 1242

Query: 1109 EFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFA 1143
               Q   + R ++     + E+   +SH T+ D +
Sbjct: 1243 ALQQ---KKRMMVASAFGEDEKGSRQSHLTVEDLS 1274


>gi|83766966|dbj|BAE57106.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1157

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 20/191 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           LS++TL+V P  L+  W+++I   V    +L + V+  + +  A     DYDVVITT+  
Sbjct: 439 LSKSTLVVAPLALIKQWESEIADKVEASHRLRVCVYHGNTRTKATDNLEDYDVVITTYGT 498

Query: 671 LSAEWG----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           L++E G    + KKS +  V+W R++LDE HT+ +        Q A +L A  RW L+GT
Sbjct: 499 LTSEHGAIDKKNKKSGIFSVYWYRIILDEAHTIKN--RNAKATQSACALDAEYRWCLSGT 556

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLH 782
           P  N     L  LQ ++KFL  + Y  +  AW   I +P    +  GR  L    LQ++ 
Sbjct: 557 PMQNN----LDELQSLIKFLRIKPY-NDLAAWKEQITKP----LANGRGALAIERLQVVL 607

Query: 783 RCMISARKTDL 793
           +  +  R  D+
Sbjct: 608 KAFMKRRTKDV 618



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 20/164 (12%)

Query: 972  NTFLKQDLY-RPNLESNKALPD-----------------KVIIFSQFLEHIHVIEQQLTV 1013
            N   + D+Y  P  E N+ LP                  K I+FS F   +  IE  L  
Sbjct: 896  NESDEDDIYLNPGDEDNQVLPSTKIRHLMKILRRESSDYKFIVFSVFTSMLDKIEPFLQR 955

Query: 1014 AGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWD 1072
            AGI FA     M +  +  SL+  R+++    LL    + +LGL+L+  +RV ++EP W+
Sbjct: 956  AGIGFARYDGGMRNDLREASLNKLRNNSGTRVLLCSLRAGALGLNLTAASRVVILEPFWN 1015

Query: 1073 RSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
              +EEQ I R HR+  T  + +  L ++ TVEE++++ LQ+  R
Sbjct: 1016 PFVEEQAIDRVHRLNQTVDVKIYKLIIKDTVEERIID-LQERKR 1058


>gi|391863895|gb|EIT73194.1| helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box
           superfamily [Aspergillus oryzae 3.042]
          Length = 1156

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 20/191 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           LS++TL+V P  L+  W+++I   V    +L + V+  + +  A     DYDVVITT+  
Sbjct: 438 LSKSTLVVAPLALIKQWESEIADKVEASHRLRVCVYHGNTRTKATDNLEDYDVVITTYGT 497

Query: 671 LSAEWG----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           L++E G    + KKS +  V+W R++LDE HT+ +        Q A +L A  RW L+GT
Sbjct: 498 LTSEHGAIDKKNKKSGIFSVYWYRIILDEAHTIKN--RNAKATQSACALDAEYRWCLSGT 555

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLH 782
           P  N     L  LQ ++KFL  + Y  +  AW   I +P    +  GR  L    LQ++ 
Sbjct: 556 PMQNN----LDELQSLIKFLRIKPY-NDLAAWKEQITKP----LANGRGALAIERLQVVL 606

Query: 783 RCMISARKTDL 793
           +  +  R  D+
Sbjct: 607 KAFMKRRTKDV 617



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 20/164 (12%)

Query: 972  NTFLKQDLY-RPNLESNKALPD-----------------KVIIFSQFLEHIHVIEQQLTV 1013
            N   + D+Y  P  E N+ LP                  K I+FS F   +  IE  L  
Sbjct: 895  NESDEDDIYLNPGDEDNQVLPSTKIRHLMKILRRESSDYKFIVFSVFTSMLDKIEPFLQR 954

Query: 1014 AGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWD 1072
            AGI FA     M +  +  SL+  R+++    LL    + +LGL+L+  +RV ++EP W+
Sbjct: 955  AGIGFARYDGGMRNDLREASLNKLRNNSGTRVLLCSLRAGALGLNLTAASRVVILEPFWN 1014

Query: 1073 RSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
              +EEQ I R HR+  T  + +  L ++ TVEE++++ LQ+  R
Sbjct: 1015 PFVEEQAIDRVHRLNQTVDVKIYKLIIKDTVEERIID-LQERKR 1057


>gi|291239296|ref|XP_002739559.1| PREDICTED: Lodestar protein-like [Saccoglossus kowalevskii]
          Length = 1134

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 111/533 (20%), Positives = 220/533 (41%), Gaps = 61/533 (11%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            S  TL++ P+ L+  WK + +     G+L ++V+    +         YD++ TT+N + 
Sbjct: 595  SLCTLVICPASLMHQWKKEAENRCTAGKLKMYVYHGQNREKNVKKLASYDIIFTTYNIIG 654

Query: 673  AEWGRRKK--------------------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
             E    K+                    + ++++ W R++LDE HT+ +     +K QMA
Sbjct: 655  KEVPVSKEDKADTKVEDGLKLSEKLSDNTTLLKIAWERIILDEAHTIKN-----HKSQMA 709

Query: 713  IS---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE 769
             +   L A +RW +TGTP  N    QLS +  +L+FL    + + Q  W     R  E +
Sbjct: 710  KAVCRLRARSRWAVTGTPIQN----QLSDMYSLLRFLRCSPFDELQ-VWK----RWVENK 760

Query: 770  MEEGRSRLLQLLHRCMISARKTD-------LQTIPLCIKEVTFLNFTEEHAGTYNELVVT 822
               G +RL  ++   ++   K D       L ++P    +   +         Y+ L   
Sbjct: 761  GTAGSARLNTIVKSLLLRRTKEDKGKTGKPLVSLPDKESQTHEVELGPGEREVYDALFKQ 820

Query: 823  VRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDV 882
             + N +   +      E  +         +T++N       +     TD G+     + +
Sbjct: 821  SQSNFV--SYLKQHDAEGAVKLGAVGESGSTLQNSN-----SNPFTKTDGGDTT--GIKI 871

Query: 883  LVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEIL 942
            ++ N   P +Q  A +   LL    C  H+  L   A+D E C   G       Q  ++ 
Sbjct: 872  IMPNA-KPGTQNMAHVLVWLLRLRQCCGHLSLLK-EAVDIESCYSDGVDLSLVDQMKDLC 929

Query: 943  TRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQ---DLYRPNLESNKALPDKVIIFSQ 999
                 P     +   +++ +    + S  +T +K+    L     +S    P K +I SQ
Sbjct: 930  VDESKPIDS-EISSGIVKDKSLLFEVSAMSTKVKKVMDGLKDIRAKSPAGKPMKTVIVSQ 988

Query: 1000 FLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG--SASLGLD 1057
            + + + ++   L   G K+  +   +    + +S++ F  +     +++    +  +GL+
Sbjct: 989  WTKMLDIMVHHLKENGFKYCVIQGNVTPKARSESVENFNKNPKGPEVMLVSLRAGGVGLN 1048

Query: 1058 LSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            L     +FL++  W+ ++E+Q   R +R+G  + + +     + TVEE++LE 
Sbjct: 1049 LIGGNHLFLLDMHWNPALEQQACDRIYRVGQEKEVFIHKFVCKNTVEEKILEL 1101


>gi|238501732|ref|XP_002382100.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357]
 gi|220692337|gb|EED48684.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357]
          Length = 1158

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 20/191 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           LS++TL+V P  L+  W+++I   V    +L + V+  + +  A     DYDVVITT+  
Sbjct: 440 LSKSTLVVAPLALIKQWESEIADKVEASHRLRVCVYHGNTRTKATDNLEDYDVVITTYGT 499

Query: 671 LSAEWG----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           L++E G    + KKS +  V+W R++LDE HT+ +        Q A +L A  RW L+GT
Sbjct: 500 LTSEHGAIDKKNKKSGIFSVYWYRIILDEAHTIKN--RNAKATQSACALDAEYRWCLSGT 557

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLH 782
           P  N     L  LQ ++KFL  + Y  +  AW   I +P    +  GR  L    LQ++ 
Sbjct: 558 PMQNN----LDELQSLIKFLRIKPY-NDLAAWKEQITKP----LANGRGALAIERLQVVL 608

Query: 783 RCMISARKTDL 793
           +  +  R  D+
Sbjct: 609 KAFMKRRTKDV 619



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 20/164 (12%)

Query: 972  NTFLKQDLY-RPNLESNKALPD-----------------KVIIFSQFLEHIHVIEQQLTV 1013
            N   + D+Y  P  E N+ LP                  K I+FS F   +  IE  L  
Sbjct: 897  NESDEDDIYLNPGDEDNQVLPSTKIRHLMKILRRESSDYKFIVFSVFTSMLDKIEPFLQR 956

Query: 1014 AGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWD 1072
            AGI FA     M +  +  SL+  R+++    LL    + +LGL+L+  +RV ++EP W+
Sbjct: 957  AGIGFARYDGGMRNDLREASLNKLRNNSGTRVLLCSLRAGALGLNLTAASRVVILEPFWN 1016

Query: 1073 RSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
              +EEQ I R HR+  T  + +  L ++ TVEE++++ LQ+  R
Sbjct: 1017 PFVEEQAIDRVHRLNQTVDVKIYKLIIKDTVEERIID-LQERKR 1059


>gi|308483748|ref|XP_003104075.1| hypothetical protein CRE_01100 [Caenorhabditis remanei]
 gi|308258383|gb|EFP02336.1| hypothetical protein CRE_01100 [Caenorhabditis remanei]
          Length = 1083

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 129/569 (22%), Positives = 246/569 (43%), Gaps = 120/569 (21%)

Query: 610  LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA--HSLAWDYDVVITT 667
            L+ S ATLI+ P+ L+  W+ +I + +   +L +F++   KK  A    +   YDVVITT
Sbjct: 525  LFPSNATLIIAPASLIHQWEAEIDRRLEEDELSVFMFHGTKKQRAIEPKILARYDVVITT 584

Query: 668  FNRLSAEWGRRKK--------------------------SPMMQVHWLRVMLDEGHTLGS 701
            +   + E   +KK                          SP+ Q+ W RV+LDE H + +
Sbjct: 585  YTLAANELIGKKKAGAKEESDSDVSDDESRRRRRTFKGDSPLAQIGWSRVILDEAHAIKN 644

Query: 702  SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
             L+  +K      L A +RW L+GTP  N     L  L  ++KFL    +  ++K W   
Sbjct: 645  RLSQCSK--AVCCLAAFSRWCLSGTPIHNN----LWDLYSLVKFLRIPLFS-DRKYWAES 697

Query: 762  ILRPFEAEMEEGRSRLLQ---LLHR-----CMISARKTDLQTIPLCIKEVTFLNFTEEHA 813
            I+ P +  M + R  LL    LL R     C ++ +K  +   P  +K V  L  T + A
Sbjct: 698  IM-PMKTVMAD-RVNLLSKNLLLRRTKDQTCSVTNKKI-VNLEPKTVK-VHELEMTGDEA 753

Query: 814  GTYNELVVTVRRNI--LMADWNDPSHV-------------ESLLNPKQW---------KF 849
              Y+ ++   ++ +  ++A+ +D +                 +LNP  +         KF
Sbjct: 754  NGYSIMMEGAQKLVKQIVANTDDVNMYGFVRRRRQRGAAENEMLNPYNFGPRNLATNSKF 813

Query: 850  RSTT-----IRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLN 904
            ++ +     +  LR +C    H  +T +G D+                   AF     +N
Sbjct: 814  QNMSCILLLLMRLRQACV---HFSITKSGMDLD------------------AF----QIN 848

Query: 905  GGNCLRHILCL-DCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQP 963
            GG+    +  L D +     + +L         Q  E++ + E+P          +  +P
Sbjct: 849  GGDDDVDMNELEDLMEKTMAELTLDDGSDEDGSQKQEMIPKKESPT---------VIFEP 899

Query: 964  SYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYS 1023
             Y       T    ++ R  L+      +KV+I SQ+   ++++E+ +   G  +  +  
Sbjct: 900  HYISCKMHKTL---EIVRDILDRK----EKVVIVSQWTSVLNLVEKHIQNGGHNYTSITG 952

Query: 1024 PMHSSNKIKSLDMFRHD--ASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVIS 1081
             +   ++ + +D F  +   + + LL   +  +GL+L     + +++  W+ ++E+Q   
Sbjct: 953  QVLVKDRQERVDSFNQEKGGAQVMLLSLTAGGVGLNLVGGNHLIMIDLHWNPALEQQACD 1012

Query: 1082 RAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            R +RMG  +P+H+  L ++GT+E+++++ 
Sbjct: 1013 RIYRMGQKKPVHIHRLVVKGTIEQRVMDL 1041


>gi|453087710|gb|EMF15751.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
          Length = 1082

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 119/249 (47%), Gaps = 20/249 (8%)

Query: 585 KTLDNLAFDLA----ALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQ 640
           KTL  LA   A    A R     P D      +R TLI+ P  ++ +W+ QI QH  P  
Sbjct: 452 KTLSILALIAATKSDAARFRQERPDDDDVDRNARGTLIICPKSVLSNWQEQIIQHTVPKS 511

Query: 641 LHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW--GRRKKSPMMQVHWLRVMLDEGHT 698
           + ++ +    +    S    YDVV+T++N  +AE   G R +  + +++W R++LDEGH 
Sbjct: 512 ITVYAYHGSNRMQDTSKLSRYDVVLTSYNTAAAELQDGNRVRKALSRLNWFRIVLDEGHQ 571

Query: 699 LGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKA 757
           + +    T K+  A  +L A  RW +TGTP  N+    L  L  ++KFL  +     Q  
Sbjct: 572 IRTQ---TTKVSKACCALYAQRRWAVTGTPVQNS----LYDLGALIKFLRIQPLDHPQ-T 623

Query: 758 WDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIK--EVTFLNFTEEHAGT 815
           W   I+ PF+   + G  + LQLL   +   R    +TI L  +  E+T L+F+E     
Sbjct: 624 WTQYIMSPFK-NGDTGVIQQLQLLVSSITLRRGK--KTIGLLERNEEITRLDFSESEKFL 680

Query: 816 YNELVVTVR 824
           Y     T R
Sbjct: 681 YKAFATTCR 689



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 75/142 (52%), Gaps = 7/142 (4%)

Query: 975  LKQDLYRPNLESNKALPD-----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSN 1029
            L  DL    +E+N ALP      + ++FS +  ++ +IE  L    I +A +   M    
Sbjct: 908  LLHDLEESAIETN-ALPPGEPPIRSVVFSGWTAYLDLIEFALKSRNIGYARLDGSMSIKQ 966

Query: 1030 KIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGA 1088
            + +++D F+ D   + +L+   +   GL+ +   + ++MEP ++  +E Q + R HR+G 
Sbjct: 967  RTQAMDTFKTDDRVVVMLVSIKAGGQGLNFTAANKCYVMEPQFNPGVEAQAVDRVHRLGQ 1026

Query: 1089 TRPIHVETLAMRGTVEEQMLEF 1110
            TRP+ ++   M  +VEE +L+ 
Sbjct: 1027 TRPVFIKHFIMNDSVEEGILKL 1048


>gi|317142811|ref|XP_001819108.2| SNF2 family helicase/ATPase [Aspergillus oryzae RIB40]
          Length = 1137

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 20/191 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           LS++TL+V P  L+  W+++I   V    +L + V+  + +  A     DYDVVITT+  
Sbjct: 419 LSKSTLVVAPLALIKQWESEIADKVEASHRLRVCVYHGNTRTKATDNLEDYDVVITTYGT 478

Query: 671 LSAEWG----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           L++E G    + KKS +  V+W R++LDE HT+ +        Q A +L A  RW L+GT
Sbjct: 479 LTSEHGAIDKKNKKSGIFSVYWYRIILDEAHTIKN--RNAKATQSACALDAEYRWCLSGT 536

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLH 782
           P  N     L  LQ ++KFL  + Y  +  AW   I +P    +  GR  L    LQ++ 
Sbjct: 537 PMQNN----LDELQSLIKFLRIKPY-NDLAAWKEQITKP----LANGRGALAIERLQVVL 587

Query: 783 RCMISARKTDL 793
           +  +  R  D+
Sbjct: 588 KAFMKRRTKDV 598



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 20/164 (12%)

Query: 972  NTFLKQDLY-RPNLESNKALPD-----------------KVIIFSQFLEHIHVIEQQLTV 1013
            N   + D+Y  P  E N+ LP                  K I+FS F   +  IE  L  
Sbjct: 876  NESDEDDIYLNPGDEDNQVLPSTKIRHLMKILRRESSDYKFIVFSVFTSMLDKIEPFLQR 935

Query: 1014 AGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWD 1072
            AGI FA     M +  +  SL+  R+++    LL    + +LGL+L+  +RV ++EP W+
Sbjct: 936  AGIGFARYDGGMRNDLREASLNKLRNNSGTRVLLCSLRAGALGLNLTAASRVVILEPFWN 995

Query: 1073 RSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
              +EEQ I R HR+  T  + +  L ++ TVEE++++ LQ+  R
Sbjct: 996  PFVEEQAIDRVHRLNQTVDVKIYKLIIKDTVEERIID-LQERKR 1038


>gi|440900811|gb|ELR51862.1| Transcription termination factor 2 [Bos grunniens mutus]
          Length = 1163

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 129/552 (23%), Positives = 231/552 (41%), Gaps = 78/552 (14%)

Query: 611  YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
            + S  TLI+ P+ L+ HWK ++++HV   +L + ++    +     +   YD+VITT++ 
Sbjct: 640  FTSHGTLIICPASLIHHWKNEVEKHVSHNRLRVCLYHGPNRNQHAKVLSTYDIVITTYSL 699

Query: 671  LSAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-S 714
            L+ E    K+               SP+++V W R++LDE H +    N   +  MA+  
Sbjct: 700  LAKEIPTAKQDEQIPGANPSVEGTSSPLLRVVWARLILDEAHNVK---NPRVQTSMAVCK 756

Query: 715  LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGR 774
            L A  RW +TGTP  N     L  +  +LKFL    + +  K W   +    +   ++G 
Sbjct: 757  LQAQARWAVTGTPIQNN----LLDMYSLLKFLRCSPFDEF-KLWKSQV----DNGSKKGG 807

Query: 775  SRLLQLLHRCMISARKTD--------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRN 826
             R L +L R ++  R  D        L  +P    ++  L  +E+    Y+ L     R+
Sbjct: 808  ER-LNILTRSLLLRRTKDQLDSTGKPLVVLPHRKFQLHHLKLSEDEETVYSVLFA---RS 863

Query: 827  ILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVEN 886
             L   +    H ES  N +  +        +      +G    T   +    T+ +L + 
Sbjct: 864  RLALQYYLKRH-ESGSN-QSGRSPDNPFNRVAQEFGSSGPGPSTAGSQATSSTVHILSQ- 920

Query: 887  GLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQ-SPEILTRP 945
                           LL    C  H+  L   A+D  +    G     E Q S   L+  
Sbjct: 921  ---------------LLRLRQCCCHLSLLKS-ALDPTELKSEGLALSLEEQLSALTLSEF 964

Query: 946  ENPNPKWPVPQD----LIELQPSYRQWSNTNTFLKQ-DLYRPNLESNKALPDKVIIFSQF 1000
             +  P   V  +     +EL    R+ +  ++ L + +  R N  S K+     +I SQ+
Sbjct: 965  HDSEPSASVSLNGKSFKVELFDDKRESTKISSLLAELEAVRRNSGSQKS-----VIVSQW 1019

Query: 1001 LEHIHVIEQQLTVAGIKFA---GMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLD 1057
               + V+   L   G  +A   G  +P    + +++ +  R     L  L+ G   +GL+
Sbjct: 1020 TSMLKVVALHLKRCGFTYATIDGSVNPKQRMDLVEAFNSPRGPQVMLISLLAG--GVGLN 1077

Query: 1058 LSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ-DTDR 1116
            L+    +FL++  W+ S+E+Q   R +R+G  + + +       TVEE++L+  +   D 
Sbjct: 1078 LTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHKFVCEETVEEKILQLQEKKKDL 1137

Query: 1117 CRRLL--KEELV 1126
             +++L   EE V
Sbjct: 1138 AKQILSGSEEFV 1149


>gi|348538356|ref|XP_003456658.1| PREDICTED: transcription termination factor 2-like [Oreochromis
           niloticus]
          Length = 1105

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 36/242 (14%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           L LS+ TLI+ P+ LV HWK +I++HV+ G+L ++++    +  +  +  +YDVV+TT++
Sbjct: 572 LVLSKGTLIICPASLVHHWKKEIERHVKTGKLTVYLYHGPNRERSARVLANYDVVVTTYS 631

Query: 670 RLSAEWGRRKK----------------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI 713
            +S E   +K+                +P+++V W R++LDE H++    N   +  MA+
Sbjct: 632 LVSKEIPVQKEEADKPNPDKDDVRPGSAPLLRVSWARIILDEAHSIK---NPKVQTSMAV 688

Query: 714 -SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEE 772
             L A  RW +TGTP  N     L  +  +LKFL    + +  K W   +    +   + 
Sbjct: 689 CQLRAGARWAVTGTPIQNN----LLDMYSLLKFLRCSPFDE-YKLWKAQV----DNGSKR 739

Query: 773 GRSRL-------LQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRR 825
           GR RL       L    +  + A+   L ++P    EV  L  +E+    Y+ L    R 
Sbjct: 740 GRERLNILTRTLLLRRTKDQLDAKGKPLVSLPDRTSEVHRLKLSEDEQAVYDVLFAQSRS 799

Query: 826 NI 827
            +
Sbjct: 800 TL 801



 Score = 43.1 bits (100), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 22/117 (18%), Positives = 59/117 (50%), Gaps = 2/117 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-- 1050
            K +I SQ+   + ++   L + G+ ++ +   ++   ++  ++ F  +     +++    
Sbjct: 953  KSVIVSQWTSMLQIVAVHLQLMGLTYSVIDGTVNPKRRMDLVEEFNTNPKGPQVMLVSLC 1012

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            +  +GL+L     +FL++  W+ ++E+Q   R +R+G  + + +       TVEE++
Sbjct: 1013 AGGVGLNLIGGNHLFLIDMHWNPALEDQACDRIYRVGQCKDVTIHRFVCENTVEEKI 1069


>gi|119470473|ref|XP_001258040.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL
           181]
 gi|119406192|gb|EAW16143.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL
           181]
          Length = 1148

 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 20/191 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           LS++TL+V P  L+  W+++I   V    +L + V+  + +  A      YDVVITT+  
Sbjct: 427 LSKSTLVVAPLALIKQWESEIATKVEDSHKLRVCVYHGNTRAKATDSLDAYDVVITTYGT 486

Query: 671 LSAEWG----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           L++E+G     +KKS +  V+W R++LDE HT+ +        Q A +L A  RW L+GT
Sbjct: 487 LTSEYGAVDKNKKKSGLFSVYWYRIVLDEAHTIKN--RNAKATQSACALDAEYRWCLSGT 544

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLH 782
           P  N     L  LQ ++KFL  + Y  +  AW   I RP    +  GR  L    LQ+  
Sbjct: 545 PMQNN----LDELQSLIKFLRIKPY-NDLAAWKDQITRP----LANGRGALAIERLQVYL 595

Query: 783 RCMISARKTDL 793
           +  +  R  D+
Sbjct: 596 KAFMKRRTKDV 606



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L  AGI FA     M +  +  SLD  RH+++   LL    +
Sbjct: 928  KFIVFSVFTSMLDKIEPFLKRAGIGFARYDGSMRNDLREASLDRLRHNSATRVLLCSLRA 987

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             +LGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  + ++ TVEE++LE L
Sbjct: 988  GALGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKMIIKDTVEERILE-L 1046

Query: 1112 QDTDR 1116
            QD  R
Sbjct: 1047 QDRKR 1051


>gi|302792356|ref|XP_002977944.1| hypothetical protein SELMODRAFT_408 [Selaginella moellendorffii]
 gi|300154647|gb|EFJ21282.1| hypothetical protein SELMODRAFT_408 [Selaginella moellendorffii]
          Length = 835

 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 18/213 (8%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
           ATL+V P  ++ +W  Q++ H R G L++ V+    +         +D+V TT+N L++E
Sbjct: 330 ATLVVCPLSVLSNWIGQLEDHTRAGSLNVCVFHGPDRIKNAKKLASHDLVFTTYNMLASE 389

Query: 675 WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
           W  R  S + +VHWLR++LDE H + +      + + AISL A  RW +TGTP  N    
Sbjct: 390 WNDRN-SALRKVHWLRLVLDEAHLVKNPK--AQQTKCAISLNADRRWAVTGTPIQNNAKD 446

Query: 735 QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT--- 791
             S    +++FLH E   + +  W+  I RP  +    G +R   L+    IS R+T   
Sbjct: 447 LFS----LMQFLHFEPLSE-RTFWNRTIQRPLTSGQPAGFARSQGLM--SAISLRRTKET 499

Query: 792 -----DLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
                 L  +P  I  V  ++ T      Y+++
Sbjct: 500 RVNGKKLVDLPPKIVTVFPVDLTPNDRAIYDKM 532



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 74/128 (57%), Gaps = 4/128 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR---HDASCLALLMD 1049
            K ++FSQF   + + E  LT AG KF  +   M +  + ++++ F+    D+  + LL  
Sbjct: 702  KTVVFSQFSSMLKLAEAPLTQAGYKFVKLQGGMSAKKRDEAMEAFKSRSKDSPTVFLLSL 761

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +A +GL+L   + V +++P W+ + EEQ + R HR+G TR +HV  L    ++EE++L+
Sbjct: 762  KAAGVGLNLVSASNVVMLDPWWNPAAEEQAMDRVHRLGQTRDVHVFRLVATDSIEERLLQ 821

Query: 1110 FLQDTDRC 1117
             +Q+  R 
Sbjct: 822  -MQEKKRA 828



 Score = 42.7 bits (99), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 9/97 (9%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDG---FYFYVNTVSGDIATGTAP 219
           +K +L  HQ+ A+ WM+ RE N+  L  P + ++    G      Y+NT++         
Sbjct: 185 VKSELMQHQKEALAWMIQRE-NSSAL--PPFWEIQPPKGSNTTTMYMNTLTNFTCDKRPE 241

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPP 256
            +R   GG+  D+ GLGKT+  L+L+   +     PP
Sbjct: 242 PLR---GGILADDMGLGKTLAVLALVATNRPGAVLPP 275


>gi|400595393|gb|EJP63194.1| RING-11 protein [Beauveria bassiana ARSEF 2860]
          Length = 1005

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 149/617 (24%), Positives = 259/617 (41%), Gaps = 131/617 (21%)

Query: 578  ITRWYYPKTLDNLAF-----------DLAALRLALCEPLDSVRLYLS-----RATLIVVP 621
            I+R   P  L+ LA+            L    + L + + +V L +S     + +L++VP
Sbjct: 398  ISRRLKPFQLEGLAWMKEMEKQEWGGGLLGDEMGLGKTIQAVSLIMSDYPAKQPSLVLVP 457

Query: 622  SYLVDHWKTQIQQHVRPGQLHLFVW----TDHKKPSAHSLAWDYDVVITTFNRLSA---- 673
               +  W+++I+ +   G L  FV+    T  K      L   YDV++ ++N L +    
Sbjct: 458  PVALMQWQSEIKSYT-DGTLKTFVFHGTNTKTKGIQVKDLK-KYDVIMMSYNSLESMYRK 515

Query: 674  -EWGRRKKSPMMQ-------VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTG 725
             E G ++K  + +       +++ R++LDE H + +   +T K   A  L  + RW LTG
Sbjct: 516  QERGFKRKEGLYKEESVIHAINFHRIILDEAHCIKTRTTMTAKACFA--LKTNYRWCLTG 573

Query: 726  TPTPNTPNSQLS-----HLQPMLKFLHEE-------------------AYG--QNQKAWD 759
            TP  N      S     +++P   +L ++                    +G  Q+   ++
Sbjct: 574  TPLQNRIGEFFSLIRFLNIKPFASYLCKQCPCSTLEWSMDVDHRCKSCGHGGMQHVSVFN 633

Query: 760  GGILRPFE--AEMEEGRS--RLLQLL-HRCMISARKTD-LQTIPLCIKEVTFLN---FTE 810
              +L P +       GR   R L+L+  R M+   K D    + L +KE+ F+N   F E
Sbjct: 634  QELLNPIQKFGNFGPGREAFRKLRLMTKRIMLRRLKKDHTNAMELPVKEI-FVNRQFFGE 692

Query: 811  EHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVT 870
            E       ++   RR      ++   H   LLN     F    I  +R    VA H  + 
Sbjct: 693  EENDFAGSIMTNGRRK-----FDTYVHQNILLNNYANIF--GLIMQMRQ---VADHPDLL 742

Query: 871  DAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAM--------DS 922
               ++ +   +VLV    D  S++    +          +H  C  CVA         D 
Sbjct: 743  -LKKNAEGGQNVLVCCICDEPSEDTVRSR---------CKHDFCRACVASYIHSTDEPDC 792

Query: 923  EKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPS-------YRQWSNTNT-- 973
             +C +P      +++ PEI              QDL  ++ S          W++++   
Sbjct: 793  PRCHIP---LSIDLEQPEI-------------EQDLSMVKKSSIINRIKMENWTSSSKIE 836

Query: 974  FLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKS 1033
             L  +L++  L SN A   K IIFSQF   + ++E +L  AGI    +   M  + +  S
Sbjct: 837  LLVHELHK--LRSNNA-SHKSIIFSQFTTMLQLVEWRLRRAGITTVMLDGSMTPAQRQAS 893

Query: 1034 LDMFRH--DASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRP 1091
            ++ F    D  C  L+   +  + L+L+  +RVF+++P W+ + E Q   R HR+G TRP
Sbjct: 894  IEHFMTNVDVECF-LVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQTRP 952

Query: 1092 IHVETLAMRGTVEEQML 1108
              +  L +  +VE +M+
Sbjct: 953  CTITRLCIEDSVESRMV 969


>gi|115400547|ref|XP_001215862.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114191528|gb|EAU33228.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1087

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 120/248 (48%), Gaps = 33/248 (13%)

Query: 560 GFHKIFQAFGLI---RRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRL--YLSR 614
           G  K  QA  L+   R+   G  R   P++ D    D      ++ E  DS +L   LS+
Sbjct: 323 GLGKTVQAIALMLTNRKRADG--RRRAPESDDEGEDD------SVNENKDSSKLPPGLSK 374

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           +TL+V P  L+  W+++I   V P  +L + V+    +  A     DYDVVITT+  L++
Sbjct: 375 STLVVAPLALIKQWESEILAKVEPSHKLRVCVYHGATRAKATDRLEDYDVVITTYGTLTS 434

Query: 674 EWGRRKK----SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP 729
           E G  +K    S +  V+W R++LDE HT+ +        Q A +L A  RW L+GTP  
Sbjct: 435 EHGASEKSNKTSGLFSVYWYRIILDEAHTIKN--RNAKATQSAYALDAEYRWCLSGTPMQ 492

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLHRCM 785
           N     L  LQ ++KFL  + +  +  AW   I +P    +  GR  L    LQ++ +  
Sbjct: 493 NN----LDELQSLIKFLRIKPF-NDLAAWKDQITKP----LANGRGGLAIERLQVVLKAF 543

Query: 786 ISARKTDL 793
           +  R  D+
Sbjct: 544 MKRRTKDV 551



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L  AGI FA     M +  +  SL+  R+++    LL    +
Sbjct: 865  KFIVFSVFTSMLDKIEPFLKRAGIGFARYDGGMRNDLREASLNKLRNNSGTRVLLCSLRA 924

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             +LGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  L ++ TVEE++L+ L
Sbjct: 925  GALGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTLDVKIYKLIIKDTVEERILD-L 983

Query: 1112 QDTDR 1116
            QD  R
Sbjct: 984  QDRKR 988


>gi|302810562|ref|XP_002986972.1| hypothetical protein SELMODRAFT_40849 [Selaginella moellendorffii]
 gi|300145377|gb|EFJ12054.1| hypothetical protein SELMODRAFT_40849 [Selaginella moellendorffii]
          Length = 849

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 18/213 (8%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
           ATL+V P  ++ +W  Q++ H R G L++ V+    +         +D+V TT+N L++E
Sbjct: 327 ATLVVCPLSVLSNWIGQLEDHTRAGSLNVCVFHGPDRIKNAKKLASHDLVFTTYNMLASE 386

Query: 675 WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
           W  R  S + +V WLR++LDE H + +      + + AISL A  RW +TGTP  N    
Sbjct: 387 WNDRN-SALRKVQWLRLVLDEAHLVKNPK--AQQTKCAISLNADRRWAVTGTPIQNNAKD 443

Query: 735 QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT--- 791
             S    +++FLH E   + +  W+  I RP  +    G +RL  L+    IS R+T   
Sbjct: 444 LFS----LMQFLHFEPLSE-RTFWNRTIQRPLTSGQPAGFARLQGLMS--AISLRRTKEA 496

Query: 792 -----DLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
                 L  +P  I  V  ++ T      Y+++
Sbjct: 497 RVNGKKLVDLPPKIVTVFPVDLTPNDRAIYDKM 529



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR---HDASCLALLMD 1049
            K ++FSQF   + + E  LT AG KF  +   M +  + ++++ F+    D+  + LL  
Sbjct: 697  KTVVFSQFSSMLKLAEAPLTQAGYKFVKLQGGMSAKKRDEAMEAFKSTSKDSPTVFLLSL 756

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +A +GL+L   + V +++P W+ + EEQ + R HR+G TR +HV  L    ++EE++L+
Sbjct: 757  KAAGVGLNLVSASNVVMLDPWWNPAAEEQAMDRVHRLGQTRDVHVFRLVATDSIEERLLQ 816

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 817  -MQEKKR 822



 Score = 42.7 bits (99), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 9/97 (9%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDG---FYFYVNTVSGDIATGTAP 219
           +K +L  HQ+ A+ WM+ RE N+  L  P + ++    G      Y+NT++         
Sbjct: 182 VKSELMQHQKEALAWMIQRE-NSSAL--PPFWEIQPPKGSNATTMYMNTLTNFTCDKRPE 238

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPP 256
            +R   GG+  D+ GLGKT+  L+L+   +     PP
Sbjct: 239 PLR---GGILADDMGLGKTLAVLALVATNRPGAVLPP 272


>gi|299756086|ref|XP_001829080.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130]
 gi|298411516|gb|EAU92715.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130]
          Length = 1494

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 71/118 (60%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  +E  L VAGI++  +   M    +IK++D  + D  C  LL+   +
Sbjct: 1111 KTVVFSQWTTMLDKVEDALEVAGIRYDRLDGTMKREERIKAMDALKFDPGCEVLLVSLKA 1170

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RV+LM+P W+ ++E Q + R HR+G TRP+    L + G++E ++LE
Sbjct: 1171 GGVGLNLTAAQRVYLMDPYWNPAVENQAVDRIHRLGQTRPVQTVKLIIEGSIEARLLE 1228


>gi|186492175|ref|NP_001117525.1| SNF2, helicase and zinc finger domain-containing protein [Arabidopsis
            thaliana]
 gi|332195667|gb|AEE33788.1| SNF2, helicase and zinc finger domain-containing protein [Arabidopsis
            thaliana]
          Length = 1122

 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 163/755 (21%), Positives = 280/755 (37%), Gaps = 180/755 (23%)

Query: 525  ALTWLAKLSPDELSEMETTGLASPILGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYYP 584
            AL+W+A        + ET+G   P  G   A + QG  K      LI + E+        
Sbjct: 405  ALSWMA--------QKETSGF--PCSGGILADD-QGLGKTVSTIALILK-ERSKPAQACE 452

Query: 585  KTLDNLAFDLAALRLALCEPL-----------------------DSVRLYLSR---ATLI 618
            ++     FDL +     C PL                       DSV     R    TL+
Sbjct: 453  ESTKKEIFDLES-ETGECAPLKPSGRSKHFEHSQLLSNENKVGGDSVGKVTGRPAAGTLV 511

Query: 619  VVPSYLVDHWKTQIQQHV-RPGQLHLFVW-TDHKKPSAHSLAWDYDVVITTFNRLSAEW- 675
            V P+ ++  W  ++ + V     L + V+    +    H LA  YDVV+TTF+ +S E  
Sbjct: 512  VCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDPHELA-KYDVVVTTFSIVSMEVP 570

Query: 676  ---------------------------GRRKK-------------------SPMMQVHWL 689
                                        +++K                    P+ +V W 
Sbjct: 571  KQPLVDDEDEEKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPLAKVSWF 630

Query: 690  RVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHE 748
            RV+LDE  ++    N   ++  A   L A  RW L+GTP  N+    +  L    +FL  
Sbjct: 631  RVVLDEAQSIK---NYKTQVARACWGLRAKRRWCLSGTPIQNS----IDDLYSYFRFLKY 683

Query: 749  EAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ------TIPLCIKE 802
            + Y  +   +   I  P      +G  +L  +L   M+   K  L       ++P    E
Sbjct: 684  DPYS-SYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIE 742

Query: 803  VTFLNFTEEHAGTYNELVVTVR---RNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRL 859
            +  ++FT E    Y++L    R   R    A     ++V  LL           +  LR 
Sbjct: 743  LRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILL----------MLLRLRQ 792

Query: 860  SC----CVAGHIKVT------DAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL 909
            +C     V G    T       A + IQ    + +  G+   + E A          +  
Sbjct: 793  ACDHPLLVNGEYSFTWESSVGLAKKQIQSDASLAI-CGICNDAPEDAV--------ASVC 843

Query: 910  RHILCLDCV----AMDSEKCSLPGCGFLYEMQSPEILTRPENPNP--------------- 950
             H+ C  C+      DS  C    C     + S    TR ++  P               
Sbjct: 844  GHVFCKQCIYERLTGDSNHCPFANCNVRLTISSLSSKTRLDDAMPDMQERATSNSLSPCS 903

Query: 951  ---------KWPVPQDLIELQPSYRQWSNTNTFLKQDLYR-------PNLESNKALPDKV 994
                     K     ++++  P     +++N   +   Y         N   +  +P KV
Sbjct: 904  DEDLPYGSSKIKAALEILQSLPKAHDLTDSNQISENREYSGLSITPVKNEGMSVDVPIKV 963

Query: 995  -----IIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
                 I+FSQ+ + ++++E  L  + I++  +   M  + + K++  F        ++M 
Sbjct: 964  AGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVMIMS 1023

Query: 1050 -GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +ASLGL++     V +++  W+ + E+Q I RAHR+G TRP+ V    ++ TVE+++L
Sbjct: 1024 LKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRIL 1083

Query: 1109 EFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFA 1143
               Q   + R ++     + E+   +SH T+ D +
Sbjct: 1084 ALQQ---KKRMMVASAFGEDEKGSRQSHLTVEDLS 1115


>gi|402087160|gb|EJT82058.1| DNA repair and recombination protein RAD5C [Gaeumannomyces graminis
            var. tritici R3-111a-1]
          Length = 956

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 129/576 (22%), Positives = 238/576 (41%), Gaps = 86/576 (14%)

Query: 614  RATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            +ATL+VVPS  L++ W  +I++H RP  +    +    +    ++    D+V+TT+  + 
Sbjct: 399  KATLVVVPSELLLNTWIKEIERHFRPYSIRYSKYHGSDRRDLDTILLQQDLVLTTYGTVM 458

Query: 673  AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            A+  RR  S +  + W R++LDE H + +    T +     S+++  RW LTGTP  N+ 
Sbjct: 459  ADR-RRASSAIHTIKWHRLILDEAHLIRNWG--TKQFDAVHSISSQIRWCLTGTPIQNS- 514

Query: 733  NSQLSHLQPMLKFLHEEAYGQNQ--KAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK 790
               L  L  ++KFL    + +    + +   I R       EG    L+L+   +   R 
Sbjct: 515  ---LDDLGSLVKFLRMPIFSEPATFRKYLTKITR--TRAHPEGEFTSLRLILSSICLRRS 569

Query: 791  TDLQTIPLC---IKEVTFLNFTEEHAGTYNELVVTVRRNI---------LMADWNDPSHV 838
             D+  +P     ++E     FT    G YN L    +  I         + A  N+ + +
Sbjct: 570  KDI--MPQSQGHVEEYRKPKFTATELGQYNTLTTACKNAIAISAKKTAGVAAASNEHTIM 627

Query: 839  ESLL------NPKQWKFR----STTIRNLR-------------------LSCCVAGHIKV 869
            E+LL      N  +  +R    S   R  R                    SCC    + +
Sbjct: 628  EALLRLRMFCNNGEAAYRLNLSSILTRGSRGSSRSLPDEVLSYLQQKGEASCCYCS-VDI 686

Query: 870  TDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVA------MDSE 923
               G  I +       N     + E      NL    +CLR ++C  C         + +
Sbjct: 687  VSLGPSISDGETSGSNNESSSSTPESDL---NLACLTHCLR-LVCHGCTQEYRGSQAEGQ 742

Query: 924  KCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPN 983
              + P C  ++   S  +    +  + K           P  +Q+ +    L +D+    
Sbjct: 743  PFTCPLCHHIH--GSGSVFDESKQQDSKGAG-------HPGLQQYPSKINALVEDI---- 789

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF--RHDA 1041
                 +L +K ++FS +   + ++ + L   GIK+  +   + +  +   L  F  RH  
Sbjct: 790  --RAHSLTEKCVVFSFWKTTLDIVGKALDARGIKYLRVDGDVSAKKRGNILLTFQTRHAF 847

Query: 1042 SCLALLMDGSASLGLD-LSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR 1100
            S L L+   + ++GL+ L+   RV ++EP W+ + E+Q + R  R+  ++ + +   AM 
Sbjct: 848  SVL-LITFSTGAVGLNGLTVANRVHILEPQWNPAAEKQAVGRLLRLDQSKKVTIVRYAME 906

Query: 1101 GTVEEQMLEF-LQDTDRCRRLLKEELVKPEREGARS 1135
            GT+EE + +  L+      R   ++L + ER   ++
Sbjct: 907  GTIEESVQKMQLRKLQLAGRGFAKQLSQDERRALKN 942



 Score = 45.1 bits (105), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 5/80 (6%)

Query: 167 LFPHQQAAVEWMLHREWNAEV-LRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFH 225
           L+ HQQ A+EW+L RE +        L+       G   Y + V+G  A    P+  DF 
Sbjct: 314 LYSHQQEAMEWILQRELDVSPDGGDDLWERSTLPSGEICYQHRVTG--AKSRVPS--DFK 369

Query: 226 GGMFCDEPGLGKTITALSLI 245
           GG+  D+ GLGKT+T L+ +
Sbjct: 370 GGILADDMGLGKTLTTLAAV 389


>gi|67901102|ref|XP_680807.1| hypothetical protein AN7538.2 [Aspergillus nidulans FGSC A4]
 gi|40742928|gb|EAA62118.1| hypothetical protein AN7538.2 [Aspergillus nidulans FGSC A4]
 gi|259483857|tpe|CBF79592.1| TPA: ATP-dependent DNA helicase (Eurofung) [Aspergillus nidulans
           FGSC A4]
          Length = 1132

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 98/191 (51%), Gaps = 20/191 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           LS++TL+V P  L+  W+++I+  V P  +L + V+  + +  A     DYDVVITT+  
Sbjct: 416 LSKSTLVVAPLALIKQWESEIKTKVEPSHRLRVLVYHGNARAKATDSLDDYDVVITTYGT 475

Query: 671 LSAEWG----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           L++E        KK+ +  V+W R++LDE HT+ +        Q A +L A  RW L+GT
Sbjct: 476 LTSEHNAVTKNDKKAGIFSVYWYRIILDEAHTIKN--RNAKATQAAYALDAEYRWCLSGT 533

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLH 782
           P  N     L  LQ +++FL  + Y  +   W   I RP    +  GR  L    LQ++ 
Sbjct: 534 PMQNN----LDELQSLIRFLRIKPY-NDLANWKDQITRP----LANGRGGLAIERLQVVL 584

Query: 783 RCMISARKTDL 793
           +  +  R  D+
Sbjct: 585 KAFMKRRTKDV 595



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 988  KALPD-KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
            +  PD K I+FS F   +  IE  L+ AGI +A     M +  +  SL+  R+      L
Sbjct: 911  REAPDFKFIVFSVFTSMLDKIEPFLSRAGIGYARYDGSMRNDLREASLEKLRNHRGTRVL 970

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            L    + +LGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  + ++ TVEE
Sbjct: 971  LCSLRAGALGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKMIIKDTVEE 1030

Query: 1106 QMLEFLQDTDR 1116
            ++L+ LQ+  R
Sbjct: 1031 RILD-LQERKR 1040


>gi|302695141|ref|XP_003037249.1| hypothetical protein SCHCODRAFT_73063 [Schizophyllum commune H4-8]
 gi|300110946|gb|EFJ02347.1| hypothetical protein SCHCODRAFT_73063 [Schizophyllum commune H4-8]
          Length = 1205

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 73/118 (61%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  IE+ L VAGI++  +   M   ++ +++D  ++D  C  LL+   +
Sbjct: 1052 KTVVFSQWTTMLDKIEEALDVAGIRYDRLDGTMKRDDRTRAMDALKYDPGCEVLLVSLKA 1111

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+  +RV+LM+P W+ ++E Q + R HR+G TRP+    L +  T+E ++LE
Sbjct: 1112 GGVGLNLTAASRVYLMDPYWNPAVENQAVDRIHRLGQTRPVTTVKLIIENTIEARLLE 1169



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/322 (20%), Positives = 114/322 (35%), Gaps = 108/322 (33%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQH------------------------------------V 636
           SRATLI+ P   V +W+ Q ++H                                    V
Sbjct: 488 SRATLIICPLSTVSNWEDQFKEHWRGEVRVTGGASGTCVPIAFSSMSLQSAPGTPSDHSV 547

Query: 637 RP----GQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKS----------- 681
            P    G   ++V+  + +    +   D+D VITT+  L+ E+ ++ KS           
Sbjct: 548 SPYQPGGPFKVYVYHGNARRPDPAFLADFDAVITTYATLATEFSKQSKSIANQEAECDED 607

Query: 682 ----------------------------------------PMMQVHWLRVMLDEGHTLGS 701
                                                   P+  +HW RV+LDE H +  
Sbjct: 608 SDNDSGGVEYDERGNPTLRLPKQRAGMKRKKPCGTAEQPSPLQSIHWFRVVLDEAHCIKE 667

Query: 702 SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
           +  + ++      L A  R  LTGTP  N    +L  +  ++KFL  E    ++  W   
Sbjct: 668 TSTVASR--ACCDLMADRRLCLTGTPVQN----KLDDVYALIKFLRLEPL-DDKNVWTDM 720

Query: 762 ILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQT--------IPLCIKEVTFLNFTEEHA 813
           +  P +     G +R LQ + +C+   R  + +         +P    E+ +L F E+  
Sbjct: 721 VGSPVKFAQPIGIAR-LQTIMKCITLRRTKETKADDGRKILNLPPRRDELRYLKFDEQEQ 779

Query: 814 GTYNELVVTVRRNI-LMADWND 834
             Y+E   + +     M+D N+
Sbjct: 780 TIYDEFFQSSKAEFNEMSDNNE 801


>gi|167516624|ref|XP_001742653.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779277|gb|EDQ92891.1| predicted protein [Monosiga brevicollis MX1]
          Length = 649

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 130/586 (22%), Positives = 239/586 (40%), Gaps = 121/586 (20%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITT----- 667
            +R T+++ P+  +  W+ +++     G L  FV+    +         +D+++TT     
Sbjct: 94   NRPTMVICPTVALMQWRNEVRSKTVEGALSCFVYHGDNRIRDLEQLSSFDIILTTYATVE 153

Query: 668  --FNRLSAEWGRR-----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
              F R+ + + R+     + S +  +H  R++LDE H +      +N  +    L A  +
Sbjct: 154  SGFRRMKSGFQRKGQKMYEDSVLHALHLHRLVLDEAHYIKD--RFSNTARAVWDLKADYK 211

Query: 721  WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAY-------------------------GQNQ 755
            W L+GTP  N    ++  L  ++K L  + Y                         G   
Sbjct: 212  WSLSGTPLQN----RVGELYSLVKLLRADPYSHYFCRQCPCKSLKWSFERRQCTECGHRS 267

Query: 756  KA----WDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEE 811
             +    W+  ILRP +     G  +L     R ++SA                 L  T+ 
Sbjct: 268  MSHFCWWNREILRPIQKHGPHGEGKLAFDRLRKLLSA---------------MMLRRTKH 312

Query: 812  HAGTYNEL-----VVTVRRNILMADWNDPSHVESLLNPKQWKFRS-----TTIRN----- 856
              G  NEL     +V  RR++   +  D    E+L +  + +F++     T + N     
Sbjct: 313  ERG--NELGLPPRIVHTRRDLFSHEEED--FYEALYSQSKTRFQNFVQEGTVLNNYAHIF 368

Query: 857  ---LRLSCCVAGHIKVT---DAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLR 910
               +R+   V     VT   D+ +D ++T  +  E   DP++ E               +
Sbjct: 369  ELLMRMRQSVNHPWLVTHRSDSKKD-KDTCGICYEMAEDPIASE--------------CK 413

Query: 911  HILCLDCVAM---DSEKCSLPGCGFLYEMQSPEI----LTRPENPNPKWPVPQDLIELQP 963
            H+ C + ++M      +   P C   +   S ++    + R E+   K      +  L  
Sbjct: 414  HVFCREEMSMYLASVPEGQPPACPVCFRTLSIDLTQPAVERSEDVKKKRSKTNIVRRLDI 473

Query: 964  SYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGI---KFAG 1020
               Q S     + ++L R    ++ ++  K I+FSQF   + ++E +L  AGI   K  G
Sbjct: 474  EAWQSSTKIEAILEEL-RSGQSASSSI--KTIVFSQFTTFLDLLEWRLQRAGIRCVKLDG 530

Query: 1021 MYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVI 1080
              SP H ++ I++ +   H  + L  L  G   L L+L   +R  + +P W+ + E Q +
Sbjct: 531  RMSPQHRADVIEAFNTQPHLTAFLISLKAGG--LALNLVSASRCIICDPWWNPATESQAM 588

Query: 1081 SRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELV 1126
             R HR+G  RP+ V  L +  ++E + ++ LQ+    +RLL E  V
Sbjct: 589  DRIHRLGQNRPVEVIRLIVENSIESR-IDQLQEK---KRLLFESTV 630


>gi|393244259|gb|EJD51771.1| hypothetical protein AURDEDRAFT_111387 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1236

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 71/119 (59%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  IE  L VA I++  +   M   ++ KS+D  +H+ +C  LL+   +
Sbjct: 1075 KTVVFSQWTSMLDKIEDALDVANIQYERLDGTMKRDDRTKSIDALKHNPACEVLLVSLRA 1134

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+  TR +LM+P W+ ++E Q I R HR+G TRP+    L +  T+E ++LE 
Sbjct: 1135 GGVGLNLTAATRCYLMDPYWNPAVENQAIDRIHRLGQTRPVETVKLIIENTIEARLLEM 1193



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 71/242 (29%)

Query: 636 VRPGQ-LHLFVW-TDHKKPSAHSLAWDYDVVITTFNRLSAEW------------------ 675
           VR G  + L+V+  + ++P  + LA D+D+V+TT++ L++E+                  
Sbjct: 558 VRDGTPIRLYVYHGNARRPDPYFLA-DFDIVLTTYSTLASEYSKQMRSIAPQEEDDAAAS 616

Query: 676 ----------------------------GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTN 707
                                       G+   SP+  +HW RV+LDE H    S+  TN
Sbjct: 617 DGAGGSYDFDESGTPKKKAKKRKPRLAPGQEATSPLQMIHWFRVVLDEAH----SIKETN 672

Query: 708 KL--QMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRP 765
            +  + +  L A  R  LTGTP  N    ++  L  ++KF+    +  ++ +W   I  P
Sbjct: 673 TVACRASCDLMADRRICLTGTPVQN----KVDDLYALIKFMRIHPF-DDKASWTENIGSP 727

Query: 766 FEAEMEEGRSRLLQLLHRCMISARKTD---------LQTIPLCIKEVTFLNFTEEHAGTY 816
            +   + G +R LQ +  C I+ R+T          + T+P    E+ +L F E     Y
Sbjct: 728 VKFGQQVGINR-LQTIMSC-ITLRRTKESKNSQGQPILTLPPRRDEIRYLKFDETEQAIY 785

Query: 817 NE 818
           NE
Sbjct: 786 NE 787


>gi|297741672|emb|CBI32804.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 18/216 (8%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
           R  +S+ TLIV P  +   W TQ+ +H  P +L ++++  ++   A  L   YD+V+TT+
Sbjct: 241 RKAISKTTLIVCPPSVFSTWVTQLLEHTTPKRLKVYMYYGNRTQEAEELQ-KYDIVLTTY 299

Query: 669 NRLSAE--WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           + L+ E  W     SP+ ++ W RV+LDE H +  ++N   + Q   +L A  RW++TGT
Sbjct: 300 STLATEEAWS---GSPVKKIEWWRVILDEAHMI-KNVN-AQQSQAVTNLRAKRRWVVTGT 354

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
           P  N      S    ++ FL  E +   +  W   + RP     E+G SRL  L+    I
Sbjct: 355 PIQNGTFDLFS----LMAFLRFEPFSI-KSYWQSLVQRPLGQGKEKGLSRLQVLM--ATI 407

Query: 787 SARKTD---LQTIPLCIKEVTFLNFTEEHAGTYNEL 819
           S R+T    L  +P    E  F+  + E    Y+++
Sbjct: 408 SLRRTKDKGLIGLPPKSVETCFVELSAEERELYDQM 443



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 35/145 (24%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF + + ++EQ L  A +                           LA L    A
Sbjct: 691  KSVVFSQFRKMLLLLEQPLKAAVL---------------------------LASLKASGA 723

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
              G++L+  +RV+L+EP W+ ++EEQ + R HR+G    + +  L  R ++EE++LE   
Sbjct: 724  --GINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEERILEL-- 779

Query: 1113 DTDRCRRLLKEELVKPEREGARSHR 1137
              +R ++L KE      R G +  R
Sbjct: 780  -QERKKKLAKEAF---GRRGLKDRR 800


>gi|407916122|gb|EKG09538.1| SNF2-related protein [Macrophomina phaseolina MS6]
          Length = 454

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 139/287 (48%), Gaps = 19/287 (6%)

Query: 541 ETTGLASPILGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLA 600
           E  GL    +     GE       F+  G I   E G+      KTL  +A   +     
Sbjct: 5   EGNGLNRRFVNRVTGGEQSAAPPQFR--GGILADEMGLG-----KTLSMIALIASDRDSD 57

Query: 601 LCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD 660
           L +  D +    + ATLIV+PS L+  W +Q++QH+    L      D+ + +  S    
Sbjct: 58  LHDEQDRLPENFTDATLIVLPSSLLQVWDSQLKQHLHSASLSWRKHHDNHRITKLSELKQ 117

Query: 661 YDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
           +++++TT+  ++A+   +  SP++  HW R++LDE H + +  N+T K     S+ A+ R
Sbjct: 118 HNIILTTYQTIAAQRN-QANSPILTAHWKRIILDEAHNIRNRNNITAK--AIFSIKANCR 174

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF-EAEMEEGRSRLLQ 779
           W +TGTP  N+    L     +L+FL    + +   A+D  I +P+ E   +E   RL +
Sbjct: 175 WAITGTPIQNS----LHDFASLLEFLRVHPF-EGPGAFDRLIQKPWKEGNADEAIERLKR 229

Query: 780 LLHRCMISAR-KTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRR 825
           L+ RC+I  R KT +Q +P     + +++F+ E    Y ++   V +
Sbjct: 230 LI-RCIILRRLKTTIQ-LPTRQDLILYVDFSAEEHLRYKQVSCPVEQ 274


>gi|413922572|gb|AFW62504.1| hypothetical protein ZEAMMB73_089249 [Zea mays]
          Length = 618

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 9/140 (6%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
           + LI+ P  L+  WK +I+ H +PG  +++V     +P   S+    D+V+TT+  +S+E
Sbjct: 480 SNLIICPMTLISQWKAEIEAHTKPGTANIYVHYGQNRPKDASIIGQSDIVLTTYGVVSSE 539

Query: 675 W---GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
           +   G  +   +  VHW RV+LDE H + SS +L +    A +LTA  RW LTGTP  N 
Sbjct: 540 FSIDGSTENGALYSVHWFRVVLDEAHMIKSSKSLIS--LAAAALTADRRWCLTGTPIQN- 596

Query: 732 PNSQLSHLQPMLKFLHEEAY 751
               L  L  + +FL  E +
Sbjct: 597 ---NLEDLYSLFRFLKVEPW 613



 Score = 47.8 bits (112), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 12/114 (10%)

Query: 141 DLVRIAATCR-HLRCLAASIMPCMKLKLFPHQQAAVEWMLHRE-----WNAEVLRHPLYI 194
           D++ I+ +C    R    S+M      L  +Q+ A+ WML  E      +A    HP + 
Sbjct: 318 DIIGISDSCALEERAPPDSLM----CDLRSYQKQALHWMLQLEKGSSSQDAATTLHPCWE 373

Query: 195 DLATEDG--FYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
               ED      Y+N  SGD  T    T++   GG+  D  GLGKTI  ++L+L
Sbjct: 374 AYKLEDKRELVLYLNVFSGDATTEFPSTLQLSRGGILADAMGLGKTIMTIALLL 427


>gi|358393695|gb|EHK43096.1| hypothetical protein TRIATDRAFT_130946 [Trichoderma atroviride IMI
           206040]
          Length = 1151

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 13/210 (6%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           ++ATLI+ P   + +W  QI+QH+ PG+L   ++    +    +    YD+V+TT+  +S
Sbjct: 562 TKATLIICPLSTITNWDEQIKQHIAPGELSYHIYHGPSRIKDIARLASYDIVLTTYGSVS 621

Query: 673 AEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            E G R+K+     P+ ++ W R++LDE H +      T + +  + L A  RW +TGTP
Sbjct: 622 NELGARRKAKSGNYPLEEIGWFRIVLDEAHMIRE--QSTMQFKAIVRLQAQRRWAVTGTP 679

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
             N    +L     +L F+  E +    K +   I+ PF+A   E   + L++L   +  
Sbjct: 680 VQN----RLDDFAALLSFIRLEPFHHRAK-FVRHIVEPFKACNPEIVPK-LRILVDSITL 733

Query: 788 ARKTDLQTIPLCIKEVTFLNFTEEHAGTYN 817
            R  D   +P     +  L+F+ E  G Y+
Sbjct: 734 RRLKDKIDLPSREDLIVKLDFSPEERGVYD 763



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FS +  H+ +IE  L  A I F  +   M    +  ++D FR D S   +L+  
Sbjct: 994  PFKSVVFSGWTSHLDLIELALNEANISFTRLDGSMTRQARTAAMDSFREDNSIHVILVSI 1053

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  LGL+L+    V++MEP ++ + E Q + R HR+G  RP+      MR + EE+MLE
Sbjct: 1054 MAGGLGLNLTAANNVYVMEPQYNPAAEAQAVDRVHRLGQKRPVRTIRYIMRNSFEEKMLE 1113

Query: 1110 F 1110
             
Sbjct: 1114 L 1114


>gi|367038785|ref|XP_003649773.1| hypothetical protein THITE_2108697 [Thielavia terrestris NRRL 8126]
 gi|346997034|gb|AEO63437.1| hypothetical protein THITE_2108697 [Thielavia terrestris NRRL 8126]
          Length = 1008

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 144/618 (23%), Positives = 255/618 (41%), Gaps = 120/618 (19%)

Query: 576  KGITRWYYPKTLDNLAFDLAALR-----------LALCEPLDSVRLYLS-----RATLIV 619
            K I+R   P  L+ LA+ +A  +           + L + + +V L +S     + +L++
Sbjct: 399  KSISRQLKPFQLEGLAWMMAMEKTEWKGGLLGDEMGLGKTIQAVSLIMSDFPAKKPSLVL 458

Query: 620  VPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTFNRLSAEWG 676
             P   +  W T+I+ +   G L   V       S +    D   YDV+I ++N L + + 
Sbjct: 459  APPVALMQWMTEIESYT-DGTLKTLVLHGTNSKSKNLTVKDLKAYDVIIMSYNSLESMYR 517

Query: 677  R------------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLT 724
            +            ++KS +    + RV+LDE H + +   +T +   A  L A+ RW L+
Sbjct: 518  KQEKGFKRRDGLFKEKSIIHLTPFHRVILDEAHCIKTRSTMTARACFA--LKATYRWCLS 575

Query: 725  GTPTPNTPNSQLSHLQPMLKFLHEEAYG------------------------------QN 754
            GTP  N    ++     +++FL+   +                               ++
Sbjct: 576  GTPLQN----RIGEFFSLIRFLNVRPFSCYLCKQCPCSTLEWQMDDDNNCTGCGHGGMRH 631

Query: 755  QKAWDGGILRPFEAEMEEGRS-----RLLQLLHRCMISARKTD-LQTIPLCIKEVTFLN- 807
               ++  +L P +     GR      +L  L  R M+   K D   ++ L +KE+     
Sbjct: 632  VSVFNQELLNPIQKFGNRGRGAEAFKKLRILTDRIMLRRLKKDHTDSMELPVKEINVERQ 691

Query: 808  -FTEEHAGTYNELVVTVRRNILMADWNDPSHVES--LLNPKQWKFRSTTIRNLRLSCCVA 864
             F EE     N ++   +R          ++V S  LLN     F    I  +R    VA
Sbjct: 692  FFGEEENDFANSIMTNSQRKF-------DTYVASGVLLNNYANIF--GLIMQMRQ---VA 739

Query: 865  GH-----IKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVA 919
             H      K ++ G++I      LV N  D  +++    +          +H  C  CV 
Sbjct: 740  DHPDLILKKNSEGGQNI------LVCNICDEPAEDAIRSR---------CKHDFCRTCVR 784

Query: 920  MDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNT--FLKQ 977
                  + P C   +   S + L +PE    +  V +  I  +     W++++    L  
Sbjct: 785  SYLNSTTDPNCPQCHIPLSID-LEQPEIEQDEAMVKKSSIINRIKMENWTSSSKIELLVH 843

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF 1037
            +L++  L S+ A   K IIFSQF   + +IE +L  AGI    +   M  + +  S++ F
Sbjct: 844  ELHK--LRSDNA-SHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASINHF 900

Query: 1038 RH--DASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
                D  C  L+   +  + L+L+  +RVF+++P W+ + E Q   R HR+G TRP  + 
Sbjct: 901  MTNVDVECF-LVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQTRPCTIT 959

Query: 1096 TLAMRGTVEEQMLEFLQD 1113
             L +  +VE +M+  LQ+
Sbjct: 960  RLCIEDSVESRMV-LLQE 976


>gi|2281697|gb|AAB64175.1| transcription factor [Mus musculus]
          Length = 1002

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAW--DYDVVITTFNR 670
           +RATLI+ P  ++ +W  Q  QHV+  ++HL  +  +        AW    D+++TT+N 
Sbjct: 469 TRATLIICPLSVLSNWIDQFGQHVK-SEVHLNFYVYYGPDRIRDSAWLSKQDIILTTYNI 527

Query: 671 LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
           L+ ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N
Sbjct: 528 LTHDYGTKDDSPLHSIKWLRVILDEGHAIRNP--NAQQTKAVLELEAERRWVLTGTPIQN 585

Query: 731 TPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK 790
           +    L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   K
Sbjct: 586 S----LKDLWSLLSFLKLKPF-IDREWWYRIIQRPVTTGDEGGLRRLQSLIKNITLRRTK 640

Query: 791 T 791
           T
Sbjct: 641 T 641



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 3/126 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD--G 1050
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    +     
Sbjct: 847  KSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRFQNTEAGSPTISTVLK 906

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +  +GL+L   +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+ 
Sbjct: 907  AGGVGLNLCARSRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK- 965

Query: 1111 LQDTDR 1116
            +Q+T R
Sbjct: 966  IQNTKR 971



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMIARENSKEL--PPFW-----EQRNDLYYNTIT-NFSVKERP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|322706831|gb|EFY98411.1| SNF2 family helicase/ATPase, putative [Metarhizium anisopliae ARSEF
           23]
          Length = 1158

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 13/208 (6%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           ++TLIV P   V +W+ Q++QHV PG L   ++    +        ++DVVITT+  +S 
Sbjct: 575 KSTLIVCPLSTVTNWEEQMKQHVAPGGLSYHIYHGSNRIKDVDKLAEFDVVITTYGSVSN 634

Query: 674 EWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           E G R+K      P+ ++ W R++LDE H +  S  L  + +    L A  RW +TGTP 
Sbjct: 635 ELGSRRKGKDGIYPLEEIGWFRIVLDEAHMIRESSTL--QFKAMCRLQAERRWAVTGTPV 692

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
            N    +L  L  +L FL    +    K ++  I+ PF+A   E   +L  L+    +  
Sbjct: 693 QN----RLDDLAALLSFLRLHPFDDRSK-FNRYIVEPFKACDPEIVPKLRVLVDTITLR- 746

Query: 789 RKTDLQTIPLCIKEVTFLNFTEEHAGTY 816
           R  D   +P     V  LNF+ E    Y
Sbjct: 747 RLKDKIDLPKREDLVIRLNFSPEERSIY 774



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 6/141 (4%)

Query: 975  LKQDLYRPNLESNKALPD----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNK 1030
            L +DL +    S +A PD    K ++FS +  H+ +IE  L  AGI F  +   M    +
Sbjct: 982  LVEDLLKSKAAS-QASPDEPPFKSVVFSGWTSHLDLIELALKAAGITFVRLDGSMTRMAR 1040

Query: 1031 IKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGAT 1089
              +++ FR D +   +L+   +  LGL+L+    V++MEP ++ + E Q I R HR+G  
Sbjct: 1041 TAAMEKFREDNTVEVILVSIMAGGLGLNLTAGNTVYVMEPQYNPAAEAQAIDRVHRLGQK 1100

Query: 1090 RPIHVETLAMRGTVEEQMLEF 1110
            RP+      M+ + EE+MLE 
Sbjct: 1101 RPVRTVRYIMQDSFEEKMLEL 1121


>gi|67763824|ref|NP_033236.2| helicase-like transcription factor isoform 1 [Mus musculus]
 gi|60390920|sp|Q6PCN7.1|HLTF_MOUSE RecName: Full=Helicase-like transcription factor; AltName:
           Full=P113; AltName: Full=SWI/SNF-related
           matrix-associated actin-dependent regulator of chromatin
           subfamily A member 3; AltName: Full=Sucrose
           nonfermenting protein 2-like 3; AltName:
           Full=TNF-response element-binding protein
 gi|34785644|gb|AAH57116.1| Helicase-like transcription factor [Mus musculus]
 gi|37590668|gb|AAH59240.1| Helicase-like transcription factor [Mus musculus]
 gi|148702945|gb|EDL34892.1| mCG123397, isoform CRA_c [Mus musculus]
          Length = 1003

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAW--DYDVVITTFNR 670
           +RATLI+ P  ++ +W  Q  QHV+  ++HL  +  +        AW    D+++TT+N 
Sbjct: 469 TRATLIICPLSVLSNWIDQFGQHVK-SEVHLNFYVYYGPDRIRDSAWLSKQDIILTTYNI 527

Query: 671 LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
           L+ ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N
Sbjct: 528 LTHDYGTKDDSPLHSIKWLRVILDEGHAIRNP--NAQQTKAVLELEAERRWVLTGTPIQN 585

Query: 731 TPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK 790
           +    L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   K
Sbjct: 586 S----LKDLWSLLSFLKLKPF-IDREWWYRIIQRPVTTGDEGGLRRLQSLIKNITLRRTK 640

Query: 791 T 791
           T
Sbjct: 641 T 641



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 847  KSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRFQNTEAGSPTIMLLSL 906

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+L   +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 907  KAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 966

Query: 1110 FLQDTDR 1116
             +Q+T R
Sbjct: 967  -IQNTKR 972



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMIARENSKEL--PPFW-----EQRNDLYYNTIT-NFSVKERP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|2275597|gb|AAB63915.1| TNF-response element binding protein [Mus musculus]
          Length = 841

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAW--DYDVVITTFNR 670
           +RATLI+ P  ++ +W  Q  QHV+  ++HL  +  +        AW    D+++TT+N 
Sbjct: 469 TRATLIICPLSVLSNWIDQFGQHVK-SEVHLNFYVYYGPDRIRDSAWLSKQDIILTTYNI 527

Query: 671 LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
           L+ ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N
Sbjct: 528 LTHDYGTKDDSPLHSIKWLRVILDEGHAIRNP--NAQQTKAVLELEAERRWVLTGTPIQN 585

Query: 731 TPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK 790
           +    L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   K
Sbjct: 586 S----LKDLWSLLSFLKLKPF-IDREWWYRIIQRPVTTGDEGGLRRLQSLIKNITLRRTK 640

Query: 791 T 791
           T
Sbjct: 641 T 641



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P + +   +     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMIARENSKEL---PPFWEQRND----LYYNTIT-NFSVKERP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|67763822|ref|NP_659208.2| helicase-like transcription factor isoform 2 [Mus musculus]
 gi|148702944|gb|EDL34891.1| mCG123397, isoform CRA_b [Mus musculus]
          Length = 841

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAW--DYDVVITTFNR 670
           +RATLI+ P  ++ +W  Q  QHV+  ++HL  +  +        AW    D+++TT+N 
Sbjct: 469 TRATLIICPLSVLSNWIDQFGQHVK-SEVHLNFYVYYGPDRIRDSAWLSKQDIILTTYNI 527

Query: 671 LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
           L+ ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N
Sbjct: 528 LTHDYGTKDDSPLHSIKWLRVILDEGHAIRNP--NAQQTKAVLELEAERRWVLTGTPIQN 585

Query: 731 TPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK 790
           +    L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   K
Sbjct: 586 S----LKDLWSLLSFLKLKPF-IDREWWYRIIQRPVTTGDEGGLRRLQSLIKNITLRRTK 640

Query: 791 T 791
           T
Sbjct: 641 T 641



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P + +   +     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMIARENSKEL---PPFWEQRND----LYYNTIT-NFSVKERP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|431899793|gb|ELK07740.1| Helicase-like transcription factor [Pteropus alecto]
          Length = 1001

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 8/180 (4%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           SR TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L
Sbjct: 467 SRTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNIL 526

Query: 672 SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
           + ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+
Sbjct: 527 THDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS 584

Query: 732 PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
               L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 585 ----LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 639



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 845  KSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 904

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 905  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 964

Query: 1110 FLQDTDR 1116
             +Q+T R
Sbjct: 965  -IQNTKR 970



 Score = 49.3 bits (116), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P + +  ++     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL---PPFWEQRSD----LYYNTIT-NFSEKDRPD--NVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|403164882|ref|XP_003324951.2| hypothetical protein PGTG_06488 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|375165439|gb|EFP80532.2| hypothetical protein PGTG_06488 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 688

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 133/576 (23%), Positives = 215/576 (37%), Gaps = 138/576 (23%)

Query: 588  DNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWT 647
            D++ F      +AL            + TL+V P  L D W  +++Q      L + ++ 
Sbjct: 170  DDMGFGKTVQSIALISAHKQTEKGAPKTTLVVCPLALKDQWVDEVEQK---SDLSVILYH 226

Query: 648  DHKKPS-AHSLAWDYDVVITTFNRLSAEWGRRKK-------------------------- 680
              K+   AH L   Y VV+TT++ +S+EW   KK                          
Sbjct: 227  GSKRHQIAHKL-HKYRVVVTTYDVVSSEWQNPKKTAQAGDESSEDEDQLGDGPGAKKSKA 285

Query: 681  -----------------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
                             SPM    + R++LDE H + +      K +    L  + +W L
Sbjct: 286  TRAKKTKPCPLFTKEDGSPM---RFWRIILDEAHVIKN--RNAQKTKACSELRGNYKWCL 340

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQ-KAWDGGILRPFEAEMEEGRSRLLQ--- 779
            TGTP  N     +  + P+L+F+       N+   +   IL+P ++   +G    +Q   
Sbjct: 341  TGTPIQNG----VEDIFPLLRFIGPSVKPFNEYPEFQEKILKPMKSSNGKGAIVKIQALL 396

Query: 780  ---LLHRCMISARKTDLQTIPLCIKEVTFLNF---TEEHAGTYNELV--VTVRRNILMAD 831
               LL R   S  K     + L  KE+  L     T E    Y  +   +T R   + A 
Sbjct: 397  KIILLRRSKDSKDKAGNPILKLPGKELILLRTPFRTSEETQFYQTVTERMTERMAKISAS 456

Query: 832  WNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAG-----EDIQETMDVLVEN 886
             N      ++L       ++T    L      A +++ TDA      ED+++ +D L + 
Sbjct: 457  GNMQRSYITILTLVLRMRQATLHPALGSDKADAENLEATDAKNSAPQEDLEDKVDSLAD- 515

Query: 887  GLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPE 946
                                        +D + +  ++   P C    E+  PE+     
Sbjct: 516  ---------------------------MMDSMGVKQDQ---PKCLICLEILPPEVA---- 541

Query: 947  NPNPKWPVPQDLIELQPSYRQWSNTNTF-----------LKQDLYRPNLESNKALPDKVI 995
                      D +      RQ     TF           L + L     E  K  P K I
Sbjct: 542  ----------DAVHCTACARQLRLAKTFEGMQSSTKVSRLLELLDEIKAEDTKT-PKKTI 590

Query: 996  IFSQFLEHIHVIEQQLTVAG---IKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            +FSQF   +++IE  +  AG    ++ G  SP     K ++L+  + D  C  LL+    
Sbjct: 591  VFSQFTSFLNLIEPFIKKAGYGYTRYDGAKSP---DEKTRALEKIKSDPKCTVLLISLKC 647

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMG 1087
             S+GL+L+  +RV LM+P W+ S+E Q   RAHR G
Sbjct: 648  GSVGLNLTCCSRVILMDPWWNPSIETQAFDRAHRFG 683


>gi|222637545|gb|EEE67677.1| hypothetical protein OsJ_25316 [Oryza sativa Japonica Group]
          Length = 641

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 20/216 (9%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           SR TL+V P  +   W TQ+++H + G L ++++   +      L   YD+VITT++ L 
Sbjct: 110 SRTTLVVCPPSVFSSWVTQLEEHTKTGSLKVYLYHGERTKEKKEL-LKYDIVITTYSTLG 168

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            E   ++ SP+ ++ W RV+LDE H + +S     + +  I+L A  RW++TGTP  N+ 
Sbjct: 169 QEL-EQEGSPVKEIEWFRVILDEAHVIKNS--AARQTKAVIALNAERRWVVTGTPIQNSS 225

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEE-GRSRLLQLLHRCMISARKT 791
                 L P++ FL  + +   +  W   I  P E +    G +RL  LL    IS R+T
Sbjct: 226 ----FDLYPLMAFLRFQPFS-IKSYWQSLIQLPLERKNNGIGLARLQSLLG--AISLRRT 278

Query: 792 --------DLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
                    L +IP       ++  + E    Y+++
Sbjct: 279 KETESGSKSLVSIPPKTVLACYIELSAEEREYYDQM 314



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 8/151 (5%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAG---IKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            K +IFSQF + + ++E  L  AG   ++  G  +    S  I+       D+  + L   
Sbjct: 485  KSVIFSQFRKMLILLEGPLKAAGFNILRLDGSMTAKKRSEVIRQFGCVGPDSPTVLLASL 544

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +A  G++L+  + V+L +P W+  +EEQ + R HR+G T+ + V  L ++ ++EE+MLE
Sbjct: 545  KAAGAGVNLTAASTVYLFDPWWNPGVEEQAMDRVHRIGQTKEVKVVRLIVKDSIEERMLE 604

Query: 1110 FLQDTDRCRRLLKEELVKPEREGARSHRTLH 1140
                 +R ++L+     +  ++G + H+ + 
Sbjct: 605  L---QERKKKLISGAFGR--KKGGKEHKEIR 630



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 9/85 (10%)

Query: 166 KLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFH 225
           +LF HQ+AA+ W++HRE + ++   P + +   + GF    N ++        P ++   
Sbjct: 11  ELFEHQKAALGWLVHREESCDL---PPFWEEDNDGGFK---NVLTNQKTNERPPPLK--- 61

Query: 226 GGMFCDEPGLGKTITALSLILKTQG 250
           GG+F D+ GLGKT+T LSLI +++ 
Sbjct: 62  GGIFADDMGLGKTLTLLSLIGRSKA 86


>gi|317144593|ref|XP_001820221.2| SNF2 family helicase [Aspergillus oryzae RIB40]
          Length = 1183

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 7/141 (4%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF         I + L + G+ F    S +    +   L++FR       LLMD  
Sbjct: 924  EKIIIFYDNNNSAFWIAEGLELLGVDFRIYASTLKPKVRAAYLELFREQEDVRVLLMDLH 983

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             AS GL ++  +RVF++ PIW  ++E Q I RAHR+G TRP+ VETL ++GT+E++MLE 
Sbjct: 984  QASHGLHIANASRVFIVNPIWQPNVESQAIKRAHRIGQTRPVFVETLVLKGTLEDKMLE- 1042

Query: 1111 LQDTDRCRRLLKEELVKPERE 1131
                 R + + ++E+ + ER+
Sbjct: 1043 -----RRKAMSEKEMQQAERD 1058



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 13/131 (9%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP-SAHSLAWDYDVVITT 667
           ++ L  ATLIVVP  LV+HWK +I +H     +++ V  D   P        +YD+V+ +
Sbjct: 432 QIRLCSATLIVVPPNLVNHWKDEIAKHAE--GVNVLVIQDSSAPVPPPDQLLEYDIVLFS 489

Query: 668 FNRLSAEWG-----RRKK-----SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTA 717
             R   E G     RR       SP+ ++HWLR+++DEGH +    + TN + +   L  
Sbjct: 490 KVRFEKEAGAASNNRRSSTAPGPSPLTKLHWLRIIVDEGHNVAGHGHRTNMVHILDQLHV 549

Query: 718 SNRWLLTGTPT 728
             RW+++GTP+
Sbjct: 550 ERRWIVSGTPS 560



 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 1/99 (1%)

Query: 158 SIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGT 217
           S +P ++  L+P+Q+ +   M+ RE     +  P      T  G  +Y +   G+I    
Sbjct: 251 SCVPYLRTALYPYQRRSAAVMIQREAQPTPMLDPRLKPYVTPTGQEYYYDKEEGNIIREK 310

Query: 218 APTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPP 256
                +  GG+  +  G GKT+  +++IL TQG     P
Sbjct: 311 R-MYSEPRGGILAETMGCGKTLICIAVILATQGHFPQVP 348


>gi|125559347|gb|EAZ04883.1| hypothetical protein OsI_27065 [Oryza sativa Indica Group]
          Length = 821

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 20/216 (9%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           SR TL+V P  +   W TQ+++H + G L ++++   +      L   YD+VITT++ L 
Sbjct: 290 SRTTLVVCPPSVFSSWVTQLEEHTKTGSLKVYLYHGERTKEKKEL-LKYDIVITTYSTLG 348

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            E   ++ SP+ ++ W RV+LDE H + +S     + +  I+L A  RW++TGTP  N+ 
Sbjct: 349 QEL-EQEGSPVKEIEWFRVILDEAHVIKNS--AARQTKAVIALNAERRWVVTGTPIQNSS 405

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME-EGRSRLLQLLHRCMISARKT 791
                 L P++ FL  + +   +  W   I  P E +    G +RL  LL    IS R+T
Sbjct: 406 FD----LYPLMAFLRFQPF-SIKSYWQSLIQLPLERKNNGTGLARLQSLLG--AISLRRT 458

Query: 792 --------DLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
                    L +IP       ++  + E    Y+++
Sbjct: 459 KETESGSKSLVSIPPKTVLACYIELSAEEREYYDQM 494



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 8/151 (5%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAG---IKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            K +IFSQF + + ++E  L  AG   ++  G  +    S  I+       D+  + L   
Sbjct: 665  KSVIFSQFRKMLILLEGPLKAAGFNILRLDGSMTAKKRSEVIRQFGCVGPDSPTVLLASL 724

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +A  G++L+  + V+L +P W+  +EEQ + R HR+G T+ + V  L ++ ++EE+MLE
Sbjct: 725  KAAGAGVNLTAASTVYLFDPWWNPGVEEQAMDRVHRIGQTKEVKVVRLIVKDSIEERMLE 784

Query: 1110 FLQDTDRCRRLLKEELVKPEREGARSHRTLH 1140
                 +R ++L+     +  ++G + H+ + 
Sbjct: 785  L---QERKKKLISGAFGR--KKGGKEHKEIR 810



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 9/85 (10%)

Query: 166 KLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFH 225
           +LF HQ+AA+ W++HRE + ++   P + +   + GF    N ++        P ++   
Sbjct: 191 ELFEHQKAALGWLVHREESCDL---PPFWEEDNDGGFK---NVLTNQKTNERPPPLK--- 241

Query: 226 GGMFCDEPGLGKTITALSLILKTQG 250
           GG+F D+ GLGKT+T LSLI +++ 
Sbjct: 242 GGIFADDMGLGKTLTLLSLIGRSKA 266


>gi|426218163|ref|XP_004003319.1| PREDICTED: helicase-like transcription factor [Ovis aries]
          Length = 1008

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 475 RTTLIICPLSVLSNWMDQFGQHIKSDVHLNFYVYYGPDRVRDPTLLSKQDIVLTTYNILT 534

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 535 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 591

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 592 ---LKDLWSLLSFLKLKPF-VDREWWHRTIQRPVTMGDEAGLRRLQSLIKNITLRRTKT 646



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 852  KSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 911

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 912  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 971

Query: 1110 FLQDTDR 1116
             +Q+T R
Sbjct: 972  -IQNTKR 977



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE N+E L  P + +  ++     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRE-NSEEL--PPFWEQRSD----LYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|164660106|ref|XP_001731176.1| hypothetical protein MGL_1359 [Malassezia globosa CBS 7966]
 gi|159105076|gb|EDP43962.1| hypothetical protein MGL_1359 [Malassezia globosa CBS 7966]
          Length = 1126

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 77/131 (58%), Gaps = 14/131 (10%)

Query: 608 VRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD-HKK-PSAHSLAWDYDVVI 665
           VR+YL+ ATL+VVP  LV  W  +I +H  PG L +    D H K PSA  LA DYD+++
Sbjct: 422 VRVYLTHATLVVVPPTLVMQWLDEINKHCIPGALRVLCMADMHAKLPSAEQLAQDYDLIL 481

Query: 666 TTFNRLSAEWGRRKK-------SPMMQVHWLRVMLDEGHTL-GSSLNLTNKLQMAISLTA 717
            +  R   E G  ++       SP+MQV+W R+++DEG+ L G SL     +++   L  
Sbjct: 482 MSHVRFGKEAGDEQRMRLHLDTSPLMQVYWKRLIIDEGNMLAGDSL----LVRLCACLRV 537

Query: 718 SNRWLLTGTPT 728
             RW++TGTPT
Sbjct: 538 ERRWVVTGTPT 548



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +KV++FS     ++ +   L +  I F    S M    +    +MF H ++   LLM  S
Sbjct: 925  EKVLVFSTLDNVLYELANALELLRIPFLFYVSGMPQHLRNAYANMFMHKSNIRCLLMTTS 984

Query: 1052 -ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
                GLDL   +RV   EP+W   +E Q + RA RMG TR + V T  MR T EE++ E 
Sbjct: 985  VGGRGLDLHCASRVIFAEPVWHWDLESQAVKRAWRMGQTRRVLVSTYVMRHTFEERITER 1044

Query: 1111 LQ 1112
             Q
Sbjct: 1045 KQ 1046



 Score = 46.6 bits (109), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 6/113 (5%)

Query: 161 PCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGD------IA 214
           P ++  LF +Q+ ++  +L RE   +    P +I   +      +V T + D        
Sbjct: 184 PQLRCTLFSYQKKSLAKILQRELWPQTYCDPYFIQCMSPCMIDGHVQTYAMDPERLEFFP 243

Query: 215 TGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHN 267
              A    D  GG+ CDE G+GKTI  L+L+L T   ++ P     +   T N
Sbjct: 244 IHAASLYPDVRGGILCDEMGVGKTIICLALVLSTIDQMSQPEQESMVSSVTSN 296


>gi|440900392|gb|ELR51541.1| Helicase-like transcription factor, partial [Bos grunniens mutus]
          Length = 1021

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 488 RTTLIICPLSVLSNWMDQFGQHIKSDVHLNFYVYYGPDRVRDPTLLSKQDIVLTTYNILT 547

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 548 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 604

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 605 ---LKDLWSLLSFLKLKPF-VDREWWHRTIQRPVTMGDEAGLRRLQSLIKNITLRRTKT 659



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 865  KSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 924

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 925  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 984

Query: 1110 FLQDTDR 1116
             +Q+T R
Sbjct: 985  -IQNTKR 990



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE N+E L  P + +  ++     Y NT++ + +    P   + HG
Sbjct: 238 LLPHQKQALAWMVSRE-NSEEL--PPFWEQRSD----LYYNTIT-NFSEKDRP--ENVHG 287

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 288 GILADDMGLGKTLTAIAVIL 307


>gi|115473675|ref|NP_001060436.1| Os07g0642400 [Oryza sativa Japonica Group]
 gi|23237908|dbj|BAC16482.1| putative RUSH-1alpha [Oryza sativa Japonica Group]
 gi|50509930|dbj|BAD30251.1| putative RUSH-1alpha [Oryza sativa Japonica Group]
 gi|113611972|dbj|BAF22350.1| Os07g0642400 [Oryza sativa Japonica Group]
          Length = 821

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 20/216 (9%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           SR TL+V P  +   W TQ+++H + G L ++++   +      L   YD+VITT++ L 
Sbjct: 290 SRTTLVVCPPSVFSSWVTQLEEHTKTGSLKVYLYHGERTKEKKEL-LKYDIVITTYSTLG 348

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            E   ++ SP+ ++ W RV+LDE H + +S     + +  I+L A  RW++TGTP  N+ 
Sbjct: 349 QEL-EQEGSPVKEIEWFRVILDEAHVIKNS--AARQTKAVIALNAERRWVVTGTPIQNSS 405

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEE-GRSRLLQLLHRCMISARKT 791
                 L P++ FL  + +   +  W   I  P E +    G +RL  LL    IS R+T
Sbjct: 406 FD----LYPLMAFLRFQPF-SIKSYWQSLIQLPLERKNNGIGLARLQSLLG--AISLRRT 458

Query: 792 --------DLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
                    L +IP       ++  + E    Y+++
Sbjct: 459 KETESGSKSLVSIPPKTVLACYIELSAEEREYYDQM 494



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 8/151 (5%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAG---IKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            K +IFSQF + + ++E  L  AG   ++  G  +    S  I+       D+  + L   
Sbjct: 665  KSVIFSQFRKMLILLEGPLKAAGFNILRLDGSMTAKKRSEVIRQFGCVGPDSPTVLLASL 724

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +A  G++L+  + V+L +P W+  +EEQ + R HR+G T+ + V  L ++ ++EE+MLE
Sbjct: 725  KAAGAGVNLTAASTVYLFDPWWNPGVEEQAMDRVHRIGQTKEVKVVRLIVKDSIEERMLE 784

Query: 1110 FLQDTDRCRRLLKEELVKPEREGARSHRTLH 1140
                 +R ++L+     +  ++G + H+ + 
Sbjct: 785  L---QERKKKLISGAFGR--KKGGKEHKEIR 810



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 9/85 (10%)

Query: 166 KLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFH 225
           +LF HQ+AA+ W++HRE + ++   P + +   + GF    N ++        P ++   
Sbjct: 191 ELFEHQKAALGWLVHREESCDL---PPFWEEDNDGGFK---NVLTNQKTNERPPPLK--- 241

Query: 226 GGMFCDEPGLGKTITALSLILKTQG 250
           GG+F D+ GLGKT+T LSLI +++ 
Sbjct: 242 GGIFADDMGLGKTLTLLSLIGRSKA 266


>gi|300796173|ref|NP_001179215.1| helicase-like transcription factor [Bos taurus]
 gi|296491102|tpg|DAA33185.1| TPA: helicase-like transcription factor [Bos taurus]
          Length = 1009

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWMDQFGQHIKSDVHLNFYVYYGPDRVRDPTLLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-VDREWWHRTIQRPVTMGDEAGLRRLQSLIKNITLRRTKT 647



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 853  KSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 912

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 913  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 972

Query: 1110 FLQDTDR 1116
             +Q+T R
Sbjct: 973  -IQNTKR 978



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE N+E L  P + +  ++     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRE-NSEEL--PPFWEQRSD----LYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|452000106|gb|EMD92568.1| hypothetical protein COCHEDRAFT_85422 [Cochliobolus heterostrophus
            C5]
          Length = 684

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 134/639 (20%), Positives = 250/639 (39%), Gaps = 128/639 (20%)

Query: 548  PILGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDS 607
            P+L    A + Q  ++  + F L     +G++ W   +   +    L    + + + + +
Sbjct: 60   PVLEVQKAEQPQSINRRLKPFQL-----EGLS-WMIRQEQTHYKGGLLGDEMGMGKTIQA 113

Query: 608  VRLYLS-----RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW----TDHKKPSAHSLA 658
            V L +S       TL+ VP   +  W  +I+++    +L + V+       KK +   L 
Sbjct: 114  VSLIMSDYPAKHPTLVCVPPVALMQWTNEIREYT-DNKLKVLVYHGTNAKCKKMTVKELK 172

Query: 659  WDYDVVITTFNRLSA-------EWGR-----RKKSPMMQVHWLRVMLDEGHTLGSSLNLT 706
              YDV++ ++N L +        W R     ++ SP+  +++ R++LDE H++ S    T
Sbjct: 173  -SYDVIMVSYNSLESLHRKETKGWSRGEDIIKEASPLHAIYYHRLILDEAHSIKS--RNT 229

Query: 707  NKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYG-------------- 752
               +   +L +  +W L+GTP  N    ++     +L+FL    +               
Sbjct: 230  GVAKACFALRSDYKWCLSGTPVQN----RIGEFFSLLRFLEVRPFADYFCRSCDCEKLHW 285

Query: 753  ----------------QNQKAWDGGILRPFEAEMEEGRSRLLQLLH----RCMISARKTD 792
                            ++   ++  +L P   +  E R   L  LH    R M+   K D
Sbjct: 286  ATNDDHMCVACNHGASEHISVFNQELLNPITGDDPELREEALTKLHLITARIMLRRMKRD 345

Query: 793  -LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS 851
               ++ L +K++            +NE    V R+             S+++    KF +
Sbjct: 346  HTNSMELPMKDIII----------HNEFFSEVERDF----------STSIMSNSSRKFDT 385

Query: 852  TTIRNLRLSCC------------VAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIK 899
               + + L+              VA H  +    +  +   +V V N  D  +++     
Sbjct: 386  YVAQGVMLNNYANIFGLIMQMRQVANHPDLLLKKKAGEGASNVYVCNICDEPAEDAV--- 442

Query: 900  YNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEI-------LTRPENPNPKW 952
                   +C RH  C  C+    + C   G     E   P           +PE    + 
Sbjct: 443  -----RSHC-RHEFCRACIKDFMDTCEASGT----EADCPRCHIALSIDFEQPELEQDED 492

Query: 953  PVPQDLIELQPSYRQWSNTNTF--LKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQ 1010
             + +  I  +     W+++     L  DLY+  L S K    K I+FSQF   + +IE +
Sbjct: 493  SIKKTSIINRIKMENWTSSTKIEMLVYDLYK--LRSKKQTL-KSIVFSQFTSMLQLIEWR 549

Query: 1011 LTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEP 1069
            L  AG     +   M  + + KS+D F  +      L+   A  + L+L+  +RVF+++P
Sbjct: 550  LRRAGFNTVMLDGSMTPAQRQKSIDHFMTNPDVEVFLVSLKAGGVALNLTEASRVFIVDP 609

Query: 1070 IWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             W+ + E Q   R HR+G  RP  +  L +  +VE +M+
Sbjct: 610  WWNPAAEWQSADRCHRIGQRRPCVITRLCIEDSVESRMV 648


>gi|391871732|gb|EIT80889.1| helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box
            superfamily [Aspergillus oryzae 3.042]
          Length = 1021

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 7/141 (4%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF         I + L + G+ F    S +    +   L++FR       LLMD  
Sbjct: 762  EKIIIFYDNNNSAFWIAEGLELLGVDFRIYASTLKPKVRAAYLELFREQEDVRVLLMDLH 821

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             AS GL ++  +RVF++ PIW  ++E Q I RAHR+G TRP+ VETL ++GT+E++MLE 
Sbjct: 822  QASHGLHIANASRVFIVNPIWQPNVESQAIKRAHRIGQTRPVFVETLVLKGTLEDKMLE- 880

Query: 1111 LQDTDRCRRLLKEELVKPERE 1131
                 R + + ++E+ + ER+
Sbjct: 881  -----RRKAMSEKEMQQAERD 896



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 13/131 (9%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP-SAHSLAWDYDVVITT 667
           ++ L  ATLIVVP  LV+HWK +I +H     +++ V  D   P +      +YD+V+ +
Sbjct: 270 QIRLCSATLIVVPPNLVNHWKDEIAKHAE--GVNVLVIQDSSAPVTPPDQLLEYDIVLFS 327

Query: 668 FNRLSAEWG-----RRKK-----SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTA 717
             R   E G     RR       SP+ ++HWLR+++DEGH +    + TN + +   L  
Sbjct: 328 KVRFEKEAGAASNNRRSSTAPDPSPLTKLHWLRIIVDEGHNVAGHGHRTNMVHILDQLHV 387

Query: 718 SNRWLLTGTPT 728
             RW+++GTP+
Sbjct: 388 ERRWIVSGTPS 398



 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 1/99 (1%)

Query: 158 SIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGT 217
           S +P ++  L+P+Q+ +   M+ RE     +  P      T  G  +Y +   G+I    
Sbjct: 89  SCVPYLRTALYPYQRRSAAVMIQREAQPTPMLDPRLKPYVTPTGQEYYYDKEEGNIIREK 148

Query: 218 APTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPP 256
                +  GG+  +  G GKT+  +++IL TQG     P
Sbjct: 149 R-MYSEPRGGILAETMGCGKTLICIAVILATQGHFPQVP 186


>gi|83768080|dbj|BAE58219.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1021

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 7/141 (4%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF         I + L + G+ F    S +    +   L++FR       LLMD  
Sbjct: 762  EKIIIFYDNNNSAFWIAEGLELLGVDFRIYASTLKPKVRAAYLELFREQEDVRVLLMDLH 821

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             AS GL ++  +RVF++ PIW  ++E Q I RAHR+G TRP+ VETL ++GT+E++MLE 
Sbjct: 822  QASHGLHIANASRVFIVNPIWQPNVESQAIKRAHRIGQTRPVFVETLVLKGTLEDKMLE- 880

Query: 1111 LQDTDRCRRLLKEELVKPERE 1131
                 R + + ++E+ + ER+
Sbjct: 881  -----RRKAMSEKEMQQAERD 896



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 13/131 (9%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP-SAHSLAWDYDVVITT 667
           ++ L  ATLIVVP  LV+HWK +I +H     +++ V  D   P        +YD+V+ +
Sbjct: 270 QIRLCSATLIVVPPNLVNHWKDEIAKHAE--GVNVLVIQDSSAPVPPPDQLLEYDIVLFS 327

Query: 668 FNRLSAEWG-----RRKK-----SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTA 717
             R   E G     RR       SP+ ++HWLR+++DEGH +    + TN + +   L  
Sbjct: 328 KVRFEKEAGAASNNRRSSTAPGPSPLTKLHWLRIIVDEGHNVAGHGHRTNMVHILDQLHV 387

Query: 718 SNRWLLTGTPT 728
             RW+++GTP+
Sbjct: 388 ERRWIVSGTPS 398



 Score = 44.7 bits (104), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 1/99 (1%)

Query: 158 SIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGT 217
           S +P ++  L+P+Q+ +   M+ RE     +  P      T  G  +Y +   G+I    
Sbjct: 89  SCVPYLRTALYPYQRRSAAVMIQREAQPTPMLDPRLKPYVTPTGQEYYYDKEEGNIIREK 148

Query: 218 APTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPP 256
                +  GG+  +  G GKT+  +++IL TQG     P
Sbjct: 149 R-MYSEPRGGILAETMGCGKTLICIAVILATQGHFPQVP 186


>gi|74189972|dbj|BAE24607.1| unnamed protein product [Mus musculus]
          Length = 642

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAW--DYDVVITTFNR 670
           +RATLI+ P  ++ +W  Q  QHV+  ++HL  +  +        AW    D+++TT+N 
Sbjct: 469 TRATLIICPLSVLSNWIDQFGQHVK-SEVHLNFYVYYGPDRIRDSAWLSKQDIILTTYNI 527

Query: 671 LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
           L+ ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N
Sbjct: 528 LTHDYGTKDDSPLHSIKWLRVILDEGHAIRNP--NAQQTKAVLELEAERRWVLTGTPIQN 585

Query: 731 TPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK 790
           +    L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   K
Sbjct: 586 S----LKDLWSLLSFLKLKPF-IDREWWYRIIQRPVTTGDEGGLRRLQSLIKNITLRRTK 640

Query: 791 T 791
           T
Sbjct: 641 T 641



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 10/94 (10%)

Query: 153 RCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGD 212
           R +       ++  L PHQ+ A+ WM+ RE + E+   P + +   +     Y NT++ +
Sbjct: 226 RTVEMEPAEAIETPLLPHQKQALAWMIARENSKEL---PPFWEQRND----LYYNTIT-N 277

Query: 213 IATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
            +    P   + HGG+  D+ GLGKT+TA+++IL
Sbjct: 278 FSVKERP--ENVHGGILADDMGLGKTLTAIAVIL 309


>gi|238485918|ref|XP_002374197.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357]
 gi|220699076|gb|EED55415.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357]
          Length = 806

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 7/141 (4%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF         I + L + G+ F    S +    +   L++FR       LLMD  
Sbjct: 547  EKIIIFYDNNNSAFWIAEGLELLGVDFRIYASTLKPKVRAAYLELFREQEDVRVLLMDLH 606

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             AS GL ++  +RVF++ PIW  ++E Q I RAHR+G TRP+ VETL ++GT+E++MLE 
Sbjct: 607  QASHGLHIANASRVFIVNPIWQPNVESQAIKRAHRIGQTRPVFVETLVLKGTLEDKMLE- 665

Query: 1111 LQDTDRCRRLLKEELVKPERE 1131
                 R + + ++E+ + ER+
Sbjct: 666  -----RRKAMSEKEMQQAERD 681



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 13/131 (9%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP-SAHSLAWDYDVVITT 667
           ++ L  ATLIVVP  LV+HWK +I +H     +++ V  D   P        +YD+V+ +
Sbjct: 108 QIRLCSATLIVVPPNLVNHWKDEIAKHAE--GVNVLVIQDSSAPVPPPDQLLEYDIVLFS 165

Query: 668 FNRLSAEWG-----RRKK-----SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTA 717
             R   E G     RR       SP+ ++HWLR+++DEGH +    + TN + +   L  
Sbjct: 166 KVRFEKEAGAASNNRRSSTAPDPSPLTKLHWLRIIVDEGHNVAGHGHRTNMVHILDQLHV 225

Query: 718 SNRWLLTGTPT 728
             RW+++GTP+
Sbjct: 226 ERRWIVSGTPS 236


>gi|451854198|gb|EMD67491.1| hypothetical protein COCSADRAFT_136512 [Cochliobolus sativus ND90Pr]
          Length = 1014

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 135/639 (21%), Positives = 254/639 (39%), Gaps = 128/639 (20%)

Query: 548  PILGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDS 607
            P+L    A + Q  ++  + F L     +G++ W   +   +    L    + + + + +
Sbjct: 390  PVLEVQKAEQPQSINRRLKPFQL-----EGLS-WMIRQEQTHYKGGLLGDEMGMGKTIQA 443

Query: 608  VRLYLS-----RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW----TDHKKPSAHSLA 658
            V L +S     + TL+ VP   +  W  +I+++    +L + V+       KK +   L 
Sbjct: 444  VSLIMSDYPAKQPTLVCVPPVALMQWTNEIREYT-DNKLKVLVYHGTNAKCKKMTVKELK 502

Query: 659  WDYDVVITTFNRLSA-------EWGR-----RKKSPMMQVHWLRVMLDEGHTLGSSLNLT 706
              YDV++ ++N L +        W R     ++ SP+  +++ R++LDE H++ S    T
Sbjct: 503  -SYDVIMVSYNSLESLHRKETKGWSRGEDIIKEASPLHAIYYHRLILDEAHSIKS--RNT 559

Query: 707  NKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYG-------------- 752
               +   +L +  +W L+GTP  N    ++     +L+FL    +               
Sbjct: 560  GVAKACFALRSDYKWCLSGTPVQN----RIGEFFSLLRFLEVRPFADYFCRSCDCEKLHW 615

Query: 753  ----------------QNQKAWDGGILRPFEAEMEEGRSRLLQLLH----RCMISARKTD 792
                            ++   ++  +L P   +  E R   L  LH    R M+   K D
Sbjct: 616  ATNDDHMCVACNHGASEHISVFNQELLNPITGDDPELREEALTKLHLITARIMLRRMKRD 675

Query: 793  -LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS 851
               ++ L +K++            +NE    V R+             S+++    KF +
Sbjct: 676  HTNSMELPMKDIII----------HNEFFSEVERDFST----------SIMSNSSRKFDT 715

Query: 852  TTIRNLRLSCC------------VAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIK 899
               + + L+              VA H  +    +  +   +V V N  D  +++     
Sbjct: 716  YVAQGVMLNNYANIFGLIMQMRQVANHPDLLLKKKAGEGASNVYVCNICDEPAEDAV--- 772

Query: 900  YNLLNGGNCLRHILCLDCVA--MDSEKCS-----LPGCGFLYEMQSPEILTRPENPNPKW 952
                   +C RH  C  C+   MD+ + S      P C     +       +PE    + 
Sbjct: 773  -----RSHC-RHEFCRACIKDFMDTCEASGTEADCPRCHIALSID----FEQPELEQDED 822

Query: 953  PVPQDLIELQPSYRQWSNTNTF--LKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQ 1010
             V +  I  +     W+++     L  DLY+  L S K    K I+FSQF   + +IE +
Sbjct: 823  SVKKTSIINRIKMENWTSSTKIEMLVYDLYK--LRSKKQTL-KSIVFSQFTSMLQLIEWR 879

Query: 1011 LTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEP 1069
            L  AG     +   M  + + KS+D F  +      L+   +  + L+L+  +RVF+++P
Sbjct: 880  LRRAGFNTVMLDGSMTPAQRQKSIDHFMTNPDVEVFLVSLKAGGVALNLTEASRVFIVDP 939

Query: 1070 IWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             W+ + E Q   R HR+G  RP  +  L +  +VE +M+
Sbjct: 940  WWNPAAEWQSADRCHRIGQRRPCVITRLCIEDSVESRMV 978


>gi|395833087|ref|XP_003789577.1| PREDICTED: helicase-like transcription factor [Otolemur garnettii]
          Length = 983

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 450 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDSALLSKQDIVLTTYNILT 509

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 510 HDYGTKGDSPLHSIKWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 566

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 567 ---LKDLWSLLSFLKLKPF-LDREWWHRTIQRPVTMGDEGGLRRLQSLIKNTTLRRTKT 621



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + ++E  L  AG  F  +   M    +++S+  F++  +    + LL  
Sbjct: 827  KSLVVSQFTTFLTLLETPLKAAGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 886

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 887  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLQ 946

Query: 1110 FLQDTDR 1116
             +Q+T R
Sbjct: 947  -IQNTKR 952



 Score = 47.4 bits (111), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +      D  Y+  NT++ + +    P   + HG
Sbjct: 211 LLPHQKQALAWMVSRENSKEL--PPFW---EQRDDLYY--NTIT-NFSEKDRP--ENVHG 260

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+T +++IL
Sbjct: 261 GILADDMGLGKTLTVIAVIL 280


>gi|159124373|gb|EDP49491.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163]
          Length = 1141

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 12/160 (7%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           LS++TL+V P  L+  W+++I   +    +L + V+  + +  A      YDVVITT+  
Sbjct: 421 LSKSTLVVAPLALIKQWESEIATKIEDSHKLRVCVYHGNTRAKATDSLDTYDVVITTYGT 480

Query: 671 LSAEWG----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           L++E+G     +KK+ +  V+W R++LDE HT+ +        Q A +L A  RW L+GT
Sbjct: 481 LTSEYGAVDKNKKKAGLFSVYWYRIVLDEAHTIKN--RNAKATQSACALDAEYRWCLSGT 538

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF 766
           P  N     L  LQ ++KFL  + Y  +  AW   I RP 
Sbjct: 539 PMQNN----LDELQSLIKFLRIKPY-NDLAAWKDQITRPL 573



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L  AGI FA     M +  +  SLD  RH+++   LL    +
Sbjct: 921  KFIVFSVFTSMLDKIEPFLKRAGIGFARYDGSMRNDLREASLDKLRHNSATRVLLCSLRA 980

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             +LGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  + ++ TVEE++LE L
Sbjct: 981  GALGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKMIIKETVEERILE-L 1039

Query: 1112 QDTDR 1116
            QD  R
Sbjct: 1040 QDRKR 1044


>gi|121699521|ref|XP_001268048.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1]
 gi|119396190|gb|EAW06622.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1]
          Length = 1147

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 20/191 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           LS++TL+V P  L+  W+++I   V    +L + V+  + +  A      YDVVITT+  
Sbjct: 425 LSKSTLVVAPLALIKQWESEIAAKVEASHKLRVCVYHGNTRAKATDNLDTYDVVITTYGT 484

Query: 671 LSAEWG----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           L++E+G      KK+ +  V+W R++LDE HT+ +        Q A +L A  RW L+GT
Sbjct: 485 LTSEYGAVDKSSKKTGLFSVYWYRIILDEAHTIKN--RNAKATQSACALDAEYRWCLSGT 542

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLH 782
           P  N     L  LQ ++KFL  + Y  +  AW   I RP    +  GR  L    LQ+  
Sbjct: 543 PMQNN----LDELQSLIKFLRIKPY-NDLAAWRDQITRP----LANGRGGLAIERLQVYL 593

Query: 783 RCMISARKTDL 793
           +  +  R  D+
Sbjct: 594 KAFMKRRTKDV 604



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L  AGI FA     M + ++  SL+  R++++   LL    +
Sbjct: 926  KFIVFSVFTSMLDKIEPFLKRAGIGFARYDGSMRNDHREASLNKLRNNSATRVLLCSLRA 985

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             +LGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  + ++ TVEE++LE L
Sbjct: 986  GALGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKMIIKETVEERILE-L 1044

Query: 1112 QDTDR 1116
            QD  R
Sbjct: 1045 QDRKR 1049


>gi|22326612|ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana]
 gi|20260624|gb|AAM13210.1| helicase-like transcription factor-like protein [Arabidopsis
           thaliana]
 gi|31711770|gb|AAP68241.1| At5g05130 [Arabidopsis thaliana]
 gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis thaliana]
          Length = 862

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           + TLIV P  ++  W TQ+++H  PG L ++++   ++    +    YD+V+TT+  L+ 
Sbjct: 339 KTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMKYDIVLTTYGTLAV 398

Query: 674 E--WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
           E  W   + SP+ ++ WLR++LDE HT+ ++     + ++   L AS RW +TGTP  N 
Sbjct: 399 EESW---EDSPVKKMEWLRIILDEAHTIKNA--NAQQSRVVCKLKASRRWAVTGTPIQNG 453

Query: 732 PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
                  L  ++ FL  E +   +  W   I RP     ++G SRL  L+    IS R+T
Sbjct: 454 S----FDLYSLMAFLRFEPFSI-KSYWQSLIQRPLGQGNKKGLSRLQVLM--ATISLRRT 506

Query: 792 ---DLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
               L  +P    E  ++  + E    Y+ +
Sbjct: 507 KEKSLIGLPPKTVETCYVELSPEERQLYDHM 537



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 4/143 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHD--ASCLALLMDG 1050
            K ++FSQF + + ++E  L  AG     +   M    + + +  F +      + LL   
Sbjct: 708  KSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASL 767

Query: 1051 SAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             AS  G++L+  +RV+L +P W+ ++EEQ + R HR+G  + + +  +  R ++EE++LE
Sbjct: 768  KASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLE 827

Query: 1110 FLQ-DTDRCRRLLKEELVKPERE 1131
              Q   +      K    K ERE
Sbjct: 828  LQQKKKNLANEAFKRRQKKDERE 850



 Score = 48.9 bits (115), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 10/84 (11%)

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTM 221
            +K +LF HQ+  + W+LHRE + E+   P + +   +DG +   NT++   +      +
Sbjct: 207 VIKSELFAHQKEGLGWLLHREKSGEL--PPFWEE---KDGEFL--NTLTNYRSDKRPDPL 259

Query: 222 RDFHGGMFCDEPGLGKTITALSLI 245
           R   GG+F D+ GLGKT+T LSLI
Sbjct: 260 R---GGVFADDMGLGKTLTLLSLI 280


>gi|60390959|sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 1; Short=SMARCA3-like protein 1
 gi|10178052|dbj|BAB11535.1| helicase-like transcription factor-like protein [Arabidopsis
           thaliana]
          Length = 881

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 17/211 (8%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           + TLIV P  ++  W TQ+++H  PG L ++++   ++    +    YD+V+TT+  L+ 
Sbjct: 358 KTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMKYDIVLTTYGTLAV 417

Query: 674 E--WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
           E  W   + SP+ ++ WLR++LDE HT+ ++     + ++   L AS RW +TGTP  N 
Sbjct: 418 EESW---EDSPVKKMEWLRIILDEAHTIKNA--NAQQSRVVCKLKASRRWAVTGTPIQNG 472

Query: 732 PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
                  L  ++ FL  E +   +  W   I RP     ++G SRL  L+    IS R+T
Sbjct: 473 S----FDLYSLMAFLRFEPFSI-KSYWQSLIQRPLGQGNKKGLSRLQVLM--ATISLRRT 525

Query: 792 ---DLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
               L  +P    E  ++  + E    Y+ +
Sbjct: 526 KEKSLIGLPPKTVETCYVELSPEERQLYDHM 556



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 4/143 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHD--ASCLALLMDG 1050
            K ++FSQF + + ++E  L  AG     +   M    + + +  F +      + LL   
Sbjct: 727  KSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASL 786

Query: 1051 SAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             AS  G++L+  +RV+L +P W+ ++EEQ + R HR+G  + + +  +  R ++EE++LE
Sbjct: 787  KASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLE 846

Query: 1110 FLQ-DTDRCRRLLKEELVKPERE 1131
              Q   +      K    K ERE
Sbjct: 847  LQQKKKNLANEAFKRRQKKDERE 869



 Score = 48.9 bits (115), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 10/84 (11%)

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTM 221
            +K +LF HQ+  + W+LHRE + E+   P + +   +DG +   NT++   +      +
Sbjct: 226 VIKSELFAHQKEGLGWLLHREKSGEL--PPFWEE---KDGEFL--NTLTNYRSDKRPDPL 278

Query: 222 RDFHGGMFCDEPGLGKTITALSLI 245
           R   GG+F D+ GLGKT+T LSLI
Sbjct: 279 R---GGVFADDMGLGKTLTLLSLI 299


>gi|70991923|ref|XP_750810.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293]
 gi|66848443|gb|EAL88772.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293]
          Length = 1141

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 12/160 (7%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           LS++TL+V P  L+  W+++I   +    +L + V+  + +  A      YDVVITT+  
Sbjct: 421 LSKSTLVVAPLALIKQWESEIATKIEDSHKLRVCVYHGNTRAKATDSLDTYDVVITTYGT 480

Query: 671 LSAEWG----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           L++E+G     +KK+ +  V+W R++LDE HT+ +        Q A +L A  RW L+GT
Sbjct: 481 LTSEYGAVDKNKKKAGLFSVYWYRIVLDEAHTIKN--RNAKATQSACALDAEYRWCLSGT 538

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF 766
           P  N     L  LQ ++KFL  + Y  +  AW   I RP 
Sbjct: 539 PMQNN----LDELQSLIKFLRIKPY-NDLAAWKDQITRPL 573



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L  AGI FA     M +  +  SLD  RH+++   LL    +
Sbjct: 921  KFIVFSVFTSMLDKIEPFLKRAGIGFARYDGSMRNDLREASLDKLRHNSATRVLLCSLRA 980

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             +LGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  + ++ TVEE++LE L
Sbjct: 981  GALGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKMIIKETVEERILE-L 1039

Query: 1112 QDTDR 1116
            QD  R
Sbjct: 1040 QDRKR 1044


>gi|47221989|emb|CAG08244.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 965

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 133/580 (22%), Positives = 230/580 (39%), Gaps = 138/580 (23%)

Query: 610  LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
            L  S+ TLI+ P+ LV HW+ +I + V+  +L + ++    +        DYDVV+TT++
Sbjct: 406  LVASKGTLIICPASLVHHWEREISRRVKSSRLSVCLYHGSDRERRAEALADYDVVVTTYS 465

Query: 670  RLSAEW--------------GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-S 714
             +S E                    +P+++V W RV+LDE H +    N   +  MA+  
Sbjct: 466  LVSKEMPVPKEKKEEEEDLTALSASAPLLRVSWDRVVLDEAHNIK---NPKAQTSMAVCR 522

Query: 715  LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGR 774
            L A  RW +TGTP  N     L  +  +LKFLH   + +  K W   +    +     GR
Sbjct: 523  LRARARWAVTGTPIQNN----LLDMYSLLKFLHCSPFDEF-KLWKAQV----DNGSRRGR 573

Query: 775  SRLLQLLHRCMISAR---KTDLQTIPL-CI----KEVTFLNFTEEHAGTYNELVVTVRRN 826
             R L +L R ++  R   +TD    PL C+     EV  L  ++E    Y+ +    R  
Sbjct: 574  ER-LNILTRSLLLRRTKDQTDATGKPLVCLPDRKSEVHRLKLSKEEQAVYDVVFAQSR-- 630

Query: 827  ILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVEN 886
                                     +T++N      +  H + TD G+    +      N
Sbjct: 631  -------------------------STLQNY-----LKRH-EGTDVGKGSASS-----SN 654

Query: 887  GLDPLSQEYAF---------------------IKYNLLNGGNCLRHILCLDCVAMDSEKC 925
              D ++QE+                       I   LL    C  H+  L      SE  
Sbjct: 655  PFDKVAQEFGLSQAAAPASSSQPPQPASSTVHILSLLLRLRQCCCHLSLLKKTLDSSE-- 712

Query: 926  SLPGCGFLYEMQSP-EILTRPENPNPKWPVPQDLIELQ----PSYRQWSNTNTFLKQDLY 980
             L G G +  ++     L+   +P+   P  +D++ L     PS + +  T+   K + Y
Sbjct: 713  -LSGDGIVLSLEEQLSALSLTSSPSQPGPDSKDIVALNGTRFPS-QLFEETSESTKVENY 770

Query: 981  RPNLESNKALPDKVIIFSQF--LEHIHVIEQQLTVAGIKFAGMYSPMHSS---------- 1028
             P + S  + P K   FS +  L  I  I  +L +   K++   S + S           
Sbjct: 771  SPAIFST-SRPFKAFNFSNYSSLLQISAIVSELKMIREKYSDQKSVIVSQWTSMLRIVAV 829

Query: 1029 ----------------NKIKSLDM---FRHDASCLALLMDGSASLGLDLSFV--TRVFLM 1067
                            N  + +D+   F  +A    +++    + G+ L+ +    +FL+
Sbjct: 830  HLRRIGLRYGIIDGTVNPKQRMDLVEEFNTNAKGPQVMLVSLCAGGVGLNLIGGNHLFLI 889

Query: 1068 EPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            +  W+ ++E+Q   R +R+G T+ + +      GTVEE++
Sbjct: 890  DMHWNPALEDQACDRIYRVGQTKDVTIHRFECEGTVEEKI 929


>gi|390604670|gb|EIN14061.1| hypothetical protein PUNSTDRAFT_95600 [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 1184

 Score = 90.5 bits (223), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 72/119 (60%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  IE  L +AGI++  +   M   ++ ++++  +HD +C  LL+   +
Sbjct: 1032 KTVVFSQWTTMLDKIEDALEMAGIRYERLDGTMKRDDRTRAMETLKHDPACEVLLVSLKA 1091

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+   RV+LM+P W+ ++E Q + R HR+G TRP+    L +  T+E ++LE 
Sbjct: 1092 GGVGLNLTAAQRVYLMDPYWNPAVENQAVDRIHRLGQTRPVTTIKLIIENTIEARLLEV 1150



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 113/320 (35%), Gaps = 122/320 (38%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVR--------------------------------PGQ 640
           SRATLI+ P   + +W+ Q ++H R                                P Q
Sbjct: 454 SRATLIICPLSTISNWEEQFKEHWRGPVTVVGGTSGNAASKCSTPSLSSLSLTQSLPPSQ 513

Query: 641 -------------------LHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW------ 675
                              L ++V+  + +    S   D+D VITTF+ L+ E+      
Sbjct: 514 PSLSKLPTDNAQSSHEGRALRVYVYHGNARRPDPSFLADFDAVITTFSTLATEYSKQNRS 573

Query: 676 -----------------------------------GRRKKS------------PMMQVHW 688
                                              G+++K              +  +HW
Sbjct: 574 LASSEADEDEDDEECDGLAEYDGGGHQVVKLSGAKGKKRKKLVTVSSASEASSALQSIHW 633

Query: 689 LRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHE 748
            RV+LDE H++  +   T   + +  L A  R  LTGTP  N    +L  +  ++KFL  
Sbjct: 634 FRVVLDEAHSIKET--GTVGCRASCDLIADRRLCLTGTPVQN----KLDDVFALVKFLRL 687

Query: 749 EAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT---------DLQTIPLC 799
           E +  ++  W   I  P +     G +R LQ + +C I+ R+T          + T+P  
Sbjct: 688 EPF-DDKNVWTEFIGTPVKYGQPLGVAR-LQTIMKC-ITLRRTKETRAQDGQKILTLPPR 744

Query: 800 IKEVTFLNFTEEHAGTYNEL 819
             E+  L F E+    YN+ 
Sbjct: 745 RDELRLLKFDEQEQAIYNQF 764


>gi|242769688|ref|XP_002341821.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218725017|gb|EED24434.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1975

 Score = 90.5 bits (223), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 1/123 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +       I + L + GI F    + + +S K   L +F   +S   LLMD  
Sbjct: 1679 EKIIIFYENNNTAFWIAEGLEMLGIDFRIYANTLKTSQKAAYLSLFEESSSVRVLLMDLR 1738

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             AS GL ++  +RVF++ PIW   +E Q I RAHR+G TRP+ VETL ++ T+EE+ML  
Sbjct: 1739 QASHGLHIASASRVFIVNPIWRPQVESQAIKRAHRIGQTRPVFVETLVLKDTLEEKMLHR 1798

Query: 1111 LQD 1113
             Q+
Sbjct: 1799 RQE 1801



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 12/133 (9%)

Query: 607  SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVIT 666
            +VRL L  +TLIVVP  LVDHW+++I  H     + +    + K PS   L   YD+++ 
Sbjct: 1167 AVRLRLISSTLIVVPPNLVDHWQSEIASHTEGLNVLVLRSRNDKTPSEEEL-LKYDIILF 1225

Query: 667  TFNRLSAEWGR-----------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISL 715
               R   E G              +SP+ + HWLR+++DEGH +      +N + M   L
Sbjct: 1226 ARTRFEKEAGEPDANRHASPIATAESPLKKFHWLRIIVDEGHNVAGHGYKSNTMHMLDKL 1285

Query: 716  TASNRWLLTGTPT 728
                RW+++GTP+
Sbjct: 1286 HVERRWVVSGTPS 1298


>gi|358385276|gb|EHK22873.1| hypothetical protein TRIVIDRAFT_149973, partial [Trichoderma virens
            Gv29-8]
          Length = 788

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 119/517 (23%), Positives = 209/517 (40%), Gaps = 90/517 (17%)

Query: 611  YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD---VVITT 667
            Y    TLIVVP  L+  W+ Q+ +HV  G +    W  H         ++ D   VV+TT
Sbjct: 295  YAVPTTLIVVPPPLLGTWEEQLTEHVVAGSME---WRCHYGKKKFVDKYELDSVNVVLTT 351

Query: 668  FNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGT 726
            ++ +SAEW           H++R             N  +++  A+ +L + +RW +TGT
Sbjct: 352  YHTVSAEWKTGNSILFSIPHYIR-------------NGNSRMAQAVCALDSISRWAVTGT 398

Query: 727  PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
            P  N    +L  L  +L+F+    Y  + K +D  I R +++  +E   R L+ L  C++
Sbjct: 399  PIQN----RLGDLATLLRFIRAHPY-TDPKVFDADISRLWKSGGDEEAVRRLKHLSACLL 453

Query: 787  SARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI--LMADWNDPSHVESLLNP 844
              R      +P        ++F+ E    Y E+       I  ++ + ++ S     +N 
Sbjct: 454  LRRPKATINLPQRRDMRCPVDFSREEKALYEEIREQAATKIEEVLQNNSEASRAGGFVNV 513

Query: 845  KQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLN 904
             Q       I +LRL C +  H       +D+Q+         L   + ++A +     N
Sbjct: 514  LQ------QIESLRLVCDLGIHYH--SRHQDLQQ---------LTAEATDWASVAQETFN 556

Query: 905  GGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPS 964
                +  I+C  C +                ++  E L    NP    P           
Sbjct: 557  VQRGMGPIVCAQCSST---------------LELSEALFDESNPTHTSP----------- 590

Query: 965  YRQWSNTNTFLKQD-LYRPNLESNKAL----PDKVIIFSQFLEHIHVIEQQLTVAGIKFA 1019
              ++S    F+  D +++    S  A+    P   I        +      LT   IKF 
Sbjct: 591  --EFSRCLRFVCGDCMHKMGRASRIAVCRHKPSCPIAPVSTSTSVFEDVSSLTSPQIKFP 648

Query: 1020 GMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQV 1079
                P    +K+K+L       + +  L  G+  L   L+  +R +LMEP W+ ++EEQ 
Sbjct: 649  STGLP----SKVKAL------VADIKSLPPGTKCL--TLTVASRAYLMEPHWNPTLEEQA 696

Query: 1080 ISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            ++R HR+G  + +      MR + EE ++E LQ++ +
Sbjct: 697  LARIHRIGQAQEVTTVRFYMRDSFEEHVME-LQESKK 732



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 4/93 (4%)

Query: 153 RCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYI-DLATEDGFYFYVNTVSG 211
           + + A++    KL    HQ+ A+ ++L RE       HP  I  +   D    +VN +S 
Sbjct: 183 KAIQATLQSYCKLTSSSHQKKALTFLLRREKGWAFDAHPSDIWGMVDRDQGRIFVNKISS 242

Query: 212 DIATGTAPTMRDFHGGMFCDEPGLGKTITALSL 244
              +   P    F+GG+  D  GLGKT+T ++L
Sbjct: 243 TYQSEAPP---QFYGGIIADPMGLGKTLTMIAL 272


>gi|168229242|ref|NP_001108200.1| helicase-like transcription factor isoform alpha [Oryctolagus
           cuniculus]
 gi|60390953|sp|Q95216.1|HLTF_RABIT RecName: Full=Helicase-like transcription factor; AltName:
           Full=RUSH-1; AltName: Full=SWI/SNF-related
           matrix-associated actin-dependent regulator of chromatin
           subfamily A member 3; AltName: Full=Sucrose
           nonfermenting protein 2-like 3
 gi|1655930|gb|AAC18656.1| RUSH-1alpha [Oryctolagus cuniculus]
          Length = 1005

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 17/202 (8%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 473 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILT 532

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 533 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 589

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT- 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 590 ---LKDLWSLLSFLKLKPF-VDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTS 645

Query: 792 --------DLQTIPLCIKEVTF 805
                   +L   P+ I+ +T 
Sbjct: 646 KIKGKPVLELPERPVFIQHITL 667



 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 850  KSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 909

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+L   +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 910  KAGGVGLNLCAASRVFLMDPAWNPAAEDQRFDRCHRLGQKQEVIITKFIVKDSVEENMLK 969

Query: 1110 FLQDTDR 1116
             +Q+T R
Sbjct: 970  -IQNTKR 975



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P + +L  +     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSREL---PPFWELRND----LYYNTIT-NFSEKDQP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|350591625|ref|XP_003358653.2| PREDICTED: helicase-like transcription factor [Sus scrofa]
          Length = 1008

 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 475 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRVRDPALLSKQDIVLTTYNILT 534

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 535 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 591

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 592 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 646



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 852  KSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 911

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 912  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 971

Query: 1110 FLQDTDR 1116
             +Q+T R
Sbjct: 972  -IQNTKR 977



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P + +  ++     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL---PPFWEQRSD----LYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|126723774|ref|NP_001075845.1| helicase-like transcription factor isoform beta [Oryctolagus
           cuniculus]
 gi|1655932|gb|AAC48693.1| RUSH-1beta [Oryctolagus cuniculus]
          Length = 836

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 17/202 (8%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 473 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILT 532

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTGTP  N+ 
Sbjct: 533 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLEAERRWVLTGTPIQNS- 589

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT- 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT 
Sbjct: 590 ---LKDLWSLLSFLKLKPF-VDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTS 645

Query: 792 --------DLQTIPLCIKEVTF 805
                   +L   P+ I+ +T 
Sbjct: 646 KIKGKPVLELPERPVFIQHITL 667



 Score = 51.2 bits (121), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P + +L  +     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSREL---PPFWELRND----LYYNTIT-NFSEKDQP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|390602118|gb|EIN11511.1| hypothetical protein PUNSTDRAFT_111629 [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 1056

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 102/219 (46%), Gaps = 30/219 (13%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           SR+TLIVVP  ++ +W+TQ++ HV PG L H   +   +  +A  L   YDVVITT+  +
Sbjct: 400 SRSTLIVVPLSILSNWETQLKDHVVPGALTHCVYYGSSRNMTAKELQ-KYDVVITTYQTV 458

Query: 672 SAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SL 715
           + E    KK                 +  V W RV+LDEGH +    N   K+  A+ +L
Sbjct: 459 TGEHPEPKKDGEPVKKKKKVTAAKGALFDVQWKRVILDEGHQI---RNPKTKMARAVCAL 515

Query: 716 TASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS 775
            A  RW+LTGTP  N+P      L  +L FL   A   N+  +   I+RP +     G  
Sbjct: 516 AAQRRWVLTGTPIINSPRD----LGSILTFLRVCAPLDNEDMFKRLIIRPLKDGDPSGAE 571

Query: 776 RLLQLL-----HRCMISARKTDLQTIPLCIKEVTFLNFT 809
            L  ++     HR      K     +PL   E+T +  T
Sbjct: 572 LLRAVMSSICIHRTKEMKDKNGNHLVPLPPVEMTVIPVT 610



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)

Query: 1027 SSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRM 1086
            S  + ++ D  R     + L+   + +LGL+L+    V+L    W   +E Q I R +R+
Sbjct: 929  SKARARTEDDIRVANPKVMLISLKAGALGLNLTVANNVYLW---WQEGIESQAIDRCNRI 985

Query: 1087 GATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKE 1123
            G  +P+HV  L    TVE ++LE     DR + L+KE
Sbjct: 986  GQKKPVHVYQLIAENTVESKVLEI---QDRKKLLIKE 1019



 Score = 43.5 bits (101), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 11/96 (11%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNA---EVLRHPLYI---DLATEDGFYFYVNTVSGDIATG 216
           +++ L  HQ  A++W + +E+     +    P+        T+  FYF + T +  +   
Sbjct: 305 LRVDLLKHQSQALQWCITKEYPTLPKKEADKPVQFWQYKKGTQKPFYFNLATKTPQV--- 361

Query: 217 TAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTL 252
            AP +    GG+  D  GLGKT+T ++LI+ TQG +
Sbjct: 362 DAPLL--GRGGLNADSMGLGKTLTMIALIMATQGDI 395


>gi|50555271|ref|XP_505044.1| YALI0F05698p [Yarrowia lipolytica]
 gi|74632870|sp|Q6C2R8.1|RAD5_YARLI RecName: Full=DNA repair protein RAD5
 gi|49650914|emb|CAG77851.1| YALI0F05698p [Yarrowia lipolytica CLIB122]
          Length = 1025

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 145/683 (21%), Positives = 270/683 (39%), Gaps = 138/683 (20%)

Query: 516  LLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSYAAGETQGFHKIFQAFGLIRRVE 575
            L +    K+ LTW+      E+SE      + PI   +   +  G  + F          
Sbjct: 365  LELRRYQKQGLTWMIS-RETEVSEYFDNDDSGPINPLWTKVDFPGSDEKFYV-----NFS 418

Query: 576  KGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRL-YLSR---ATLIVVPSYLVDHWKTQ 631
             G     +PK   + +  + A  + L + + ++ + Y  R    TL+V P  L+  W+ +
Sbjct: 419  SGALTLKFPKQERSFSGGILADEMGLGKTISTLAMVYRDRHVGCTLVVAPMSLLWQWEQE 478

Query: 632  IQQHVRPGQLHLFVWTDHKKPSAHSL-----AWDYDVVITTFNRLSAEWGRRK------- 679
             ++      + L  +  H+K +   L      +  +++IT+++ L + +G+ K       
Sbjct: 479  CER------VGLSTYVYHEKGADIDLDELFKTYSPNILITSYHTLVSHYGQIKALGGGLD 532

Query: 680  -----------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
                       +  +   H+ R++LDE H + +   ++ K      L A+N+W LTGTP 
Sbjct: 533  RNVISETSSHERPKIFTKHFHRIVLDEAHVIKNRNTVSAK--ACCLLRATNKWALTGTPI 590

Query: 729  PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCM--- 785
             N    +L  L  +LKFL    +  +   W   I  PF+    EG+     +  +C+   
Sbjct: 591  HN----RLEDLFSILKFLGAAPWN-DFIYWRNFITLPFQ----EGKIVSALMTVQCILEP 641

Query: 786  ISARKTD---------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPS 836
            I  R+T          L  +P     +  +  T++    Y+ ++   + ++  ++ ++  
Sbjct: 642  IVLRRTKNMKQADGSPLVVLPKKTINIEKVALTDQERVIYSYVLARAQTSLQKSEASEAV 701

Query: 837  HVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLV-ENGLDPLSQEY 895
                    + +    T I  LR SCC    I   +A     E + +   E+ L  + Q+Y
Sbjct: 702  G-------RNYLNILTQILRLRQSCCDPALILRPEAEVPTDEQLQIEENESQLKSMIQQY 754

Query: 896  ------AFIKYN------------------------LLNGGNCLRHILCLDCVA----MD 921
                  +  +Y+                         L    CL H+ C+DC+A      
Sbjct: 755  NDDTQTSACEYSSEIIAQLQDQSAPPECPICAEDVTKLAISKCL-HMGCVDCLADNVRFQ 813

Query: 922  SEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYR 981
              K   P C      + P  L             +D+ E++ +     +    LK+   R
Sbjct: 814  ESKKQTPVCCIC---RQPAAL-------------KDIFEVERTGEDCKDIR--LKKLSDR 855

Query: 982  PN-------LESNKALPD--KVIIFSQFLEHIHVIEQQL---TVAGIKFAGMYSPMHSSN 1029
            P        +   K LP   K ++FSQF  ++ +I+ +L    +   +F G  S    ++
Sbjct: 856  PRSSKLVALVSKLKQLPKDAKSVVFSQFTSYLDIIQTELRREKIQAFRFDGTLSRQQRTD 915

Query: 1030 KIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGAT 1089
             +K+  + +     ++L   G   +GL+L      F+M+P W  + E Q I R HRMG T
Sbjct: 916  VLKAFGLSKGSVLLISLKTGG---VGLNLVTANHAFIMDPWWTFAQEAQAIDRIHRMGQT 972

Query: 1090 RPIHVETLAMRGTVEEQMLEFLQ 1112
            + +HV    +  +VEE+ML+  Q
Sbjct: 973  KDVHVTRFIVENSVEEKMLKIQQ 995



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 15/95 (15%)

Query: 165 LKLFPHQQAAVEWMLHREWNAEVLRH----------PLY--IDLATEDGFYFYVNTVSGD 212
           L+L  +Q+  + WM+ RE   EV  +          PL+  +D    D   FYVN  SG 
Sbjct: 365 LELRRYQKQGLTWMISRE--TEVSEYFDNDDSGPINPLWTKVDFPGSDE-KFYVNFSSGA 421

Query: 213 IATGTAPTMRDFHGGMFCDEPGLGKTITALSLILK 247
           +        R F GG+  DE GLGKTI+ L+++ +
Sbjct: 422 LTLKFPKQERSFSGGILADEMGLGKTISTLAMVYR 456


>gi|302510062|ref|XP_003016991.1| hypothetical protein ARB_05285 [Arthroderma benhamiae CBS 112371]
 gi|291180561|gb|EFE36346.1| hypothetical protein ARB_05285 [Arthroderma benhamiae CBS 112371]
          Length = 1055

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 32/247 (12%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           +S++TL+V P  L+  W+++I+  + R  +L + V+    +         +DVVITT+  
Sbjct: 339 VSKSTLVVAPLALIKQWESEIESKIERSHRLSVCVYHGTGRTKHRDDLDSFDVVITTYGT 398

Query: 671 LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTP 729
           LS+E G  K      VHW R++LDE HT+    N   K   A+ +L +  RW LTGTP  
Sbjct: 399 LSSEHG--KSDGCFGVHWYRIVLDEAHTIK---NRNAKATQAVYALNSQYRWCLTGTPLQ 453

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRCM 785
           N     L  LQ +++FL  + Y +   AW   I RP    M  GR     R LQ+  +  
Sbjct: 454 NN----LDELQSLIRFLRIKPYDE-LAAWREQITRP----MSNGRGGLALRRLQVYLKAF 504

Query: 786 ISARKTD---LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
           +  R  D   L + P  I++      + +     +E    V+R+I+         +E+  
Sbjct: 505 MKRRTKDVLKLDSKP-DIEDSNEEELSSDQKQRPSEGFKIVKRDIV--------KIEAEF 555

Query: 843 NPKQWKF 849
           +P++W F
Sbjct: 556 SPEEWAF 562



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 4/131 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L   GI +A     M +  +  SL+  R+ +    LL    +
Sbjct: 833  KFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASLNRLRNSSGTRVLLCSLRA 892

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L ++GTVEE++LE  
Sbjct: 893  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKVYKLTIKGTVEERILEL- 951

Query: 1112 QDTDRCRRLLK 1122
               +R R L K
Sbjct: 952  --QERKRELAK 960


>gi|322695761|gb|EFY87564.1| DNA repair and recombination protein RAD5B [Metarhizium acridum
           CQMa 102]
          Length = 1030

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 25/224 (11%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           S  TLIV P  ++ +W+ QI +HV+P  L  + V+   K+ +A  L  ++DVVIT++ +L
Sbjct: 590 SGTTLIVAPVGVMTNWQQQIDRHVKPEYLPSVLVYHGDKRMTAKEL-MNFDVVITSYGKL 648

Query: 672 SAEWGRRKKSPMMQV------HWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLT 724
           +    R K S + QV       W RV+LDEGHT+    N   K+ +A  ++ A +RW+LT
Sbjct: 649 A----REKDSNVPQVLLSQSIQWKRVVLDEGHTI---RNARTKVALAACAINAQSRWVLT 701

Query: 725 GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRC 784
           GTP  N+    +  LQ ++KFLH     ++ + ++  I R   A  +     +LQ L + 
Sbjct: 702 GTPIINS----VRDLQSLIKFLHITGGIEHPEIFNTRITRRL-ASGDASAEIMLQALMQD 756

Query: 785 MISARKTDLQTIPLCIKE----VTFLNFTEEHAGTYNELVVTVR 824
           +   RK D++ + L I E    +  + F  E    Y  L+   R
Sbjct: 757 ICLRRKKDMKFVDLKIPEKKEYLHRIAFHPEEKRKYEALLTEAR 800



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 86/154 (55%), Gaps = 5/154 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            KV+IFSQ+   +++++ QL  AGIK++ +   M++  + +++    +DA    +L     
Sbjct: 877  KVVIFSQWTSFLNIVQNQLDGAGIKYSRIDGSMNTEKRDRAVQALDNDAETRVMLASLAV 936

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S+GL+L     V L +  W  ++E+Q I R HR+G TR   V  L + G+VEE++L+  
Sbjct: 937  CSVGLNLVSADTVILSDSWWAPAIEDQAIDRVHRLGQTRKTTVWRLIVEGSVEERVLDIQ 996

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHRT-LHDFAE 1144
            ++    R L+ +   + ER+G  +  T + D A+
Sbjct: 997  KEK---RDLVTKAFQEKERKGKHTKDTRMADIAK 1027



 Score = 48.5 bits (114), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 8/106 (7%)

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEVLRHPL--YIDLATEDGFYFYVNTVSGDIATGTAP 219
            +K  L P+Q   + WM  +E N  +    L   + L  +D    Y N V+ D  + TAP
Sbjct: 504 ALKATLLPYQLQGLAWMTSKE-NPALPTKELGNQVQLWKQDNRGHYWN-VATDFVSTTAP 561

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLILK--TQGTLADPPDGVKIIW 263
            +  F GG+  D+ GLGKT+  LSLIL   +  TL   P GV   W
Sbjct: 562 QL--FSGGILADDMGLGKTLQILSLILTGGSGTTLIVAPVGVMTNW 605


>gi|258567350|ref|XP_002584419.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237905865|gb|EEP80266.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 1216

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 7/141 (4%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +   +   + + L + G++F    S +  + K + L MF +      LLMD  
Sbjct: 933  EKIIIFYENNNNAFWVAEGLEILGVEFRIYASTLKPNLKSEYLSMFNNSEEVRVLLMDLR 992

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             AS GL ++  +R+F++ PIWD ++E Q I RAHR+  TRP++VETL +R T+E++ML  
Sbjct: 993  QASHGLHVASASRIFIINPIWDPNIESQAIKRAHRISQTRPVYVETLVLRNTLEDKMLR- 1051

Query: 1111 LQDTDRCRRLLKEELVKPERE 1131
                 R +++   E+   ER+
Sbjct: 1052 -----RRKQMSNAEMQHAERD 1067



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 4/126 (3%)

Query: 606 DSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVI 665
           D + + LS  TL++VP  LVDHW  +I++H +  +L +        P   SL  +YD+++
Sbjct: 418 DKITVQLSSGTLVIVPPNLVDHWLHEIRKHTQGLKLLVLRNKSDLTPPVISL-LEYDIIL 476

Query: 666 TTFNRLSAEWGR---RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            +  R   E G    +  SP+ ++HWLR+++DEGH   S+   +N +     L    RW+
Sbjct: 477 FSRTRFEGENGDPLLQPPSPLKEIHWLRIIVDEGHNFASTGGKSNAIHFLDQLHVERRWV 536

Query: 723 LTGTPT 728
           ++GTP+
Sbjct: 537 VSGTPS 542


>gi|296227865|ref|XP_002759553.1| PREDICTED: helicase-like transcription factor [Callithrix jacchus]
          Length = 1009

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 853  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 912

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 913  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 972

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 973  -IQNKKR 978



 Score = 49.3 bits (116), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|358393207|gb|EHK42608.1| hypothetical protein TRIATDRAFT_224421 [Trichoderma atroviride IMI
            206040]
          Length = 765

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 127/547 (23%), Positives = 216/547 (39%), Gaps = 147/547 (26%)

Query: 616  TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD---VVITTFNRLS 672
            TLI++P  L+  W+ Q+ +HV  G L    W  H   +  +  +D D   VV+TT++ +S
Sbjct: 294  TLIIIPPPLLGTWEEQLSEHVVAGGLK---WQRHYGKTRFTSRYDLDDVNVVLTTYHTVS 350

Query: 673  AEWG--RRKKSPMMQVH-------WLRVMLDEGHTLGSSLNLTNKLQMAISLTASN---R 720
            AEW   R  +S ++  H       W+   +  G           K +MA S+ A +   R
Sbjct: 351  AEWKNEREAESSILFSHQNSQHLTWIAHFIRNG-----------KSRMAHSICALDSIAR 399

Query: 721  WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
            W +TGTP  N    +L  L  +LKF+    Y  + + +D  I   +++  +E  ++ LQ 
Sbjct: 400  WAVTGTPIQN----RLGDLASLLKFIRVYPY-TDPRHFDADIAHFWKSGQDEEAAKRLQR 454

Query: 781  LHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNEL--VVTVRRNILMADWNDPSHV 838
            L  C++  R      +P        ++F+ E    Y  +     +R +  +   ++ S  
Sbjct: 455  LSACILLRRPKTTINLPPRQDLRCPIDFSREEREMYAAIREQAIIRIDEALQSNSERSRA 514

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHI------------KVTDAGEDIQETMDV---- 882
               +N  Q       I +LRL C +  H             + +D   D Q+T +V    
Sbjct: 515  SVYVNVLQ------QIESLRLVCNLGLHYHARHQKSLNVPAEASDWTGDAQQTFNVQRGM 568

Query: 883  -------------LVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPG 929
                         L E  LD  S  Y    ++      CL+ + C DC+   S+     G
Sbjct: 569  GPIMCVQCSSTLELTETLLDDSSTAYQNPTFS-----RCLKFV-CGDCMQRMSKAGRKLG 622

Query: 930  CGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKA 989
            CG            RP       P P   + +        +TN F  +D+          
Sbjct: 623  CGH-----------RP-------PCPTASVSI--------STNIF--EDVS--------- 645

Query: 990  LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
                            ++  Q+  + I      + + +   IKSL     D  CL     
Sbjct: 646  ---------------DIVPHQIEASSITLPSKINALVAD--IKSLP---SDTKCLT---- 681

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
                    L+  +R +LMEP W+ ++EEQ ++R HR+G T+ +      +R + EEQ++E
Sbjct: 682  --------LTVASRAYLMEPHWNPTLEEQALARIHRIGQTQSVTTVRFYVRDSFEEQVME 733

Query: 1110 FLQDTDR 1116
             LQ++ +
Sbjct: 734  -LQESKK 739



 Score = 43.9 bits (102), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)

Query: 165 LKLFPHQQAAVEWMLHRE--WNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           L+ F HQ+ A+ ++L RE  W  E  +  ++  +  + G  F+VN +S        P   
Sbjct: 188 LQRFSHQKKALTFLLRRENGWAFETNQLDIWEKVDNDQG-RFFVNRISSTHQEEEPP--- 243

Query: 223 DFHGGMFCDEPGLGKTITALSL 244
            F+GG+  D  GLGKT+T ++L
Sbjct: 244 QFYGGIIADPMGLGKTLTMIAL 265


>gi|384948914|gb|AFI38062.1| helicase-like transcription factor [Macaca mulatta]
          Length = 1013

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 857  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 916

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 917  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 976

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 977  -IQNKKR 982



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|147818386|emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
          Length = 1249

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 9/186 (4%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           L +   TLIV P  L+  WK +++ H +P  + +F+     + +   +  ++DVV+TT+ 
Sbjct: 699 LNVKGGTLIVCPMALLSQWKDELETHSKPESISIFIHYGGDRTNDPKVISEHDVVLTTYG 758

Query: 670 RLSAEWGRRKKSPMM-QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
            L++ +   + S +  +V W RV+LDE HT+ SS  L+   Q A +L +  RW LTGTP 
Sbjct: 759 VLTSAYKNDENSSIFHRVEWYRVVLDEAHTIKSSKTLS--AQAAFALPSHCRWCLTGTPL 816

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
            N     L  L  +L FLH E +  N   W   I +P+E   + G  RL++ + R ++  
Sbjct: 817 QNN----LEDLYSLLCFLHVEPWC-NWAWWYKLIQKPYECGDQRGL-RLIKAILRPLMLR 870

Query: 789 RKTDLQ 794
           R  D +
Sbjct: 871 RTKDTK 876



 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 4/150 (2%)

Query: 986  SNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
            S   + +K I+FSQ+   + ++E  L   GI F      +    + + L  F      + 
Sbjct: 1094 SQSRIGEKSIVFSQWTSFLDLLEIPLRRRGIGFLRYDGKVVQKQRERILKEFSETEEKMV 1153

Query: 1046 LLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            LLM   +  +GL+L+  + VFLM+P W+ ++EEQ I R HR+G  R + V    ++ TVE
Sbjct: 1154 LLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQERTVRVRRFIVKDTVE 1213

Query: 1105 EQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            E+M    Q   R +R++   L   E   AR
Sbjct: 1214 ERM---QQVQARKQRMITGALTDEEVRTAR 1240


>gi|402861273|ref|XP_003895024.1| PREDICTED: LOW QUALITY PROTEIN: helicase-like transcription factor
           [Papio anubis]
          Length = 1007

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 851  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 910

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 911  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 970

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 971  -IQNKKR 976



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|260807957|ref|XP_002598774.1| hypothetical protein BRAFLDRAFT_212976 [Branchiostoma floridae]
 gi|229284049|gb|EEN54786.1| hypothetical protein BRAFLDRAFT_212976 [Branchiostoma floridae]
          Length = 791

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 98/184 (53%), Gaps = 11/184 (5%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           RATL+V P  ++ +W  Q+++HV P   LH++ +    +   H +    D+V+TT+  ++
Sbjct: 421 RATLVVCPLSVLSNWIDQLEEHVHPNVDLHIYTYYGPDRTKDHKVLEQQDIVLTTYQMMA 480

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            +  + K  P+ +V WLRV+LDEGHT+ +     +K   A +L A   W+LTGTP  N+ 
Sbjct: 481 MD-AKGKGGPLQKVQWLRVVLDEGHTIRNPAAQQSK--AAFALKAERTWVLTGTPIQNS- 536

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
              +  L  ++ FL  E +  +++ W   I RP     +    RL +L+    ++ R+T 
Sbjct: 537 ---MKDLWSIVCFLKLEPF-TDRQWWRRTIERPIGQGDQSALKRLQKLMGN--LAMRRTK 590

Query: 793 LQTI 796
            Q +
Sbjct: 591 TQQV 594



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 9/84 (10%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           ++  LFPHQ+ A+ WM  RE + E+   P + +    + F+   N+V+   +T    ++R
Sbjct: 193 IRTPLFPHQKQALAWMARRENSGEL---PPFWEERAANKFF---NSVTNFTSTRRPQSVR 246

Query: 223 DFHGGMFCDEPGLGKTITALSLIL 246
              GG+  D+ GLGKT+  +SLIL
Sbjct: 247 ---GGILADDMGLGKTLVVISLIL 267


>gi|403265808|ref|XP_003925105.1| PREDICTED: helicase-like transcription factor [Saimiri boliviensis
           boliviensis]
          Length = 1008

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 475 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 534

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 535 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 591

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 592 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 646



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 852  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 911

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 912  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 971

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 972  -IQNKKR 977



 Score = 49.3 bits (116), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|353235678|emb|CCA67687.1| related to RAD5-DNA helicase [Piriformospora indica DSM 11827]
          Length = 1143

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 14/184 (7%)

Query: 567 AFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVD 626
           A  L RR EK  T    P+ +  L+ D  A R  +     + +   SRATL++VP+ L+ 
Sbjct: 497 AQDLARRGEKASTESSKPQ-IKQLSID-RAFRAKVVSRQSNTQ---SRATLVIVPTSLLS 551

Query: 627 HWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKK---SPM 683
            W  ++Q+  +   L   +W    +    S   D DVVIT++  L++E  +++K   S +
Sbjct: 552 QWAGELQRASKRHTLSTLIWHGSNRAPLSSDLQDVDVVITSYGVLASEHAKQQKSVTSSL 611

Query: 684 MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPML 743
            +  W R++LDE H + S ++ T K   A +L    RW+LTGTP  N    +L  LQ +L
Sbjct: 612 FETRWFRIVLDEAHHIKSRISKTAK--AAYALDGQRRWVLTGTPIVN----RLEDLQSLL 665

Query: 744 KFLH 747
            FL 
Sbjct: 666 HFLQ 669



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH--DASCLALLMDG 1050
            + I+FSQF   + +IE  L      +  +   M    ++K+L  F    D   + ++   
Sbjct: 990  RAIVFSQFTGFLDLIEIALERDRFPWYRLDGSMDPKARVKALKQFSEPSDKPKVFIISLR 1049

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +  +GL+L+    VF+++  W+ ++E+Q I R HR+G  + + V+   +  +VE ++L+ 
Sbjct: 1050 AGGVGLNLTSANHVFMIDCWWNSAIEQQAIDRVHRLGQEKEVFVKHYIIAHSVENRILQI 1109


>gi|114589744|ref|XP_001138277.1| PREDICTED: helicase-like transcription factor isoform 1 [Pan
           troglodytes]
 gi|397512400|ref|XP_003826535.1| PREDICTED: helicase-like transcription factor [Pan paniscus]
 gi|410218966|gb|JAA06702.1| helicase-like transcription factor [Pan troglodytes]
 gi|410218968|gb|JAA06703.1| helicase-like transcription factor [Pan troglodytes]
 gi|410265812|gb|JAA20872.1| helicase-like transcription factor [Pan troglodytes]
 gi|410265814|gb|JAA20873.1| helicase-like transcription factor [Pan troglodytes]
 gi|410291834|gb|JAA24517.1| helicase-like transcription factor [Pan troglodytes]
 gi|410291836|gb|JAA24518.1| helicase-like transcription factor [Pan troglodytes]
 gi|410350717|gb|JAA41962.1| helicase-like transcription factor [Pan troglodytes]
 gi|410350721|gb|JAA41964.1| helicase-like transcription factor [Pan troglodytes]
          Length = 1009

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + ++E  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 853  KSLVVSQFTTFLSLVEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 912

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 913  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 972

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 973  -IQNKKR 978



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|21071052|ref|NP_003062.2| helicase-like transcription factor [Homo sapiens]
 gi|21071054|ref|NP_620636.1| helicase-like transcription factor [Homo sapiens]
 gi|60390864|sp|Q14527.2|HLTF_HUMAN RecName: Full=Helicase-like transcription factor; AltName:
           Full=DNA-binding protein/plasminogen activator inhibitor
           1 regulator; AltName: Full=HIP116; AltName: Full=RING
           finger protein 80; AltName: Full=SWI/SNF-related
           matrix-associated actin-dependent regulator of chromatin
           subfamily A member 3; AltName: Full=Sucrose
           nonfermenting protein 2-like 3
 gi|119599295|gb|EAW78889.1| SWI/SNF related, matrix associated, actin dependent regulator of
           chromatin, subfamily a, member 3, isoform CRA_a [Homo
           sapiens]
 gi|119599298|gb|EAW78892.1| SWI/SNF related, matrix associated, actin dependent regulator of
           chromatin, subfamily a, member 3, isoform CRA_a [Homo
           sapiens]
 gi|119599299|gb|EAW78893.1| SWI/SNF related, matrix associated, actin dependent regulator of
           chromatin, subfamily a, member 3, isoform CRA_a [Homo
           sapiens]
          Length = 1009

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 853  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 912

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 913  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 972

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 973  -IQNKKR 978



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|409045104|gb|EKM54585.1| hypothetical protein PHACADRAFT_197015 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 1202

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 32/262 (12%)

Query: 589 NLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD 648
            L   L  L L L   LD + +  SR TLIVVP  ++ +W+ QI+ HVR G L   V+  
Sbjct: 493 GLGKTLTMLALILSTKLD-IPIDYSRTTLIVVPLSVLSNWEKQIEDHVREGALSYCVYYG 551

Query: 649 HKKPSAHSLAWDYDVVITTFNRLSAEWG--------------RRKKSPMMQVHWLRVMLD 694
             +         YD+V+TT+  ++ E G              ++ +  +  V W R +LD
Sbjct: 552 TGRKMTPEELKKYDIVLTTYQTVAKEHGDLGKNGANGPSQKKQKTEKGLFDVQWKRAILD 611

Query: 695 EGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQ 753
           EGHT+    N   K+  A+ +L A  RW+LTGTP  N+P    +    +LKFL       
Sbjct: 612 EGHTI---RNSKTKMTKAVCALAAQRRWVLTGTPIINSP----ADFGSILKFLQICKPLD 664

Query: 754 NQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQT------IPLCIKEVTF-- 805
           N+  +   +LRP +     G   +  L+ +  I  R  ++Q       +PL   ++T   
Sbjct: 665 NEDFYKRMVLRPLKDGDPSGVDIMKGLMSQICIR-RTKEMQDSEGNHLVPLPPVDITVVK 723

Query: 806 LNFTEEHAGTYNELVVTVRRNI 827
           ++ T+E    Y+ + +  +  +
Sbjct: 724 VSLTDEARELYDAIDIVSKERV 745



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 8/95 (8%)

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + +LGL+L+    V+LM+P W   +E Q I R +R+G T+P+HV  L    TVE ++L+ 
Sbjct: 1083 AGALGLNLTVANNVYLMDPWWQEGIESQAIDRCNRIGQTKPVHVYQLIAEDTVESKVLDI 1142

Query: 1111 LQDTDRCRRLLKEELVKPEREGARSHRTLHDFAES 1145
             +         K++L++    G +S  T     E+
Sbjct: 1143 QEK--------KKKLIQQAFSGIKSKETQRQKKEA 1169


>gi|297672219|ref|XP_002814205.1| PREDICTED: helicase-like transcription factor [Pongo abelii]
          Length = 1009

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 853  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 912

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 913  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 972

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 973  -IQNKKR 978



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|167773597|gb|ABZ92233.1| helicase-like transcription factor [synthetic construct]
          Length = 1008

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 475 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 534

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 535 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 591

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 592 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 646



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 852  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 911

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 912  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 971

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 972  -IQNKKR 977



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|451993543|gb|EMD86016.1| hypothetical protein COCHEDRAFT_1117136 [Cochliobolus
           heterostrophus C5]
          Length = 1063

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 143/309 (46%), Gaps = 31/309 (10%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLA----WDYDVVITTF 668
           +RATL+V P   + +WK QI++H   G   L  WT +      S+      DYD+V+TT+
Sbjct: 483 TRATLLVCPLSTMTNWKEQIKEHFPEGNGSL-KWTRYHGAERFSMTPEKLADYDIVLTTY 541

Query: 669 NRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           + ++ +   +K++ +  ++W R++LDE HT+    N TN+ + A ++    RW +TGTP 
Sbjct: 542 HIIAKDIMDKKRA-LPYLNWFRIVLDEAHTI---RNPTNQSKAACNMMGQRRWAVTGTPV 597

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
            N    +L  L  +  F+    +      ++  IL PF++  +    + LQLL   +   
Sbjct: 598 QN----RLEDLGALFNFIKLRPF-DTTAGFNTHILNPFKS-ADPNVVKRLQLLVSTVTIR 651

Query: 789 RKTDL--QTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQ 846
           R  ++  + +P  +  V  L F+ E    ++      +R +L     D       +  K 
Sbjct: 652 RTKEIIKEEVPRKLDYVVRLQFSREEKQLHDWFEKDTQRKVLAVTQGDK------MGGKS 705

Query: 847 WKFRSTTIRNLRLSCCVAGH------IKVTDAGEDIQETMDVLVENGLDP-LSQEYAFIK 899
           +    T I NLRL C           +K TD G   ++ M++  +    P L+++ A+  
Sbjct: 706 YARILTAILNLRLICAHGRDLLSEEALKTTD-GMTYEQPMEIEDDGQETPQLTRQQAYEM 764

Query: 900 YNLLNGGNC 908
            NLL   N 
Sbjct: 765 LNLLESTNA 773



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K I+FS +  H+ +IE  L  AG     +   M    + KS+ + R       +L+  
Sbjct: 908  PIKSIVFSSWTTHLDLIEIALKTAGHALVRLDGRMTRDARDKSMHLLRTSPDIRIMLVSI 967

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            G+  LGL+L+   +VF+MEP ++ + E Q + R HR+G  R + ++   M+ + EE+ML 
Sbjct: 968  GAGGLGLNLTTANKVFMMEPQFNPAAEAQAVDRVHRLGQDREVTIKRFIMQDSFEEKML- 1026

Query: 1110 FLQDTDRC--------RRLLKEELVKPEREGARS 1135
             LQ+  +          R  KEE  K   E  RS
Sbjct: 1027 VLQEKKKALADLTMARERKSKEEATKARLEELRS 1060



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 10/91 (10%)

Query: 161 PCMKLKLFPHQQAAVEWMLHREWNA-----EVLRHPLYIDLATEDGFYFYVNTVSGD-IA 214
           P +K +L+PHQ+ A+ +M+  E +      +  R P++     ++G   YV+ ++G+  A
Sbjct: 365 PLIKTELYPHQKQALYFMVDHEKDRSSEEFDQRRDPMWTTKTRDNGRISYVHIITGEERA 424

Query: 215 TGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
              AP++    GG+  DE GLGKT++ LSLI
Sbjct: 425 QKPAPSL----GGILADEMGLGKTLSILSLI 451


>gi|170085493|ref|XP_001873970.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82]
 gi|164651522|gb|EDR15762.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82]
          Length = 1313

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 70/118 (59%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  IE  L VAGI++  +   M   ++ K++D  + D  C  LL+   +
Sbjct: 1148 KTVVFSQWTTMLDKIEDALEVAGIRYDRLDGTMKRDDRTKAMDALKTDPGCEVLLVSLKA 1207

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RV+LM+P W+ ++E Q + R HR+G TRP+    L +  ++E ++LE
Sbjct: 1208 GGVGLNLTAAQRVYLMDPYWNPAVENQAVDRIHRLGQTRPVTTVKLIIENSIEARLLE 1265



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/359 (21%), Positives = 128/359 (35%), Gaps = 132/359 (36%)

Query: 585 KTLDNLAFDLAALRLALCEPLDSVRLYL-SRATLIVVPSYLVDHWKTQIQQH-------- 635
           K+LD L  D A           S R+   SRATLI+ P   V +W+ Q ++H        
Sbjct: 558 KSLDKLEADYAR----------SCRIKAKSRATLIICPLSTVSNWEDQFREHWKGDVVVF 607

Query: 636 --------------------------------VRPGQ----LHLFVWTDHKKPSAHSLAW 659
                                           V P Q    L ++++  + +    +   
Sbjct: 608 GGSGGTCIPSNSAPPCSQPSLFSNSMLIDTKPVAPSQTGNPLRIYIYHGNARRPDPAFLG 667

Query: 660 DYDVVITTFNRLSAEWGR------------------------------------------ 677
           D+D VITT+  L++E+ +                                          
Sbjct: 668 DFDAVITTYATLASEFSKQNRSTATADDDEDDAGSSDGVGGVDIDEYGNQVLRLPKSKKT 727

Query: 678 ---RKKS-----------PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
              RKKS            +  +HW RV+LDE H++  +  + ++   +  L A  R  L
Sbjct: 728 GMKRKKSNIFTSGAEVTSALQSIHWFRVVLDEAHSIKETGTVGSR--ASCDLVADRRLCL 785

Query: 724 TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
           TGTP  N    +L  +  ++KFL  E +  ++  W   I  P +     G +R LQ + +
Sbjct: 786 TGTPVQN----KLDDVFALIKFLRLEPF-DDKNTWTEYIGSPVKFGQALGVAR-LQTIMK 839

Query: 784 CMISARKTDLQT--------IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWND 834
           C+   R  + +T        +P    E+ +L F  +    Y++       N   A++ND
Sbjct: 840 CITLRRTKETETQDGKKILALPPRRDELRYLKFDPQEQEIYDQFF-----NESKAEFND 893


>gi|62087684|dbj|BAD92289.1| SWI/SNF-related matrix-associated actin-dependent regulator of
           chromatin a3 variant [Homo sapiens]
          Length = 992

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 853  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 912

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 913  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 972

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 973  -IQNKKR 978



 Score = 49.3 bits (116), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|575251|emb|CAA86571.1| helicase-like transcription factor [Homo sapiens]
          Length = 1009

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 853  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 912

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 913  RAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 972

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 973  -IQNKKR 978



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|27882409|gb|AAH44659.1| Helicase-like transcription factor [Homo sapiens]
 gi|119599297|gb|EAW78891.1| SWI/SNF related, matrix associated, actin dependent regulator of
           chromatin, subfamily a, member 3, isoform CRA_c [Homo
           sapiens]
          Length = 1008

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 475 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 534

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 535 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 591

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 592 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 646



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 852  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 911

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 912  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 971

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 972  -IQNKKR 977



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|426342481|ref|XP_004037872.1| PREDICTED: helicase-like transcription factor [Gorilla gorilla
           gorilla]
          Length = 1009

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 853  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 912

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 913  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 972

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 973  -IQNKKR 978



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|531196|gb|AAA67436.1| ATPase [Homo sapiens]
          Length = 1009

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 853  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 912

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 913  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 972

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 973  -IQNKKR 978



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|158255898|dbj|BAF83920.1| unnamed protein product [Homo sapiens]
          Length = 1009

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 853  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 912

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 913  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 972

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 973  -IQNKKR 978



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|16943790|emb|CAD10805.1| SWI/SNF related, matrix associated, actin dependent regulator of
           chromatin, subfamily a, member 3 [Homo sapiens]
          Length = 1009

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 853  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 912

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 913  RAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 972

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 973  -IQNKKR 978



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|410291838|gb|JAA24519.1| helicase-like transcription factor [Pan troglodytes]
 gi|410350719|gb|JAA41963.1| helicase-like transcription factor [Pan troglodytes]
          Length = 1013

 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + ++E  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 857  KSLVVSQFTTFLSLVEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 916

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 917  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 976

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 977  -IQNKKR 982



 Score = 49.3 bits (116), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|328875307|gb|EGG23672.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
          Length = 1175

 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 22/263 (8%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           L LS  TLI+VP +++  W  +   H    +L   + ++   PS   L   YD+VI + N
Sbjct: 553 LVLSSTTLIIVPHHILHQWNQETMMHRIIKKL--VIDSEDHIPSIEELVG-YDLVIMSHN 609

Query: 670 RLSA-----EWGRRKKSPMMQVHWLRVMLDEGHTLG-SSLNLTNKLQMAISLTASNRWLL 723
           ++S           +   ++ ++WLRV++DEGH +G SS  +TN   +   L A  RW+ 
Sbjct: 610 KVSRLDTNDNSIDSQAQSLLGIYWLRVIIDEGHVIGNSSTKMTN---LVKDLAAERRWVC 666

Query: 724 TGTPTPNT-PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           +GTP  ++  +++LS+L  +L FL    Y ++   +   I  P       G  RL+Q+L 
Sbjct: 667 SGTPVSSSLVSNELSNLYSILSFLRVNPY-KDADTFRKLISTPTTKLDPRGIDRLVQVLS 725

Query: 783 RCMI----SARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHV 838
           R  I    +    DLQ +P    +   ++ +++    YNE+V  V  N+L + +  P   
Sbjct: 726 RISIRTPSAVVARDLQ-LPTLTVDTHMVSLSKDEIIKYNEIVFQVATNLLASQYEGP--- 781

Query: 839 ESLLNPKQWKFRSTTIRNLRLSC 861
           +SL +    K+       LR +C
Sbjct: 782 DSLFSAGNQKYAIEVFNQLRRAC 804



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 32/156 (20%)

Query: 1009 QQLTVAGIKFAGM------YSPMHSSNKIKSLDM----FRHDASCLALLMDGS-ASLGLD 1057
            Q+L   GIK   M      +   HS+ K+K   M    F+ D+    ++M+   A+ G++
Sbjct: 974  QELEKKGIKLMAMKHAKLNFLQYHSNMKLKKRAMAILSFQTDSQQHFIVMNTDLAAYGIN 1033

Query: 1058 LSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE-------- 1109
            L+    +  ++ +     E Q I RAHR+G   P+ VE L +  T+E+ +L         
Sbjct: 1034 LTAANHIIFVDQLTSEGKERQAIKRAHRIGQLNPVSVEKLIIPNTIEQMILSTLNHNQNQ 1093

Query: 1110 -------------FLQDTDRCRRLLKEELVKPEREG 1132
                          L++ D     + +E+V+ E EG
Sbjct: 1094 NNQNNQNNNNQIINLEEEDEQMEFINQEIVQQEEEG 1129



 Score = 47.8 bits (112), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 32/155 (20%)

Query: 164 KLKLFPHQQAAVEWMLHREWN-AEVLRHPLYI---------------------DLATEDG 201
           ++KL+ +QQ  +  M+ RE +  E   +P++I                     D AT   
Sbjct: 333 RMKLYNYQQNGLAKMIRREASLGEPYINPIWIKLPIDQENNEEEEEEEEMEIEDTATTAA 392

Query: 202 FYFYVNTVSGDIATGTAPT---MRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDG 258
             F    +         P    + D  GG+ C+E G GKT+ +++LIL T G+ A  PD 
Sbjct: 393 IEFVYKNLITKKTVKKEPKDYYLADIKGGILCEEMGTGKTVISIALILSTLGSFAKVPDN 452

Query: 259 VKIIW-------CTHNGDPRCGYYDLSGDKLTCNN 286
               W            D +    DL  +++  NN
Sbjct: 453 PPPNWEIILPPMSLETKDKKKQIIDLDYEQMEENN 487


>gi|332214344|ref|XP_003256297.1| PREDICTED: helicase-like transcription factor isoform 1 [Nomascus
           leucogenys]
 gi|441632616|ref|XP_004089700.1| PREDICTED: helicase-like transcription factor isoform 2 [Nomascus
           leucogenys]
          Length = 1009

 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 592

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 593 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 647



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 853  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 912

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 913  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 972

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 973  -IQNKKR 978



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + A    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFAEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|326479756|gb|EGE03766.1| SNF2 family helicase [Trichophyton equinum CBS 127.97]
          Length = 1050

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 32/247 (12%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           +S++TL+V P  L+  W+++I+  + R  +L + V+    +         +DVVITT+  
Sbjct: 342 VSKSTLVVAPLALIKQWESEIESKIERSHRLSVCVYHGTGRTKHRDDLDSFDVVITTYGT 401

Query: 671 LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTP 729
           LS+E G  K      VHW R++LDE HT+    N   K   A+ +L +  RW LTGTP  
Sbjct: 402 LSSEHG--KSDGCFGVHWYRIVLDEAHTIK---NRNAKATQAVYALNSQYRWCLTGTPLQ 456

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRCM 785
           N     L  LQ +++FL  + Y +   AW   I RP    M  GR     R LQ+  +  
Sbjct: 457 NN----LDELQSLIRFLRIKPYDE-LAAWREQITRP----MSNGRGGLALRRLQVYLKAF 507

Query: 786 ISARKTD---LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
           +  R  D   L + P    +      T +     +E    V+R+I+         +E+  
Sbjct: 508 MKRRTKDVLKLDSKP-DTGDTNSEELTNDQKQGPSEGFKIVKRDIV--------KIEAEF 558

Query: 843 NPKQWKF 849
           +P++W F
Sbjct: 559 SPEEWAF 565



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 7/151 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L   GI +A     M +  +  SL+  R+ +    LL    +
Sbjct: 827  KFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASLNRLRNSSGTRVLLCSLRA 886

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L ++GTVEE++LE  
Sbjct: 887  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTIDVKVYKLTIKGTVEERILEL- 945

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
               +R R L K  +   E + A    T+ D 
Sbjct: 946  --QERKRELAKSAI---EGKSAAGKLTMKDM 971


>gi|212542133|ref|XP_002151221.1| SNF2 family helicase, putative [Talaromyces marneffei ATCC 18224]
 gi|210066128|gb|EEA20221.1| SNF2 family helicase, putative [Talaromyces marneffei ATCC 18224]
          Length = 1209

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 1/123 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +       I + L + GI F    + + +S K   L +F   +S   LLMD  
Sbjct: 916  EKIIIFYENNNTAFWIAEGLELLGIDFRIYANTLKTSQKAAYLSLFEESSSVRILLMDLR 975

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             AS GL ++  +RVF++ PIW   +E Q I RAHR+G TRP+ VETL ++ T+EE+ML  
Sbjct: 976  QASHGLHIASASRVFIVNPIWRPYVESQAIKRAHRIGQTRPVFVETLVLKDTLEEKMLHR 1035

Query: 1111 LQD 1113
             Q+
Sbjct: 1036 RQE 1038



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 12/142 (8%)

Query: 607 SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVIT 666
           +VR+ L   TLI+VP  LVDHW+++I  H     + +    + K PS   L   YD+++ 
Sbjct: 404 AVRIRLISGTLIIVPPNLVDHWQSEIAIHTEGLNVLVLRSRNDKTPSEEEL-LKYDIILF 462

Query: 667 TFNRLSAEWGRRK-----------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISL 715
              R   E G  +           +SP+ + HWLR+++DEGH +      ++ + M   L
Sbjct: 463 ARTRFEKETGEPETSRHAPSISAAESPLKKFHWLRIIVDEGHNVAGHGYKSSTMHMLDQL 522

Query: 716 TASNRWLLTGTPTPNTPNSQLS 737
               RW+++GTP+     ++LS
Sbjct: 523 HVERRWVVSGTPSNGLYGAELS 544


>gi|326471073|gb|EGD95082.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818]
          Length = 1050

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 32/247 (12%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           +S++TL+V P  L+  W+++I+  + R  +L + V+    +         +DVVITT+  
Sbjct: 342 VSKSTLVVAPLALIKQWESEIESKIERSHRLSVCVYHGTGRTKHRDDLDSFDVVITTYGT 401

Query: 671 LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTP 729
           LS+E G  K      VHW R++LDE HT+    N   K   A+ +L +  RW LTGTP  
Sbjct: 402 LSSEHG--KSDGCFGVHWYRIVLDEAHTIK---NRNAKATQAVYALNSQYRWCLTGTPLQ 456

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRCM 785
           N     L  LQ +++FL  + Y +   AW   I RP    M  GR     R LQ+  +  
Sbjct: 457 NN----LDELQSLIRFLRIKPYDE-LAAWREQITRP----MSNGRGGLALRRLQVYLKAF 507

Query: 786 ISARKTD---LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
           +  R  D   L + P    +      T +     +E    V+R+I+         +E+  
Sbjct: 508 MKRRTKDVLKLDSKP-DTGDTNSEELTNDQKQGPSEGFKIVKRDIV--------KIEAEF 558

Query: 843 NPKQWKF 849
           +P++W F
Sbjct: 559 SPEEWAF 565



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 7/151 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L   GI +A     M +  +  SL+  R+ +    LL    +
Sbjct: 827  KFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASLNRLRNSSGTRVLLCSLRA 886

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L ++GTVEE++LE  
Sbjct: 887  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTIDVKVYKLTIKGTVEERILEL- 945

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
               +R R L K  +   E + A    T+ D 
Sbjct: 946  --QERKRELAKSTI---EGKSAAGKLTMKDM 971


>gi|224139690|ref|XP_002323229.1| chromatin remodeling complex subunit [Populus trichocarpa]
 gi|222867859|gb|EEF04990.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 743

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 15/211 (7%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           +++ TLIV PS +   W++Q+Q+H   G L L+ +  + +         YD+V+TT+  L
Sbjct: 225 VTKQTLIVCPSVVCSTWESQLQEHTHKGSLKLYKYYGNSRTKDVEELKKYDIVLTTYRTL 284

Query: 672 SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS-LTASNRWLLTGTPTPN 730
           +AE  R  + P+M++ W RV+LDE H +    N   +   A++  TA  RW +TGT   N
Sbjct: 285 TAECFRCMRCPLMKIEWWRVILDEAHVIK---NANARQSRAVTKFTARRRWAVTGTHIQN 341

Query: 731 TPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK 790
                L  L  ++ FL  +     ++ W G + RP    + +G   LLQ+L   +   R 
Sbjct: 342 G----LFDLFSLMAFLQLDPLSI-KRYWQGLLQRP----LADGDENLLQVLMATISLRRI 392

Query: 791 TD--LQTIPLCIKEVTFLNFTEEHAGTYNEL 819
            D  L  +P    E   L  + E    Y+ +
Sbjct: 393 KDKLLIGLPSKTVETVSLKLSGEERELYDRM 423



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 11/93 (11%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           +K KL  HQ+  + W++ +E + E+   P +     +DG Y  + T+     T   P   
Sbjct: 127 IKAKLLDHQKEGLWWLVSKEKSDEL--PPFW---EVKDGLYLNLLTMH---QTDRRP--E 176

Query: 223 DFHGGMFCDEPGLGKTITALSLI-LKTQGTLAD 254
            FHGG+F D+ GLGKT+T LSLI     GTL +
Sbjct: 177 PFHGGIFADDHGLGKTLTFLSLISFDKVGTLPE 209



 Score = 47.0 bits (110), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 50/92 (54%), Gaps = 5/92 (5%)

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            ++  G++L+  ++V+L+EP W+ + EE+ I+  HR G    + +  L  + ++EE++LE 
Sbjct: 653  TSVFGINLTAASKVYLLEPWWNSADEERAINCVHRYGQKENVRIVRLIAQNSIEERILEM 712

Query: 1111 LQDTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
             +     R+ L  E  + + +  R   ++ D 
Sbjct: 713  QE-----RKKLASEAFRRQGQKERREVSIDDL 739


>gi|1658307|emb|CAA86572.1| helicase-like transcription factor [Homo sapiens]
          Length = 887

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 354 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 413

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 414 HDYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 470

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 471 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 525



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 731  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 790

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 791  RAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 850

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 851  -IQNKKR 856



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 118 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 167

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 168 GILADDMGLGKTLTAIAVIL 187


>gi|402220070|gb|EJU00143.1| hypothetical protein DACRYDRAFT_17168 [Dacryopinax sp. DJM-731 SS1]
          Length = 1180

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQ+   +  +E  L + GI+F  +   M    + +++D  + D +C  LL+   +
Sbjct: 1027 KTIVFSQWTSMLDKVEDALEMHGIRFDRLDGTMRRDERTRAMDALKSDPACEVLLVSLRA 1086

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RV+LM+P W+ ++E Q + R HR+G TRP+    L +  TVE +MLE
Sbjct: 1087 GGVGLNLTAAQRVYLMDPYWNPAVENQAVDRIHRLGQTRPVTTIKLVIENTVEARMLE 1144



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 18/148 (12%)

Query: 681 SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
           SP+ QV W RV+LDE H++  +  + ++   +  L A  R  LTGTP  N    +L  + 
Sbjct: 620 SPLQQVDWFRVVLDEAHSIKETSTVASR--ASCDLVAERRICLTGTPVQN----KLDDVY 673

Query: 741 PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT------DLQ 794
            ++KF+  + +  ++  W   I  P +     G +RL  ++   +I+ R+T      D Q
Sbjct: 674 ALVKFIRVQPF-DDKNFWTEWIGGPCKFGQPIGVARLQTIMK--VITLRRTKETKSSDGQ 730

Query: 795 TI---PLCIKEVTFLNFTEEHAGTYNEL 819
           +I   P    E+  L   E   G Y+ +
Sbjct: 731 SILALPPRKDELRMLQLDEYEKGIYDRV 758


>gi|225444469|ref|XP_002267771.1| PREDICTED: DNA repair protein RAD16-like [Vitis vinifera]
          Length = 792

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 188/476 (39%), Gaps = 100/476 (21%)

Query: 686  VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKF 745
            V W R++LDE H + S  N T K  +A  L +  +W LTGTP  N+    +  +  +++F
Sbjct: 335  VRWERIILDEAHAIKSRNNSTTKAILA--LKSKYKWALTGTPLQNS----MEEIYSLIRF 388

Query: 746  LHEEAY-------------------------GQNQKAWDGGILRPFEAEMEEG--RSRLL 778
            L    Y                         G++   W+  + RP + E  +   R+R+L
Sbjct: 389  LQVYPYAYFFCWWCDCKSLDYVHSASCPCIHGRHFCWWNKYVSRPLQMENHQNSRRARIL 448

Query: 779  ---QLLHRCMISARKTDLQT-IPLCIKEVTF----LNFTEE--HAGTYNELVVTVRRNI- 827
               ++L   M+   K  +   + L +K VT     L+ TEE  +   Y E  +   R + 
Sbjct: 449  LTQKVLKSIMLRRTKKSIAVDLGLPLKTVTLRRDALDITEEDYYQTLYKECQLEFNRYVE 508

Query: 828  ---LMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLV 884
               LM   N   H+  L+         T +R       +  H K  +A  DI +     V
Sbjct: 509  DGTLM---NYYVHILELI---------TRLRQALDHPYLVVHSKSGEALCDICK----WV 552

Query: 885  ENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPG-----CGFLYE---- 935
               L   S  + F K  L +    L   LC          CSLP      CG L+     
Sbjct: 553  AKDLVVTSCGHTFCKACLEDFTKILGKSLC--------PTCSLPFTPRKICGGLFAEAMG 604

Query: 936  MQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVI 995
             ++  IL R    N  +P    +  L+   R             +   ++ +     K I
Sbjct: 605  FKTSSILGRISLGN--FPTSTKIEALKEEIR-------------FMVEMDGSA----KGI 645

Query: 996  IFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASL 1054
            +FSQF   + +I   L  +GI    +   M ++ K  ++  F  D  C   L    S   
Sbjct: 646  VFSQFTSFLDLISYSLHQSGINCVQLVGKMTATAKDAAVKRFNEDPDCKIFLTSLKSGGA 705

Query: 1055 GLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             L+L   + VFLMEP W+  +E+Q   R HR+G  +P+ V    +  T+EE++LE 
Sbjct: 706  ALNLPVASYVFLMEPWWNPFVEQQAYDRIHRIGQYKPVRVIKFIIENTIEERILEL 761


>gi|384500395|gb|EIE90886.1| hypothetical protein RO3G_15597 [Rhizopus delemar RA 99-880]
          Length = 710

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 125/283 (44%), Gaps = 48/283 (16%)

Query: 619 VVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--PSAHSLAWDYDVVITTFNRLSAE-- 674
           +VP  LV  W  +I +HVR G L+  V  + K+  PS   L   YD+VI + +R + E  
Sbjct: 222 IVPDNLVAQWTGEIYKHVRDGYLNFTVHDNIKQSIPSPLDLI-QYDLVIASQSRFAYENQ 280

Query: 675 ----------------------------WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLT 706
                                       +     SP++QVHW RV++DEGH L       
Sbjct: 281 QGGLDFTSNICQCPTIGSTRERACVCFVYKDPYVSPLLQVHWRRVIVDEGHRLSQK---- 336

Query: 707 NKL-QMAISLTASNRWLLTGTPTPNT----PNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
           NKL +++  L   +RW+ TGTPT +      +  L  L  +   L  + +  N++ W   
Sbjct: 337 NKLSELSSKLFCHSRWICTGTPTQHLMGLYESDDLDRLGKLCIALGIQPFRSNRRLWHKW 396

Query: 762 ILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ---TIPLCIKEVTFLNFTEEHAGTYNE 818
           I++PF        S+  Q+L R MI  +K D++   ++P   ++V +L F       +N 
Sbjct: 397 IVKPFLDRKPWALSQCGQMLSRIMIRHQKRDIEKEVSLPPLSQKVVYLEFDVYQWLAHNC 456

Query: 819 LVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSC 861
            V  +  N +++    P +   L + K  K    T+ NL  SC
Sbjct: 457 QVAMISLNAILSQREGPDY---LFSSKNVKSLRETVHNLWQSC 496



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 2/90 (2%)

Query: 160 MPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAP 219
           +P MK  L+ +Q+ ++  +L RE   + +  P  I   + D  Y Y+N ++G I+     
Sbjct: 47  IPGMKTTLYLYQKNSLLKILSRELEPKEIEKPEMIQFKSIDSEY-YLNRLTGYISDQPEY 105

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLILKTQ 249
           T +D  GG+ C++ G GKT   L+ ++ T+
Sbjct: 106 T-QDIKGGIICEDMGTGKTCLCLAAVMTTK 134


>gi|296808231|ref|XP_002844454.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
 gi|238843937|gb|EEQ33599.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
          Length = 1172

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 1/119 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +       I + L + G  F    S +  S K + L +F    S   LLMD  
Sbjct: 890  EKIIIFYESENTAFWIAEGLELLGTDFRIYASTLKPSQKSEYLSVFNEGESVRVLLMDLR 949

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             A+ GL ++  +RV+++ PIWD ++E Q I RAHR+  +RP++VETL ++GT+EE+ML+
Sbjct: 950  QAAHGLHIAAASRVYIVNPIWDPNIESQAIKRAHRISQSRPVYVETLVLKGTLEEKMLK 1008



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/367 (21%), Positives = 150/367 (40%), Gaps = 64/367 (17%)

Query: 607 SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVIT 666
           S+ ++++ A+L+VVP  LVDHW  +I +H    ++ +    + K P A  L   YD+V+ 
Sbjct: 386 SITVHITSASLVVVPPNLVDHWLAEIAKHTEGLKVLVLRDINDKTPPAAEL-LKYDIVLF 444

Query: 667 TFNRLSAEWGR-------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
           +  R   E G           SP+  +HWLR+++DEGH    +   ++ + M   L    
Sbjct: 445 SQARFKKESGGFSAAAPVTYSSPLRALHWLRIIVDEGHNFAGTGGKSSSVYMLDKLQVER 504

Query: 720 RWLLTGTPTP-----------------------------------NTPNSQLSHLQPM-- 742
           RW+++GTP+                                    N  + +L  ++ +  
Sbjct: 505 RWVVSGTPSKGLYGIEISLAAEGSFDSASDEAKASDILNDRKNPQNVLHEELKRVENLRS 564

Query: 743 --LKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL-----QLLHRCMISARKTDLQ- 794
             + FL+ + +  N +A D      +   +  G  R++       L   ++  R  DL  
Sbjct: 565 MVVDFLNLKPWA-NSRAADPANWTKYMTPIGPGGKRIMSSSLRSTLQSLVVRHRSEDLHR 623

Query: 795 --TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRST 852
              +P    EV +L  T     + N  ++ +  N + ++ +D  +   L +PK  K  S 
Sbjct: 624 ELPLPKLHNEVVYLEPTFYDRASLNLFILRIVVNTITSERSDEDY---LFHPKNRKHLSQ 680

Query: 853 TIRNLRLSCCVAGHIKV-TDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCL-- 909
            + NLRL+      ++  T  G  ++     L +N      +E   ++  ++ G   L  
Sbjct: 681 LMNNLRLAGFWWPAMETETIQGTTLKVARQYLEKNMFRMADKELVLLRQAIITGETILSC 740

Query: 910 --RHILC 914
             R+ LC
Sbjct: 741 SPRNALC 747


>gi|168703233|ref|ZP_02735510.1| SNF2-related protein [Gemmata obscuriglobus UQM 2246]
          Length = 1098

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 3/138 (2%)

Query: 976  KQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLD 1035
            K D   P L+       K ++FSQF   + ++ ++LT  GI+F   Y    + ++ K ++
Sbjct: 933  KLDYLLPQLQELAESGQKALVFSQFTSLLDIVRKRLTAEGIQFE--YLDGRTRDRDKRVE 990

Query: 1036 MFRHDASC-LALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
             F+ D +C L L+   +  +GL+L+    VFL++P W+ + E Q I R++R+G T+P+  
Sbjct: 991  RFQTDPACKLFLVSLKAGGVGLNLTAAEYVFLLDPWWNPAAEAQAIDRSYRIGQTKPVFA 1050

Query: 1095 ETLAMRGTVEEQMLEFLQ 1112
              L  RGTVEE++LE  Q
Sbjct: 1051 YRLIARGTVEEKVLELQQ 1068



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 114/275 (41%), Gaps = 30/275 (10%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S   L+VVP  LV +WK +  +     +L +   T   +    +   D+D+V+TT+  L 
Sbjct: 691 SGPALVVVPRSLVFNWKREAARFA--PKLKVLDHTGTARDRTCANFKDFDLVLTTYGTL- 747

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
               R   +   +V +   +LDE     ++   T K    I   A +R  L+GTP  N  
Sbjct: 748 ----RNDAAAFAEVRFDTCVLDESQAAKNAATETAKAVRVIQ--ADHRLALSGTPVEN-- 799

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ--LLHRCMISARK 790
              L  L  +  FL+    G+   A  G I  P +AE  E  +R L+  +L R      K
Sbjct: 800 --HLGELWTLFDFLNPGMLGRAALAGAGSIRNP-DAETREFLARALRPYILRRTKAQVAK 856

Query: 791 TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESL-LNPKQWKF 849
                +P   ++  + +        Y+EL    R ++L       +HV+S+ L   Q + 
Sbjct: 857 ----DLPQKTEQTVYCDLEPSQRQVYDELRDHYRASLL-------AHVDSVGLKRSQIQV 905

Query: 850 RSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLV 884
            +  +R LR + C  G I     G D    +D L+
Sbjct: 906 LAALMR-LRQAACHPGLIDKKRTG-DASAKLDYLL 938


>gi|297806511|ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316976|gb|EFH47398.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 18/223 (8%)

Query: 603 EPLDSVRLYLS-RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDY 661
           +P D V + +S + TLIV P  ++  W TQ+++H   G L ++++   ++    +    Y
Sbjct: 326 KPDDVVGMNVSQKTTLIVCPPSVISAWITQLEEHTVQGSLKVYMYHGGERTDDVNELMKY 385

Query: 662 DVVITTFNRLSAE--WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
           D+V+TT++ L+ E  W   + SP+ ++ WLR++LDE HT+ ++     + ++   L AS 
Sbjct: 386 DLVLTTYSTLAVEESW---EDSPVKKMEWLRIILDEAHTIKNA--NAQQSRVVSKLKASR 440

Query: 720 RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ 779
           RW +TGTP  N        L  ++ FL  E +   +  W   I RP     ++G SRL  
Sbjct: 441 RWAVTGTPIQNGS----FDLYSLMAFLRFEPFSI-KSYWQSLIQRPLGQGNKKGLSRLQV 495

Query: 780 LLHRCMISARKT---DLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
           L+    IS R+T    L  +P    E  ++  + E    Y+ +
Sbjct: 496 LM--ATISLRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHM 536



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 4/143 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHD--ASCLALLMDG 1050
            K ++FSQF + + ++E  L  AG     +   M    + + +  F +      + LL   
Sbjct: 707  KSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTLKKRTQVIGEFGNPELTGPVVLLASL 766

Query: 1051 SAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             AS  G++L+  +RV+L++P W+ ++EEQ + R HR+G  + + +  +  R ++EE++LE
Sbjct: 767  KASGAGINLTAASRVYLLDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARDSIEERVLE 826

Query: 1110 FLQ-DTDRCRRLLKEELVKPERE 1131
              Q   +      K    K ERE
Sbjct: 827  LQQKKKNLANEAFKRRQKKDERE 849



 Score = 47.0 bits (110), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 10/84 (11%)

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTM 221
            +K +LF HQ+  + W+L+RE + E+   P + +   +DG +   NT++   +      +
Sbjct: 206 VIKSELFAHQKEGLGWLLYREKSGEL--PPFWEE---KDGEFL--NTLTNYRSDKRPEPL 258

Query: 222 RDFHGGMFCDEPGLGKTITALSLI 245
           R   GG+F D+ GLGKT+T LSLI
Sbjct: 259 R---GGVFADDMGLGKTLTLLSLI 279


>gi|395334517|gb|EJF66893.1| hypothetical protein DICSQDRAFT_131167 [Dichomitus squalens LYAD-421
            SS1]
          Length = 1346

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 70/118 (59%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  +E  L +A I++  +   M    + ++++  +HD SC  LL+   +
Sbjct: 1193 KTVVFSQWTSMLDKVEDALEIANIRYDRLDGTMKRDERTRAMEALKHDPSCEVLLVSLKA 1252

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RV+LM+P W+ ++E Q + R HR+G TRP+    L +  T+E ++LE
Sbjct: 1253 GGVGLNLTAAQRVYLMDPYWNPAVENQAVDRIHRLGQTRPVTTVKLIIENTIEARLLE 1310



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/344 (21%), Positives = 125/344 (36%), Gaps = 130/344 (37%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVR----------------------------PGQLHLF 644
           SRATLI+ P   V +W+ Q ++H R                            P  L L 
Sbjct: 610 SRATLIICPLSTVVNWEDQFKEHWRGEVIVCGGQSGVPPTASQPSTSGFSTPTPTGLQLD 669

Query: 645 VWTDHKKPSAHSLA----------------------WDYDVVITTFNRLSAEWGRRKKS- 681
           +  + KKP+   L                        D+D VITT++ L++E+ ++ +S 
Sbjct: 670 IKAEMKKPTVGRLRDGPPLRVYVYHGNARRLEPTFLADFDAVITTYSTLASEFSKQTRSV 729

Query: 682 ----------------------------------------------------PMMQVHWL 689
                                                               P+  +HW 
Sbjct: 730 EAADDDEEDDADGVGSEGFIEVDGSGQPITKSKGKKPKKRKKACGSAIEATSPLQSIHWF 789

Query: 690 RVMLDEGHTLGSSLNLTNKL--QMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
           RV+LDE H    S+  TN +  + +  L A  R  LTGTP  N    +L  +  ++KFL 
Sbjct: 790 RVVLDEAH----SIKETNTVGCRASCDLVADRRLCLTGTPVQN----KLDDVYALIKFLR 841

Query: 748 EEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD---------LQTIPL 798
              +  ++  W+  I  P +     G +R LQ + +C I+ R+T          + ++P 
Sbjct: 842 LAPF-DDKNTWNEFIGTPVKYAQPLGVAR-LQTIMKC-ITLRRTKESRAEDGKRILSLPP 898

Query: 799 CIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
              E+  L F ++    Y++       N   A++++ SH   ++
Sbjct: 899 RTDELRLLKFDQQEQAIYDQFF-----NESKAEFHELSHKNEVM 937


>gi|170085783|ref|XP_001874115.1| RAD5-like protein [Laccaria bicolor S238N-H82]
 gi|164651667|gb|EDR15907.1| RAD5-like protein [Laccaria bicolor S238N-H82]
          Length = 1156

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 110/228 (48%), Gaps = 23/228 (10%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD-------YDVVITT 667
           ATLI+ P+ L+  W  ++Q+  +PG + + VW    +    ++            VVIT+
Sbjct: 553 ATLIIAPTSLLSQWSEELQRSSKPGTVDVLVWHGQNRLDIEAMIESDGEDDKTIKVVITS 612

Query: 668 FNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
           +  L++E  +  KSP+ +++WLR++LDE H   S  + T K   A  L    RW +TGTP
Sbjct: 613 YGVLASEHAKSAKSPIFEINWLRIVLDEAHACKSRTSKTAKAVYA--LAGRRRWAVTGTP 670

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
             N    +L  L  +LKFL  + + +    +   I  PF A  +     ++Q++   ++ 
Sbjct: 671 IVN----RLEDLYSLLKFLGFKPWSEFS-YFRSFITLPFLAR-DPKAIEIVQVILESILL 724

Query: 788 ARKTDL------QTIPLCIKEVTF--LNFTEEHAGTYNELVVTVRRNI 827
            R+ ++      + + L  KE+T   L FT      Y+ +  T +RN 
Sbjct: 725 RREKNMTDSEGKKIVELPPKEITVETLEFTALERKIYDSIYHTAKRNF 772



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 4/121 (3%)

Query: 993  KVIIFSQF---LEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            + ++FSQF   L+ I V  ++      +F G       S  I     F      L + + 
Sbjct: 1005 RAVVFSQFTSFLDLIQVALERERFDQYRFDGTMDVKKKSAAINEFKSFSRKGKVLVVSLK 1064

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+L+    VF+M+  W+ + E Q I R HR+G  + ++V    +  T+E ++L+
Sbjct: 1065 -AGGVGLNLTAANHVFMMDCWWNAATENQAIDRVHRIGQEKTVYVTHFIVANTIESRILQ 1123

Query: 1110 F 1110
             
Sbjct: 1124 I 1124


>gi|440637603|gb|ELR07522.1| hypothetical protein GMDG_02613 [Geomyces destructans 20631-21]
          Length = 1093

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 140/319 (43%), Gaps = 31/319 (9%)

Query: 606 DSVRLYL-SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVV 664
           D VRL   ++ATL+V P   + +W+ QI QH++ G L   ++    +        +YD++
Sbjct: 499 DEVRLKRNTKATLLVSPLSTIANWEEQIGQHIKEGGLKYHIYHGGTRCREIERLANYDLI 558

Query: 665 ITTFNRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
           ITT+  +++E  RR K      P+ +++W R++LDE H +     L +K      L A  
Sbjct: 559 ITTYGSVASECNRRIKGKPGPYPLEELNWFRIVLDEAHMIREQATLQSK--AICRLQAQC 616

Query: 720 RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ 779
           RW +TGTP  N    +L  L  +LKFL  + + + ++A+   IL P +    E   + L+
Sbjct: 617 RWAVTGTPVQN----RLDDLGALLKFLRLKPFDE-KRAFAQYILAPCKNADPEILPK-LR 670

Query: 780 LLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVE 839
           LL   +   R  D   +P     +  L F  E    Y+         + +      S  E
Sbjct: 671 LLVDSITLRRLKDRINLPPRHDRIIRLAFNREEQELYDIFSKNASDRVKVL----TSQQE 726

Query: 840 SLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLD---------- 889
             L  K +     +I  LRL C    H +     ED++ T  +  ++ ++          
Sbjct: 727 KSLGGKAYVHILQSILRLRLIC---AHGRELLGDEDLKITAGITKDSAIELDDDNDADKP 783

Query: 890 PLSQEYAFIKYNLLNGGNC 908
            LS   A+  YNL+   N 
Sbjct: 784 ALSHRQAYEMYNLMRETNA 802



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 4/140 (2%)

Query: 975  LKQDLYRPNLESNKAL---PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKI 1031
            L QDL     ES+  +   P K ++FS +  H+ +I+  L    IK+  +   M  + + 
Sbjct: 915  LLQDLLASKAESDLMVDQPPIKSVVFSGWTSHLDLIQMALENNDIKYTRLDGKMSRTARG 974

Query: 1032 KSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATR 1090
             +L+ FR D S   +L+   +  LGL+L+   +V++MEP ++ + E Q + R HR+G  R
Sbjct: 975  AALETFRLDPSITVILVSINAGGLGLNLTTANKVYVMEPQYNPAAEAQAVDRVHRLGQKR 1034

Query: 1091 PIHVETLAMRGTVEEQMLEF 1110
             +      M+ + EE+MLE 
Sbjct: 1035 EVETVRYIMKNSFEEKMLEL 1054


>gi|403411804|emb|CCL98504.1| predicted protein [Fibroporia radiculosa]
          Length = 1339

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 71/118 (60%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  IE  L +AGI++  +   M    + ++++  +HD +C  LL+   +
Sbjct: 1186 KTVVFSQWTTMLDKIEDALELAGIRYDRLDGTMKRDERTRAMEALKHDPACEVLLVSLKA 1245

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RV+LM+P W+ ++E Q + R HR+G TRP+    L +  ++E ++LE
Sbjct: 1246 GGVGLNLTAAQRVYLMDPYWNPAVENQAVDRIHRLGQTRPVTTVKLIIENSIEARLLE 1303



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 18/148 (12%)

Query: 681 SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
           S +  VHW RV+LDE H++  +   T   + +  L A  R  LTGTP  N    +L  + 
Sbjct: 778 SALQSVHWFRVVLDEAHSIKET--STVGCRASCDLVADRRLCLTGTPVQN----KLDDVY 831

Query: 741 PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT--------- 791
            ++KFL       ++  W   I  P +     G +R LQ + +C I+ R+T         
Sbjct: 832 ALVKFLRLSPL-DDKGVWTEFIGTPVKYGQPLGVAR-LQTIMKC-ITLRRTKESRAEDGR 888

Query: 792 DLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
            + ++P    E+ +L F E+  G Y++ 
Sbjct: 889 KILSLPPRRDELRYLRFDEQEQGVYDQF 916


>gi|396488055|ref|XP_003842786.1| similar to SNF2 family helicase/ATPase [Leptosphaeria maculans JN3]
 gi|312219363|emb|CBX99307.1| similar to SNF2 family helicase/ATPase [Leptosphaeria maculans JN3]
          Length = 1120

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 21/258 (8%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHL----FVWTDHKKPSAHSLAWDYDVVI 665
           L+ SRATL+V P   + +WK QI++H   G+  L    +  T+  + SA  LA DYD+V+
Sbjct: 536 LFNSRATLLVCPLSTMTNWKEQIKEHFPEGKSALRWARYHGTERYEMSAKDLA-DYDIVV 594

Query: 666 TTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTG 725
           TT++ ++ +   RK+ P+  ++W R++LDE HT+    N T + +   +L    RW +TG
Sbjct: 595 TTYHIIAKDILDRKR-PLAYINWFRIVLDEAHTI---RNPTQQSKATCALNGQRRWAVTG 650

Query: 726 TPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCM 785
           TP  N    +L  L  +  F+  + +  N   ++  IL PF+    E   +L  L+    
Sbjct: 651 TPVQN----RLEDLGALFNFIRLKPFDSN-AGFNQFILNPFKNADPEVVPKLQLLVSTVT 705

Query: 786 ISARKTDLQ-TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNP 844
           I   K  ++  +P     +  L F+ E    ++      +R +      D       L  
Sbjct: 706 IRRTKEIIKHAVPPKSDLIVRLPFSREEQQLHDWFERDTQRKVAAVTQGDK------LGG 759

Query: 845 KQWKFRSTTIRNLRLSCC 862
             +    T I NLRL C 
Sbjct: 760 SSYAKILTAILNLRLICA 777



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 8/153 (5%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K I+FS +  H+ +IE  L      +  +   M    + KS+   R D S   +L+  
Sbjct: 965  PIKSIVFSSWTTHLDLIEIALQAHNHTYVRLDGRMSRDARDKSMQRLREDPSVRVMLVSI 1024

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML- 1108
            G+  LGL+L+   +VF+MEP ++ + E Q + R HR+G  R + ++   M  + EE+ML 
Sbjct: 1025 GAGGLGLNLTTANKVFMMEPQFNPAAEAQAVDRVHRLGQDRDVTIKRFIMDKSFEEKMLV 1084

Query: 1109 -----EFLQDTDRCR-RLLKEELVKPEREGARS 1135
                 + L D    R R  KE+  K   E  RS
Sbjct: 1085 MQKKKKDLADLTMARERKTKEQATKQRLEELRS 1117



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 16/92 (17%)

Query: 163 MKLKLFPHQQAAVEWMLHREWN---------AEVLRHPLYIDLATEDGFYFYVNTVSGDI 213
           +K +L+PHQ+ A+ +M+ +E +          + L  P Y D    +G   Y++ ++G+ 
Sbjct: 424 IKTELYPHQKQALYFMVDKEQDHSGAEYDDRKDSLWKPHYRD----NGRKSYIHVITGEE 479

Query: 214 ATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
            T      R   GG+  DE GLGKT++ LSLI
Sbjct: 480 KTEKP---RPNLGGILADEMGLGKTLSILSLI 508


>gi|425778311|gb|EKV16443.1| SNF2 family helicase/ATPase, putative [Penicillium digitatum Pd1]
          Length = 1130

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 13/184 (7%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
           TL++ P  L+  W+ +I+  V P  +L + ++    +  + ++   YDVVITT+  L++E
Sbjct: 420 TLVIAPLALIKQWEAEIKDKVEPSHKLSVCLYHGTTRAKSSTMLDKYDVVITTYGTLTSE 479

Query: 675 WG-----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP 729
           +      + KK+ +  VHW R++LDE HT+ +        Q A +L A  RW LTGTP  
Sbjct: 480 FNSSASDKAKKAGIFAVHWYRIILDEAHTIKN--RNAKATQSAYALDAQYRWCLTGTPLQ 537

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISAR 789
           N     L  LQ ++KFL  + Y  +  AW   I RP          + LQ+  +  +  R
Sbjct: 538 NN----LDELQSLIKFLRVKPY-DDLAAWRDQISRPLNNGCGGLAIQRLQVYLKAFMKRR 592

Query: 790 KTDL 793
             D+
Sbjct: 593 TKDI 596



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 987  NKALPD-KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
            N+  PD K I+FS F   +  IE  L  A I FA     M ++++  SL+  R+      
Sbjct: 907  NREAPDFKFIVFSVFTSMLDKIEPFLKSANIGFARYDGGMANNHREASLEKLRNHGGTRV 966

Query: 1046 LLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            LL    + +LGL+L+  +RV L+EP W+  +EEQ I R HR+  +  + +  + ++GTVE
Sbjct: 967  LLCSLRAGALGLNLTAASRVVLLEPFWNPFVEEQAIDRVHRLNQSVDVKIYKMVIKGTVE 1026

Query: 1105 EQMLEFLQDTDR 1116
            E+++  LQD  R
Sbjct: 1027 ERIVA-LQDRKR 1037


>gi|425774189|gb|EKV12506.1| SNF2 family helicase/ATPase, putative [Penicillium digitatum PHI26]
          Length = 1132

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 13/184 (7%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
           TL++ P  L+  W+ +I+  V P  +L + ++    +  + ++   YDVVITT+  L++E
Sbjct: 422 TLVIAPLALIKQWEAEIKDKVEPSHKLSVCLYHGTTRAKSSTMLDKYDVVITTYGTLTSE 481

Query: 675 WG-----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP 729
           +      + KK+ +  VHW R++LDE HT+ +        Q A +L A  RW LTGTP  
Sbjct: 482 FNSSASDKAKKAGIFAVHWYRIILDEAHTIKN--RNAKATQSAYALDAQYRWCLTGTPLQ 539

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISAR 789
           N     L  LQ ++KFL  + Y  +  AW   I RP          + LQ+  +  +  R
Sbjct: 540 NN----LDELQSLIKFLRVKPY-DDLAAWRDQISRPLNNGCGGLAIQRLQVYLKAFMKRR 594

Query: 790 KTDL 793
             D+
Sbjct: 595 TKDI 598



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 987  NKALPD-KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
            N+  PD K I+FS F   +  IE  L  A I FA     M ++++  SL+  R+      
Sbjct: 909  NREAPDFKFIVFSVFTSMLDKIEPFLKSANIGFARYDGGMANNHREASLEKLRNHGGTRV 968

Query: 1046 LLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            LL    + +LGL+L+  +RV L+EP W+  +EEQ I R HR+  +  + +  + ++GTVE
Sbjct: 969  LLCSLRAGALGLNLTAASRVVLLEPFWNPFVEEQAIDRVHRLNQSVDVKIYKMVIKGTVE 1028

Query: 1105 EQMLEFLQDTDR 1116
            E+++  LQD  R
Sbjct: 1029 ERIVA-LQDRKR 1039


>gi|358384783|gb|EHK22380.1| hypothetical protein TRIVIDRAFT_54175 [Trichoderma virens Gv29-8]
          Length = 924

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 12/161 (7%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           +R+TLI+ P   + +W+ QI+QHV PG+L   ++    +    +    +D+VITT+  +S
Sbjct: 339 TRSTLIICPLSTITNWEEQIKQHVAPGKLSYHIYHGPNRIKDLARLAQFDIVITTYGSVS 398

Query: 673 AEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            E   R+K+     P+ ++ W R++LDE H +      T + +  + L A  RW +TGTP
Sbjct: 399 NELSSRRKAKTGSFPLEELGWFRIVLDEAHMIRE--QTTMQFKAIVRLQAQRRWAVTGTP 456

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEA 768
             N    +L     +L FL  E +    K +   I+ PF+A
Sbjct: 457 VQN----RLDDFAALLSFLRLEPFHHRSK-FLRHIVEPFKA 492



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 4/140 (2%)

Query: 975  LKQDLYRPNLESN---KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKI 1031
            L +DL +    S+   + LP K ++FS +  H+ +IE  L  A IKF  +   M    + 
Sbjct: 748  LLEDLLKSKAASDANPQELPFKSVVFSGWTSHLDLIELALKEANIKFTRLDGSMTRQART 807

Query: 1032 KSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATR 1090
             ++D FR D S   +L+  +A  LGL+L+    V++MEP ++ + E Q + R HR+G  R
Sbjct: 808  VAMDNFREDRSIHVILVSITAGGLGLNLTAGNNVYVMEPQYNPAAEAQAVDRVHRLGQKR 867

Query: 1091 PIHVETLAMRGTVEEQMLEF 1110
            P+      MR + EE+MLE 
Sbjct: 868  PVRTIRYIMRNSFEEKMLEL 887


>gi|452845846|gb|EME47779.1| hypothetical protein DOTSEDRAFT_97536, partial [Dothistroma
           septosporum NZE10]
          Length = 1057

 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 10/176 (5%)

Query: 595 AALRLALCEPLDSVRLYL-SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS 653
           AA R     P DS  L   SR TLIV P  ++ +W+ QI+ H   G++  + +    +  
Sbjct: 433 AARRFRRVSPPDSEWLECNSRGTLIVCPKSVLSNWQEQIKLHTAEGRMRYYTYHGDSRMQ 492

Query: 654 AHSLAWDYDVVITTFNRLSAEW--GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQM 711
                  YD+V+TT+N  ++E+  G  K   +  ++W R++LDE H + +S   T   + 
Sbjct: 493 DTEELSKYDIVLTTYNTAASEFNSGASKYHALRSINWFRIVLDEAHQIRNS--TTKVFKG 550

Query: 712 AISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFE 767
              L A  RW +TGTP  NT    L+ L  ++KFL  + +  N   W   I+ PF+
Sbjct: 551 CCELEAERRWAVTGTPVQNT----LNDLGALIKFLRLKPF-DNMTTWHQYIMAPFK 601



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 13/166 (7%)

Query: 975  LKQDLYRPNLESNK----ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNK 1030
            L +DL +  +E+++      P + ++FS + +++ ++E  L    I F  +   M    +
Sbjct: 883  LLEDLRQSEIETSQLADGEAPVRSVVFSGWTQYLDLVEFALVQNNIGFVRIDGKMSVKQR 942

Query: 1031 IKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGAT 1089
             +SL +F        +L+   +   GL+ +   + ++MEP ++  +E Q + R HR+G  
Sbjct: 943  SESLKVFNTIPHVRVMLVSIKAGGQGLNFTAANKAYVMEPQFNPGVEHQAVDRIHRIGQK 1002

Query: 1090 RPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARS 1135
            R + ++   M+G+VEE +L   Q         KE+L K   E  RS
Sbjct: 1003 RDVVIKHYIMKGSVEEGILNMQQK--------KEDLAKLSMERKRS 1040


>gi|168015457|ref|XP_001760267.1| SNF2 superfamily RAD5 protein [Physcomitrella patens subsp. patens]
 gi|162688647|gb|EDQ75023.1| SNF2 superfamily RAD5 protein [Physcomitrella patens subsp. patens]
          Length = 1031

 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 17/215 (7%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TLIV P  L+  WK++ + HV    L ++ +    +        ++D+V+TT+  +++E
Sbjct: 497 GTLIVCPMTLLGQWKSEFETHVAGDSLSVYAYYGTDRIRERKALLEHDIVLTTYGVVASE 556

Query: 675 WGRR---KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
             +    +  P+  +HW R++LDE HT+ +    T+K      LTA  RW LTGTP  N 
Sbjct: 557 SNQSNFMEDGPLHSIHWFRIVLDEAHTIKAFRTSTSK--AVFMLTADRRWCLTGTPIQN- 613

Query: 732 PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              +L  +  +L FL  E +  N   W+  + +P E   E G + L  +L   M+   K 
Sbjct: 614 ---KLEDVFSLLHFLRIEPWS-NYSWWEKLVQKPCEEGDERGLNLLQAILQPLMLRRTKD 669

Query: 792 DLQ-------TIPLCIKEVTFLNFTEEHAGTYNEL 819
            L         +P    +V    FTE     Y  L
Sbjct: 670 SLDQHGRPILVLPSVDMQVVECEFTEAEQDFYTAL 704



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 67/116 (57%), Gaps = 1/116 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   + ++E       IKF  +   +    + K L+ FR  +  + +L+   +
Sbjct: 883  KSVVFSQWTAFLDLLEIPFKRKKIKFVRLDGSLSQQQREKVLNDFRSQSDIMVMLISLKA 942

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
              +G++L+  +  FL++P W+ ++EEQ I R HR+G T+ + V+   ++G+VEE+M
Sbjct: 943  GGVGINLTTASNAFLLDPWWNPAVEEQAIMRIHRIGQTKDVQVKRFIVKGSVEEKM 998



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 16/170 (9%)

Query: 98  DCHVLDWKPDSSRVK--PEDNSCSTGISDIADDIVISILTRLGPIDLVRIAATCRHLRCL 155
           D HV D  P   ++K    + S +   +++A++ V S+L+      LV  A  C+     
Sbjct: 296 DRHVGDVTPIVKKLKLSSAEGSTAGAQAEVAEEEV-SVLSDEDVTKLVGSADACKLDEMD 354

Query: 156 AASIMPCMKLKLFPHQQAAVEWMLHREWNAEV-----LRHPLY--IDLATEDGFYFYVNT 208
              I+ C   +L P+Q+ A+ WM   E  A         HP +   DL +E+   FY+N 
Sbjct: 355 PPPILNC---ELRPYQKQALHWMTQLEIGATTEDASRTLHPCWEAYDL-SEENTTFYLNL 410

Query: 209 VSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKT--QGTLADPP 256
            SG+ +           GG+  D  GLGKT+  +S+++    +G LA  P
Sbjct: 411 FSGEASLEFPSASSAARGGILADAMGLGKTVMMISVVMANPGRGGLATDP 460


>gi|451849064|gb|EMD62368.1| hypothetical protein COCSADRAFT_120972 [Cochliobolus sativus
           ND90Pr]
          Length = 1063

 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 142/309 (45%), Gaps = 31/309 (10%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLA----WDYDVVITTF 668
           +RATL+V P   + +WK QI++H   G   L  WT +      S+      DYD+V+TT+
Sbjct: 483 TRATLLVCPLSTMTNWKEQIKEHFPEGNGAL-KWTRYHGAERFSMTPEKLADYDIVLTTY 541

Query: 669 NRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           + ++ +   +K++ +  ++W R++LDE HT+    N TN+ + A ++    RW +TGTP 
Sbjct: 542 HIIAKDIMDKKRA-LPYLNWFRIVLDEAHTI---RNPTNQSKAACNMMGQRRWAVTGTPV 597

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
            N    +L  L  +  F+    +      ++  IL PF++  +    + LQLL   +   
Sbjct: 598 QN----RLEDLGALFNFIKLRPF-DTTAGFNTHILNPFKS-ADPNVVKRLQLLVSTVTIR 651

Query: 789 RKTDL--QTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQ 846
           R  ++  + +P  +  V  L F+ E    ++      +R +L     D       +  K 
Sbjct: 652 RTKEIIKEEVPRKLDYVVRLQFSREEKQLHDWFEKDTQRKVLAVTQGDK------MGGKS 705

Query: 847 WKFRSTTIRNLRLSCCVAGH------IKVTDAGEDIQETMDVLVENGLDP-LSQEYAFIK 899
           +    T I NLRL C           +K TD G    + M++  +    P L+++ A+  
Sbjct: 706 YARILTAILNLRLICAHGRDLLSEEALKTTD-GMTYDQPMEIEDDGQETPQLTRQQAYEM 764

Query: 900 YNLLNGGNC 908
            NLL   N 
Sbjct: 765 LNLLESTNA 773



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K I+FS +  H+ +IE  L  AG     +   M    + KS+ + R   +   +L+  
Sbjct: 908  PIKSIVFSSWTTHLDLIEIALKTAGHALVRLDGRMTRDARDKSMHLLRTSPAIRIMLVSI 967

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            G+  LGL+L+   +VF+MEP ++ + E Q + R HR+G  R + ++   M+ + EE+ML 
Sbjct: 968  GAGGLGLNLTTANKVFMMEPQFNPAAEAQAVDRVHRLGQDREVTIKRFIMQDSFEEKML- 1026

Query: 1110 FLQDTDRC--------RRLLKEELVKPEREGARS 1135
             LQ+  +          R  KEE  K   E  RS
Sbjct: 1027 VLQEKKKALADLTMARERRSKEEATKARLEELRS 1060



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 10/91 (10%)

Query: 161 PCMKLKLFPHQQAAVEWML-----HREWNAEVLRHPLYIDLATEDGFYFYVNTVSGD-IA 214
           P +K +L+PHQ+ A+ +M+     H     +  R P++     ++G   YV+ ++G+  A
Sbjct: 365 PLIKTELYPHQKQALHFMVDHEKDHSSEEFDQRRDPMWTTKTRDNGRISYVHIITGEERA 424

Query: 215 TGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
              AP++    GG+  DE GLGKT++ LSLI
Sbjct: 425 QKPAPSL----GGILADEMGLGKTLSILSLI 451


>gi|395332726|gb|EJF65104.1| hypothetical protein DICSQDRAFT_159356 [Dichomitus squalens
           LYAD-421 SS1]
          Length = 1226

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 27/217 (12%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF---- 668
           SR+TLIVVP  ++ +W+ QI+ HV+PG L   V+    +  + +    YDVVITT+    
Sbjct: 524 SRSTLIVVPLSVMSNWEKQIEDHVQPGALTSCVYYGKTRDMSPTELKKYDVVITTYQTVV 583

Query: 669 --------NRLSAEWGRRKKSP--MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTA 717
                    +      +R+K+   +  + W R++LDEGH +    N   K+  A+ +LTA
Sbjct: 584 QDHELSLVGKAGGPAAKRQKTDKGLFDMQWKRIILDEGHNI---RNSKTKMAKAVCALTA 640

Query: 718 SNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL 777
             RW+LTGTP  N+P      L  +L FL   +   N+  +   +LRP +     G   L
Sbjct: 641 QRRWVLTGTPIINSPKD----LGSILTFLRICSPLDNEDFFKRMVLRPLKDGDPAGAELL 696

Query: 778 LQLL-HRCMISAR----KTDLQTIPLCIKEVTFLNFT 809
             L+ H C+   +    K     +PL   E+T +  T
Sbjct: 697 RALMSHICIRRTKEMQDKDGKPLVPLPPVEITMIPVT 733



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 10/100 (10%)

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + +LGL+L+    V+LM+P W   +E Q I R +R+G  +P++V  L    TVE +++E 
Sbjct: 1106 AGALGLNLTVANNVYLMDPWWQEGIESQAIDRCNRIGQKKPVNVYQLIAENTVESKVMEI 1165

Query: 1111 LQDTDRCRRLLKEELV-------KPEREGARSHRTLHDFA 1143
                ++ ++L+ E          K +++ AR    +H F 
Sbjct: 1166 ---QEKKKKLISEAFAGIKNADTKRQKKEARLQELVHLFG 1202


>gi|402220631|gb|EJU00702.1| hypothetical protein DACRYDRAFT_100756 [Dacryopinax sp. DJM-731
           SS1]
          Length = 1370

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 130/317 (41%), Gaps = 73/317 (23%)

Query: 607 SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP-----SAHSLAWDY 661
           ++R+YLS  TLI+VPS +   W  +I +H   G L   V +   +P      A +LA+ Y
Sbjct: 425 AIRIYLSSLTLILVPSMIFQQWNAEILKHCSDGALR--VLSVPSRPVQDLSPAETLAFQY 482

Query: 662 DVVITTFNRLSAEW----GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQ-MAISLT 716
           DV++ T  R SAE     GRR  SP++ +   R+++DEGH   +     ++L+   + L 
Sbjct: 483 DVILMTHERFSAEGTPTSGRR--SPLLDIRLQRLIIDEGHVANAE---NSRLKDFGLRLN 537

Query: 717 ASNRWLLTGTPTPN----------------TPNS-------------------------- 734
             +RW++TGTPT N                 PN                           
Sbjct: 538 VESRWIVTGTPTKNIKGLKMGSHRKKKKNEVPNGVDVVNSRLELLLSDSASNRPLSAWSR 597

Query: 735 -----QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF---EAEMEEGRSRLLQLLHRCMI 786
                 L  L  M  FL    +     AW   + RP    +        RLL+ L   M+
Sbjct: 598 AHDGDDLKKLGNMFGFLMVPPFVGLDAAWGHVVSRPLLNPQGPEFGAMQRLLRCLEGVMV 657

Query: 787 SARKTDLQT---IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLN 843
             R  D++    +P   +E+  L+ TE  A T+N L+  +  N + ++  D  +   L +
Sbjct: 658 RHRAEDIEKDVPLPDLTQEMVVLDMTEHCAMTHNALLAQIAINAIDSERKDQDY---LFH 714

Query: 844 PKQWKFRSTTIRNLRLS 860
           PK        I NL  S
Sbjct: 715 PKNRGSLGLVIENLSQS 731



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 1/120 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +KV+IFS     +  + +   +  I+F    + +   ++  ++  F        LLM+  
Sbjct: 986  EKVVIFSSSSLSLSHLAEAFELYRIRFLHFSNTLSVKDRENTIKTFETSDIYRVLLMELK 1045

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              + GL+L   +RV+  EP+W    E Q I R HR+G TRP+ V+TL  RGT EE+ +  
Sbjct: 1046 HGARGLNLVSASRVYFCEPVWRADEESQAIKRCHRIGQTRPVTVKTLVTRGTAEEEAIRI 1105



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 15/191 (7%)

Query: 114 EDNSCSTGISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQA 173
           E +S +  +S++  D+   +L    P         C     +  S  P M+  LFP+Q+ 
Sbjct: 155 EQHSDNRSLSEVFQDLPSPVLPSPRPFKNESDRLLCE---AMTWSAPPGMRSILFPYQRR 211

Query: 174 AVEWMLHREWNAEVLRHPLYIDLAT-EDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDE 232
            V  +L +E        P Y+ + + +D   +Y++  + ++ + T  T     GG+ C+E
Sbjct: 212 TVWKLLQQELQPGTWADPRYVRIESLDDERPWYISADTCEVRSDTDVTYDRVKGGILCEE 271

Query: 233 PGLGKTITALSLILKTQGTLADPPDGVK---------IIWCTHNGDPRCGYYDLSGDKLT 283
            G GKT   ++L L T+G +A PP+  +         + W    G+    Y++L   +  
Sbjct: 272 MGSGKTCMCIALCLATKGRMASPPNTPQASRVLTKDSMTWP--GGEENLPYHNLDSGRDP 329

Query: 284 CNNMCLGKRTF 294
             N  +   TF
Sbjct: 330 SENEVIPNITF 340


>gi|326478744|gb|EGE02754.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97]
          Length = 1188

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 15/235 (6%)

Query: 585 KTLDNLAFDLAALRLAL---CEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQL 641
           KTL  L+   ++L  A+   CE      L  ++ TL+V P   V +W  QI++H++ G L
Sbjct: 576 KTLSILSLICSSLSDAMAWACEKPADPSLIKAKTTLLVSPLSAVGNWVGQIKEHIKDGAL 635

Query: 642 HLFVWTDHKKPSAHSLAWDYDVVITTFNRL----SAEWGRRKKSPMMQVHWLRVMLDEGH 697
             +V+    +         YD+VITT+  +    S +  +R  SP+++++  R++LDE H
Sbjct: 636 SYYVFHGPNRTEDPKELARYDIVITTYTTILSDVSGKSSKRGTSPLVRMNMFRIILDEAH 695

Query: 698 TLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKA 757
            +        + Q    L A  RW +TGTP  N    +L  L  +LKFL    Y Q  + 
Sbjct: 696 IIRE--QNAAQSQAIFQLNAQRRWSVTGTPIQN----RLEDLGAVLKFLRLSPYDQRGR- 748

Query: 758 WDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEH 812
           +   I+ PF+ E     + L  L+    +  R  D   +P    +   L FTE+ 
Sbjct: 749 FAAHIVSPFKTENPSAITNLRVLVDSFTLR-RVKDRINLPARHDKTVMLTFTEQE 802



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 8/166 (4%)

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDM 1036
            D    N +S+   P K +IFS +  H+ +IE  L   G+  +  +   M    +  S++ 
Sbjct: 1020 DTAEDNKKSSCQPPIKSVIFSAWTSHLDLIEIALEENGLTGYTRLDGTMSLKQRNASIET 1079

Query: 1037 FRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            F  D +   LL+  G+  +GL+L+  + V++MEP ++ +   Q + R HR+G TR +   
Sbjct: 1080 FSTDNNVTILLVTIGAGGVGLNLTAGSMVYIMEPQYNPAAIAQAVDRVHRIGQTREVTTI 1139

Query: 1096 TLAMRGTVEEQMLEF------LQDTDRCRRLLKEELVKPEREGARS 1135
               M  ++EE++ E       L D    R++ + EL K   E  RS
Sbjct: 1140 QFIMNDSIEEKITELAKRKQKLADMSLNRKMDRRELQKERLEEYRS 1185


>gi|115460732|ref|NP_001053966.1| Os04g0629300 [Oryza sativa Japonica Group]
 gi|39546244|emb|CAE04253.3| OSJNBa0089N06.14 [Oryza sativa Japonica Group]
 gi|113565537|dbj|BAF15880.1| Os04g0629300 [Oryza sativa Japonica Group]
 gi|125549851|gb|EAY95673.1| hypothetical protein OsI_17539 [Oryza sativa Indica Group]
 gi|125591732|gb|EAZ32082.1| hypothetical protein OsJ_16271 [Oryza sativa Japonica Group]
 gi|215717116|dbj|BAG95479.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1051

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 131/622 (21%), Positives = 232/622 (37%), Gaps = 116/622 (18%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
             TL+V P+ ++  W +++   V    +L + V+    +    +    YDVV+TT+  ++ 
Sbjct: 446  GTLVVCPASVLRQWASELAAKVTESSKLSVLVYHGGSRTKDPTELTKYDVVVTTYTIVAN 505

Query: 674  EWGRRK---------------------------------------------KSPMMQVHW 688
            E  ++                                                P+ +V W
Sbjct: 506  EVPKQNFDEDMEEKNSETYGLCPAFSIGNKRKKDSEPKKKKKPKNSDADLDGGPLARVRW 565

Query: 689  LRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHE 748
             RV+LDE  T+ +  + T   +    L A  RW L+GTP  NT +   S+ +  LK+   
Sbjct: 566  FRVVLDEAQTIKN--HNTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFR-FLKYEPY 622

Query: 749  EAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIK------E 802
              YG  +      I R    +   G  +L  +L   ++   K  L      IK      +
Sbjct: 623  SVYGSFRSMIKYQISR----DATRGYKKLQAVLKIVLLRRTKETLIDGEPIIKLPPKTIQ 678

Query: 803  VTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
            ++ ++F++E    Y  L    R      ++     +          F +  +  LRL   
Sbjct: 679  LSKIDFSKEERTFYMMLEEGSREK--FKEYASAGTIRE-------NFANILVLLLRLRQA 729

Query: 863  VAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNG--GNCLR---------- 910
                + +    +D+ +T  V V N    L +E        L G    C R          
Sbjct: 730  CDHPLLLKGKEKDLIDTGSVEVAN---KLPKETVINLLGQLEGDYAICSRCSDPPEDVVV 786

Query: 911  ----HILCLDCV----AMDSEKCSLPGCGFLYEMQ---SPEIL------TRPENPNPKWP 953
                H+ C  CV      D   C  P CG     Q   SP +L                 
Sbjct: 787  ATCGHVFCYQCVHKSLTSDENVCPSPSCGKKLSAQTVFSPGVLRFCIADKLESGATTSSS 846

Query: 954  VPQD----LIELQPSYRQWSNTNTFLKQDLYRPNL--------ESNKALPDKVIIFSQFL 1001
            V  D    + E      +   T   L   +  P L          ++  P K I+FSQ+ 
Sbjct: 847  VEADGSPSICESSYISSKIRATTDILNSIVNTPALTWSDTMESSPSEVAPSKAIVFSQWT 906

Query: 1002 EHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSF 1060
              + ++E  L  + IKF  +   M  + +  ++  F  D     +LM   + +LGL++  
Sbjct: 907  GLLDLLELSLDSSRIKFRRLDGAMSLNLREAAVREFNTDPEVRVMLMSLKAGNLGLNMVA 966

Query: 1061 VTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRL 1120
               V +++P W+   E+Q + RAHR+G TRP+ V  L ++ TVE+++L      ++ R++
Sbjct: 967  ACHVIMIDPWWNPYAEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILAL---QEKKRKM 1023

Query: 1121 LKEELVKPEREGARSHRTLHDF 1142
            ++    + +  G+ +  T+ D 
Sbjct: 1024 VQSAFGEDKPGGSATRLTIDDL 1045


>gi|70992713|ref|XP_751205.1| SWI/SNF family DNA-dependent ATPase Ris1 [Aspergillus fumigatus
           Af293]
 gi|66848838|gb|EAL89167.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus
           fumigatus Af293]
          Length = 1376

 Score = 87.8 bits (216), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 107/243 (44%), Gaps = 46/243 (18%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG--QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           + TLIV P  L+  WK +IQ+ V+PG  QL ++V    K+  ++    DYDVV+TTF  L
Sbjct: 592 KPTLIVAPVSLMQQWKREIQKAVKPGRHQLSVYVLHGDKRAVSYRDMKDYDVVLTTFGTL 651

Query: 672 SAEWGRRKKSPMMQVH-----------------------WLRVMLDEGHTLGSSLNLTNK 708
           S+E  RR+K   +Q                         W RV++DE   + +    T  
Sbjct: 652 SSELKRREKYDELQSAGANEEALSRTLLKNLPCLGPSSLWHRVIIDEAQCIKN--RNTRS 709

Query: 709 LQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEA 768
            Q    L ++ RW ++GTP  NT    +  L  +LKFL    Y    + ++    RP + 
Sbjct: 710 AQACCRLNSTYRWCMSGTPMMNT----VEELHSLLKFLRIRPYSSLDR-FNKDFTRPLKG 764

Query: 769 EMEEGRSRLLQ---------LLHRCMISARKTDLQTI---PLCIKEVTFLNFTEEHAGTY 816
              E R + +Q         LL R   S  K D Q I   P  + E  +  F+E+    Y
Sbjct: 765 PPGESRDKAMQQLQVLVKAVLLRRTKTS--KIDGQPILRLPPRVLEKVYAVFSEDEQAIY 822

Query: 817 NEL 819
           + L
Sbjct: 823 DAL 825



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K IIFSQF   + ++E  +   G  +      M   ++  ++  F  +  C  +L+   
Sbjct: 1094 EKTIIFSQFTALLDLLEVPIVRRGWGYRRYDGSMRPGDRNAAVLEFTDNPDCKIMLVSLK 1153

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A + GL+L   ++V + +P W+  +E+Q I RAHR+G  R +H+  + ++ TVE+++LE 
Sbjct: 1154 AGNAGLNLVAASQVIIFDPFWNPYIEDQAIDRAHRIGQMRQVHIHRILVQKTVEDRILE- 1212

Query: 1111 LQDTDR 1116
            LQ+  R
Sbjct: 1213 LQEKKR 1218


>gi|159130340|gb|EDP55453.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus
           fumigatus A1163]
          Length = 1374

 Score = 87.8 bits (216), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 107/243 (44%), Gaps = 46/243 (18%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG--QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           + TLIV P  L+  WK +IQ+ V+PG  QL ++V    K+  ++    DYDVV+TTF  L
Sbjct: 592 KPTLIVAPVSLMQQWKREIQKAVKPGRHQLSVYVLHGDKRAVSYRDMKDYDVVLTTFGTL 651

Query: 672 SAEWGRRKKSPMMQVH-----------------------WLRVMLDEGHTLGSSLNLTNK 708
           S+E  RR+K   +Q                         W RV++DE   + +    T  
Sbjct: 652 SSELKRREKYDELQSAGANEEALSRTLLKNLPCLGPSSLWHRVIIDEAQCIKN--RNTRS 709

Query: 709 LQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEA 768
            Q    L ++ RW ++GTP  NT    +  L  +LKFL    Y    + ++    RP + 
Sbjct: 710 AQACCRLNSTYRWCMSGTPMMNT----VEELHSLLKFLRIRPYSSLDR-FNKDFTRPLKG 764

Query: 769 EMEEGRSRLLQ---------LLHRCMISARKTDLQTI---PLCIKEVTFLNFTEEHAGTY 816
              E R + +Q         LL R   S  K D Q I   P  + E  +  F+E+    Y
Sbjct: 765 PPGESRDKAMQQLQVLVKAVLLRRTKTS--KIDGQPILRLPPRVLEKVYAVFSEDEQAIY 822

Query: 817 NEL 819
           + L
Sbjct: 823 DAL 825



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K IIFSQF   + ++E  +   G  +      M   ++  ++  F  +  C  +L+   
Sbjct: 1092 EKTIIFSQFTALLDLLEVPIVRRGWGYRRYDGSMRPGDRNAAVLEFTDNPDCKIMLVSLK 1151

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + + GL+L   ++V + +P W+  +E+Q I RAHR+G  R +H+  + ++ TVE+++LE 
Sbjct: 1152 AGNAGLNLVAASQVIIFDPFWNPYIEDQAIDRAHRIGQMRQVHIHRILVQKTVEDRILE- 1210

Query: 1111 LQDTDR 1116
            LQ+  R
Sbjct: 1211 LQEKKR 1216


>gi|326469727|gb|EGD93736.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818]
          Length = 1188

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 15/235 (6%)

Query: 585 KTLDNLAFDLAALRLAL---CEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQL 641
           KTL  L+   ++L  A+   CE      L  ++ TL+V P   V +W  QI++H++ G L
Sbjct: 576 KTLSILSLICSSLSDAMAWACEKPADPSLIKAKTTLLVSPLSAVGNWVGQIKEHIKDGAL 635

Query: 642 HLFVWTDHKKPSAHSLAWDYDVVITTFNRL----SAEWGRRKKSPMMQVHWLRVMLDEGH 697
             +V+    +         YD+VITT+  +    S +  +R  SP+++++  R++LDE H
Sbjct: 636 SYYVFHGPNRTEDPKELARYDIVITTYTTILSDVSGKSSKRGTSPLVRMNMFRIVLDEAH 695

Query: 698 TLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKA 757
            +        + Q    L A  RW +TGTP  N    +L  L  +LKFL    Y Q  + 
Sbjct: 696 IIRE--QNAAQSQAIFQLNAQRRWSVTGTPIQN----RLEDLGAVLKFLRLSPYDQRGR- 748

Query: 758 WDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEH 812
           +   I+ PF+ E     + L  L+    +  R  D   +P    +   L FTE+ 
Sbjct: 749 FAAHIVSPFKTENPSAITNLRVLVDSFTLR-RVKDRINLPARHDKTVMLTFTEQE 802



 Score = 67.0 bits (162), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 8/166 (4%)

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDM 1036
            D    N +S+   P K +IFS +  H+ +IE  L   G+  +  +   M    +  S++ 
Sbjct: 1020 DTAEDNKKSSCQPPIKSVIFSAWTSHLDLIEIALEENGLTGYTRLDGTMSLKQRNASIET 1079

Query: 1037 FRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            F  D +   LL+  G+  +GL+L+  + V++MEP ++ +   Q + R HR+G TR +   
Sbjct: 1080 FSTDNNVTILLVTIGAGGVGLNLTAGSMVYIMEPQYNPAAIAQAVDRVHRIGQTREVTTI 1139

Query: 1096 TLAMRGTVEEQMLEF------LQDTDRCRRLLKEELVKPEREGARS 1135
               M  ++EE++ E       L D    R++ + EL K   E  RS
Sbjct: 1140 QFIMNDSIEEKITELAKRKQKLADMSLNRKMDRRELQKERLEEYRS 1185


>gi|261199876|ref|XP_002626339.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081]
 gi|239594547|gb|EEQ77128.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081]
          Length = 1214

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 73/118 (61%), Gaps = 1/118 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +       I + L + G++F    + + +  + + L +F    +   LLMD  
Sbjct: 937  EKIIIFYEGNNTGFYIAEGLEILGVEFRIYANTLKTQTRSEYLSLFNETETVRVLLMDLR 996

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             AS GL ++  +RVF++ PIWD ++E Q I RAHR+  T+P++VETL ++GT+E++ML
Sbjct: 997  QASHGLHIACASRVFIVNPIWDPNIESQAIKRAHRISQTKPVYVETLVLKGTLEDRML 1054



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 16/134 (11%)

Query: 608 VRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--PSAHSLAWDYDVVI 665
            +L L   TLIVVP  LVDHW ++I +H +   L + V  D ++  P    L  +YD+++
Sbjct: 430 TKLRLCSGTLIVVPPNLVDHWLSEIDKHTQ--GLKVLVLRDSRRATPPPEKL-LEYDILL 486

Query: 666 TTFNRLSAEWG-----------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
            + +R   E G            RK SP+ ++HWLR+++DEGH   +    T  +     
Sbjct: 487 FSKSRFEKEAGGGGRSSGFAPEPRKDSPLKRLHWLRIIVDEGHNFAAKGARTTAVHALSQ 546

Query: 715 LTASNRWLLTGTPT 728
           L    RW+++GTP+
Sbjct: 547 LHVERRWVVSGTPS 560


>gi|327302542|ref|XP_003235963.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892]
 gi|326461305|gb|EGD86758.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892]
          Length = 1053

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 118/248 (47%), Gaps = 34/248 (13%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           +S++TL+V P  L+  W+++I+  + R  +L + V+    +         +DVVITT+  
Sbjct: 341 VSKSTLVVAPLALIKQWESEIESKIERSHRLSVCVYHGTGRTKHRDDLDSFDVVITTYGT 400

Query: 671 LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTP 729
           LS+E G  K      VHW R++LDE HT+    N   K   A+ +L +  RW LTGTP  
Sbjct: 401 LSSEHG--KSDGCFGVHWYRIVLDEAHTIK---NRNAKATQAVYALNSQYRWCLTGTPLQ 455

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRCM 785
           N     L  LQ +++FL  + Y +   AW   I RP    M  GR     R LQ+  +  
Sbjct: 456 NN----LDELQSLIRFLRIKPYDE-LAAWREQITRP----MSNGRGGLALRRLQVYLKAF 506

Query: 786 ISARKTDLQTIPLCIKEVT----FLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESL 841
           +  R  D+  + L  K  T        +++     +E    V+R+I+         +E+ 
Sbjct: 507 MKRRTKDV--LKLDSKPDTEGPNGEELSDDQKQGSSEGFKIVKRDIV--------KIEAE 556

Query: 842 LNPKQWKF 849
            +P++W F
Sbjct: 557 FSPEEWAF 564



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 7/151 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L   GI +A     M +  +  SL+  R+ +    LL    +
Sbjct: 831  KFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASLNRLRNSSGTRVLLCSLRA 890

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L ++GTVEE++LE  
Sbjct: 891  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKVYKLTIKGTVEERILEL- 949

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
               +R R L K  +   E + A    T+ D 
Sbjct: 950  --QERKRELAKSTI---EGKSAAGKLTMKDM 975


>gi|432938267|ref|XP_004082506.1| PREDICTED: helicase-like transcription factor-like [Oryzias
           latipes]
          Length = 951

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 29/194 (14%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           +RATLIV P  ++ +W  Q +QH+ P  +L ++++    +  +       DVVITT+N L
Sbjct: 395 ARATLIVCPLSVLSNWLDQFEQHIHPDVKLGVYLYYGSDRNRSKKFLSSQDVVITTYNVL 454

Query: 672 SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
           SA++G   KSP+  + WLRV+LDEGH + +     +K    + L A  RW+L+GTP  N+
Sbjct: 455 SADFG--NKSPLHGIDWLRVVLDEGHFIRNPNAQMSK--AVLELKAQRRWILSGTPIQNS 510

Query: 732 PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
               +  +  +L FL                L+PF   + E  +R++Q   R ++   +T
Sbjct: 511 ----VKDMWMLLAFLR---------------LKPF--NVREWWNRVIQ---RPVLQGDRT 546

Query: 792 DLQTIPLCIKEVTF 805
            L+ +   +K +T 
Sbjct: 547 GLENLQTLVKYITL 560



 Score = 57.0 bits (136), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 48/95 (50%)

Query: 1016 IKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSM 1075
            ++  G  S    +  IK        +  + LL   +  +GL+L+  + VFLM+P W+ + 
Sbjct: 826  VRLDGSMSQKKRTQVIKEFQSSEAHSPAIMLLSLKAGGVGLNLTAASHVFLMDPAWNPAT 885

Query: 1076 EEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            EEQ I R HR+G    + V    ++ +VEE M++ 
Sbjct: 886  EEQCIDRCHRLGQKNNVVVTKFIVKDSVEENMVKI 920


>gi|239607939|gb|EEQ84926.1| SNF2 family helicase [Ajellomyces dermatitidis ER-3]
          Length = 1214

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 73/118 (61%), Gaps = 1/118 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +       I + L + G++F    + + +  + + L +F    +   LLMD  
Sbjct: 937  EKIIIFYEGNNTGFYIAEGLEILGVEFRIYANTLKTQTRSEYLSLFNETETVRVLLMDLR 996

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             AS GL ++  +RVF++ PIWD ++E Q I RAHR+  T+P++VETL ++GT+E++ML
Sbjct: 997  QASHGLHIACASRVFIVNPIWDPNIESQAIKRAHRISQTKPVYVETLVLKGTLEDRML 1054



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 16/134 (11%)

Query: 608 VRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--PSAHSLAWDYDVVI 665
            +L L   TLIVVP  LVDHW ++I +H +   L + V  D ++  P    L  +YD+++
Sbjct: 430 TKLRLCSGTLIVVPPNLVDHWLSEIDKHTQ--GLKVLVLRDSRRATPPPEKL-LEYDILL 486

Query: 666 TTFNRLSAEWG-----------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
            + +R   E G            RK SP+ ++HWLR+++DEGH   +    T  +     
Sbjct: 487 FSKSRFEKEAGGGGRSSGFAPEPRKASPLKRLHWLRIIVDEGHNFAAKGARTTAVHALSQ 546

Query: 715 LTASNRWLLTGTPT 728
           L    RW+++GTP+
Sbjct: 547 LHVERRWVVSGTPS 560


>gi|294656835|ref|XP_459156.2| DEHA2D15488p [Debaryomyces hansenii CBS767]
 gi|199431779|emb|CAG87327.2| DEHA2D15488p [Debaryomyces hansenii CBS767]
          Length = 1346

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 80/140 (57%), Gaps = 9/140 (6%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS- 1051
            K ++F +F +  + + + L V GIK+    + ++ S +  +L  F +    + L+MD   
Sbjct: 1069 KSLVFFEFEDSAYYLTELLEVLGIKYILYATFINPSQRTNNLAEFSNFPGGVTLIMDLRL 1128

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
            AS GL +   TRV+ + P+W RS+E Q I RAHR+G T+ ++VETL ++GT+EE++    
Sbjct: 1129 ASHGLTIISATRVYFINPVWQRSIEAQAIKRAHRIGQTKDVYVETLVLKGTLEEEIYR-- 1186

Query: 1112 QDTDRCRRLLKEELVKPERE 1131
                  RR + EE V   RE
Sbjct: 1187 ------RRSVDEESVDFGRE 1200



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 105/251 (41%), Gaps = 55/251 (21%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPS-------AHSLAWD- 660
           LYL   TLI++P  L   W  ++++HV P  L  LFV    KKP           L  D 
Sbjct: 494 LYLCNTTLIIIPDNLFHQWNNELKKHVDPSFLDKLFVSNQFKKPMCSQNSTFVSELPDDP 553

Query: 661 -----YDVVITTFNRLSAEWGRRKK--SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI 713
                +D+++ T + L+ ++G   K  +P+  V+W R+++DEGH++ +  + T+ L    
Sbjct: 554 KALVKFDLILITHSLLAKQFGNPNKYDNPLDMVYWKRLIIDEGHSVQAKNSRTSLL--CK 611

Query: 714 SLTASNRWLLTGTPTPN---------------------------TPNSQLSHLQPMLK-- 744
           SL +  RW +TGTPT                                S+ +  + ++K  
Sbjct: 612 SLHSERRWAVTGTPTSGLTRLHMDEEQTETSEKKSGNELKKNHYVVKSKFNEREDLIKLG 671

Query: 745 -----FLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ---TI 796
                FL  E +    KAW   I++P           L  LL+  ++     D++    +
Sbjct: 672 TIVSNFLKIEPFHSQSKAWSNTIIKPLSLNSYGSTVSLSNLLNAIVVRHALKDIEQNLKL 731

Query: 797 PLCIKEVTFLN 807
           P    E  FLN
Sbjct: 732 PSLHHEPVFLN 742


>gi|405119595|gb|AFR94367.1| DNA repair protein rad5 [Cryptococcus neoformans var. grubii H99]
          Length = 942

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 26/221 (11%)

Query: 589 NLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD 648
            L   L  + L L    D V   +S++TLIV P  ++ +W+ QI+ HV P QL  + +  
Sbjct: 314 GLGKTLTTISLVLTTKNDPVGDKVSKSTLIVCPLSVLSNWEKQIRDHVAPSQLTFYTYHG 373

Query: 649 HKKPSAHSLAWDYDVVITTFNRLSAE-----------------WGRRKKSPMMQVHWLRV 691
             K         YD+V+TT+  ++ E                    +K  P+  ++W RV
Sbjct: 374 AAKGLTAKKLGGYDIVLTTYQTVAGEDAAVPHIGDAPLTKKSRPNTKKSGPLTTINWKRV 433

Query: 692 MLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAY 751
           + DEGH L    N   K+  A +L+A  RW+ TGTP  N+PN     L  +L  LH  A 
Sbjct: 434 VADEGHQLK---NPKAKIAFA-NLSAERRWVCTGTPIVNSPND----LGSLLTCLHMCAP 485

Query: 752 GQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
             N + +   +LRP  +  +   S+LLQ +   ++  R  D
Sbjct: 486 LSNPQYFRALLLRPL-SRGDPTASKLLQAVVSQILLRRTKD 525



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 11/154 (7%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH--------DASC 1043
            DK ++FSQF   +  +  +L    IKF      M    + + +  F+         +   
Sbjct: 733  DKTLVFSQFTSFLDCVGVRLQQEEIKFVRFDGRMPGKQRTEVIKTFQEPVKGDDDEETPK 792

Query: 1044 LALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTV 1103
            + L+   S ++GL+L+  + V L +P W  ++E Q I RAHRMG  + + V  L    T+
Sbjct: 793  VMLISLKSGAVGLNLTAASNVVLCDPWWQSAIEAQAIDRAHRMGQKKVVRVFQLIAEDTI 852

Query: 1104 EEQMLEFLQDTDRCRRLLKEELVKPEREGARSHR 1137
            E ++L+  +  D    ++ +   K  +EG ++ +
Sbjct: 853  ESRVLDIQKRKD---AMVAKAFEKSSKEGQKTKK 883



 Score = 43.9 bits (102), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 17/93 (18%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSG------DIATGT--- 217
           L PHQ  A++WM+ RE N ++ ++P   D A +  F+     V        ++AT T   
Sbjct: 244 LLPHQSQALQWMITRE-NPQLPKNP--SDPAVQ--FWVKQRGVGSKPDYWLNVATKTPQS 298

Query: 218 -APTMRDFHGGMFCDEPGLGKTITALSLILKTQ 249
            AP +    GG+  D  GLGKT+T +SL+L T+
Sbjct: 299 EAPQL--GRGGIIADGMGLGKTLTTISLVLTTK 329


>gi|302663877|ref|XP_003023576.1| hypothetical protein TRV_02323 [Trichophyton verrucosum HKI 0517]
 gi|291187579|gb|EFE42958.1| hypothetical protein TRV_02323 [Trichophyton verrucosum HKI 0517]
          Length = 1054

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 117/247 (47%), Gaps = 32/247 (12%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           +S++TL+V P  L+  W+++I+  + R  +L + V+    +         +DVVITT+  
Sbjct: 341 VSKSTLVVAPLALIKQWESEIESKIERSHRLSVCVYHGTGRTKHRDDLDSFDVVITTYGT 400

Query: 671 LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTP 729
           LS+E G  K      VHW R++LDE HT+    N   K   A+ +L +  RW LTGTP  
Sbjct: 401 LSSEHG--KSDGCFGVHWYRIVLDEAHTIK---NRNAKATQAVYALNSQYRWCLTGTPLQ 455

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRCM 785
           N     L  LQ +++FL  + Y +   AW   I RP    M  GR     R LQ+  +  
Sbjct: 456 NN----LDELQSLIRFLRIKPYDE-LAAWREQITRP----MSNGRGGLALRRLQVYLKAF 506

Query: 786 ISARKTD---LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
           +  R  D   L + P   ++      + +     +E    V+R+I+         +E+  
Sbjct: 507 MKRRTKDVLKLDSKP-DTEDPNGEELSNDQKQGPSEGFKIVKRDIV--------KIEAEF 557

Query: 843 NPKQWKF 849
           +P++W F
Sbjct: 558 SPEEWAF 564



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 7/151 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L   GI +A     M +  +  SL+  R+ +    LL    +
Sbjct: 831  KFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASLNRLRNSSGTRVLLCSLRA 890

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L ++GTVEE++LE  
Sbjct: 891  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKVYKLTIKGTVEERILEL- 949

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
               +R R L K  +   E + A    T+ D 
Sbjct: 950  --QERKRELAKSTI---EGKSAAGKLTMKDM 975


>gi|330804465|ref|XP_003290215.1| hypothetical protein DICPUDRAFT_98608 [Dictyostelium purpureum]
 gi|325079679|gb|EGC33268.1| hypothetical protein DICPUDRAFT_98608 [Dictyostelium purpureum]
          Length = 1514

 Score = 87.4 bits (215), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 29/219 (13%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRP---GQLHLFVWTDHK-KPSAHSLAWDYDVVITTFN 669
           +ATL++ PS L + WK ++++H++P     L + ++ + K K    +   + D+VIT+  
Sbjct: 690 KATLLICPSNLSEQWKGEMEKHIKPEIFNSLKIVIYKNAKRKEYTINDLLEADLVITSPE 749

Query: 670 RLSAEW--------GRRKKS----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTA 717
             + E+        G   K+    P++ VHW RV++DE H  G        +Q   +L +
Sbjct: 750 TFTIEYRVFEQAIRGGTSKNPSPPPLLSVHWWRVIIDEAHRFGKKTIFFRGIQ---NLDS 806

Query: 718 SNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL 777
            NRW LT TPTPNT    +  L PML FL+     QN K WD  + R   A ++E  + +
Sbjct: 807 INRWCLTATPTPNT----VHDLYPMLHFLNCYPIAQNTKTWDEIVNRYQVAGVKEFVNPI 862

Query: 778 LQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTY 816
           L   ++     R+          +E+  L+F +E    Y
Sbjct: 863 LITRNKNDSGVRQVKRH------EEIVKLDFDKEEKMAY 895



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 7/130 (5%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASC------LAL 1046
            K ++FSQ+   + +IE+     G      Y        +K  +    + S       + L
Sbjct: 1240 KCLVFSQWTRFLDLIEECFKHNGWNLDEHYCRYDGKVPLKKRESIIKEFSRESGGPRVML 1299

Query: 1047 LMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQ 1106
            +      +GL+L     V++ +P W+ ++EEQ I R  R+  TR + ++   MR T+EE+
Sbjct: 1300 ISLKCGGVGLNLHRANMVYMCDPYWNSAVEEQAIGRVDRLNQTRDLKIKRFVMRDTIEER 1359

Query: 1107 MLEFLQDTDR 1116
            ++  LQDT +
Sbjct: 1360 IMA-LQDTKK 1368



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 5/89 (5%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPL-----YIDLATEDGFYFYVNTVSGDIATGT 217
           ++  L   Q+  + WML RE +  V          ++    +D   FY+N+    I    
Sbjct: 555 LRTSLLGFQREGIWWMLKRETHPYVTFSDAQDKYWFLYTTAKDEIPFYLNSFCDKITFFE 614

Query: 218 APTMRDFHGGMFCDEPGLGKTITALSLIL 246
             T R  +GG+ CDE GLGK+I +++LIL
Sbjct: 615 PITKRRLYGGLNCDEVGLGKSIQSITLIL 643


>gi|336376137|gb|EGO04472.1| hypothetical protein SERLA73DRAFT_82405 [Serpula lacrymans var.
            lacrymans S7.3]
 gi|336389213|gb|EGO30356.1| hypothetical protein SERLADRAFT_412328 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 1320

 Score = 87.4 bits (215), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 70/118 (59%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  +E  L VAGI++  +   M    + ++++  +H+  C  LL+   +
Sbjct: 1167 KTVVFSQWTSMLDKVEDALEVAGIRYDRLDGTMKRDERTRAMEALKHEPGCEVLLVSLKA 1226

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RV+LM+P W+ ++E Q + R HR+G TRP+    L +  ++E ++LE
Sbjct: 1227 GGVGLNLTAAQRVYLMDPYWNPAVENQAVDRIHRLGQTRPVTTVKLIIENSIEARLLE 1284



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 42/264 (15%)

Query: 681 SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
           S +  VHW RV+LDE H++  +  + ++   +  L A  R  LTGTP  N    +L  + 
Sbjct: 760 SALQTVHWFRVVLDEAHSIKETGTVGSR--ASCDLMADRRLCLTGTPVQN----KLDDVF 813

Query: 741 PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQT----- 795
            ++KFL  E +  ++  W   I  P +     G +R LQ + +C I+ R+T   T     
Sbjct: 814 ALIKFLRLEPF-DDKNTWTEFIGTPVKYGQPLGVAR-LQTIMKC-ITLRRTKETTAQDGK 870

Query: 796 ----IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS 851
               +P    E+ +L F E+    Y+      +     A++N+ S+   ++  K +    
Sbjct: 871 RILSLPPRRDELRYLRFDEQEKEIYDHFFSESK-----AEFNELSNKNEVM--KNYVGIL 923

Query: 852 TTIRNLRLSC----CVAGHIKVTDAGEDIQETMDVLV---ENGLDPLSQEYAFIKYNLLN 904
             I  LR  C     V G   +  + +DI    D++    + G+D       F       
Sbjct: 924 QKILRLRQICDHFELVQGK-GLGGSQQDITSYDDIVAAIEKEGIDVRRASAIFA------ 976

Query: 905 GGNCLRHILCLDCVAMDSEKCSLP 928
               LR      CV   +E CS P
Sbjct: 977 ---LLREAATTQCVECGAELCSPP 997


>gi|296809169|ref|XP_002844923.1| DNA repair protein RAD5 [Arthroderma otae CBS 113480]
 gi|238844406|gb|EEQ34068.1| DNA repair protein RAD5 [Arthroderma otae CBS 113480]
          Length = 919

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 18/196 (9%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           S+ TLI+ P  ++ +W+ QI  H+     L +  +    K  A +LA  YDVVITT+  L
Sbjct: 383 SKTTLIISPLGVMSNWRDQIAAHIFDEHALSVLTYHGPGKKEAANLA-KYDVVITTYGAL 441

Query: 672 SAEWGR---------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
           ++E+G+         + K  +  VHW RV+LDEGHT+ +    T   + A  L A +RW 
Sbjct: 442 ASEYGQLLGATGKLAKAKKGLFSVHWRRVVLDEGHTIRTP--KTKAARAACLLEADSRWS 499

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           LTGTP  N     L  L    KF+      ++   +   ++RP  A  +E  S LLQ L 
Sbjct: 500 LTGTPIVNN----LKDLYSQGKFIRLSGGLEDLPVFHSALIRPLNAG-DENASLLLQALM 554

Query: 783 RCMISARKTDLQTIPL 798
             +   R+ D+  + L
Sbjct: 555 ATICLRRRKDMSFVNL 570



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 1/161 (0%)

Query: 977  QDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDM 1036
            Q L +  +   + L  K ++FSQ+   + +IE QL++  I FA +   M+S+ +  ++  
Sbjct: 750  QALIKILMAKGQVLGTKTVVFSQWTSFLDLIEPQLSLNNINFARIDGKMNSAKRDAAMRK 809

Query: 1037 FRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
              HD  C  +L      S+GL+L    +V L +  W  ++E+Q + R +R+G TRP  + 
Sbjct: 810  LTHDPECTVMLASLNVCSVGLNLVAANQVILADSWWAPAIEDQAVDRVYRLGQTRPTTIW 869

Query: 1096 TLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSH 1136
             L M  ++E+++L+  ++         +E   P+ +  RS 
Sbjct: 870  RLVMEDSIEDRVLDIQKEKRELMTTAFQEKAGPKDQAQRSR 910


>gi|317159396|ref|XP_001827279.2| hypothetical protein AOR_1_1414024 [Aspergillus oryzae RIB40]
          Length = 1090

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 5/153 (3%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +KV+IFSQF   + +IE  L   G  F      M  +++  +   F  D  CL LL+   
Sbjct: 899  EKVVIFSQFTSMLDLIEVPLARHGWAFRRYDGTMKPADRHAATVHFATDPDCLILLVSMK 958

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A + GL+L+  ++V +++P W+  +E+Q + R HR+G  RP+HV  + +  TVE+++L+F
Sbjct: 959  AGNSGLNLTAASQVIILDPFWNPYVEDQAVGRVHRIGQRRPVHVHRILVSNTVEDRILDF 1018

Query: 1111 LQDTDRCRRLLKEELVKPEREGARSHRTLHDFA 1143
                DR R+L+ E +V     G  S     DFA
Sbjct: 1019 ---QDRKRQLI-EGIVDHRTHGEPSRLESTDFA 1047



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 128/303 (42%), Gaps = 48/303 (15%)

Query: 589 NLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVR--PGQLHLFVW 646
            L   + AL L    P   +  +   ATL+V P+ L+  WK +I+Q +R  P +  ++V+
Sbjct: 379 GLGKTVQALALIAAHPAQHINRH---ATLVVTPASLIQQWKHEIEQFLRSSPHRQRVYVY 435

Query: 647 TDHKKPSAHSLAWDYDVVITTFNRLSAEW-------------GRRKKSPMM--QVHWLRV 691
              ++  A  +   YD+V+TTF  ++AE              G  + SP+      W RV
Sbjct: 436 YGDRRGKAIPVLNGYDIVLTTFGTITAELRRTGPRQHARNLAGPHRSSPLFGPASGWHRV 495

Query: 692 MLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAY 751
           +LDE   + +  + T       +L A+ RW L+GTP  N     L  L  +LKFL  + Y
Sbjct: 496 ILDEAQCIKNDQSQTAA--ACCALDATYRWCLSGTPVMN----NLRELYSLLKFLRVQPY 549

Query: 752 GQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCM--ISARKTDLQTI--------PLCIK 801
              Q ++     +P +      R+     L R M  I  R+T   TI        P+   
Sbjct: 550 ASRQ-SFATAFQQPLQTRGSPQRAAATARLRRLMDTIMLRRTKTSTIQGQPILQLPVQTT 608

Query: 802 EVTFLNFTEEHAGTYNELVVTVRR--NILMADWNDPSHVESLLNPKQWKFRSTTIRNLRL 859
           E+ ++ FTE     Y  L    R   N  ++  N   +V  +L           ++ LR 
Sbjct: 609 EIVYVTFTEPERELYTALECHTRLQFNHYLSGGNPSRNVSHMLG---------LLQRLRQ 659

Query: 860 SCC 862
           +CC
Sbjct: 660 ACC 662


>gi|322707430|gb|EFY99008.1| DNA repair and recombination protein RAD5B [Metarhizium anisopliae
           ARSEF 23]
          Length = 769

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 28/241 (11%)

Query: 599 LALCEPLDSVRLYL---SRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSA 654
           + L + L  + L L   S  TLIV P  ++ +W+ QI +HV+   L  + V+   KK +A
Sbjct: 312 MGLGKTLQILSLILTGGSGTTLIVAPVGVMSNWQQQIDRHVKSEHLPRVLVYHGDKKMTA 371

Query: 655 HSLAWDYDVVITTFNRLSAEWGRRKKSPMMQV------HWLRVMLDEGHTLGSSLNLTNK 708
             L  ++DVVIT++ +L+    R K S + QV       W RV+LDEGHT+    N   K
Sbjct: 372 KEL-MNFDVVITSYGKLA----REKDSNVPQVLLSQSIRWKRVVLDEGHTI---RNARTK 423

Query: 709 LQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFE 767
           + +A  ++ A +RW+LTGTP  N+    +  LQ ++KFLH     ++ + ++  I R   
Sbjct: 424 VALAACAIKAKSRWVLTGTPIINS----VKDLQSLIKFLHITGGIEHPEIFNTRITRRL- 478

Query: 768 AEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKE----VTFLNFTEEHAGTYNELVVTV 823
              +     +LQ L + +   RK D++ + L I E    +  + F  E    Y  L+   
Sbjct: 479 VSGDASAEIMLQALMQDICLRRKKDMKFVDLKIPEKKEYLHRITFHPEEKRKYEALLTEA 538

Query: 824 R 824
           R
Sbjct: 539 R 539



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 88/154 (57%), Gaps = 5/154 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            KV+IFSQ+   +++I+ QL +AGIK++ +   M++  + +++    +DA    +L   + 
Sbjct: 616  KVVIFSQWTSFLNIIQNQLDIAGIKYSRIDGSMNTEKRDRAVRALDNDAETRVMLASLAV 675

Query: 1053 -SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S+GL+L     V L +  W  ++E+Q I R HR+G TR   V  L + GTVEE++L+  
Sbjct: 676  CSVGLNLVSADTVILSDSWWAPAIEDQAIDRVHRLGQTRKTTVWRLIVEGTVEERVLDVQ 735

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHRT-LHDFAE 1144
            ++    R L+ +   + ER+G  +  T + D A+
Sbjct: 736  KEK---RDLVTKAFQEKERKGKHTKDTRMADIAK 766



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 12/131 (9%)

Query: 140 IDLVRIAATCR-HLRCLAASIMPC-MKLKLFPHQQAAVEWMLHREWNA---EVLRHPLYI 194
           ID ++  AT   +LR + +   P  +K  L P+Q   + WM  +E  A   + L + + +
Sbjct: 219 IDALKTFATDEEYLRNMPSCDQPAALKATLLPYQLQGLAWMTSKENPALPTKELGNQVQL 278

Query: 195 DLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILK--TQGTL 252
                 G Y+ V T   D  + TAP +  F GG+  D+ GLGKT+  LSLIL   +  TL
Sbjct: 279 WKQNIRGNYWNVAT---DFVSATAPQL--FSGGILADDMGLGKTLQILSLILTGGSGTTL 333

Query: 253 ADPPDGVKIIW 263
              P GV   W
Sbjct: 334 IVAPVGVMSNW 344


>gi|410897569|ref|XP_003962271.1| PREDICTED: transcription termination factor 2-like [Takifugu
           rubripes]
          Length = 1079

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 120/245 (48%), Gaps = 44/245 (17%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW-TDHKKPSAHSLAWDYDVVITTF 668
           L  S+ATLI+ P+ L+ HWK +I +HV   +L ++++   +++ SA +LA DYDVV+TT+
Sbjct: 520 LVASKATLIICPTSLIHHWKREIDRHVSSSELSVYLYHGPNRERSARALA-DYDVVVTTY 578

Query: 669 NRLSAEWGRRKK--------------SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAI 713
           + +S E   +K+              S + +V W RV+LDE H      N+ N K+Q ++
Sbjct: 579 SLVSQEIPVQKEEAEKPNKDDAPPSSSTLFRVAWERVVLDEAH------NIKNPKVQTSM 632

Query: 714 S---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEM 770
           +   L A  RW +TGTP  N     L  +  +LKFL    + +  K W   +    +   
Sbjct: 633 ATCQLKAHARWAVTGTPIQNN----LLDMYSLLKFLRYSPFDEF-KLWKAQV----DNGS 683

Query: 771 EEGRSRLLQLLHRCMISARKTD--------LQTIPLCIKEVTFLNFTEEHAGTYNELVVT 822
           + GR R L +L R ++  R  D        L T+P    EV  L  ++     Y+ +   
Sbjct: 684 DTGRER-LHILTRSLLLRRTKDQKDAAGSPLVTLPGLTCEVHRLKLSQYEKAVYDVVFAQ 742

Query: 823 VRRNI 827
            R  +
Sbjct: 743 SRSTL 747


>gi|414886859|tpg|DAA62873.1| TPA: hypothetical protein ZEAMMB73_835679 [Zea mays]
          Length = 679

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 1/121 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K I+FSQF   + +I+  L  +GIK   +   M+ + K +++D F HDA C   LM   A
Sbjct: 528  KGIVFSQFTSFLDLIQFSLERSGIKCVQLNGAMNITEKGRAIDTFTHDADCRVFLMSLKA 587

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              + L+L+  + VFLM+P W+ ++E Q   R HR+G  +PI      ++ TVEE++L+  
Sbjct: 588  GGVALNLTVASHVFLMDPWWNPAVENQAQDRIHRIGQFKPIKSTRFVIKDTVEERILQLQ 647

Query: 1112 Q 1112
            Q
Sbjct: 648  Q 648



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 662 DVVITTFNRLSAEWGR--RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
           D V   F  L+ E GR  R +SP+  V W RV+LDE H +       N  +   +L +  
Sbjct: 172 DEVNKDFQELADELGRQLRGQSPLHSVRWERVILDEAHFIKD--RRCNTARAVFALESEC 229

Query: 720 RWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
           +W L+GTP  N    ++  L  +++FL 
Sbjct: 230 KWALSGTPLQN----RVGELYSLIRFLQ 253


>gi|164659924|ref|XP_001731086.1| hypothetical protein MGL_2085 [Malassezia globosa CBS 7966]
 gi|159104984|gb|EDP43872.1| hypothetical protein MGL_2085 [Malassezia globosa CBS 7966]
          Length = 789

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 184/449 (40%), Gaps = 67/449 (14%)

Query: 682  PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQP 741
            P+ +++WLRV+LDE   + +     ++    +S  A+ RW ++GTP  N      S    
Sbjct: 380  PLFEMNWLRVVLDEAQNIKNHRAKCSQACYQLSARAAARWCISGTPVQNNALEIFS---- 435

Query: 742  MLKFLHEEAYGQNQKAWDGGILRPF----EAEMEEGRSRLLQLLHRCMISARKTD----- 792
            ++ FL    +  + + ++  I  P     ++++E G  RL  +L   M+   K       
Sbjct: 436  LIHFLRISPFN-DMRHFEEQIHEPLKSGNQSQVELGLQRLGIILKSIMLRRTKDAHYEGR 494

Query: 793  --LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFR 850
              L   P  +K V+    T      Y+EL   ++           SH+++  +P Q  + 
Sbjct: 495  RILDLPPRIVKVVSRDFMTTSERDFYHELEDRIQ-----------SHLDANKSP-QLNYM 542

Query: 851  STTIRNLRLS------CCVAGHIKV--TDAGEDIQETMDVLVENGLDPLSQEYAFIKYNL 902
               +  LRL         V G  ++   DA E + E      +  L       A +    
Sbjct: 543  GALVMLLRLRQACNHPALVTGRSRLPAEDASEPVAEEDGQDEDEEL------AALLSGLS 596

Query: 903  LNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQ 962
            +   NC R  + LD      +K    GC    E +        E     W +P  +    
Sbjct: 597  VKTRNCDRCQVPLDA---KQKKRLCTGCASQSEHE--------EKHGIIWGMPGTM---- 641

Query: 963  PSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMY 1022
                     +T L   L   +   N++  DK I+FSQF   + ++E  L   G  F    
Sbjct: 642  ---------STKLDMMLRLLDDFDNQSKGDKTIVFSQFTSFLDLVEDALRARGYNFTRYD 692

Query: 1023 SPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVIS 1081
              M  + + ++L   R D     +L+   A S GL+L+   RV L +  W+  +EEQ   
Sbjct: 693  GSMRRNAREEALQRIRTDDGVRVILISFKAGSTGLNLTCCNRVILCDLWWNPQIEEQAFD 752

Query: 1082 RAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            RAHR+G T+ +++  L++ GTVE+++L  
Sbjct: 753  RAHRLGQTKSVYIYKLSIDGTVEQRILAL 781


>gi|367048557|ref|XP_003654658.1| hypothetical protein THITE_125023 [Thielavia terrestris NRRL 8126]
 gi|347001921|gb|AEO68322.1| hypothetical protein THITE_125023 [Thielavia terrestris NRRL 8126]
          Length = 857

 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 17/271 (6%)

Query: 556 GETQGFHKIFQA---FGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYL 612
           GE  G H+  Q    +G I     G+ +     +L  +A DL A+  A    LD+     
Sbjct: 317 GEVSGAHQYEQPPPFYGGIIADPMGLGKTLTMISL--VATDLDAIHAAENVALDADEQAK 374

Query: 613 SR--ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
            R  ATLI++P  L+  W+ Q+ +HV PG +         + S        ++V+TT++ 
Sbjct: 375 PRVSATLIIIPPPLIGTWEEQLTEHVMPGGMEFRRHHGKTRLSNIGELDGVNIVLTTYHT 434

Query: 671 LSAEW---GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
           +SAEW    +   S +  V W R++LDE H + +    +   + A  L + +RW +TGTP
Sbjct: 435 VSAEWKPDNQPASSVLFSVRWRRIILDEAHFIRN--GNSRMARAACELDSVSRWAVTGTP 492

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
             N    ++S L   LKF+    Y  + K ++  I R +++  +E  ++ L+ L  C++ 
Sbjct: 493 IQN----RISDLAAQLKFIRAYPYN-DPKQFEADISRLWKSGEDEETAKRLKCLSACLLL 547

Query: 788 ARKTDLQTIPLCIKEVTFLNFTEEHAGTYNE 818
            R     ++P        ++F+ E    Y+E
Sbjct: 548 RRAKATISLPARRDMTCPVDFSREERAAYDE 578



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 1045 ALLMDGSASLG----LDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR 1100
            AL+ D SA       L L+  +R +LMEP W+ ++EEQ ++R HR+G TR +      +R
Sbjct: 754  ALVADISAVPADVKCLTLTVASRAYLMEPHWNPTLEEQALARIHRIGQTREVTTVRFYIR 813

Query: 1101 GTVEEQMLEFLQDTDRCRRLL 1121
             + EE+++E      +  R+L
Sbjct: 814  DSFEERVMELQNVKQQLARVL 834


>gi|301092959|ref|XP_002997329.1| DNA repair protein, putative [Phytophthora infestans T30-4]
 gi|262110818|gb|EEY68870.1| DNA repair protein, putative [Phytophthora infestans T30-4]
          Length = 736

 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K IIFSQF+  + +I+ +L + G+K   +   M  S + +++  FR D +  A L+   A
Sbjct: 585  KAIIFSQFVNMLDIIQHRLQLGGVKCVKLSGNMSMSVRDRTIKAFRDDPTVTAFLISLKA 644

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              + L+L+  + +FLM+P W+ + E Q I R HR+G  +PI      + GTVEE++L+ L
Sbjct: 645  GGVALNLTVASHIFLMDPWWNPAAENQAIDRTHRLGQFKPIQATRFIIAGTVEERILK-L 703

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 704  QEKKR 708



 Score = 43.9 bits (102), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 678 RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLS 737
           + KSP+ Q+ W R++LDE H +       N  +    L ++ +W L+GTP  N    ++ 
Sbjct: 228 KGKSPLHQIQWTRIVLDEAHYIKD--RNCNTARGVFELKSTYKWCLSGTPLQN----RIG 281

Query: 738 HLQPMLKFLHEEAYG 752
            L  +++FL  + Y 
Sbjct: 282 ELFSLVRFLQVKKYA 296



 Score = 43.5 bits (101), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 35/60 (58%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TL+V P   V  WK++I++ V PG L +++    K+ +       YD+V+TT++ + +E
Sbjct: 78  GTLVVCPLVAVMQWKSEIERFVEPGHLSVYIHHGSKRLNLVERIASYDIVLTTYSIIESE 137


>gi|119473011|ref|XP_001258467.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Neosartorya
           fischeri NRRL 181]
 gi|119406619|gb|EAW16570.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Neosartorya
           fischeri NRRL 181]
          Length = 1276

 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 116/266 (43%), Gaps = 54/266 (20%)

Query: 599 LALCEPLDSVRLYLSRA--------TLIVVPSYLVDHWKTQIQQHVRPG--QLHLFVWTD 648
           + L + + ++ L +SR         TLIV P  L+  WK +IQ+ V+PG  QL ++V   
Sbjct: 580 MGLGKTIQAIALMVSRPSTDPERKPTLIVAPVSLMQQWKREIQKAVKPGRHQLSVYVLHG 639

Query: 649 HKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVH--------------------- 687
            K+  ++    DYDVV+TTF  LS+E  RR+K   +Q                       
Sbjct: 640 DKRAVSYRDLKDYDVVLTTFGTLSSELKRREKYDELQSAGANEEALSRTLLKNLPCLGPS 699

Query: 688 --WLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKF 745
             W R+++DE   + +    T   Q    L ++ RW ++GTP  NT    +  LQ +LKF
Sbjct: 700 SLWHRIIIDEAQCIKN--RNTRSAQACCRLNSTYRWCMSGTPMMNT----VEELQSLLKF 753

Query: 746 LHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ---------LLHRCMISARKTDLQTI 796
           L    Y    + ++    RP +    E R + +Q         LL R   S  K D Q I
Sbjct: 754 LRIRPYSSIDR-FNKDFTRPLKGPPGEPRDKAMQQLQVLVKAVLLRRTKTS--KIDGQPI 810

Query: 797 ---PLCIKEVTFLNFTEEHAGTYNEL 819
              P  + E     F+E+    Y+ L
Sbjct: 811 LRLPPRVLEKVHAVFSEDEQAIYDAL 836



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K IIFSQF   + ++E  +   G  +      M   ++  ++  F  +  C  +L+   
Sbjct: 1111 EKTIIFSQFTSLLDLLEVPIVRRGWGYRRYDGSMRPGDRNAAVLEFTDNPDCKIMLVSLK 1170

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + + GL+L   ++V + +P W+  +E+Q I RAHR+G  R +H+  + ++ TVE+++LE 
Sbjct: 1171 AGNAGLNLVAASQVIIFDPFWNPYIEDQAIDRAHRIGQMRQVHIHRILVQKTVEDRILE- 1229

Query: 1111 LQDTDR 1116
            LQ+  R
Sbjct: 1230 LQEKKR 1235


>gi|58261298|ref|XP_568059.1| SWI/SNF related, matrix associated, actin dependent regulator of
           chromatin, subfamily a, member 3 [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|57230141|gb|AAW46542.1| SWI/SNF related, matrix associated, actin dependent regulator of
           chromatin, subfamily a, member 3, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 900

 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 26/222 (11%)

Query: 589 NLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD 648
            L   L  + L L    D V   +S++TLIV P  ++ +W+ QI+ HV P QL  + +  
Sbjct: 315 GLGKTLTTISLVLATKNDPVGDKVSKSTLIVCPLSVLSNWEKQIRDHVAPSQLRFYTYHG 374

Query: 649 HKKPSAHSLAWDYDVVITTFNRLSAE-----------------WGRRKKSPMMQVHWLRV 691
             K         YD+V+TT+  ++ E                     K  P+  + W RV
Sbjct: 375 AAKGLTAKKLGGYDIVLTTYQTVAGEDAAVPHTGDTPLAKKSRPSTTKSGPLATIKWKRV 434

Query: 692 MLDEGHTLGSSLNLTNKLQMAIS-LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEA 750
           + DEGH L    N   K+ +A + L+A  RW+ TGTP  N+PN     L  +L  LH  A
Sbjct: 435 VADEGHQLK---NPKAKMTIAFANLSAERRWICTGTPIVNSPND----LGSLLTCLHICA 487

Query: 751 YGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
              N + +   +LRP  +  +   S+LLQ +   ++  R  D
Sbjct: 488 PLSNPQYFRALLLRPL-SRGDPTASKLLQAVVSQILLRRTKD 528



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 11/154 (7%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH--------DASC 1043
            DK ++FSQF   +  +  +L   G+KF      M    + + +  F+         +A  
Sbjct: 736  DKTLVFSQFTSFLDCVGVRLEQEGVKFVRFDGRMPGKQRTEVIKAFQEPVKGDDDEEAPT 795

Query: 1044 LALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTV 1103
            + L+   S ++GL+L+  + VFL +P W  ++E Q I RAHRMG  + + V  L    T+
Sbjct: 796  VMLISLKSGAVGLNLTAASNVFLCDPWWQSAIEAQAIDRAHRMGQKKVVRVFQLIAEDTI 855

Query: 1104 EEQMLEFLQDTDRCRRLLKEELVKPEREGARSHR 1137
            E ++L+  +  D    ++ +   K  +E  R+ +
Sbjct: 856  ESRVLDIQKRKD---AMVAKAFEKSSKESQRTKK 886



 Score = 45.1 bits (105), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 21/95 (22%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSG--------DIATGT- 217
           L PHQ  A++WM+ RE N ++ + P      +E    F+V             ++AT T 
Sbjct: 245 LLPHQSQALQWMITRE-NPQLPKSP------SEPAVQFWVKQKGVGSKPDYWLNVATKTP 297

Query: 218 ---APTMRDFHGGMFCDEPGLGKTITALSLILKTQ 249
              AP +    GG+  D  GLGKT+T +SL+L T+
Sbjct: 298 QSEAPQL--GRGGIIADGMGLGKTLTTISLVLATK 330


>gi|83776027|dbj|BAE66146.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 966

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 5/153 (3%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +KV+IFSQF   + +IE  L   G  F      M  +++  +   F  D  CL LL+   
Sbjct: 812  EKVVIFSQFTSMLDLIEVPLARHGWAFRRYDGTMKPADRHAATVHFATDPDCLILLVSMK 871

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A + GL+L+  ++V +++P W+  +E+Q + R HR+G  RP+HV  + +  TVE+++L+F
Sbjct: 872  AGNSGLNLTAASQVIILDPFWNPYVEDQAVGRVHRIGQRRPVHVHRILVSNTVEDRILDF 931

Query: 1111 LQDTDRCRRLLKEELVKPEREGARSHRTLHDFA 1143
                DR R+L+ E +V     G  S     DFA
Sbjct: 932  ---QDRKRQLI-EGIVDHRTHGEPSRLESTDFA 960



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 128/303 (42%), Gaps = 48/303 (15%)

Query: 589 NLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVR--PGQLHLFVW 646
            L   + AL L    P   +  +   ATL+V P+ L+  WK +I+Q +R  P +  ++V+
Sbjct: 292 GLGKTVQALALIAAHPAQHINRH---ATLVVTPASLIQQWKHEIEQFLRSSPHRQRVYVY 348

Query: 647 TDHKKPSAHSLAWDYDVVITTFNRLSAEW-------------GRRKKSPMM--QVHWLRV 691
              ++  A  +   YD+V+TTF  ++AE              G  + SP+      W RV
Sbjct: 349 YGDRRGKAIPVLNGYDIVLTTFGTITAELRRTGPRQHARNLAGPHRSSPLFGPASGWHRV 408

Query: 692 MLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAY 751
           +LDE   + +  + T       +L A+ RW L+GTP  N     L  L  +LKFL  + Y
Sbjct: 409 ILDEAQCIKNDQSQTAA--ACCALDATYRWCLSGTPVMN----NLRELYSLLKFLRVQPY 462

Query: 752 GQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCM--ISARKTDLQTI--------PLCIK 801
              Q ++     +P +      R+     L R M  I  R+T   TI        P+   
Sbjct: 463 ASRQ-SFATAFQQPLQTRGSPQRAAATARLRRLMDTIMLRRTKTSTIQGQPILQLPVQTT 521

Query: 802 EVTFLNFTEEHAGTYNELVVTVRR--NILMADWNDPSHVESLLNPKQWKFRSTTIRNLRL 859
           E+ ++ FTE     Y  L    R   N  ++  N   +V  +L           ++ LR 
Sbjct: 522 EIVYVTFTEPERELYTALECHTRLQFNHYLSGGNPSRNVSHMLG---------LLQRLRQ 572

Query: 860 SCC 862
           +CC
Sbjct: 573 ACC 575


>gi|224139696|ref|XP_002323232.1| chromatin remodeling complex subunit [Populus trichocarpa]
 gi|222867862|gb|EEF04993.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 803

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 16/219 (7%)

Query: 606 DSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLF-VWTDHKKPSAHSLAWDYDVV 664
           +S    +++ TL+V PS +   W+ Q+Q+H + G L L+  + D++   A  L   YD+V
Sbjct: 289 ESSSALVAKKTLVVCPSAVCSTWENQLQEHTQNGSLKLYKYYGDNRTKDAEELM-KYDIV 347

Query: 665 ITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLT 724
           +TT++ L AE     + P+M++ W RV+LDE H + ++     +++    LTA  RW +T
Sbjct: 348 LTTYSTLVAEGCEPTRCPLMKIEWWRVILDEAHVIKNA--NAKQIRDFSKLTARRRWAVT 405

Query: 725 GTPTPNTPNSQLSHLQPM-LKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
           G P  N      S +    L  L  E Y      W     +P     E+G SRL +L+  
Sbjct: 406 GAPIQNGSFDLFSLMVFFRLDPLSTECY------WQRLFQKPLANGDEKGFSRLQKLM-- 457

Query: 784 CMISARKT---DLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
             IS R+    DL  +P    E      + E    Y+++
Sbjct: 458 ATISLRRIKDKDLVGLPSKTVETVSFELSGEERVLYDQM 496



 Score = 41.2 bits (95), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 10/83 (12%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           +K KL  HQ+  + W++ +E + E+   P + ++  +DG Y  V T      T   P   
Sbjct: 156 IKAKLLDHQKEGLWWLVTKEKSDEL---PPFWEV--KDGSYLNVLTRH---QTDRRP--E 205

Query: 223 DFHGGMFCDEPGLGKTITALSLI 245
             HGG+F D  G GKT+T LSLI
Sbjct: 206 PLHGGIFSDHYGSGKTLTLLSLI 228


>gi|449300361|gb|EMC96373.1| hypothetical protein BAUCODRAFT_472676 [Baudoinia compniacensis
           UAMH 10762]
          Length = 1118

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 128/284 (45%), Gaps = 22/284 (7%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           + TLI+ P  ++ +W+ QIQQHV+ G L  + +    + +       YDVV+TT+N  + 
Sbjct: 519 KGTLIICPKSVMSNWQEQIQQHVQKGALTFYNYHGASRTNDPEELAKYDVVLTTYNTAAF 578

Query: 674 EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
           ++  + ++ +   +W R++LDE H + +     +K    + L A+ RW +TGTP  N   
Sbjct: 579 DFNAKDRA-LGATNWFRIVLDEAHAIRNQNTAVSK--ACVDLAAARRWAVTGTPVQNG-- 633

Query: 734 SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL---LQLLHRCMISARK 790
             L  L  ++KFL    +   Q  W   I+     +++ G +     L+LL   +   R 
Sbjct: 634 --LGDLGALIKFLKVRPFDDAQ-TWSREII----TQLKSGNTNTIGHLRLLVDSITLRRM 686

Query: 791 TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFR 850
            D   + L  +    L F +E    Y+ +    RR+  + +      V   L  K +   
Sbjct: 687 KDRIGLKLREELNIQLEFGKEERRIYDNIAAQSRRDFELMER---GAVRGKLQGKAYTHI 743

Query: 851 STTIRNLRLSCCVAGHIKVTDAGEDIQETMD----VLVENGLDP 890
             +I  +R+ C     +   D  ++I E M+    + +E G +P
Sbjct: 744 LKSINRMRMFCAHGLDMFSEDDRKEIAEGMNPENAIAIELGDEP 787



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 7/152 (4%)

Query: 965  YRQWSNTNTFLKQDLYRPNLESNKALPD-----KVIIFSQFLEHIHVIEQQLTVAGIKFA 1019
            Y   S   T L +DL +   E+++ LP+     + ++FS +  ++ +IE  L   GI + 
Sbjct: 934  YSGPSTKVTALMEDLEKCAAETSQ-LPEGEPPIRSVVFSGWTMYLDLIEIALNERGIGYN 992

Query: 1020 GMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQ 1078
             +   M  S + + L+ F+ D     +L+   +   GL+ +   +VF+MEP W+  +E+Q
Sbjct: 993  RLDGKMSVSQRSRVLEQFKTDPGITVILVSIKAGGQGLNFTAANKVFMMEPQWNPGVEQQ 1052

Query: 1079 VISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             I R HR+G  R + ++   M  TVE  +L+ 
Sbjct: 1053 AIDRVHRLGQKRDVQIKRYIMENTVENAVLQL 1084


>gi|390597526|gb|EIN06926.1| hypothetical protein PUNSTDRAFT_90645 [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 760

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 135/581 (23%), Positives = 223/581 (38%), Gaps = 124/581 (21%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTFN 669
            S  TLIV P  LV  W  +++++         +  +H  PS      +   + VV+TT+ 
Sbjct: 186  SPTTLIVCPVALVTQWVAEVKKYAPE-----LLVKEHHGPSRTKDPRELTSHHVVVTTYQ 240

Query: 670  RLSAEW--------------GRRKKSP--------------------------------- 682
             L++E+              G+ KK                                   
Sbjct: 241  VLASEYASHGTGAKDESAKSGKAKKQSVSSDDSSSADSDDSSAFGRSLAKKKAKPKAKAV 300

Query: 683  ---MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHL 739
               +  V W RV+LDEGHT+ +    T   Q   +L A  RW+LTGTP  N     +  L
Sbjct: 301  KAALFDVKWFRVVLDEGHTIKN--RNTKAAQACCALEAKFRWVLTGTPMQNN----VEEL 354

Query: 740  QPMLKFLHEEAYGQNQKAWD---GGILRPFEAEMEEGRSRLLQLLHRCMISAR-KTD--- 792
              + KFL           WD     I +P ++       + LQ++ R ++  R KTD   
Sbjct: 355  YSLFKFLGIRPLND----WDHFNTHINKPVKSGKSARAMKRLQIVLRAIMLRRLKTDLIN 410

Query: 793  ---LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKF 849
               L  +P    E+    F  +    Y  +   V      A  N   +   ++  K +  
Sbjct: 411  GKPLVELPPRTVEIVSCLFDNDERLFYESIQSKVE-----AQMNKLQNAGVIM--KNYTT 463

Query: 850  RSTTIRNLRLSC----CVAGHIKVTDAG--------EDIQETMDVLVENGLDPLSQEYAF 897
                +  LR +C     V+   KV  A         ++++E  +  +      L  E A 
Sbjct: 464  VLILLLRLRQACNHPALVSKDFKVDSAALESRPAKNQNLEEEQEDELAGMFSKLGVEEAK 523

Query: 898  IKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQD 957
            I+   +    C   +   +  + +S+ C    C    E Q+     R    NP  P    
Sbjct: 524  IRKCTI----CFETLDDDNSASKESQNCL--DCEAQIERQA----RRRSVTNPDLPA--- 570

Query: 958  LIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIK 1017
                       S+T      DL +  +++     +K I+FSQF   + +++  L  AGI+
Sbjct: 571  -----------SSTKIRRILDLLQ-EIQNRGDGDEKTIVFSQFTSMLDLLQPFLKDAGIR 618

Query: 1018 FAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSME 1076
                   M    +  +L   R   S   +L+   A S GL+L+    V L++  W+ ++E
Sbjct: 619  HVRYDGSMSKPERDLALTKIRTSDSVKVILISFKAGSTGLNLTSCNNVILVDLWWNPALE 678

Query: 1077 EQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRC 1117
            +Q   RAHRMG TRP+++  L +  TVE+++L  LQ+  R 
Sbjct: 679  DQAFDRAHRMGQTRPVNIYKLCVPETVEDRILA-LQEQKRV 718


>gi|116623003|ref|YP_825159.1| SNF2-like protein [Candidatus Solibacter usitatus Ellin6076]
 gi|116226165|gb|ABJ84874.1| SNF2-related protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 1073

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 4/125 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQF   + ++  +L  AG+++   Y    + ++   +D F++D  C   L+   +
Sbjct: 925  KALVFSQFTSLLAIVRDRLDAAGVRYE--YLDGSTRDRQARVDTFQNDPQCTLFLISLKA 982

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              LGL+L+    VFL++P W+ ++E Q + RAHR+G TRP+    L  R TVEE++LE L
Sbjct: 983  GGLGLNLTAAEYVFLLDPWWNPAVEAQAVDRAHRIGQTRPVFAYRLIARDTVEEKVLE-L 1041

Query: 1112 QDTDR 1116
            Q T R
Sbjct: 1042 QKTKR 1046


>gi|357471341|ref|XP_003605955.1| DNA repair protein RAD5 [Medicago truncatula]
 gi|355507010|gb|AES88152.1| DNA repair protein RAD5 [Medicago truncatula]
          Length = 935

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 114/504 (22%), Positives = 195/504 (38%), Gaps = 121/504 (24%)

Query: 680  KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHL 739
            KS +  V W R++LDE H + S    +N  +  ++L +  +W L+GTP  N    ++  L
Sbjct: 447  KSFLHAVKWQRIILDEAHFIKS--RHSNTAKAVLALESFYKWALSGTPLQN----RVGEL 500

Query: 740  QPMLKFLHEEAYGQN--------------QKA--------------WDGGILRPFEAEM- 770
              +++FL    Y  N               K               W+  I  P ++   
Sbjct: 501  YSLVRFLQIVPYSYNLCKDCDCRTLDHSSSKVCSNCSHSSVRHFCWWNKNIATPIQSSGY 560

Query: 771  -EEGRSRLLQLLHRCMIS--------ARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVV 821
             ++G+  ++ L ++ + S         R  DL   P                      +V
Sbjct: 561  GDDGKRAMILLKNKLLKSIVLRRTKIGRAADLALPPR---------------------IV 599

Query: 822  TVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRN---------------LRLSC----- 861
            ++RR+ L  D  +  + ESL N  Q +F +    N               LR +      
Sbjct: 600  SLRRDSL--DIKEQDYYESLYNESQAQFNTYVEENTLTNNYAHIFDLLTRLRQAVDHPYL 657

Query: 862  CVAGHIKVTDAGEDIQETMDVLVENGL------DPL--SQEYAFIKYNLLNGGNCLRHIL 913
             V         G ++    DV  E G+      DP+  S E+ F K  L++    L  I 
Sbjct: 658  VVYSPTAAARQGGNLASNGDVEQECGICHDTVEDPVVTSCEHTFCKGCLIDFSASLGQIS 717

Query: 914  CLDC-----VAMDSEK-CSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQ 967
            C  C     V + S K   +     +   +S  IL R                +Q    Q
Sbjct: 718  CPSCSKLLTVDLTSNKDAVVDKTTTIKGFRSSSILNR----------------IQIENFQ 761

Query: 968  WSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHS 1027
             S     L++++ R  +E + +   K I+FSQF   + +I   L  +G+    +   M  
Sbjct: 762  TSTKIEALREEI-RFMVERDGSA--KAIVFSQFTSFLDLINYSLQKSGVSCVQLVGSMTL 818

Query: 1028 SNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRM 1086
            + +  ++  F  D  C   LM   A  + L+L+  + VFLM+P W+ ++E Q   R HR+
Sbjct: 819  TARDNAIKKFTDDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRI 878

Query: 1087 GATRPIHVETLAMRGTVEEQMLEF 1110
            G  +PI +    +  T+EE++L+ 
Sbjct: 879  GQYKPIRIVRFVIENTIEERILKL 902


>gi|134115669|ref|XP_773548.1| hypothetical protein CNBI1620 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256174|gb|EAL18901.1| hypothetical protein CNBI1620 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 899

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 26/222 (11%)

Query: 589 NLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD 648
            L   L  + L L    D V   +S++TLIV P  ++ +W+ QI+ HV P QL  + +  
Sbjct: 314 GLGKTLTTISLVLATKNDPVGDKVSKSTLIVCPLSVLSNWEKQIRDHVAPSQLTFYTYHG 373

Query: 649 HKKPSAHSLAWDYDVVITTFNRLSAE-----------------WGRRKKSPMMQVHWLRV 691
             K         YD+V+TT+  ++ E                     K  P+  + W RV
Sbjct: 374 AAKGLTAKKLGGYDIVLTTYQTVAGEDAAVPHTGDTPLAKKSRPSTTKSGPLATIKWKRV 433

Query: 692 MLDEGHTLGSSLNLTNKLQMAIS-LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEA 750
           + DEGH L    N   K+ +A + L+A  RW+ TGTP  N+PN     L  +L  LH  A
Sbjct: 434 VADEGHQLK---NPKAKMTIAFANLSAERRWICTGTPIVNSPND----LGSLLTCLHICA 486

Query: 751 YGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
              N + +   +LRP  +  +   S+LLQ +   ++  R  D
Sbjct: 487 PLSNPQYFRALLLRPL-SRGDPTASKLLQAVVSQILLRRTKD 527



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 11/154 (7%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH--------DASC 1043
            DK ++FSQF   +  +  +L   G+KF      M    + + +  F+         +A  
Sbjct: 735  DKTLVFSQFTSFLDCVGVRLEQEGVKFVRFDGRMPGKQRTEVIKAFQEPVKGDDDEEAPT 794

Query: 1044 LALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTV 1103
            + L+   S ++GL+L+  + VFL +P W  ++E Q I RAHRMG  + + V  L    T+
Sbjct: 795  VMLISLKSGAVGLNLTAASNVFLCDPWWQSAIEAQAIDRAHRMGQKKVVRVFQLIAEDTI 854

Query: 1104 EEQMLEFLQDTDRCRRLLKEELVKPEREGARSHR 1137
            E ++L+  +  D    ++ +   K  +E  R+ +
Sbjct: 855  ESRVLDIQKRKD---AMVAKAFEKSSKESQRTKK 885



 Score = 45.1 bits (105), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 21/95 (22%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSG--------DIATGT- 217
           L PHQ  A++WM+ RE N ++ + P      +E    F+V             ++AT T 
Sbjct: 244 LLPHQSQALQWMITRE-NPQLPKSP------SEPAVQFWVKQKGVGSKPDYWLNVATKTP 296

Query: 218 ---APTMRDFHGGMFCDEPGLGKTITALSLILKTQ 249
              AP +    GG+  D  GLGKT+T +SL+L T+
Sbjct: 297 QSEAPQL--GRGGIIADGMGLGKTLTTISLVLATK 329


>gi|361130967|gb|EHL02697.1| putative Uncharacterized ATP-dependent helicase C23E6.02 [Glarea
            lozoyensis 74030]
          Length = 590

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 80/141 (56%), Gaps = 6/141 (4%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +KV+IF +     + I + L + GIK       +    +   +  F  D  C  L+MD S
Sbjct: 402  EKVLIFYESNNVAYYIGEALELLGIKHLFFAKTLKIKQRADHIVEFNADPECKVLIMDVS 461

Query: 1052 -ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             A+ GLDLS  +RV+ + PI +  +E Q + RAHR+G ++P++VETL ++G++EE +L  
Sbjct: 462  QAAFGLDLSSASRVYFINPILNPQIEAQAVKRAHRIGQSKPVYVETLVLKGSIEELILTR 521

Query: 1111 LQDTD-----RCRRLLKEELV 1126
             +D       +C+ +L ++++
Sbjct: 522  RKDMSPEEHKKCKSILDDDII 542


>gi|391863665|gb|EIT72969.1| helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box
            superfamily [Aspergillus oryzae 3.042]
          Length = 928

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 5/152 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            KV+IFSQF   + +IE  L   G  F      M  +++  +   F  + +CL LL+   A
Sbjct: 754  KVVIFSQFTSMLDLIEIPLARHGWAFRRYDGTMKPADRHAATVHFATNPNCLILLVSMKA 813

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
            S  GL+L+  ++V +++P W+  +E+Q I R HR+G  RP+HV  + +  TVE+++L+F 
Sbjct: 814  SNSGLNLTAASQVIILDPFWNPYVEDQAIGRVHRIGQRRPVHVHRILVSNTVEDRILDF- 872

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHRTLHDFA 1143
               DR R+L+ E +V     G  S     DFA
Sbjct: 873  --QDRKRQLI-EGIVDHRTHGEPSRLESTDFA 901



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 122/303 (40%), Gaps = 63/303 (20%)

Query: 589 NLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVR--PGQLHLFVW 646
            L   + AL L    P   +  +   ATL+V P+ L+  WK  I+Q +R  P +  ++V 
Sbjct: 264 GLGKTVQALALIATHPAQHINRH---ATLVVTPASLIQQWKHGIEQFLRSSPHRQRVYV- 319

Query: 647 TDHKKPSAHSLAWDYDVVITTFNRLSAEW-------------GRRKKSPMMQVH--WLRV 691
                         YD+V+T F  ++AE              G  + SP+ +    W RV
Sbjct: 320 --------------YDIVLTMFGTITAELRRTGPRQHARNLAGPHRSSPLFRPASGWHRV 365

Query: 692 MLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAY 751
           +LDE   + +  + T       +L A+ RW L+GTP  N     L  L  +LKFL  + Y
Sbjct: 366 ILDEAQCIKNDQSQTAA--ACCALDATYRWCLSGTPVMNN----LRELYSLLKFLPVQPY 419

Query: 752 GQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCM--ISARKTDLQTI--------PLCIK 801
              Q ++     +P +      R+     L R M  I  R+T   TI        P+   
Sbjct: 420 ASRQ-SFATAFQQPLQTRGSPQRAAATARLRRLMDTIMLRRTKTSTIQGQPILQLPVQTT 478

Query: 802 EVTFLNFTEEHAGTYNELVVTVRR--NILMADWNDPSHVESLLNPKQWKFRSTTIRNLRL 859
           E+ ++ FTE     Y  L    R   N  ++  N   +V  +L           ++ LR 
Sbjct: 479 EIVYVTFTEPERELYTALEYHTRLQFNHYLSGGNPSRNVSHILG---------LLQRLRQ 529

Query: 860 SCC 862
           +CC
Sbjct: 530 ACC 532


>gi|302813585|ref|XP_002988478.1| hypothetical protein SELMODRAFT_128101 [Selaginella moellendorffii]
 gi|300143880|gb|EFJ10568.1| hypothetical protein SELMODRAFT_128101 [Selaginella moellendorffii]
          Length = 562

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 74/126 (58%), Gaps = 1/126 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K +IFSQ+   + +IE QL  AGI+F+ +   M +  ++ ++  F  D     +L+   
Sbjct: 405  EKSLIFSQWTSMLDLIEPQLEEAGIQFSRIDGSMSTRKRVAAIKRFSEDPEVAVMLISLR 464

Query: 1052 AS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A   GL+L   TRV LM+  W+ + E+Q I R HR+G TRP+HV    ++ TVEE++L+ 
Sbjct: 465  AGGCGLNLVAATRVLLMDMWWNPTTEDQAIDRTHRIGQTRPVHVTRFVVKETVEERILQI 524

Query: 1111 LQDTDR 1116
             ++  +
Sbjct: 525  QEEKKK 530



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 33/215 (15%)

Query: 585 KTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHL 643
           KTL  +A  L A   ++ +   S ++ +   TLIV P  ++  W+++I   V     L  
Sbjct: 67  KTLSAIALILEASPRSMAQDHASQKI-VRGGTLIVCPVSVIRQWESEIATKVAASAPLST 125

Query: 644 FVWTDHKKPSAHSLAWDYDVVITT---------------FNRLSAEWGRRKK---SPMMQ 685
           FV+ D +K +   LA  YDVVITT               FNR  A W   ++    P+  
Sbjct: 126 FVYHDKRKVTPEMLAL-YDVVITTYGVLAKEKCNKVNKVFNRRRAAWIVERQYLSGPLGN 184

Query: 686 VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKF 745
           V W RV+LDE  ++ ++    ++  M   L+A+ RW L+GTP  N     +  L     F
Sbjct: 185 VEWHRVVLDEAQSIRNAYTQVSRSCM--HLSATYRWALSGTPFQNN----IKDLYGFFCF 238

Query: 746 LHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           L    Y  N+KA+D       + E+ E R   LQL
Sbjct: 239 LRVHPYCHNRKAFDE------QYEVYEKRGYSLQL 267


>gi|154305729|ref|XP_001553266.1| hypothetical protein BC1G_07679 [Botryotinia fuckeliana B05.10]
          Length = 537

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 18/220 (8%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S+ATL++VP  L+  W+ Q + H+ P  L  +++  H K S   L   +DVVITT++ ++
Sbjct: 123 SKATLLIVPPALIQVWEHQFRLHLVPRALACYIYHGHNKKSIDFLR-QFDVVITTYHTIA 181

Query: 673 AEW----GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTP 727
           A W      +    +  + W R++LDE H +    N  ++L  A  +L A+ RW +TGTP
Sbjct: 182 AIWKHHSAHQDDESLYSLTWHRIVLDEAHIIK---NPQSQLARACCALKATRRWAITGTP 238

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME---EGRSRLLQLLHRC 784
             N    +L     ++KFL    Y  + K +   I  PF+       +G  RL  L+   
Sbjct: 239 IQN----KLVDFASIVKFLRVHPYS-DTKTFGEEITTPFKNSSSIDAKGFLRLKTLVRAI 293

Query: 785 MISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
            IS  KT ++ +P  + E+  L+FT      Y    V  R
Sbjct: 294 TISRTKTVIE-LPSRVDEIHHLHFTPAEREKYEAEKVRAR 332



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 1/98 (1%)

Query: 1014 AGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS-ASLGLDLSFVTRVFLMEPIWD 1072
            +GI++  +   M  S + ++L  F+++ +   +L+  +    GLDL+  +R +L+EP W+
Sbjct: 405  SGIRYTRIDGTMPLSRRNEALGAFKNEDTVRVILVSVTCGGAGLDLTTGSRAYLLEPHWN 464

Query: 1073 RSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +EEQ + R HR+   R +      M  + EEQ++E 
Sbjct: 465  PMIEEQALCRVHRISQKRKVTTIRYLMHNSFEEQIVEL 502



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 199 EDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTL 252
           E   + YVN V+G  +T  AP   +F GG+  D+ GLGKT++ +SL+   Q  L
Sbjct: 53  ETSLFSYVNNVTG-CSTCEAPP--EFRGGLLADDMGLGKTLSMISLVASNQACL 103


>gi|348664992|gb|EGZ04828.1| hypothetical protein PHYSODRAFT_566639 [Phytophthora sojae]
          Length = 745

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K IIFSQF+  + +I+ +L + GIK   +   M  + + +++  FR D +  A L+   A
Sbjct: 594  KAIIFSQFVNMLDIIQHRLQLGGIKCVKLSGNMTMAVRDRTIKSFRDDPTVTAFLISLKA 653

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              + L+L+  + +FLM+P W+ + E Q I R HR+G  +PI      + GTVEE++L+ L
Sbjct: 654  GGVALNLTVASHIFLMDPWWNPAAENQAIDRTHRLGQFKPIQATRFIIAGTVEERILK-L 712

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 713  QEKKR 717



 Score = 45.1 bits (105), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TL+V P   V  WK++I++ V PG L +++   +K+  +      YD+V+TT++ + +E
Sbjct: 82  GTLVVCPLVAVMQWKSEIERFVEPGHLSVYIHHGNKRLDSIEKIASYDIVLTTYSIIESE 141



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 678 RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLS 737
           + KSP+ Q+ W R++LDE H +       N       L ++ +W L+GTP  N    ++ 
Sbjct: 239 KGKSPLHQIDWTRIVLDEAHYIKD--RNCNTACGVFELKSTYKWCLSGTPLQN----RIG 292

Query: 738 HLQPMLKFLHEEAYG 752
            L  +++FL  + Y 
Sbjct: 293 ELFSLVRFLQVKKYA 307


>gi|327295284|ref|XP_003232337.1| SNF2 family helicase [Trichophyton rubrum CBS 118892]
 gi|326465509|gb|EGD90962.1| SNF2 family helicase [Trichophyton rubrum CBS 118892]
          Length = 1167

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 1/118 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +       I + L + G  F      + +S K + L  F    S   LLMD  
Sbjct: 888  EKIIIFYESENTAFWIAEGLELVGTDFRIYAHTLKASQKSEYLSTFNEGESVRVLLMDLR 947

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             AS GL ++  +RVF++ PIWD ++E Q I RAHR+  TRP++VETL ++ T+E++ML
Sbjct: 948  QASHGLHIASASRVFIVNPIWDPNIESQAIKRAHRISQTRPVYVETLVLKDTLEDKML 1005



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 146/368 (39%), Gaps = 67/368 (18%)

Query: 607 SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVIT 666
           SV + L+  TLI+VP  LVDHW  +I  H     + +   +  K P A  L   YD+V+ 
Sbjct: 383 SVTVQLTSGTLIIVPPNLVDHWLNEIAIHTEGLNVLVLRDSSAKTPPASDL-LKYDIVLF 441

Query: 667 TFNRLSAEWGRRKKS------PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
           +  R   E G    S      P+  +HWLR+++DEGH   SS   TN + M   L    R
Sbjct: 442 SQPRFKKESGVYTGSGPTYISPLRYLHWLRIIVDEGHNFASSGGKTNSVYMLDKLQVERR 501

Query: 721 WLLTGTPTPNTPNSQ--LSHLQPMLKFLHEEAYGQNQKAWD--GGILRPFEAEMEEGRSR 776
           W+++G P+      +  L+  Q +     EE  G   KA    G IL      ++  RS 
Sbjct: 502 WIVSGIPSKGLYGVEVTLAAEQSLNSTSEEEKIGGILKARRHAGNILNDEVKRLDSLRSM 561

Query: 777 LLQLLH---------------------------RCMISARKTDLQT-------------- 795
           ++  L+                           R M  + +  LQ+              
Sbjct: 562 VIDFLNLKPWANTRAADSASWTIYMTPIGPDGRRAMSPSLRATLQSLVVRHRSEDLHREL 621

Query: 796 -IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTI 854
            +P    EV +L  T     + N  ++ +  N + ++     +   L +PK  K  S  +
Sbjct: 622 PLPSLYNEVVYLEPTCYDKASLNLFILRIVINAITSERTGDDY---LFHPKNRKHLSQLM 678

Query: 855 RNLRLSCC--------VAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGG 906
            NLRL+             ++ +  A + +Q+ +D +    L+ L Q  +  +  L   G
Sbjct: 679 NNLRLAGFWWPGAETEEVRNVTLRVAKDYLQKNIDRMAGEELNLLYQAISIGEKIL---G 735

Query: 907 NCLRHILC 914
              R++LC
Sbjct: 736 FTTRNVLC 743


>gi|409051826|gb|EKM61302.1| hypothetical protein PHACADRAFT_247815 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 903

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 69/117 (58%), Gaps = 1/117 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  IE  L  A IK+  +   M    + ++++  +HD +C  LL+   +
Sbjct: 750  KTVVFSQWTSMLDKIEDALEAANIKYDRLDGTMKREERTRAMEALKHDPACEVLLVSLKA 809

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +GL+L+   RV+LM+P W+ ++E Q + R HR+G TRP+    L +  ++E+++L
Sbjct: 810  GGVGLNLTAAQRVYLMDPYWNPAVENQAVDRIHRLGQTRPVTTVKLIIEKSIEDRLL 866



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 16/147 (10%)

Query: 681 SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
           SP+  V+WLRV+LDE H++     +    +    L A  R  LTGTP  N    +L  + 
Sbjct: 340 SPLQSVYWLRVVLDEAHSIKEVSTVA--CRACCDLIADRRLCLTGTPVQN----KLDDVY 393

Query: 741 PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQT----- 795
            +LKFL  E + + +  W   I  P +     G +R LQ + RC+   R  + +      
Sbjct: 394 ALLKFLRLEPFDE-KAVWTEYIGSPVKYGQVLGVAR-LQSIMRCVTLRRTKESKAENGQK 451

Query: 796 ---IPLCIKEVTFLNFTEEHAGTYNEL 819
              +P    E+ FL F E     Y++ 
Sbjct: 452 ILDLPPRRDELRFLKFDEHEQSIYDQF 478


>gi|50557268|ref|XP_506042.1| YALI0F30261p [Yarrowia lipolytica]
 gi|49651912|emb|CAG78855.1| YALI0F30261p [Yarrowia lipolytica CLIB122]
          Length = 1353

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 7/149 (4%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K IIFSQF+  +++I  +L  AG ++      MH+  + +++  FR D S   LL+   
Sbjct: 1183 EKTIIFSQFVSFMNLIGDELDNAGFEYLRYEGSMHADERSRAVTAFREDPSISVLLISLK 1242

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + ++GL L+    V +M+P W+  +EEQ + RAHR+G  R + V  + +  TVE+++LE 
Sbjct: 1243 AGNVGLTLTAANHVIIMDPFWNPYVEEQAMDRAHRIGQQRDVTVHKIVIEQTVEDRILEL 1302

Query: 1111 LQDTDRCRRLLKEELVKP--EREGARSHR 1137
                 + +R + E  + P  +R+ AR  R
Sbjct: 1303 ----QKRKREMIESALDPSGQRQMARLSR 1327



 Score = 47.8 bits (112), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 57/272 (20%), Positives = 98/272 (36%), Gaps = 69/272 (25%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD----YDVVITTF 668
           ++ TLI+ P  L+  W  +   H++P      +             W+    +DVV+ +F
Sbjct: 440 AKCTLIIAPVGLLHMWSNEFDTHMKPDHRPRTLLYHGPSTKKQYNTWEKLSEFDVVLVSF 499

Query: 669 NRLSAEWGRRKKSPMMQV-----------------------------------HWLRVML 693
             L  E  +   S  ++V                                   ++ R+++
Sbjct: 500 QTLVTEHKKMFFSSGLKVTENIRGPDGRMHRHRRAMRPEEFQSVSSPFYEGDAYFYRIII 559

Query: 694 DEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL------- 746
           DE H++ +    + K      L A  RW LTGTP  NT    +  LQ ++KFL       
Sbjct: 560 DEAHSIKNRNTASAK--ACYKLDAVYRWCLTGTPMQNT----VEDLQSLVKFLRIKPYDK 613

Query: 747 -----HEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD------LQT 795
                H  A G  + A  G  +R      ++   RL  LL   M+   K        +  
Sbjct: 614 EKSFNHHIASGIKKAAISGKAVR------DDSMKRLQSLLAMIMLRRGKDSKINGAPILN 667

Query: 796 IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI 827
           +P    E   ++F+E+    Y +L    +R +
Sbjct: 668 LPPKTVETDAIDFSEDERKFYQDLETGAQRRV 699


>gi|299751451|ref|XP_001830276.2| hypothetical protein CC1G_01912 [Coprinopsis cinerea okayama7#130]
 gi|298409380|gb|EAU91423.2| hypothetical protein CC1G_01912 [Coprinopsis cinerea okayama7#130]
          Length = 1032

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 21/202 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            +R+TLIV P  ++ +W+ QI  H  PG L  +++  + +  +      YDVVITT+  +
Sbjct: 512 FARSTLIVAPLSILSNWEKQIADHCVPGALTSYIYYGNNRNISTDDLKKYDVVITTYQTI 571

Query: 672 SAEWG--------RRKK---SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASN 719
           + E          +RKK     + ++ W R++LDEGH +    N   K+  A + LTA  
Sbjct: 572 TGEHAESAPTSGTKRKKVGERALFEISWKRIILDEGHVI---RNPKTKMARAVVGLTADR 628

Query: 720 RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ 779
           RW+L+GTP  N+P      L  ML FL       N+  +   ++RP +    EG   L  
Sbjct: 629 RWVLSGTPIINSPRD----LGSMLTFLRICQPLDNEDFFKRLLIRPLKNGDPEGAELLKA 684

Query: 780 LL-HRCMISARK-TDLQTIPLC 799
           L+ H C+   ++  D   +PL 
Sbjct: 685 LMSHVCIRRTKEMQDANGVPLI 706



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 9/116 (7%)

Query: 1034 LDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPI 1092
            LD  R +++   +L+   + +LGL+L+    V+LM+P W   +E Q + R +R+G  +P+
Sbjct: 899  LDTGRDESNPRVMLISLKAGALGLNLTVANHVYLMDPWWQEGIESQAVDRVNRIGQKKPV 958

Query: 1093 HVETLAMRGTVEEQMLEFLQDTDRCRRLLKEEL--VKPEREGARSHRT--LHDFAE 1144
            HV  L    TVE ++LE     DR ++L+K+    +K  RE  R  R   L D  E
Sbjct: 959  HVYQLIAENTVESKVLEI---QDRKKQLVKQAFSGIK-SRETQRQQREARLQDLVE 1010


>gi|402085352|gb|EJT80250.1| hypothetical protein GGTG_00253 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 1013

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 111/208 (53%), Gaps = 12/208 (5%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW 675
           TLI+VP  L+D W+ Q+ +HV+PG +   +    +K ++   A  + ++++T++ ++ +W
Sbjct: 475 TLIIVPPPLLDTWQEQLNEHVKPGAMSWGLHYGDQKLTSAEDAAKHHIILSTYHTVALDW 534

Query: 676 GRRK---KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNT 731
           G +    +S +    W R++LDE H +    N  +++  A+ +L A++RW +TGTP  N+
Sbjct: 535 GSKNSTHRSFLFSASWSRIILDEAHMI---RNAKSRMSKAVCALKATSRWAVTGTPVQNS 591

Query: 732 PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
               +  ++ +LKF+    Y  + + +D  I R +++   E  ++ L+ L   ++  R  
Sbjct: 592 ----IRDMESLLKFIRAHPYDDSGR-FDNDIGRLWKSGNVEDAAKRLRTLTNGLVLRRSK 646

Query: 792 DLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
           ++  +P        + F+ E    Y++L
Sbjct: 647 NVIQLPNRTDLKFPVEFSAEERKLYDDL 674



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 11/145 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIK---FAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            K ++FS +   + +I+  L  AG++   F G  +  H    IK    FR D     LL+ 
Sbjct: 861  KSVVFSSWTMTLDLIQAGLERAGMRYERFDGKVAQRHRDGVIK---RFRKDPGVKVLLLT 917

Query: 1050 GS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             S  + GL L+  +  FLMEP W+ ++EEQ ++R HR+G    +      ++ T EE++L
Sbjct: 918  LSCGAAGLTLTEASTAFLMEPHWNPTVEEQALARIHRLGQKSEVKTVRFFVKDTFEERVL 977

Query: 1109 EFLQDTDRCRRLLKEELVKPEREGA 1133
            E  Q     +R L+  LV P+ E  
Sbjct: 978  ELQQS----KRKLEGLLVAPQAEAG 998


>gi|397641178|gb|EJK74515.1| hypothetical protein THAOC_03799 [Thalassiosira oceanica]
          Length = 1329

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 140/341 (41%), Gaps = 70/341 (20%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLF--VWTDHKKPSAHSLA------------ 658
           S++TL+VVP +L++H++ QI  HV  G +     ++    K ++H L+            
Sbjct: 644 SKSTLLVVPDHLLEHFEAQICDHVDFGYISSSQKIYYHSSKRNSHVLSSSDIIYGLNEVP 703

Query: 659 ---W-------------------DYDVVITTFNRL-------SAEWGRRKK--------- 680
              W                    + +V+TT+ R        S E  +R +         
Sbjct: 704 VDRWPAIMFDDGTKQLPEPEVLSRFLLVVTTYQRFTLGFKYGSIEQEKRSQITGRGYFWG 763

Query: 681 ------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
                 S + +V WLR+++DEGH +G   N  N  Q A  + A  RW +TGTPT      
Sbjct: 764 DEMPMPSSLQKVTWLRIIVDEGHVMGKHAN--NMCQFAAWIKADRRWAMTGTPTQQVARQ 821

Query: 735 Q----LSHLQPMLKFLHEEAYGQ---NQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
                L  L  +  F++ + + +    ++ W+  I + +         RL  LL   MI 
Sbjct: 822 HGTAVLKSLFNLTNFVNHDFFSKRLGREQDWNALISQGWRENKLVSFYRLKHLLSFLMIR 881

Query: 788 ARKTDLQ-TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPS--HVESLLNP 844
             K DL+  IP    E + +  + +    YN +V  VR NI+       +    +SLL+ 
Sbjct: 882 HTKGDLEDIIPPPTTEKSLVKLSLQERTAYNTIVCMVRTNIITTSMEGETSGRQDSLLHA 941

Query: 845 KQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVE 885
              K+    + NLR+S C    I  T    +  ET+ +L E
Sbjct: 942 NNAKYAGQALTNLRISSCGGIRILPTITNVNWDETLSMLRE 982



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 58/92 (63%), Gaps = 1/92 (1%)

Query: 1043 CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGT 1102
            C  +L+    S+GLDLSFV+ +F +E  +D+S+++QVI+RA+RMGA  P+HVE +    +
Sbjct: 1205 CFVMLLSKQGSVGLDLSFVSHIFFLESFYDKSVQKQVIARAYRMGALGPVHVEHVMAEES 1264

Query: 1103 VEEQMLEFLQDTDRCRRLLKEELVKPEREGAR 1134
            +EE ++E + + D+     K   +     GAR
Sbjct: 1265 IEE-LMERINEGDQIEDSEKNAKLHKLLNGAR 1295



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 27/163 (16%)

Query: 125 IADDIVISILTR-LGPIDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREW 183
           + ++++I+ LT  L    L  +  + R L     S++P +KL LFPHQ  ++ WM  RE 
Sbjct: 311 LPNEVMITGLTPFLSAKSLHSLRVSSRKLFVSLQSVVPGLKLDLFPHQIRSLSWMEQRER 370

Query: 184 NAEVLRHPLYIDLATEDGFYFYV------------------NTVSGDIATGTA------- 218
           ++ V    +  D       +  V                  N++  D  TG A       
Sbjct: 371 SSVVEEDIIRCDDKLGGNLHRAVTGGASISLNSRRSCDPDSNSIKFDAITGDALCAGAAE 430

Query: 219 -PTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVK 260
             T R   GG+ CD+PGLGK+IT LSLIL++ G   +P  G K
Sbjct: 431 SRTTRCARGGLLCDDPGLGKSITILSLILRSNGLTTEPMGGQK 473


>gi|121707834|ref|XP_001271954.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1]
 gi|119400102|gb|EAW10528.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1]
          Length = 1190

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 1/119 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF         I + L + GI++    S +    +    ++FR++      LMD  
Sbjct: 902  EKIIIFYDSTNSAVWIAEGLDLLGIEYRMYTSTLTPQQRSSYFNLFRYNEEIRVFLMDLN 961

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             AS GL ++  +RVF + P+W  ++E Q I RAHR+G TRP++VETL ++ T+E++ML+
Sbjct: 962  QASHGLHIANASRVFFVNPVWQPNIESQAIKRAHRIGQTRPVYVETLVLKDTLEDRMLK 1020



 Score = 80.9 bits (198), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 14/146 (9%)

Query: 596 ALRLALCEPLDSV-RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA 654
           A R +   P  S+ R+ L+  TLIVVP  LVDHW+ QI +H +  ++ +        P +
Sbjct: 390 ASRTSAAYPRPSLQRVRLTSGTLIVVPPNLVDHWEEQITRHTQGLKVLILRNPTDVTPDS 449

Query: 655 HSLAWDYDVVITTFNRLSAEWGRR----------KKSPMMQVHWLRVMLDEGHTLGSS-- 702
             L   YD+++ + +R   E G+            +SP++++HWLR+++DEGH++  S  
Sbjct: 450 DDL-LQYDILLFSRSRFDQEAGKSVDKKCGPFKPTESPLLKLHWLRIIIDEGHSVAGSSK 508

Query: 703 LNLTNKLQMAISLTASNRWLLTGTPT 728
            N TN   +   L A  RW+++GTP+
Sbjct: 509 SNKTNTGVLLEQLRAERRWIVSGTPS 534


>gi|302895297|ref|XP_003046529.1| SNF2 family DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4]
 gi|256727456|gb|EEU40816.1| SNF2 family DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4]
          Length = 1111

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 1/121 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FS +  H+ +IE  L  AGIKF  +   M  + +  ++D FR D +   +L+  
Sbjct: 954  PYKSVVFSGWTSHLDLIELALNAAGIKFTRLDGSMSRTLRTSAMDKFREDNTVHVILVSI 1013

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  LGL+L+    V++MEP ++ + E Q I R HR+G  RP+      MR + EE+MLE
Sbjct: 1014 MAGGLGLNLTAGNSVYVMEPQYNPAAEAQAIDRVHRLGQKRPVRTVRYIMRDSFEEKMLE 1073

Query: 1110 F 1110
             
Sbjct: 1074 L 1074



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 7/123 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S+ATL+V P   V +W+ QI+QH+RPG L+  ++    +    +    +D+VITT+  +S
Sbjct: 525 SKATLLVCPLSTVTNWEEQIKQHIRPGTLNYHIYHGPNRIKDPARLAGFDLVITTYGSVS 584

Query: 673 AEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            E   R+K      P+ Q+ W R++LDE H +     L  + +    L A  RW +TGTP
Sbjct: 585 NELSSRRKKKDGLYPLEQLGWFRIVLDEAHMIREHSTL--QFKAICRLQADRRWAVTGTP 642

Query: 728 TPN 730
             N
Sbjct: 643 VQN 645


>gi|71024321|ref|XP_762390.1| hypothetical protein UM06243.1 [Ustilago maydis 521]
 gi|46101890|gb|EAK87123.1| hypothetical protein UM06243.1 [Ustilago maydis 521]
          Length = 986

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 9/144 (6%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K I+FSQF   ++++E  L   G K+      M    +  +L+  R DAS   +L+   
Sbjct: 830  EKTIVFSQFTSFLNIVEPHLQRHGFKYVRYDGSMKPQERESALERIRSDASVTVILISFK 889

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S GL+L+  +RV LM+  W+  +EEQ   RAHR+G TR + +  L+++ TVEE++L+ 
Sbjct: 890  AGSTGLNLTSCSRVILMDLWWNPQIEEQAFDRAHRLGQTRDVTIYKLSIKDTVEERILK- 948

Query: 1111 LQDTDRCRRLLKEELVKPEREGAR 1134
            LQ+  R        L K   EG++
Sbjct: 949  LQEKKRA-------LAKAALEGSK 965


>gi|308810895|ref|XP_003082756.1| SNF2 domain-containing protein / helicase domain-containing protein /
            RING finger domain-containing protein (ISS) [Ostreococcus
            tauri]
 gi|116061225|emb|CAL56613.1| SNF2 domain-containing protein / helicase domain-containing protein /
            RING finger domain-containing protein (ISS), partial
            [Ostreococcus tauri]
          Length = 1008

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 6/202 (2%)

Query: 917  CVAMDSEKCSLPGCGFLYEMQ-SPEILTRPENPNPKW---PVPQDLIELQPSYRQW-SNT 971
            C   D +K + P C     +  SPE L   ++   ++   P+P   I  +    Q+ S+T
Sbjct: 776  CAPADGKKVTCPVCRTALTIDFSPESLESAKSAIGRFNKDPLPDKSILNKLDLTQYTSST 835

Query: 972  NTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKI 1031
                  +  R          +K I+FSQ+   I ++E +L  A    A +   M  + + 
Sbjct: 836  KVETLVNALRDMRNQENGQLNKAIVFSQYTAMIEIVEWRLKKAKFTIAKLLGSMPVTQRA 895

Query: 1032 KSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATR 1090
             +L  FR D +   +LM   S   GL+L     V+++EP W+ ++E Q + RAHR+G  R
Sbjct: 896  ANLQAFREDPNVSVILMSLKSGGEGLNLQAANYVYVLEPWWNPAVEMQAVMRAHRIGQHR 955

Query: 1091 PIHVETLAMRGTVEEQMLEFLQ 1112
            P+     + +GT+EE+M+E  +
Sbjct: 956  PVTAVRFSTKGTIEERMMELQE 977


>gi|296421314|ref|XP_002840210.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636424|emb|CAZ84401.1| unnamed protein product [Tuber melanosporum]
          Length = 1119

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 69/117 (58%), Gaps = 1/117 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K++IF +  +    I Q L + G+++ G    + S  K K L  F+   +    LMD S
Sbjct: 837  EKILIFYESEDVAFYIAQGLEIIGVEYLGYQKNLPSHEKAKYLVTFQFSQTFRVFLMDLS 896

Query: 1052 -ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
             A+ GL++S  +R+F + P+W  S+E Q ++RAHR+G  RP++ ETL +  T+E +M
Sbjct: 897  QAAFGLNISAASRIFFVNPVWQPSVEHQALARAHRIGQKRPVYAETLILNHTIEREM 953



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 13/132 (9%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLF--VWTDHKKPSAHSLAWDYDVVIT 666
           R+YL   T++V P  LVD WK +I  HV    L     V +    P    L  +YD+VI 
Sbjct: 322 RIYLGTGTIVVCPPNLVDQWKREINIHVEEKALKTLALVKSSEGIPPVSDL-LEYDLVII 380

Query: 667 TFNRLSAEW--GRRK-------KSPMMQVHWLRVMLDEGHTLGSSLNLTNK-LQMAISLT 716
              R   E   GR K       KSP+M + W R+++DEGH++ SS +L N+ + +A  L 
Sbjct: 381 ARPRFDMEEREGRDKAGRHAVYKSPLMSIRWKRLIVDEGHSMASSSSLMNRGVCVAQRLP 440

Query: 717 ASNRWLLTGTPT 728
              RW+++ TP 
Sbjct: 441 VERRWIVSATPV 452


>gi|302505721|ref|XP_003014567.1| hypothetical protein ARB_07129 [Arthroderma benhamiae CBS 112371]
 gi|291178388|gb|EFE34178.1| hypothetical protein ARB_07129 [Arthroderma benhamiae CBS 112371]
          Length = 921

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 25/216 (11%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           S+ATLI+ P  ++ +W+ QI  H+ +   L +  +    K  A +L+  YDVVITT+  L
Sbjct: 384 SKATLIISPLGVMSNWRDQIAAHIHKEHALRVLTYHGSGKKEAANLS-QYDVVITTYGAL 442

Query: 672 SAEWGR---------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
           ++E+G+         + K  +  V W RV+LDEGHT+ +    T     A  L A +RW 
Sbjct: 443 ASEYGQLLSATGKFAKTKRGLFSVRWRRVVLDEGHTIRTP--KTKAACAACMLEADSRWS 500

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           LTGTP  N     L  L    KF+      ++   +   ++RP  A  +E  S LLQ L 
Sbjct: 501 LTGTPIVNN----LKDLYSQGKFIRLSGGLEDLPVFHSALIRPLNAG-DENASLLLQALM 555

Query: 783 RCMISARKTDLQTIPL-------CIKEVTFLNFTEE 811
             +   R+ D+  + L        I  V FL + +E
Sbjct: 556 ATICLRRRKDMSFVNLRLPPMESHILHVKFLPYEKE 591



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 70/127 (55%), Gaps = 1/127 (0%)

Query: 988  KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALL 1047
            +A   K ++FSQ+   + +IE  L +  I FA +   M+S+ +  ++  F  D+ C  +L
Sbjct: 763  QAAGTKTVVFSQWTSFLDLIEPHLVLYNINFARIDGKMNSAKRDAAMSKFSRDSECTVML 822

Query: 1048 MD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQ 1106
                  S+GL+L    +V L +  W  ++E+Q + R +R+G TRP  +  L M  ++E++
Sbjct: 823  ASLNVCSVGLNLVAANQVVLADSWWAPAIEDQAVDRVYRLGQTRPTTIWRLVMENSIEDR 882

Query: 1107 MLEFLQD 1113
            +L+  ++
Sbjct: 883  VLDIQKE 889



 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 26/119 (21%)

Query: 161 PCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYF-------YVNTVSGDI 213
           P +  +L P+Q+  + WML RE        P      ++D           Y+N ++ + 
Sbjct: 291 PQLSTELLPYQRQGLAWMLDRE-------SPSLPKEGSDDIVQLWKRVGKRYMN-IATNY 342

Query: 214 ATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL---------KTQGTLADPPDGVKIIW 263
           ++ TAP +    GG+  D+ GLGKTI  +SLIL          ++ TL   P GV   W
Sbjct: 343 SSSTAPPLAS--GGILADDMGLGKTIQVISLILANATPKTPKSSKATLIISPLGVMSNW 399


>gi|302767836|ref|XP_002967338.1| hypothetical protein SELMODRAFT_87168 [Selaginella moellendorffii]
 gi|300165329|gb|EFJ31937.1| hypothetical protein SELMODRAFT_87168 [Selaginella moellendorffii]
          Length = 545

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 72/120 (60%), Gaps = 1/120 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K +IFSQ+   +++IE +L  AGI+F+ +   M +  ++ ++  F  D   + +L+   
Sbjct: 389  EKSLIFSQWTSMLNLIEPELEGAGIQFSRIDGSMSAGKRVAAIKRFSEDPDVVVMLISLR 448

Query: 1052 AS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A   GL+L   +RV LM+  W+ + E+Q I R HR+G TRP+HV    ++ TVEE +LE 
Sbjct: 449  AGGCGLNLVAASRVLLMDMWWNPTTEDQAIDRTHRIGQTRPVHVTRFVVKQTVEEHVLEI 508



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 25/162 (15%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDH--KKPSAHSLAWDYDVVITTFNRL 671
            TLIV P  ++  W+ +I+  V     L   V+ D   +K +   LA  YDVVITT+  +
Sbjct: 62  GTLIVCPVSVIRQWEHEIRTKVAASAPLSTLVYHDQGKRKVTLEKLA-SYDVVITTYGVV 120

Query: 672 SAE--------------WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTA 717
           + E              W R +  P+  V W RV+LDE  ++ ++   T+     + L+A
Sbjct: 121 AKERCLNVEVFDTGRVAW-RERSGPLANVKWHRVVLDEAQSIRNA--YTDVSMSCMRLSA 177

Query: 718 SNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWD 759
           + RW L+GTP  N     +  L     FL  + Y  + +A+D
Sbjct: 178 TYRWGLSGTPFQNN----IKDLYAFFCFLRVKPYCSDWRAFD 215


>gi|302794214|ref|XP_002978871.1| hypothetical protein SELMODRAFT_109740 [Selaginella moellendorffii]
 gi|300153189|gb|EFJ19828.1| hypothetical protein SELMODRAFT_109740 [Selaginella moellendorffii]
          Length = 587

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 75/126 (59%), Gaps = 1/126 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K +IFSQ+   + +IE +L  AGI+F+ +   M +  +++++  F  D     +L+   
Sbjct: 430  EKSLIFSQWTSMLDLIEPELEEAGIQFSRIDGSMSTRKRVEAIKRFSEDPEVAVMLISLR 489

Query: 1052 AS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A   GL+L   TRV LM+  W+ + E+Q I R HR+G TRP+HV    ++ TVEE++L+ 
Sbjct: 490  AGGCGLNLVAATRVLLMDMWWNPTTEDQAIDRTHRIGQTRPVHVTRFVVKQTVEERILQI 549

Query: 1111 LQDTDR 1116
             ++  +
Sbjct: 550  QEEKKK 555



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 27/194 (13%)

Query: 585 KTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRP-GQLHL 643
           KTL  +A  L A   ++ +   S +  +   TLIV P  ++  W+++I   V     L  
Sbjct: 67  KTLSAIALILEASPRSMAQDHASQK-KVRGGTLIVCPVSVIRQWESEIATKVAATAPLST 125

Query: 644 FVWTDHKKPSAHSLAWDYDVVITT---------------FNRLSAEWGRRKK---SPMMQ 685
           FV+ D +K +  +LA  YDVVITT               FNR  A W   ++    P+  
Sbjct: 126 FVYHDKRKVTPETLAL-YDVVITTYGVLAKEQCNKVNKVFNRRRAAWIVERQYLSGPLGN 184

Query: 686 VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKF 745
           V W RV+LDE  ++ ++    ++    + L+A+ RW L+GTP  N     +  L     F
Sbjct: 185 VAWHRVVLDEAQSIRNAYTQVSR--SCMHLSATYRWALSGTPFQNN----IKDLYAFFCF 238

Query: 746 LHEEAYGQNQKAWD 759
           L  + Y  N+KA+D
Sbjct: 239 LRVQPYCHNRKAFD 252


>gi|392571082|gb|EIW64254.1| hypothetical protein TRAVEDRAFT_33062 [Trametes versicolor FP-101664
            SS1]
          Length = 1134

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 70/118 (59%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  IE  L +A I++  +   M   ++ +++D  ++D  C  LL+   +
Sbjct: 981  KTVVFSQWTSMLDKIEDALEIANIRYDRLDGTMKRDDRTRAMDALKNDPGCEVLLVSLKA 1040

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RV+LM+P W+ ++E Q + R HR+G TRP+    L +  ++E ++LE
Sbjct: 1041 GGVGLNLTAAQRVYLMDPYWNPAVENQAVDRIHRLGQTRPVTTVKLIIENSIEARLLE 1098



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 22/155 (14%)

Query: 676 GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKL--QMAISLTASNRWLLTGTPTPNTPN 733
           G    SP+  +HW RV+LDE H    S+  TN +  + +  L A  R  LTGTP  N   
Sbjct: 563 GTEATSPLQSIHWFRVVLDEAH----SIKETNTVGCRASCDLAADRRLCLTGTPVQN--- 615

Query: 734 SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT-- 791
            +L  +  ++KFL    +  ++  W+  I  P +     G +R LQ + RC I+ R+T  
Sbjct: 616 -KLDDVYALIKFLRLAPF-DDKNTWNEYIGTPVKFAQPLGVAR-LQTIMRC-ITLRRTKE 671

Query: 792 -------DLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
                   +  +P    E+ +L F ++    Y+  
Sbjct: 672 SRAEDGKKILALPPRRDELRYLKFDKDEQSIYDRF 706


>gi|168025225|ref|XP_001765135.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
           patens]
 gi|162683722|gb|EDQ70130.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
           patens]
          Length = 793

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 95/179 (53%), Gaps = 12/179 (6%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           R TLIV P  ++ +W TQ+++H   G L + ++    +     +   +D+V+TT+N L+ 
Sbjct: 264 RTTLIVCPLSVLSNWVTQLEEHTMLGSLSVCLYHGADRIRDPVVLGQFDIVLTTYNILAT 323

Query: 674 EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
           E G  + SP+ +V+WLR++LDE H + S      + +  ++L A  RW +TGTP  NT  
Sbjct: 324 E-GCSEFSPLQKVNWLRIILDESHLIKSP--SAQQTKAVVALKAERRWAVTGTPIQNTAR 380

Query: 734 SQLSHLQPM-LKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              S +Q + L+ L++ +Y      W   + RP       G +RL  L+    I+ R+T
Sbjct: 381 DLFSLMQFLQLEPLNDSSY------WRRTLERPLTNGDPSGLTRLQALIK--AIALRRT 431



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 76/128 (59%), Gaps = 4/128 (3%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH---DASCLALLM 1048
            +K ++FSQF + ++ +E  L   G +F  +   M S  +  +L  FR    D+  + LL 
Sbjct: 638  EKSVVFSQFSQMLNCLEGPLADVGFRFVRLDGSMTSKKRQAALTAFRSKDPDSPTIFLLS 697

Query: 1049 DGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +A +GL+L   +RV++++P W+ ++EEQ + R HR+G TR + V  L +  T+E+++L
Sbjct: 698  LKAAGVGLNLVAASRVYMVDPWWNPAVEEQAMDRVHRLGQTRDVTVVRLIVTDTIEDRIL 757

Query: 1109 EFLQDTDR 1116
            E LQ+  R
Sbjct: 758  E-LQERKR 764


>gi|449539973|gb|EMD30973.1| hypothetical protein CERSUDRAFT_120235 [Ceriporiopsis subvermispora
           B]
          Length = 1152

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 99/212 (46%), Gaps = 23/212 (10%)

Query: 589 NLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD 648
            L   L  L L L    D + +  S++TLIVVP  ++ +W+ QI+ HV  G L   V+  
Sbjct: 461 GLGKTLTMLALILATKTD-IPIECSQSTLIVVPLSVLSNWEKQIEDHVVDGVLTSCVYYG 519

Query: 649 HKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSP-------------MMQVHWLRVMLDE 695
             +  +      YD+VITT+  ++ E G R                 +  VHW RV+LDE
Sbjct: 520 ASRSMSPDELKKYDIVITTYQTVTKEHGDRSAGSGEPSKKKKKSHKGLFDVHWKRVILDE 579

Query: 696 GHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQN 754
           GH++    N   K+  A+ +L A  RW+LTGTP  N+P      L  +L FL   +   N
Sbjct: 580 GHSI---RNPRTKMAKAVCTLEAQRRWVLTGTPIINSPKD----LGSILTFLRICSPLDN 632

Query: 755 QKAWDGGILRPFEAEMEEGRSRLLQLL-HRCM 785
              +   +LRP +     G   L  L+ H C+
Sbjct: 633 DDFYKRMVLRPLKDGNPSGAELLRALMSHVCI 664



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + +LGL+L+    V+L    W   +E Q I R +R+G T+P+HV  L    TVE ++++ 
Sbjct: 1037 AGALGLNLTVANNVYLW---WQEGIESQAIDRCNRIGQTKPVHVYQLIAENTVEAKVIDI 1093



 Score = 42.7 bits (99), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)

Query: 163 MKLKLFPHQQAAVEWMLHREW----NAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTA 218
           +K+ L  HQ  A++W +  E+      E  +   +  L    G  FY N ++ +    TA
Sbjct: 389 LKVDLLKHQSQALKWCIDHEYPQLPKTEADKPVQFWQLRKAGGKTFYFN-LATNTPQMTA 447

Query: 219 PTMRDFHGGMFCDEPGLGKTITALSLILKTQ 249
           P +    G +  D  GLGKT+T L+LIL T+
Sbjct: 448 PVL--GRGALCADSMGLGKTLTMLALILATK 476


>gi|255956037|ref|XP_002568771.1| Pc21g17740 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590482|emb|CAP96671.1| Pc21g17740 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 968

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 113/219 (51%), Gaps = 18/219 (8%)

Query: 592 FDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHK 650
             + +L LA  +PL++     S+ TLI+ P  ++ +W+ QIQ H  +     + ++    
Sbjct: 400 IQVISLILANAKPLNAGS---SKTTLIIAPVGVMSNWRNQIQDHAHKETAPSVLIYHGSG 456

Query: 651 KPSAHSLAWDYDVVITTFNRLSAEWG-RRKKSP---MMQVHWLRVMLDEGHTLGSSLNLT 706
           K  A +LA  YDVVIT++  L+ ++     K+P   +  +HW RV+LDEGH +    N +
Sbjct: 457 KKEAANLA-KYDVVITSYGALALDFNPNANKAPVKGIFSLHWRRVVLDEGHII---RNPS 512

Query: 707 NKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRP 765
           +K  +A   L A +RW LTGTP  NT    L  L   ++FL      ++   ++  ++RP
Sbjct: 513 SKASLAACGLRADSRWTLTGTPIINT----LKDLYAQVRFLKLSGGLEDLGIFNSVLIRP 568

Query: 766 FEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVT 804
             +   E R  LL+ L   +   R+ D+  I L + E+T
Sbjct: 569 LTSGEPEAR-LLLEALMGTICLRRRKDMGFINLKLPEMT 606



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 4/130 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQ+   + +IE  L   G+KFA +   M S  +  S++ F  D  C  LL   S 
Sbjct: 815  KTVVFSQWTSFLDLIEPHLQQRGVKFARVDGKMQSVKRDNSINSFSSDTQCTILLASLSV 874

Query: 1053 -SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S+GL+L    +V L +  W  ++E+Q + R +R+G  R   V  L M  ++EE++L   
Sbjct: 875  CSVGLNLVAANQVILCDSWWAPAIEDQAVDRVYRLGQKRETTVWRLVMEDSIEERVLAI- 933

Query: 1112 QDTDRCRRLL 1121
               +R RRL+
Sbjct: 934  --QERKRRLM 941


>gi|164658682|ref|XP_001730466.1| hypothetical protein MGL_2262 [Malassezia globosa CBS 7966]
 gi|159104362|gb|EDP43252.1| hypothetical protein MGL_2262 [Malassezia globosa CBS 7966]
          Length = 1014

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 12/166 (7%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHL-FVWTDHKKPSAHSLA-WDYDVVIT 666
           RL  + ATL+V P  L+  W+T++ +  +PG L +   + D ++  A  LA  + DVV+T
Sbjct: 397 RLQRTAATLVVAPMSLLSQWRTELDRASQPGTLSIALYYGDAREQLAQQLAKGEVDVVVT 456

Query: 667 TFNRLSAEW---GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
           ++  L+AE+    +R  S +    W RV+LDE HT+ +   L  +   A  L A  RW L
Sbjct: 457 SYGTLTAEYKHLDKRGTSTLFSGTWHRVILDEAHTIKNRSTLAAR--AACRLEADRRWAL 514

Query: 724 TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE 769
           TGTP  N    +L+ L  +L+FL  E +G + + ++  + +PF ++
Sbjct: 515 TGTPIQN----RLTDLYSLLRFLRVEPWG-DIRFFNSFLAKPFASQ 555



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 18/107 (16%)

Query: 165 LKLFPHQQAAVEWM---------------LHREWNAEVLRHPLYIDLATEDGFYFYVNTV 209
           L+L  +Q+ A+ WM               LH  W  E    PL  D+    G  FY+N  
Sbjct: 268 LELRSYQKQALGWMQSMEDTYYSSRQNTELHPLW--EEYEFPLADDVDCGHG-PFYMNPY 324

Query: 210 SGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPP 256
            G+++    P  R   GG+  DE GLGKTI   SLI   +    D P
Sbjct: 325 IGELSLVFQPASRAARGGILADEMGLGKTIMLASLIHANRSMDLDRP 371


>gi|323508121|emb|CBQ67992.1| related to RAD16-nucleotide excision repair protein [Sporisorium
            reilianum SRZ2]
          Length = 1659

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 6/142 (4%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FSQ+ + +  I++ L + GI++  +   M   ++  +L+ FR D S   LL+  
Sbjct: 1487 PVKSVVFSQWTKMLDRIQKSLNLTGIRYTRLDGTMKRPDRTAALEAFRTDPSIEVLLVSL 1546

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +   GL+L    R +LM+P W+ ++E Q + R HRMG TRP+      MR ++EE ML 
Sbjct: 1547 RAGGTGLNLVSACRAYLMDPYWNPAVENQGLDRVHRMGQTRPVITTKYIMRHSIEENMLR 1606

Query: 1110 FLQDTDRCRRLLKEELVKPERE 1131
              +     R+++  E V  +R+
Sbjct: 1607 LQK-----RKMMLAEKVGNKRQ 1623



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 5/66 (7%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQH-VRPGQLHLFVWTDHKKPSAHSLAW--DYDVVITTFN 669
           SRATLIV P  +V +W+ QI++H  R  +  ++++  H    A ++ W  D+D+V+TT++
Sbjct: 800 SRATLIVCPLSVVSNWEEQIREHWARRKRPSVYIY--HGPSRATNIKWIADHDIVLTTYS 857

Query: 670 RLSAEW 675
            L +E+
Sbjct: 858 TLGSEF 863



 Score = 43.1 bits (100), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 46/248 (18%)

Query: 681  SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
            +P+ ++ W R++LDE H +  +   T + + A +L+A  R  LTGTP  NT N   +   
Sbjct: 941  NPLQRIEWFRIVLDEAHQIKGA--GTWQSRAACNLSAQRRLCLTGTPIQNTINDLFA--- 995

Query: 741  PMLKFLHEEAYGQNQ----------------KAWDGGILRPFEAEMEEGRSRLLQLL--- 781
             ++KFL  + +                    KA + G   P ++        L++ L   
Sbjct: 996  -LVKFLRLDPFTDRAIWNEFCGFRENLHLRTKAKEDG---PIDSANIGHVQILMKFLALR 1051

Query: 782  -HRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI--LMADWNDPSHV 838
              +   +A    L ++P  + +  +L F E     Y  L    + +   +MA     ++ 
Sbjct: 1052 RQKTSKTADGKQLLSLPPKLSKTEYLEFEEAEKARYQALHARYQEDFEEMMAKDTVNNNY 1111

Query: 839  ESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQET---MDVLVENGLDPLSQEY 895
             ++L+          I NLR++C    H  + DA +D +      D+      D LS+E 
Sbjct: 1112 ATILH---------EILNLRMTC---DHPSMVDASKDAKRMGLGADLSEAIKQDGLSRER 1159

Query: 896  AFIKYNLL 903
            A I + L 
Sbjct: 1160 AAILFILF 1167


>gi|302653441|ref|XP_003018547.1| hypothetical protein TRV_07448 [Trichophyton verrucosum HKI 0517]
 gi|291182199|gb|EFE37902.1| hypothetical protein TRV_07448 [Trichophyton verrucosum HKI 0517]
          Length = 1186

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 15/235 (6%)

Query: 585 KTLDNLAFDLAALRLAL---CEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQL 641
           KTL  L+   ++L  A    CE      L  ++ TL+V P   V +W +QI++H++ G L
Sbjct: 574 KTLSILSLVCSSLSDATAWACEKPADPSLINAKTTLLVSPLSAVGNWVSQIKEHIKDGAL 633

Query: 642 HLFVWTDHKKPSAHSLAWDYDVVITTFNRL----SAEWGRRKKSPMMQVHWLRVMLDEGH 697
             +V+    +         YD+VITT+  +    S +  +R  SP+++++  R++LDE H
Sbjct: 634 SYYVFHGPNRTEDPKELARYDIVITTYTTILSDVSGKSSKRGTSPLVRMNMFRIVLDEAH 693

Query: 698 TLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKA 757
            +        + Q    L A  RW +TGTP  N    +L  L  +LKFL    Y +  + 
Sbjct: 694 IIRE--QNAAQSQAIFQLNAQRRWSVTGTPIQN----RLEDLGAVLKFLRLSPYDERGR- 746

Query: 758 WDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEH 812
           +   I+ PF+ E     + L  L+    +  R  D   +P    +   L FTE+ 
Sbjct: 747 FAAHIVSPFKTENPNAITNLRVLVDSFTLR-RVKDRINLPARHDKTVMLTFTEQE 800



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 8/166 (4%)

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDM 1036
            D    N +S+   P K +IFS +  H+ +IE  L   G+  +A +   M    +  S++ 
Sbjct: 1018 DTAEDNKKSSCQPPIKSVIFSAWTSHLDLIEIALEENGLTGYARLDGTMSLKQRNASIET 1077

Query: 1037 FRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            F  D +   LL+  G+  +GL+L+  + V++MEP ++ +   Q + R HR+G TR +   
Sbjct: 1078 FSTDNNVTILLVTIGAGGVGLNLTAGSMVYIMEPQYNPAAIAQAVDRVHRIGQTREVTTI 1137

Query: 1096 TLAMRGTVEEQMLEF------LQDTDRCRRLLKEELVKPEREGARS 1135
               M  ++EE++ E       L D    R++ + EL K   E  RS
Sbjct: 1138 QFIMNDSIEEKITELAKRKQKLADMSLNRKMDRRELQKERLEEYRS 1183


>gi|169852446|ref|XP_001832907.1| hypothetical protein CC1G_10583 [Coprinopsis cinerea okayama7#130]
 gi|116506042|gb|EAU88937.1| hypothetical protein CC1G_10583 [Coprinopsis cinerea okayama7#130]
          Length = 1280

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 31/151 (20%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
           R+YLS ATL+VVP+ L+  W  +I +HV      L + T    PS   LA DYD+++ T+
Sbjct: 422 RMYLSAATLVVVPANLLSQWDREISKHVEAPIRVLILRTTTPVPSVRELASDYDIILMTY 481

Query: 669 NRLSAEWGRRK-----------------------------KSPMMQVHWLRVMLDEGHTL 699
            R +AE  ++                               SP +Q+ W R+++DEGH +
Sbjct: 482 PRFTAESAKKAISKLHSWKLCECPEIPGSRVPDCKCQVQDVSPFLQIRWKRLVIDEGH-V 540

Query: 700 GSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
            +SL  TN    A  L+   RW++TGTPT N
Sbjct: 541 SASLT-TNLTPFAKLLSVERRWVVTGTPTTN 570



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 9/139 (6%)

Query: 992  DKVIIFSQ---FLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM 1048
            +K +IFS     L H+    + + V  ++F    SP      + + +        L  L 
Sbjct: 1055 EKFLIFSDSELTLAHVAEALELIHVRFLRFTTQVSPQIREQLVLTFETSEKYRVFLMELK 1114

Query: 1049 DGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             G+   GL+L   +RV   EP+W   +E Q I R HR+G TRPI V+TLA++GT EE M+
Sbjct: 1115 HGAR--GLNLVSASRVIFCEPVWQADVESQAIKRVHRIGQTRPITVKTLAIKGTHEENMV 1172

Query: 1109 ---EFLQDT-DRCRRLLKE 1123
                 L +T D+  +L++E
Sbjct: 1173 ARRHALHNTHDKLPKLIEE 1191



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           ++ KL+ +Q+ +V  +L RE +   ++ P+Y+ L    G  FY    + +I       + 
Sbjct: 208 LRSKLYRYQRQSVAALLQRELDQRSVKSPVYVPLTDLGGRSFYFQPGTMEILLEKQMVL- 266

Query: 223 DFHGGMFCDEPGLGKTITALSLILKTQGTLADP 255
              GG+ C+E G GKT+  + LIL T   L  P
Sbjct: 267 PCRGGILCEELGTGKTVMIIGLILATLRQLPQP 299


>gi|296813699|ref|XP_002847187.1| ATP-dependent helicase RIS1 [Arthroderma otae CBS 113480]
 gi|238842443|gb|EEQ32105.1| ATP-dependent helicase RIS1 [Arthroderma otae CBS 113480]
          Length = 1044

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 96/190 (50%), Gaps = 20/190 (10%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
           + +S++TL+V P  L+  W+++I+  V R  +L + V+    +         +DVVITT+
Sbjct: 336 VSVSKSTLVVAPLALIKQWESEIETKVERSHRLSVCVYHGAGRTKHRDDLDSFDVVITTY 395

Query: 669 NRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTP 727
             L++E G  K S    VHW R++LDE HT+    N   K   A+ +L +  RW LTGTP
Sbjct: 396 GTLTSEHG--KNSGCFGVHWYRIVLDEAHTIK---NRNAKATQAVYALKSLYRWCLTGTP 450

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHR 783
             N     L  LQ +++FL  + Y +   AW   I RP    M  GR     R LQ+  +
Sbjct: 451 LQNN----LDELQSLIRFLQIKPYDE-LAAWREQITRP----MSNGRGGLALRRLQVYLK 501

Query: 784 CMISARKTDL 793
             +  R  D+
Sbjct: 502 AFMKRRTKDV 511



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 14/210 (6%)

Query: 934  YEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDK 993
            YE  + EI+T  E    +     DL E  PS      T+  ++  +     ES +    K
Sbjct: 776  YEEDATEIVTDEEGGEDE----ADLSESMPSAIHDVQTSAKIRHLMRILKRESGEF---K 828

Query: 994  VIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSA 1052
             I+FS F   +  IE  L   GI +A     M +  +  SL+  R+ +    LL    + 
Sbjct: 829  FIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASLNRLRNSSGTRVLLCSLRAG 888

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
            SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L ++GTVEE++LE   
Sbjct: 889  SLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKVYKLTIKGTVEERILEL-- 946

Query: 1113 DTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
              +R R L K  +   E + A    T+ D 
Sbjct: 947  -QERKRELAKSTI---EGKSAAGKLTMKDM 972


>gi|409082027|gb|EKM82385.1| hypothetical protein AGABI1DRAFT_67996 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 1177

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 34/152 (22%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           +YLS ATL+VVP  L+  W  +I +H       L + +  K PSA +LA +YD+++ T+N
Sbjct: 350 MYLSPATLVVVPPNLLSQWYREISKHCELALRVLVLRSGTKMPSAVALASEYDIILMTYN 409

Query: 670 RLSAEWGRRK------------------------------KSPMMQVHWLRVMLDEGHTL 699
           R +AE   +K                               SP++QV W R+++DEGH  
Sbjct: 410 RYTAEAAHKKISALHSLPPCECPNIPGSRIPDCKCPSPANASPLLQVRWKRLVIDEGHVS 469

Query: 700 GS-SLNLTNKLQMAISLTASNRWLLTGTPTPN 730
            S S NLT   ++   L+   RW++TGTPT N
Sbjct: 470 ASLSTNLTPFTKL---LSVERRWIVTGTPTTN 498



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 5/137 (3%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K++IFS     +  + + L +  IKF    + +    + + +  F    +    LM+  
Sbjct: 946  EKILIFSDSELTLAHVAEALELIQIKFLRFTTQIQPQFREQLVLTFETSETYRVFLMELK 1005

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE- 1109
              + GL+L   +RV   EP+W   +E Q I R HR+G TR I V+TLA+RGT EE M+E 
Sbjct: 1006 HGARGLNLISASRVIFCEPVWQADVESQAIKRVHRIGQTRSITVKTLAIRGTAEETMVER 1065

Query: 1110 ---FLQDTDRCRRLLKE 1123
               F    D+  +LL+E
Sbjct: 1066 RNLFKGSNDKVPKLLEE 1082



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTA---PTMRD 223
           L+ +Q+ ++  M+ RE +   ++ PL + L+T +G  F +   + ++  G     PT   
Sbjct: 137 LYRYQRESIASMVSREIDPRAVQDPLGLPLSTINGKDFDLLPATMEVRNGRGYVDPT--- 193

Query: 224 FHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGV 259
             GG+ C+E G GKT+  L LIL T   L  PPD +
Sbjct: 194 -RGGLLCEELGTGKTVMILGLILSTLKQLPSPPDTI 228


>gi|225681199|gb|EEH19483.1| DNA repair protein RAD5 [Paracoccidioides brasiliensis Pb03]
          Length = 1083

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 20/190 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVW-TDHKKPSAHSLAWDYDVVITTFN 669
           + + TL+V P  L+  W+++I+  V    +L   ++   H+   A+SL+  +DVVITT+ 
Sbjct: 344 VGKGTLVVAPLALIKQWESEIESKVEATHRLRTCIYHGTHRTKYANSLSQ-FDVVITTYG 402

Query: 670 RLSAEWGRRKKSPM--MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            LS+E+   ++ P     ++W RV+LDE HT+ +        Q A SL +  RW LTGTP
Sbjct: 403 TLSSEYATSEEKPTGCFAIYWYRVVLDEAHTIKN--RNAKATQAACSLKSEYRWCLTGTP 460

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHR 783
           T N     L  LQ ++ FL  + Y  +  +W   I +P    +  GR     R LQ+  +
Sbjct: 461 TQNN----LDELQSLINFLRIKPY-NDLASWRDQITKP----LNNGRGGLAIRRLQVYLK 511

Query: 784 CMISARKTDL 793
             +  R  D+
Sbjct: 512 AFMKRRTKDV 521



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L  A I +A     M +  +  SLD  R+      LL    +
Sbjct: 853  KFIVFSFFTSMLTKIEPFLKGANIGYARYDGAMRNDMRENSLDRLRNSPKTRVLLCSLRA 912

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L +R TVEE++++  
Sbjct: 913  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTIDVKVYKLTIRNTVEERIVDLQ 972

Query: 1112 Q 1112
            +
Sbjct: 973  E 973


>gi|119599296|gb|EAW78890.1| SWI/SNF related, matrix associated, actin dependent regulator of
           chromatin, subfamily a, member 3, isoform CRA_b [Homo
           sapiens]
          Length = 793

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 9/179 (5%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           R TLI+ P  ++ +W  Q  QH++    L+ +V+    +    +L    D+V+TT+N L+
Sbjct: 475 RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 534

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
            ++G R  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+ 
Sbjct: 535 HDYGVRD-SPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS- 590

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              L  L  +L FL  + +  +++ W   I RP     E G  RL  L+    +   KT
Sbjct: 591 ---LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT 645



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P + +   +     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL---PPFWEQRND----LYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|212539075|ref|XP_002149693.1| alpha-1,6-mannosyltransferase subunit, putative [Talaromyces
           marneffei ATCC 18224]
 gi|210069435|gb|EEA23526.1| alpha-1,6-mannosyltransferase subunit, putative [Talaromyces
           marneffei ATCC 18224]
          Length = 1874

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 16/210 (7%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTFNRLS 672
           TLIVVP  L+D W+ Q+ QHV PG L    W+ H   +     ++    D+++TT++ +S
Sbjct: 451 TLIVVPPLLLDTWEEQLSQHVVPGSL---AWSRHYGRTRLLDVFELKKLDLILTTYHTIS 507

Query: 673 AEWGRRK---KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP 729
           AEW  RK   +S +    W R++LDE H + +S +   K   A+  TA  RW +TGTP  
Sbjct: 508 AEWKNRKPADQSILFSTPWERLILDEAHFIRNSSSQMAKAICAVPATA--RWAVTGTPIQ 565

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISAR 789
           N    +L  L  + KFL  + YG + K +D  I + +++   +     L+ L R  I  R
Sbjct: 566 N----RLGDLAALFKFLDVDPYG-DIKRFDTDITQLWKSGESKQAVERLKRLSRYFILRR 620

Query: 790 KTDLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
                 +P        +NFT +    Y ++
Sbjct: 621 PKTTINLPTRKDVRCPVNFTPDERILYEDV 650



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 3/131 (2%)

Query: 988  KALPDKV--IIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
            KA P  V  ++FS +   + V+E  L  A I        +    +   +D F+HD S   
Sbjct: 836  KAQPSDVKSVVFSTWRMSLDVVESGLKQAQIPCLRFDGKVPQKERKSVIDKFKHDPSVSV 895

Query: 1046 LLMDGS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            LL+  S  ++GL L+  +  +LMEP W+ ++EEQ ++R HR+G  + +      ++ T E
Sbjct: 896  LLLTLSCGAVGLTLTEASCAYLMEPHWNPTVEEQALARIHRLGQKKEVTTVRFYIKDTFE 955

Query: 1105 EQMLEFLQDTD 1115
            E+++E  +  D
Sbjct: 956  ERVMELQRSKD 966



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 6/94 (6%)

Query: 157 ASIMPCMKLKLFPHQQAAVEWMLHRE--WNAEVLRHPLYIDLATEDGFYFYVNTVSGDIA 214
           AS  P +  +L  HQ+ A+ +ML RE  WN +     L+    T  G  F +N +SGD  
Sbjct: 338 ASQPPEIHTQLERHQKQALSFMLRREQGWNFDSSSGDLWDWKKTSRGRSF-INMISGDHQ 396

Query: 215 TGTAPTMRDFHGGMFCDEPGLGKTITALSLILKT 248
                  + F GG+  D  GLGKT+T ++L+  T
Sbjct: 397 LEEP---KQFFGGIIADPMGLGKTLTMIALVAAT 427


>gi|346975372|gb|EGY18824.1| transcription termination factor 2 [Verticillium dahliae VdLs.17]
          Length = 1121

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 82/146 (56%), Gaps = 5/146 (3%)

Query: 975  LKQDLYRPNLES--NKALPD-KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKI 1031
            L +DL +   E+  N  LP  K ++FS +  H+ +IE  L   GI ++ +   M  + + 
Sbjct: 945  LLEDLLKSEAETAANPTLPPFKSVVFSSWTTHLDLIEMALDSVGITYSRLDGKMSRNART 1004

Query: 1032 KSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATR 1090
            K++D FR + S   +L+   + SLGL+L+    V++MEP ++ + E Q + R HR+G  R
Sbjct: 1005 KAMDEFRDNPSIHVILVSIMAGSLGLNLTSGNNVYVMEPQYNPAAEAQAVDRVHRLGQKR 1064

Query: 1091 PIHVETLAMRGTVEEQMLEFLQDTDR 1116
            P+      MR + EE+M+E LQD  +
Sbjct: 1065 PVQTVRYIMRNSFEEKMIE-LQDKKK 1089



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 7/123 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           ++ TL+V P   + +W+ QI+QH++PG+   +V+    +         YD+VITT+  +S
Sbjct: 538 AKTTLLVCPLTTIFNWEEQIKQHIQPGKFSYYVYHGATRIRDVEQLAQYDLVITTYGSIS 597

Query: 673 AEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            E G R K      PM ++ W R++LDE H +  +   T + +  + L A+ RW +TGTP
Sbjct: 598 TELGLRNKRKPGKYPMEEIGWFRIVLDEAHMIRET--STQQFKAIVRLQANRRWAVTGTP 655

Query: 728 TPN 730
             N
Sbjct: 656 VQN 658


>gi|302509082|ref|XP_003016501.1| hypothetical protein ARB_04790 [Arthroderma benhamiae CBS 112371]
 gi|291180071|gb|EFE35856.1| hypothetical protein ARB_04790 [Arthroderma benhamiae CBS 112371]
          Length = 1187

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 15/235 (6%)

Query: 585 KTLDNLAFDLAALRLAL---CEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQL 641
           KTL  L+   ++L  A    CE      L  ++ TL+V P   V +W +QI++H++ G L
Sbjct: 575 KTLSILSLVCSSLSDATAWACEKPADPSLINAKTTLLVSPLSAVGNWVSQIKEHIKDGAL 634

Query: 642 HLFVWTDHKKPSAHSLAWDYDVVITTFNRL----SAEWGRRKKSPMMQVHWLRVMLDEGH 697
             +V+    +         YD+VITT+  +    S +  +R  SP+++++  R++LDE H
Sbjct: 635 SYYVFHGPNRTEDPKELARYDIVITTYTTILSDVSGKSSKRGTSPLVRMNMFRIVLDEAH 694

Query: 698 TLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKA 757
            +        + Q    L A  RW +TGTP  N    +L  L  +LKFL    Y +  + 
Sbjct: 695 IIRE--QNAAQSQAIFQLNAQRRWSVTGTPIQN----RLEDLGAVLKFLRLSPYDERGR- 747

Query: 758 WDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEH 812
           +   I+ PF+ E     + L  L+    +  R  D   +P    +   L FTE+ 
Sbjct: 748 FASHIVSPFKTENPNAITNLRVLVDSFTLR-RVKDRINLPARHDKTVMLTFTEQE 801



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 8/166 (4%)

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDM 1036
            D    N +S+   P K +IFS +  H+ +IE  L   G+  +  +   M    +  S++ 
Sbjct: 1019 DTAEDNKKSSCQPPIKSVIFSAWTSHLDLIEIALEENGLTGYTRLDGTMSLKQRNASIET 1078

Query: 1037 FRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            F  D +   LL+  G+  +GL+L+  + V++MEP ++ +   Q + R HR+G TR +   
Sbjct: 1079 FSTDDNVTILLVTIGAGGVGLNLTAGSMVYIMEPQYNPAAIAQAVDRVHRIGQTREVTTI 1138

Query: 1096 TLAMRGTVEEQMLEF------LQDTDRCRRLLKEELVKPEREGARS 1135
               M  ++EE++ E       L D    R++ + EL K   E  RS
Sbjct: 1139 QFIMNDSIEEKITELAKRKQKLADMSLNRKMDRRELQKERLEEYRS 1184


>gi|254565729|ref|XP_002489975.1| hypothetical protein [Komagataella pastoris GS115]
 gi|238029771|emb|CAY67694.1| Hypothetical protein PAS_chr1-1_0318 [Komagataella pastoris GS115]
 gi|328350386|emb|CCA36786.1| hypothetical protein PP7435_Chr1-0638 [Komagataella pastoris CBS
           7435]
          Length = 1169

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 27/245 (11%)

Query: 607 SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDV-VI 665
           S +LYLS ATL++VP  L   W T+I +H  P    L  +     P    L    DV +I
Sbjct: 420 SKQLYLSAATLVIVPDNLYRQWITEIDKHFSPNAFELLGFPQGSDPEFPPLEKLLDVDII 479

Query: 666 TTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTG 725
              + + A       S +  ++W R+++DEGH++ S ++  ++L  A SL    +W+++G
Sbjct: 480 LIASSIFARENDSSDSVLRCIYWKRLIVDEGHSMSSKISRPSEL--ARSLYVERKWVISG 537

Query: 726 TPT---------------PNTPNSQLSHLQPML-KFLHEEAYGQNQKAWDGGILRPFEAE 769
           TPT               P      L  L  ++ KFL+   +  + KAW+  ++RPF ++
Sbjct: 538 TPTRGLTRLHVNKEEVQKPFNAKDDLLKLGFLITKFLNVPLWSNDPKAWNQQVVRPFISK 597

Query: 770 MEEGRSRLLQLLHRCMISARKTDLQ---TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRN 826
                 +L Q+L+  M+    T+++    +P  + +V  +       G YN + V +  +
Sbjct: 598 CFNSELQLFQILNSLMVRHSVTEVEDQVDLPPLVHDVVLI-----EPGYYNRISVNLFTS 652

Query: 827 ILMAD 831
           +L  +
Sbjct: 653 LLATN 657



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS- 1051
            K ++F +F +  + + + L + G+K+    S      + ++L  F    S  AL+MD   
Sbjct: 920  KSLVFFEFEDSAYYLSEALDLLGVKYFMYASYKKPIERAENLVKFTEIESGAALIMDLKL 979

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            AS GL +   TRV+ + P+W R +E Q I RAHR+G  + + VETL +RGT+EE+ML+
Sbjct: 980  ASHGLTIIAATRVYFINPVWRRDLEAQAIKRAHRIGQQKEVKVETLILRGTIEEEMLQ 1037


>gi|406604295|emb|CCH44267.1| homocitrate synthase [Wickerhamomyces ciferrii]
          Length = 1646

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 19/167 (11%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS- 1051
            K IIF +F +  + + + L + G+ +    + +    + + +  F        L+MD   
Sbjct: 1351 KSIIFFEFEDSAYYLSEVLDLIGLDYTLYATSVPKDERSEKIKQFTESKGAHTLIMDLKL 1410

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
            AS GL +   T+V+ + P+W RS+E Q I RAHR+G ++P+HVETL ++GT+EE+M +  
Sbjct: 1411 ASHGLTIIAATKVYFLNPVWKRSVEAQAIKRAHRIGQSQPVHVETLILKGTLEEEMYK-- 1468

Query: 1112 QDTDRCRRLLKE-ELVKPEREGARSHRTLHDFAESNYLSHLSFVRTN 1157
                  RRL  E EL  P            D    +Y+S   F++ N
Sbjct: 1469 ------RRLKAEDELNVP---------VADDDHIRDYISKFEFLKAN 1500



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 21/172 (12%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK--KPSAHSLAWDYDVVIT 666
           +  L+ ATLIV P  L   W  +I +H+ PG L+++   +     PS H +   YD+V+ 
Sbjct: 841 KYLLTSATLIVCPDNLFKQWSEEIAKHIEPGFLNVYYTPNIGPLPPSTHLVT--YDIVLM 898

Query: 667 TFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
             +  + E      S + +++W R ++DEGH++    + T  L   I      +W +TGT
Sbjct: 899 PISIYAKE--NLDTSELGRIYWKRFIIDEGHSMNQRNSRTVDLSKNIKF--ERKWAVTGT 954

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL 778
           PT    N  ++           E    N K++D  + R F A+ +  R  LL
Sbjct: 955 PTAGMTNLHMN-----------ETLDNNSKSYD--VKRTFNAKDDLKRLGLL 993


>gi|189201379|ref|XP_001937026.1| hypothetical protein PTRG_06693 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187984125|gb|EDU49613.1| hypothetical protein PTRG_06693 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 909

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 20/216 (9%)

Query: 613 SRATLIVVPSYL-VDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           +++TLI+VPS+L +D W  +I   + PG L  +V+    +  A+ L   +D+V TT+  +
Sbjct: 417 AKSTLILVPSHLLIDTWIDEIHNRITPGGLSYYVFHGSGRKIAYPLLLTHDIVFTTYGTV 476

Query: 672 SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
           +AE+  R +S +  +HW R++LDE H + ++   T +     +L A  RW LTGTP  N+
Sbjct: 477 TAEY-TRNRSLLHHIHWYRIVLDEAHMIRNA--ATKQFGAVNALQALLRWCLTGTPIQNS 533

Query: 732 PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA--- 788
               L  L  +  FL      +N   +   I+ P E + E  RSR      R ++++   
Sbjct: 534 ----LDDLGSLTTFLKVPIL-ENTAQFKRHIVNPIEHKKE--RSRKDHTGLRTLLTSICL 586

Query: 789 RKTDLQTIPLC-IKEVT----FLNFTEEHAGTYNEL 819
           R+T    +PL  + EVT     + FT      Y ++
Sbjct: 587 RRT-TAVLPLSDVTEVTELKRIITFTSSERAQYAQI 621



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 4/119 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF--RHDASCLALLMDG 1050
            K I+FS +   + ++   LTV  + F  +   +  + +   L+ F  R+D S L L+  G
Sbjct: 782  KSIVFSFWKRSLDMVAALLTVNNVSFVRVDGSVPFNKRKAILNDFKCRNDISVL-LMTFG 840

Query: 1051 SASLGLD-LSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            + ++GL+ LS   RV ++ P W+ S+E Q I R  R+G   P+ +    +  TVEE  L
Sbjct: 841  TGAVGLNSLSIANRVHILAPQWNPSVEHQAIGRVVRLGQQNPVTIVRYIVDKTVEEVAL 899


>gi|189198105|ref|XP_001935390.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187981338|gb|EDU47964.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1116

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 2/127 (1%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K I+FS +  H+ +IE  L  AG     +   M   N+ KS+   R D S   +L+  
Sbjct: 961  PIKSIVFSSWTTHLDLIEIALKNAGHTLVRLDGRMTRENRDKSMQALREDPSIRVMLVSI 1020

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            G+  LGL+L+   +VF+MEP ++ + E Q + R HR+G  R + ++   M G+ EE+MLE
Sbjct: 1021 GAGGLGLNLTTANKVFMMEPQFNPAAEAQAVDRVHRLGQDREVTIKRFIMEGSFEEKMLE 1080

Query: 1110 FLQDTDR 1116
             LQ+  R
Sbjct: 1081 -LQNKKR 1086



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 23/256 (8%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLA----WDYDVVITTF 668
           SRATL+V P   + +WK QI++H   G+  L  WT +      S+      ++D+++TT+
Sbjct: 536 SRATLLVCPLSTMTNWKEQIKEHFPMGKSTL-KWTRYHGSERFSMTPEMLANHDIILTTY 594

Query: 669 NRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           + ++ +    KK P+  ++W R++LDE HT+    N TN+ + A  +    RW +TGTP 
Sbjct: 595 HIIAKDL-MDKKRPLPYINWFRIVLDEAHTI---RNATNQSRAACMMMGQRRWAVTGTPV 650

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
            N    +L  L  +  F+    +  N + ++  IL+PF+   +      LQLL   +   
Sbjct: 651 QN----RLEDLGALFNFIKLTPF-DNSQGFNQYILQPFK-NADPMVVDKLQLLVGAVTIR 704

Query: 789 RKTDL--QTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQ 846
           R  ++  + IP  +  V  L F+++    ++      +R +L     D       +  + 
Sbjct: 705 RTKEIIKEEIPKKMDYVVRLKFSKDEQQLHDWFEKDTQRKVLAVTQGDK------IGGQS 758

Query: 847 WKFRSTTIRNLRLSCC 862
           +    T I NLRL C 
Sbjct: 759 YARILTAILNLRLICA 774



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 6/87 (6%)

Query: 161 PCMKLKLFPHQQAAVEWMLHREWN--AEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTA 218
           P +  +L+PHQ+ A+ +M+  E     + +  PL+      +G   YV+ ++G   +  A
Sbjct: 422 PLITTELYPHQKQALHFMVEHEQETIGDDVEDPLWKPHFDNNGRQSYVHRITG---SKVA 478

Query: 219 PTMRDFHGGMFCDEPGLGKTITALSLI 245
              R+  GG+  DE GLGKT++ LSLI
Sbjct: 479 KIQRNL-GGILADEMGLGKTLSILSLI 504


>gi|302413912|ref|XP_003004788.1| transcription termination factor 2 [Verticillium albo-atrum VaMs.102]
 gi|261355857|gb|EEY18285.1| transcription termination factor 2 [Verticillium albo-atrum VaMs.102]
          Length = 868

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 82/146 (56%), Gaps = 5/146 (3%)

Query: 975  LKQDLYRPNLES--NKALPD-KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKI 1031
            L +DL +   E+  N  LP  K ++FS +  H+ +IE  L   GI ++ +   M  + + 
Sbjct: 692  LLEDLLKSEAETAANPTLPPFKSVVFSSWTTHLDLIEMALDSVGITYSRLDGKMSRNART 751

Query: 1032 KSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATR 1090
            K++D FR + S   +L+   + SLGL+L+    V++MEP ++ + E Q + R HR+G  R
Sbjct: 752  KAMDEFRDNPSIHVILVSIMAGSLGLNLTSGNNVYVMEPQYNPAAEAQAVDRVHRLGQKR 811

Query: 1091 PIHVETLAMRGTVEEQMLEFLQDTDR 1116
            P+      MR + EE+M+E LQD  +
Sbjct: 812  PVQTVRYIMRNSFEEKMIE-LQDKKK 836



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 7/123 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           ++ TL+V P   + +W+ QI+QH++PG+   +V+    +         YD+VITT+  +S
Sbjct: 285 AKTTLLVCPLTTIFNWEEQIKQHIQPGKFSYYVYHGATRIRDVEQLAQYDLVITTYGSIS 344

Query: 673 AEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            E G R K      PM ++ W R++LDE H +  +   T + +  + L A+ RW +TGTP
Sbjct: 345 TELGLRNKRKPGKYPMEEIGWFRIVLDEAHMIRET--STQQFKAIVRLQANRRWAVTGTP 402

Query: 728 TPN 730
             N
Sbjct: 403 VQN 405


>gi|358366359|dbj|GAA82980.1| SNF2 family helicase [Aspergillus kawachii IFO 4308]
          Length = 1206

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 1/119 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF         I + L + GI F    S +  + + + L +FR       LLMD  
Sbjct: 905  EKIIIFYDNNNAAFWIAEGLELLGIDFRIYASTLKPTMRAEYLALFRESEEVRVLLMDLR 964

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             AS GL ++  +RVF++ PIW  ++E Q I RAHR+G TRP+ VETL ++ T+E++ML+
Sbjct: 965  QASHGLHIANASRVFIVNPIWQPNVESQAIKRAHRIGQTRPVFVETLVLKDTLEDKMLK 1023



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 11/130 (8%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
           ++ L   TLI+VP  LV+HW  +I  H    ++ +   +  K PS   L   YD+V+ + 
Sbjct: 406 QIRLCSGTLIIVPPNLVNHWHNEISAHTNGLKVLVLRNSSDKTPSPDEL-LQYDIVLFSR 464

Query: 669 NRLSAEWG-----RR-----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
            R   E G     RR     ++SP+ ++HWLR+++DEGH +  S N T  + +   L   
Sbjct: 465 IRFEKEAGEVVNNRRISFTPEESPLTKLHWLRIIVDEGHNVAGSGNRTTMMHILSQLHIE 524

Query: 719 NRWLLTGTPT 728
            RW+++GTP+
Sbjct: 525 RRWIVSGTPS 534


>gi|348511041|ref|XP_003443053.1| PREDICTED: LOW QUALITY PROTEIN: helicase-like transcription
           factor-like [Oreochromis niloticus]
          Length = 966

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 103/193 (53%), Gaps = 15/193 (7%)

Query: 600 ALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLA 658
           ++ E  D ++   +R TLI+ P  ++ +W  Q +QHV P  +L+++++   ++  +    
Sbjct: 431 SIAESTDDLK---ARTTLIICPLSVLSNWLDQFEQHVDPNVKLNVYLYYGPERNRSKKFL 487

Query: 659 WDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
              DVVITT+N LS+++G   KSP+  + WLRV+LDEGH + +     +K    + L A 
Sbjct: 488 SSQDVVITTYNVLSSDFG--NKSPLHGISWLRVVLDEGHIIRNPNAQMSK--AVLDLKAQ 543

Query: 719 NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL 778
            RW+L+GTP  N+    +  L  ++ FL  + +   ++ W+  I RP       G   L 
Sbjct: 544 RRWILSGTPIQNS----VRDLWMLVAFLGLKPF-DTREWWNRVIQRPVTQGDRAGLQHLQ 598

Query: 779 QLLHRCMISARKT 791
            L+    I+ R+T
Sbjct: 599 TLVK--YITLRRT 609



 Score = 70.9 bits (172), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 3/121 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH---DASCLALLMD 1049
            K ++ SQF   + ++E  L   G  F  +   M    + + +  F+    D+  + LL  
Sbjct: 813  KCLVVSQFTRFLTILETPLREHGFSFVRLDGTMTQKKRTQVIQEFQSSAADSPTIMLLSL 872

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+L+  + VFLM+P W+ + EEQ I R HR+G  R + V    ++ +VEE M++
Sbjct: 873  KAGGVGLNLTAASHVFLMDPAWNPATEEQCIDRCHRLGQKRKVVVTKFIVKDSVEENMVK 932

Query: 1110 F 1110
             
Sbjct: 933  I 933


>gi|297739163|emb|CBI28814.3| unnamed protein product [Vitis vinifera]
          Length = 964

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 197/485 (40%), Gaps = 81/485 (16%)

Query: 679  KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSH 738
            +KS +  V W R++LDE H +      +N  +  ++L +  +W L+GTP  N    ++  
Sbjct: 475  RKSILHSVKWDRIILDEAHFIKD--RRSNTAKAVLALESEYKWALSGTPLQN----RVGE 528

Query: 739  LQPMLKFLHEEAYGQ----------------------NQKA------WDGGILRPFEA-- 768
            L  +++FL    Y                          K+      W+  +  P +A  
Sbjct: 529  LYSLIRFLRIIPYSYYLCKDCDCRTLDYSSSTECPNCEHKSVRHFCWWNKYVATPIQAMG 588

Query: 769  EMEEGRSRLLQLLHRCMIS--------ARKTDLQTIPLCIK-EVTFLNFTEE--HAGTYN 817
             + EG+  ++ L H+ + S         R  DL   P  +      L+  EE  +   YN
Sbjct: 589  NIGEGQRAMILLKHKILKSILLRRTKKGRAADLALPPRIVSLRRDTLDIKEEDYYQSLYN 648

Query: 818  E----LVVTVRRNILMADWNDPSHVESLLNP-KQWKFRSTTIRNLRLSCCVAGHIKVTDA 872
            E        V    LM   N+ +H+  LL   +Q       +   R S   AG+I  T+ 
Sbjct: 649  ESQAQFNTYVEAGTLM---NNYAHIFDLLTRLRQAVDHPYLVVYSRTSTLRAGNIVDTEN 705

Query: 873  GEDIQETMDVLVENGLDPL--SQEYAFIKYNLLNGGNCLRHILCLDC---VAMDSEKCSL 927
            GE +    +  +E   DP+  S  + F K  L +    L  + C  C   + +D      
Sbjct: 706  GEQVCGICNDPLE---DPVVTSCAHVFCKACLNDFSTTLGQVSCPSCSKPLTVDLTTSMD 762

Query: 928  PGCGFLYEMQSPEILTRPENPNPKWPVPQDLI-ELQPSYRQWSNTNTFLKQDLYRPNLES 986
            PG              R      K   P  ++  ++    Q S     L++++ R  +E 
Sbjct: 763  PG-------------DRDMKTTIKGFKPSSILNRIRLDDFQTSTKIDALREEI-RFMVER 808

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
            + +   K I+FSQF   + +I   L  +GI    +   M  + +  ++  F ++  C   
Sbjct: 809  DGSA--KGIVFSQFTSFLDLINYSLQKSGITCVQLVGSMSMAARDAAISRFTNEPDCKIF 866

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            LM   +  + L+L+  + VFLM+P W+ ++E Q   R HR+G  +PI +    +  T+EE
Sbjct: 867  LMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIEKTIEE 926

Query: 1106 QMLEF 1110
            ++L+ 
Sbjct: 927  RILKL 931


>gi|119194229|ref|XP_001247718.1| hypothetical protein CIMG_01489 [Coccidioides immitis RS]
 gi|392863038|gb|EAS36266.2| SNF2 family helicase [Coccidioides immitis RS]
          Length = 1271

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 72/118 (61%), Gaps = 1/118 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +   +   + + L + G++F    S +    K + L +F +      LLMD  
Sbjct: 940  EKIIIFYENNNNAFWVAEGLEMLGVEFRIYASTLKPKLKAEYLALFNNSECVRVLLMDVR 999

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             AS GL L+  +R+F++ PIWD ++E Q I RAHR+   +P++VETL ++GT+E++ML
Sbjct: 1000 QASHGLHLASASRIFIINPIWDPNIESQAIKRAHRISQMKPVYVETLVLKGTLEDKML 1057



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 7/130 (5%)

Query: 605 LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVV 664
           + S  L L+  TL++VP  LVDHW  +I++H    ++ +      + P A  L   YD+V
Sbjct: 418 IKSSYLRLASGTLVIVPPNLVDHWLHEIEKHTEGLKVLVLRDVSDRLPPADEL-LQYDIV 476

Query: 665 ITTFNRLSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
           +   +R   E    +       SP+ ++HWLR+++DEGH   SS   +N +     L   
Sbjct: 477 LFARSRFEKEKAGFEHHWAIYDSPLKELHWLRIIVDEGHNFASSGGKSNAIHFLEMLHVE 536

Query: 719 NRWLLTGTPT 728
            RW+++GTP+
Sbjct: 537 RRWVVSGTPS 546


>gi|408391651|gb|EKJ71022.1| hypothetical protein FPSE_08807 [Fusarium pseudograminearum CS3096]
          Length = 926

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 194/465 (41%), Gaps = 79/465 (16%)

Query: 710  QMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFE-A 768
            Q   +L + +RW +TGTP  N    +L  L  + +F+    Y  + K +D  I R ++  
Sbjct: 491  QAMCALESRSRWAVTGTPIQN----RLGDLASLFRFVRVHPYT-DLKCFDADISRLWKTG 545

Query: 769  EMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL 828
            E +E   RL + L +C++  R     ++P        ++F  E    Y+ L    R N +
Sbjct: 546  EYQEAIKRL-KRLSKCLLLRRDKGTVSLPPRKDMQCPVDFNPEERALYDNL----RENTI 600

Query: 829  MADWNDPSHVES-LLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENG 887
            ++  ++ S  +S  + P  +      I +LRL C +  H              D +++N 
Sbjct: 601  IS-IDEASKCDSDSIKPGSYANVLQQIESLRLVCNIGLHYHTRH---------DKVIKNT 650

Query: 888  LDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPEN 947
              P + E+A       N    +  I CL C +             + E  S    T  +N
Sbjct: 651  --PEADEWAKTAQATFNMEREMVPIFCLRCSSASD----------ITETISEGPATTSQN 698

Query: 948  P-------------------------NPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRP 982
            P                         NP+  V Q  +       + S ++   + D+  P
Sbjct: 699  PLFFSCLRFVCSECVQSSRQNIECGHNPRCAVAQ--VSTSGQSLETSLSDMQPQTDIGLP 756

Query: 983  N-----LESNKALP--DKVIIFSQFLEHIHVIE---QQLTVAGIKFAGMYSPMHSSNKIK 1032
            +     +    +LP  +K +IFS +   + ++E   +Q +++ ++F G   P  S   + 
Sbjct: 757  SKVKALITDINSLPSYEKCVIFSTWRMTLKIVEAGLKQSSISSVRFDGNV-PQKSRQNV- 814

Query: 1033 SLDMFRHDASCLALLMDGS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRP 1091
             +D FR+D S   +L+  S  + GL L+  TR +LMEP W+ ++EEQ ++R HR+G T+ 
Sbjct: 815  -VDKFRNDPSVRVMLLTLSCGAAGLTLTVATRAYLMEPHWNPTLEEQALARIHRIGQTQE 873

Query: 1092 IHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSH 1136
            +      MR + E Q+++        ++ L   L+ P   G  S 
Sbjct: 874  VTTVRFFMRNSFEHQVMK----RQESKKYLAGLLLSPHDNGCGSE 914


>gi|327350451|gb|EGE79308.1| SNF2 family helicase [Ajellomyces dermatitidis ATCC 18188]
          Length = 1214

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 72/118 (61%), Gaps = 1/118 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +       I + L +  ++F    + + +  + + L +F    +   LLMD  
Sbjct: 937  EKIIIFYEGNNTGFYIAEGLEILSVEFRIYANTLKTQTRSEYLSLFNETETVRVLLMDLR 996

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             AS GL ++  +RVF++ PIWD ++E Q I RAHR+  T+P++VETL ++GT+E++ML
Sbjct: 997  QASHGLHIACASRVFIVNPIWDPNIESQAIKRAHRISQTKPVYVETLVLKGTLEDRML 1054



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 16/134 (11%)

Query: 608 VRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--PSAHSLAWDYDVVI 665
            +L L   TLIVVP  LVDHW ++I +H +   L + V  D ++  P    L  +YD+++
Sbjct: 430 TKLRLCSGTLIVVPPNLVDHWLSEIDKHTQ--GLKVLVLRDSRRATPPPEKL-LEYDILL 486

Query: 666 TTFNRLSAEWG-----------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
            + +R   E G            RK SP+ ++HWLR+++DEGH   +    T  +     
Sbjct: 487 FSKSRFEKEAGGGGRSSGFAPEPRKDSPLKRLHWLRIIVDEGHNFAAKGARTTAVHALSQ 546

Query: 715 LTASNRWLLTGTPT 728
           L    RW+++GTP+
Sbjct: 547 LHVERRWVVSGTPS 560


>gi|393218203|gb|EJD03691.1| hypothetical protein FOMMEDRAFT_19080 [Fomitiporia mediterranea
            MF3/22]
          Length = 1340

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)

Query: 973  TFLKQDLYRPNL-----------ESNKALPD---KVIIFSQFLEHIHVIEQQLTVAGIKF 1018
            TF + + Y PN            E    + D   K ++FSQ+   +  +E  L  AGI++
Sbjct: 1153 TFSRMNPYSPNYDPSSIEIQMVDEKGNDIDDNIVKTVVFSQWTSMLDKVEDALEAAGIRY 1212

Query: 1019 AGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEE 1077
              +   M    + +++D+ ++D  C  LL+   +  +GL+L+   RV+LM+P W+ ++E 
Sbjct: 1213 ERLDGTMRRDERTRAMDILKNDPGCEVLLVSLKAGGVGLNLTAAQRVYLMDPYWNPAVEN 1272

Query: 1078 QVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            Q + R HR+G  +P+    L +  T+E ++LE
Sbjct: 1273 QAVDRIHRLGQRKPVTTVKLIIENTIEARLLE 1304



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 25/207 (12%)

Query: 681 SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
           S +  ++W RV+LDE H++  +  + ++   +  L A  R  LTGTP  N    +L  + 
Sbjct: 787 SALQSIYWFRVVLDEAHSIKETSTVASR--ASCDLEADRRLCLTGTPVQN----KLDDVF 840

Query: 741 PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK-------TDL 793
            ++KFL    +  ++  W   I  P +     G +RL  ++    +   K       T +
Sbjct: 841 ALIKFLRLNPF-DDKNVWQEFIGVPVKFGQPVGVARLQIVMKSITLRRTKETKAEDGTSI 899

Query: 794 QTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTT 853
            ++P    E+  L F E+    Y+E     R      ++ + SH   ++  K +      
Sbjct: 900 LSLPPRRDELRLLKFDEQEQRIYDEFFKESR-----DEFKELSHKNEVM--KNYVGILQK 952

Query: 854 IRNLRLSCCVAGHIKVTDAGEDIQETM 880
           I  LR  C    H ++ + G+D+QE++
Sbjct: 953 ILRLRQIC---DHYELVE-GKDLQESV 975


>gi|426199854|gb|EKV49778.1| hypothetical protein AGABI2DRAFT_198827 [Agaricus bisporus var.
           bisporus H97]
          Length = 1178

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 34/152 (22%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           +YLS ATL+VVP  L+  W  +I +H       L + +  K PSA +LA +YD+++ T+N
Sbjct: 350 MYLSPATLVVVPPNLLSQWYREISKHCELALRVLVLRSGTKMPSAIALASEYDIILMTYN 409

Query: 670 RLSAEWGRRK------------------------------KSPMMQVHWLRVMLDEGHTL 699
           R +AE   +K                               SP++QV W R+++DEGH  
Sbjct: 410 RYTAEAAHKKISALHSLPPCKCPNIPGSRIPDCKCPSPANVSPLLQVRWKRLVIDEGHVS 469

Query: 700 GS-SLNLTNKLQMAISLTASNRWLLTGTPTPN 730
            S S NLT   ++   L+   RW++TGTPT N
Sbjct: 470 ASLSTNLTPFTKL---LSVERRWIVTGTPTTN 498



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 5/137 (3%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K++IFS     +  + + L +  IKF    + +    + + +  F    +    LM+  
Sbjct: 947  EKILIFSDSELTLAHVAEALELIQIKFLRFTTQIQPQFREQLVLTFETSETYRVFLMELK 1006

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE- 1109
              + GL+L   +RV   EP+W   +E Q I R HR+G TR I V+TLA+RGT EE M+E 
Sbjct: 1007 HGARGLNLISASRVIFCEPVWQADVESQAIKRVHRIGQTRSITVKTLAIRGTAEETMVER 1066

Query: 1110 ---FLQDTDRCRRLLKE 1123
               F    D+  +LL+E
Sbjct: 1067 RNLFKGSNDKVPKLLEE 1083



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTA---PTMRD 223
           L+ +Q+ ++  M+ RE +   ++ PL + L+T +G  F +   + ++  G     PT   
Sbjct: 137 LYRYQRESIASMVSREIDPRAVQDPLGLPLSTINGKDFDLLPATMEVRNGRGYVDPT--- 193

Query: 224 FHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGV 259
             GG+ C+E G GKT+  L LIL T   L  PPD +
Sbjct: 194 -RGGLLCEELGTGKTVMILGLILSTLKQLPSPPDTI 228


>gi|326480935|gb|EGE04945.1| hypothetical protein TEQG_03790 [Trichophyton equinum CBS 127.97]
          Length = 1000

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 1/118 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +       I + L + G  F      + +S K + L  F    S   LLMD  
Sbjct: 721  EKIIIFYESENTAFWIAEGLELVGTDFRIYAHTLKASQKSEYLSTFNEGESVRVLLMDLR 780

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             AS GL ++  +RV+++ PIWD ++E Q I RAHR+  TRP++VETL ++ T+E++ML
Sbjct: 781  QASHGLHIASASRVYIVNPIWDPNIESQAIKRAHRISQTRPVYVETLVLKDTLEDKML 838


>gi|357122669|ref|XP_003563037.1| PREDICTED: DNA repair protein RAD16-like [Brachypodium distachyon]
          Length = 861

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE  L  +G+K   +   M+ S K +++D F +D  C   LM   +
Sbjct: 710  KGIVFSQFTSFLDLIEFSLQKSGVKCVQLNGKMNMSEKGRAIDTFINDPDCRIFLMSLKA 769

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              + L+L+  + VFLM+P W+ ++E Q   R HR+G  +PI      ++ TVEE++L+ L
Sbjct: 770  GGVALNLTVASHVFLMDPWWNPAVESQAQDRIHRIGQFKPIRSVRFVIKDTVEERILQ-L 828

Query: 1112 QDTDR 1116
            QD  R
Sbjct: 829  QDKKR 833



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 6/79 (7%)

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
           +E   R +SP+  V W R++LDE H +       N  +   +L +  +W L+GTP  N  
Sbjct: 369 SERQSRGRSPLHSVRWERIILDEAHFIKD--RRCNTARAVFALESEYKWALSGTPLQN-- 424

Query: 733 NSQLSHLQPMLKFLHEEAY 751
             ++  L  +++FL    Y
Sbjct: 425 --RVGELYSLIRFLQVFPY 441


>gi|317038672|ref|XP_001401946.2| SNF2 family helicase [Aspergillus niger CBS 513.88]
          Length = 1203

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 70/119 (58%), Gaps = 1/119 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF         I + L + G+ F    S +  + + + L +FR       LLMD  
Sbjct: 905  EKIIIFYDNNNAAFWIAEGLELLGVDFRIYASTLKPTMRAEYLALFRESEEVRVLLMDLR 964

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             AS GL ++  +RVF++ PIW  ++E Q I RAHR+G TRP+ VETL ++ T+E++ML+
Sbjct: 965  QASHGLHIANASRVFIVNPIWQPNVESQAIKRAHRIGQTRPVFVETLVLKDTLEDKMLK 1023



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 11/130 (8%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
           ++ L   TLIVVP  LV+HW+ +I  H    ++ +   +  K PS   L   YD+V+ + 
Sbjct: 406 QIRLCSGTLIVVPPNLVNHWQNEISAHTDGLKVLVLRNSSDKTPSPDEL-LQYDIVLFSR 464

Query: 669 NRLSAEWG-----RR-----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
            R   E G     RR     ++SP+ ++HWLR+++DEGH +  S N T  + +   L   
Sbjct: 465 IRFEKEAGEVVNNRRNSFTPEESPLTKLHWLRIIVDEGHNVAGSGNRTTMMHILSQLHIE 524

Query: 719 NRWLLTGTPT 728
            RW+++GTP+
Sbjct: 525 RRWIVSGTPS 534


>gi|359485610|ref|XP_002269303.2| PREDICTED: ATP-dependent helicase rhp16-like [Vitis vinifera]
          Length = 989

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 197/485 (40%), Gaps = 81/485 (16%)

Query: 679  KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSH 738
            +KS +  V W R++LDE H +      +N  +  ++L +  +W L+GTP  N    ++  
Sbjct: 500  RKSILHSVKWDRIILDEAHFIKD--RRSNTAKAVLALESEYKWALSGTPLQN----RVGE 553

Query: 739  LQPMLKFLHEEAYGQ----------------------NQKA------WDGGILRPFEA-- 768
            L  +++FL    Y                          K+      W+  +  P +A  
Sbjct: 554  LYSLIRFLRIIPYSYYLCKDCDCRTLDYSSSTECPNCEHKSVRHFCWWNKYVATPIQAMG 613

Query: 769  EMEEGRSRLLQLLHRCMIS--------ARKTDLQTIPLCIK-EVTFLNFTEE--HAGTYN 817
             + EG+  ++ L H+ + S         R  DL   P  +      L+  EE  +   YN
Sbjct: 614  NIGEGQRAMILLKHKILKSILLRRTKKGRAADLALPPRIVSLRRDTLDIKEEDYYQSLYN 673

Query: 818  E----LVVTVRRNILMADWNDPSHVESLLNP-KQWKFRSTTIRNLRLSCCVAGHIKVTDA 872
            E        V    LM   N+ +H+  LL   +Q       +   R S   AG+I  T+ 
Sbjct: 674  ESQAQFNTYVEAGTLM---NNYAHIFDLLTRLRQAVDHPYLVVYSRTSTLRAGNIVDTEN 730

Query: 873  GEDIQETMDVLVENGLDPL--SQEYAFIKYNLLNGGNCLRHILCLDC---VAMDSEKCSL 927
            GE +    +  +E   DP+  S  + F K  L +    L  + C  C   + +D      
Sbjct: 731  GEQVCGICNDPLE---DPVVTSCAHVFCKACLNDFSTTLGQVSCPSCSKPLTVDLTTSMD 787

Query: 928  PGCGFLYEMQSPEILTRPENPNPKWPVPQDLI-ELQPSYRQWSNTNTFLKQDLYRPNLES 986
            PG              R      K   P  ++  ++    Q S     L++++ R  +E 
Sbjct: 788  PG-------------DRDMKTTIKGFKPSSILNRIRLDDFQTSTKIDALREEI-RFMVER 833

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
            + +   K I+FSQF   + +I   L  +GI    +   M  + +  ++  F ++  C   
Sbjct: 834  DGSA--KGIVFSQFTSFLDLINYSLQKSGITCVQLVGSMSMAARDAAISRFTNEPDCKIF 891

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            LM   +  + L+L+  + VFLM+P W+ ++E Q   R HR+G  +PI +    +  T+EE
Sbjct: 892  LMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIEKTIEE 951

Query: 1106 QMLEF 1110
            ++L+ 
Sbjct: 952  RILKL 956


>gi|315040818|ref|XP_003169786.1| ATP-dependent helicase RIS1 [Arthroderma gypseum CBS 118893]
 gi|311345748|gb|EFR04951.1| ATP-dependent helicase RIS1 [Arthroderma gypseum CBS 118893]
          Length = 1050

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 20/188 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           +S++TL+V P  L+  W+ +I+  + R  +L + V+    +        ++DVVITT+  
Sbjct: 337 VSKSTLVVAPLALIKQWEGEIESKIERSHRLSVCVYHGTGRTKHRDDLDNFDVVITTYGT 396

Query: 671 LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTP 729
           LS+E G  K S    +HW R++LDE HT+    N   K   A+ +L +  RW LTGTP  
Sbjct: 397 LSSEHG--KDSGCFGIHWYRIVLDEAHTIK---NRNAKATQAVYALNSLYRWCLTGTPLQ 451

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRCM 785
           N     L  LQ +++FL  + Y +   AW   I RP    M  GR     R LQ+  +  
Sbjct: 452 NN----LDELQSLIRFLRIKPYDE-LAAWREQITRP----MSNGRGGLALRRLQVYLKAF 502

Query: 786 ISARKTDL 793
           +  R  D+
Sbjct: 503 MKRRTKDV 510



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 7/151 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L   GI +A     M +  +  SL+  R+ +S   LL    +
Sbjct: 827  KFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASLNRLRNSSSTRVLLCSLRA 886

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L ++GTVEE++LE  
Sbjct: 887  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKVYKLTIKGTVEERILEL- 945

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
               +R R L K  +   E + A    T+ D 
Sbjct: 946  --QERKRELAKSTI---EGKSAAGKLTMKDM 971


>gi|449550973|gb|EMD41937.1| hypothetical protein CERSUDRAFT_129183 [Ceriporiopsis subvermispora
            B]
          Length = 1305

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 69/118 (58%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  IE  L  AGI++  +   M    + ++++  ++D  C  LL+   +
Sbjct: 1152 KTVVFSQWTSMLDKIEDALEAAGIRYDRLDGTMKRDERTRAMEALKNDPGCEVLLVSLKA 1211

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RV+LM+P W+ ++E Q + R HR+G TRP+    L +  ++E ++LE
Sbjct: 1212 GGVGLNLTAAQRVYLMDPYWNPAVENQAVDRIHRLGQTRPVTTIKLIIENSIEARLLE 1269



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 21/175 (12%)

Query: 676 GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQ 735
           G    S +  VHW RV+LDE H++  +   T   +    L A  R  LTGTP  N    +
Sbjct: 743 GSEASSALQSVHWFRVVLDEAHSIKET--TTVGCRACCDLVADRRLCLTGTPVQN----K 796

Query: 736 LSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK----- 790
           L  +  ++KFL       ++  W   I  P +     G +R LQ + +C+   R      
Sbjct: 797 LDDVYALIKFLRLSPL-DDKSVWTEYIGTPVKYGQPLGVAR-LQTIMKCITLRRTKESKA 854

Query: 791 ---TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
              T + ++P    E+ +L F  +    Y++     +     A++N+ SH   ++
Sbjct: 855 EDGTRILSLPPRRDELRYLKFDAQEQAIYDQFFTESK-----AEFNELSHKNEVM 904


>gi|328768354|gb|EGF78401.1| hypothetical protein BATDEDRAFT_90880 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1225

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 72/119 (60%), Gaps = 1/119 (0%)

Query: 990  LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            LP K +IFSQ+ + + +IE  L   G KF  +   M  S++ +++  F+ D S   +L+ 
Sbjct: 1015 LPVKSVIFSQWTKMLSLIEGPLLTHGFKFCKLVGKMVLSSRSEAMLKFKTDPSVTIMLIS 1074

Query: 1050 -GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
              S  +GL+L+  +RV+LMEP W+ ++E+Q I R HRMG T P+      ++G++EE +
Sbjct: 1075 LRSGGVGLNLTAASRVYLMEPYWNPAVEQQAIDRVHRMGQTLPVVSIRFIVKGSIEENI 1133



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 43/240 (17%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP-SAHSLAWDYDVVITTFNRL 671
           +RATLIV P   + +W+ QI+ H +   L ++V+   +K   AH +A  YD+VITT+  L
Sbjct: 550 TRATLIVCPLSTISNWEEQIEAHTKRNSLRVYVYHGRQKSIYAHHIA-KYDIVITTYTTL 608

Query: 672 SAEWGRRKKS-----------------------PMMQVHWLRVMLDEGHTLGSSLNLTNK 708
           +  + R +                         P+  ++W R++LDE H + SS   T +
Sbjct: 609 ANSYFRSRSQKKPDNYEDDIGEDSQSTTSTATPPLHMIYWHRIVLDEAHIIKSS--TTVQ 666

Query: 709 LQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEA 768
            + A  L A  RW LTGTP  N     +  L  +L+FL  + +      W   I RP + 
Sbjct: 667 ARAAFLLQAQKRWCLTGTPIQN----HMDDLYSLLRFLRLQPFDA-LANWKYYIARPIKQ 721

Query: 769 EMEE-GRSRLLQLLHRCMISARKTDLQ--------TIPLCIKEVTFLNFTEEHAGTYNEL 819
                G +RL  ++    I+ R+T  Q        +IP  I  V  L+   +    Y+ +
Sbjct: 722 STNSIGLTRLQTIMK--AITLRRTKSQMMDGKPLISIPEKIDRVILLDLLPKEREIYDAI 779



 Score = 53.9 bits (128), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 13/109 (11%)

Query: 161 PCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFY------FYVNTVSGDI- 213
           P +   L+ HQ+ A+ +M +RE   E +        ++  GF+      FY NT++ +I 
Sbjct: 392 PKLSTPLYKHQRQALYFMTNREEGVETINGDSSDAASSCIGFWTQLPNGFYKNTITNEIV 451

Query: 214 ATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKT--QGTLADPPDGVK 260
           A    PT+    GG+  D+ GLGKTI  +SLI+KT  Q  +  PP   K
Sbjct: 452 AKKPQPTL----GGILADDMGLGKTIEVISLIVKTMPQTPVRLPPKSTK 496


>gi|350632398|gb|EHA20766.1| hypothetical protein ASPNIDRAFT_193507 [Aspergillus niger ATCC 1015]
          Length = 1152

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 70/119 (58%), Gaps = 1/119 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF         I + L + G+ F    S +  + + + L +FR       LLMD  
Sbjct: 905  EKIIIFYDNNNAAFWIAEGLELLGVDFRIYASTLKPTMRAEYLALFRESEEVRVLLMDLR 964

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             AS GL ++  +RVF++ PIW  ++E Q I RAHR+G TRP+ VETL ++ T+E++ML+
Sbjct: 965  QASHGLHIANASRVFIVNPIWQPNVESQAIKRAHRIGQTRPVFVETLVLKDTLEDKMLK 1023



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 11/130 (8%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
           ++ L   TLIVVP  LV+HW+ +I  H    ++ +   +  K PS   L   YD+V+ + 
Sbjct: 406 QIRLCSGTLIVVPPNLVNHWQNEISAHTDGLKVLVLRNSSDKTPSPDEL-LQYDIVLFSR 464

Query: 669 NRLSAEWG-----RR-----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
            R   E G     RR     ++SP+ ++HWLR+++DEGH +  S N T  + +   L   
Sbjct: 465 IRFEKEAGEVVNNRRNSFTPEESPLTKLHWLRIIVDEGHNVAGSGNRTTMMHILSQLHIE 524

Query: 719 NRWLLTGTPT 728
            RW+++GTP+
Sbjct: 525 RRWIVSGTPS 534


>gi|327303684|ref|XP_003236534.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892]
 gi|326461876|gb|EGD87329.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892]
          Length = 1167

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 15/235 (6%)

Query: 585 KTLDNLAFDLAALRLAL---CEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQL 641
           KTL  L+   ++L  A    CE      L  ++ TL+V P   V +W +QI++H++ G L
Sbjct: 555 KTLSILSLVCSSLSDATAWACEKPADPSLINAKTTLLVSPLSAVGNWVSQIKEHIKDGAL 614

Query: 642 HLFVWTDHKKPSAHSLAWDYDVVITTFNRL----SAEWGRRKKSPMMQVHWLRVMLDEGH 697
             +V+    +         YD+VITT+  +    S +  +R  SP+++++  R++LDE H
Sbjct: 615 SYYVFHGLNRTEDPKELARYDIVITTYTTILSDVSGKSSKRGTSPLVRMNMFRIVLDEAH 674

Query: 698 TLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKA 757
            +        + Q    L A  RW +TGTP  N    +L  L  +LKFL    Y +  + 
Sbjct: 675 IIRE--QNAAQSQAIFQLNAQRRWSVTGTPIQN----RLEDLGAVLKFLRLSPYDERGR- 727

Query: 758 WDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEH 812
           +   I+ PF+ E     + L  L+    +  R  D   +P    +   L FTE+ 
Sbjct: 728 FASHIVSPFKTENPNAITNLRVLVDSFTLR-RVKDRINLPARHDKTVMLTFTEQE 781



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 8/166 (4%)

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDM 1036
            D    N +S++  P K +IFS +  H+ +IE  L   G+  +  +   M    +  S++ 
Sbjct: 999  DTAEDNKKSSRQPPIKSVIFSAWTSHLDLIEIALEENGLTGYTRLDGTMSLKQRNASIET 1058

Query: 1037 FRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            F  D +   LL+  G+  +GL+L+  + V++MEP ++ +   Q + R HR+G TR +   
Sbjct: 1059 FSTDDNVTILLVTIGAGGVGLNLTAGSMVYIMEPQYNPAAIAQAVDRVHRIGQTREVTTI 1118

Query: 1096 TLAMRGTVEEQMLEF------LQDTDRCRRLLKEELVKPEREGARS 1135
               M  ++EE++ E       L D    R++ + EL K   E  RS
Sbjct: 1119 QFIMNDSIEEKITELAKRKQKLADMSLNRKMDRRELQKERLEEYRS 1164


>gi|400601921|gb|EJP69546.1| SNF2 family DNA-dependent ATPase [Beauveria bassiana ARSEF 2860]
          Length = 1087

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 2/124 (1%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FS +  H+ +IE  L  AGI F  +   M  +++  ++D FR D S   +L+  
Sbjct: 930  PYKSVVFSGWTSHLDLIELALKSAGISFTRLDGTMSRASRTTAMDKFREDDSVHVILVSI 989

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  LGL+L+    V++MEP ++ + E Q I R HR+G  RP+      MR + EE+M+E
Sbjct: 990  MAGGLGLNLTAGNSVYVMEPQFNPAAEAQAIDRVHRLGQKRPVKTVRYIMRNSFEEKMVE 1049

Query: 1110 FLQD 1113
             LQD
Sbjct: 1050 -LQD 1052



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 7/123 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S+ATLIV P   V +W+ QI+QH++PG L++ ++    +    +    +DVV+TT+  +S
Sbjct: 506 SKATLIVCPLSTVTNWEEQIKQHIQPGTLNVHIYHGPSRIRDTAKLASFDVVVTTYGSVS 565

Query: 673 AEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            E   R++      P+ ++ W R++LDE H +      T + +    L +  +W +TGTP
Sbjct: 566 NELSSRRRGKQGQYPLEEIGWFRIVLDEAHMIRE--QSTVQFKAICRLQSDRKWAVTGTP 623

Query: 728 TPN 730
             N
Sbjct: 624 VQN 626


>gi|134074551|emb|CAK38844.1| unnamed protein product [Aspergillus niger]
          Length = 1237

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 70/119 (58%), Gaps = 1/119 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF         I + L + G+ F    S +  + + + L +FR       LLMD  
Sbjct: 939  EKIIIFYDNNNAAFWIAEGLELLGVDFRIYASTLKPTMRAEYLALFRESEEVRVLLMDLR 998

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             AS GL ++  +RVF++ PIW  ++E Q I RAHR+G TRP+ VETL ++ T+E++ML+
Sbjct: 999  QASHGLHIANASRVFIVNPIWQPNVESQAIKRAHRIGQTRPVFVETLVLKDTLEDKMLK 1057



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 11/130 (8%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
           ++ L   TLIVVP  LV+HW+ +I  H    ++ +   +  K PS   L   YD+V+ + 
Sbjct: 440 QIRLCSGTLIVVPPNLVNHWQNEISAHTDGLKVLVLRNSSDKTPSPDEL-LQYDIVLFSR 498

Query: 669 NRLSAEWG-----RR-----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
            R   E G     RR     ++SP+ ++HWLR+++DEGH +  S N T  + +   L   
Sbjct: 499 IRFEKEAGEVVNNRRNSFTPEESPLTKLHWLRIIVDEGHNVAGSGNRTTMMHILSQLHIE 558

Query: 719 NRWLLTGTPT 728
            RW+++GTP+
Sbjct: 559 RRWIVSGTPS 568


>gi|453088883|gb|EMF16923.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
          Length = 1100

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE  L  AGI+F      M    + +SL   R+D     LL     
Sbjct: 887  KTIVFSQFTTMLDLIEPHLEHAGIRFVRYDGSMRPDAREQSLKSLRNDKRTRVLLCSLKC 946

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L +R +VEE++LE L
Sbjct: 947  GSLGLNLTVASRVVIVEPFWNPFVEEQAIDRVHRLNQTVDVKVFRLTIRDSVEERILE-L 1005

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 1006 QEKKR 1010



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 104/231 (45%), Gaps = 36/231 (15%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           ATL+V P  L+  W+ +++  V R   L + V     +    +    YDVVITT+  L++
Sbjct: 370 ATLVVAPLALIKQWEGELKSKVHRSHALRVLVHHGPSRAKNSAELKKYDVVITTYQTLTS 429

Query: 674 EW---------GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLT 724
           E          GRR       VHW R+MLDE H++ +        Q   +L A  RW LT
Sbjct: 430 EHAGSDMTKENGRR--VGCFGVHWYRLMLDEAHSIKN--RSAKSTQACCALNAWYRWCLT 485

Query: 725 GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQL 780
           GTP  N     L  LQ ++KFL  + Y +  K W   I +P    M+ GR  L    L +
Sbjct: 486 GTPMQNN----LDELQSLIKFLRIKPYCELPK-WKESITQP----MKNGRGGLAMQRLNV 536

Query: 781 LHRCMISARKTDLQTIPLCIKEVTFLNF---TEEHAGTYNELVVTVRRNIL 828
             +  +  R  D+      +K+   LNF   + E  G  N  +  V+R +L
Sbjct: 537 FLKAFMKRRTKDI------LKKDGALNFGGKSNEEGGATNGGMQIVKREVL 581


>gi|358055713|dbj|GAA98058.1| hypothetical protein E5Q_04739 [Mixia osmundae IAM 14324]
          Length = 1275

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 26/186 (13%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TLIV P  ++ +W  QI+ HV+ G L + V     +         +DVVITT++ L++E
Sbjct: 463 GTLIVCPLSVISNWTKQIRTHVKKGTLKVGVHHRSNERYDRKALKRFDVVITTYDTLASE 522

Query: 675 WGR-------------------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISL 715
            GR                   +K  P+++  W RV+LDEGH + +  + T K + A+ L
Sbjct: 523 NGRKSEKTKKKHKIKTGEDLQDQKNGPLLRTPWRRVVLDEGHIIRN--HTTRKHEAAVML 580

Query: 716 TASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS 775
            A  RW+LTGTP  N    + +    ++ F+           W+  I RP +   + GR 
Sbjct: 581 VAERRWVLTGTPIVN----RTADTGSLVSFIRSCKALDQTHLWNRHIERPVKKGQQSGR- 635

Query: 776 RLLQLL 781
           RLLQ +
Sbjct: 636 RLLQAV 641



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 70/121 (57%), Gaps = 1/121 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+  H+ +IE+QL    I +  +   M    + +++D+F+ D     +L+    
Sbjct: 890  KSLVFSQWTSHLDIIEKQLDRIKIAYCRIDGTMDQQTREQTIDLFQSDDEVTVMLLSLQV 949

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  ++ FLM+P W  ++E Q + R  R+G TR + +  + M  ++E++++E  
Sbjct: 950  GSLGLNLTAASQCFLMDPWWASAIETQAVDRVWRIGQTRDVKIFHMRMENSIEQRVIEIQ 1009

Query: 1112 Q 1112
            Q
Sbjct: 1010 Q 1010


>gi|189208001|ref|XP_001940334.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187976427|gb|EDU43053.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 742

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 107/457 (23%), Positives = 182/457 (39%), Gaps = 76/457 (16%)

Query: 714  SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEG 773
            +L A  RW +TGTP  N    +L  L  M +FL    Y  N++ ++  I+ P+ +  E+ 
Sbjct: 310  ALEAHARWAVTGTPLQN----RLGDLATMCEFLRVYPY-DNRECFESDIIYPWRSGDEDE 364

Query: 774  RSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWN 833
                ++ L   ++  R   +  +P        L F       YN           M   N
Sbjct: 365  AISRMKRLVNSILLRRTQGVVDLPPRTDLRYTLKFNHHEREHYN-----------MVQSN 413

Query: 834  DPSHVESLLNPKQWKFRSTTI----RNLRLSCCVAGHIKVTDA---------GEDIQETM 880
              S +++ ++        T+I      LRL C +  H +  ++             Q+ +
Sbjct: 414  VVSKIDAAISGSSVATTFTSIIQQINELRLVCNLGTHRRARNSILPTSTIWDKRTAQKAL 473

Query: 881  DVLVEN----------GLDPLSQEYAFIKYNLLNGGNCLRHILCL-DCVAMDSEKCSLP- 928
              L              LD  S     + Y+L +  +     +CL  C+      C  P 
Sbjct: 474  TTLATTEKVVCTRCTLDLDATST----VNYSLGSELSSPNSTVCLFSCLKAICSSCLDPY 529

Query: 929  ---GCGFLYEMQSPEILTRPENP--------NPKWPVPQDLIELQPSYRQWSNTNTFLKQ 977
                CG L    S  +   P NP        +P  P  +   E  P+          +  
Sbjct: 530  WNERCGCLPSCPSARV---PYNPGITYSGASSPSGPACEINDEPLPT-----KIKALVSD 581

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF 1037
             L +P          K I+FS +   + ++++ L+ + I +         SN+  +L  F
Sbjct: 582  LLKQPK-------GTKSIVFSFWTSTLDLVQKGLSGSFITYTRFDGTTSQSNRSTALKDF 634

Query: 1038 RHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVET 1096
            R D S   +LM  S S +GLD++  +R +++EP W+ ++EEQ ++R HRMG T+P+    
Sbjct: 635  RQDPSISVILMTISCSAVGLDITAASRAYILEPQWNPTVEEQALARVHRMGQTKPVTTIR 694

Query: 1097 LAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGA 1133
              M  T EE+++E    T   +R L E L+  E + A
Sbjct: 695  FVMENTFEERVVE----TQERKRRLAELLLSSEEQVA 727


>gi|327300653|ref|XP_003235019.1| SNF2 family helicase [Trichophyton rubrum CBS 118892]
 gi|326462371|gb|EGD87824.1| SNF2 family helicase [Trichophyton rubrum CBS 118892]
          Length = 920

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 18/196 (9%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           S+ATLI+ P  ++ +W+ QI  H+ +   L +  +    K  A +L+  YDVVITT+  L
Sbjct: 384 SKATLIISPLGVMSNWRDQIAAHIHKEYALRVLTYHGSGKKEAANLS-QYDVVITTYGAL 442

Query: 672 SAEWGR---------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
           ++E+G+         + K  +  + W RV+LDEGHT+ +    T     A  L A +RW 
Sbjct: 443 ASEYGQLLSATGKLAKTKRGLFAIRWRRVVLDEGHTIRTP--KTKAACAACMLEADSRWS 500

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           LTGTP  N     L  L    KF+      ++   +   ++RP  A  +E  S LLQ L 
Sbjct: 501 LTGTPIVNN----LKDLYSQGKFIRLSGGLEDLPVFHSALIRPLNAG-DENASLLLQALM 555

Query: 783 RCMISARKTDLQTIPL 798
             +   R+ D+  + L
Sbjct: 556 ATICLRRRKDMSFVNL 571



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 1/149 (0%)

Query: 988  KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALL 1047
            +A   K ++FSQ+   + +IE  L +  I FA +   M+S+ +  ++  F  D+ C  +L
Sbjct: 762  QATGTKTVVFSQWTSFLDLIEPHLVLYNINFARIDGKMNSAKRDAAMGKFSRDSECTVML 821

Query: 1048 MD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQ 1106
                  S+GL+L    +V L +  W  ++E+Q + R +R+G TRP  +  L M  ++E++
Sbjct: 822  ASLNVCSVGLNLVAANQVVLADSWWAPAIEDQAVDRVYRLGQTRPTTIWRLVMENSIEDR 881

Query: 1107 MLEFLQDTDRCRRLLKEELVKPEREGARS 1135
            +L+  ++         +E   P+ +  RS
Sbjct: 882  VLDIQKEKRELMSTAFQEKAGPKDQTQRS 910



 Score = 43.5 bits (101), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 26/119 (21%)

Query: 161 PCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYF-------YVNTVSGDI 213
           P +  +L P+Q+  + WML RE        P      ++D           Y+N ++ + 
Sbjct: 291 PQLSTELLPYQRQGLAWMLDRE-------SPSLPKEGSDDIVQLWKRVGKRYMN-IATNY 342

Query: 214 ATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL---------KTQGTLADPPDGVKIIW 263
           ++ TAP +    GG+  D+ GLGKT+  +SLIL          ++ TL   P GV   W
Sbjct: 343 SSSTAPPLAS--GGILADDMGLGKTLQVISLILANSTPKTSKSSKATLIISPLGVMSNW 399


>gi|320584136|gb|EFW98347.1| DNA-dependent ATPase of the nucleotide excision repair factor 4
           complex [Ogataea parapolymorpha DL-1]
          Length = 1082

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 24/210 (11%)

Query: 606 DSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK-PSAHSLAWDYDVV 664
           ++ +LY++ ++LIVVP  L   WK +I++HV+ G L +       + P + +   + D+V
Sbjct: 287 ETRKLYVTSSSLIVVPDNLFHQWKIEIRKHVQEGYLKILELQGQAELPQSVAEVINNDIV 346

Query: 665 ITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLT 724
           + + N  S +   +  S +  ++W R+++DEGH++ S    T  + +A  L    +W +T
Sbjct: 347 LISLNYFSRQ-SEKPDSILRSIYWKRLIIDEGHSMNS--RSTRAVLLAKQLAVERKWTIT 403

Query: 725 GTPTPNTPNSQLSHLQP--------------------MLKFLHEEAYGQNQKAWDGGILR 764
           GTPT    N  +   +                     +  +L  E +  N K W   +++
Sbjct: 404 GTPTLGLTNLHVEETEEDYTIKRKFNARDDLVKLGTVVSNYLKVEPWSTNPKLWLNNVIK 463

Query: 765 PFEAEMEEGRSRLLQLLHRCMISARKTDLQ 794
           PFE     G  +L+Q+L   ++     D++
Sbjct: 464 PFENNSLNGDHQLMQILQNLLVRHSVKDVE 493



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPM----HSSNKIKSLDMFRH 1039
            L  N+ +  K I+F +F    + + + L + G+ +  MYS        SN +   D++  
Sbjct: 815  LLENQTVGIKSIVFYEFENSAYYLTELLDLLGMNYL-MYSTYVKIAERSNNLTKFDLWDT 873

Query: 1040 DASC-LALLMDGS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
              S  + L+MD   AS GL +   T VF + PIW++++E Q I R+HR+G T+ ++VETL
Sbjct: 874  SVSGGIVLVMDVKLASHGLTIISATNVFFLNPIWNKTVEAQAIKRSHRIGQTKEVYVETL 933

Query: 1098 AMRGTVEEQM 1107
             +  T+E++M
Sbjct: 934  ILDNTIEKEM 943


>gi|403165997|ref|XP_003325910.2| hypothetical protein PGTG_07740 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|375166027|gb|EFP81491.2| hypothetical protein PGTG_07740 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1481

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 19/192 (9%)

Query: 954  VPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD-----------KVIIFSQFLE 1002
            + Q +++L P  R    +  F  QD    N ESN   PD           K ++FSQ+ +
Sbjct: 1274 ISQLILDLLPFSRANPASANFAPQDPMF-NEESNPNDPDADFKPTKGAVVKSVVFSQWTK 1332

Query: 1003 HIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFV 1061
             +  I        I++  +   M  + + +S++  + D  C  LL+   +  +GL+L+  
Sbjct: 1333 LLDKIASAFDEFNIQYKKLDGTMSRAERNRSMEALKADPKCEVLLVSLRAGGVGLNLTCA 1392

Query: 1062 TRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF------LQDTD 1115
             RV+LMEP W+ ++E Q + R HR+G T+P+ +    + G+VE+ MLE       L +  
Sbjct: 1393 QRVYLMEPFWNPAVENQAVDRVHRLGQTKPVRMIRYIISGSVEQNMLEIQKRKTELANMS 1452

Query: 1116 RCRRLLKEELVK 1127
              + L KEEL K
Sbjct: 1453 LGQTLSKEELAK 1464



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 109/284 (38%), Gaps = 88/284 (30%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRP-----------------GQLHLFVWTDHKKPSAH 655
           SRATLIV P   V +W++QI++HVR                    L + V+  + + S  
Sbjct: 703 SRATLIVCPLSTVQNWESQIEEHVRKIPTPAADGSSSSSAPSKSSLSVCVYHGNGRTSDP 762

Query: 656 SLAWDYDVVITTFNRLSAEWGRRKK----------------------------------- 680
            +  D+DVVITT++ L  E+ R+ +                                   
Sbjct: 763 HVLADHDVVITTYSLLGYEFSRQNRVIKEAEDGNESSDGVEEVDAEGGSIQILNGNPEKT 822

Query: 681 ------------------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
                             SP+  V W RV+LDE H +    + T + + A  L A  R  
Sbjct: 823 QAKSRGKLKRKRKGDGLLSPLQAVEWFRVVLDEAHMIKE--HTTTQSKAACDLLAERRVC 880

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           LTGTP  N+ N   S    ++ FL  E +  ++  W   I  P       G SR LQL+ 
Sbjct: 881 LTGTPLQNSLNDLFS----LVCFLRLEPF-TDRAVWTTHIGHPARLGEPLGVSR-LQLIM 934

Query: 783 RCMISARKTD---------LQTIPLCIKEVTFLNFTEEHAGTYN 817
           R  I+ R+T          + T+P    ++ +L   E     Y+
Sbjct: 935 R-HIALRRTKQSSDKHGKPILTLPPKKDDIVYLELNETEKEFYS 977


>gi|317031266|ref|XP_001393115.2| SWI/SNF family DNA-dependent ATPase Ris1 [Aspergillus niger CBS
           513.88]
          Length = 1136

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 116/252 (46%), Gaps = 40/252 (15%)

Query: 599 LALCEPLDSVRLYLSRA--------TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH- 649
           + L + + ++ L +SR         TLI+ P  LV  WK +I++ VRPG+  L +W  H 
Sbjct: 471 MGLGKTIQAIALIVSRPSTDPERKPTLIIAPVALVQQWKREIERMVRPGKHQLSIWVLHG 530

Query: 650 -KKPSAHSLAWDYDVVITTFNRLSAEWGRRKKS--------PMM--QVHWLRVMLDEGHT 698
            K+ +       YDVV+TTF  L+AE  R++K         P++  +  W RV+ DE   
Sbjct: 531 DKRLTTFRELKRYDVVLTTFGTLAAELKRKQKYEEKALDSLPLLGRRCKWYRVIADEAQC 590

Query: 699 LGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKA 757
           +    N   K  +A   L  + RW +TGTP  N     +  L  ++KFL    Y  N + 
Sbjct: 591 IK---NRNAKAALACCQLNTTYRWCMTGTPMMNN----VEELHSLIKFLRIRPYC-NIET 642

Query: 758 WDGGILRPFEAE--MEEGRSRLLQLLHRCMISAR--------KTDLQTIPLCIKEVTFLN 807
           ++    RP ++   M E     LQ+L + ++  R        K  LQ +P  + E     
Sbjct: 643 FNRDFTRPLKSSPAMREKAMLQLQVLLKAILLRRTKSSEIDGKPILQ-LPPKVSERVHAV 701

Query: 808 FTEEHAGTYNEL 819
           F+EE    YN L
Sbjct: 702 FSEEEQEFYNAL 713



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K IIFSQF   + ++E  +   G  +      M  +++  S+  F  +  C  +L+   
Sbjct: 981  EKTIIFSQFTSLLDLLEIPIARQGWDYRRYDGSMRPADRNTSVMDFTDNEDCRIMLVSLK 1040

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + + GL+L   ++V + +P W+  +EEQ + RAHR+G  RP+ +  + ++ TVE+++LE 
Sbjct: 1041 AGNAGLNLVAASQVIIFDPFWNPYVEEQAVDRAHRIGQVRPVQIHRIVVKDTVEDRILE- 1099

Query: 1111 LQDTDR 1116
            LQD  R
Sbjct: 1100 LQDKKR 1105


>gi|443896475|dbj|GAC73819.1| helicase-like transcription factor HLTF [Pseudozyma antarctica T-34]
          Length = 1655

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 79/142 (55%), Gaps = 6/142 (4%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FSQ+ + +  I++ +++ GI+ A +   M  +++  +L+ F+ D     LL+  
Sbjct: 1485 PIKSVVFSQWTKMLDRIQKSMSITGIRMARLDGSMKRADRSAALEAFKTDPGIEVLLVSL 1544

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +   GL+L    R +LM+P W+ ++E Q + R HRMG TRP+      MR ++EE ML 
Sbjct: 1545 RAGGTGLNLVSACRAYLMDPYWNPAVENQGLDRVHRMGQTRPVITTKYIMRHSIEENMLR 1604

Query: 1110 FLQDTDRCRRLLKEELVKPERE 1131
              +     R+++  E V  +R+
Sbjct: 1605 LQK-----RKMMLAEKVGSKRQ 1621



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 106/256 (41%), Gaps = 49/256 (19%)

Query: 677  RRKK------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
            RR+K      +P+ ++ W RV+LDE H +  +L   +K   A +LTA  R  LTGTP  N
Sbjct: 955  RRRKPAKEAYNPLQRIEWFRVVLDEAHQIKGALTWQSK--AACNLTAQRRLCLTGTPIQN 1012

Query: 731  TPNSQLSHLQPMLKFL----------------HEEAYGQNQKAWDGGILRPFEAEMEEGR 774
            T    +  L  ++KFL                H E+ G   K  D     P ++      
Sbjct: 1013 T----IDDLFALVKFLRLDPFTERAMWNEFCGHRESTGLKSKKDD----EPIDSANLGHV 1064

Query: 775  SRLLQLL----HRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMA 830
              L++ L     +   +A    L  +P  + +  +L+F E     Y  L      N+   
Sbjct: 1065 QILMKFLALRRQKTTKTADGKPLLALPPKLSKTEYLDFEEAEKARYQAL-----HNLYRE 1119

Query: 831  DWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQET---MDVLVENG 887
            D+ +    +++ N   +    T I NLR++C    H  + DA +D +      D+     
Sbjct: 1120 DFEEMMAKDTVNN--NYATILTEILNLRMTC---DHPSLVDASKDARRRAAGADLSEAIK 1174

Query: 888  LDPLSQEYAFIKYNLL 903
             D LS+E A I + L 
Sbjct: 1175 QDGLSRERAAILFLLF 1190



 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 21/75 (28%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS---------AHSLAW--DY 661
           SRATLIV P  ++ +W+ Q ++H          WT  K+PS         A +  W  ++
Sbjct: 833 SRATLIVCPLSVISNWEEQFKEH----------WTRRKRPSIYIYHGPSRATNAKWIANH 882

Query: 662 DVVITTFNRLSAEWG 676
           D+V+TT++ L +E+ 
Sbjct: 883 DIVLTTYSTLGSEFA 897


>gi|302753908|ref|XP_002960378.1| hypothetical protein SELMODRAFT_73550 [Selaginella moellendorffii]
 gi|300171317|gb|EFJ37917.1| hypothetical protein SELMODRAFT_73550 [Selaginella moellendorffii]
          Length = 159

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/118 (34%), Positives = 71/118 (60%), Gaps = 2/118 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K +IFSQ+   +++IE +L  AGI+F+ +   M +  ++ ++  F  D   + +L+  S
Sbjct: 6    EKSLIFSQWTSMLNLIEPELEGAGIQFSRIDGSMSAGKRVAAIKRFSEDPDVVVMLI--S 63

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
               GL+L   + V LM+  W+ + E+Q I R HR+G TRP+HV    ++ TV+E +LE
Sbjct: 64   LRAGLNLVAASHVLLMDMWWNPTTEDQAIDRTHRIGQTRPVHVTRFVVKQTVQEHVLE 121


>gi|448113879|ref|XP_004202440.1| Piso0_001275 [Millerozyma farinosa CBS 7064]
 gi|359383308|emb|CCE79224.1| Piso0_001275 [Millerozyma farinosa CBS 7064]
          Length = 1297

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 75/120 (62%), Gaps = 5/120 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR-HDASC---LALLM 1048
            K I+F +F +  + + + L V G+++    + + S  + K+LD+F+ H+      +AL+M
Sbjct: 1033 KSIVFFEFEDSAYYLTELLDVVGVEYILYATSITSDERAKNLDLFKFHNEKTEGGIALVM 1092

Query: 1049 DGS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            D   A+ GL +   TRV+ + P+W+R  E Q I RAHR+G  + ++VETL ++GT+EE++
Sbjct: 1093 DLKLAAQGLTIIAATRVYFINPVWERYKEAQAIKRAHRIGQKKDVYVETLVLKGTLEEEI 1152



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 48/223 (21%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA-------HSLAWD-- 660
           LYL   T+I+VP  L++ W+ +IQ+HV  G L +   + + K S        +S+  D  
Sbjct: 493 LYLCHTTIIIVPDNLLNQWRDEIQKHVIKGFLSILYLSRNLKNSEIENEHFRNSVPQDLR 552

Query: 661 ----YDVVITTFNRLSAEWGRRKKSPMM--QVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
               +DV+I T + +S  +   + S  +   V+W R+++DEGH++ S  N  N + +  +
Sbjct: 553 ELIKFDVIIITQSLISKYYSEPESSGYILDSVYWKRLIIDEGHSVNSR-NSRNSI-ICKN 610

Query: 715 LTASNRWLLTGTPTPNTPNSQL-----------SHL--QPMLK----------------- 744
           L +  RW +TGTPT    N  +           SH   Q ++K                 
Sbjct: 611 LYSERRWAVTGTPTSGLTNLHMDEQDDDSDVSKSHKKSQYVIKSKFNERDDLTKLGVIIG 670

Query: 745 -FLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
            FL  E +G   K W   I++PF ++      RLL LL+  M+
Sbjct: 671 DFLKIEPFGSCPKLWSSAIMKPFMSDKFSSAVRLLNLLNEIMV 713


>gi|403158681|ref|XP_003319387.2| hypothetical protein PGTG_01561 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|375166412|gb|EFP74968.2| hypothetical protein PGTG_01561 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 362

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            + +IFS+F   + +IE  L   GI+F   Y  M +  + K+L+ FR D SC  LL    +
Sbjct: 210  RAVIFSEFKRFLQIIEIALNERGIQFTTHYGKMDNDTRRKNLEYFRRDVSCKVLLATIKT 269

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A +G+DL    +V+LMEP W+ ++EEQ I R +R+G    + V    ++ ++E  + + 
Sbjct: 270  AGVGIDLRCAHKVYLMEPTWNPAVEEQAIDRLYRIGQKERVQVVRYCIKNSIEGHIFQI 328



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 686 VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKF 745
           + W R++LDE H +      TN+    + L A  R  L+GTP  N    QL  L  ++KF
Sbjct: 9   IEWFRIVLDEAHYMKDP--KTNRSISLLGLKAQRRLCLSGTPLQN----QLGDLHNLIKF 62

Query: 746 LHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIP 797
           L  E +  N   W   +  P +    +G   L  ++    +   KT +  +P
Sbjct: 63  LQIEPW-TNNSIWKQCVEGPVQLGNPQGILTLQSIMKGISMRRLKTTVLDLP 113


>gi|389601922|ref|XP_001566230.2| DNA repair protein-like protein [Leishmania braziliensis
            MHOM/BR/75/M2904]
 gi|322505242|emb|CAM39730.2| DNA repair protein-like protein [Leishmania braziliensis
            MHOM/BR/75/M2904]
          Length = 1288

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 16/173 (9%)

Query: 947  NPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALP--DKVIIFSQFLEHI 1004
             P P+ P+  DL ++     Q S+   +L        ++  ++LP  DKV++FS FL ++
Sbjct: 1062 EPAPEVPLNLDLTDMSNWGLQLSSKTQYL--------IDKIRSLPADDKVVVFSTFLTYL 1113

Query: 1005 HVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA-----LLMDGSASLGLDLS 1059
               +  L  AG+  A     M    K   L++F HDA+  A     L    S  +GL+L+
Sbjct: 1114 RCAQHWLQAAGVSSAVYTGSMTMKQKHSLLELF-HDATQPASPRVLLATTSSCGVGLNLT 1172

Query: 1060 FVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
                 FLMEP W+   EEQ ++R HR+G T+P+ +  L   GT+E+ + +  +
Sbjct: 1173 CANHCFLMEPSWNPGTEEQALNRIHRIGQTKPVTITKLIADGTIEQNISQLCE 1225



 Score = 51.2 bits (121), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 83/207 (40%), Gaps = 65/207 (31%)

Query: 599 LALCEP-----LDSV--RLYLSRATLIVVPSYLVDHWKTQIQQHVR-----PGQLHLFVW 646
           +ALCE      +D V   L  S ATLIV P+ L+  W  +I + V      P ++ L+  
Sbjct: 568 IALCEATRVPRIDRVTGSLVESAATLIVCPTSLLTQWVREIHRCVERPATAPLRILLYYG 627

Query: 647 TDHKKPSAHSLAWDYDVVITTF----------NRLSAEWGRRKKSPMMQ----------- 685
              ++ S   +A  YD V+TT+          +R    +     SP M            
Sbjct: 628 ARPRRLSLFQVAQSYDYVLTTYQTLCHKQPPASRFEPTYASGGASPTMSADISGVDDAVA 687

Query: 686 --------------------------VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
                                     + W R++LDE H + +    T++ +  + L+   
Sbjct: 688 GSSLPANVDDYDVDRRLQTEVDKLFMIRWARIILDEAHYIRN--MRTHQSRACLKLSGVC 745

Query: 720 RWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           RW++T TP  N+    L+ L P+L+FL
Sbjct: 746 RWVVTATPVQNS----LNDLYPLLRFL 768


>gi|255932145|ref|XP_002557629.1| Pc12g07960 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582248|emb|CAP80423.1| Pc12g07960 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 937

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 21/189 (11%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           +TL++ P  L+  W+ +I+  V    +L + ++    +    +    YDVVITT+  L++
Sbjct: 342 STLVIAPLALIKQWEAEIKDKVETSHKLRVCLYHGTTREKTSTTLDKYDVVITTYGTLTS 401

Query: 674 EWG-----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           E+      + KK+ +  VHW R++LDE HT+ +        Q A +L A  RW LTGTP 
Sbjct: 402 EFNSSASDKAKKAGIFAVHWYRIILDEAHTIKN--RNAKATQSAYALDAQYRWCLTGTPL 459

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLHRC 784
            N     L  LQ ++KFL  + Y +   AW   I RP    +  GR  L    LQ+  + 
Sbjct: 460 QN----NLDELQSLIKFLRVKPYDE-LAAWRDQISRP----LNNGRGGLAIQRLQVYLKA 510

Query: 785 MISARKTDL 793
            +  R  D+
Sbjct: 511 FMKRRTKDV 519



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 3/132 (2%)

Query: 987  NKALPD-KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
            N+  PD K I+FS F   +  IE  L  A I FA     M ++++  SL+  R+++    
Sbjct: 714  NREAPDFKFIVFSVFTSMLDKIEPFLKTANIGFARYDGGMANNHREASLEKLRNNSGTRV 773

Query: 1046 LLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            LL    + +LGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  + ++GTVE
Sbjct: 774  LLCSLRAGALGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTIDVKIYKMVIKGTVE 833

Query: 1105 EQMLEFLQDTDR 1116
            E+++  LQD  R
Sbjct: 834  ERIVA-LQDRKR 844


>gi|388858245|emb|CCF48174.1| related to RAD16-nucleotide excision repair protein [Ustilago hordei]
          Length = 1646

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 80/142 (56%), Gaps = 6/142 (4%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FSQ+ + +  I++ L + GI+ A +   M  S++  +L+ F+++ +   LL+  
Sbjct: 1476 PVKSVVFSQWTKMLDRIQKSLKITGIRVARLDGTMKRSDRSAALESFKNNPTIEVLLVSL 1535

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +   GL+L    R +LM+P W+ ++E Q + R HRMG TRP+      MR ++EE ML 
Sbjct: 1536 RAGGTGLNLVSACRAYLMDPYWNPAVENQGLDRVHRMGQTRPVITTKYIMRHSIEENMLR 1595

Query: 1110 FLQDTDRCRRLLKEELVKPERE 1131
              +     R+++  E V  +R+
Sbjct: 1596 LQK-----RKMMLAEKVGSKRQ 1612



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 108/266 (40%), Gaps = 40/266 (15%)

Query: 681  SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
            +P+  + W R++LDE H +  +    +K     +L+A  R  LTGTP  NT N   +   
Sbjct: 944  NPLQHIEWFRIVLDEAHIIKGAGTWQSK--AVCNLSAQRRLCLTGTPIQNTINDLFA--- 998

Query: 741  PMLKFL----------------HEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL-LHR 783
             ++KFL                H+E++G   K  D   + P      +   + L L   +
Sbjct: 999  -LVKFLRLDPFTDRAIWNEFCGHKESHGLKSKGKDDEPIDPANLGHVQILMKFLALRRQK 1057

Query: 784  CMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI--LMADWNDPSHVESL 841
               +A    L T+P  + +  +L+F E     Y  L    R     +MA     ++  ++
Sbjct: 1058 TTKTADGKQLLTLPPKLSKTEYLDFEETEKARYQALHNRYREEFEEMMAGDTVNNNYATI 1117

Query: 842  LNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQET---MDVLVENGLDPLSQEYAFI 898
            L+          I NLR++C    H  + DAG+D +      D+      D LS+E A I
Sbjct: 1118 LH---------EILNLRMTC---DHPSMVDAGKDAKRMSAGADLSEAIKQDGLSRERAAI 1165

Query: 899  KYNLLNGGNCLRHILCLDCVAMDSEK 924
             + L           C   ++M +++
Sbjct: 1166 LFILFRDSEMAYCSECQSDLSMSADR 1191



 Score = 43.9 bits (102), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 44/66 (66%), Gaps = 5/66 (7%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQH-VRPGQLHLFVWTDHKKPSAHSLAW--DYDVVITTFN 669
           +RATLIV P  ++ +W+ QI++H  R  +  ++++  H    ++S+ W  ++D+V+TT++
Sbjct: 809 TRATLIVCPLSVISNWEEQIKEHWARKKRPSVYIY--HGSSRSNSVKWIANHDIVLTTYS 866

Query: 670 RLSAEW 675
            L +E+
Sbjct: 867 TLGSEF 872


>gi|315050848|ref|XP_003174798.1| transcription termination factor 2 [Arthroderma gypseum CBS 118893]
 gi|311340113|gb|EFQ99315.1| transcription termination factor 2 [Arthroderma gypseum CBS 118893]
          Length = 1164

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 12/207 (5%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           L  ++ TL+V P   V +W +QI++HV+   L  +V+    +         YDVVITT+ 
Sbjct: 582 LINAKTTLLVSPLSAVGNWVSQIKEHVKDDALSFYVFHGPSRTEDPRELAKYDVVITTYT 641

Query: 670 RL----SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTG 725
            +    S +  +R  SP+++++  R++LDE H +        + Q    L A  RW +TG
Sbjct: 642 TILSDVSGKSSKRGTSPLVRMNMFRIVLDEAHIIRE--QNAAQSQAIFQLNAQRRWSVTG 699

Query: 726 TPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCM 785
           TP  N    +L  L  +LKFL    Y +  + +   I+ PF+ E     + L  L+    
Sbjct: 700 TPIQN----RLEDLGAVLKFLRLSPYDERGR-FAAHIVSPFKTENPSAITNLRVLVDSFT 754

Query: 786 ISARKTDLQTIPLCIKEVTFLNFTEEH 812
           +  R  D   +P    +   LNFTE+ 
Sbjct: 755 LR-RVKDRINLPPRHDKTVMLNFTEQE 780



 Score = 63.9 bits (154), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDM 1036
            D    N +S+   P K +IFS +  H+ +IE  L    +  F  +   M    +  S++ 
Sbjct: 996  DTAEDNKKSSCQPPIKSVIFSAWTSHLDLIEVALEENKLTGFTRLDGTMSLKQRNASIET 1055

Query: 1037 FRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            F  D S   LL+  G+  +GL+L+  + V++MEP ++ +   Q + R HR+G  R +   
Sbjct: 1056 FSTDDSVTILLVTIGAGGVGLNLTAGSIVYIMEPQYNPAAIAQAVDRVHRIGQKREVTTI 1115

Query: 1096 TLAMRGTVEEQMLEF------LQDTDRCRRLLKEELVKPEREGARS 1135
               M  ++EE++ E       L D    R++ + EL K   E  RS
Sbjct: 1116 QFIMNDSIEEKITELAKRKQKLADMSLNRKMDRRELQKERLEEYRS 1161


>gi|320590298|gb|EFX02741.1| snf2 family helicase [Grosmannia clavigera kw1407]
          Length = 1240

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 1/124 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FS +  H+ +IE+ L   GI F  +   M  + + +++D FR D S   +L+  
Sbjct: 1085 PIKSVVFSGWTSHLDLIERALRDNGIAFCRLDGKMSRTARTQAMDTFRDDPSVHVILVSI 1144

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  LGL+L+    V++MEP ++ + E Q I R HR+G  RP+H     M  + EE+MLE
Sbjct: 1145 MAGGLGLNLTAGNYVYVMEPQYNPAAEAQAIDRVHRLGQKRPVHTVRFIMNRSFEERMLE 1204

Query: 1110 FLQD 1113
               D
Sbjct: 1205 IQAD 1208



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 118/285 (41%), Gaps = 30/285 (10%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           R TL+V P   + +W+ Q++QH+    L   V+    +    +   ++D+VITT+  +S+
Sbjct: 620 RGTLLVCPLSTITNWEEQVKQHLAADALSFHVYHGQNRIKDVAQLSEFDLVITTYGSVSS 679

Query: 674 EWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           E   R +      P+ ++ W R++LDE H +     L  + +    L AS RW +TGTP 
Sbjct: 680 ELTARNRGKAGPFPLEEIGWFRIVLDEAHMIREPSTL--QFKAITRLQASRRWAVTGTPV 737

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
            N    +L  L  +L FL  + +  ++  +   I+  F A  +      L++L   +   
Sbjct: 738 QN----RLEDLGSLLSFLRLQPF-HDRAKFAHHIVNRFRA-CDPDVLPQLRILVDTITLR 791

Query: 789 RKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWND-----PSHVESLLN 843
           R  D   +P        L+F  +    Y         +    D ND      S  E LL 
Sbjct: 792 RLKDKIDLPPRTDVTMRLDFAADEKEIY---------DFFERDANDRVKALTSQSERLLG 842

Query: 844 PKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGL 888
            K +      I  LRL C    H K     +D+Q    V  E  L
Sbjct: 843 GKTYIHILQAILRLRLICA---HGKDLLGDDDLQRMQTVQRETEL 884


>gi|325089926|gb|EGC43236.1| SNF2 family helicase [Ajellomyces capsulatus H88]
          Length = 1211

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 86/155 (55%), Gaps = 8/155 (5%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +       I + L + G++F    + + +  + + L +F    +   LLMD  
Sbjct: 932  EKIIIFYEGNNTGFYIAEGLELLGVEFRIYANTLKTKTRSEYLSLFNETETVRVLLMDLR 991

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             A+ GL ++  +RVF++ PIWD + E Q I RAHR+   +P++VETL ++GT+E++ML  
Sbjct: 992  QAAHGLHIACASRVFIVNPIWDPNFESQAIKRAHRISQNKPVYVETLVLKGTLEDRMLR- 1050

Query: 1111 LQDTDRCRRLLKEELVKPEREGARSHRTLHDFAES 1145
                 R +++   EL   E++     RT+ D  ++
Sbjct: 1051 -----RRKQMSNAELRHAEKD-PLDDRTMSDIIQT 1079



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 19/136 (13%)

Query: 607 SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK--KPSAHSLAWDYDVV 664
           + +L L   TLI+VPS LVDHW ++I +H +   L + V  D +   P    L  +YD++
Sbjct: 424 ATKLQLCSGTLIIVPSNLVDHWLSEIDKHTQ--GLKVLVLRDSRCATPQPEQL-LEYDII 480

Query: 665 ITTFNRLSAEW---GRR---------KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
           +  F++   EW   GRR         ++SP+ ++HWLRV++DEGH   +    +      
Sbjct: 481 L--FSKPRFEWEAGGRRSSGLSMEPTEESPLKKLHWLRVIVDEGHNFAAKGGRSTAAHTL 538

Query: 713 ISLTASNRWLLTGTPT 728
             L    RW+++GTP+
Sbjct: 539 GQLHIERRWVVSGTPS 554


>gi|398403923|ref|XP_003853428.1| SNF2 family DNA-dependent ATPase domain-containing protein
            [Zymoseptoria tritici IPO323]
 gi|339473310|gb|EGP88404.1| SNF2 family DNA-dependent ATPase domain-containing protein
            [Zymoseptoria tritici IPO323]
          Length = 998

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 987  NKALPD-KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA 1045
            +K  PD KVI+FSQF   + +IE  L    ++F      M    + +SL+  R DA    
Sbjct: 770  HKETPDHKVIVFSQFTTMLDLIEPHLKATNMRFVRYDGSMRPDAREQSLNSLRSDAKTRI 829

Query: 1046 LLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
            LL      SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L +R +VE
Sbjct: 830  LLCSLKCGSLGLNLTAASRVVIVEPFWNPFVEEQAIDRVHRLNQTIDVRVFRLKIRNSVE 889

Query: 1105 EQMLEFLQDTDR 1116
            E++LE LQ+  R
Sbjct: 890  ERILE-LQEKKR 900



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 23/194 (11%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TL+V P  L+  W+ +I+  V R   L + V     +  + +    YDVVITTF  
Sbjct: 322 IGKGTLVVAPLALIKQWEAEIKSKVTRSHALKVLVHHGPSRTKSSAELKKYDVVITTFQT 381

Query: 671 LSAEWGRRKKSPM-------MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
           L++E      +           V+W R+MLDE H++ +        Q   +L    RW L
Sbjct: 382 LTSEHAGSNMTVTGGSRIGCFGVNWYRIMLDEAHSIKN--RNAKSTQACYALEGYYRWCL 439

Query: 724 TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQ 779
           TGTP  N     L  LQ +++FL  + Y +   AW   I  P    M+ GR     R LQ
Sbjct: 440 TGTPLQNN----LDELQSLIRFLRIKPYCE-LPAWKDAITTP----MKSGRGGLAMRRLQ 490

Query: 780 LLHRCMISARKTDL 793
           +  +  +  R  D+
Sbjct: 491 IFLKAFMKRRTKDI 504


>gi|380494799|emb|CCF32876.1| SNF2 super family protein [Colletotrichum higginsianum]
          Length = 944

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 107/239 (44%), Gaps = 28/239 (11%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTF 668
           + + TL+V P  L+  W+++I++ V   + H      H  P       D   YDVV+TT+
Sbjct: 183 IEKTTLVVAPLALIRQWESEIKEKV--AKTHGLNVCVHHGPQRTKRFKDLAAYDVVVTTY 240

Query: 669 NRLSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
             L +EWG         K+    +HW RV+LDE HT+ +    + K     +L +  RW 
Sbjct: 241 QVLVSEWGHSSEDENGVKAGCFGLHWWRVVLDEAHTIKNRNAKSTK--ACYALRSEYRWC 298

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           L+GTP  N     L  LQ ++KFL  + Y  + K W   I +P +        R L  L 
Sbjct: 299 LSGTPMQNN----LEELQSLIKFLRIKPY-DDLKEWKEQIEKPLKNGKGHVAIRRLHSLL 353

Query: 783 RCMISARKTDLQTIPLCIKEVTFLN----FTEEHAGTYNELVVTVRRNILMADWNDPSH 837
           RC +  R  D+      +KE   LN     T+E   +     VT R+ + +A    P+ 
Sbjct: 354 RCFMKRRTKDI------LKEEGALNPGGKPTKEGEKSSTGFKVTERKVVTVATTFSPAE 406



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 5/136 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE      G KF      M +  +  SL   R+D +   LL     
Sbjct: 736  KFIVFSQFTSMMDLIEPFFRKEGFKFTRYDGSMKNDEREASLHRLRNDNNTRILLCSLKC 795

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +  TVEE++L   
Sbjct: 796  GSLGLNLTAATRVIILEPFWNPFVEEQAIDRVHRLTQTVDVIVYKLTVEKTVEERILALQ 855

Query: 1112 QDTDRCRRLLKEELVK 1127
            +     +RLL E  ++
Sbjct: 856  EK----KRLLAETAIE 867


>gi|440636222|gb|ELR06141.1| hypothetical protein GMDG_02015 [Geomyces destructans 20631-21]
          Length = 1211

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)

Query: 585 KTLDNLAFDLAALRLALCEPLDSVRLY---LSRATLIVVPSYLVDHWKTQIQQHVRPGQ- 640
           KTL +++  L   R +  +  D  R +   + + TL+V P  L+  W+ +I+  V P   
Sbjct: 452 KTLQSISLILTNPRPSGSDLEDGKRKFPSSMQKCTLVVAPLALIRQWELEIKDKVLPSHA 511

Query: 641 LHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKK-SPMMQV-----HWLRVMLD 694
           L ++V    ++   H+   +YDVV+TT+  L +E+G   + S  ++V     HW RV+LD
Sbjct: 512 LRVYVHHGPQRTKNHNDLKNYDVVVTTYQILVSEFGNSSQDSEGIKVGCFGLHWYRVILD 571

Query: 695 EGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQN 754
           E HT+ +        Q   +L +  RW LTGTP  N     L  LQ ++KFL  + Y  +
Sbjct: 572 EAHTIKN--RNAKATQACYALRSEYRWCLTGTPMQNN----LDELQSLIKFLRIKPY-DD 624

Query: 755 QKAWDGGILRPFEAEMEEGR 774
            K W   I RP    M+ GR
Sbjct: 625 LKQWKDQIDRP----MKNGR 640



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE  L   G K+      M +  +  SL M R + SC  LL     
Sbjct: 996  KFIVFSQFTSMLDLIEPFLQRDGYKYTRYDGSMRNDLREASLKMLREEKSCRILLCSLKC 1055

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+     + V  + +  +VEE++LE L
Sbjct: 1056 GSLGLNLTAATRVVILEPFWNPFVEEQAIDRVHRLTQKIDVIVYKITIADSVEERILE-L 1114

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 1115 QEKKR 1119


>gi|70993794|ref|XP_751744.1| SNF2 family helicase [Aspergillus fumigatus Af293]
 gi|66849378|gb|EAL89706.1| SNF2 family helicase, putative [Aspergillus fumigatus Af293]
 gi|159125336|gb|EDP50453.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163]
          Length = 1180

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 69/119 (57%), Gaps = 1/119 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF         I + L + GI++    S +    +   L++FR        LMD  
Sbjct: 905  EKIIIFYDSTNSGVWIAEGLDLLGIEYRMYASTLSPELRTSYLNLFRESEEIRVFLMDLH 964

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             AS GL ++  +RVF + PIW  ++E Q I RAHR+G TRP++VETL ++ T+E++ML+
Sbjct: 965  QASHGLHIANASRVFFVNPIWQPNVESQAIKRAHRIGQTRPVYVETLVLKDTLEDKMLK 1023



 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 12/128 (9%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           L+  TLIVVP  LVDHW+ QI +H +  ++ +     +  P++  L   YD+++ +  R 
Sbjct: 409 LTSGTLIVVPPNLVDHWEEQIARHSQGLKVLVLRNMSNATPNSDDL-LQYDIILFSRWRF 467

Query: 672 SAEWG-----RRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
             E G     RR       +SP+  +HWLR+++DEGH +  S   +    +   L    R
Sbjct: 468 DQEAGEAVNNRRGVFNNTMESPLFSLHWLRIIIDEGHNVAGSSQTSRTRYLLDKLHIERR 527

Query: 721 WLLTGTPT 728
           W+++GTP+
Sbjct: 528 WIVSGTPS 535


>gi|119500356|ref|XP_001266935.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181]
 gi|119415100|gb|EAW25038.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181]
          Length = 1181

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 80/141 (56%), Gaps = 7/141 (4%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF         I + L + GI++    S +    +   L++FR        LMD  
Sbjct: 906  EKIIIFYDSTNSGVWIAEGLDLLGIEYRMYASTLSPELRTSYLNLFRESEEIRVFLMDLH 965

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             AS GL ++  +RVF + PIW  ++E Q I RAHR+G TRP++VETL ++ T+E++ML+ 
Sbjct: 966  QASHGLHIANASRVFFVNPIWQPNVESQAIKRAHRIGQTRPVYVETLVLKDTLEDKMLK- 1024

Query: 1111 LQDTDRCRRLLKEELVKPERE 1131
                 R + + ++E+ + E++
Sbjct: 1025 -----RRKAMSEKEMQEAEKD 1040



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 11/127 (8%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           L+  TLIVVP  LVDHW+ QI QH +  ++ +     +  P++  L   YD+++ +  R 
Sbjct: 411 LTSGTLIVVPPNLVDHWEEQIAQHSQGLKVLVLRNMSNATPNSDDL-LQYDIILFSRWRF 469

Query: 672 SAEWG-----RRK-----KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRW 721
             E G     RR      +SP+  +HWLR+++DEGH +  S   +    +        RW
Sbjct: 470 DQEAGEAVNNRRGVIDTVESPLFSLHWLRIIIDEGHNVAGSSQTSRTRYLLDKFHIERRW 529

Query: 722 LLTGTPT 728
           +++GTP+
Sbjct: 530 IVSGTPS 536


>gi|400600280|gb|EJP67954.1| SNF2 family domain-containing protein [Beauveria bassiana ARSEF 2860]
          Length = 1028

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 5/135 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE  +   G KF      M +  + +SL   R D +C  LL     
Sbjct: 831  KFIVFSQFTSMLDLIEPFIRKDGFKFTRYDGSMRNDEREESLRRLREDKNCRVLLCSLKC 890

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +  TVEE++++ L
Sbjct: 891  GSLGLNLTAATRVVIVEPFWNPFVEEQAIDRVHRLNQTVDVIVYKLTVAKTVEERIID-L 949

Query: 1112 QDTDRCRRLLKEELV 1126
            QD    +RLL E+ +
Sbjct: 950  QDK---KRLLAEQAI 961



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 20/190 (10%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           + TL+V P  L+  W+ +I   V     L + V    ++         Y+VVITT+  L 
Sbjct: 270 KTTLVVAPLALIRQWEHEINDKVEKATGLKVHVHHGPQRTKNFKDLLKYNVVITTYQILV 329

Query: 673 AEWGRR------KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           ++ G        KK+      W RV+LDE HT+ +    + K     +L +  RW LTGT
Sbjct: 330 SDHGNSSEAEDGKKTGCFGPMWWRVVLDEAHTIKNRNAKSTK--ACYALRSEYRWCLTGT 387

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF---EAEMEEGRSRLLQLLHR 783
           P  N     L  LQ +++FL  + Y +  + W   I +P    +  +  GR   L  + +
Sbjct: 388 PMQNN----LDELQSLIRFLRIKPYDE-LRQWKDHIDQPLKNGKGHIAIGR---LHSVLQ 439

Query: 784 CMISARKTDL 793
           C +  R  D+
Sbjct: 440 CFMKRRTKDI 449


>gi|398018226|ref|XP_003862294.1| DNA repair protein-like protein [Leishmania donovani]
 gi|322500523|emb|CBZ35600.1| DNA repair protein-like protein [Leishmania donovani]
          Length = 1265

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 19/185 (10%)

Query: 943  TRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALP--DKVIIFSQF 1000
            T P  P P+ P+  DL ++     Q S+   +L        +++ ++LP  DKV++FS F
Sbjct: 1037 TSPAEPAPEVPLHLDLSDMNNWSLQLSSKTQYL--------IDTIRSLPAEDKVVVFSSF 1088

Query: 1001 LEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA-----LLMDGSASLG 1055
            L ++   +  L  AG+  A     M    K   L++F HDA+  A     L    S  +G
Sbjct: 1089 LTYLRCAQHWLQAAGVSCALYSGSMTMKQKQSLLELF-HDAARPASPRVLLATISSCGVG 1147

Query: 1056 LDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTD 1115
            L+L+     FLMEP W+   EEQ ++R +R+G T+P+    L   GT+E+ + +     D
Sbjct: 1148 LNLTCANHCFLMEPSWNPGTEEQALNRIYRIGQTKPVTFTKLIADGTIEQNISQLC---D 1204

Query: 1116 RCRRL 1120
            R R L
Sbjct: 1205 RKRAL 1209


>gi|409083851|gb|EKM84208.1| hypothetical protein AGABI1DRAFT_67507 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1023

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  IE  L +  I++  +   M    + K+LD  ++D  C  LL+   +
Sbjct: 872  KTVVFSQWTSMLDKIEDALLIYKIRYDRLDGTMKREERSKALDTLKYDPGCEVLLVSLKA 931

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              +GL+L+   +V LM+P W+ ++E Q I R HR+G T+P+      ++G++EE ML+  
Sbjct: 932  GGVGLNLTAAQKVILMDPCWNPAVENQAIDRIHRLGQTKPVLSIKYIIQGSIEESMLKIQ 991

Query: 1112 QDTDR 1116
            +  +R
Sbjct: 992  ERKNR 996



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 9/117 (7%)

Query: 681 SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
           SP+  VHW RV+LDE H++  +   T   + +  L A  R  LTGTP  N    +L  + 
Sbjct: 459 SPLQSVHWFRVVLDEAHSIKET--QTVGCRASCDLIADRRLCLTGTPVQN----KLDDMF 512

Query: 741 PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIP 797
            ++KFL  + +  ++  W   I  P +    EG  RL  ++    I+ R+T     P
Sbjct: 513 ALIKFLRLKPF-DDKNIWTKYISAPAKFGQREGVLRLRTIM--ACITLRRTKESKTP 566


>gi|448101146|ref|XP_004199494.1| Piso0_001275 [Millerozyma farinosa CBS 7064]
 gi|359380916|emb|CCE81375.1| Piso0_001275 [Millerozyma farinosa CBS 7064]
          Length = 1300

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 73/120 (60%), Gaps = 5/120 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR----HDASCLALLM 1048
            K I+F +F +  + + + L V G+++    + + S  + K+LD+F+         +AL+M
Sbjct: 1036 KSIVFFEFEDSAYYLTELLDVVGVEYILYATSIASDERAKNLDLFKFYNEKTEGGIALVM 1095

Query: 1049 DGS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            D   A+ GL +   TRV+ + P+W+R  E Q I RAHR+G  + ++VETL ++GT+EE++
Sbjct: 1096 DLKLAAQGLTIIAATRVYFINPVWERYKEAQAIKRAHRIGQKKDVYVETLVLKGTLEEEI 1155



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 48/223 (21%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS-------AHSLAWD-- 660
           LYL   TLI+VP  L++ W+ +IQ+HV  G L +   + + K S        +S+  D  
Sbjct: 496 LYLCHTTLIIVPDNLLNQWRDEIQKHVIKGYLSILYLSRNLKNSEAENEHFKNSVPQDLR 555

Query: 661 ----YDVVITTFNRLSAEWGRRKKSPMM--QVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
               +DV+I T + +S  +   + S  +   V+W R+++DEGH++ S  N  N + +  +
Sbjct: 556 YLIKFDVIIITQSLISKYYSEPESSGYILDSVYWKRLIIDEGHSVNSR-NSRNSI-ICKN 613

Query: 715 LTASNRWLLTGTPTPNTPNSQL-----------SHL--QPMLK----------------- 744
           L +  RW +TGTPT    N  +           SH   Q ++K                 
Sbjct: 614 LYSERRWAVTGTPTSGLTNLHMDEQDDDSDVSKSHKKSQYVIKSKFNEKDDLAKLGVIIG 673

Query: 745 -FLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
            FL  E +G   K W   I++PF ++       LL LL+  M+
Sbjct: 674 DFLKIEPFGSCPKLWSSAIMKPFMSDKFSSAMSLLNLLNEIMV 716


>gi|242764399|ref|XP_002340764.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218723960|gb|EED23377.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 1045

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 18/189 (9%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TLIV P  L+  W+++I   + +  +L + V+    +    +   DYDVVITT+  
Sbjct: 344 VDKCTLIVAPLALIKQWESEIADKIEKTHKLRVCVYHGAGRTKFSADLKDYDVVITTYGT 403

Query: 671 LSAEWGRRKKSPM--MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           LS+E G   K  +    +HW RV+LDE HT+ +        Q A +L A  RW LTGTP 
Sbjct: 404 LSSEHGASGKGNVGCFNIHWYRVILDEAHTIKN--RNAKATQAACALNAQYRWCLTGTPL 461

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLHRC 784
            N     L  LQ ++KFL  + + +    W   I +P    +  GR  L    LQ+  + 
Sbjct: 462 QNN----LDELQSLIKFLRIKPFDE-LATWREQITQP----LNNGRGGLAIKRLQIFLKA 512

Query: 785 MISARKTDL 793
            +  R  D+
Sbjct: 513 FMKRRTKDV 521



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F + +  IE  L  A + +A     M +  +  SL+  R+ ++   LL    +
Sbjct: 824  KFIVFSVFTQMLDKIEPFLKRAKLGYARYDGSMRNDLREASLEKLRNHSNTRILLCSLRA 883

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             +LGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  + ++ TVEE++L+ L
Sbjct: 884  GALGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTIDVKIYKITIKNTVEERILD-L 942

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 943  QERKR 947


>gi|402082818|gb|EJT77836.1| transcription termination factor 2 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 1169

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 150/346 (43%), Gaps = 37/346 (10%)

Query: 601 LCEPLDSVRLYL-SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAW 659
           L EPL   RL + ++ TL+V P   + +W+ Q++QH++P  L  +++    + +      
Sbjct: 566 LPEPLGLTRLSINAKTTLLVCPLSTITNWEEQLKQHIKPKGLSYYIYHGQNRITDPIQLA 625

Query: 660 DYDVVITTFNRLSAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
            YD+V+TT+  +S+E   R K      P+ ++ W R++LDE H +     L  + + A  
Sbjct: 626 AYDLVLTTYGSVSSELTARNKRKVKQFPLEEIGWFRIVLDEAHMIREQGTL--QFKAACR 683

Query: 715 LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGR 774
           L AS RW +TGTP  N  +   + L  +     ++    NQ      I+ PF+    E  
Sbjct: 684 LQASRRWAVTGTPVQNRLDDLAALLAFLRLKPFDDRGRFNQH-----IVTPFKMADPEII 738

Query: 775 SRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWND 834
            +L  L+    +   K  +Q +P    EV  L F+ +    Y+      +  +     + 
Sbjct: 739 PKLRLLVDTVTLRRLKDKIQ-LPSRTDEVIKLTFSPDEQRLYDMFAKNAKDRVQALTGSR 797

Query: 835 PSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLD----- 889
               E +L  K +     +I  LRL C     + ++D  ED++    +  E+ +D     
Sbjct: 798 ----ERILGGKTYIHILQSILRLRLICAHGAEL-LSD--EDLKTVQGMTQESAIDLDSDE 850

Query: 890 -----PLSQEYAFIKYNLLNGGNCLRHILCL------DCVAMDSEK 924
                 L+   A   ++L+   N    ++C       D   M+SE+
Sbjct: 851 ESDKPTLTAAKAHSMFHLMKQTNSENCVMCQRKPGSNDGADMESER 896



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 69/119 (57%), Gaps = 1/119 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K +IFS +  H+ +IE  L  AGIK   +   M  + + +++D+FR D S   +L+  
Sbjct: 1012 PIKSVIFSGWTSHLDLIEIALDAAGIKHTRLDGKMSRTQRTQAMDVFRDDTSVEVILVSI 1071

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             +  LGL+L+  +RVF+MEP ++ + E Q + R HR+G  R +      M+ + EEQM+
Sbjct: 1072 MAGGLGLNLTAGSRVFVMEPQYNPAAEAQAVDRVHRLGQKRAVKTVRYIMKDSFEEQMV 1130


>gi|212529122|ref|XP_002144718.1| SNF2 family helicase/ATPase, putative [Talaromyces marneffei ATCC
           18224]
 gi|210074116|gb|EEA28203.1| SNF2 family helicase/ATPase, putative [Talaromyces marneffei ATCC
           18224]
          Length = 1043

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 18/187 (9%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           + TLIV P  L+  W+++I   + +  +L + V+    +    +   DYDVVITT+  LS
Sbjct: 339 KCTLIVAPLALIKQWESEIADKIEKTHKLRVCVYHGTGRTKFSADLKDYDVVITTYGTLS 398

Query: 673 AEWGRRKKSPM--MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
           +E     K  +    +HW R++LDE HT+ +        Q A +L A  RW LTGTP  N
Sbjct: 399 SEHAASGKGKVGCFNIHWYRIILDEAHTIKN--RNAKATQAACALNAQYRWCLTGTPLQN 456

Query: 731 TPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLLHRCMI 786
                L  LQ ++KFL  + Y +   AW   I +P    +  GR  L    LQ+  +  +
Sbjct: 457 N----LDELQSLIKFLRIKPYDE-LAAWREQITQP----LNNGRGGLAIKRLQVYLKAFM 507

Query: 787 SARKTDL 793
             R  D+
Sbjct: 508 KRRTKDV 514



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F + +  IE  L  A + +A     M +  +  SL+  R+ +S   LL    +
Sbjct: 823  KFIVFSVFTQMLDKIEPFLKRANLGYARYDGSMRNDLREASLEQLRNRSSTRVLLCSLRA 882

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             +LGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  + ++ TVEE++++ L
Sbjct: 883  GALGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTIDVKIYKITVKNTVEERIID-L 941

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 942  QERKR 946


>gi|145353728|ref|XP_001421157.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581393|gb|ABO99450.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1086

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K I+FSQ+   I ++E +L  A    A +   M  + +  +L  FR D +   +LM   
Sbjct: 934  NKAIVFSQYTAMIEIVEWRLKKAKFTIAKLLGSMPVTQRAANLQAFREDPNVSVILMSLK 993

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            S   GL+L     V+++EP W+ ++E Q + RAHR+G  RP+     + +GT+EE+M+E 
Sbjct: 994  SGGEGLNLQAANYVYVLEPWWNPAVEMQAVMRAHRIGQLRPVTAVRFSTKGTIEERMMEL 1053



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 36/73 (49%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW 675
           TL+VVP+  +  W+ +I+  V  G L +FV+   +          YDVV+TT+  + AEW
Sbjct: 220 TLVVVPTSALVQWEEEIKSCVEEGSLRVFVYYADRANVVEGDFKGYDVVLTTYPVVEAEW 279

Query: 676 GRRKKSPMMQVHW 688
            +     +    W
Sbjct: 280 RKIINRHLTACQW 292


>gi|426201090|gb|EKV51013.1| hypothetical protein AGABI2DRAFT_196643 [Agaricus bisporus var.
            bisporus H97]
          Length = 1023

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  IE  L +  I++  +   M    + K+LD  ++D  C  LL+   +
Sbjct: 872  KTVVFSQWTSMLDKIEDALLIYKIRYDRLDGTMKREERSKALDTLKYDPGCEVLLVSLKA 931

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              +GL+L+   +V LM+P W+ ++E Q I R HR+G T+P+      ++G++EE ML+  
Sbjct: 932  GGVGLNLTAAQKVILMDPCWNPAVENQAIDRIHRLGQTKPVLSIKYIIQGSIEESMLKIQ 991

Query: 1112 QDTDR 1116
            +  +R
Sbjct: 992  ERKNR 996



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 9/117 (7%)

Query: 681 SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
           SP+  VHW RV+LDE H++  +   T   + +  L A  R  LTGTP  N    +L  + 
Sbjct: 459 SPLQSVHWFRVVLDEAHSIKET--QTVGCRASCDLIADRRLCLTGTPVQN----KLDDMF 512

Query: 741 PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIP 797
            ++KFL  + +  ++  W   I  P +    EG  RL  ++    I+ R+T     P
Sbjct: 513 ALIKFLRLKPF-DDKNIWTKYISAPAKFGQREGVLRLRTIM--ACITLRRTKESKTP 566


>gi|408398100|gb|EKJ77234.1| hypothetical protein FPSE_02509 [Fusarium pseudograminearum CS3096]
          Length = 1117

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 21/225 (9%)

Query: 911  HILCLDCVAMDSEKC---SLPG--------CGFLYEMQSPEILTR---PENPNPKWPVPQ 956
            HI+C  C+    E+    + PG        C    +    ++  R    E+  P  P  +
Sbjct: 863  HIICRTCIKTFKERVKSVTTPGSNSGNCPVCNAYVKHAFVQLHRREVDAEHDGPAKPKSR 922

Query: 957  DLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD----KVIIFSQFLEHIHVIEQQLT 1012
            + ++    Y         L +DL +    S +A PD    K ++FS +  H+ +IE  L 
Sbjct: 923  NAVKNFDKYEGPHTKTRALLEDLLKAKAAS-EANPDEPPYKSVVFSGWTSHLDLIELALN 981

Query: 1013 VAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIW 1071
              GI F  +   M  + +  ++D FR D +   +L+   +  LGL+L+    V++MEP +
Sbjct: 982  ANGIVFTRLDGSMSRTQRTTAMDRFREDNTVHVILVSIMAGGLGLNLTAGNSVYVMEPQY 1041

Query: 1072 DRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            + + E Q I R HR+G  RP+      MR + EE+MLE LQ+  R
Sbjct: 1042 NPAAEAQAIDRVHRLGQKRPVRTVRYIMRDSFEEKMLE-LQEKKR 1085



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 7/123 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           ++ TL+V P   V +W+ QI+QHV+PG L   ++    +    +    +D+VITT+  +S
Sbjct: 530 AKTTLLVCPLSTVTNWEEQIKQHVQPGALTYHIYHGPNRIKDPARLATFDLVITTYGSVS 589

Query: 673 AEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            E   R+K      P+ Q+ W R++LDE H +  S  L  + +    L A  RW +TGTP
Sbjct: 590 NELSSRRKGKEGQHPLEQIGWFRIVLDEAHMIRESSTL--QFKAICRLQADRRWAVTGTP 647

Query: 728 TPN 730
             N
Sbjct: 648 VQN 650


>gi|401412900|ref|XP_003885897.1| putative helicase conserved C-terminal domain-containing protein
            [Neospora caninum Liverpool]
 gi|325120317|emb|CBZ55871.1| putative helicase conserved C-terminal domain-containing protein
            [Neospora caninum Liverpool]
          Length = 2877

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 23/209 (11%)

Query: 678  RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP-NTPNSQL 736
            R KSP++ +HW R+++DEGHTL  S   +  +Q+   + A  RW+LTGTPT   +    L
Sbjct: 1482 RSKSPLLSIHWQRLVVDEGHTL--SRCTSQYVQLCRMIVAEKRWVLTGTPTSRQSLRHSL 1539

Query: 737  SHLQPMLKFL---------HEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHR 783
            + L  +L+FL         H              I RP    +E G +    +L  LL+ 
Sbjct: 1540 TGLTALLEFLRHPFALPYRHCGVSSNKTTPLKAAICRPL---VERGEAAALFKLSLLLNT 1596

Query: 784  CMISARKTDLQTIPLCIKEVTF-LNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
            C++   K   Q +P       + +  + +   TYN+LV  ++RN+    ++   + +SLL
Sbjct: 1597 CLVRHSKEQCQRLPALRGPTIYRIEPSAKERTTYNDLVQLMQRNLFCTYYSR-KNKDSLL 1655

Query: 843  NPKQWKFRSTTIRNLRLSCCV--AGHIKV 869
            +P Q    ST++ NLR SC +    H++V
Sbjct: 1656 HPSQRAQASTSLWNLRFSCTIQSESHLQV 1684



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 2/120 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSS-NKIKSLDMFRHDASCLALLMDGS 1051
            K+I+ S   E++ ++   L    +K    Y  M    N++ +L  F+ D   + LL+   
Sbjct: 2552 KIIVASSLWENLFLLGCFLEKHRVKCCHFYEKMQDKRNRVDALKSFQQDTETMVLLLSTQ 2611

Query: 1052 -ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              + GLDLS  + V L +P  D ++E+QVISRAHRMGA R +HVE   ++ TVEE +L+ 
Sbjct: 2612 LGAHGLDLSCASHVLLPDPPTDPNVEQQVISRAHRMGALRDVHVEIFILKDTVEETILQL 2671



 Score = 43.5 bits (101), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 26/35 (74%)

Query: 226 GGMFCDEPGLGKTITALSLILKTQGTLADPPDGVK 260
           GG+FCD+PGLGKT+  LS+++K+ G L   P  VK
Sbjct: 775 GGLFCDDPGLGKTLAMLSVVVKSMGRLPAFPRLVK 809


>gi|146092157|ref|XP_001470221.1| DNA repair protein-like protein [Leishmania infantum JPCM5]
 gi|134085015|emb|CAM69416.1| DNA repair protein-like protein [Leishmania infantum JPCM5]
          Length = 1265

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 19/185 (10%)

Query: 943  TRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALP--DKVIIFSQF 1000
            T P  P P+ P+  DL ++     Q S+   +L        +++ ++LP  DKV++FS F
Sbjct: 1037 TSPAEPAPEVPLHLDLSDMNNWSLQLSSKTQYL--------IDTIRSLPAEDKVVVFSSF 1088

Query: 1001 LEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA-----LLMDGSASLG 1055
            L ++   +  L  AG+  A     M    K   L++F HDA+  A     L    S  +G
Sbjct: 1089 LTYLRCAQHWLQAAGVSCALYSGSMTMKQKQSLLELF-HDAARPASPRVLLATISSCGVG 1147

Query: 1056 LDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTD 1115
            L+L+     FLMEP W+   EEQ ++R +R+G T+P+    L   GT+E+ + +     D
Sbjct: 1148 LNLTCANHCFLMEPSWNPGTEEQALNRIYRIGQTKPVTFTKLIADGTIEQNISQLC---D 1204

Query: 1116 RCRRL 1120
            R R L
Sbjct: 1205 RKRAL 1209


>gi|226292087|gb|EEH47507.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 1083

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 20/190 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVW-TDHKKPSAHSLAWDYDVVITTFN 669
           + + TL+V P  L+  W+++I+  V    +L   ++   H+   A+SL+  +DVVITT+ 
Sbjct: 344 VGKGTLVVAPLALIKQWESEIESKVEATHRLRTCIYHGTHRTKYANSLSQ-FDVVITTYG 402

Query: 670 RLSAEWGRRKKSPM--MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            LS+E    ++ P     ++W RV+LDE HT+ +        Q A SL +  RW LTGTP
Sbjct: 403 TLSSEHATSEEKPTGCFAIYWYRVVLDEAHTIKN--RNAKATQAACSLKSEYRWCLTGTP 460

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHR 783
           T N     L  LQ ++ FL  + Y  +  +W   I +P    +  GR     R LQ+  +
Sbjct: 461 TQNN----LDELQSLINFLRIKPY-NDLASWRDQITKP----LNNGRGGLAIRRLQVYLK 511

Query: 784 CMISARKTDL 793
             +  R  D+
Sbjct: 512 AFMKRRTKDV 521



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L  A I +A     M +  +  SLD  R       LL    +
Sbjct: 853  KFIVFSFFTSMLTKIEPFLKGANIGYARYDGAMRNDMRENSLDRLRTSPKTRVLLCSLRA 912

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L +R TVEE++++  
Sbjct: 913  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTIDVKVYKLTIRNTVEERIVDLQ 972

Query: 1112 Q 1112
            +
Sbjct: 973  E 973


>gi|145357178|ref|XP_001422798.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144583042|gb|ABP01157.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 806

 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K I+FSQ+   I ++E +L  A    A +   M  + +  +L  FR D +   +LM   
Sbjct: 654  NKAIVFSQYTAMIEIVEWRLKKAKFTIAKLLGSMPVTQRAANLQAFREDPNVSVILMSLK 713

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            S   GL+L     V+++EP W+ ++E Q + RAHR+G  RP+     + +GT+EE+M+E 
Sbjct: 714  SGGEGLNLQAANYVYVLEPWWNPAVEMQAVMRAHRIGQLRPVTAVRFSTKGTIEERMMEL 773



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 36/73 (49%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW 675
           TL+VVP+  +  W+ +I+  V  G L +FV+   +          YDVV+TT+  + AEW
Sbjct: 144 TLVVVPTSALVQWEEEIKSCVEEGSLRVFVYYADRANVVEGDFKGYDVVLTTYPVVEAEW 203

Query: 676 GRRKKSPMMQVHW 688
            +     +    W
Sbjct: 204 RKIINRHLTACQW 216


>gi|50509490|dbj|BAD31171.1| putative DNA repair protein rhp16 [Oryza sativa Japonica Group]
          Length = 569

 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE  L  +GIK   +   M+   K K++D F +D  C   LM   +
Sbjct: 418  KGIVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEKGKAIDTFTNDPDCRIFLMSLKA 477

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              + L+L+  + VFLM+P W+ ++E Q   R HR+G  +PI      ++ TVEE++L+ L
Sbjct: 478  GGVALNLTVASHVFLMDPWWNPAVESQAQDRIHRIGQFKPIRSMRFVIKDTVEERILQ-L 536

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 537  QEKKR 541


>gi|19111970|ref|NP_595178.1| ATP-dependent DNA helicase Rhp16b (predicted) [Schizosaccharomyces
            pombe 972h-]
 gi|1723497|sp|Q10332.1|YBMA_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C582.10c
 gi|5420446|emb|CAB46673.1| ATP-dependent DNA helicase Rhp16b (predicted) [Schizosaccharomyces
            pombe]
          Length = 830

 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K IIFSQF   + +I+  L  AGI F      M++  + KSLD+ R D+    LL     
Sbjct: 672  KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSDSGTQVLLCSLKC 731

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             +LGL+L+  +RV L +  W+ ++EEQ I R HR+G  R + V  L +  T+EE+++E L
Sbjct: 732  GALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVE-L 790

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 791  QNLKR 795



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 32/225 (14%)

Query: 590 LAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH 649
           L   +  + L L  PL   +  + ++TL+V P  L+  W++++Q      +L   V+   
Sbjct: 266 LGKTIQMIALILSHPLPKKKHSI-KSTLVVAPLSLIKQWESEVQTK---SKLTAIVYHGA 321

Query: 650 KKPSAHSLAWDYDVVITTFNRLSAEW---------GR---------RKKSPMMQVHWLRV 691
            +     +  +YDVVITT+  L +EW         G+         +KK  +   +W R+
Sbjct: 322 SRYKLLKVIHEYDVVITTYQILVSEWVSHNTTGTDGKSPTEAKSYEKKKPSLFAFYWWRI 381

Query: 692 MLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEA 750
           +LDE HT+    N ++K  +A  +L   NRW LTGTP  N     +  L  ++KFLH   
Sbjct: 382 ILDEAHTIK---NKSSKSALACCALQGINRWCLTGTPLQNN----VDELYSLVKFLHINP 434

Query: 751 YGQNQKAWDGGILRPF-EAEMEEGRSRLLQLLHRCMISARKTDLQ 794
           +  +Q  W   I  P  + E      RL  LL   M+   KT L+
Sbjct: 435 FN-DQSVWKDQISLPLCQGEENLVFKRLRMLLSVIMLRRTKTLLE 478


>gi|222637121|gb|EEE67253.1| hypothetical protein OsJ_24412 [Oryza sativa Japonica Group]
          Length = 953

 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE  L  +GIK   +   M+   K K++D F +D  C   LM   +
Sbjct: 802  KGIVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEKGKAIDTFTNDPDCRIFLMSLKA 861

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              + L+L+  + VFLM+P W+ ++E Q   R HR+G  +PI      ++ TVEE++L+ L
Sbjct: 862  GGVALNLTVASHVFLMDPWWNPAVESQAQDRIHRIGQFKPIRSMRFVIKDTVEERILQ-L 920

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 921  QEKKR 925


>gi|409201852|ref|ZP_11230055.1| SNF2-like protein [Pseudoalteromonas flavipulchra JG1]
          Length = 1401

 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 11/139 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K +IFSQF+ H+ +I+ +L   GI+F  +     S  + ++++ F+     + L+   + 
Sbjct: 1250 KALIFSQFVGHLQLIKARLEKRGIRFQYLDGSTPSKARQQAVNAFQKGEGEVFLISLKAG 1309

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE--- 1109
              GL+L+    V  M+P W+ ++EEQ   RAHRMG TRP+ +  L  +GT+EEQ++E   
Sbjct: 1310 GSGLNLTAADYVIHMDPWWNPAVEEQASDRAHRMGQTRPVTIYRLIAKGTIEEQIVELHH 1369

Query: 1110 --------FLQDTDRCRRL 1120
                     L +TD+  +L
Sbjct: 1370 HKKDLADQLLANTDKVMKL 1388



 Score = 40.4 bits (93), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 116/277 (41%), Gaps = 32/277 (11%)

Query: 599  LALCEPLDSVRLYLSRA----TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA 654
            + L + + ++ + L+RA    TL++ P+ +  +W+ +IQ+      + LF    H    A
Sbjct: 961  MGLGKTIQALAMILARANVGPTLVIAPTSVCFNWQQEIQKFAPTLSVKLFSDYPHSDARA 1020

Query: 655  HSLA--WDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
              L+     D VI ++  L     +R+   +  + +  ++ DE   L +   L  + Q A
Sbjct: 1021 EMLSNLQPLDCVILSYGLL-----QREVDILKPIAFETIVADEAQALKNP--LAKRTQAA 1073

Query: 713  ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEE 772
             +L    + + TGTP  N     L+ L  + +F++    G N K +      P E   E+
Sbjct: 1074 CALKGKFKLITTGTPIENN----LTELWSLFRFVNPGLLG-NLKRFSEKFSAPIENANED 1128

Query: 773  ------GRSRLLQLLHRCMISARKTDLQT-IPLCIKEVTFLNFTEEHAGTYNELVVTVRR 825
                   R  L  L+   ++   K  + T +P   +    +  ++E    Y  L    R+
Sbjct: 1129 KLAAHRARKGLKHLIQPFILRRMKHQVLTELPPRTEINVPIQLSQEEQTFYEAL----RQ 1184

Query: 826  NILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
            N +  D    S  +   N +++K  +   R LR +CC
Sbjct: 1185 NAI--DEISQSTQQDSANEQRFKMLAALTR-LRQACC 1218


>gi|392542695|ref|ZP_10289832.1| SNF2-like protein [Pseudoalteromonas piscicida JCM 20779]
          Length = 1401

 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 11/139 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K +IFSQF+ H+ +I+ +L   GI+F  +     S  + ++++ F+     + L+   + 
Sbjct: 1250 KALIFSQFVGHLQLIKARLEKRGIRFQYLDGSTPSKARQQAVNAFQKGEGEVFLISLKAG 1309

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE--- 1109
              GL+L+    V  M+P W+ ++EEQ   RAHRMG TRP+ +  L  +GT+EEQ++E   
Sbjct: 1310 GSGLNLTAADYVIHMDPWWNPAVEEQASDRAHRMGQTRPVTIYRLIAKGTIEEQIVELHH 1369

Query: 1110 --------FLQDTDRCRRL 1120
                     L +TD+  +L
Sbjct: 1370 HKKDLADQLLANTDKVMKL 1388



 Score = 40.4 bits (93), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 116/277 (41%), Gaps = 32/277 (11%)

Query: 599  LALCEPLDSVRLYLSRA----TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA 654
            + L + + ++ + L+RA    TL++ P+ +  +W+ +IQ+      + LF    H    A
Sbjct: 961  MGLGKTIQALAMILARANVGPTLVIAPTSVCFNWQQEIQKFAPTLSVKLFSDYPHSDARA 1020

Query: 655  HSLA--WDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
              L+     D VI ++  L     +R+   +  + +  ++ DE   L +   L  + Q A
Sbjct: 1021 EMLSNLQPLDCVILSYGLL-----QREVDILKPIAFETIVADEAQALKNP--LAKRTQAA 1073

Query: 713  ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEE 772
             +L    + + TGTP  N     L+ L  + +F++    G N K +      P E   E+
Sbjct: 1074 CALKGKFKLITTGTPIENN----LTELWSLFRFVNPGLLG-NLKRFSEKFSAPIENANED 1128

Query: 773  ------GRSRLLQLLHRCMISARKTDLQT-IPLCIKEVTFLNFTEEHAGTYNELVVTVRR 825
                   R  L  L+   ++   K  + T +P   +    +  ++E    Y  L    R+
Sbjct: 1129 KLAAHRARKGLKHLIQPFILRRMKHQVLTELPPRTEINVPIQLSQEEQTFYEAL----RQ 1184

Query: 826  NILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
            N +  D    S  +   N +++K  +   R LR +CC
Sbjct: 1185 NAI--DEISQSTQQDSANEQRFKMLAALTR-LRQACC 1218


>gi|310800555|gb|EFQ35448.1| SNF2 family domain-containing protein [Glomerella graminicola
           M1.001]
          Length = 1107

 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 107/239 (44%), Gaps = 28/239 (11%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTF 668
           + R TL+V P  L+  W+++I++ V   + H      H  P       D   YDVV+TT+
Sbjct: 346 IERTTLVVAPLALIRQWESEIKEKV--AKNHGLNVCVHHGPQRTKRFKDLAAYDVVVTTY 403

Query: 669 NRLSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
             L +EWG         K+    +HW RV+LDE HT+ +    + K     +L +  RW 
Sbjct: 404 QVLVSEWGHSSEDDNGVKAGCFGLHWWRVVLDEAHTIKNRNAKSTK--ACYALRSEYRWC 461

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           L+GTP  N     L  LQ ++KFL  + Y  + K W   I +P +        R L  L 
Sbjct: 462 LSGTPMQNN----LEELQSLIKFLRIKPY-DDLKEWKEQIEKPLKNGKGHVAIRRLHSLL 516

Query: 783 RCMISARKTDLQTIPLCIKEVTFLN----FTEEHAGTYNELVVTVRRNILMADWNDPSH 837
           RC +  R  D+      +KE   LN     T++   +     VT R+ + +A    P+ 
Sbjct: 517 RCFMKRRTKDI------LKEEGALNPGGKPTKDGEKSSTGFKVTERKVVTVATMFSPAE 569



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 5/136 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + ++E      G KF      M +  +  SL   R+D +   LL     
Sbjct: 899  KFIVFSQFTSMMDLVEPFFRKEGFKFTRYDGSMKNDEREASLHRLRNDKNTRILLCSLKC 958

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +  TVEE++L   
Sbjct: 959  GSLGLNLTAATRVIILEPFWNPFVEEQAIDRVHRLTQTVDVIVYKLTVEKTVEERILALQ 1018

Query: 1112 QDTDRCRRLLKEELVK 1127
            +     +RLL E  ++
Sbjct: 1019 EK----KRLLAETAIE 1030


>gi|258574887|ref|XP_002541625.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237901891|gb|EEP76292.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 1041

 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TLIV P  LV  W+T+I   +    +L + ++    +        DYDV+ITT+  
Sbjct: 327 VGKGTLIVAPVALVKQWETEISTKIEATHRLKVGIYHGSGRTRIAKDLTDYDVIITTYGT 386

Query: 671 LSAEWG-----RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTG 725
           LS+E G     + +KS    V W R++LDE HT+ +        Q   +L A  RW LTG
Sbjct: 387 LSSEHGGSTKTQDRKSGCFSVCWYRIVLDEAHTIKN--RNAKSTQAVYALDALYRWCLTG 444

Query: 726 TPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLL 781
           TP  N     L  LQ +++FL  + Y +   AW   I RP    +  GR     R LQ+ 
Sbjct: 445 TPMQNN----LDELQSLIRFLRIKPYDE-LAAWREQITRP----LNNGRGGLAIRRLQVY 495

Query: 782 HRCMISARKTDL 793
            +  +  R  D+
Sbjct: 496 LKAFMKRRTKDV 507



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 78/153 (50%), Gaps = 11/153 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L  AGI +A     M +  +  SLD  R+ +S   LL    +
Sbjct: 809  KFIVFSVFTSMLDKIEPFLKGAGIGYARYDGGMRNDLREASLDRLRNSSSTRVLLCSLRA 868

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  + +R TVE ++L+  
Sbjct: 869  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKVYKMTIRDTVEARILDLQ 928

Query: 1112 QDTDRCRRLLKEELVKPEREG--ARSHRTLHDF 1142
            +         K EL     EG  A S  T++D 
Sbjct: 929  E--------RKRELASATIEGKTAASKLTMNDM 953


>gi|328862898|gb|EGG11998.1| hypothetical protein MELLADRAFT_76519 [Melampsora larici-populina
            98AG31]
          Length = 779

 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 183/439 (41%), Gaps = 54/439 (12%)

Query: 690  RVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEE 749
            RV+LDE HT+ +    + K +    L    RW LTGTP  N     +  + P+L+F+   
Sbjct: 349  RVILDEAHTIKN--RNSQKARACCKLNTVYRWCLTGTPIQNG----VEDIYPLLRFIGPS 402

Query: 750  AYGQNQKA-WDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ------TIPLCIKE 802
                 + + ++  IL+P  +   +     +Q L + ++  R  D +       + L  KE
Sbjct: 403  VKPFYEYSHFNDKILKPMRSNKGKAAIAKIQALLKIILLRRSKDSKDKDGNPILKLPGKE 462

Query: 803  V-----TFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNL 857
            V     TF +  EE   T  E  ++  R   MA+  D       +     + R  T+   
Sbjct: 463  VILLRTTFRDSAEEKFYTSVEERMS-ERMAKMAESGDMQRSYIAILTLILRMRQATL--- 518

Query: 858  RLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILCLDC 917
                    H  +     ++  +++  V N   P +QE    K + L            D 
Sbjct: 519  --------HPSLGSEKAELA-SLEAAVPN---PATQEEIDEKVDDL-----------ADM 555

Query: 918  VAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQ 977
            +     K + P C    E+   E+L     P P     +  +++  ++ +  N +T + +
Sbjct: 556  MGGLGVKQAAPTCAICLEVLVDEML-----PGPHCADCERRVKMAKTF-EGMNASTKISR 609

Query: 978  --DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLD 1035
              +L       +   P K I+FSQF   + +IE  +  A   +A       +  K ++L+
Sbjct: 610  LLELLDEIASESSEKPKKTIVFSQFTSFLDLIEPFIKKAKHGYARYDGAKTADEKAEALN 669

Query: 1036 MFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
              +HD  C  LL+     S+GL+L   +RV LM+P W+ S+E Q   RAHR G    +  
Sbjct: 670  KIKHDPKCTVLLISLRCGSVGLNLICCSRVVLMDPWWNPSIESQAFDRAHRFGQRDDVKC 729

Query: 1095 ETLAMRGTVEEQMLEFLQD 1113
              + +  T+E+++L+  +D
Sbjct: 730  YKITIADTIEDRILKLQED 748


>gi|325191520|emb|CCA25894.1| PREDICTED: similar to SNF2 domaincontaining protein [Albugo laibachii
            Nc14]
          Length = 966

 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 5/207 (2%)

Query: 911  HILCLDCVAMDSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSN 970
            H  C +CV M  E   +          SP  +       P +     L  +  +  Q S 
Sbjct: 736  HTFCRECVKMYLESLMMDAVATCPTCDSPLTVDINAPARPIFKKKSILSRIDTTSFQTST 795

Query: 971  TNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNK 1030
                L Q+L   ++   +    K I+FSQF+  + +I+ +L + GI    +   M    +
Sbjct: 796  KIEALFQEL---DMMKTRDPSGKAIVFSQFVNMLDLIQFRLKLGGIPCVTLSGNMSMDAR 852

Query: 1031 IKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGAT 1089
             + L+ FR D +   LL+   A  + L+L+  + +FLM+P W+ + E Q I R HR+G  
Sbjct: 853  DRILESFRSDVNVTTLLISLKAGGVALNLTIASHIFLMDPWWNPAAESQAIDRTHRLGQF 912

Query: 1090 RPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            +PI      + G++E+++L+ LQD  R
Sbjct: 913  KPIQATHFIIAGSIEDRILQ-LQDKKR 938



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%)

Query: 679 KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSH 738
           K+SP+ ++HW R++LDE H +       N  +    L AS RW LTGTP  N    ++  
Sbjct: 487 KRSPLHRIHWTRIVLDEAHYIKD--RRCNTAKSVFLLNASYRWCLTGTPLQN----RIGE 540

Query: 739 LQPMLKFLHEEAYG 752
           L  +++FL  + + 
Sbjct: 541 LFSLIRFLRIDKFA 554



 Score = 43.5 bits (101), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 35/60 (58%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TL+V P   V  WK++I++ V+   L +++    K+  + S    YD+V+TT++ L AE
Sbjct: 353 GTLVVCPLVAVTQWKSEIERFVKRDHLSIYIHHGGKRMESPSKIASYDIVLTTYSILEAE 412


>gi|430812964|emb|CCJ29642.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 985

 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 81/135 (60%), Gaps = 4/135 (2%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K I+FSQF+E + ++E  L + G K       M ++++ +SL  F  D +   +L+   
Sbjct: 829  EKTIVFSQFVEFLDLLEIPLFLKGYKVLRYDGRMSATHRDESLLKFDQDPTQTVMLISLK 888

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A + GL+L+  ++  L++P W+  +EEQ I+R HR+G TRP+ V  L + GTVE+++L+ 
Sbjct: 889  AGNAGLNLTSASQCILLDPFWNPFVEEQAINRIHRIGQTRPVQVYKLIVEGTVEQRVLDL 948

Query: 1111 LQDTDRCRRLLKEEL 1125
             +   R R L++  L
Sbjct: 949  QK---RKRDLIENAL 960



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 29/157 (18%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TLI  P  L+  W  +IQ   +P         + K+    S    YD+V+TT+  ++ +
Sbjct: 353 TTLICTPVSLLQQWAREIQTKTKPPLKFYIHHGNSKRAIKSSEINKYDIVLTTYGTIAHD 412

Query: 675 WGRR---------------KKSP--MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS--- 714
           +                   KSP  ++   W R++LDE   + +   L+     A+S   
Sbjct: 413 YKNSVKYEKNATENPKYMFYKSPFTLLDHQWHRIILDEAQVIKNRHTLS-----ALSCCK 467

Query: 715 LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAY 751
           L A+ RW L+GTP  N+    +  L  +++FL    Y
Sbjct: 468 LEATYRWCLSGTPMQNS----IDELYSLMRFLRIRPY 500


>gi|115472329|ref|NP_001059763.1| Os07g0511500 [Oryza sativa Japonica Group]
 gi|113611299|dbj|BAF21677.1| Os07g0511500 [Oryza sativa Japonica Group]
          Length = 635

 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE  L  +GIK   +   M+   K K++D F +D  C   LM   +
Sbjct: 484  KGIVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEKGKAIDTFTNDPDCRIFLMSLKA 543

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              + L+L+  + VFLM+P W+ ++E Q   R HR+G  +PI      ++ TVEE++L+ L
Sbjct: 544  GGVALNLTVASHVFLMDPWWNPAVESQAQDRIHRIGQFKPIRSMRFVIKDTVEERILQ-L 602

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 603  QEKKR 607


>gi|46123559|ref|XP_386333.1| hypothetical protein FG06157.1 [Gibberella zeae PH-1]
          Length = 1117

 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 21/225 (9%)

Query: 911  HILCLDCV-----------AMDSEKCSLPGCGFLYEMQSPEILTR---PENPNPKWPVPQ 956
            HI+C  C+           A  S   + P C    +    ++  R    E+  P  P  +
Sbjct: 863  HIICRTCIKTFKERVKSVTAPGSNSGNCPVCNAYVKHAFVQLHRREVDAEHDGPAKPKSR 922

Query: 957  DLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPD----KVIIFSQFLEHIHVIEQQLT 1012
            + ++    Y         L +DL +    S +A PD    K ++FS +  H+ +IE  L 
Sbjct: 923  NAVKNFDKYEGPHTKTRALLEDLLKSKAAS-EANPDEPPYKSVVFSGWTSHLDLIELALN 981

Query: 1013 VAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIW 1071
              GI F  +   M  + +  ++D FR D +   +L+   +  LGL+L+    V++MEP +
Sbjct: 982  ANGIMFTRLDGSMSRTQRTIAMDRFREDNTVHVILVSIMAGGLGLNLTAGNSVYVMEPQY 1041

Query: 1072 DRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            + + E Q I R HR+G  RP+      MR + EE+MLE LQ+  R
Sbjct: 1042 NPAAEAQAIDRVHRLGQKRPVRTVRYIMRDSFEEKMLE-LQEKKR 1085



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 7/123 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           ++ TL+V P   V +W+ QI+QHV+PG L   ++    +    +    +D+VITT+  +S
Sbjct: 530 AKTTLLVCPLSTVTNWEEQIKQHVQPGALTYHIYHGPNRIKDPARLATFDLVITTYGSVS 589

Query: 673 AEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            E   R+K      P+ Q+ W R++LDE H +  S  L  + +    L A  RW +TGTP
Sbjct: 590 NELSSRRKGKEGQHPLEQIGWFRIVLDEAHMIRESSTL--QFKAICRLQADRRWAVTGTP 647

Query: 728 TPN 730
             N
Sbjct: 648 VQN 650


>gi|255947902|ref|XP_002564718.1| Pc22g06920 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591735|emb|CAP97980.1| Pc22g06920 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1292

 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 79/139 (56%), Gaps = 15/139 (10%)

Query: 992  DKVIIFSQFLEHIHV---IEQQLTVAGIKFAGMYS--PMHSSNKIKSLDMFRHDASCLAL 1046
            DK+IIF    EH +V   +EQ L +  +KF    S   M S+ K ++L  FR       L
Sbjct: 991  DKIIIF---YEHDNVAAWVEQGLDLIAVKFRTYASTASMGSNLKSENLSDFRQTHEVRVL 1047

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            LM    AS GL +   +R++++ PIW+R++E Q I RAHR+G  RP++VETL +  T+E 
Sbjct: 1048 LMSVKEASHGLHIPEASRMYIVNPIWERNVESQAIKRAHRIGQKRPVYVETLVLGDTLEH 1107

Query: 1106 QMLEFLQDTDRCRRLLKEE 1124
            +ML      +R + +  EE
Sbjct: 1108 RML------NRSKNMTDEE 1120



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 137/327 (41%), Gaps = 60/327 (18%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
           R+ L   TL++VP  L+DHW+ +I  H     L++ +  +  K  +     ++D+V+ + 
Sbjct: 491 RILLCSGTLVIVPDNLLDHWEREIAIHTT--DLNVLILRNKDKTPSTDELLNFDIVLFSK 548

Query: 669 NRLSAE------WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            R + E       G++ +SP++ +HWLRV++DEGH L S+   T  + +   L    RW+
Sbjct: 549 GRCNRENPKPDKHGQKPESPILNLHWLRVIVDEGHDLAST--TTEMVDLLKKLKFERRWM 606

Query: 723 LTGTP-----------------TPNTPNSQLSH--LQPMLK------------------- 744
           ++GTP                 T +T +S   H  LQP  K                   
Sbjct: 607 ISGTPLSELYGVELSIASQEMDTDDTESSPDEHAFLQPRKKAGNVVEHEIRNLDKLGFMV 666

Query: 745 --FLHEEAYGQNQ-KAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ---TIPL 798
             FL  + +  N    W        E  M      L   L   ++  R   ++   T+P 
Sbjct: 667 RNFLDLKPWSNNSYDCWKTHTRTVGEDGMPRKSPSLRATLQSLVVRHRYETVKKEITLPP 726

Query: 799 CIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLR 858
              +V +L  T       N  + T+  N + ++   P ++    N K  K  +  I+NLR
Sbjct: 727 LYNKVVYLEPTFYDRLYINIFLFTLAVNAITSEREGPDYMFDETNKKNRKKLTELIQNLR 786

Query: 859 LSCCVAGHIKVTDAGEDIQETMDVLVE 885
           L    AG     D  +D+Q T+D+ +E
Sbjct: 787 L----AGFWWAGD--DDVQGTVDIALE 807


>gi|343427991|emb|CBQ71516.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
          Length = 985

 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 81/144 (56%), Gaps = 9/144 (6%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K I+FSQF   ++++E QLT    K+      M   ++  +L+  R D +   +L+   
Sbjct: 829  EKTIVFSQFTSFLNLVEPQLTRHHFKYVRYDGSMKPQDRESALERIRTDPAITVILISFK 888

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S GL+L+  +RV LM+  W+  +EEQ   RAHR+G TR + +  L+++ TVEE++L+ 
Sbjct: 889  AGSTGLNLTSCSRVILMDLWWNPQIEEQAFDRAHRLGQTRDVTIYKLSIKDTVEERILK- 947

Query: 1111 LQDTDRCRRLLKEELVKPEREGAR 1134
            LQ+  R        L K   EG++
Sbjct: 948  LQEKKRA-------LAKAALEGSK 964



 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)

Query: 681 SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLS--- 737
           +P+ +  WLR++LDE   + +     ++    ++  A++RW LTGTP  N      S   
Sbjct: 498 TPLFEAPWLRIVLDEAQNIKNHKAKCSRACFLLAANAASRWCLTGTPLQNDAYEMFSLIH 557

Query: 738 --HLQPMLKFLH-EEAYGQNQKA 757
              +QP   F H +E  G+  K+
Sbjct: 558 FLRVQPFDDFAHFKEKIGEPLKS 580


>gi|407919552|gb|EKG12782.1| SNF2-related protein [Macrophomina phaseolina MS6]
          Length = 1081

 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            KVI+FSQF   + +IE  L  AG +F      M +  +  SL+  R+D     LL     
Sbjct: 854  KVIVFSQFTSMLDLIEPFLRSAGHRFTRYDGSMRNDMREASLNKLRNDPGTRVLLCSLKC 913

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L +R TVEE++L+ L
Sbjct: 914  GSLGLNLTAASRVIILEPFWNPFVEEQAIDRVHRLNQTVDVVVYKLTIRKTVEERILD-L 972

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 973  QEAKR 977



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 30/195 (15%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWD---YDVVITTFN 669
           ++TL+V P  L+  W+++++  V    +L + V   H  PS      +   YD+V+TT+ 
Sbjct: 323 KSTLVVAPLALIKQWESEVKTKVLSSHKLKVLV---HHGPSRTKRGEELKKYDIVVTTYQ 379

Query: 670 RLSAEWGRRKKSPM------MQVHWLRVMLDEGHTLGSSLNLTNKL-QMAISLTASNRWL 722
            L++E       P         VHW R+MLDE H++    N   K+ Q A  L +  RW 
Sbjct: 380 SLASEHAASSDGPEGPKIGCYGVHWYRIMLDEAHSIK---NRNAKMTQAAYGLRSYYRWC 436

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLL 778
           LTGTP  N     L  LQ +++FL  + Y +  + W   I  P    M+ GR     R L
Sbjct: 437 LTGTPMQNN----LDELQSLIRFLRIKPYDELSR-WKNDIAGP----MKSGRGNLAMRRL 487

Query: 779 QLLHRCMISARKTDL 793
           Q+  +  +  R  D+
Sbjct: 488 QVFLKAFMKRRTKDV 502


>gi|397585888|gb|EJK53425.1| hypothetical protein THAOC_27144, partial [Thalassiosira oceanica]
          Length = 511

 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 1/119 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K ++FSQFL  + V  ++L   GIKFA +   M    +  ++  F  D     LL+   
Sbjct: 314  NKAVVFSQFLGTLDVASEELVGCGIKFARVDGHMKQYQRADNISNFTTDPETKVLLLSMR 373

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            A + GL+L      FLM+P  + ++EEQ I R HR+G TRP+ V+ L ++ TVE++++E
Sbjct: 374  AGAAGLNLMAANYCFLMDPATNAAIEEQAIDRIHRIGQTRPVTVKRLILKDTVEQRIIE 432


>gi|449547256|gb|EMD38224.1| hypothetical protein CERSUDRAFT_152945 [Ceriporiopsis subvermispora
           B]
          Length = 1201

 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 32/151 (21%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
           ++YLS ATL+VVP+ L+  W+T+I +H       L + +  + PS  +LA  YD+++ T+
Sbjct: 407 KIYLSSATLVVVPANLLRQWETEIWKHCVADLRVLVLRSTTELPSVSALASRYDIIVMTY 466

Query: 669 NRLSAEWGRRKK-----------------------------SPMMQVHWLRVMLDEGHTL 699
           +R + E GR+ K                             SP+ Q+ W R+++DEGH  
Sbjct: 467 SRFATE-GRKFKTSDSPLPHVCQCPPHPDSRVPDCCCESAASPLSQIRWKRLVIDEGHVA 525

Query: 700 GSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
           GS    T+ +  A SL    RW++TGTPT N
Sbjct: 526 GSP--STDSVAFAESLNVECRWIVTGTPTTN 554



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 13/168 (7%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K +IFS     +  + + L + G+KF    S + + ++  ++  F    +    LM+  
Sbjct: 980  EKFLIFSSSPLTLAFVGEALELIGVKFLSYMSTIPAEHRDHAVLTFETSPTFRVFLMELK 1039

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              + GL+L   +RV   EP+W   +E Q I R HR+G +RP+ V+TLA+RGT EE ++  
Sbjct: 1040 HGARGLNLVTASRVIFCEPVWQADVETQAIKRVHRIGQSRPVSVQTLAIRGTYEEVVVTR 1099

Query: 1111 LQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLSHLSFVRTNS 1158
                   R+ LK      ++      RT+ DF     +++ +F+R ++
Sbjct: 1100 -------RQALKARTSNTKQSSMTDDRTIRDF-----IANPTFLRAST 1135



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 9/119 (7%)

Query: 160 MPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAP 219
           +P +K +L P+Q+ +V  M++RE N      PLY+ +   +G  FY+   + ++     P
Sbjct: 194 IPHLKSQLHPYQRRSVASMINREINPPCTPDPLYLPIVGINGQIFYIQPATMEVLRD-CP 252

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWCTHNGDPRCGYYDLS 278
            +    GG+ C+E G GKTI  LSLIL T   L  PP+ V   W     DPR  +  LS
Sbjct: 253 KVAQAPGGILCEELGTGKTIMTLSLILSTLDQLPSPPEDV---W-----DPRPIFTPLS 303


>gi|162312350|ref|XP_001713034.1| ubiquitin-protein ligase E3 Rad8 [Schizosaccharomyces pombe 972h-]
 gi|548669|sp|P36607.1|RAD5_SCHPO RecName: Full=DNA repair protein rad5
 gi|443973|emb|CAA52686.1| rad8 [Schizosaccharomyces pombe]
 gi|159883887|emb|CAA89964.2| ubiquitin-protein ligase E3 Rad8 [Schizosaccharomyces pombe]
          Length = 1133

 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 1/121 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG 1050
            P+KV+IFSQF   + +I   L    + +A     M    +  +L+ FR+D     L++  
Sbjct: 981  PEKVVIFSQFTTFLDIIADVLESEKMGYARFDGTMSQQMRSTALETFRNDPDVNVLIISL 1040

Query: 1051 SAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             A  +GL+L+    VF+M+P W  S+E Q I R HR+G  +P+ V    +R TVEE+ML+
Sbjct: 1041 KAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTVEERMLK 1100

Query: 1110 F 1110
             
Sbjct: 1101 I 1101



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 25/234 (10%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP-SAHSLAWDYD----VVITT 667
           SR TL+V P  L+D W ++  +  +  +    ++   +KP    S   D      ++IT+
Sbjct: 569 SRTTLVVAPMSLLDQWHSEACKVSQGTKFRSMIYYGSEKPLDLKSCVIDTSTAPLIIITS 628

Query: 668 FNRLSAEWGRRKKSP-MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           +  L +E+ ++  S  +  VHW RV+LDEGH + +  + T K   +IS  + NRW++TGT
Sbjct: 629 YGVLLSEFSQQSHSSGLFSVHWFRVVLDEGHNIRNRESKTAKACHSIS--SQNRWVITGT 686

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
           P  N    +L  L  ++KF+  E +  N   W   +  P++++       ++Q +   ++
Sbjct: 687 PIVN----KLDDLYSLIKFMRYEPWC-NYTYWQTFVSLPYQSKDVLKALNVVQSILEFLV 741

Query: 787 SARKTDLQ--------TIPLCIKEVTFLNFTEEHAGTYNELVV----TVRRNIL 828
             R  + +        T+P    ++ +L+F++     Y+ L      TV  NI+
Sbjct: 742 LRRTKETKDRNGNSIVTLPPKTVKIEYLDFSDSERKIYDSLYTKAKSTVNANIV 795



 Score = 43.1 bits (100), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 20/101 (19%)

Query: 165 LKLFPHQQAAVEWMLHREWNAEV-----LRHPLYIDL---------------ATEDGFYF 204
           L L  +Q+ A+ WM  +E   +        HPL+                  + +D  +F
Sbjct: 443 LDLREYQKQALYWMCCKEEGVQSDGSAPKLHPLWSRFRFPKDSEFPEFFKCSSDDDNTHF 502

Query: 205 YVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           YVN  +G+       +M    GG+  DE GLGKTI  LSLI
Sbjct: 503 YVNLYTGETTMLFPNSMPYHRGGILADEMGLGKTIEVLSLI 543


>gi|429965865|gb|ELA47862.1| hypothetical protein VCUG_00704 [Vavraia culicis 'floridensis']
          Length = 816

 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 78/130 (60%), Gaps = 2/130 (1%)

Query: 983  NLESN-KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDA 1041
            N++SN +   +K IIFSQF+  + ++  +L  AG +   +Y  M  + +  S++ F++D+
Sbjct: 655  NIQSNARTSSNKSIIFSQFVNFLEMLSWRLERAGFRCVKIYGSMPQTQRKASIESFQNDS 714

Query: 1042 SCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR 1100
            +    L+   A  L L+L+    VFLM+P W+ ++EEQ + R HR+G  RPI++  + + 
Sbjct: 715  TIKIFLISLKAGGLALNLTEANNVFLMDPWWNPAVEEQAMDRIHRIGQFRPINIYKIVIE 774

Query: 1101 GTVEEQMLEF 1110
             ++E +++E 
Sbjct: 775  DSIESKIVEL 784



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 76/174 (43%), Gaps = 51/174 (29%)

Query: 617 LIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWG 676
           L++ P   ++ WK+++ +H     +   +  D++K  +  +    +V+++++ ++ + + 
Sbjct: 183 LVIAPVVALNQWKSEVAKHTLGINV---ISQDNQKLKSDQI----NVILSSYGKIESIYR 235

Query: 677 RRKK------------------------------------SPMMQVHWLRVMLDEGHTLG 700
           R K                                     S + ++H+ R++LDE H + 
Sbjct: 236 RNKNLVKAGGSSSLIKTGKPGDLQQQIASKYDDNDNTFLFSSIYELHFRRIILDEAHAIK 295

Query: 701 SSLNLTNKLQMAIS-LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQ 753
            S + TN    AIS L +  RW +TGTP  N    ++S L  ++KFL     GQ
Sbjct: 296 DSRSSTN---TAISRLNSDKRWGVTGTPVQN----RVSDLFSLIKFLKIAPLGQ 342


>gi|169620129|ref|XP_001803476.1| hypothetical protein SNOG_13266 [Phaeosphaeria nodorum SN15]
 gi|160703967|gb|EAT79150.2| hypothetical protein SNOG_13266 [Phaeosphaeria nodorum SN15]
          Length = 1106

 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 8/153 (5%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FS +  H+ +IE  L     ++  +   M   N+ +S+ +FR D + + +L+  
Sbjct: 951  PIKSVVFSCWTTHLDLIELALKDHQHRYCRLDGRMSRQNRDESMRVFREDPTIIVMLVSI 1010

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            G+  LGL+L+   +VF+MEP ++ + E Q + R HR+G  R + ++   M  + EE+M+E
Sbjct: 1011 GAGGLGLNLTTANKVFMMEPQFNPAAEAQAVDRVHRLGQDREVMIKRFIMDNSFEEKMVE 1070

Query: 1110 FLQDTDRC-------RRLLKEELVKPEREGARS 1135
              Q   +        +RL KEE  K   E  RS
Sbjct: 1071 LQQKKKKLADLTLARQRLSKEEQTKQRLEELRS 1103



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 140/318 (44%), Gaps = 32/318 (10%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP-----SAHSLAWDYDVV 664
           L  S+ATL+V P   + +WK Q+++H   G      WT +        S+  LA  YD+V
Sbjct: 520 LVNSKATLLVCPLSTMTNWKEQMKEHFPAGSG--LKWTRYHGSERFNMSSKDLA-KYDIV 576

Query: 665 ITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLT 724
           +TT++ +  +   RK+ P+  ++W R++LDE HT+    N T + +    L    RW +T
Sbjct: 577 VTTYHIIQKDINDRKR-PLPYINWFRIVLDEAHTI---RNPTAQSRATCVLFGQRRWAVT 632

Query: 725 GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRC 784
           GTP  N    +L  L  +  F+    +   Q+ ++  ++ PF+    +   + LQLL   
Sbjct: 633 GTPVQN----RLEDLGALFNFIKLSPF-NTQQGFNQYVVHPFKNADPDVVPK-LQLLVST 686

Query: 785 MISARKTDL--QTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
           +   R  ++    +P     +  L F++E    ++      +R + +A   D       +
Sbjct: 687 VTMRRTKEIIKDEVPKRNDIIVKLEFSKEERQLHDWFEKDTQRKVNIATSGDK------M 740

Query: 843 NPKQWKFRSTTIRNLRLSCCVAGHIKVTDA-----GEDIQETMDVLVENGLDP-LSQEYA 896
               +    T I N+RL C     +   DA     G      M++  + G  P L++  A
Sbjct: 741 GGNTYARILTAILNMRLICAHGRDLLSDDALKTTDGMTYDNPMEIGEDEGEAPALTRSQA 800

Query: 897 FIKYNLLNGGNCLRHILC 914
           +   +LLN  +    + C
Sbjct: 801 YDMLDLLNQTDNDECVFC 818



 Score = 44.7 bits (104), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRH-----PLYIDLATEDGFYFYVNTVSGDIATGT 217
           +K +L+PHQ+ A+ +M  +E +     H      L+     ++G  FY + ++G+     
Sbjct: 406 IKTELYPHQKQALYFMWDKEQDHSAEEHDQRKDTLWAPKLRDNGRKFYRHVITGEELDVK 465

Query: 218 APTMRDFHGGMFCDEPGLGKTITALSLI 245
               R   GG+  DE GLGKT++ LSL+
Sbjct: 466 PQACR---GGILADEMGLGKTLSILSLV 490


>gi|388580664|gb|EIM20977.1| hypothetical protein WALSEDRAFT_29185 [Wallemia sebi CBS 633.66]
          Length = 1121

 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 13/168 (7%)

Query: 957  DLIELQPSYRQWSNTNTFLKQDLYRPNLESN-KALPDKVIIFSQFLEHIHVIEQQLTVAG 1015
            DL E+  +    SN NT         N +++ KA+P+K I+FSQ+   + +IE  L    
Sbjct: 928  DLAEISTTNPHSSNFNTL--------NFDADIKAVPNKTIVFSQWTSMLDLIEFGLRECQ 979

Query: 1016 IKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRS 1074
            I F+ +   M    +  SL+  ++D  C  +L+   A  +GL+L+   RV++M+  W+ +
Sbjct: 980  IGFSRLDGSMQRDQRAHSLERLKNDPKCEVMLISLRAGGVGLNLTTANRVYMMDSWWNVA 1039

Query: 1075 MEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLK 1122
            +E Q + R  R+G  RP+ V    ++ T+EE +LE     +R  RL K
Sbjct: 1040 VENQAVDRVCRIGQKRPVQVVRYIIQNTIEEHILEI---QERKTRLFK 1084



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 16/145 (11%)

Query: 681 SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
           SP+ Q+ W RV+LDE H +     + +K   A  + A+ R  LTGTP  N    ++  L 
Sbjct: 573 SPLQQIEWFRVVLDEAHYIKDPSTMMSK--AASEMAANRRLCLTGTPIQN----KIEDLY 626

Query: 741 PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ------ 794
            +L+FLH E + Q ++ W+  I  P ++ +  G +R +Q++ R +   R  +++      
Sbjct: 627 ALLRFLHLEPFDQ-RETWNTYIGLPIKSNLNVGFAR-IQIIMRHITMRRTKEMKNMDGTP 684

Query: 795 --TIPLCIKEVTFLNFTEEHAGTYN 817
             T+P    E+  L F       Y+
Sbjct: 685 IVTLPDRSDELRSLEFNPRERAIYD 709


>gi|340521671|gb|EGR51905.1| predicted protein [Trichoderma reesei QM6a]
          Length = 924

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 2/124 (1%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG 1050
            P K ++FS +  H+ +IE  L  A IKF  +   M    +  ++D FR D +   +L+  
Sbjct: 767  PFKSVVFSGWTSHLDLIELALKEANIKFTRLDGSMTRQARTAAMDTFREDRNIHVILVSI 826

Query: 1051 SAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            +A  LGL+L+    V++MEP ++ + E Q + R HR+G  RP+      MR + EE+MLE
Sbjct: 827  TAGGLGLNLTAGNNVYVMEPQYNPAAEAQAVDRVHRLGQKRPVRTIRYIMRNSFEEKMLE 886

Query: 1110 FLQD 1113
             LQD
Sbjct: 887  -LQD 889



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 12/161 (7%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           +++TLI+ P   + +W+ QI+QH   GQL   ++    +    +    +D+VITT+  +S
Sbjct: 337 TKSTLIICPLSTITNWEEQIKQHTATGQLSYHIYHGPNRIKDVARLTQFDIVITTYGSVS 396

Query: 673 AEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            E   R+K+     P+ ++ W R++LDE H +      T + +  + L A  RW +TGTP
Sbjct: 397 NELSSRRKAKTGSFPLEELGWFRIVLDEAHMIRE--QSTMQFKAIVRLQAQRRWAVTGTP 454

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEA 768
             N    +L     +L FL  E +    K +   I+ PF+A
Sbjct: 455 VQN----RLDDFAALLSFLRLEPFHHKAK-FVRHIVEPFKA 490


>gi|392597557|gb|EIW86879.1| hypothetical protein CONPUDRAFT_46727 [Coniophora puteana RWD-64-598
            SS2]
          Length = 1228

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 69/118 (58%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  +E  L  A I++  +   M    + +++D  + D +C  LL+   +
Sbjct: 1075 KTVVFSQWTTMLDKVEDALETARIRYDRLDGTMKREERSRAMDALKKDPACEVLLVSLRA 1134

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RV+LM+P W+ ++E Q + R HR+G TRP+    L +  ++E+++LE
Sbjct: 1135 GGVGLNLTAAQRVYLMDPYWNPAVENQAVDRIHRLGQTRPVTTVKLIIENSIEDRLLE 1192



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 105/264 (39%), Gaps = 41/264 (15%)

Query: 681 SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
           SP+  ++W RV+LDE H +  +   T   +    L A  R  LTGTP  N    +L  + 
Sbjct: 661 SPLQMINWFRVVLDEAHCIKET--GTVGCRACCDLMADRRLCLTGTPVQN----KLDDIF 714

Query: 741 PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT--------- 791
            ++KFL  + +  ++  W   I  P +     G +RL  ++ R  I+ R+T         
Sbjct: 715 ALIKFLRLQPF-DDKNVWTEYIATPVKYGQSLGVARLQTIMAR--ITLRRTKETRDQDGK 771

Query: 792 DLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS 851
            +  IP    E+ +L F E+    Y++       N   A++N+ S+   ++  K +    
Sbjct: 772 KILNIPPRRDELRYLKFDEQEQKIYDQFF-----NESKAEFNELSNKNEVM--KNYVGIL 824

Query: 852 TTIRNLRLSCCVAGHIKVTDAGED-------IQETMDVLVENGLDPLSQEYAFIKYNLLN 904
             I  LR  C     ++  D  +D        +E  + + + G++ +     F       
Sbjct: 825 QKILRLRQICDHFELVEGKDGSDDPLHALGSYEEIAEAIAKEGINLVRATAIFA------ 878

Query: 905 GGNCLRHILCLDCVAMDSEKCSLP 928
               LR      CV    E C  P
Sbjct: 879 ---LLREASTTQCVECGEELCCAP 899


>gi|440797680|gb|ELR18761.1| helicase Cterminal domain containing protein [Acanthamoeba
            castellanii str. Neff]
          Length = 1016

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 1/121 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K I+FSQ+   + ++E  L  AGI+F  +   M  +++   +  FR D      L+   A
Sbjct: 866  KSIVFSQWTSMLDLVEIPLQEAGIRFVRLDGSMPQAHRENHIRTFRTDPGVNVFLVSMKA 925

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              LGL+L+  + VFL++P W+ + E+Q I R HR+G  RP+ V    ++ T+EE++LE  
Sbjct: 926  GGLGLNLTTASHVFLLDPWWNPATEDQAIDRVHRLGQVRPVVVTRFVVKDTIEERILELQ 985

Query: 1112 Q 1112
            Q
Sbjct: 986  Q 986



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 35/198 (17%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
            ++  L+V P  ++  W  +I+ H   G + ++V+    +    +    +DVVITT++ L
Sbjct: 520 FAKTNLVVCPLSVLTQWLDEIRSHTASGHISIYVYHGANRVRDPAFLAKHDVVITTYSTL 579

Query: 672 SAEWGRRKK----SP---------------------MMQVHWLRVMLDEGHTLGSSLNLT 706
           +AE    KK    SP                     ++QV W RV+LDE HT+      T
Sbjct: 580 AAELPSEKKGKASSPEAIAEAKAKRQQRKGDPQGAALIQVPWYRVLLDEAHTIKDRSTRT 639

Query: 707 NKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF 766
            K   A +L A  RW +TGTP  N    +L  L  +L FL       N     G +L+ +
Sbjct: 640 AK--AAFALKAQRRWAVTGTPIQN----KLDDLYSLLHFLRLSKTKFNAFIQAGSVLKNY 693

Query: 767 EAEMEEGRSRLLQLLHRC 784
              +E     LL+L   C
Sbjct: 694 AHILE----LLLRLRQAC 707


>gi|150863827|ref|XP_001382433.2| DNA-dependent ATPase of the nucleotide excision repair factor 4
            complex [Scheffersomyces stipitis CBS 6054]
 gi|149385083|gb|ABN64404.2| DNA-dependent ATPase of the nucleotide excision repair factor 4
            complex [Scheffersomyces stipitis CBS 6054]
          Length = 1343

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 72/120 (60%), Gaps = 5/120 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH----DASCLALLM 1048
            K +IF +F +  + + + L V G+ +    + ++ + + ++L +F      +   + L+M
Sbjct: 1070 KSLIFFEFEDSAYYLTELLDVLGVNYILYATFINPAERARNLSLFSEYITDEQGGITLIM 1129

Query: 1049 DGS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            D   A+ GL +   T V+ M P+W RS+E Q I RAHR+G T+ +HVETL +RGT+EE++
Sbjct: 1130 DLRLAAHGLTIVEATHVYFMSPVWQRSIEAQAIKRAHRIGQTKDVHVETLVLRGTLEEEI 1189



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 18/135 (13%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLA---------- 658
           L+L   TLI+VP  L   W T++ +H++PG L  LF+ +  +K    S            
Sbjct: 499 LFLCNTTLIIVPDNLFHQWNTELNKHIQPGFLSKLFISSQFRKEIITSRGTYTNVSSKDP 558

Query: 659 ---WDYDVVITTFNRLSAEWGR--RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI 713
                YD+VI T + L+ ++G    +++P+ +++W R+++DEGH++ S  + T+ L    
Sbjct: 559 RDLIKYDLVIMTHSYLARQFGELSSEENPLNKIYWKRLIIDEGHSMNSKSSKTSNLCKV- 617

Query: 714 SLTASNRWLLTGTPT 728
            + A  RW +TGTPT
Sbjct: 618 -MQAERRWAVTGTPT 631


>gi|350630092|gb|EHA18465.1| hypothetical protein ASPNIDRAFT_119479 [Aspergillus niger ATCC
           1015]
          Length = 708

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 116/261 (44%), Gaps = 48/261 (18%)

Query: 599 LALCEPLDSVRLYLSRA--------TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH- 649
           + L + + ++ L +SR         TLI+ P  LV  WK +I++ VRPG+  L +W  H 
Sbjct: 34  MGLGKTIQAIALIVSRPSTDPERKPTLIIAPVALVQQWKREIERMVRPGKHQLSIWVLHG 93

Query: 650 -KKPSAHSLAWDYDVVITTFNRLSAEWGRRKKS------------------PMM--QVHW 688
            K+ +       YDVV+TTF  L+AE  R++K                   P++  +  W
Sbjct: 94  DKRLTTFRELKRYDVVLTTFGTLAAELKRKQKYEELEERDVNLARKALDSLPLLGRRCKW 153

Query: 689 LRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
            RV+ DE   +    N   K  +A   L  + RW +TGTP  N     +  L  ++KFL 
Sbjct: 154 YRVIADEAQCIK---NRNAKAALACCQLNTTYRWCMTGTPMMNN----VEELHSLIKFLR 206

Query: 748 EEAYGQNQKAWDGGILRPFEAE--MEEGRSRLLQLLHRCMISAR----KTDLQTI---PL 798
              Y  N + ++    RP ++   M E     LQ+L + ++  R    K D + I   P 
Sbjct: 207 IRPYC-NIETFNRDFTRPLKSSPAMREKAMLQLQVLLKAILLRRTKSSKIDGKPILQLPP 265

Query: 799 CIKEVTFLNFTEEHAGTYNEL 819
            + E     F+EE    YN L
Sbjct: 266 KVSERVHAVFSEEEQEFYNAL 286



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K IIFSQF   + ++E  +   G  +      M  +++  S+  F  +  C  +L+   
Sbjct: 554  EKTIIFSQFTSLLDLLEIPIARQGWDYRRYDGSMRPADRNTSVMDFTDNEDCRIMLVSLK 613

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A + GL+L   ++V + +P W+  +EEQ + RAHR+G  RP+ +  + ++ TVE+++LE 
Sbjct: 614  AGNAGLNLVAASQVIIFDPFWNPYVEEQAVDRAHRIGQVRPVQIHRIVVKDTVEDRILE- 672

Query: 1111 LQDTDR 1116
            LQD  R
Sbjct: 673  LQDKKR 678


>gi|224089945|ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
 gi|222854852|gb|EEE92399.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 799

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 20/210 (9%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE- 674
           TLIV P  +   W TQ+++H + G L ++++   +      L   +D+V+TT++ L+AE 
Sbjct: 281 TLIVCPPAVFSTWITQLEEHTQRGSLGVYMYYGERTREVEELK-KHDIVLTTYSTLAAED 339

Query: 675 -WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS-LTASNRWLLTGTPTPNTP 732
            W   + SP+ ++ W RV+LDE H +    N  ++   A++ L A  RW++TGTP  N  
Sbjct: 340 PW---EDSPVKKIDWCRVILDEAHVIK---NANSQQSRAVTKLNAKRRWVVTGTPIQNGS 393

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               S    ++ FL  E +   +  W   + RP     ++G SRL  L+    IS R+T 
Sbjct: 394 LDLFS----LMAFLRFEPFSI-KSYWQSLLQRPLAQGNKKGLSRLQVLM--ATISLRRTK 446

Query: 793 ---LQTIPLCIKEVTFLNFTEEHAGTYNEL 819
              +  +P    E  ++  + E    Y+++
Sbjct: 447 DKGVVGLPSKTVETHYIELSGEERELYDQM 476



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 81/150 (54%), Gaps = 9/150 (6%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNK---IKSLDMFRHDASCLALLMD 1049
            K ++FSQF + + ++E+ L  AG K   +   M++  +   IK   +   D   + L   
Sbjct: 645  KSVVFSQFQKMLVLLEEPLKEAGFKILRLDGSMNAKKRAQVIKQFGVPGPDGPTVLLASL 704

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             ++  G++L+  +RV+L+EP W+ ++EEQ + R HR+G    + V  L  + ++EE++LE
Sbjct: 705  KASGAGINLAVASRVYLLEPWWNPAVEEQAMDRVHRIGQEEDVTVVRLIAQSSIEERILE 764

Query: 1110 FLQDTDRCRRLLKEELVKPEREGARSHRTL 1139
                 +R ++L KE      R G ++ R +
Sbjct: 765  M---QERKKKLAKEAF---GRRGTKTQREV 788



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 10/83 (12%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           +K +LF HQ+  + W+++RE + E+   P + +   +DG +  V T   +  T   P   
Sbjct: 178 IKSQLFEHQKEGLWWLVNRENSGEL--PPFWEE---KDGEFVNVLT---NYHTNRRP--E 227

Query: 223 DFHGGMFCDEPGLGKTITALSLI 245
              GG+F D+ GLGKT+  LSLI
Sbjct: 228 PLRGGIFADDMGLGKTLALLSLI 250


>gi|167521105|ref|XP_001744891.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776505|gb|EDQ90124.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1094

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 20/218 (9%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAW-DYDVVITTFNRL 671
           S+ATLIV P  L+  W+ ++ QH+    + +  +   +     +L W +YDVV+TT+  +
Sbjct: 545 SKATLIVCPVSLLSQWEEEVHQHLE--GMKVLPYHAQRSTVTPALIWTEYDVVLTTYGVV 602

Query: 672 SAEWG---RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           ++E     R + S +   H+ R++LDEGH + +    T   +    L+A NRW+LTGTP 
Sbjct: 603 TSEHMQHLRGQTSLLFGTHFWRIILDEGHMIRN--RNTAGARACHELSARNRWVLTGTPI 660

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
            N    +L  +  +++FL  E Y      W   +  PFE + + G S L ++L   ++  
Sbjct: 661 QN----RLEDVYSLIRFLRVEPYAHF-SYWRQHVQEPFERDEDAGISALQKILAPLLLRR 715

Query: 789 RK-------TDLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
            K       + +  +P    EV  L F+      Y+ +
Sbjct: 716 TKHTKDETGSPIVQLPSSSVEVLMLEFSSAEREFYDAI 753



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 5/86 (5%)

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +  +GL+L+  + V L++P W  ++E Q I R HR+G  +P+ ++   MR ++EE++L  
Sbjct: 1001 TGGVGLNLTAASHVILVDPWWSPAVEAQAIDRVHRIGQDKPVTIKRYIMRDSIEERILAL 1060

Query: 1111 LQDTDRCRRLLKEELVK--PEREGAR 1134
             +   R R L+   L +   ER+  R
Sbjct: 1061 QK---RKRALVHSALTRNATERQAER 1083



 Score = 47.8 bits (112), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 8/92 (8%)

Query: 162 CMKLKLFPHQQAAVEWMLHREWNAEVLR--------HPLYIDLATEDGFYFYVNTVSGDI 213
           C+K  L P+Q+ A+ W++ RE  +   R        HPL+ ++    G  F+     G +
Sbjct: 376 CVKSTLRPYQKQALWWLVSREQLSASARDTGRERQLHPLWQEMRFASGDAFFWKQAGGRV 435

Query: 214 ATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           +       +   GG+  D  GLGKT+ +L+L+
Sbjct: 436 SVYFPHASQQARGGILADAMGLGKTVQSLALV 467


>gi|378731258|gb|EHY57717.1| adenosinetriphosphatase [Exophiala dermatitidis NIH/UT8656]
          Length = 1190

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   + +IE  L    I+FA     M +  +  SL+  R D S   LL    +
Sbjct: 942  KYIVFSFFTSMLDLIEPFLKEHRIRFARYDGKMRNDAREASLNSLRTDPSTRVLLCSLRA 1001

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T+ + V  L ++ TVEE++LE L
Sbjct: 1002 GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTQDVKVYKLTIKDTVEERILE-L 1060

Query: 1112 QDTDR 1116
            QD  R
Sbjct: 1061 QDKKR 1065



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 11/186 (5%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TL+V P  L+  W+ +I+  V +   L + V    ++  ++     YDVVITT+  
Sbjct: 505 VGKGTLVVAPLALIKQWEGEIKDRVEKEHALKVCVHHGPQRAKSYKELQKYDVVITTYQT 564

Query: 671 LSAEWGRRKKSPMMQ---VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
           LS+E    + S  +    VHW R++LDE H++ +      K   A +L A  RW LTGTP
Sbjct: 565 LSSEHAGSEGSLKVGCFGVHWYRIILDEAHSIKNRNAKATK--AACALNAEYRWCLTGTP 622

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
             N     L  LQ ++ FL  + Y  +   W   I +P+         R LQ+  +  + 
Sbjct: 623 MQNN----LDELQSLIHFLRIKPY-DDLNLWREQITKPWNNGKAGLALRRLQVYLKAFMK 677

Query: 788 ARKTDL 793
            R  D+
Sbjct: 678 RRTKDV 683


>gi|449283935|gb|EMC90529.1| Transcription termination factor 2 [Columba livia]
          Length = 1185

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 37/177 (20%)

Query: 585 KTLDNLAFDLAALRLALCEPLDSVRLYLSR---------ATLIVVPSYLVDHWKTQIQQH 635
           KTL  +A  LA  +L   +  + + ++LS+          TLIV P+ L+ HWK +I +H
Sbjct: 614 KTLTMIALVLAQKQLNTEKRKEKLEIWLSKNDSTVISSHGTLIVCPASLIHHWKKEIDRH 673

Query: 636 VRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKK--------------- 680
           V  G+L ++++    +     +  +YDVV+TT++ +S E    K+               
Sbjct: 674 VGWGKLRVYLYHGPNRDKHAEVLSEYDVVVTTYSLVSKEVPTSKEEGEVPAEDHDVGCGS 733

Query: 681 ---SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS---LTASNRWLLTGTPTPN 730
              SP+++V W RV+LDE H      N+ N K+Q +I+   L AS RW +TGTP  N
Sbjct: 734 SPCSPLLRVAWARVILDEAH------NIKNPKVQTSIAVCKLRASARWAVTGTPIQN 784



 Score = 49.3 bits (116), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/131 (20%), Positives = 70/131 (53%), Gaps = 6/131 (4%)

Query: 1004 IHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG--SASLGLDLSFV 1061
            + V+   L   G+K+A +   ++   ++  ++ F ++     +++    +  +GL+L+  
Sbjct: 1044 LKVVAVHLQRLGLKYAIVDGSVNPKQRMDVVEEFNNNPRGPQVMLVSLLAGGVGLNLTGG 1103

Query: 1062 TRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLL 1121
              +FL++  W+ ++E+Q   R +R+G  + + +      GTVEE++L+      R +++L
Sbjct: 1104 NHLFLLDMHWNPALEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQL----QRRKKVL 1159

Query: 1122 KEELVKPEREG 1132
             ++++  + EG
Sbjct: 1160 AQQVLSGKGEG 1170


>gi|367022704|ref|XP_003660637.1| hypothetical protein MYCTH_2299158 [Myceliophthora thermophila ATCC
           42464]
 gi|347007904|gb|AEO55392.1| hypothetical protein MYCTH_2299158 [Myceliophthora thermophila ATCC
           42464]
          Length = 1113

 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 13/210 (6%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           ++ATL+V P   V +W+ QI+QH++PG +   ++    +    +    +D+VITT+  + 
Sbjct: 532 AKATLLVCPLSTVTNWEEQIKQHIKPGSITYHIYHGPNRIKDVAQLAQFDLVITTYGSVV 591

Query: 673 AEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
           +E   R K      P+ ++ W R++LDE HT+     L    +    L A+ RW +TGTP
Sbjct: 592 SELNSRSKRKQGTYPLEEIGWFRIVLDEAHTIREQNTLA--FKSICRLQANRRWAVTGTP 649

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
             N      + L  +     +E     +  +   I++PF+A   E   +L  L+    + 
Sbjct: 650 VQNKLEDLAALLAFLRLKPFDE-----RSKFVQFIIQPFKAADPEIVPKLRVLIDTITLR 704

Query: 788 ARKTDLQTIPLCIKEVTFLNFTEEHAGTYN 817
            R  D   +P  I EV  L+FT E    Y+
Sbjct: 705 -RLKDKIHLPERIDEVVKLDFTPEERQVYD 733



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 2/127 (1%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FS +  H+ +I+  L  AGI +  +   M    +  ++D FR D S   +L+  
Sbjct: 954  PFKSVVFSGWTSHLDLIQIALDNAGITYTRLDGKMSRPARNAAMDAFREDKSVQVILVSL 1013

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  LGL+L+    V++MEP ++ + E Q + R HR+G TR +      M+ + EE+ML+
Sbjct: 1014 MAGGLGLNLTAGNTVYVMEPQFNPAAEAQAVDRVHRLGQTRCVRTVRFIMKDSFEEKMLQ 1073

Query: 1110 FLQDTDR 1116
             LQD  +
Sbjct: 1074 -LQDKKK 1079


>gi|115391319|ref|XP_001213164.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114194088|gb|EAU35788.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1339

 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 68/118 (57%), Gaps = 1/118 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF       + I + L + GI F    + +  + +   L +FR       LLMD  
Sbjct: 939  EKIIIFYDNNNSAYWIAEGLELLGIDFRIYANTLKPALRTAYLKLFRESEDVRVLLMDLR 998

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             AS GL ++  +RVF++ PIW  ++E Q I RAHR+G  RP+ VETL ++ T+E++ML
Sbjct: 999  QASHGLHIANASRVFIVNPIWQPNVESQAIKRAHRIGQRRPVFVETLVLKDTLEDKML 1056



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 11/130 (8%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
           R  L   TLI+VP  L++HW+ +IQ H    ++     +    P   +L  +YD+V+ + 
Sbjct: 438 RRLLGHGTLIIVPPNLMNHWEHEIQSHTEGLKVLTLRTSSDVTPEPEAL-LEYDIVLFSR 496

Query: 669 NRLSAEWG----------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
            R   E G          R  +S + ++HWLR+++DEGH +      TN + +   L   
Sbjct: 497 IRFEKEAGEVVNNRRHSIRPVESKLTKIHWLRIIVDEGHNVAGHGQKTNMVHVLNQLHVE 556

Query: 719 NRWLLTGTPT 728
            RW+++GTP+
Sbjct: 557 RRWIVSGTPS 566


>gi|295673658|ref|XP_002797375.1| DNA repair protein RAD16 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226282747|gb|EEH38313.1| DNA repair protein RAD16 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1084

 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 20/190 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVW-TDHKKPSAHSLAWDYDVVITTFN 669
           + + TL+V P  L+  W+++I+  V    +L   ++   H+   A+SL+  +DVVITT+ 
Sbjct: 340 VGKGTLVVAPLALIKQWESEIESKVEATHRLRTCIYHGTHRTKYANSLSQ-FDVVITTYG 398

Query: 670 RLSAEWGRRKKSPM--MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            LS+E    ++ P      HW RV+LDE HT+ +        Q A SL +  RW LTGTP
Sbjct: 399 TLSSEHANSEEKPTGCFATHWYRVVLDEAHTIKN--RNAKATQAACSLKSEYRWCLTGTP 456

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHR 783
             N     L  LQ ++ FL  + Y  +  +W   I +P    +  GR     R LQ+  +
Sbjct: 457 MQNN----LDELQSLINFLRIKPY-NDLASWRDQITKP----LNNGRGGLAIRRLQVYLK 507

Query: 784 CMISARKTDL 793
             +  R  D+
Sbjct: 508 AFMKRRTKDV 517



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L  A I +A     M +  +  SLD  R+      LL    +
Sbjct: 855  KFIVFSFFTSMLTKIEPFLKSANIGYARYDGAMRNDLRENSLDRLRNSPKTRVLLCSLRA 914

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  L +R TVEE++++ L
Sbjct: 915  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTIDVKIYKLTVRNTVEERIVD-L 973

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 974  QERKR 978


>gi|378731634|gb|EHY58093.1| hypothetical protein HMPREF1120_06111 [Exophiala dermatitidis
            NIH/UT8656]
          Length = 1275

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 79/140 (56%), Gaps = 7/140 (5%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+I+F         I + L +  ++F    + +  + +   L  F    +   LLMD  
Sbjct: 964  EKIIVFYDSNNIAFWIAEALELLSVQFLIYANTLSVNRRAAYLATFNTSETFRVLLMDLK 1023

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             AS GL ++  +RVF++ PIW   +E Q I RAHR+G TRP++VETL +RGT+E+++L  
Sbjct: 1024 QASHGLHVACASRVFIVSPIWQPGVESQAIKRAHRIGQTRPVYVETLVLRGTLEDKIL-- 1081

Query: 1111 LQDTDRCRRLLKEELVKPER 1130
                +R +++   ELV+ E+
Sbjct: 1082 ----NRRQQMSNAELVRAEK 1097



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 16/134 (11%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--PSAHSLAWDYDVVITT 667
           + L  ATL++VP  L+  W+ + ++H  PG L + V     K  P    L   YDVV+ T
Sbjct: 418 MRLCYATLLIVPPNLLVQWQHEFEKHTEPGALDILVLESSTKEIPDYREL-MKYDVVLIT 476

Query: 668 FNRLSAEW-------GRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
            +R   E+       GRR       +S + QV WLRV+ DEGH    S   TN + M   
Sbjct: 477 KSRFEQEYRDDDQNLGRRMPGQGKFESQLTQVRWLRVICDEGHGFAGSSYRTNAMAMLDK 536

Query: 715 LTASNRWLLTGTPT 728
           ++   RW+++GTP+
Sbjct: 537 MSIERRWVVSGTPS 550



 Score = 43.9 bits (102), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 7/102 (6%)

Query: 160 MPCMKLKLFPHQQAAVEWMLHREWN-AEVL--RHPLYIDLATEDGFYFYVNTVSGDIATG 216
           +P +K  L+ +Q+ +   ML RE N  + L  R P Y D+    G  FY++ + G +   
Sbjct: 239 IPGLKTTLYQYQKRSAAAMLQREANPGKSLDPRKPRYKDI---HGKEFYLDVLEG-VLLS 294

Query: 217 TAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDG 258
                 +  GG+  +  G GKT+  ++LIL T+G     P+G
Sbjct: 295 HPYLYSEPRGGILAETMGYGKTLICIALILATRGHYPAIPEG 336


>gi|303311435|ref|XP_003065729.1| SNF2 family N-terminal domain containing protein [Coccidioides
            posadasii C735 delta SOWgp]
 gi|240105391|gb|EER23584.1| SNF2 family N-terminal domain containing protein [Coccidioides
            posadasii C735 delta SOWgp]
          Length = 1271

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 1/118 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +   +   + + L + G++F    S +    K + L +F +      LLMD  
Sbjct: 940  EKIIIFYENNNNAFWVAEGLEMLGVEFRIYASTLKPKLKAEYLALFNNSECVRVLLMDLR 999

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             AS GL L+  +R+F++ PIWD ++E Q I RAHR+   +P++VETL ++ T+E++ML
Sbjct: 1000 QASHGLHLASASRIFIINPIWDPNIESQAIKRAHRISQMKPVYVETLVLKDTLEDKML 1057



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 7/130 (5%)

Query: 605 LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVV 664
           + S  L L+  TL++VP  LVDHW  +I++H    ++ +      + P A  L   YD+V
Sbjct: 418 IKSSYLRLASGTLVIVPPNLVDHWLHEIEKHTEGLKVLVLRDVSDRLPPADEL-LQYDIV 476

Query: 665 ITTFNRLSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
           +   +R   E    +       SP+ ++HWLR+++DEGH   SS   +N +     L   
Sbjct: 477 LFARSRFEKEKAGFEHHWAIYDSPLKELHWLRIIVDEGHNFASSGGKSNAIHFLEMLHVE 536

Query: 719 NRWLLTGTPT 728
            RW+++GTP+
Sbjct: 537 RRWVVSGTPS 546


>gi|440803231|gb|ELR24140.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
            castellanii str. Neff]
          Length = 1736

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K +IFSQF   + +IE  L    + +  +   M  + ++  +  F+ D+S    L+   +
Sbjct: 1581 KCLIFSQFTMCLDLIELSLHTENVDYTRLDGSMTKAQRVSEIARFKADSSVAVFLISLKT 1640

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             + GL+L+  + +FLM+P W+ S E+Q I RAHR+G  RP+ V    +R ++EE++L+ L
Sbjct: 1641 GNCGLNLTHASHIFLMDPWWNPSAEQQAIDRAHRLGQERPVTVIRFIIRDSIEERILD-L 1699

Query: 1112 QDTDR 1116
            QD  R
Sbjct: 1700 QDKKR 1704



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 28/213 (13%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            + TLIV P  ++D W  +I+  V+  QL + V+  + +    S     DVV+TT+  L+A
Sbjct: 1003 KTTLIVCPLSMLDQWLDEIRNRVKGSQLQVNVYYGNSRIKDASWLKKCDVVLTTYGTLAA 1062

Query: 674  EWGRRKKSP------------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRW 721
            E+  R K              +  V W R++LDE H + ++   T K     S+ A  RW
Sbjct: 1063 EFVTRGKGKNARASLSRPLGCLESVPWYRIVLDEAHLIKNAGTRTCK--AVCSMQADRRW 1120

Query: 722  LLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLL 781
             LTGTP  N+    L  +  +L FL  E +  +   W+  I++P       G  RL  +L
Sbjct: 1121 CLTGTPIQNS----LEDVYSLLHFLRVENF-NDPWWWNLMIIKPIRRNDSTGFVRLQNVL 1175

Query: 782  HRCMI---SARKTDLQTI---PLCI---KEVTF 805
               ++      K D Q I   P C    KE+ F
Sbjct: 1176 QTVLLRRTREHKIDGQPIVSLPPCKIVQKEIEF 1208


>gi|320039594|gb|EFW21528.1| SNF2 family helicase [Coccidioides posadasii str. Silveira]
          Length = 1271

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 1/118 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +   +   + + L + G++F    S +    K + L +F +      LLMD  
Sbjct: 940  EKIIIFYENNNNAFWVAEGLEMLGVEFRIYASTLKPKLKAEYLALFNNSECVRVLLMDLR 999

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             AS GL L+  +R+F++ PIWD ++E Q I RAHR+   +P++VETL ++ T+E++ML
Sbjct: 1000 QASHGLHLASASRIFIINPIWDPNIESQAIKRAHRISQMKPVYVETLVLKDTLEDKML 1057



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 7/130 (5%)

Query: 605 LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVV 664
           + S  L L+  TL++VP  LVDHW  +I++H    ++ +      + P A  L   YD+V
Sbjct: 418 IKSSYLRLASGTLVIVPPNLVDHWLHEIEKHTEGLKVLVLRDVSDRLPPADEL-LQYDIV 476

Query: 665 ITTFNRLSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
           +   +R   E    +       SP+ ++HWLR+++DEGH   SS   +N +     L   
Sbjct: 477 LFARSRFEKEKAGFEHHWAIYDSPLKELHWLRIIVDEGHNFASSGGKSNAIHFLEMLHVE 536

Query: 719 NRWLLTGTPT 728
            RW+++GTP+
Sbjct: 537 RRWVVSGTPS 546


>gi|258565611|ref|XP_002583550.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237907251|gb|EEP81652.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 1056

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 12/202 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR-- 670
           ++ TL+V P   V +W TQI++H+  G L  +V+    +    +   +YD+VITT++   
Sbjct: 476 AKTTLLVSPLSAVGNWTTQIKEHLHEGSLSYYVFHGPSRTEDPAQLAEYDLVITTYSTVL 535

Query: 671 --LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
             LS +  +RK SP+ Q+++ R++LDE H +       +  Q   SL A  RW +TGTP 
Sbjct: 536 SDLSLKSSKRKASPLAQLNFFRIVLDEAHAIREQSGAQS--QAIFSLNAQRRWSVTGTPI 593

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
            N    +L  L  + +FL    + +  + +   I+ PF+ E     + L   +    +  
Sbjct: 594 QN----RLEDLGSVARFLRLFPFNEKGR-FAAHIIAPFKCENPNAITTLRVFIDSFTLR- 647

Query: 789 RKTDLQTIPLCIKEVTFLNFTE 810
           R  D   +P    +   L F+E
Sbjct: 648 RVKDRIDLPPRNDQTVLLTFSE 669



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 10/165 (6%)

Query: 985  ESNKALPD----KVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDMFRH 1039
            E +K  PD    K ++FS +  H+ +IE  L  +GI  F  +   M    +  +LD FR 
Sbjct: 890  EESKRSPDQPPIKSVVFSAWTSHLDLIEIALQDSGITGFTRLDGTMSLKQRNAALDAFRD 949

Query: 1040 DASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLA 1098
            D +   LL   G+  +GL+L+  +RV++MEP ++ +   Q I R HR+G TR +      
Sbjct: 950  DDNITVLLATLGAGGVGLNLTSASRVYVMEPQYNPAAVAQAIDRVHRLGQTREVTTVQFI 1009

Query: 1099 MRGTVEEQMLEFLQDTDRCRRLL----KEELVKPEREGARSHRTL 1139
            M+ ++EE++ E  +   +   +     K +  +P  E  + +R+L
Sbjct: 1010 MKESIEEKIAELAKKKQQLANMSLNRGKSDKREPMEERMKEYRSL 1054


>gi|380492539|emb|CCF34530.1| SNF2 super family RAD5 protein, partial [Colletotrichum
           higginsianum]
          Length = 635

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 11/216 (5%)

Query: 613 SRATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           +RATL+VV S  L+++W ++IQ H  PG L + V+   K+          ++V+TT+  +
Sbjct: 308 TRATLVVVSSAQLLENWVSEIQSHFLPGALSVVVFHGPKRSENFGSLTSANIVLTTYATV 367

Query: 672 SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
            AE   + K  +  + W R++LDE H + ++   + + +    L+A NRW LTGTP  N 
Sbjct: 368 VAE--DKGKKLIQALKWFRIVLDEAHWIRNA--SSKQFKAVAKLSARNRWCLTGTPIQN- 422

Query: 732 PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              +L  +  +  FL  E +     ++  G+L P     ++    L   L R +   R  
Sbjct: 423 ---RLEDIASLAAFLQLEPF-PTMASFRKGVLDPLSHGGKDFAKPLRSWL-RAVCIRRTE 477

Query: 792 DLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI 827
            L  +P C +EV  +  +E     Y +++   +R+I
Sbjct: 478 KLLQLPDCREEVVTVFLSETERQLYVQVLHRTKRDI 513


>gi|119193650|ref|XP_001247431.1| hypothetical protein CIMG_01202 [Coccidioides immitis RS]
          Length = 1034

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 30/207 (14%)

Query: 604 PLDSVRL--YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD- 660
           P D  ++   + + TLIV P  L+  W+++I+  +   +  L V   H  P    +A D 
Sbjct: 307 PKDKAKVPDKVGKGTLIVAPVALIKQWESEIESKIESTR-RLNVGVYHG-PGRAKIAKDL 364

Query: 661 --YDVVITTFNRLSAEWGRRKKSPMMQ--------VHWLRVMLDEGHTLGSSLNLTNKLQ 710
             YDVVITT+  LS+E G   K+            +HW R++LDE HT+ +        Q
Sbjct: 365 AKYDVVITTYGTLSSEHGGSSKTKDTSDGKPGCFGIHWYRIVLDEAHTIKN--RNAKSTQ 422

Query: 711 MAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEM 770
              +L +  RW LTGTP  N     L  LQ +++FL  + Y  +  AW   I RP    +
Sbjct: 423 AVYALDSLYRWCLTGTPMQNN----LDELQSLIRFLQIKPY-DDLAAWRDQITRP----L 473

Query: 771 EEGRS----RLLQLLHRCMISARKTDL 793
             GR     R LQ+  +  +  R  D+
Sbjct: 474 NNGRGGLAIRRLQIYLKAFMKRRTKDV 500



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L  AGI +A     M +  +  SL+  RH +S   LL    +
Sbjct: 802  KFIVFSVFTSMLDKIEPFLKSAGIGYARYDGGMRNDLREASLEKLRHSSSTRVLLCSLRA 861

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  + ++ TVEE++L+ L
Sbjct: 862  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKVYKMTIKDTVEERILD-L 920

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 921  QERKR 925


>gi|444914226|ref|ZP_21234370.1| SNF2-related Helicase-like protein [Cystobacter fuscus DSM 2262]
 gi|444714779|gb|ELW55654.1| SNF2-related Helicase-like protein [Cystobacter fuscus DSM 2262]
          Length = 1282

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 67/121 (55%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            + ++FSQF  H+ ++ ++L  AG  +  +     ++ + K +  F+     L L+   + 
Sbjct: 1113 RALVFSQFTSHLELVREELERAGFTYQYLDGSTPAAARAKRIQAFQDGEGELFLISLKAG 1172

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
              G++L+    V  +EP W+ ++E+Q   RAHR+G TRP+ V  L  RGT+EEQ+L    
Sbjct: 1173 GTGINLTAADYVIHLEPWWNPAVEDQATDRAHRIGQTRPVTVYRLVARGTIEEQILSLHS 1232

Query: 1113 D 1113
            D
Sbjct: 1233 D 1233


>gi|392863327|gb|EAS35938.2| SNF2 family helicase/ATPase [Coccidioides immitis RS]
          Length = 1048

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 30/207 (14%)

Query: 604 PLDSVRL--YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD- 660
           P D  ++   + + TLIV P  L+  W+++I+  +   +  L V   H  P    +A D 
Sbjct: 321 PKDKAKVPDKVGKGTLIVAPVALIKQWESEIESKIESTR-RLNVGVYHG-PGRAKIAKDL 378

Query: 661 --YDVVITTFNRLSAEWGRRKKSPMMQ--------VHWLRVMLDEGHTLGSSLNLTNKLQ 710
             YDVVITT+  LS+E G   K+            +HW R++LDE HT+ +        Q
Sbjct: 379 AKYDVVITTYGTLSSEHGGSSKTKDTSDGKPGCFGIHWYRIVLDEAHTIKN--RNAKSTQ 436

Query: 711 MAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEM 770
              +L +  RW LTGTP  N     L  LQ +++FL  + Y  +  AW   I RP    +
Sbjct: 437 AVYALDSLYRWCLTGTPMQNN----LDELQSLIRFLQIKPY-DDLAAWRDQITRP----L 487

Query: 771 EEGRS----RLLQLLHRCMISARKTDL 793
             GR     R LQ+  +  +  R  D+
Sbjct: 488 NNGRGGLAIRRLQIYLKAFMKRRTKDV 514



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L  AGI +A     M +  +  SL+  RH +S   LL    +
Sbjct: 816  KFIVFSVFTSMLDKIEPFLKSAGIGYARYDGGMRNDLREASLEKLRHSSSTRVLLCSLRA 875

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  + ++ TVEE++L+ L
Sbjct: 876  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKVYKMTIKDTVEERILD-L 934

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 935  QERKR 939


>gi|326437899|gb|EGD83469.1| hypothetical protein PTSG_04077 [Salpingoeca sp. ATCC 50818]
          Length = 1562

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 1/117 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K I+FSQ+   + +I++ +   G   A +   M    + ++L  F+ D +C   L+   
Sbjct: 1397 NKCIVFSQWTSMLDLIQRAVESGGYTTARLDGSMSQQERSRALATFKSDPTCTVFLITLR 1456

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            S  +GL+L+  + V LM+P W+ S+EEQ I R HR+G  +P+ V+   M GTVEE++
Sbjct: 1457 SGGVGLNLTAASHVMLMDPWWNPSVEEQAIDRVHRIGQDKPVCVKRFIMLGTVEERI 1513



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 12/92 (13%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLR---------HPLYIDLATEDGFYFYVNTVSGDI 213
           M  +L  +Q+ A+ WM+ RE   E+ R         HP+Y  LA  DG   Y +     +
Sbjct: 588 MTCQLRSYQKQALGWMIERE---ELTRSSAKSKDQLHPMYKQLAFPDGTPLYWSDSLCVL 644

Query: 214 ATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
            +   P    F GG+  D  GLGKT+ AL+LI
Sbjct: 645 TSVFPPASEQFRGGILADAMGLGKTVQALALI 676



 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 7/109 (6%)

Query: 683  MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPM 742
            +   H+ R++LDE H + +   +  K      L+A  RW +TGTP  N     L  +  +
Sbjct: 941  LFSFHFWRIILDEAHLIKNRSTIGAK--ACYRLSAQRRWAMTGTPIQN----HLEDVFSL 994

Query: 743  LKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
            LKFLH E +  +   W   I   F  + +    RL  +L   ++   KT
Sbjct: 995  LKFLHLEPWC-SWGVWREHIQSIFSEDEDRAVERLQMVLQPILLRRTKT 1042


>gi|66812364|ref|XP_640361.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
 gi|60468377|gb|EAL66383.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
          Length = 1640

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 41/233 (17%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRP---GQLHLFVW---TDHKKPSAHSLAWDYDVVITT 667
            +ATLI+ P  LV  WK++I++H++P    +L +F +      KK S   L    D+VITT
Sbjct: 1044 KATLIICPPSLVSQWKSEIKKHLKPDYFNKLEIFEYHGANRKKKLSGVDLNL-MDIVITT 1102

Query: 668  FNRLSAEWGRRKKS-------------------PMMQVHWLRVMLDEGHTLGSSLNLTNK 708
             N    E+ + ++                     ++ +HW RV++DE         +   
Sbjct: 1103 HNTFGIEFKKYEEDMQSAYTNNANGNDGSIPLPALLTIHWWRVIIDESQVCKIKTLIFKG 1162

Query: 709  LQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEA 768
            LQ   +L A ++W L+GTP  N     L  + P L FL+     Q+ K W   I RP   
Sbjct: 1163 LQ---NLDAIHKWCLSGTPISNY----LDDIYPSLHFLNCYPIAQDLKTWRKLIDRPKNL 1215

Query: 769  EMEEGRSRLLQLLHRCMISARKTDLQ--TIPLCIKEVTFLNFTEEHAGTYNEL 819
            E+      L ++++  ++   K+++    +P   KE+ +L+F E  A  Y+ L
Sbjct: 1216 EL------LKKVINPILLRREKSEILDFKLPKKNKEIVYLDFNENEADDYDTL 1262



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 9/126 (7%)

Query: 992  DKVIIFSQFLEHIHVIEQQL-------TVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCL 1044
            +K +I SQ+   + +IE+ L           +++ G  S       IK L+    D   +
Sbjct: 1476 EKCLIVSQWTSMLDLIEESLKQNHWVKNTHYVRYDGRCSHQQKDKAIKQLN--EDDDVRV 1533

Query: 1045 ALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVE 1104
             L+   S  +GL+L+   RV++++P W+ + E Q   R HR+G TR + V+   M  ++E
Sbjct: 1534 MLVSLKSGGVGLNLTRANRVYMVDPWWNEASEVQAEGRVHRIGQTREVFVKRYIMNNSIE 1593

Query: 1105 EQMLEF 1110
             ++LE 
Sbjct: 1594 IRILEL 1599



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 16/97 (16%)

Query: 163  MKLKLFPHQQAAVEWMLHRE------WNAEVLRH-------PLYIDLATEDGFYFYVNTV 209
            +K +L  HQ+  + WML RE      +N  V  +       P+  + A+     FY N +
Sbjct: 910  LKSQLKHHQKEGLWWMLGREQKPFITYNMSVEEYWRLYKTSPIVGEAAS---VEFYYNCI 966

Query: 210  SGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
               I+     +     GG+ CDE GLGKT+ +++LI+
Sbjct: 967  CDKISLTPPKSKHKIAGGLLCDEMGLGKTVMSIALIM 1003


>gi|432931352|ref|XP_004081668.1| PREDICTED: transcription termination factor 2-like [Oryzias
           latipes]
          Length = 1112

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 38/243 (15%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           +  S  TLI+ P+ L+ HWK +I + V+  +L ++++    +  +  +  D+DVV+TT++
Sbjct: 582 IVASEGTLIICPASLIHHWKKEIDKRVKSCRLTVYLYHGTNRQKSAKVLADHDVVVTTYS 641

Query: 670 RLSAEWGRRKK----------------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI 713
            +S E   +K+                SP ++V W RV+LDE H +    N   +  MA+
Sbjct: 642 LVSKEIEVQKEDANNPSKDPDPEASRSSPFLRVRWTRVILDEAHNIK---NPKVQTSMAV 698

Query: 714 -SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEE 772
             L A  RW +TGTP  N     L  +  +LKFL    + +  K W   +    +     
Sbjct: 699 CQLRAQARWAITGTPIQNN----LLDMYSLLKFLRCSPFDE-YKLWKAQV----DNGSNR 749

Query: 773 GRSRLLQLLHRCMISARKTD--------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
           GR R L +L + ++  R  D        L ++P    +V  L+ +EE    Y+ +    R
Sbjct: 750 GRER-LNILMKALLLRRTKDQLDSTGKPLVSLPNRTCKVHQLHLSEEEQTVYDVVFAQSR 808

Query: 825 RNI 827
             +
Sbjct: 809 STL 811


>gi|356577640|ref|XP_003556932.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Glycine max]
          Length = 1072

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 14/180 (7%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TLIV P  L+  WK +++ H + G + +FV     + +   +   +DVV+TT+  L A 
Sbjct: 535 GTLIVCPMALLSQWKDELETHSKEGSISIFVHYGGARTTDPWMISGHDVVLTTYGVLQAA 594

Query: 675 WGRRKKSPMM-QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
           +    ++ +  +V W RV+LDE H + +  N T   Q A  L++ +RW LTGTP  N+  
Sbjct: 595 YKNDGENSIYNKVKWYRVVLDEAHNIKAHRNQT--AQSAFVLSSHSRWCLTGTPLQNS-- 650

Query: 734 SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRC--MISARKT 791
             L  L  +L+F+  E +  N   W   I RP+    E G  R L+L+     M+  R+T
Sbjct: 651 --LEDLYSLLRFMRVEPWC-NLAWWQKLIQRPY----ENGDPRSLKLVKAILRMLMLRRT 703



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 4/144 (2%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K I+FSQ+     ++E  L   GI F      +    + K LD F        LLM   
Sbjct: 923  EKSIVFSQWTSFFDLLENPLRRRGIGFLRYDGKLTQKQREKVLDEFNETREKRVLLMSLK 982

Query: 1052 AS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A  +GL+L+  + VF+M+P W+ ++EEQ I R HR+G  R + V    ++ TVE+++   
Sbjct: 983  AGGVGLNLTAASNVFIMDPWWNPAVEEQAIMRIHRIGQNRRVVVRRFIVKDTVEDRL--- 1039

Query: 1111 LQDTDRCRRLLKEELVKPEREGAR 1134
             Q   R +R++   L   E   AR
Sbjct: 1040 QQVQARKQRMISGTLTDDEVRTAR 1063


>gi|405117658|gb|AFR92433.1| DNA repair protein RAD5 [Cryptococcus neoformans var. grubii H99]
          Length = 1201

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIK---FAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            KV+IFSQF   + +IE  LT  GI+   F G  S    +N I+     + D   + L+  
Sbjct: 1040 KVLIFSQFTSFLDLIETTLTKQGIRQLRFDGTMSQAQRANTIEEFGQ-KTDEPLILLISL 1098

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+L+    VFLM+  W+ ++E+Q I R HR+G  +P++V    ++GTVE+++++
Sbjct: 1099 KAGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIMK 1158

Query: 1110 F 1110
             
Sbjct: 1159 I 1159



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 28/239 (11%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHS-LAWD----YDVVITTF 668
           RATL+V P  L   W  ++++  + G ++ +VW    +    + LA D     DV++T++
Sbjct: 597 RATLVVCPVSLAAQWHDELRKMSQQGSINSYVWYGGDRVDIEALLAGDGKERVDVIVTSY 656

Query: 669 NRLSAE---WGRRKKSP------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
             LS+E   W R K  P      +    +LR++LDE H + + L + +K      L    
Sbjct: 657 GTLSSEYQKWMRIKDKPSYEGGSLYDHEFLRIVLDEAHIIRNRLAVVSK--ACYELKGQR 714

Query: 720 RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ 779
           RW LTGTP  N    +L  L  +L FL    +G +   +   +  PF  +  +  + +  
Sbjct: 715 RWALTGTPIVN----RLEDLYSLLHFLRVTPWG-DYSFFRSFVTVPFLNQDHKALNVVQY 769

Query: 780 LLHRCMISARKTD-------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMAD 831
           +L  C++   KT        +  +P    E+  L F+      Y  L    ++  +  D
Sbjct: 770 ILESCLLRREKTMRDKDGRLIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFIELD 828


>gi|134077641|emb|CAK45712.1| unnamed protein product [Aspergillus niger]
          Length = 716

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 107/239 (44%), Gaps = 42/239 (17%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH--KKPSAHSLAWDYDVVITTFNRL 671
           + TLI+ P  LV  WK +I++ VRPG+  L +W  H  K+ +       YDVV+TTF  L
Sbjct: 86  KPTLIIAPVALVQQWKREIERMVRPGKHQLSIWVLHGDKRLTTFRELKRYDVVLTTFGTL 145

Query: 672 SAEWGRRKKS------------------PMM--QVHWLRVMLDEGHTLGSSLNLTNKLQM 711
           +AE  R++K                   P++  +  W RV+ DE   +    N   K  +
Sbjct: 146 AAELKRKQKYEELEERDVNLARKALDSLPLLGRRCKWYRVIADEAQCIK---NRNAKAAL 202

Query: 712 A-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE- 769
           A   L  + RW +TGTP  N     +  L  ++KFL    Y  N + ++    RP ++  
Sbjct: 203 ACCQLNTTYRWCMTGTPMMNN----VEELHSLIKFLRIRPYC-NIETFNRDFTRPLKSSP 257

Query: 770 -MEEGRSRLLQLLHRCMISAR--------KTDLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
            M E     LQ+L + ++  R        K  LQ +P  + E     F+EE    YN L
Sbjct: 258 AMREKAMLQLQVLLKAILLRRTKSSEIDGKPILQ-LPPKVSERVHAVFSEEEQEFYNAL 315



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K IIFSQF   + ++E  +   G  +      M  +++  S+  F  +  C  +L+   
Sbjct: 522  EKTIIFSQFTSLLDLLEIPIARQGWDYRRYDGSMRPADRNTSVMDFTDNEDCRIMLVSLK 581

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A + GL+L   ++V + +P W+  +EEQ + RAHR+G  RP+ +  + ++ TVE+++LE 
Sbjct: 582  AGNAGLNLVAASQVIIFDPFWNPYVEEQAVDRAHRIGQVRPVQIHRIVVKDTVEDRILE- 640

Query: 1111 LQDTDR 1116
            LQD  R
Sbjct: 641  LQDKKR 646


>gi|328767223|gb|EGF77273.1| hypothetical protein BATDEDRAFT_91624 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 641

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 1/122 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K I+FSQF + + +IE  L    IKF      MH+  +  S+  FR D   L +L+   
Sbjct: 484  EKTIVFSQFTKMLDLIETPLGQNNIKFTRYDGSMHAKQRDDSIRRFRDDPDILVILVSLK 543

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              SLGL+L+   RV L +  W+ ++E Q I RAHR G T+ + V  + ++ +VE+++LE 
Sbjct: 544  CGSLGLNLTCANRVILTDLWWNPAVENQAIDRAHRFGQTKDVIVHRIMIKNSVEDRILEL 603

Query: 1111 LQ 1112
             Q
Sbjct: 604  QQ 605



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 43/190 (22%)

Query: 599 LALCEPLDSVRLYLS--------RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK 650
           + L + + S+ L LS        R TLIV P  L+  W+ ++   V+ G L ++++   K
Sbjct: 18  MGLGKTIQSISLILSNSPSPEDHRPTLIVAPVSLLLQWQQELADRVKKGTLKVYLYYGSK 77

Query: 651 KPSAHSLAWDYDVVITTFNRLSAEW-GRRKKS---------------------------- 681
           +          DVVIT+F  L +EW    KKS                            
Sbjct: 78  RNKDIRFLEKLDVVITSFQVLGSEWPAPTKKSKVNFDSHGDLASDDEVHEDKCLDKSLFG 137

Query: 682 PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQP 741
           P+ +  + RV+LDE H + +    T     A  L +  RW LTGTP  N     +S L  
Sbjct: 138 PLFRFKFHRVILDEAHFIKN--KRTRASIAACELQSRYRWCLTGTPVQNN----ISELYS 191

Query: 742 MLKFLHEEAY 751
           +++FL  + Y
Sbjct: 192 LIRFLRIQPY 201


>gi|383847328|ref|XP_003699306.1| PREDICTED: transcription termination factor 2-like [Megachile
           rotundata]
          Length = 927

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 21/217 (9%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TL+V P+ L+  W+ +IQ   + G L + V     + S       +DVVITT+N L+ E
Sbjct: 404 GTLVVCPASLLSQWENEIQNRCKRGMLSVVVHHGTARESIPKRLAKHDVVITTYNILARE 463

Query: 675 WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNTPN 733
           +  +KK    ++HW RV+LDE H +    N  ++  M++  L A  RW LTGTP  N   
Sbjct: 464 Y--KKKGTAYKIHWERVVLDEAHVVR---NHKSQGSMSVCELIADKRWALTGTPIQNKE- 517

Query: 734 SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDL 793
                L  +LKFL    +  + + W     R  + +   GR RL  ++   M+   K +L
Sbjct: 518 ---MDLYAILKFLKCSPF-DDLRVWK----RWVDNKNAAGRQRLATVMKALMLRRTKQEL 569

Query: 794 QT------IPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
           Q       +P    E  ++    +    Y +++V  R
Sbjct: 570 QASGALDCLPEKFIEEIYVQLEPQEQLVYEKVLVYSR 606


>gi|302680130|ref|XP_003029747.1| hypothetical protein SCHCODRAFT_58967 [Schizophyllum commune H4-8]
 gi|300103437|gb|EFI94844.1| hypothetical protein SCHCODRAFT_58967 [Schizophyllum commune H4-8]
          Length = 939

 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 31/177 (17%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           + TLIV P  ++ +W+ Q++ H  PG L    +    +  +      YDVVITT+  +S 
Sbjct: 407 KGTLIVAPLSIISNWEKQLEDHCAPGALKSCTYYGATRGMSAEELKKYDVVITTYQVISG 466

Query: 674 EW---------GRRKK-----SPMMQVHWLRVMLDEGHTLGSSLNLTNKL-QMAISLTAS 718
           EW          R+KK       +  V W R++LDEGH++    N   K+ Q   +L A 
Sbjct: 467 EWADRAGTGQPARKKKKGVAGGSLFDVKWKRIVLDEGHSI---RNPRAKMTQACCALEAD 523

Query: 719 NRWLLTGTPTPN----TPNSQLSHLQPMLKF---LHEEAYGQNQKAWDGGILRPFEA 768
            RW+LTGTP PN     P+  L  L   L+    L EE + +        +LRP +A
Sbjct: 524 RRWVLTGTPIPNLSLTAPSQDLGSLLSFLRICKPLDEEDFFKRL------LLRPLKA 574



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 19/132 (14%)

Query: 992  DKVIIFSQFLEHIHVIEQQL---TVAGIKFAGMYSPMHSSNKIK--SLDMFRHDASCLAL 1046
            DK ++FSQF   +  +  Q     +  ++F G  S       I+  S+ +   D +    
Sbjct: 810  DKSLVFSQFTSFLDKVSCQRWMRCIPYVRFDGQMSGKRREEAIRRFSVPIKPTDTAASNW 869

Query: 1047 LMDG-----------SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            L  G           + +LGL+L+    V+L    W   +E Q I R +R+G T+P+HV 
Sbjct: 870  LPGGVNPKVMLISLKAGALGLNLTVANNVYLW---WQEGIESQAIDRVNRIGQTKPVHVY 926

Query: 1096 TLAMRGTVEEQM 1107
             +    TVE ++
Sbjct: 927  QMIAEDTVESKV 938


>gi|425766293|gb|EKV04917.1| hypothetical protein PDIG_87180 [Penicillium digitatum PHI26]
 gi|425779026|gb|EKV17121.1| hypothetical protein PDIP_33200 [Penicillium digitatum Pd1]
          Length = 906

 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 77/139 (55%), Gaps = 15/139 (10%)

Query: 992  DKVIIFSQFLEHIHV---IEQQLTVAGIKFAGMYS--PMHSSNKIKSLDMFRHDASCLAL 1046
            +K+IIF    EH +V   +EQ L +  +KF    S   M S+ K K L  FR       L
Sbjct: 611  EKIIIF---YEHDNVASWVEQGLELIAVKFRTYASTASMGSNFKTKHLRDFRETDEVRVL 667

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            LM    AS GL +   +R++++ PIW+R++E Q I RAHR+G  RP+ VETL +  T+E 
Sbjct: 668  LMSVKQASHGLHIPEASRMYIVNPIWERNVESQAIKRAHRIGQKRPVFVETLVLGNTLEY 727

Query: 1106 QMLEFLQDTDRCRRLLKEE 1124
            +ML      +R + +  EE
Sbjct: 728  RML------NRSKNMTAEE 740



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 142/333 (42%), Gaps = 70/333 (21%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           + L   TL++VP  LVDHW+ +I  H+   +  L + T  + PS   L   +D+V+ +  
Sbjct: 106 IRLCSGTLVIVPDNLVDHWEREIATHISDLKF-LVLKTQDETPSTDEL-LKFDIVLFSKT 163

Query: 670 RLSAE------WGRRKKSPMMQVHWLRVMLDEGHTL-GSSLNLTNKLQMAISLTASNRWL 722
           R S E       G+R  +PM+ +HWLRV++DEGH L G    + N L+   +L    RW+
Sbjct: 164 RCSKENSKYDKSGQRPDAPMLNLHWLRVIVDEGHNLAGKQTGMVNLLR---NLKIERRWM 220

Query: 723 LTGTP-----------------TPNTPNSQLSHLQPMLK--------------------- 744
           ++GTP                 T +T +S  SH   +L+                     
Sbjct: 221 ISGTPLSEMYGVELSIASREMGTDDTQSSD-SHETAILQKSKKAGSSFNYEIKNLDKLGD 279

Query: 745 ----FLHEEAYGQNQKAW--------DGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
               F + + +  N K W        + GI R    +    R+ L  L+ R      KT+
Sbjct: 280 MVHDFFNLKPWANNTKEWPRYTKIVGEDGISR----KSPSLRATLQSLVVRHRYETVKTE 335

Query: 793 LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRST 852
           + T+P    +V +L  T       N  + T+  N + ++   P ++    + K  K   T
Sbjct: 336 I-TLPPLYNKVVYLEPTFYDRLYINLFLFTLAVNAITSEREGPDYMFDESDEKDKKINKT 394

Query: 853 TIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVE 885
            +  L  +  +AG     D  +++Q T+D+ +E
Sbjct: 395 KLTELIQNLRLAGFWWAGD--DNVQSTVDIALE 425


>gi|440799914|gb|ELR20957.1| helicase C-terminal domain containing protein, putative [Acanthamoeba
            castellanii str. Neff]
          Length = 725

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 5/135 (3%)

Query: 984  LESNKALPD--KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSS--NKIKSLDMFRH 1039
            L+  + LP+  K IIFSQF+  + ++ Q L   G+ F   +   HSS   +  +L  F  
Sbjct: 388  LDRLQQLPEGSKAIIFSQFVHVLLILRQALRHVGLPFCEFFYGSHSSPAARASALTTFNT 447

Query: 1040 DASCLALLMDGS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLA 1098
                  +LM    A+ G++L+  + VF ++ +WD S+E Q I RAHR+G T+ + VE L 
Sbjct: 448  SDYVRVILMKTELAAFGINLTAASHVFFVDQVWDPSVERQAIKRAHRIGQTKEVFVEKLV 507

Query: 1099 MRGTVEEQMLEFLQD 1113
            M  T+E  +L F QD
Sbjct: 508  MENTIEATILTFNQD 522



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 7/115 (6%)

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
            ++L HL  +L FL  E +  +++ W   I+RP    +     RLL +L + MI  ++ D
Sbjct: 2   ETELEHLFGLLMFLGHEPFC-DRRVWADYIVRPIRKGVAAAEQRLLDILSQVMIKNKQED 60

Query: 793 LQ---TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNP 844
           +     +P C   V  L   +     YNE+V  ++ N++ +  + P   +S L+P
Sbjct: 61  IDKEIALPECHTSVVQLKLNDSERQKYNEIVSQIKTNLIASRGSGP---DSFLHP 112


>gi|345566232|gb|EGX49176.1| hypothetical protein AOL_s00078g560 [Arthrobotrys oligospora ATCC
            24927]
          Length = 777

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 3/130 (2%)

Query: 983  NLESN--KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHD 1040
            NL SN       K ++FS + + + ++E  L   GI F  M   + +  + + L  FR+D
Sbjct: 613  NLISNLQSGFSGKSVVFSCWTKMLDLVEVALKSNGIGFTRMEGSLTTRERKEHLHTFRND 672

Query: 1041 ASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAM 1099
             +C   L   GS S GLDL+  + V L+EP ++  +EEQ ++R HR+G T P+      M
Sbjct: 673  PNCRVFLSTLGSGSTGLDLTVASEVHLLEPQFNPMLEEQALARVHRIGQTNPVTTIRYIM 732

Query: 1100 RGTVEEQMLE 1109
            R + EEQ+LE
Sbjct: 733  RNSYEEQILE 742


>gi|346323374|gb|EGX92972.1| SNF2 family helicase/ATPase, putative [Cordyceps militaris CM01]
          Length = 1152

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 73/124 (58%), Gaps = 9/124 (7%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW-TDHKKPSAHSLAWDYDVVITTFNRL 671
           SRATLIV P   V +W+ Q++QHV+PG L++ ++   ++   A SLA  +DVV+TT+  +
Sbjct: 591 SRATLIVCPLSTVTNWEEQVKQHVKPGALNVHIYHGPNRIRDAVSLA-SFDVVVTTYGSV 649

Query: 672 SAEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
           S E   RK+      P+ ++ W R++LDE H +      T + +    L ++ +W +TGT
Sbjct: 650 SNELSSRKRGKHGQYPLEEIGWFRIVLDEAHMIRE--QSTVQFKAICRLQSARKWAVTGT 707

Query: 727 PTPN 730
           P  N
Sbjct: 708 PVQN 711



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FS +  H+ +IE  L  A I F  +   M  + +  ++D FR D +   +L+  
Sbjct: 995  PYKSVVFSGWTSHLTLIELALKAADIAFTRLDGTMSRAARTAAMDKFREDDNIHVILVSI 1054

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  LGL+L+    V++MEP ++ + E Q + R HR+G  RP+      MR + EE+M+E
Sbjct: 1055 MAGGLGLNLTSGNSVYVMEPQFNPAAEAQAVDRVHRLGQKRPVKTVRYIMRNSFEEKMVE 1114

Query: 1110 F 1110
             
Sbjct: 1115 L 1115


>gi|303311897|ref|XP_003065960.1| SNF2 family N-terminal domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240105622|gb|EER23815.1| SNF2 family N-terminal domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 1048

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 30/207 (14%)

Query: 604 PLDSVRL--YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD- 660
           P D  ++   + + TLIV P  L+  W+++I+  +   +  L V   H  P    +A D 
Sbjct: 321 PKDKAKVPDKVGKGTLIVAPVALIKQWESEIESKIESTR-RLNVGVYHG-PGRAKIATDL 378

Query: 661 --YDVVITTFNRLSAEWGRRKKSP--------MMQVHWLRVMLDEGHTLGSSLNLTNKLQ 710
             YDVVITT+  LS+E G   K+            +HW R++LDE HT+ +        Q
Sbjct: 379 AKYDVVITTYGTLSSEHGGSSKTKDTTDGKPGCFGIHWYRIVLDEAHTIKN--RNAKSTQ 436

Query: 711 MAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEM 770
              +L +  RW LTGTP  N     L  LQ +++FL  + Y  +  AW   I RP    +
Sbjct: 437 AVYALDSLYRWCLTGTPMQNN----LDELQSLIRFLQIKPY-DDLAAWRDQISRP----L 487

Query: 771 EEGRS----RLLQLLHRCMISARKTDL 793
             GR     R LQ+  +  +  R  D+
Sbjct: 488 NNGRGGLAIRRLQVYLKAFMKRRTKDV 514



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L  AGI +A     M +  +  SL+  RH +S   LL    +
Sbjct: 816  KFIVFSVFTSMLDKIEPFLESAGIGYARYDGGMRNGLREASLEKLRHSSSTRVLLCSLRA 875

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  + ++ TVEE++L+ L
Sbjct: 876  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKVYKMTIKDTVEERILD-L 934

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 935  QERKR 939


>gi|225559892|gb|EEH08174.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
 gi|225559942|gb|EEH08224.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 1209

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 85/155 (54%), Gaps = 8/155 (5%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +       I + L + G++F    + + +  + + L +F    +   LLMD  
Sbjct: 932  EKIIIFYEGNNTGFYIAEGLELLGVEFRIYANTLKTKTRSEYLSLFNETETVRVLLMDLR 991

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             A+ GL ++  +RVF++ PIWD + E Q I RAHR+   +P++VETL ++ T+E++ML  
Sbjct: 992  QAAHGLHIACASRVFIVNPIWDPNFESQAIKRAHRISQNKPVYVETLVLKDTLEDRMLR- 1050

Query: 1111 LQDTDRCRRLLKEELVKPEREGARSHRTLHDFAES 1145
                 R +++   EL   E++     RT+ D  ++
Sbjct: 1051 -----RRKQMSNAELRHAEKD-PLDDRTMSDIIQT 1079



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 19/136 (13%)

Query: 607 SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK--KPSAHSLAWDYDVV 664
           + +L L   TLI+VPS LVDHW ++I +H +   L + V  D +   P    L  +YD++
Sbjct: 424 ATKLQLCSGTLIIVPSNLVDHWLSEIDKHTQ--GLKVLVLRDSRCATPQPEQL-LEYDIL 480

Query: 665 ITTFNRLSAEW---GRR---------KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
           +  F++   EW   GRR         ++SP+ ++HWLRV++DEGH   +    +      
Sbjct: 481 L--FSKPRFEWEAGGRRSSGLSMEPTEESPLKKLHWLRVIVDEGHNFAAKGGRSTAAHTL 538

Query: 713 ISLTASNRWLLTGTPT 728
             L    RW+++GTP+
Sbjct: 539 GQLHIERRWVVSGTPS 554


>gi|237835405|ref|XP_002367000.1| helicase conserved C-terminal domain-containing protein [Toxoplasma
            gondii ME49]
 gi|211964664|gb|EEA99859.1| helicase conserved C-terminal domain-containing protein [Toxoplasma
            gondii ME49]
          Length = 2744

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 21/201 (10%)

Query: 678  RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP-NTPNSQL 736
            R +SP++ +HW R+++DEGH+L  S      +Q+   + A  RW+LTGTPT   +    L
Sbjct: 1486 RSRSPLLSIHWQRLVVDEGHSL--SRCTAQYVQLCRMIVADKRWVLTGTPTSRQSLRHSL 1543

Query: 737  SHLQPMLKFL---------HEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHR 783
            + L  +L+FL         H              I RP    +E G +    +L  LL+ 
Sbjct: 1544 TGLTALLEFLRHPFALPYRHCGVSATKTSPLKAAICRPL---LERGEASALFQLALLLNT 1600

Query: 784  CMISARKTDLQTIPLCIKEVTF-LNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
            C++   K   Q +P       + +  + +   TYN+LV  ++RN+    ++   + +SLL
Sbjct: 1601 CLVRHSKEQCQRLPALRGPTIYRIEPSAKERTTYNDLVQLMQRNLFCTYYSR-KNKDSLL 1659

Query: 843  NPKQWKFRSTTIRNLRLSCCV 863
            +P Q    ST++ NLR SC +
Sbjct: 1660 HPSQRAQASTSLWNLRFSCTI 1680



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 16/133 (12%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMH-SSNKIKSLDMFRHDASCLALLMDGS 1051
            K+I+ S   E++ ++   L    +K    Y  M   +N++++L  F+ D   + LL+   
Sbjct: 2534 KIIVASSLWENLFLLGCFLEKHSVKCCHFYEKMQDKTNRVEALKSFQQDTETMVLLLSTQ 2593

Query: 1052 -ASLGLDLSFVTRVFLMEPIWDRSMEEQV--------------ISRAHRMGATRPIHVET 1096
              + GLDLS  + V L +P  D ++E+QV              ISRAHRMGA R +HVE 
Sbjct: 2594 LGAHGLDLSCASHVLLPDPPTDPNVEQQVSRDVYRLLFLHLQVISRAHRMGALRDVHVEI 2653

Query: 1097 LAMRGTVEEQMLE 1109
              ++ TVEE +L+
Sbjct: 2654 FILKDTVEETILQ 2666



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 23/27 (85%)

Query: 226 GGMFCDEPGLGKTITALSLILKTQGTL 252
           GG+FCD+PGLGKT+  LS+++K+ G L
Sbjct: 763 GGLFCDDPGLGKTLAMLSVMVKSMGRL 789


>gi|320039914|gb|EFW21848.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira]
          Length = 1048

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 30/207 (14%)

Query: 604 PLDSVRL--YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD- 660
           P D  ++   + + TLIV P  L+  W+++I+  +   +  L V   H  P    +A D 
Sbjct: 321 PKDKAKVPDKVGKGTLIVAPVALIKQWESEIESKIESTR-RLNVGVYHG-PGRAKIATDL 378

Query: 661 --YDVVITTFNRLSAEWGRRKKSP--------MMQVHWLRVMLDEGHTLGSSLNLTNKLQ 710
             YDVVITT+  LS+E G   K+            +HW R++LDE HT+ +        Q
Sbjct: 379 AKYDVVITTYGTLSSEHGGSSKTKDTTDGKPGCFGIHWYRIVLDEAHTIKN--RNAKSTQ 436

Query: 711 MAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEM 770
              +L +  RW LTGTP  N     L  LQ +++FL  + Y  +  AW   I RP    +
Sbjct: 437 AVYALDSLYRWCLTGTPMQNN----LDELQSLIRFLQIKPY-DDLAAWRDQISRP----L 487

Query: 771 EEGRS----RLLQLLHRCMISARKTDL 793
             GR     R LQ+  +  +  R  D+
Sbjct: 488 NNGRGGLAIRRLQVYLKAFMKRRTKDV 514



 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   +  IE  L  AGI +A     M +  +  SL+  RH +S   LL    +
Sbjct: 816  KFIVFSVFTSMLDKIEPFLESAGIGYARYDGGMRNGLREASLEKLRHSSSTRVLLCSLRA 875

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  + ++ TVEE++L+ L
Sbjct: 876  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKVYKMTIKDTVEERILD-L 934

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 935  QERKR 939


>gi|221506326|gb|EEE31961.1| helicase, putative [Toxoplasma gondii VEG]
          Length = 2744

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 21/201 (10%)

Query: 678  RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP-NTPNSQL 736
            R +SP++ +HW R+++DEGH+L  S      +Q+   + A  RW+LTGTPT   +    L
Sbjct: 1486 RSRSPLLSIHWQRLVVDEGHSL--SRCTAQYVQLCRMIVADKRWVLTGTPTSRQSLRHSL 1543

Query: 737  SHLQPMLKFL---------HEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHR 783
            + L  +L+FL         H              I RP    +E G +    +L  LL+ 
Sbjct: 1544 TGLTALLEFLRHPFALPYRHCGVSATKTSPLKAAICRPL---LERGEASALFQLALLLNT 1600

Query: 784  CMISARKTDLQTIPLCIKEVTF-LNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
            C++   K   Q +P       + +  + +   TYN+LV  ++RN+    ++   + +SLL
Sbjct: 1601 CLVRHSKEQCQRLPALRGPTIYRIEPSAKERTTYNDLVQLMQRNLFCTYYSR-KNKDSLL 1659

Query: 843  NPKQWKFRSTTIRNLRLSCCV 863
            +P Q    ST++ NLR SC +
Sbjct: 1660 HPSQRAQASTSLWNLRFSCTI 1680



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 16/133 (12%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMH-SSNKIKSLDMFRHDASCLALLMDGS 1051
            K+I+ S   E++ ++   L    +K    Y  M   +N++++L  F+ D   + LL+   
Sbjct: 2534 KIIVASSLWENLFLLGCFLEKHSVKCCHFYEKMQDKTNRVEALKSFQQDTETMVLLLSTQ 2593

Query: 1052 -ASLGLDLSFVTRVFLMEPIWDRSMEEQV--------------ISRAHRMGATRPIHVET 1096
              + GLDLS  + V L +P  D ++E+QV              ISRAHRMGA R +HVE 
Sbjct: 2594 LGAHGLDLSCASHVLLPDPPTDPNVEQQVSRDVYRLLFLHLQVISRAHRMGALRDVHVEI 2653

Query: 1097 LAMRGTVEEQMLE 1109
              ++ TVEE +L+
Sbjct: 2654 FILKDTVEETILQ 2666



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 23/27 (85%)

Query: 226 GGMFCDEPGLGKTITALSLILKTQGTL 252
           GG+FCD+PGLGKT+  LS+++K+ G L
Sbjct: 763 GGLFCDDPGLGKTLAMLSVMVKSMGRL 789


>gi|393240570|gb|EJD48096.1| hypothetical protein AURDEDRAFT_113300 [Auricularia delicata
           TFB-10046 SS5]
          Length = 1168

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 23/150 (15%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           SR+TLIVVP  L++ W+++I+    P    +FV    K+         YD+VITT+  L+
Sbjct: 524 SRSTLIVVPGSLLEQWRSEIENKTLPETFSVFVHHGDKRLKRKKDVRKYDIVITTYGTLN 583

Query: 673 AEWGR-----------------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISL 715
           +E+ +                 R+  P+ +  W RV+LDE   + + L + + +  A SL
Sbjct: 584 SEFEKLVREKGKKAHDYIDDETRRTGPLAKTRWWRVVLDEAQFIRNRLTVAS-INTA-SL 641

Query: 716 TASNRWLLTGTPTPNTPNSQLSHLQPMLKF 745
            A +RW LTGTP  NT    L+ L P+++F
Sbjct: 642 EARHRWCLTGTPVTNT----LTDLYPLIRF 667



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 3/129 (2%)

Query: 981  RPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR-H 1039
            R N E  +   +K I++SQ+   I ++E  L   G+K       M    + K++  F+  
Sbjct: 1004 RDNAEDGRV--EKTILYSQWTSMIDLVEILLRREGLKSIRYDGQMTRGARDKAITTFKSR 1061

Query: 1040 DASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAM 1099
            +   + ++      +GL+L+  +RV  ++  W+ + E Q   R HRMG  RP+ VE L +
Sbjct: 1062 NGPDILIISLKCGGVGLNLTEASRVISLDLAWNSATENQAFDRVHRMGQQRPVFVERLVV 1121

Query: 1100 RGTVEEQML 1108
            + T+E+++L
Sbjct: 1122 KDTIEDRIL 1130


>gi|340519866|gb|EGR50103.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1133

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 10/134 (7%)

Query: 981  RPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHD 1040
            RPN++S        I+FSQF   + +IE  LT   IKF  +   M    +   L  F   
Sbjct: 979  RPNMKS--------IVFSQFTSFLSLIETALTRFNIKFLRLDGSMSQRARAAVLQQFTES 1030

Query: 1041 ASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAM 1099
               + +LM   A  +GL+L+   RVF+M+P W  ++E Q I R HR+G    + V+   +
Sbjct: 1031 NGFVVMLMSLRAGGVGLNLTSAGRVFMMDPWWSFAVELQAIDRVHRLGQQDEVVVKRFIV 1090

Query: 1100 RGTVEEQMLEFLQD 1113
            RGTVEE+ML+ +QD
Sbjct: 1091 RGTVEERMLK-IQD 1103



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 30/260 (11%)

Query: 550 LGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEP--LDS 607
           LG   A E  G  K  Q   LI       +R     +LD L+      RL    P  LD+
Sbjct: 497 LGGILADEM-GLGKTIQMLSLIHTHRSENSRNTGHSSLDGLS---QLQRLGKNSPNVLDA 552

Query: 608 VRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP----------SAHSL 657
                 R TL+V P  L+  W ++ ++    G + + ++   +K           SA  L
Sbjct: 553 -----PRTTLVVAPMSLLSQWYSEAEKASVAGSMKIQLYYGAEKALNLQALCCGSSAPDL 607

Query: 658 AW-DYDVVITTFNRLSAEWGRRK-KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISL 715
               Y VV++ F  ++A+ G R   + +  + + RV+LDE H + +  + T +    IS 
Sbjct: 608 VITSYGVVLSEFTSIAAKNGDRSLHNGIFSLKFFRVILDEAHYIKNRASKTARACYEIS- 666

Query: 716 TASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS 775
            A +RW LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE+       
Sbjct: 667 -ADHRWALTGTPIVN----RLEDLFSLVRFLGVEPWN-NFSFWKTFITVPFESGDFVRAL 720

Query: 776 RLLQLLHRCMISARKTDLQT 795
            ++Q +   +++ R  D++T
Sbjct: 721 DVVQTVLEPLVTRRTKDMKT 740



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 17/98 (17%)

Query: 165 LKLFPHQQAAVEWMLHREWNAEVLR----HPL---YI---------DLATEDG-FYFYVN 207
           + L P+Q+ ++ WM+ +E + +  R    HPL   Y+         DL   +G   FYVN
Sbjct: 420 MTLRPYQKQSLHWMMAKEKDEKSHREPSMHPLWEEYVWPVKDVDDKDLPVVEGQSKFYVN 479

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             SGD++       +   GG+  DE GLGKTI  LSLI
Sbjct: 480 PYSGDLSLDFPVQEQHCLGGILADEMGLGKTIQMLSLI 517


>gi|326489199|dbj|BAK01583.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326497361|dbj|BAK02265.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 838

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE  L  +GIK   +   M+   K +++D F +D  C   LM   +
Sbjct: 687  KGIVFSQFTSFLDLIEFSLQRSGIKCVQLNGKMNMVEKGRAIDTFINDPDCRIFLMSLKA 746

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              + L+L+  + VFLM+P W+ ++E Q   R HR+G  +PI      ++ TVEE++L+ 
Sbjct: 747  GGVALNLTVASHVFLMDPWWNPAVESQAQDRIHRIGQFKPIRSTRFVIKDTVEERILQL 805


>gi|221485471|gb|EEE23752.1| helicase, putative [Toxoplasma gondii GT1]
          Length = 2763

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 21/201 (10%)

Query: 678  RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP-NSQL 736
            R +SP++ +HW R+++DEGH+L  S      +Q+   + A  RW+LTGTPT        L
Sbjct: 1498 RSRSPLLSIHWQRLVVDEGHSL--SRCTAQYVQLCRMIVADKRWVLTGTPTSRQSLRHSL 1555

Query: 737  SHLQPMLKFL---------HEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHR 783
            + L  +L+FL         H              I RP    +E G +    +L  LL+ 
Sbjct: 1556 TGLTALLEFLRHPFALPYRHCAVSATKTTPLKAAICRPL---LERGEASALFQLALLLNT 1612

Query: 784  CMISARKTDLQTIPLCIKEVTF-LNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLL 842
            C++   K   Q +P       + +  + +   TYN+LV  ++RN+    ++   + +SLL
Sbjct: 1613 CLVRHSKEQCQRLPALRGPTIYRIEPSAKERTTYNDLVQLMQRNLFCTYYSR-KNKDSLL 1671

Query: 843  NPKQWKFRSTTIRNLRLSCCV 863
            +P Q    ST++ NLR SC +
Sbjct: 1672 HPSQRAQASTSLWNLRFSCTI 1692



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 16/133 (12%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMH-SSNKIKSLDMFRHDASCLALLMDGS 1051
            K+I+ S   E++ ++   L    +K    Y  M   +N++++L  F+ D   + LL+   
Sbjct: 2553 KIIVASSLWENLFLLGCFLEKHSVKCCHFYEKMQDKTNRVEALKSFQQDTETMVLLLSTQ 2612

Query: 1052 -ASLGLDLSFVTRVFLMEPIWDRSMEEQV--------------ISRAHRMGATRPIHVET 1096
              + GLDLS  + V L +P  D ++E+QV              ISRAHRMGA R +HVE 
Sbjct: 2613 LGAHGLDLSCASHVLLPDPPTDPNVEQQVSRDVYRLLFLHLQVISRAHRMGALRDVHVEI 2672

Query: 1097 LAMRGTVEEQMLE 1109
              ++ TVEE +L+
Sbjct: 2673 FILKDTVEETILQ 2685



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 23/27 (85%)

Query: 226 GGMFCDEPGLGKTITALSLILKTQGTL 252
           GG+FCD+PGLGKT+  LS+++K+ G L
Sbjct: 775 GGLFCDDPGLGKTLAMLSVMVKSMGRL 801


>gi|395535758|ref|XP_003769888.1| PREDICTED: LOW QUALITY PROTEIN: transcription termination factor 2
           [Sarcophilus harrisii]
          Length = 1133

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 29/167 (17%)

Query: 599 LALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLA 658
           L +C   D    + S  TLI+ P+ L+ HWK +I++ V   +L ++++    +     + 
Sbjct: 597 LVVCLSRDDSTSFTSHGTLIICPASLIHHWKKEIEKRVSNNRLRIYLYHGSNREQHAKVL 656

Query: 659 WDYDVVITTFNRLSAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSL 703
             YDVVITT++ L+ E   RK+               SP++Q+ W R++LDE H      
Sbjct: 657 SRYDVVITTYSLLAKEIPTRKEEGDVPATDACVEDCTSPLLQIVWARIILDEAH------ 710

Query: 704 NLTN-KLQMAIS---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           N+ N ++Q +I+   L A  RW +TGTP  N     L  +  +L+FL
Sbjct: 711 NIKNPRVQTSIAVCKLQACARWAVTGTPIQNN----LLDMYSLLRFL 753



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 9/127 (7%)

Query: 995  IIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS-----CLALLMD 1049
            +I SQ+   + ++   L   G+ +A +   ++   ++  ++ F    S      ++LL  
Sbjct: 983  VIVSQWTSMLKIVALHLQRRGLTYAVIDGSVNPKQRMDLVEAFNRSYSKPQVMLISLLAG 1042

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            G   +GL+L     +FL++  W+ ++EEQ   R +R+G    + +       TVEE+ + 
Sbjct: 1043 G---VGLNLIGGNHLFLLDMHWNPALEEQACDRIYRVGQKNDVVIHRFVCEDTVEEK-IS 1098

Query: 1110 FLQDTDR 1116
            +LQ   +
Sbjct: 1099 YLQSRKK 1105


>gi|403171217|ref|XP_003330445.2| hypothetical protein PGTG_11982 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375169081|gb|EFP86026.2| hypothetical protein PGTG_11982 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1425

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 16/148 (10%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S ATL+V P  L+D WK ++++  +   L +FV+    K +  S A  YDVVITT+N ++
Sbjct: 797 SHATLVVCPLTLLDQWKDELERCHK--ALKVFVYHSATKAALGSSADKYDVVITTYNIVA 854

Query: 673 AEWG----RRKKSP----MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLT 724
           +EWG    +   +P    + ++ W R++LDEGH + +    ++K     +L+   RW+L+
Sbjct: 855 SEWGTIESKSGDAPKLNGLYKIDWYRIILDEGHNIKNRNAQSSK--ACYNLSGRRRWVLS 912

Query: 725 GTPTPNTPNSQLSHLQPMLKFLHEEAYG 752
           GTP  N    +L  L  +L F+  E +G
Sbjct: 913 GTPIVN----RLEDLSSLLHFIRLEPWG 936



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 4/150 (2%)

Query: 994  VIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHD-ASCLALLMDGSA 1052
             ++FSQF   + +IEQ L     +F  +   + +  + K+L+ F      C+ +     A
Sbjct: 1273 AVVFSQFTGFLDLIEQVLKRDRFRFVRLDGTLSTRKRKKALETFNDPRKPCILVCSLKVA 1332

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
             +GL+L    RV++M+  W+ ++E Q I R HR G  +P +V    +  ++E++ML   +
Sbjct: 1333 GVGLNLIKANRVYMMDTWWNEAIENQAIDRIHRFGQQKPTYVVRFLVSNSIEDRMLSIQK 1392

Query: 1113 DTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
               + R ++ + L   +   A   +T+ +F
Sbjct: 1393 ---KKRAIINDALGGSKDSKAGQAQTMENF 1419



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 50/122 (40%), Gaps = 16/122 (13%)

Query: 140 IDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLR-----HPL-- 192
           IDLV   AT   +     S     +L L P+QQ  + W++  E   E  R     HPL  
Sbjct: 618 IDLVYQKATAHDMSLDMRSPCDGFQLPLRPYQQQGLSWLMKMEATLEQAREEVSIHPLWE 677

Query: 193 -YIDLATEDGF--------YFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALS 243
            YI    ED           FY N   G+ +       R   GG+  DE GLGKTI   +
Sbjct: 678 EYIFPHDEDQANWAVASDEQFYYNPYMGEFSFEFPRASRKCQGGILADEMGLGKTIQMAA 737

Query: 244 LI 245
           LI
Sbjct: 738 LI 739


>gi|367040485|ref|XP_003650623.1| hypothetical protein THITE_2110273 [Thielavia terrestris NRRL 8126]
 gi|346997884|gb|AEO64287.1| hypothetical protein THITE_2110273 [Thielavia terrestris NRRL 8126]
          Length = 1158

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 88/190 (46%), Gaps = 15/190 (7%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           ++ ATL+V P  L+  W+T+I++ V +  +L + V    ++     +   +DVVITT+  
Sbjct: 357 VTNATLVVAPLALIRQWETEIKEKVAKSHELKVCVHHGPQRTKDPKVLAKHDVVITTYQT 416

Query: 671 LSAEWGRRKKSPM-------MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
           L +E G     P          +HW RV+LDE HT+ +    T   +   +L A  RW L
Sbjct: 417 LVSEHGNSNPDPTNAPQAGCFGIHWFRVILDEAHTIKN--RNTKSTKACCALRAEYRWCL 474

Query: 724 TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
           TGTP  N     L  LQ ++ FL    Y  +   W   I  P ++       R L  L R
Sbjct: 475 TGTPMQNN----LDELQSLVHFLRIPPY-DDLAEWRANIDGPMKSGKGHIAIRRLHTLLR 529

Query: 784 CMISARKTDL 793
           C +  R  D+
Sbjct: 530 CFMKRRTKDI 539



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 3/126 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVA-GIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            K I+FSQF   + +IE  L    G+K       M +  +  +L   R D     LL    
Sbjct: 946  KFIVFSQFTSMLDLIEPFLRAQPGLKAVRYDGKMAADAREAALRALRGDPHTRVLLCSLK 1005

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +  TVE ++LE 
Sbjct: 1006 CGSLGLNLTAATRVVIVEPFWNPFVEEQAIDRVHRLTQTVDVVVYKLTVANTVEARILE- 1064

Query: 1111 LQDTDR 1116
            LQD  R
Sbjct: 1065 LQDKKR 1070


>gi|401881490|gb|EJT45789.1| DNA repair protein RAD5 [Trichosporon asahii var. asahii CBS 2479]
          Length = 1357

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 3/175 (1%)

Query: 957  DLIELQPSYRQWSNTNTFLKQD--LYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVA 1014
            +L++L    +  +N + F   D  +   + E N  +P K I+FSQ+   +  IE  L  +
Sbjct: 1170 ELMKLSRQNKHSANYDPFGTHDDGIVETDDEGN-PIPTKSIVFSQWTTMLDRIEDMLQES 1228

Query: 1015 GIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRS 1074
             I+F  +   M    + ++++  +     + L+   +  +GL+L+  +R FL++P W+ S
Sbjct: 1229 NIRFCRLDGSMTREARAEAMEALKTKGVEVMLVSTRAGGVGLNLTSASRAFLVDPYWNPS 1288

Query: 1075 MEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPE 1129
            +E Q I R HR+G  RP+    L + G+VEE++ +  Q  +   +L  + + + E
Sbjct: 1289 VEAQAIDRIHRLGQKRPVTALKLMINGSVEERLQKIQQKKEHLAKLSLKNMTRKE 1343



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 120/288 (41%), Gaps = 42/288 (14%)

Query: 668  FNRLSAEWGRRK----KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
             N+   + GRR+     SP+  V W RV+LDE H++ SS  +  K      L A  R  L
Sbjct: 795  LNQTKKKGGRRRGTPEPSPLQSVDWFRVVLDEAHSIKSSQTVACK--ACCYLEADRRIAL 852

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTP  N    ++  +  + KFL       +++ ++  I  P +   + G +RL  ++  
Sbjct: 853  TGTPIQN----RIEDVWALFKFLRLSPI-DDKEVFNKFITTPCKTGEQIGIARLQLIMRT 907

Query: 784  CMISARKTDLQT--------IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDP 835
            C +  R  D +T        +P   +   +L+  E+    Y+E +  +++ +      D 
Sbjct: 908  CSLR-RTKDTETEEGKKILSLPPRRELQVWLDLREDERAIYDERLHDIKKEV------DE 960

Query: 836  SHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAG--EDIQETMDVLVENGLDPLSQ 893
               +  L  K +      +  LR +C    H+ +  +G  ED     +++   G+D    
Sbjct: 961  LQAKKELT-KNYAHVLQHLLRLRQTC---DHVDLAGSGVTEDDYNDGEIM---GID---D 1010

Query: 894  EYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEI 941
              A I+ + L  G  L  I    C A D++ C    CG  +    P +
Sbjct: 1011 AVAGIERHGLTQGRALAVI----CAAKDNDNCVCAECGHDFSPYFPSV 1054


>gi|156046805|ref|XP_001589764.1| hypothetical protein SS1G_09486 [Sclerotinia sclerotiorum 1980]
 gi|154693881|gb|EDN93619.1| hypothetical protein SS1G_09486 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 1054

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 78/174 (44%), Gaps = 24/174 (13%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTF 668
           L + TL+V P  L+  W+ +I+  V     H      H  P       D   YDVVITT+
Sbjct: 313 LDKCTLVVAPLALIRQWEAEIKDKVESS--HSLRVCVHHGPQRTKRFQDLRKYDVVITTY 370

Query: 669 NRLSAEWGRRKKSP--------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
             L +EWG   K             +HW RV+LDE HT+ +        Q   SL +  R
Sbjct: 371 QILVSEWGNSSKDDDDEGVKVGCFGIHWYRVILDEAHTIKN--RNAKATQACYSLRSHYR 428

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGR 774
           W LTGTP  N     L  LQ ++KFL  + Y  N + W   I RP    M+ GR
Sbjct: 429 WCLTGTPMQNN----LDELQSLIKFLRIKPY-DNLREWKDQIDRP----MKNGR 473



 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + ++E  L   G K+      M +  +  SLD  R+D +C  LL     
Sbjct: 834  KFIVFSQFTSMLDLVEPFLRQKGFKYTRYDGGMKNDLREASLDRLRNDENCRVLLCSLKC 893

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+     + V  + ++ TVEE++L  L
Sbjct: 894  GSLGLNLTAATRVVILEPFWNPFVEEQAIDRVHRLTQKIDVVVYKITIKDTVEERIL-LL 952

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 953  QEKKR 957


>gi|380096309|emb|CCC06357.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1054

 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 17/219 (7%)

Query: 585 KTLDNLAFDLAALRLALCEPLDSVRLYLSRA--TLIVVPSYLVDHWKTQIQQHVRPGQLH 642
           KTL  +A   + L   +C  L   +  + RA  TL+VVP  L+  W+ Q+ +HV PG   
Sbjct: 459 KTLTMIALTASDL---MCASLIPRQTVMPRAGQTLVVVPPPLLGTWEEQLAEHVVPGAFS 515

Query: 643 LFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW---GRRKKSPMMQVHWLRVMLDEGHTL 699
            +    + + +A +      +V+TT++ +SAEW   G    S +    W R++LDE H +
Sbjct: 516 WYRHHGNDRLTASNDRHQPTIVLTTYHTVSAEWKKAGENATSCIFSRRWRRIILDEAHFI 575

Query: 700 GSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAW 758
               N  +++  AI +L   +RW +TGTP  N    +LS +  +LKFL    Y + +  +
Sbjct: 576 ---RNRNSQMAHAICALDGESRWAVTGTPIQN----KLSDIATLLKFLRIYPYSE-KTCF 627

Query: 759 DGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIP 797
           D  I   ++ E  E   +  + L  C+I  R      +P
Sbjct: 628 DADITHLWKTEQAEEALKRFKRLASCLILRRPATTIQLP 666



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 7/121 (5%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGI---KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            K ++FS +   + VIE  L   GI   +F G        N +   + FR D SC  LL+ 
Sbjct: 884  KSVVFSTWRTTLDVIEAGLKTEGIPCLRFDGKVPQRERQNVV---NRFRQDPSCRVLLLT 940

Query: 1050 GS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             S  ++GL L+  +  FLMEP W+ ++EEQ ++R HRMG TR +      +R + EE+++
Sbjct: 941  LSCGAVGLTLTVASYAFLMEPHWNPTLEEQALARIHRMGQTREVTTVRFYVRDSFEERVM 1000

Query: 1109 E 1109
            E
Sbjct: 1001 E 1001


>gi|452847699|gb|EME49631.1| hypothetical protein DOTSEDRAFT_68421 [Dothistroma septosporum NZE10]
          Length = 1103

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 9/143 (6%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE  L  + ++F      M    + +SL+  R+D+    LL     
Sbjct: 885  KTIVFSQFTTMLDLIEPHLKASNLRFVRYDGSMRPDAREQSLNSLRNDSKTRVLLCSLKC 944

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L +R +VEE+++E  
Sbjct: 945  GSLGLNLTAASRVVIVEPFWNPFVEEQAIDRVHRLNQTVDVKVFRLTIRNSVEERIVELQ 1004

Query: 1112 QDTDRCRRLLKEELVKPEREGAR 1134
            +         K EL +   EG +
Sbjct: 1005 E--------RKRELARAAIEGGK 1019



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 29/197 (14%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + ++TL+V P  L+  W+++I+  V +   L + V     +         YDVVITT+  
Sbjct: 380 VGKSTLVVAPLALIKQWESEIKTKVSKSHALKVLVHHGASRTKCGEQLKKYDVVITTYQT 439

Query: 671 LSAEWGRRKKSPMM----------QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
           L++E      S M+           VHW RVMLDE H++ +        Q   +L +  R
Sbjct: 440 LTSEHA---GSNMLVSGGARVGCFGVHWYRVMLDEAHSIKN--RNAKATQACYALHSWYR 494

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----R 776
           W LTGTP  N     L  LQ ++KFL  + Y + Q +W   I +P    M+ GR     R
Sbjct: 495 WCLTGTPMQNN----LDELQSLIKFLRIKPYCE-QPSWKEQITQP----MKNGRGGLAMR 545

Query: 777 LLQLLHRCMISARKTDL 793
            LQ   R  +  R  D+
Sbjct: 546 RLQYFLRACMKRRTKDI 562


>gi|452989438|gb|EME89193.1| hypothetical protein MYCFIDRAFT_55645 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 850

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE  L  A I+F      M    + +SL+  R+D     LL     
Sbjct: 655  KTIVFSQFTTMLDLIEPHLRHADIRFVRYDGSMRPDAREQSLNSLRNDKKTRVLLCSLKC 714

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + V  L +R TVEE++L+ L
Sbjct: 715  GSLGLNLTAASRVVIVEPFWNPFVEEQAIDRVHRLNQTVDVKVFRLTIRETVEERILD-L 773

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 774  QEKKR 778



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 112/249 (44%), Gaps = 41/249 (16%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TL+V P  L+  W+++I+  V     L + V     +    +    YDVVITTF  
Sbjct: 149 VGKGTLVVAPLALIKQWESEIKSKVNKSHALKVLVHHGANRTKNSADLKKYDVVITTFQT 208

Query: 671 LSAE---------WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNR 720
           L++E         +G R       VHW R+MLDE H++    N   K  +A  +L +  R
Sbjct: 209 LTSEHAGSNMNSEYGTR--VGCFGVHWYRLMLDEAHSIK---NRNAKSSLACCALNSWYR 263

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL--- 777
           W LTGTP  N     L  LQ ++KFL  + Y +  + W   I++P    M+ GR  L   
Sbjct: 264 WCLTGTPMQNN----LDELQSLIKFLRIKPYCELPR-WKEQIIKP----MKSGRGGLAMN 314

Query: 778 -LQLLHRCMISARKTDLQTIPLCIKEVTFLNF-----TEEHAGTYNELVVTVRRNILMAD 831
            LQ+  +  +  R  D+      +K+   LNF     T E     N  +  V+R ++  +
Sbjct: 315 RLQVFLKAFMKRRTKDI------LKKDGALNFGGKSATTEDGEAKNGSMQIVKREVMTVE 368

Query: 832 WN-DPSHVE 839
              DP   E
Sbjct: 369 CQFDPVEKE 377


>gi|443899789|dbj|GAC77118.1| helicase-like transcription factor HLTF [Pseudozyma antarctica T-34]
          Length = 957

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 9/144 (6%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K I+FSQF   + ++E  L+  G  +      M    +  +L+  R DA+   +L+   
Sbjct: 802  EKTIVFSQFTSFLDLVEPHLSQRGFGYVRYDGSMRPPEREAALERIRSDAATTVILISFK 861

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S GL+L+  +RV LM+  W+  +EEQ   RAHR+G  R + +  L+++ TVEE++L  
Sbjct: 862  AGSTGLNLTACSRVILMDLWWNPQIEEQAFDRAHRLGQVRDVTIYKLSIKDTVEERILR- 920

Query: 1111 LQDTDRCRRLLKEELVKPEREGAR 1134
            LQD  R        L K   EG++
Sbjct: 921  LQDKKRA-------LAKAALEGSK 937


>gi|347756258|ref|YP_004863821.1| superfamily II DNA/RNA helicase [Candidatus Chloracidobacterium
            thermophilum B]
 gi|347588775|gb|AEP13304.1| Superfamily II DNA/RNA helicase, SNF2 family [Candidatus
            Chloracidobacterium thermophilum B]
          Length = 1118

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 3/119 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASC-LALLMDGS 1051
            KV++FSQF   + +I ++L   GI +   Y    + N+ + ++ F+ D +C L L+   +
Sbjct: 970  KVLVFSQFTSLLALIRKRLDADGITYE--YLDGRTRNRQERVERFQQDPNCQLFLISLRA 1027

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
               GL+L+    VFL++P W+ ++E Q I RAHR+G  RP+    L +R TVEE++LE 
Sbjct: 1028 GGQGLNLTAAEYVFLLDPWWNPAVEAQAIDRAHRIGQVRPVFAYRLIVRDTVEEKVLEL 1086



 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 24/218 (11%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW 675
           +L+V P  LV +W+ +  +     ++ +   T   +  +     DYD+++TT+  L    
Sbjct: 712 SLVVAPRSLVFNWRQEAGKFT--PRMRVLEHTGVGRARSIEQFADYDLILTTYGTL---- 765

Query: 676 GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQ 735
            RR    +    +  V+LDE   + ++ + + K   A  L   +R  L+GTP  N     
Sbjct: 766 -RRDILLLKDFAFDYVILDEAQAIKNARSESAK--AARLLNCRHRLALSGTPVEN----H 818

Query: 736 LSHLQPMLKFLHEEAYGQN---QKAWDGGILRPFEAEMEEGRSRLLQ--LLHRCMISARK 790
           L  L  + +FL+    G     Q    GG  R  +AE++   +R L+  +L R     ++
Sbjct: 819 LGELWSLFEFLNPGMLGAASVFQLTASGG--RTVDAELQPLLARALRPFILRRT----KE 872

Query: 791 TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL 828
              + +P   ++  +     E    YNEL    RR +L
Sbjct: 873 QVARDLPPKTEQTIYCEMEPEQRQAYNELRDHYRRTLL 910


>gi|322706535|gb|EFY98115.1| helicase, putative [Metarhizium anisopliae ARSEF 23]
          Length = 652

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 28/250 (11%)

Query: 613 SRATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           S+ATLIV PS  L+D+W  +I++++ PG+ H      HK+           +V TT+  L
Sbjct: 279 SKATLIVAPSSLLIDNWIHEIRRYLGPGR-HTETDFLHKRA----------IVFTTYATL 327

Query: 672 SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
           + ++   K + +  ++W R++LDE H + +    T + Q   SL++ + W LTGTP  N 
Sbjct: 328 ATDFCSGKNA-LADINWFRIVLDEAHNIRN--RSTKQFQAVASLSSHHHWCLTGTPIQN- 383

Query: 732 PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              +L  L  ++ F+      +N  ++   I+ P        R   L++L R +   R  
Sbjct: 384 ---KLDDLGALVSFVQVPIL-KNPASFQKFIINPI-VSGSGTRYENLRVLLRSICIRRTR 438

Query: 792 DLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS 851
           +L  +P  + E+  + FT      YN++++  R ++ M        V   L     KF  
Sbjct: 439 ELLNLPDPVSEIRRVKFTAAEYSEYNKILLQCRTDLDMM-------VSGRLKGASNKFLL 491

Query: 852 TTIRNLRLSC 861
            T+  LRL C
Sbjct: 492 DTLMKLRLYC 501


>gi|427400134|ref|ZP_18891372.1| hypothetical protein HMPREF9710_00968 [Massilia timonae CCUG 45783]
 gi|425720874|gb|EKU83789.1| hypothetical protein HMPREF9710_00968 [Massilia timonae CCUG 45783]
          Length = 1379

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 4/142 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            KV++FSQF++H+ +I Q L   G+ +  +        + + +D F+     L L+   + 
Sbjct: 1226 KVLVFSQFVDHLTLIRQYLDAQGVAYQYLDGSTPIQERKRRVDAFQAGEGDLFLISLKAG 1285

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
             +G++L+    V  M+P W+ ++E+Q   RAHRMG  RP+ +  L  RGT+EE ++    
Sbjct: 1286 GVGINLTAADYVIHMDPWWNPAVEDQASDRAHRMGQQRPVTIYRLVARGTIEEGIV---- 1341

Query: 1113 DTDRCRRLLKEELVKPEREGAR 1134
            D  R +R L + L++     AR
Sbjct: 1342 DLHRHKRDLADSLLEGTEMAAR 1363


>gi|407921150|gb|EKG14313.1| SNF2-related protein [Macrophomina phaseolina MS6]
          Length = 1089

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 9/205 (4%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S+ATL++ P   V +W+ Q + H++   +  +++    +         YD+VI+T++ ++
Sbjct: 502 SKATLLICPVSTVANWQEQFKLHIKDKAMSYYIYHGQSRTDDVKELSSYDLVISTYSVVA 561

Query: 673 AEWGR-RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
           AE    R K P+  ++W R++LDE H + S+   T +     +L A  RW +TGTP  N 
Sbjct: 562 AEHDNPRSKKPLALINWFRIVLDEAHMIRST--ATKQSIATCALLAQRRWAVTGTPVQN- 618

Query: 732 PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
              +L  L  ++KFL  + +  ++  +   IL PF+    E   + L++L   +   R  
Sbjct: 619 ---RLDDLGALIKFLRIKPF-DDKGGFTQYILTPFKNADPEILPK-LRILVDSITLRRLK 673

Query: 792 DLQTIPLCIKEVTFLNFTEEHAGTY 816
           D   +P     +  LNF+ E    Y
Sbjct: 674 DRIDLPPRHDRLVRLNFSPEERKLY 698



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 9/154 (5%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FS +  ++ +I   L   G+ +  +   M    +  +LD FR D S   +L+  
Sbjct: 933  PVKSVVFSGWTSYLDLISIALEDKGLNYTRLDGTMSRRKRTFALDAFRDDPSIQIMLISI 992

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  LGL+L+  +  ++MEP ++ + E Q + R HR+G  R + +    M  + EE+MLE
Sbjct: 993  NAGGLGLNLTTASMAYVMEPQYNPAAEAQAVDRVHRLGQNREVTITRFIMNESFEERMLE 1052

Query: 1110 F------LQD--TDRCRRLLKEELVKPEREGARS 1135
                   L D   +R  RL KEE  K   E  +S
Sbjct: 1053 LQAKKKDLADLSMNRNARLDKEEAAKKRLEALKS 1086


>gi|398399000|ref|XP_003852957.1| SNF2 family DNA-dependent ATPase domain-containing protein
           [Zymoseptoria tritici IPO323]
 gi|339472839|gb|EGP87933.1| SNF2 family DNA-dependent ATPase domain-containing protein
           [Zymoseptoria tritici IPO323]
          Length = 916

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 39/249 (15%)

Query: 599 LALCEPLDSVRLYLSRA-------TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK 651
           + L + L+ + L ++ A       TL+V P  ++ +W TQI  HV+     +  +T H  
Sbjct: 350 MGLGKTLEMISLIVADAEKFGRGTTLVVAPLSVMSNWTTQIDAHVKQSS-KMSCYTYHGT 408

Query: 652 PSAHSLAWD----YDVVITTFNRLSAEW---GRRKKSP--------MMQVHWLRVMLDEG 696
               S+A +    YDVV+TT+  L++++   G+  K P        +  + W RV+LDEG
Sbjct: 409 GRVDSMAAEDFANYDVVLTTYQTLASDFMPRGKGSKQPENKLREKGLYSMEWRRVILDEG 468

Query: 697 HTLGSSLNLTNKLQMAIS-LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQ 755
           H +    N   K   A++ LT+ +RW+LTGTP  N+    L  L  +L+F+     G NQ
Sbjct: 469 HIV---RNPQTKGAGAVNNLTSRSRWVLTGTPIVNS----LRDLFSLLRFVGITG-GLNQ 520

Query: 756 -KAWDGGILRPFE--AEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKE----VTFLNF 808
              ++  ++RP        E  S LLQ + R     R+ D+  I L + +    V  L+F
Sbjct: 521 LDVFNAVLVRPLSNGGAKSEDASILLQAVMRAFTLRRRKDMAFIDLRLPKLEEFVHRLDF 580

Query: 809 TEEHAGTYN 817
           TE+    Y+
Sbjct: 581 TEKEQTRYD 589



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            DK I+FSQ+   + ++  +L   G+K+  +   M+ + + ++++    D     +L   +
Sbjct: 762  DKTIVFSQWTSFLDIVSARLDKDGVKYCRLDGTMNVAKRDEAIEALNSDPKTTVMLASLA 821

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S+GL+L+  + V L +  W  ++E+Q + R HR+G  +   V  L M G++EE+ +  
Sbjct: 822  ACSVGLNLTAASNVILSDTWWAPAIEDQAVDRVHRLGQKKETKVFRLVMEGSIEEETIRI 881

Query: 1111 LQD 1113
              D
Sbjct: 882  QTD 884


>gi|406696613|gb|EKC99895.1| DNA repair protein RAD5 [Trichosporon asahii var. asahii CBS 8904]
          Length = 1356

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 3/175 (1%)

Query: 957  DLIELQPSYRQWSNTNTFLKQD--LYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVA 1014
            +L++L    +  +N + F   D  +   + E N  +P K I+FSQ+   +  IE  L  +
Sbjct: 1169 ELMKLSRQNKHSANYDPFGTHDDGIVETDDEGN-PIPTKSIVFSQWTTMLDRIEDMLQES 1227

Query: 1015 GIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRS 1074
             I+F  +   M    + ++++  +     + L+   +  +GL+L+  +R FL++P W+ S
Sbjct: 1228 NIRFCRLDGSMTREARAEAMEALKTKGVEVMLVSTRAGGVGLNLTSASRAFLVDPYWNPS 1287

Query: 1075 MEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPE 1129
            +E Q I R HR+G  RP+    L + G+VEE++ +  Q  +   +L  + + + E
Sbjct: 1288 VEAQAIDRIHRLGQKRPVTALKLMINGSVEERLHKIQQKKEHLAKLSLKNMTRKE 1342



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 120/288 (41%), Gaps = 42/288 (14%)

Query: 668  FNRLSAEWGRRK----KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
             N+   + GRR+     SP+  V W RV+LDE H++ SS  +  K      L A  R  L
Sbjct: 794  LNQTKKKGGRRRGTPEPSPLQSVDWFRVVLDEAHSIKSSQTVACK--ACCYLEADRRIAL 851

Query: 724  TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            TGTP  N    ++  +  + KFL       +++ ++  I  P +   + G +RL  ++  
Sbjct: 852  TGTPIQN----RIEDVWALFKFLRLSPI-DDKEVFNKFITTPCKTGEQIGIARLQLIMRT 906

Query: 784  CMISARKTDLQT--------IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDP 835
            C +  R  D +T        +P   +   +L+  E+    Y+E +  +++ +      D 
Sbjct: 907  CSLR-RTKDTETEEGKKILSLPPRRELQVWLDLREDERAIYDERLHDIKKEV------DE 959

Query: 836  SHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAG--EDIQETMDVLVENGLDPLSQ 893
               +  L  K +      +  LR +C    H+ +  +G  ED     +++   G+D    
Sbjct: 960  LQAKKELT-KNYAHVLQHLLRLRQTC---DHVDLAGSGVTEDDYNDGEIM---GID---D 1009

Query: 894  EYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFLYEMQSPEI 941
              A I+ + L  G  L  I    C A D++ C    CG  +    P +
Sbjct: 1010 AVAGIERHGLTQGRALAVI----CAAKDNDNCVCAECGHDFSPYFPSV 1053


>gi|157871832|ref|XP_001684465.1| DNA repair protein-like protein [Leishmania major strain Friedlin]
 gi|68127534|emb|CAJ05555.1| DNA repair protein-like protein [Leishmania major strain Friedlin]
          Length = 922

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 16/175 (9%)

Query: 943  TRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALP--DKVIIFSQF 1000
            T    P P+ P+  DL ++     Q S+   +L        +++ ++LP  DKV++FS F
Sbjct: 695  TSAAEPAPEVPLHLDLSDMSNWSLQLSSKTQYL--------IDTIRSLPAEDKVVVFSSF 746

Query: 1001 LEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLA-----LLMDGSASLG 1055
            L ++   +  L  AG+  A     M    K   L++F HDA+  A     L    S  +G
Sbjct: 747  LTYLRCAQHWLQAAGVSCALYSGSMTMKQKQSLLELF-HDAARPASPRVLLATISSCGVG 805

Query: 1056 LDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            L+L+     FLMEP W+   EEQ ++R +R+G T+P+    L   GT+E+ + + 
Sbjct: 806  LNLTCANHCFLMEPSWNPGTEEQALNRIYRIGQTKPVTFTKLIADGTIEQNISQL 860



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 15/89 (16%)

Query: 658 AWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTA 717
           A DYDV      RL  E  +     +  + W R++LDE H + +    T++ +  + L+ 
Sbjct: 327 ADDYDVD----RRLQTEVDK-----LFMIRWGRIILDEAHYIRNMR--THQSRACLKLSG 375

Query: 718 SNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
             RW++T TP  N+    L+ L P+L+FL
Sbjct: 376 VCRWVVTATPVQNS----LNDLYPLLRFL 400


>gi|67523009|ref|XP_659565.1| hypothetical protein AN1961.2 [Aspergillus nidulans FGSC A4]
 gi|40745970|gb|EAA65126.1| hypothetical protein AN1961.2 [Aspergillus nidulans FGSC A4]
 gi|259487320|tpe|CBF85901.1| TPA: SNF2 family helicase, putative (AFU_orthologue; AFUA_4G10830)
            [Aspergillus nidulans FGSC A4]
          Length = 1502

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 75/126 (59%), Gaps = 3/126 (2%)

Query: 985  ESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCL 1044
            E +KA  +K+IIF       + I + L + G+ F    + +  + + + L +FR      
Sbjct: 875  EHSKA--EKIIIFYDNNNSAYWIAEGLELLGVDFRIYANTLKPTLREEYLILFREFEQVR 932

Query: 1045 ALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTV 1103
             LLMD   AS GL ++  +RV+++ PIW  ++E Q I RAHR+G TRP+ VETL +R T+
Sbjct: 933  VLLMDLRQASHGLHIAQASRVYIVNPIWQPNIESQAIKRAHRIGQTRPVFVETLVLRDTL 992

Query: 1104 EEQMLE 1109
            E+++L+
Sbjct: 993  EDKILQ 998



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 12/130 (9%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRP-GQLHLFVWTDHKKPSAHSLAWDYDVVITT 667
           R++L   TLIVVP  LVDHW ++I  H      L L    D   P     A  YD+V+ +
Sbjct: 379 RIHLHSGTLIVVPPNLVDHWMSEIAMHTEGLKTLTLRSSADLTPPPEDLFA--YDIVLFS 436

Query: 668 FNRLSAEWG---------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
             R   E           R++ SP+ ++HWLRV++DEGH +    + TN   +   +   
Sbjct: 437 RTRFEKEADDFNGGGRDRRKEPSPLTKLHWLRVIVDEGHNVAGHGHKTNMSHLLDQIHVE 496

Query: 719 NRWLLTGTPT 728
            RW+++GTP+
Sbjct: 497 RRWVVSGTPS 506



 Score = 40.4 bits (93), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 1/94 (1%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           +K  L+P+Q+ +   M+ RE     +  P     ++  G  +Y +   G IA        
Sbjct: 208 LKTPLYPYQRRSAATMIQREVQPHQMLDPRLQSCSSPTGQKYYYDKEKGKIARERT-MYS 266

Query: 223 DFHGGMFCDEPGLGKTITALSLILKTQGTLADPP 256
           +  GG+  +  G GKT+  L++IL T+G     P
Sbjct: 267 EACGGILAETMGCGKTLICLAVILATRGHFPQIP 300


>gi|358057779|dbj|GAA96374.1| hypothetical protein E5Q_03040 [Mixia osmundae IAM 14324]
          Length = 1353

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 5/134 (3%)

Query: 976  KQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLD 1035
            ++D +RP+  S + +  K ++FSQ+   +   E  L   GIKF  +   M+   + +S++
Sbjct: 1188 EEDDFRPH--SGQVV--KSVVFSQWTALLDRTEDALKECGIKFRRLDGSMNRDQRSRSME 1243

Query: 1036 MFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
             FR +  C  LL+   A  +GL+L+   RV+L+EP W+ ++E Q + R +R+G TRP+ +
Sbjct: 1244 AFRLEPDCEVLLVSLRAGGVGLNLTAAQRVYLLEPFWNPAVENQAVDRIYRLGQTRPVKI 1303

Query: 1095 ETLAMRGTVEEQML 1108
                ++ ++E  ML
Sbjct: 1304 SRFIIKDSIEANML 1317



 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 58/176 (32%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQ-------------LHLFVW-TDHKKPSAHSLA 658
           SRATLIV P   V +W++QI +H +                L ++++  +++   AH LA
Sbjct: 679 SRATLIVCPLSTVQNWESQIAEHTKRSSAEFGKAKSAKAKGLSVYIYHGNNRTQYAHDLA 738

Query: 659 WDYDVVITTFNRLSAEWGRR---------------------------------------- 678
            D+D+VITT++ L+ E+ R+                                        
Sbjct: 739 -DHDIVITTYSILATEYSRQGLPEDDTSSSSDDSVEIIESMAVEAKKEKAKARKRKRKAE 797

Query: 679 -KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
            K S + QV W R++LDE H +    + T + +    L AS R  LTGTP  NT N
Sbjct: 798 GKPSVLQQVEWYRIVLDEAHMIKE--HSTIQARACCDLAASRRACLTGTPLQNTLN 851


>gi|336465939|gb|EGO54104.1| hypothetical protein NEUTE1DRAFT_87171 [Neurospora tetrasperma FGSC
           2508]
 gi|350287226|gb|EGZ68473.1| hypothetical protein NEUTE2DRAFT_118380 [Neurospora tetrasperma
           FGSC 2509]
          Length = 1039

 Score = 80.9 bits (198), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 25/197 (12%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH--KKPSAHSLAWDYDVVITTFN 669
           +S+ATL+V P  L+  W+ +++  V P  L++ V   H  K+ +  +    YDVVITT+ 
Sbjct: 240 ISKATLVVAPLALIRQWEAELKDRVMP-DLNIKVCVHHGPKRSTVPAELAKYDVVITTYQ 298

Query: 670 RLSAEWGRRKKSPM-------MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            L +E  +    P          VHW RV+LDE H++ +    T   +   +L +  RW 
Sbjct: 299 ILVSEHDKSHPDPNKGAQAGCFGVHWFRVILDEAHSIKN--RNTKAAKACCALRSEYRWC 356

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL-LQLL 781
           LTGTP  N     L  LQ ++ FL    Y  N   W   I  P    M++G+  + +Q L
Sbjct: 357 LTGTPMQNN----LDELQSLIHFLRIAPY-DNLAEWRAQIDTP----MKQGKGHIAIQRL 407

Query: 782 H---RCMISARKTDLQT 795
           H   RC +  R  ++ T
Sbjct: 408 HSILRCFMKRRTKEVLT 424



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLT--VAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            K I+FSQF   + ++E  L   +  IK       M +  +  SL   R D     LL   
Sbjct: 817  KFIVFSQFTSMLDLVEPFLRHHLPDIKHVRYDGKMPNDAREASLHSLRKDPRTRILLCSL 876

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
               SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +RGTVE ++LE
Sbjct: 877  KCGSLGLNLTAATRVIIVEPFWNPFVEEQAIDRVHRLTQTVDVVVYKLTVRGTVEARILE 936

Query: 1110 FLQDTDRCRRLLKEELVKPERE 1131
              +     +RLL +  V+   E
Sbjct: 937  LQEK----KRLLAQTAVEGSTE 954


>gi|298715262|emb|CBJ27911.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1021

 Score = 80.9 bits (198), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 32/237 (13%)

Query: 604 PLD-SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD 662
           P+D SV+L     TL+V P  ++ +W+TQ  +HV+ G L ++ +    +    +     D
Sbjct: 415 PVDPSVKL----GTLVVCPMSVIHNWETQFAEHVKEGALDVYAYHGGNRNQDPTFLATKD 470

Query: 663 VVITTFNRLSAEWGR-------------------RKKSPMMQVHWLRVMLDEGHTLGSSL 703
           VVITT++ L++++                     +++  +  +   RV+LDE H   +  
Sbjct: 471 VVITTYDTLASDFSASGGQKALEEDVTAAVGGKPKRRHGVGGLGGNRVVLDEAHPFRN-- 528

Query: 704 NLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGIL 763
           N TNK +  ++L++  RW LTGTP  N P      +  +  FLH  A   N + +   I 
Sbjct: 529 NKTNKHKACLALSSRYRWCLTGTPLINKPED----IGALFSFLH-LAPASNPRVFLQAIG 583

Query: 764 RPFEAEMEEGRSRLLQLLHRCMISARKTDLQ-TIPLCIKEVTFLNFTEEHAGTYNEL 819
           RP  +  + G +RL  L+    +   K+ L   +P  + E+  +   + H   YN L
Sbjct: 584 RPIRSGSDAGLARLRVLMKSVCLRRTKSVLSGKLPPKVVEIHRVQMDDGHREAYNTL 640



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 3/122 (2%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            DK ++FSQF   + VI+  L   G + A +   M +  +   L  F       A +M  S
Sbjct: 858  DKAVVFSQFTSFLDVIQPFLLADGFRLARLDGSMTNKQRQAELKRFAGKGGDGAEVMLAS 917

Query: 1052 ---ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
               A  G++L+     F+ +P W+ S+E Q + R HR+G T+P+ V  +    +VE+++L
Sbjct: 918  LMAAGTGINLTSANHCFIADPWWNASVESQAMDRVHRIGQTKPVRVVRMVSADSVEDRIL 977

Query: 1109 EF 1110
            E 
Sbjct: 978  EI 979


>gi|440492804|gb|ELQ75342.1| Nucleotide excision repair protein RAD16, partial [Trachipleistophora
            hominis]
          Length = 790

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 79/134 (58%), Gaps = 4/134 (2%)

Query: 979  LYRPNLESN-KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF 1037
            LY+  ++SN +   +K IIFSQF+  + ++  +L  AG +   +Y  M  S +  S++ F
Sbjct: 627  LYK--IQSNARTSSNKSIIFSQFVNFLEMLSWRLERAGFRCVKIYGSMPRSQRKASIESF 684

Query: 1038 RHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVET 1096
            ++D++    L+   A  L L+L+    VFLM+P W+ ++EEQ + R HR+G  RPI +  
Sbjct: 685  QNDSNIKIFLISLKAGGLALNLTEANNVFLMDPWWNPAVEEQAMDRIHRIGQFRPIKIYK 744

Query: 1097 LAMRGTVEEQMLEF 1110
            + +  ++E +++E 
Sbjct: 745  IIIEDSIESKIIEL 758



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 48/176 (27%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           +    L++ P   ++ WK +I +H     +   V  D++K     +    +V+++++ ++
Sbjct: 152 MGETNLVIAPVVALNQWKDEIMKHTVGINV---VSQDNQKLRNDQI----NVILSSYGKI 204

Query: 672 SAEWGRRKKS---------------------------------PMMQVHWLRVMLDEGHT 698
            + + R KKS                                  + ++H+ RV+LDE H 
Sbjct: 205 ESIYRRNKKSTALGNPEKEENENSSCHQHVEKNEYHDDMFLFSKIYELHFQRVILDEAHA 264

Query: 699 LGSSLNLTNKLQMAIS-LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQ 753
           +  S + TN    AIS L  + RW +TGTP  N    ++S L  ++KFL  E  GQ
Sbjct: 265 IKDSRSSTN---AAISRLKCNKRWGVTGTPVQN----RVSDLYSLIKFLKIEPLGQ 313


>gi|342883855|gb|EGU84277.1| hypothetical protein FOXB_05234 [Fusarium oxysporum Fo5176]
          Length = 1039

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K ++FS +  H+ +IE  L    I F  +   M  + +  ++D FR D+S   +L+  
Sbjct: 882  PYKSVVFSGWTSHLDLIELALNANEIVFTRLDGSMSRTQRTTAMDRFREDSSVHVILVSI 941

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  LGL+L+    V++MEP ++ + E Q I R HR+G  RP+      MR + EE+MLE
Sbjct: 942  MAGGLGLNLTAGNSVYVMEPQYNPAAEAQAIDRVHRLGQKRPVRTVRYIMRDSFEEKMLE 1001

Query: 1110 F 1110
             
Sbjct: 1002 L 1002



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 7/123 (5%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           ++ TL+V P   V +W+ QI+QH+RPG L   ++    +    +   ++D+VITT+  +S
Sbjct: 454 AKTTLLVCPLSTVTNWEEQIKQHIRPGALDYHIYHGPNRIKDPARLANFDLVITTYGSVS 513

Query: 673 AEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
            E   R+K      P+ Q+ W R++LDE H +     L  + +    L A  RW +TGTP
Sbjct: 514 NELSSRRKKKDGQYPLEQIGWFRIVLDEAHMIREHSTL--QFKAICRLQADRRWAVTGTP 571

Query: 728 TPN 730
             N
Sbjct: 572 VQN 574


>gi|19115158|ref|NP_594246.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe
            972h-]
 gi|74675924|sp|O13762.1|YF2C_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C17A2.12
 gi|2414584|emb|CAB16565.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe]
          Length = 897

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 78/135 (57%), Gaps = 4/135 (2%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K++++SQF +++ ++   L +  I+       M ++ + KSL  F +D   L +L+   
Sbjct: 742  EKILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNNDKDVLVMLVSLK 801

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S+GL+L+    V L EP ++ S+E+Q I R HR+G  +P+ V     + T+EE+++  
Sbjct: 802  AGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQKPVTVYRFITKDTIEERIVSV 861

Query: 1111 LQDTDRCRRLLKEEL 1125
             +   + R+L+KE L
Sbjct: 862  QR---KKRQLVKEAL 873



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 151/344 (43%), Gaps = 63/344 (18%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH----KKPSAHSLAWDYDVVITT 667
           L +  LIVV   L+  W  ++   V P +  L V+  H    K   ++ L+  YDVV+TT
Sbjct: 299 LRKTNLIVVSVALLHQWAEELSTKVHPSK-KLSVYIHHGSTKKNLDSYELS-QYDVVLTT 356

Query: 668 FNRLSAEWGRR----KKSP----------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI 713
           ++ L+ E  +       +P          +++  W R++LDE HT+ +   L  K    +
Sbjct: 357 YSMLAYEMKQNDAFNNNNPATATPPPACSLLETSWYRIVLDEAHTIRNRDTLAAKC--CV 414

Query: 714 SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWD---GGILRP---FE 767
            L A  RW L+GTP  N     +     +LKFL  + Y      W      I RP   + 
Sbjct: 415 KLDAKYRWCLSGTPIQN----HIDEFYSLLKFLRIKPYC----VWSLFAKDISRPLKSYR 466

Query: 768 AEMEEGRSRLLQLLHRCMISAR--KTDLQTIPLC------IKEVTFLNFTEEHAGTYNEL 819
           A++ E   + L++L    +  R  +T +  +P+       I+ V+ +N   E    YNE 
Sbjct: 467 ADIVEAALKRLRILLASTVFRRTKETRVNNLPIVNLPPKTIRTVS-VNLLPEERALYNEQ 525

Query: 820 VVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVT--DAGEDIQ 877
           + + +   L+ ++ +  H  S     ++ F   ++  LR  CC    +K +  D    I+
Sbjct: 526 MSSAQS--LVDNYFNNDHDLS-----RYGFLLVSLLRLRQFCCHPWLVKSSSLDNSFRIR 578

Query: 878 ETMDVLVE-NGLDPLSQEYAFIKYNLLNGGNCLRHILCLD-CVA 919
           ++ +V      LDPL+ E    +   L   NC    +CLD C+A
Sbjct: 579 DSENVRNACKSLDPLTIE----RIATLQDFNC---SVCLDPCLA 615


>gi|328857391|gb|EGG06508.1| hypothetical protein MELLADRAFT_36161 [Melampsora larici-populina
            98AG31]
          Length = 824

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 13/211 (6%)

Query: 907  NCLRHILCLDCVAMDSEKCS-----LPGCGFLYEMQ-SPEILTRPENPNPKWPVPQDLIE 960
            +C +HI C +C+    E  S      P C     +  S E +    +   +  V   L  
Sbjct: 587  SCCKHIFCRECIRQYLETASEVEPECPVCHLPISIDLSQEAIDEESSSKARQGV---LAR 643

Query: 961  LQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAG 1020
            L P   + S     L ++L + N E +     K ++FSQF   + +IE++L +AG K A 
Sbjct: 644  LDPGKWRTSTKIEALVEELSKLNKEDHSI---KSLVFSQFTVFLDLIERRLQLAGFKLAR 700

Query: 1021 MYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQV 1079
            +   M    + +++  F ++      L+   +  + L+L+  +RVF+M+P W+ ++E Q 
Sbjct: 701  LQGHMTPEARDRTIKHFMNNNDVQVFLVSLKAGGVALNLTEASRVFIMDPWWNPAVELQA 760

Query: 1080 ISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + R HR+G  RP+ V  L +  ++E +++E 
Sbjct: 761  MDRIHRLGQHRPVVVTRLIIENSIESRIVEL 791



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 89/191 (46%), Gaps = 27/191 (14%)

Query: 581 WYYPKTLDNLAFDLAALRLALCEPLDSVRLYLS-------RATLIVVPSYLVDHWKTQIQ 633
           W   +     A  + A  + + + + ++ L LS       + TL++ P+  +  W+ +I+
Sbjct: 218 WMKKQEAGPWAGGMLADEMGMGKTIQTISLILSDRKAGDGKQTLVIAPTVAIIQWRNEIE 277

Query: 634 QHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGR-----------RKKSP 682
           +  +   L + VW    + +       YD+V+T++  L + + R           RK++ 
Sbjct: 278 KFTKG--LKVNVWHGGNRSTDKKTMKSYDIVLTSYAVLESSFRRQNSGYRKFGELRKEAS 335

Query: 683 MMQ-VHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQP 741
           ++  +HW RV+LDE H +       N  + A  L A+ +W L+GTP  N    ++  L  
Sbjct: 336 LLHSIHWHRVILDEAHNIKD--RSCNTAKGAFELQATFKWCLSGTPLQN----RVGELYS 389

Query: 742 MLKFLHEEAYG 752
           +++FL  + +G
Sbjct: 390 LIRFLGADPFG 400


>gi|449540684|gb|EMD31673.1| hypothetical protein CERSUDRAFT_88802 [Ceriporiopsis subvermispora
           B]
          Length = 1191

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 24/213 (11%)

Query: 589 NLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD 648
            L   L  L L L    D + +  S++TLIVVP  ++ +W+ QI+ HV  G L   ++  
Sbjct: 461 GLGKTLTMLALILATKTD-IPIECSKSTLIVVPLSVLSNWEKQIEDHVVDGALTSCIYYG 519

Query: 649 HKKPSAHSLAWDYDVVITTFNRLSAEWG----------RRKKSPMMQ----VHWLRVMLD 694
             +  +      YD+VITT+  ++ E G          ++K+SP           RV+LD
Sbjct: 520 ASRSMSPDELKKYDIVITTYQTVTKEHGDMSAGSGESSKKKRSPRKDCSTCAGRFRVILD 579

Query: 695 EGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQ 753
           EGH++    N   K+  A+ +L A  RW+LTGTP  N+P      L  +L FL   +   
Sbjct: 580 EGHSI---RNPRTKMAKAVCALEAQRRWVLTGTPIINSPKD----LGSILTFLRICSPLD 632

Query: 754 NQKAWDGGILRPFEAEMEEGRSRLLQLL-HRCM 785
           N   +   +LRP + +   G   L  L+ H C+
Sbjct: 633 NDDFYKRMVLRPLKDDNPSGAELLRALMSHVCI 665



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 11/93 (11%)

Query: 163 MKLKLFPHQQAAVEWMLHREW----NAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTA 218
           +K+ L  HQ  A++W +  E+      E  +   +  L    G  FY N     +AT T 
Sbjct: 389 LKVDLLKHQSQALKWCIDHEYPQLPKTEADKPVQFWQLRKAGGKTFYFN-----LATNTP 443

Query: 219 PTMRDFHG-GMFC-DEPGLGKTITALSLILKTQ 249
             M    G G  C D  GLGKT+T L+LIL T+
Sbjct: 444 QMMAPVLGRGALCADSMGLGKTLTMLALILATK 476


>gi|358382887|gb|EHK20557.1| hypothetical protein TRIVIDRAFT_77600 [Trichoderma virens Gv29-8]
          Length = 1137

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K I+FSQF   + +IE  LT A IKF  +   M    +   L  F      + +LM   A
Sbjct: 987  KSIVFSQFTSFLTLIEAALTRANIKFLRLDGSMTQRARAAVLQQFTESKGFVVMLMSLRA 1046

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+   RVF+M+P W  ++E Q I R HR+G    + V+   +RG+VEE+ML+ 
Sbjct: 1047 GGVGLNLTSAGRVFMMDPWWSYAVELQAIDRVHRLGQQDEVVVKRFIVRGSVEERMLKI 1105



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 34/267 (12%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP------SAHSLAWD-----YDVV 664
           TL++ P  L+  W+++ ++  +PG + + ++   +K        + S A D     Y VV
Sbjct: 560 TLVIAPMSLLSQWQSEAEKASQPGTMKIQLYYGSEKALNLQSLCSGSNAPDLVITSYGVV 619

Query: 665 ITTFNRLSAEWGRRK-KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
           ++ F  ++A+ G R   + +  + + RV+LDE H + +  + T +      + A +RW L
Sbjct: 620 LSEFTSVAAKNGDRSFHTGIFSLKFFRVILDEAHYIKNRASKTAR--ACYEIAADHRWAL 677

Query: 724 TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
           TGTP  N    +L  L  +++FL  E +  N   W   I  PFE+        ++Q +  
Sbjct: 678 TGTPIVN----RLEDLFSLVRFLGVEPWN-NFSFWKTFITVPFESGDFVRALDVVQTVLE 732

Query: 784 CMISARKTDLQT--------IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDP 835
            +++ R  D++T        +P    E+  +  ++     Y+ +   V+           
Sbjct: 733 PLVTRRTKDMKTPDGQPLVQLPPKQIEIVEVELSKTERDIYDHIFNKVKNTF-------A 785

Query: 836 SHVESLLNPKQWKFRSTTIRNLRLSCC 862
            +VE+    K +      I  LR SCC
Sbjct: 786 QNVEAGTVLKAFTTIFAQIMRLRQSCC 812



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 17/98 (17%)

Query: 165 LKLFPHQQAAVEWMLHREWNAEVLR----HPLY------------IDLATEDG-FYFYVN 207
           + L P+Q+ ++ WML +E + +  R    HPL+             DL + +G   FYVN
Sbjct: 424 MTLRPYQRQSLHWMLAKEKDEQSHRELSMHPLWEEYMWPVKDVDDKDLPSVEGQSKFYVN 483

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             SGD+        +   GG+  DE GLGKTI  LSLI
Sbjct: 484 PYSGDLTLDFPVQEQHCLGGILADEMGLGKTIQMLSLI 521


>gi|295669226|ref|XP_002795161.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226285095|gb|EEH40661.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1282

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 73/120 (60%), Gaps = 2/120 (1%)

Query: 992  DKVIIFSQFLEHIH-VIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            +K+IIF +   +    I + L + G++F    + + +S++   L +F        LLMD 
Sbjct: 941  EKIIIFYEEGGNSGWYIAEALEILGVEFRIYSNTLKTSDRSAYLALFNTTELVRVLLMDL 1000

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              AS GLD+   +RVF++ PIWD ++E Q I RAHR+   +P++VETL ++ T+E++ML+
Sbjct: 1001 RQASHGLDIPCASRVFIVNPIWDPNVESQAIKRAHRISQGKPVYVETLVLKNTLEDKMLQ 1060



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 14/133 (10%)

Query: 607 SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--PSAHSLAWDYDVV 664
           + +L L   TL+VVPS LVDHW  +I +H +   L + V  D ++  P    L  +YDVV
Sbjct: 433 ATKLQLCSGTLVVVPSNLVDHWLNEINKHTQ--GLKVLVLRDSRRATPPPDQL-LEYDVV 489

Query: 665 ITTFNRLSAEWGRRKK---------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISL 715
           + +  R   E G R +         SP+  +HWLR+++DEGH        +  +     L
Sbjct: 490 LFSRPRFEKEAGGRTETSPSKLPYESPLKSLHWLRIIVDEGHNFAIKGGKSTAVHTLGQL 549

Query: 716 TASNRWLLTGTPT 728
               RW+++GTP+
Sbjct: 550 HVERRWVVSGTPS 562


>gi|451854920|gb|EMD68212.1| hypothetical protein COCSADRAFT_133689 [Cochliobolus sativus ND90Pr]
          Length = 1233

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            KVI+FSQF   + +IE  L  AG  F      M +  +  SL   R D     LL     
Sbjct: 1020 KVIVFSQFTSMLDLIEPFLNRAGYNFTRYDGSMRNDLREVSLQKLREDKRTRVLLCSLKC 1079

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV +MEP W+  +EEQ I R HR+  T  + V  L++  +VEE++LE L
Sbjct: 1080 GSLGLNLTAASRVVIMEPFWNPFVEEQAIDRVHRLNQTVDVTVYRLSIHNSVEERILE-L 1138

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 1139 QEAKR 1143



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 30/207 (14%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           + TL+V P  L+  W+++I   V +   L + V     +  +      YDVVITT+  L+
Sbjct: 450 KGTLVVAPLALIKQWESEINTKVTKSHALKVLVHHGPNRTKSADKLNQYDVVITTYQVLA 509

Query: 673 AEWGRRKKSP------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTG 725
           +E       P         V+W R+MLDE HT+    N   K+  A  ++ +  RW LTG
Sbjct: 510 SEHASCGDGPDGLKKGCFAVNWYRMMLDEAHTIK---NRNAKMTKACYAVNSHYRWCLTG 566

Query: 726 TPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLL 781
           TP  N     +  LQ +++FL  + Y +   +W   I  P    M+ GR  L    LQ+ 
Sbjct: 567 TPMQNN----IDELQSLIRFLRIQPYCE-LSSWKDSIAGP----MKNGRGNLAMKRLQVF 617

Query: 782 HRCMISARKTDLQTIPLCIKEVTFLNF 808
            R  +  R  D+      +++   LNF
Sbjct: 618 LRAFMKRRTKDV------LRKEGALNF 638


>gi|429856940|gb|ELA31828.1| snf2 family helicase [Colletotrichum gloeosporioides Nara gc5]
          Length = 1109

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 28/238 (11%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTF 668
           + + TL+V P  L+  W+++I++ V   + H      H  P       D   YDVV+TT+
Sbjct: 350 IEKTTLVVAPLALIRQWESEIKEKVV--KSHGLKVCVHHGPQRTKRFKDLALYDVVVTTY 407

Query: 669 NRLSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
             L +EWG         K+    +HW RV+LDE HT+ +    + K     +L +  RW 
Sbjct: 408 QVLVSEWGHSSEDENGVKAGCFGLHWWRVVLDEAHTIKNRNAKSTK--ACYALRSEYRWC 465

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           L+GTP  N     L  LQ ++KFL  + Y  + K W   I +P +        R L  L 
Sbjct: 466 LSGTPMQNN----LEELQSLIKFLRIKPY-DDLKEWKEQIEKPLKNGKGHVAIRRLHSLL 520

Query: 783 RCMISARKTDLQTIPLCIKEVTFLN----FTEEHAGTYNELVVTVRRNILMADWNDPS 836
           RC +  R  ++      +KE   LN     T+E   +     VT R+ + +A    P+
Sbjct: 521 RCFMKRRTKEI------LKEEGALNPGGKPTKEGEKSSTGFKVTERKVVTVATAFSPA 572



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 5/136 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + ++E      G+KF      M +  +  SL   R+D +   LL     
Sbjct: 902  KFIVFSQFTSMMDLVEPFFRKEGLKFTRYDGSMKNDEREASLHRLRNDKNTRILLCSLKC 961

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +  TVEE++L+  
Sbjct: 962  GSLGLNLTAATRVIILEPFWNPFVEEQAIDRVHRLTQTVDVVVYKLTVEKTVEERILQLQ 1021

Query: 1112 QDTDRCRRLLKEELVK 1127
            +     +RLL E  ++
Sbjct: 1022 EK----KRLLAETAIE 1033


>gi|347831364|emb|CCD47061.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 1064

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 92/204 (45%), Gaps = 27/204 (13%)

Query: 585 KTLDNLAFDLAALRLALCEPLDSVRLY---LSRATLIVVPSYLVDHWKTQIQQHVRPGQL 641
           KTL +++  L+  + +  +   S R     L + TL+V P  L+  W+ +I+  V   + 
Sbjct: 284 KTLQSISLILSNPKPSSSDETHSKRKLPSGLDKCTLVVAPLALIRQWEAEIKDKVE--ES 341

Query: 642 HLFVWTDHKKPSAHSLAWD---YDVVITTFNRLSAEWGRRKKSP--------MMQVHWLR 690
           H      H  P       D   +DVVITT+  L +EWG   K             +HW R
Sbjct: 342 HSLRVCVHHGPQRTKRFQDLRKFDVVITTYQILVSEWGNSSKDDDDEGVKVGCFGIHWYR 401

Query: 691 VMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEA 750
           V+LDE HT+ +        Q   SL +  RW LTGTP  N     L  LQ ++KFL  + 
Sbjct: 402 VILDEAHTIKN--RNAKATQACYSLRSQYRWCLTGTPMQNN----LDELQSLIKFLRIKP 455

Query: 751 YGQNQKAWDGGILRPFEAEMEEGR 774
           Y  N + W   I RP    M+ GR
Sbjct: 456 Y-DNLREWKDQIDRP----MKNGR 474



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + ++E  L   G K+      M +  +  SLD  R+D +C  LL     
Sbjct: 844  KFIVFSQFTSMLDLVEPFLRQKGYKYTRYDGGMKNDLREASLDRLRNDENCRVLLCSLKC 903

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+     + V  + ++ TVEE++L  L
Sbjct: 904  GSLGLNLTAATRVVILEPFWNPFVEEQAIDRVHRLTQKIDVIVYKITIKDTVEERIL-LL 962

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 963  QEKKR 967


>gi|154313972|ref|XP_001556311.1| hypothetical protein BC1G_04929 [Botryotinia fuckeliana B05.10]
          Length = 1065

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 92/204 (45%), Gaps = 27/204 (13%)

Query: 585 KTLDNLAFDLAALRLALCEPLDSVRLY---LSRATLIVVPSYLVDHWKTQIQQHVRPGQL 641
           KTL +++  L+  + +  +   S R     L + TL+V P  L+  W+ +I+  V   + 
Sbjct: 284 KTLQSISLILSNPKPSSSDETHSKRKLPSGLDKCTLVVAPLALIRQWEAEIKDKVE--ES 341

Query: 642 HLFVWTDHKKPSAHSLAWD---YDVVITTFNRLSAEWGRRKKSP--------MMQVHWLR 690
           H      H  P       D   +DVVITT+  L +EWG   K             +HW R
Sbjct: 342 HSLRVCVHHGPQRTKRFQDLRKFDVVITTYQILVSEWGNSSKDDDDEGVKVGCFGIHWYR 401

Query: 691 VMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEA 750
           V+LDE HT+ +        Q   SL +  RW LTGTP  N     L  LQ ++KFL  + 
Sbjct: 402 VILDEAHTIKN--RNAKATQACYSLRSQYRWCLTGTPMQNN----LDELQSLIKFLRIKP 455

Query: 751 YGQNQKAWDGGILRPFEAEMEEGR 774
           Y  N + W   I RP    M+ GR
Sbjct: 456 Y-DNLREWKDQIDRP----MKNGR 474



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + ++E  L   G K+      M +  +  SLD  R+D +C  LL     
Sbjct: 845  KFIVFSQFTSMLDLVEPFLRQKGYKYTRYDGGMKNDLREASLDRLRNDENCRVLLCSLKC 904

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+     + V  + ++ TVEE++L  L
Sbjct: 905  GSLGLNLTAATRVVILEPFWNPFVEEQAIDRVHRLTQKIDVIVYKITIKDTVEERIL-LL 963

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 964  QEKKR 968


>gi|406608172|emb|CCH40606.1| putative actin-dependent regulator of chromatin subfamily A member
           [Wickerhamomyces ciferrii]
          Length = 842

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 15/211 (7%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           +ATL++ P  L   W  +I++      L + ++    + + +    DYDV+I++++ + +
Sbjct: 300 KATLVICPVSLTTQWSQEIKKFA--PHLRVLIFHGPNRATNYKELKDYDVIISSYDTIRS 357

Query: 674 EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
           ++  ++KSP+ Q +W RV+LDE HT+ +    T+    A ++ +  RW LTGTP  N+  
Sbjct: 358 DF-EKEKSPIYQGYWYRVVLDEAHTIKNKKTKTS--IAAYNIESLRRWCLTGTPIQNS-- 412

Query: 734 SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF-EAEMEEGRSRLLQLLHRCMISARKTD 792
             +S LQ +  FL    +  N+  W+  I +   + + +E  S L + L   M+   K  
Sbjct: 413 --MSELQSLFIFLRISKFA-NENYWNLVISKTLKQGKAKEAFSLLKEELKEIMLRRTKAI 469

Query: 793 LQTIPLCIKEVTF----LNFTEEHAGTYNEL 819
           LQ+    +         + FTE     Y +L
Sbjct: 470 LQSTNFNLPPKNIHRCEIQFTELEEQLYTDL 500



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 4/131 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF E + ++   L   GI        M    K  +L+  R++     LL    S
Sbjct: 684  KTIVFSQFREMLLLMGPILKDHGISSVNYDGHMSLKQKDAALEKLRNNEDTTVLLCSLKS 743

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             +LGL+L+  ++V + +P W+  ++ Q I R +R+G TR + V   A++ +VEE++L+  
Sbjct: 744  GALGLNLTVASQVVIFDPWWNPQIQAQAIDRVYRIGQTRSVDVYEFAIKDSVEEEILKL- 802

Query: 1112 QDTDRCRRLLK 1122
               DR R L K
Sbjct: 803  --QDRKRNLAK 811


>gi|336276682|ref|XP_003353094.1| hypothetical protein SMAC_03412 [Sordaria macrospora k-hell]
 gi|380092579|emb|CCC09856.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1217

 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 25/197 (12%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH--KKPSAHSLAWDYDVVITTFN 669
           +S+ATL+V P  L+  W+ +++  V P  L++ V   H  K+ +  S    YDVVITT+ 
Sbjct: 419 ISKATLVVAPLALIRQWEAELKDRVMP-DLNIKVCVHHGPKRSTIPSELAKYDVVITTYQ 477

Query: 670 RLSAEWGRR-------KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            L +E+ +         ++    VHW RV+LDE H++ +    T   +   +L +  RW 
Sbjct: 478 ILVSEFDKSHPDLNKGAQAGCFGVHWFRVILDEAHSIKN--RNTKAAKACCALRSEYRWC 535

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL-LQLL 781
           LTGTP  N     L  LQ ++ FL    Y  N   W   I    +A M++G+  + +Q L
Sbjct: 536 LTGTPMQNN----LDELQSLIHFLRIAPY-DNLAEWRAQI----DAPMKQGKGHIAIQRL 586

Query: 782 H---RCMISARKTDLQT 795
           H   RC +  R  ++ T
Sbjct: 587 HSILRCFMKRRTKEVLT 603



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLT--VAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            K I+FSQF   + ++E  L   +  IK       M +  +  SL   R D     LL   
Sbjct: 999  KFIVFSQFTSMLDLVEPFLRHHLPDIKHVRYDGKMPNDAREASLHSLRKDPRTRVLLCSL 1058

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
               SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +RGTVE ++LE
Sbjct: 1059 KCGSLGLNLTAATRVIIVEPFWNPFVEEQAIDRVHRLTQTVDVVVYKLTVRGTVEARILE 1118

Query: 1110 FLQDTDRCRRLLKEELVKPERE 1131
              +     +RLL +  V+   E
Sbjct: 1119 LQEK----KRLLAQAAVEGSTE 1136


>gi|294659915|ref|XP_462354.2| DEHA2G18722p [Debaryomyces hansenii CBS767]
 gi|199434332|emb|CAG90861.2| DEHA2G18722p [Debaryomyces hansenii CBS767]
          Length = 834

 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 110/233 (47%), Gaps = 28/233 (12%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           +  LIV P  L + WK++I+   +   L + ++    +P  +    +YDVVITT+  +S+
Sbjct: 303 KTNLIVCPVSLTNQWKSEIES--KASGLSVMIFHGPDRPKKYEELAEYDVVITTYATVSS 360

Query: 674 EWGRRKKSPMM---QVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTP 729
           E+ +      +   +  W R++LDE H +    N  +K  +A+ +L A  RW LTGTP  
Sbjct: 361 EFHKSGSPSALYSPEFRWWRIILDEAHQIK---NKNSKQAIAVFNLDADRRWCLTGTPLQ 417

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEA--------EMEEGRSRLLQLL 781
           N     L  LQ + KF+    Y  + K W   I R  +         E+ +  S L+   
Sbjct: 418 N----NLGELQSLFKFIRVSKYA-DDKIWSDTIQRSLQERDMYTALFELRDELSNLMLRR 472

Query: 782 HRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWND 834
            + ++S+     +  P  + ++  + F+E     YN +     ++I++++ N+
Sbjct: 473 TKAILSSSHNTFKLPPKNVHKI-MVEFSEFERSIYNNV-----KHIILSNLNN 519



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K IIFSQF     V+   L+  G K       M    +  +L+  ++D     LL     
Sbjct: 671  KTIIFSQFPSLFKVLGDTLSTKGFKILTYDGSMDIKARNFALNSLKNDPDMNVLLCSLKC 730

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S+GL+L+  ++V L +P W+  ++EQ I R +R+G T+P+ +  L ++ TVE+ +L+ L
Sbjct: 731  GSVGLNLTCASQVILFDPWWNPQIQEQAIDRVYRIGQTKPVDIYELTVKNTVEDNILK-L 789

Query: 1112 QDTDR 1116
            Q T R
Sbjct: 790  QKTKR 794


>gi|396490206|ref|XP_003843281.1| hypothetical protein LEMA_P073910.1 [Leptosphaeria maculans JN3]
 gi|312219860|emb|CBX99802.1| hypothetical protein LEMA_P073910.1 [Leptosphaeria maculans JN3]
          Length = 994

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 98/187 (52%), Gaps = 12/187 (6%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
           ATL++VP  L+  W+ QI+ H+    L +      ++ S        ++++TT++ + A+
Sbjct: 419 ATLVIVPQPLLSTWEEQIKDHIEVDGLKVRRHHGKQRLSLIEQINAANIILTTYHTVRAD 478

Query: 675 WGRRK---KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPN 730
           W + +    S +  V W R++LDE H +    N+  ++  +I SL + +RW +TGTP  N
Sbjct: 479 WQKGEVPANSILFTVRWKRIILDEAHLVR---NMKTRMARSICSLESVSRWAVTGTPIQN 535

Query: 731 TPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK 790
               QLS L  +LKF+    Y  + K +D  I + +++  +E   + L+ L RC+I  R 
Sbjct: 536 ----QLSDLTALLKFIRAYPY-DDPKKFDTDISQLWKSGEDEEAVKRLKRLSRCLILRRA 590

Query: 791 TDLQTIP 797
               T+P
Sbjct: 591 KHTITLP 597



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 63/132 (47%), Gaps = 17/132 (12%)

Query: 995  IIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLM------ 1048
            I+FS +   + +IE  L  A I+       +  + +   L+ F+ + +   +L+      
Sbjct: 821  IVFSTWRMTLDIIEAALEQAQIRSVRFDGKVAQTQRQPVLNEFKSNPNVRIILLTLECGA 880

Query: 1049 -----------DGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
                       + +  + L L+  +R +LMEP W+ ++EEQ ++R HR+G  R +     
Sbjct: 881  VGSVGPPASIKNANCIIRLTLTAASRAYLMEPHWNPTVEEQALARIHRIGQKREVTTIRF 940

Query: 1098 AMRGTVEEQMLE 1109
             +R + EE+++E
Sbjct: 941  YIRDSFEERVIE 952


>gi|167998999|ref|XP_001752205.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
           patens]
 gi|162696600|gb|EDQ82938.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
           patens]
          Length = 1520

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 160/362 (44%), Gaps = 72/362 (19%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS--------------------- 653
           ATL+V P+ ++  W+ +I +HVRPG L + V+   +K +                     
Sbjct: 388 ATLVVCPTPILRQWQDEISRHVRPGTLRVLVYEGVQKGATVVSGKGSLESSKVEKIKTVG 447

Query: 654 AHSLAWDYDVVITTFNRLSAE--------------WGRRKKSPMM-----QVHWLRVMLD 694
           AH LA   D+V+TT++ L A+              + + K+ P++     ++ W R+ LD
Sbjct: 448 AHDLA-TADLVLTTYDTLRADVSHAATASHKIVRSFRQPKRYPVVPTALTRLKWWRLCLD 506

Query: 695 EGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQN 754
           E   + S   L    +MA++L  ++RW +TGTP        L  L  +L+FL  E +  N
Sbjct: 507 EAQMVESV--LARATEMAMTLRTTHRWCVTGTPI----QRGLDDLYGLLRFLRAEPF-DN 559

Query: 755 QKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI----SARKTDLQTIPLCIKEVTFLNFTE 810
           ++ W   +  P+E E + G  R +  L R ++     A+  D   +P   + + +L F+ 
Sbjct: 560 KRWWTVVLKEPYE-EGKYGAVRAMHDLFRGLMWRSTKAQVADELGLPPQDERLDWLRFSP 618

Query: 811 EHAGTY-----------NELVVTVRRNILMADWNDPSHVES-LLNPKQWKFRSTTIRNLR 858
             A  Y            E++   R+++    +   S +E  LL+ K+ +     +R LR
Sbjct: 619 IEAHFYRQQHERCAVRAREVIANYRKHLSTRSYGRRSQLEDRLLSNKEAEKLLDQLRCLR 678

Query: 859 LSCCVAGHIKVTDAG-EDIQE---TMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRHILC 914
            +C    H +V  AG   +Q    TMD ++E  +D    E    + +L    N L  +  
Sbjct: 679 QACV---HPQVGSAGIRSLQRSPMTMDEILEVLVDKAKLEAEDAQRSLFGALNGLAGLAI 735

Query: 915 LD 916
           +D
Sbjct: 736 ID 737



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 21/137 (15%)

Query: 991  PD-KVIIFSQFLEHIHVIEQQLTVAGI----------------KFAGMYSPM---HSSNK 1030
            PD KV++FS++   + V+E  L    I                +F G+   +    SS K
Sbjct: 1307 PDMKVLLFSEWQGVLDVVEHALKTNHITFTRVKRGGQINDAIDRFRGVEETVGKKRSSRK 1366

Query: 1031 IKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATR 1090
              ++D  +     L + +   A+ GL+L     V L+EP+ + +ME Q I+R HR+G TR
Sbjct: 1367 RANVDEVQGPVQVLLMPIRHGAN-GLNLVEAQHVMLLEPLLNPAMEAQAINRVHRIGQTR 1425

Query: 1091 PIHVETLAMRGTVEEQM 1107
               V    +  TVEE +
Sbjct: 1426 ATFVHRFIVHDTVEESI 1442


>gi|324501030|gb|ADY40465.1| Transcription termination factor 2 [Ascaris suum]
          Length = 1277

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 49/239 (20%)

Query: 600 ALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW--TDHKKPSAHSL 657
           ALC+     RL  SRATL++ P+ L+  W+ +I +HV+ G+L + ++     K+      
Sbjct: 685 ALCDN----RLIPSRATLVIAPASLIFQWEAEIDRHVKAGRLTVLIFHGAKQKREDDPRR 740

Query: 658 AWDYDVVITTFNRLSAEWG-------------------------RRK--KSP---MMQVH 687
              YDVVITT+N L++E G                         RRK  K+P   + ++ 
Sbjct: 741 MARYDVVITTYNLLASELGEKPTILGGSDSDSDDGGVVRPKVAIRRKIAKNPGSVLAKIA 800

Query: 688 WLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
           W R++LDE H + +  +L +K      L A++RW LTGTP  N    +L  L  +++FL 
Sbjct: 801 WDRIVLDEAHQIKNKTSLASK--ACCRLAAASRWCLTGTPIHN----KLWDLFSLVRFLR 854

Query: 748 EEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFL 806
              + + +  W   I+     + +   +RL  L+   ++  R+T  Q  P  +K +  L
Sbjct: 855 VTPFDE-EAVWKEWIM----GQSQTSANRLNTLIKGLLL--RRTKDQICPHSLKPIVDL 906



 Score = 47.4 bits (111), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 62/126 (49%), Gaps = 2/126 (1%)

Query: 989  ALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF-RHDASCLALL 1047
            AL DK +I SQ+   + ++E  L    +++  +   + + ++   ++ F R       +L
Sbjct: 1086 ALGDKCVIVSQWTSLLDIVEYHLKQRDVQYTSITGKVLTKDRQPRVESFNRVGGGARVML 1145

Query: 1048 MDGSASLGLDLSFVT-RVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQ 1106
            +  +A            +FL++  W+ ++E+Q   R +RMG T+ + +  +   GT+EE+
Sbjct: 1146 LSLTAGGVGLNLVGGNHLFLIDLHWNPALEQQACDRIYRMGQTKEVFIHKIICLGTIEER 1205

Query: 1107 MLEFLQ 1112
            +L   Q
Sbjct: 1206 VLTLQQ 1211


>gi|46108188|ref|XP_381152.1| hypothetical protein FG00976.1 [Gibberella zeae PH-1]
          Length = 1107

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 9/139 (6%)

Query: 596 ALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAH 655
           A R A    L   ++YLS  +++VVPS L+  WK +I++H    ++ +    DH  P   
Sbjct: 367 ARRSAGTVELSKKQVYLSNGSIVVVPSNLLAQWKQEIKKHTEDLRVLVMEGHDHLPPP-- 424

Query: 656 SLAWDYDVVITTFNRLSA---EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
            +  +YD+++ + +RL A   + G    SP+ QVH+ R ++DEGH LG+S  ++ K  M 
Sbjct: 425 KVLLEYDMILFSQSRLEALKRQAGGVDASPLSQVHFKRCIVDEGHKLGNS-RISGKSDML 483

Query: 713 I---SLTASNRWLLTGTPT 728
           +   SL  S+RW++TGTP+
Sbjct: 484 LVLESLHVSSRWIVTGTPS 502



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 152 LRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSG 211
           +R L    +  +  +L+P+Q+ +   ML +E   E +  P  + +  ++G  +Y + VS 
Sbjct: 192 IRNLLNGTIVGLNSELYPYQRRSAALMLQKEVQPEQILDPRLLQIQDQEGGSWYFDPVSS 251

Query: 212 DIATGTAPTMRD-FHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKI 261
            I     P   D   GG+  +E G GKTI  L+LIL T+   A PP+ + +
Sbjct: 252 TILKD--PRYYDGVCGGILAEEMGAGKTIICLALILATRDLPAQPPEHLSV 300



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
            A+ GLD+   +R+F + P+ +  +E Q I RA R+   + + VETL ++ ++EE +LE  
Sbjct: 908  AAFGLDMREASRIFFISPVLNPQVEAQAIGRARRISQKKAVFVETLVLKDSIEEVILERK 967

Query: 1112 Q 1112
            Q
Sbjct: 968  Q 968


>gi|412988136|emb|CCO17472.1| DNA repair protein RAD16 [Bathycoccus prasinos]
          Length = 1867

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 73/122 (59%), Gaps = 1/122 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K +IF+QF + I  ++++L   G  F  +   M + N+ KS+  F+ D      ++   
Sbjct: 1579 NKALIFTQFAQTIEWLQKRLPDEGFGFRTISGSMSAKNRDKSIQAFQKDPPTTVFILSVR 1638

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            S ++G++L+  + VF++EP  + ++E Q I RA RMG TRP+ V+ L ++ ++E  +++ 
Sbjct: 1639 SGAVGINLTAASHVFMIEPCMNPALENQAIGRAWRMGQTRPVTVKILTVQDSIETNIVKL 1698

Query: 1111 LQ 1112
            +Q
Sbjct: 1699 VQ 1700



 Score = 57.0 bits (136), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 6/119 (5%)

Query: 611  YLSRATLIVVPSYLVDHWKTQIQQHVR--PGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
            Y S ATL++    LV  W  + +  +    G   L      +  +   +A DYD+V+TT+
Sbjct: 1228 YRSGATLVICAVSLVGQWIDEAKSKLDEDSGLRILMYHGQQRTKNPKKIAEDYDLVVTTY 1287

Query: 669  NRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
              L+A+  R + +P+ Q+ + R++ DE H +  S N T + + A  + A  RW  TGTP
Sbjct: 1288 QTLAAD--RSRTNPLGQIEFYRLVCDESH-MTKSYN-TGQSKAASEICAVRRWACTGTP 1342


>gi|449299373|gb|EMC95387.1| hypothetical protein BAUCODRAFT_25426 [Baudoinia compniacensis UAMH
            10762]
          Length = 1361

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 76/134 (56%), Gaps = 7/134 (5%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+++F       + I Q L V  IK     + + ++ K + +  F  +     LLMD  
Sbjct: 1024 EKILVFYDGDNTAYYIAQMLEVLHIKHEIYANSLPANLKSEYVVRFDQEVQDRVLLMDVK 1083

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             A+ GL+LS  +RV+ + P+   ++E Q I RAHR+G TR ++VETL ++GT+EE+MLE 
Sbjct: 1084 QAAFGLNLSSASRVYFVNPVCRPNIEAQAIKRAHRIGQTRKVYVETLVLKGTIEEKMLE- 1142

Query: 1111 LQDTDRCRRLLKEE 1124
                 R +R+ + E
Sbjct: 1143 -----RSKRMTRSE 1151



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 40/155 (25%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD--HKKPSAHSLAWDYDVVITT 667
           + L+  TLIVVP  L   W++++++HV  G L + V  D  H  P    L   YDVV+ +
Sbjct: 418 MILAATTLIVVPRNLCKQWQSELKKHVEDGALKVLVMEDPKHVIPPPEELR-TYDVVLFS 476

Query: 668 FNRL-------SAEWGRR---------------------------KKSPMMQVHWLRVML 693
             R        S E GRR                             SP+  +H+ R+++
Sbjct: 477 RTRFEREIRDGSDEQGRRLTQRLCRCPFIGSTRTRDCHCPRSDDLYDSPLKHLHFKRLIV 536

Query: 694 DEGHTLGSSLNLTNKLQMAISL-TASNRWLLTGTP 727
           DEGH   S+    N + +A S+ TA +RW+++GTP
Sbjct: 537 DEGHYFSSTSG--NAVAVANSIVTADHRWVVSGTP 569



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 157 ASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATG 216
           AS +P ++  L+P+Q+ +   ML RE   ++   P        DG  +Y    S D+   
Sbjct: 241 ASALPGLRTVLYPYQRRSAGLMLQREAVVQMQLDPRLEQRIAPDGTIYYFG--SRDLLFL 298

Query: 217 TAPTMRDF-HGGMFCDEPGLGKTITALSLILKTQ 249
             P   +   GG+  +  GLGKT+  L+LIL T+
Sbjct: 299 RYPRYYELCRGGILAETMGLGKTVMLLALILATK 332


>gi|85097277|ref|XP_960412.1| hypothetical protein NCU11284 [Neurospora crassa OR74A]
 gi|28921903|gb|EAA31176.1| conserved hypothetical protein [Neurospora crassa OR74A]
 gi|39979195|emb|CAE85566.1| conserved hypothetical protein [Neurospora crassa]
          Length = 1197

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 25/197 (12%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH--KKPSAHSLAWDYDVVITTFN 669
           +S+ATL+V P  L+  W+ +++  V P  L++ V   H  K+ +  +    YDVVITT+ 
Sbjct: 372 ISKATLVVAPLALIRQWEAELKDRVMP-DLNIKVCVHHGPKRSTVPAELAKYDVVITTYQ 430

Query: 670 RLSAEWGRRKKSPM-------MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            L +E  +    P          VHW RV+LDE H++ +    T   +   +L +  RW 
Sbjct: 431 ILVSEHDKSHPDPNKGAQAGCFGVHWFRVILDEAHSIKN--RNTKAAKACCALRSEYRWC 488

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL-LQLL 781
           LTGTP  N     L  LQ ++ FL    Y  N   W   I  P    M++G+  + +Q L
Sbjct: 489 LTGTPMQNN----LDELQSLIHFLRIAPY-DNLTEWRAQIDTP----MKQGKGHIAIQRL 539

Query: 782 H---RCMISARKTDLQT 795
           H   RC +  R  ++ T
Sbjct: 540 HSILRCFMKRRTKEVLT 556



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLT--VAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            K I+FSQF   + ++E  L   +  IK       M +  +  SL   R D     LL   
Sbjct: 980  KFIVFSQFTSMLDLVEPFLRHHLPDIKHVRYDGKMSNDAREASLHSLRKDPRTRILLCSL 1039

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
               SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +RGTVE ++LE
Sbjct: 1040 KCGSLGLNLTAATRVIIVEPFWNPFVEEQAIDRVHRLTQTVDVVVYKLTVRGTVEARILE 1099

Query: 1110 FLQDTDRCRRLLKEELVKPERE 1131
              +     +RLL +  V+   E
Sbjct: 1100 LQEK----KRLLAQTAVEGSTE 1117


>gi|154287644|ref|XP_001544617.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150408258|gb|EDN03799.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 1117

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 79/140 (56%), Gaps = 8/140 (5%)

Query: 1007 IEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVF 1065
            I + L + G++F    + + +  + + L +F    S   LLMD   A+ GL ++  +RVF
Sbjct: 853  IAEGLELLGVEFRIYANTLKTKTRSEYLSLFNETESVRVLLMDLRQAAHGLHIACASRVF 912

Query: 1066 LMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEEL 1125
            ++ PIWD + E Q I RAHR+   +P++VETL ++GT+E++ML       R +++   EL
Sbjct: 913  IVNPIWDPNFESQAIKRAHRISQNKPVYVETLVLKGTLEDRMLR------RRKQMSNAEL 966

Query: 1126 VKPEREGARSHRTLHDFAES 1145
               E++     RT+ D  ++
Sbjct: 967  RHAEKD-PLDDRTMSDIIQT 985



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 19/136 (13%)

Query: 607 SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK--KPSAHSLAWDYDVV 664
           + +L L   TLI+VPS LVDHW ++I +H +   L + V  D +   P    L  +YD++
Sbjct: 416 ATKLQLCSGTLIIVPSNLVDHWLSEIDKHTQ--GLKVLVLRDSRCATPQPEKL-LEYDIL 472

Query: 665 ITTFNRLSAEW---GRR---------KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
           +  F++   EW   GRR         ++SP+ ++HWLRV++DEGH   +    +      
Sbjct: 473 L--FSKPRFEWEAGGRRSLGLSMEPTEESPLKKLHWLRVIVDEGHNFAAKGGRSTAAHTL 530

Query: 713 ISLTASNRWLLTGTPT 728
             L    RW+++GTP+
Sbjct: 531 GQLHIERRWVVSGTPS 546


>gi|238602372|ref|XP_002395662.1| hypothetical protein MPER_04252 [Moniliophthora perniciosa FA553]
 gi|215466782|gb|EEB96592.1| hypothetical protein MPER_04252 [Moniliophthora perniciosa FA553]
          Length = 167

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/118 (31%), Positives = 71/118 (60%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQ+   +  +E  L VAGI++A +   M   ++ ++ +  +HD     L++   A
Sbjct: 15   KTVVFSQWTTMLDKVEDALEVAGIRYARLDGTMKRDDRTRATEALKHDPGREVLVVTLRA 74

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RV++M+P W+ ++E Q ++R  R+G TRP+    L  +G +E+++LE
Sbjct: 75   GGVGLNLNVDQRVYVMDPYWNPAVENQAVARILRLGQTRPVTTVKLITQGAIEDRILE 132


>gi|25465825|pir||T51892 hypothetical protein B23I11.40 [imported] - Neurospora crassa
          Length = 1173

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 25/197 (12%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH--KKPSAHSLAWDYDVVITTFN 669
           +S+ATL+V P  L+  W+ +++  V P  L++ V   H  K+ +  +    YDVVITT+ 
Sbjct: 348 ISKATLVVAPLALIRQWEAELKDRVMP-DLNIKVCVHHGPKRSTVPAELAKYDVVITTYQ 406

Query: 670 RLSAEWGRRKKSPM-------MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            L +E  +    P          VHW RV+LDE H++ +    T   +   +L +  RW 
Sbjct: 407 ILVSEHDKSHPDPNKGAQAGCFGVHWFRVILDEAHSIKN--RNTKAAKACCALRSEYRWC 464

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL-LQLL 781
           LTGTP  N     L  LQ ++ FL    Y  N   W   I  P    M++G+  + +Q L
Sbjct: 465 LTGTPMQNN----LDELQSLIHFLRIAPY-DNLTEWRAQIDTP----MKQGKGHIAIQRL 515

Query: 782 H---RCMISARKTDLQT 795
           H   RC +  R  ++ T
Sbjct: 516 HSILRCFMKRRTKEVLT 532



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLT--VAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            K I+FSQF   + ++E  L   +  IK       M +  +  SL   R D     LL   
Sbjct: 956  KFIVFSQFTSMLDLVEPFLRHHLPDIKHVRYDGKMSNDAREASLHSLRKDPRTRILLCSL 1015

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
               SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +RGTVE ++LE
Sbjct: 1016 KCGSLGLNLTAATRVIIVEPFWNPFVEEQAIDRVHRLTQTVDVVVYKLTVRGTVEARILE 1075

Query: 1110 FLQDTDRCRRLLKEELVKPERE 1131
              +     +RLL +  V+   E
Sbjct: 1076 LQEK----KRLLAQTAVEGSTE 1093


>gi|345570955|gb|EGX53770.1| hypothetical protein AOL_s00004g429 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1157

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 1/122 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQF   I++IE  LT   I+F      M    +   L  F+     L LL+   +
Sbjct: 1006 KSVVFSQFTSFINLIEPALTRERIQFVRFDGGMSQQQRSVVLSKFKAHTGGLVLLISLKA 1065

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              +GL+L+   RVF+M+P W  ++E Q I R HRMG T  + V    ++G+VEE+M+  +
Sbjct: 1066 GGVGLNLTEAKRVFMMDPWWSFAVEAQAIDRIHRMGQTDEVIVHRFIVKGSVEERMVHKI 1125

Query: 1112 QD 1113
            Q+
Sbjct: 1126 QE 1127



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 108/266 (40%), Gaps = 28/266 (10%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK----------PSAHS----LAWDY 661
           TL+V P  L+  W ++ +   + G L   ++    K           +AH+    +   Y
Sbjct: 571 TLVVAPMSLLSQWASEAEAASKTGTLKTTIYYGSDKSLDLRAQCSAANAHNAPNLIITSY 630

Query: 662 DVVITTFNRL--SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
            VV++ F ++  +A   R     +  V + R++LDE H + +  + T K      L A +
Sbjct: 631 GVVLSEFTQIANTASGSRATSGGLFSVQFFRIILDEAHNIKNRQSKTAK--ACYELDALH 688

Query: 720 RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ 779
           RW+LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE++       ++Q
Sbjct: 689 RWVLTGTPIVN----RLEDLFSLVRFLRVEPWS-NFAYWRTFITVPFESKDFLRALDVVQ 743

Query: 780 LLHRCMISARKTDLQT---IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPS 836
            +   ++  R  D++     PL       +   E         V     N +   + D  
Sbjct: 744 TVLEPLVMRRTKDMRQPDGTPLVYLPPKTILIEEIELSKAERAVYDFVYNFVKRSFADNM 803

Query: 837 HVESLLNPKQWKFRSTTIRNLRLSCC 862
              S++  K +      I  LR SCC
Sbjct: 804 EAGSVM--KSYTTIFAQILRLRQSCC 827



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 18/99 (18%)

Query: 165 LKLFPHQQAAVEWMLHREWNA-----EVLRHPLYIDLA-------------TEDGFYFYV 206
           + L  +Q+ A+ WML++E +      E   HPL+ +                E+   FYV
Sbjct: 436 MDLRKYQKQALHWMLNKERDKKNEGQEESMHPLWEEYTWPIKDENDKELPTVENQEKFYV 495

Query: 207 NTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           N  SGD++       ++  GG+  DE GLGKTI  LSLI
Sbjct: 496 NPYSGDLSLKFPVQEQNCLGGILADEMGLGKTIEMLSLI 534


>gi|226290023|gb|EEH45507.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 1252

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 8/160 (5%)

Query: 992  DKVIIFSQFLEHIH-VIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            +K+IIF +   +    I + L + G++F    + + +S++   L +F        LLMD 
Sbjct: 918  EKIIIFYEEGGNSGWYIAEALEILGVEFRIYSNTLKTSDRSAYLALFNTTELVRVLLMDL 977

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              AS GLD+   +RVF++ PIWD ++E Q I RAHR+   +P++VETL ++ T+E++ML 
Sbjct: 978  RQASHGLDIPCASRVFIVNPIWDPNVESQAIKRAHRISQGKPVYVETLVLKNTLEDKMLR 1037

Query: 1110 FLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLS 1149
                  R +++   EL   E++    H   +      ++S
Sbjct: 1038 ------RRKQMSNAELRHAEKDPLDDHTMSYIIQNEGFIS 1071



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 16/134 (11%)

Query: 607 SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK---PSAHSLAWDYDV 663
           + +L L   TL+VVPS LVDHW  +I +H +   L + V  D ++   P  H L  +YDV
Sbjct: 410 ATKLQLCSGTLVVVPSNLVDHWLNEINKHTQ--GLKVLVLRDSRRATPPPNHLL--EYDV 465

Query: 664 VITTFNRLSAEWGRRKK---------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
           V+ +  R   E G R +         SP+  +HWLR+++DEGH        +  +     
Sbjct: 466 VLFSRPRFEREAGGRTETSPSKLPYESPLKSLHWLRIIVDEGHNFAIKGGKSTAVHTLGQ 525

Query: 715 LTASNRWLLTGTPT 728
           L    RW+++GTP+
Sbjct: 526 LHVERRWVVSGTPS 539


>gi|51244847|ref|YP_064731.1| helicase [Desulfotalea psychrophila LSv54]
 gi|50875884|emb|CAG35724.1| probable helicase [Desulfotalea psychrophila LSv54]
          Length = 1399

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 70/121 (57%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF+ H+H+I + L   GI +  +     S  + K ++ F+     L L+   + 
Sbjct: 1248 KALVFSQFIGHLHIIREYLDERGISYQYLDGSTSSKMREKGVNDFQAGKGDLFLISLKAG 1307

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
             LGL+L+    V  M+P W+ ++E+Q   RAHR+G TRP+ V  L  + ++EE++++  Q
Sbjct: 1308 GLGLNLTAADYVLHMDPWWNPAIEDQASDRAHRIGQTRPVTVYRLVSKNSIEEKIVKLHQ 1367

Query: 1113 D 1113
            +
Sbjct: 1368 E 1368



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 38/274 (13%)

Query: 599  LALCEPLDSVRLYLSRA----TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA 654
            + L + L S+ L L+ +    TL+V P+ + ++W+ ++++     +L +    D KK + 
Sbjct: 971  MGLGKTLQSLALILTLSENGPTLVVAPTSVANNWRAEVKKFTPTLKLKVLAHGDRKK-TI 1029

Query: 655  HSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
              L   +D++ITT+  L  E        +  V W  V+LDE   + ++   T + + A+ 
Sbjct: 1030 EDLG-SHDLLITTYTLLQQE-----SELLSGVDWQTVVLDEAQAIKNA--ATKRSKAAMG 1081

Query: 715  LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME-EG 773
            L A  + + TGTP  N     L  L  +L F++    G  Q +++     P E   + E 
Sbjct: 1082 LKAKFKLITTGTPIEN----HLGELWNLLHFVNPGLLGTLQ-SFNENFAIPIERYQDREA 1136

Query: 774  RSRLLQLLHRCMISARKTD-LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
            R++L +L+   ++   K++ L  +P   +    +  +EE    Y  L    R+N L    
Sbjct: 1137 RTKLKKLIRPFILRRIKSEVLDELPPRTEITLEVQMSEEERHFYEAL----RQNAL---- 1188

Query: 833  NDPSHVESLLNPKQWKFRS----TTIRNLRLSCC 862
                  + L   K  K R     T I  LR +CC
Sbjct: 1189 ------DILEGNKDRKGRHLQILTEIMKLRQACC 1216


>gi|358386099|gb|EHK23695.1| hypothetical protein TRIVIDRAFT_123181, partial [Trichoderma virens
            Gv29-8]
          Length = 946

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 6/143 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + ++E  L   G +F      M +  + +SL   R D +   LL     
Sbjct: 747  KFIVFSQFTSMLDLVEPFLRKEGFRFTRYDGSMRNDAREESLRKLREDKATRVLLCSLKC 806

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +  TVEE +LE  
Sbjct: 807  GSLGLNLTAATRVIIIEPFWNPFVEEQAIDRVHRLTQTVDVVVYKLTVTHTVEEGILELQ 866

Query: 1112 QDTDRCRRLLKEELVK-PEREGA 1133
            +     +RLL E+ ++   R+GA
Sbjct: 867  EK----KRLLAEQTIEGSSRKGA 885



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 91/193 (47%), Gaps = 25/193 (12%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTF 668
           + + TL+V P  L+  W+T+I + V   + H      H  P       D   YDVVITT+
Sbjct: 189 VDKTTLVVAPLALIRQWETEINERV--AKTHGLKVLVHHGPQRTKQPEDLKLYDVVITTY 246

Query: 669 NRLSAEWGRRK---KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLT 724
             L +E G+     K+    +HW RV+LDE HT+    N   K   A  +L +  RW L+
Sbjct: 247 QILVSEHGKSSDDVKTGCFGLHWWRVILDEAHTIK---NRNAKATKACCALQSEYRWCLS 303

Query: 725 GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL-LQLLH- 782
           GTP  N     L  LQ ++KFL    Y  + KAW   I  P    M+ G+  + L  LH 
Sbjct: 304 GTPMQNN----LEELQSLIKFLRIRPY-DDIKAWKDQIELP----MKGGKGHIALGRLHS 354

Query: 783 --RCMISARKTDL 793
             RC +  R  ++
Sbjct: 355 FLRCFMKRRTKEI 367


>gi|240278065|gb|EER41572.1| SNF2 family helicase/ATPase [Ajellomyces capsulatus H143]
          Length = 1028

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 22/217 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TL+V P  L+  W+++I   V    +L + ++   ++         +DVVITT+  
Sbjct: 325 VGKGTLVVAPLALIKQWESEIGSKVEASHRLRVCIYHGTQRTKHADTLSQFDVVITTYGT 384

Query: 671 LSAEWGRRKKSPM--MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           LS+E    +K P      HW R++LDE HT+ +        Q A +L +  RW LTGTP 
Sbjct: 385 LSSEHAASEKKPTGCFANHWYRIILDEAHTIKN--RNAKATQAACALKSEYRWCLTGTPM 442

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRC 784
            N     L  LQ ++ FL  + Y  +  AW   I +P    +  GR     R LQ+  + 
Sbjct: 443 QNN----LDELQSLINFLRIKPY-NDLAAWREQITKP----LNNGRGGLAIRRLQVYLKA 493

Query: 785 MISARKTDLQTIPLCIKEVTFL--NFTEEHAGTYNEL 819
            +  R  D+  + +  +EV  +  +FT      Y  L
Sbjct: 494 FMKRRTKDV--LKITNREVLKIEADFTPAERAFYKRL 528



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   ++ IE  L  + I +      M +  +  SLD  R+      LL    +
Sbjct: 809  KFIVFSFFTSMLNKIEPFLKDSHIGYVRYDGAMRNDLREISLDKLRNSPKTRVLLCSLRA 868

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  L ++ TVEE++++ L
Sbjct: 869  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKLTIKNTVEERIVD-L 927

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 928  QERKR 932


>gi|116198109|ref|XP_001224866.1| hypothetical protein CHGG_07210 [Chaetomium globosum CBS 148.51]
 gi|88178489|gb|EAQ85957.1| hypothetical protein CHGG_07210 [Chaetomium globosum CBS 148.51]
          Length = 1480

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 170/405 (41%), Gaps = 72/405 (17%)

Query: 547 SPILGSYAAGETQGFHKIFQAFGLIRRVEKGI--TRWYYPKTLDNLAFDLAALRLA---- 600
           SP+LG+ A  +T     IFQ F ++R    GI        KTL+ +A  L   R      
Sbjct: 297 SPLLGA-ATKDT----SIFQPFQVLR---GGILAEEMGLGKTLEMIALILLHQRPESPPM 348

Query: 601 LCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHV-------RPGQLHLFVWTDHKKPS 653
           + +P     L  + ATLIV PS L+D W +++ +H         PG   +       + S
Sbjct: 349 VFDPNLGRELLTTSATLIVAPSSLLDQWLSELNRHAPGLKVVFYPGIKEMAKLKGENELS 408

Query: 654 AHSLAWDYDVVITTFNRLSAE-WG---------------RRKKSPMMQVHWLRVMLDEGH 697
              LA + +VV+TT++ L  E W                 R KSP++Q+ W RV +DE  
Sbjct: 409 VEKLA-EQNVVVTTYDVLRKEIWAASDEPTRSMRNEQQYERVKSPLVQLSWWRVCIDEAQ 467

Query: 698 TLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKA 757
            + +  N  N  ++A  +   N W +TGTP  +     L  L   L FL  E Y  + K 
Sbjct: 468 MVENWAN--NAAKLARKIPRINAWGVTGTPVKDDIQKDLRGL---LLFLRHEPYASDTKT 522

Query: 758 WDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ-------TIPL-CIKEVTFLNFT 809
           W+   L  F+ E        + + H   +   + D+        T+P   +++  + +  
Sbjct: 523 WN--FLTTFDKESFRKIFNSISMRHSKSLVRNEIDIPPQKRYVITMPFTAVEDQHYQSLF 580

Query: 810 EEHAGTYNELVVTVRRNILMADWN--DPSHVESLLNPKQWKFRSTTI------RNLRLSC 861
           EE AGT     +  R N L ADW+  DP  V+  +     + R T +      RN R   
Sbjct: 581 EELAGTCG---LDARGNPLQADWDPEDP-EVQRSMRVALDRLRQTVLHPEVGNRNRRGPG 636

Query: 862 CVAGHIKVTDAGEDIQETMDVLVENGLDPL-SQEYAFIKYNLLNG 905
              G ++       + E +D ++E     + + + AF+   LL G
Sbjct: 637 QKTGPMRT------VAEVLDAMLEQTDSSVRTDQRAFLSAGLLKG 675



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 8/116 (6%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K I+FSQ+ E + V    L +A  ++   Y+   S +K   + +F+ D      L+   A
Sbjct: 1263 KSIVFSQYKEFLDV----LALAFRRYRIGYT---SFDKAHGIAIFKEDPGTEVFLLHARA 1315

Query: 1053 -SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
             + GL+L     VFL EP+ + ++E Q I+R  R+G      V    + GTVEE +
Sbjct: 1316 HASGLNLVNANHVFLCEPLLNTALELQAIARVDRIGQQHGTTVWLYIVDGTVEESI 1371


>gi|436837951|ref|YP_007323167.1| SNF2-related protein [Fibrella aestuarina BUZ 2]
 gi|384069364|emb|CCH02574.1| SNF2-related protein [Fibrella aestuarina BUZ 2]
          Length = 1030

 Score = 80.1 bits (196), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 81/144 (56%), Gaps = 7/144 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASC-LALLMDGS 1051
            K++IFSQF++H+ V++Q L    I++A  Y    S+++ + +  F+ D S  L L+   +
Sbjct: 882  KILIFSQFIKHLAVVKQYLKEKQIRYA--YLDGGSTDRQEQVARFQTDDSVQLFLISLKA 939

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              LG +L+    VFL++P W+ ++E Q + RAHR+G  +P+       + TVEE++L   
Sbjct: 940  GGLGHNLTAADYVFLLDPWWNPAIEAQAVDRAHRIGQQKPVFTYKFITKNTVEEKILAL- 998

Query: 1112 QDTDRCRRLLKEELVKPEREGARS 1135
                R ++ L  ELV  E    +S
Sbjct: 999  ---QRNKQRLASELVTSEESFVKS 1019



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 47/218 (21%), Positives = 99/218 (45%), Gaps = 22/218 (10%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW 675
           +L+V+P+ L+ +W+ + ++      L + V+T   +    +    YD+++T++  +  + 
Sbjct: 623 SLLVMPTSLLYNWELEARRFT--PDLRVLVYTGTYRDKNTAQFDGYDLILTSYGIVRIDI 680

Query: 676 GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN-- 733
              K        +  V++DE   + +  +   +  M   L +++R +LTGTP  N+    
Sbjct: 681 DLLKN-----YRFDYVIMDESQAIKNPNSYITRAVM--QLNSAHRLILTGTPLENSTMDL 733

Query: 734 -SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGR-SRLLQLLHRCMISARKT 791
            +Q++ + P L  L  +++ +N          P E   +E +  +L  L+   M+   K 
Sbjct: 734 WTQMTFINPGL--LGSQSFFRNTYQV------PIEKRNDEQKMQKLYSLIKPFMLRRNKK 785

Query: 792 DLQT-IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL 828
            + T +P  ++ V + + T E   TY E     R  IL
Sbjct: 786 QVATDLPPKVESVLYCDMTAEQEKTYEEAKSYYRNLIL 823


>gi|167519020|ref|XP_001743850.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777812|gb|EDQ91428.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1673

 Score = 80.1 bits (196), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 157/338 (46%), Gaps = 33/338 (9%)

Query: 615  ATLIVVPSY-LVDHWKTQIQQHVR-PGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
            ATLI+ P+  L  HW+ +I  +   P  L       + +    +   DY VVITT + LS
Sbjct: 951  ATLIIAPTLDLARHWEHEIDAYTAGPHVLGRTCMLLNTRVLPETFE-DYGVVITTLHTLS 1009

Query: 673  AEWGRRKKSPMM-QVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPN 730
                      +  Q  W R+++DEGHTLG  +   ++ + AI SL   + W+++GTPTP+
Sbjct: 1010 RVCSLPHHYDLFHQRRWHRIVVDEGHTLGKGVQ--SRAREAIQSLGTDHMWIVSGTPTPD 1067

Query: 731  -TPNSQLSHLQPMLKFLHEEAY--GQNQKAWDGGILRPFEAEMEEGRS-RLLQLLHRCMI 786
               +S +  ++ +L  L E  +  G  +  +   + RPFE  +      RL Q+L RCM+
Sbjct: 1068 LLASSGIDFIRGLLITLREPPFCEGNTRNTFRNLLTRPFERHLATDSVWRLAQMLQRCMV 1127

Query: 787  SARKTD-LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADW--NDPSHVES--L 841
               K + ++ +P  + E   L        +YN L+  +R NI++     N+ S  +   L
Sbjct: 1128 RHSKLETMRNVPRPVCETILLPLQHHEWRSYNTLLSFLRGNIVLTSLVGNEISGKQDSIL 1187

Query: 842  LNPKQWKFRSTTIRNLRLSCCVAGH-----IKVTDAGEDIQETMDVLVENGLDPLSQEYA 896
             +P+  +     + NLR+   +A       ++VTD   +++ET +++   GL    +  A
Sbjct: 1188 ESPRHLR---EAMENLRI---IANGMWLYVVRVTDV--NVRETKEMMEAFGLS-TERIAA 1238

Query: 897  FIKY-NLLNGGNCLRHILCLDCVAMDSEKCSLPGCGFL 933
            F  Y + L  G     ++C  C         LP CG L
Sbjct: 1239 FDTYIHELRAGRT--SVVCQQCHIGVPMLMVLPCCGLL 1274



 Score = 67.0 bits (162), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 3/123 (2%)

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQL-TVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS 1042
            L   + +P K I++S     +     +L +  G K   MY        +  +  FR D  
Sbjct: 1470 LMREQHMPYKAIVYSAQRNTLDNTYFRLRSFFGDKACAMYRS--QQKDVHEIRRFRQDDQ 1527

Query: 1043 CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGT 1102
            C  L +    ++GLDL FVT +FL+E   D+S+E QVI+RA R+G  + +HV+ L M  T
Sbjct: 1528 CAFLCLAQEGAVGLDLHFVTHIFLLEEPVDKSLEAQVIARAWRIGCNQVVHVQKLVMAET 1587

Query: 1103 VEE 1105
            V++
Sbjct: 1588 VDD 1590


>gi|452001084|gb|EMD93544.1| hypothetical protein COCHEDRAFT_1131986 [Cochliobolus heterostrophus
            C5]
          Length = 1234

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            KVI+FSQF   + +IE  L  AG  F      M +  +  SL   R D     LL     
Sbjct: 1021 KVIVFSQFTSMLDLIEPFLNRAGYNFTRYDGSMRNDLREASLHKLREDKRTRVLLCSLKC 1080

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV +MEP W+  +EEQ I R HR+  T  + V  L++  +VEE+++E L
Sbjct: 1081 GSLGLNLTAASRVVIMEPFWNPFVEEQAIDRVHRLNQTVDVTVYRLSIHNSVEERIIE-L 1139

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 1140 QEAKR 1144



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 30/207 (14%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           + TL+V P  L+  W+++I   V +   L + V     +  +      YDVVITT+  L+
Sbjct: 450 KGTLVVAPLALIKQWESEINSKVTKSHALKVLVHHGPNRTKSADKLKQYDVVITTYQVLA 509

Query: 673 AEWGRRKKSP------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTG 725
           +E       P         V+W R+MLDE HT+    N   K+  A  ++ +  RW LTG
Sbjct: 510 SEHASCGDGPDGLKKGCFAVNWYRMMLDEAHTIK---NRNAKMTKACYAVNSHYRWCLTG 566

Query: 726 TPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLL 781
           TP  N     +  LQ +++FL  + Y +   +W   I  P    M+ GR  L    LQ+ 
Sbjct: 567 TPMQNN----IDELQSLIRFLRIQPYCE-LSSWKDSISGP----MKNGRGNLAMKRLQVF 617

Query: 782 HRCMISARKTDLQTIPLCIKEVTFLNF 808
            R  +  R  D+      +K+   LNF
Sbjct: 618 LRAFMKRRTKDV------LKKEGGLNF 638


>gi|395327209|gb|EJF59610.1| hypothetical protein DICSQDRAFT_64742 [Dichomitus squalens LYAD-421
            SS1]
          Length = 653

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 2/127 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K IIFSQF   + +IE  L   GIKF      M+ + +  SL+      S   +L+   
Sbjct: 490  EKTIIFSQFTSMLDLIEPFLKSEGIKFVRYDGSMNKAARDDSLERISKSKSTKVILISFK 549

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S GL+L+    V L++P W+ ++E+Q   RAHR G  RP+++  L++  +VE+++LE 
Sbjct: 550  AGSTGLNLTCCNNVILVDPWWNPALEDQAFDRAHRFGQERPVNIHKLSVPDSVEQRILE- 608

Query: 1111 LQDTDRC 1117
            LQ+  R 
Sbjct: 609  LQEKKRA 615



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 48/223 (21%), Positives = 94/223 (42%), Gaps = 59/223 (26%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD---VVITTFN 669
           S +TL+V P  LV  W ++++++    ++       H  PS  +  ++ +   +V+T+++
Sbjct: 96  SGSTLVVCPVALVSQWASEVKKYTSGLRV-----VQHHGPSRTTDPYELERAHIVVTSYS 150

Query: 670 RLSAEWGR------------------------------------------RKKSPMMQVH 687
            +++E+G                                           ++K  + +V 
Sbjct: 151 VVTSEYGAFAPAKNEGKGKGKGKKATVQDSDSDEDSDDFSKRLKSTARRGKQKDALFRVK 210

Query: 688 WLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           W RV+LDE H +    N T K  +A  +L A  RW LTGTP  N+    +  +  ++KFL
Sbjct: 211 WWRVVLDEAHNIK---NRTTKSAIACCALDAKYRWCLTGTPMQNS----VDEIYSLIKFL 263

Query: 747 HEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISAR 789
                  +   ++  I +P +A       + LQ++ R ++  R
Sbjct: 264 RISPL-NDWGTFNTSIAKPVKAGKPVRALKRLQVVLRAIMLRR 305


>gi|384486246|gb|EIE78426.1| hypothetical protein RO3G_03130 [Rhizopus delemar RA 99-880]
          Length = 807

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 2/128 (1%)

Query: 985  ESNKALP-DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASC 1043
            E+ +  P +K IIFSQF   + +++  L+  G  +      M +  + +SL   R+D +C
Sbjct: 646  ETREKYPNEKTIIFSQFTSMLDLLDIPLSQHGFTYCRYDGSMSAQERERSLLSLRYDQNC 705

Query: 1044 LALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGT 1102
              +L+     SLGL+L+   RV LM+  W+ ++EEQ I R HR+G   P++V  L +  T
Sbjct: 706  TVMLISLKCGSLGLNLTAANRVILMDIWWNPALEEQAIDRVHRIGQRLPVYVTRLMIDNT 765

Query: 1103 VEEQMLEF 1110
            VEE++++ 
Sbjct: 766  VEEKIIKL 773



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 20/146 (13%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           R TLIV P  L+  W  +I+     G   + +     +    +   +YDVVITT+  ++ 
Sbjct: 313 RRTLIVTPLALIQQWADEIKSKTEKGAFKVLIHHGPNRTRDPNKLKNYDVVITTYQVVAG 372

Query: 674 EW--GRRKK----------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS-LTASNR 720
           +    + KK           P+ Q+ W RV+LDE   +    N T +  ++ S L ++ R
Sbjct: 373 DMPSDQEKKDQEVVVNEEFGPLFQITWYRVVLDEAQQIK---NRTTRSSVSCSALLSTKR 429

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFL 746
           W LTGTP  N     +  L  +L+FL
Sbjct: 430 WCLTGTPIQNN----VDELYSLLRFL 451


>gi|121700232|ref|XP_001268381.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus
           clavatus NRRL 1]
 gi|119396523|gb|EAW06955.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus
           clavatus NRRL 1]
          Length = 1253

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 48/244 (19%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAW----DYDVVITTFN 669
           R TLI+ P  L+  WK +IQ+ V+PG+  L V+  H +    ++ W    ++DVV+TTF 
Sbjct: 599 RPTLIIAPVSLMQQWKREIQKAVKPGRHQLSVYVLHGE--KRTVGWRDLKNHDVVLTTFG 656

Query: 670 RLSAEWGRRKKSPMMQ-----------------------VHWLRVMLDEGHTLGSSLNLT 706
            LS+E  RR+K   +Q                         W RV++DE   +    N  
Sbjct: 657 TLSSELKRREKYDELQGSGANNEASCRTLAKSLPCLGPGSTWYRVIIDEAQCIK---NRR 713

Query: 707 NKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRP 765
            K  +A   L ++ RW ++GTP  N+    +  LQ +L+FL    Y    + ++     P
Sbjct: 714 TKSALACCRLNSTYRWCMSGTPMMNS----VEELQSLLRFLQIRPYSSIDR-FNKDFTTP 768

Query: 766 FEAEMEEGRSRL---LQLLHRCMISAR----KTDLQTI---PLCIKEVTFLNFTEEHAGT 815
            ++  EE R +    LQ+L + ++  R    K D + I   P  + E     F+E+    
Sbjct: 769 LKSGNEEMRGKAMKQLQVLLKAVLLRRTKTSKIDGKPILELPPRVSEKVHAVFSEDEQAL 828

Query: 816 YNEL 819
           YN L
Sbjct: 829 YNAL 832



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 2/131 (1%)

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
            N+   +K IIFSQF   + ++E  +   G  +      M  +++  ++  F  +A C  +
Sbjct: 1094 NRDDSEKTIIFSQFTSLLDLLEVPIARRGWGYRRYDGSMKPADRNSAVLDFTDNADCKIM 1153

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            L+   + + GL+L   ++V + +P W+  +EEQ I RAHR+G  R + +  + ++ TVE+
Sbjct: 1154 LVSLKAGNSGLNLVAASQVIIFDPFWNPYIEEQAIDRAHRIGQRREVQIHRVLVQKTVED 1213

Query: 1106 QMLEFLQDTDR 1116
            ++LE LQD  R
Sbjct: 1214 RILE-LQDKKR 1223


>gi|154274738|ref|XP_001538220.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150414660|gb|EDN10022.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 996

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 18/189 (9%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TL+V P  L+  W+++I   V    +L + ++   ++         +DVVITT+  
Sbjct: 325 VGKGTLVVAPLALIKQWESEIGSKVEASHRLRVCIYHGTQRTKHADTLSQFDVVITTYGT 384

Query: 671 LSAEWGRRKKSPM--MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           LS+E    +K P      HW RV+LDE HT+ +        Q A +L +  RW LTGTP 
Sbjct: 385 LSSEHAVSEKKPTGCFANHWYRVILDEAHTIKN--RNAKATQAACALKSEYRWCLTGTPM 442

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRC 784
            N     L  LQ ++ FL  + Y  +  AW   I +P    +  GR     R LQ+  + 
Sbjct: 443 QNN----LDELQSLINFLRIKPY-NDLAAWREQITKP----LNNGRGGLAIRRLQVYLKA 493

Query: 785 MISARKTDL 793
            +  R  D+
Sbjct: 494 FMKRRTKDI 502


>gi|320032945|gb|EFW14895.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira]
          Length = 1057

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 11/161 (6%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           ++ TL+V P   V +W +QI++H++ G +  +V+    +    +    YD+VITT++ + 
Sbjct: 477 AKTTLLVSPLSAVSNWTSQIKEHLQEGAISYYVFHGPSRTEDPAELAKYDLVITTYSTVL 536

Query: 673 AEWGR----RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           ++  R    R  SP+ Q+++ R++LDE H +       +  Q   SL A  RW +TGTP 
Sbjct: 537 SDLARKSSKRGASPLAQLNFFRIVLDEAHAIREQSGAQS--QAIFSLNAQRRWSVTGTPI 594

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE 769
            N    +L  L  + KFL    Y +  + +   I+ PF+ E
Sbjct: 595 QN----RLEDLGSVTKFLRLYPYNEKGR-FAAHIISPFKCE 630



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 6/139 (4%)

Query: 984  LESNKALPD----KVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDMFR 1038
            +E +K  PD    K ++FS +  H+ +IE  L   GI+ F  +   M    +  +LD FR
Sbjct: 890  VEESKHKPDQPPIKSVVFSSWTSHLDLIEIALQDNGIRGFTRLDGTMALKQRNVALDKFR 949

Query: 1039 HDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
             D +   LL   G+  +GL+L+  +RV++MEP ++ +   Q + R HR+G TR +     
Sbjct: 950  DDENITVLLATLGAGGVGLNLTSASRVYIMEPQYNPAAVAQAVDRVHRLGQTREVTTVQF 1009

Query: 1098 AMRGTVEEQMLEFLQDTDR 1116
             M+ ++EE++ E  +   +
Sbjct: 1010 IMKESIEEKIAELAKKKQK 1028


>gi|303322649|ref|XP_003071316.1| SNF2 family N-terminal domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240111018|gb|EER29171.1| SNF2 family N-terminal domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 1057

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 11/161 (6%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           ++ TL+V P   V +W +QI++H++ G +  +V+    +    +    YD+VITT++ + 
Sbjct: 477 AKTTLLVSPLSAVSNWTSQIKEHLQEGAISYYVFHGPSRTEDPAELAKYDLVITTYSTVL 536

Query: 673 AEWGR----RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           ++  R    R  SP+ Q+++ R++LDE H +       +  Q   SL A  RW +TGTP 
Sbjct: 537 SDLARKSSKRGASPLAQLNFFRIVLDEAHAIREQSGAQS--QAIFSLNAQRRWSVTGTPI 594

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE 769
            N    +L  L  + KFL    Y +  + +   I+ PF+ E
Sbjct: 595 QN----RLEDLGSVTKFLRLYPYNEKGR-FAAHIISPFKCE 630



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 6/139 (4%)

Query: 984  LESNKALPD----KVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDMFR 1038
            +E +K  PD    K ++FS +  H+ +IE  L   GI+ F  +   M    +  +LD FR
Sbjct: 890  VEESKHKPDQPPIKSVVFSSWTSHLDLIEIALQDNGIRGFTRLDGTMALKQRNVALDKFR 949

Query: 1039 HDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
             D +   LL   G+  +GL+L+  +RV++MEP ++ +   Q + R HR+G TR +     
Sbjct: 950  DDENITVLLATLGAGGVGLNLTSASRVYIMEPQYNPAAVAQAVDRVHRLGQTREVTTVQF 1009

Query: 1098 AMRGTVEEQMLEFLQDTDR 1116
             M+ ++EE++ E  +   +
Sbjct: 1010 IMKESIEEKIAELAKKKQK 1028


>gi|119189989|ref|XP_001245601.1| hypothetical protein CIMG_05042 [Coccidioides immitis RS]
 gi|392868502|gb|EAS34298.2| SNF2 family helicase/ATPase [Coccidioides immitis RS]
          Length = 1056

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 11/161 (6%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           ++ TL+V P   V +W +QI++H++ G +  +V+    +    +    YD+VITT++ + 
Sbjct: 476 AKTTLLVSPLSAVSNWTSQIKEHLQEGAISYYVFHGPSRTEDPAELAKYDLVITTYSTVL 535

Query: 673 AEWGR----RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           ++  R    R  SP+ Q+++ R++LDE H +       +  Q   SL A  RW +TGTP 
Sbjct: 536 SDLARKSSKRGASPLAQLNFFRIVLDEAHAIREQSGAQS--QAIFSLNAQRRWSVTGTPI 593

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE 769
            N    +L  L  + KFL    Y +  + +   I+ PF+ E
Sbjct: 594 QN----RLEDLGSVTKFLRLYPYNEKGR-FAAHIISPFKCE 629



 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 69/128 (53%), Gaps = 2/128 (1%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            P K ++FS +  H+ +IE  L   GI+ F  +   M    +  +LD FR D +   LL  
Sbjct: 900  PIKSVVFSSWTSHLDLIEIALQDNGIRGFTRLDGTMALKQRNVALDKFRDDDNITVLLAT 959

Query: 1050 -GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             G+  +GL+L+  +RV++MEP ++ +   Q + R HR+G TR +      M+ ++EE++ 
Sbjct: 960  LGAGGVGLNLTSASRVYIMEPQYNPAAVAQAVDRVHRLGQTREVTTVQFIMKESIEEKIA 1019

Query: 1109 EFLQDTDR 1116
            E  +   +
Sbjct: 1020 ELAKKKQK 1027


>gi|440716061|ref|ZP_20896580.1| helicase, SNF2/RAD54 family [Rhodopirellula baltica SWK14]
 gi|436439007|gb|ELP32506.1| helicase, SNF2/RAD54 family [Rhodopirellula baltica SWK14]
          Length = 1381

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 11/146 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            KV++FSQF+ H+H++  +L    I +  +     +  +  S+D F+     + L+   + 
Sbjct: 1233 KVLVFSQFVGHLHLLRDRLDERKISYQYLDGSTPAKKRKTSVDAFQDGEGDVFLISLKAG 1292

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE--- 1109
             +GL+L+    V  M+P W+ ++E+Q   RAHRMG  RP+ V      GT+EE++L+   
Sbjct: 1293 GVGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQQRPVTVYRFITTGTIEERILQLHE 1352

Query: 1110 --------FLQDTDRCRRLLKEELVK 1127
                     L+ T+   +L  EEL+K
Sbjct: 1353 SKRDLADSLLEGTESSAKLSAEELMK 1378



 Score = 43.9 bits (102), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 123/301 (40%), Gaps = 37/301 (12%)

Query: 599  LALCEPLDSVRLYLSRA----TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA 654
            + L + L  + + L+R      L+V P+ +  +W ++I +     +  LF   D ++   
Sbjct: 956  MGLGKTLQCLAVLLNRGKSGPALVVAPTSVAANWVSEIARFAPSLRPILFSEAD-RETVI 1014

Query: 655  HSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
             SL    D++I ++  L+ E  +     +    W  ++LDE   + ++   T + + A+ 
Sbjct: 1015 ESLG-KRDLLICSYGLLANEAEK-----LQSRRWQTLVLDEAQAIKNAD--TKRSEAAMG 1066

Query: 715  LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGR 774
            L A  R +LTGTP  N     L  L  + +F++    G ++ ++      P E +     
Sbjct: 1067 LEADFRVVLTGTPMEN----HLGELWNLFQFINPGLLGSSE-SFQERFAIPIERDHRRDV 1121

Query: 775  SRLLQLLHRCMISARKTD--LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
             R L+ L    I  R     L  +P   +    +   E+ A  Y  +     +N+  +D 
Sbjct: 1122 QRQLKQLIAPFILRRTKSQVLDELPPRTEITVPIELGEDEAAMYEAMRRKALQNLEDSDD 1181

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAG------EDIQETMDVLVEN 886
            + P H++ L            +  LR  CC    +   DAG      E   +T+  L+E 
Sbjct: 1182 DRPVHIKIL----------AELMRLRRFCCHPDLVD-PDAGLKAAKLERFTDTVTDLIEG 1230

Query: 887  G 887
            G
Sbjct: 1231 G 1231


>gi|32475836|ref|NP_868830.1| SWF/SNF family helicase [Rhodopirellula baltica SH 1]
 gi|32446379|emb|CAD76207.1| probable swi/snf family helicase 2 [Rhodopirellula baltica SH 1]
          Length = 1386

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 11/146 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            KV++FSQF+ H+H++  +L    I +  +     +  +  S+D F+     + L+   + 
Sbjct: 1238 KVLVFSQFVGHLHLLRDRLDERKISYQYLDGSTPAKKRKTSVDAFQDGEGDVFLISLKAG 1297

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE--- 1109
             +GL+L+    V  M+P W+ ++E+Q   RAHRMG  RP+ V      GT+EE++L+   
Sbjct: 1298 GVGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQQRPVTVYRFITTGTIEERILQLHE 1357

Query: 1110 --------FLQDTDRCRRLLKEELVK 1127
                     L+ T+   +L  EEL+K
Sbjct: 1358 SKRDLADSLLEGTESSAKLSAEELMK 1383



 Score = 43.5 bits (101), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 123/301 (40%), Gaps = 37/301 (12%)

Query: 599  LALCEPLDSVRLYLSRA----TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA 654
            + L + L  + + L+R      L+V P+ +  +W ++I +     +  LF   D ++   
Sbjct: 961  MGLGKTLQCLAVLLNRGKSGPALVVAPTSVAANWVSEIARFAPSLRPILFSEAD-RETVI 1019

Query: 655  HSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
             SL    D++I ++  L+ E  +     +    W  ++LDE   + ++   T + + A+ 
Sbjct: 1020 ESLG-KRDLLICSYGLLANEAEK-----LQSRRWQTLVLDEAQAIKNAD--TKRSEAAMG 1071

Query: 715  LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGR 774
            L A  R +LTGTP  N     L  L  + +F++    G ++ ++      P E +     
Sbjct: 1072 LEADFRVVLTGTPMEN----HLGELWNLFQFINPGLLGSSE-SFQERFAIPIERDHRRDV 1126

Query: 775  SRLLQLLHRCMISARKTD--LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
             R L+ L    I  R     L  +P   +    +   E+ A  Y  +     +N+  +D 
Sbjct: 1127 QRQLKQLIAPFILRRTKSQVLDELPPRTEITVPIELGEDEAAMYEAMRRKALQNLEDSDD 1186

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAG------EDIQETMDVLVEN 886
            + P H++ L            +  LR  CC    +   DAG      E   +T+  L+E 
Sbjct: 1187 DRPVHIKIL----------AELMRLRRFCCHPDLVD-PDAGLKAAKLERFTDTVTDLIEG 1235

Query: 887  G 887
            G
Sbjct: 1236 G 1236


>gi|393245612|gb|EJD53122.1| hypothetical protein AURDEDRAFT_81353 [Auricularia delicata
           TFB-10046 SS5]
          Length = 1040

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 123/298 (41%), Gaps = 76/298 (25%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWT--DHKKPSAHSLAWDYDVVIT 666
           + +L+ ATL +VP  L   W ++I++H   G L  F  +  D+  P A  LA  YD+V+ 
Sbjct: 293 KYFLTSATLAIVPVTLFRQWNSEIEKHCEAGALRCFASSSRDNIVPCASQLASQYDLVLL 352

Query: 667 TFNRLSAEWGRRKKS------------------------------PMMQVHWLRVMLDEG 696
           T  R SAE    + S                              P+ Q HW R+++DEG
Sbjct: 353 THERFSAELRSAQNSDKPNTWSACSCPLIPGTEVPDCTCRPANLTPLQQCHWKRIVIDEG 412

Query: 697 HTLGSSLNLTNKL-QMAISLTASNRWLLTGTPTPN------------------------- 730
           H+L    N T+ L  +A  L +   W+++GTPT N                         
Sbjct: 413 HSLS---NHTSYLASLADLLRSDAVWIVSGTPTTNLIGTGFSEAGTGQDDFYSAPAEADA 469

Query: 731 -------TPNSQLSHLQPML-KFLHEEAYGQ--NQKAWDGGILRPFEAEMEEGRSRLL-Q 779
                     + L+ L+ +L  FLH     Q    + +   I  PF      G +R++ Q
Sbjct: 470 DVRSERARERADLAKLEALLVHFLHLPQITQEAGSRFFRAHIAAPF-LRSAWGAARVVEQ 528

Query: 780 LLHRCMISARKTDLQ---TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWND 834
           ++ +CM+  R  D++    +P   KEV  L+     A TYN ++  V  N + ++  D
Sbjct: 529 MMRQCMVRHRIEDIEAEVALPPATKEVVMLDLHPLAAMTYNTILALVAGNAIDSERRD 586



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 4/131 (3%)

Query: 979  LYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR 1038
            + R  LE N    DK +IFS     +  + + L++A I    + S +  +        F+
Sbjct: 834  VLREVLEHNT---DKFLIFSNSPLSLAHMGEALSLARISHLKIMSEVDPAKWSTHAMTFQ 890

Query: 1039 HDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
             D SC  LLM+    + GL+L+   R+  +EP+W    E Q I RAHR+G   PI ++ L
Sbjct: 891  SDDSCQCLLMELKYGARGLNLTRANRIIFLEPVWRADEESQAIKRAHRIGQVNPISIKIL 950

Query: 1098 AMRGTVEEQML 1108
            A+R TVEE M+
Sbjct: 951  AVRETVEEAMI 961



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDL-ATEDGFYFYVNTVSGDIATGTAPTMRDFH 225
           L+ +Q+  +  M  +E +  V+  P Y+ + + E G  FY+   +  +     P      
Sbjct: 84  LYRYQKETLRRMHQQEMDGRVIPDPTYLAVHSIETGTTFYLQPSTMTVRRAV-PVFSQKR 142

Query: 226 GGMFCDEPGLGKTITALSLILKTQGTLADP 255
            G+ C++ G GKT+  L+LIL T+GTL +P
Sbjct: 143 SGILCEDMGSGKTVVLLALILATKGTLPEP 172


>gi|345782768|ref|XP_003432324.1| PREDICTED: transcription termination factor 2 [Canis lupus
           familiaris]
          Length = 1148

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 23/157 (14%)

Query: 606 DSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVI 665
           D  R + SR TLI+ P+ L+ HWK ++ + V    L + ++    +     +   YD+VI
Sbjct: 618 DDSREFTSRGTLIICPASLIHHWKNEVMKRVSSNTLRVCLYHGPNRDQRAKVLSTYDIVI 677

Query: 666 TTFNRLSAEWGRRK---------------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQ 710
           TT+N L+ E   +K               K+P++++ W R++LDE H +    N   +  
Sbjct: 678 TTYNLLAKEIPTQKEEGAIPGANPNIDIAKTPLLRIVWARIILDEAHCV---RNPRVQTS 734

Query: 711 MAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           MA+  L A  RW +TGTP  NT    L  +  +LKFL
Sbjct: 735 MAVCKLQAHARWAVTGTPIQNT----LLDMYSLLKFL 767



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K +I SQ+   + ++   L   G+ +A +   +    ++  ++ F    S   +L+  SA
Sbjct: 997  KSVIVSQWTSMLQIVAWHLKKRGLTYATINGSVRPKQRMDLVEAFNSSRSPQVMLISLSA 1056

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+    +FL++  W+ S+E+Q   R +R+G  + + V      GTVEE++L  
Sbjct: 1057 GGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVVHKFICEGTVEEKILHL 1115


>gi|154303593|ref|XP_001552203.1| hypothetical protein BC1G_08681 [Botryotinia fuckeliana B05.10]
          Length = 274

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            KV+IFSQ+   ++++++QL  AGIKFA +   M +  + K ++    D  C  LL     
Sbjct: 120  KVVIFSQWTSFLNIVQKQLEQAGIKFARIDGSMTAPQRDKGMNSLESDPECRILLASLAV 179

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             S+GL+L     V L +  W  ++E+Q + R HR+G  R   V  L M G++EE++LE 
Sbjct: 180  CSVGLNLVAADTVILADSWWAPAIEDQAVDRVHRLGQKRECKVWRLVMEGSIEERVLEI 238


>gi|225682607|gb|EEH20891.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 1275

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 72/119 (60%), Gaps = 2/119 (1%)

Query: 992  DKVIIFSQFLEHIH-VIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            +K+IIF +   +    I + L + G++F    + + +S++   L +F        LLMD 
Sbjct: 941  EKIIIFYEEGGNSGWYIAEALEILGVEFRIYSNTLKTSDRSAYLALFNTTELVRVLLMDL 1000

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              AS GLD+   +RVF++ PIWD ++E Q I RAHR+   +P++VETL ++ T+E++ML
Sbjct: 1001 RQASHGLDIPCASRVFIVNPIWDPNVESQAIKRAHRISQGKPVYVETLVLKNTLEDKML 1059



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 16/134 (11%)

Query: 607 SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK---PSAHSLAWDYDV 663
           + +L L   TL+VVPS LVDHW  +I +H +   L + V  D ++   P  H L  +YDV
Sbjct: 433 ATKLQLCSGTLVVVPSNLVDHWLNEINKHTQ--GLKVLVLRDSRRATPPPNHLL--EYDV 488

Query: 664 VITTFNRLSAEWGRRKK---------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
           V+ +  R   E G R +         SP+  +HWLR+++DEGH        +  +     
Sbjct: 489 VLFSRPRFEREAGGRTETSPSKLPYESPLKSLHWLRIIVDEGHNFAIKGGKSTAVHTLGQ 548

Query: 715 LTASNRWLLTGTPT 728
           L    RW+++GTP+
Sbjct: 549 LHVERRWVVSGTPS 562


>gi|388579084|gb|EIM19413.1| hypothetical protein WALSEDRAFT_49106 [Wallemia sebi CBS 633.66]
          Length = 790

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 84/155 (54%), Gaps = 5/155 (3%)

Query: 957  DLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGI 1016
            D  E+ P+ +   + +T +++   +P+     A  +K IIFSQF   + +IE+ +  AG 
Sbjct: 599  DEDEVIPTLKATESKSTSVRKKGPKPD----SANAEKTIIFSQFTTFLDIIERFVKHAGY 654

Query: 1017 KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSM 1075
            K+      ++ + +   LD  R D     +L+   A S GL+L+  +RV L +  W+ ++
Sbjct: 655  KYVRYDGTLNPTERGAVLDRIRSDDKTTVILISFKAGSTGLNLNVCSRVILADMWWNPAL 714

Query: 1076 EEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            E+Q   RAHR+G  R +H+  L +  TVE+++LE 
Sbjct: 715  EDQAFDRAHRLGQKREVHIYKLTVGQTVEDRILEL 749



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 133/337 (39%), Gaps = 78/337 (23%)

Query: 575 EKGITRWYYPKTLDNLAFDLAALRLALC---EPLDSVRLYLSRATLIVVPSYLVDHWKTQ 631
           E G+   Y     D++        LA+    +P +  R    + TLIV P  +V  W+++
Sbjct: 111 ESGVKNKYGGILADDMGLGKTIQTLAVIIGNKPSEETRKNYGKTTLIVAPLAVVSQWESE 170

Query: 632 IQQHVRPGQLHLFVWTDHKKPSAHSLAW---DYDVVITTFNRLSAE---W---------- 675
            +        ++ V T H  PS    A    DYD+V+T++  +S+E   W          
Sbjct: 171 AKSKCD----NIRVLT-HHGPSRTRDATKFKDYDIVVTSYQIVSSEHKVWQEQGENTNKK 225

Query: 676 ---------GRRKKSPM---MQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWL 722
                     +  K P+    + ++ R++LDE   +      T+K+ +A  +L A  RW 
Sbjct: 226 EDKDGFVKKTKSTKKPLCALFETNFYRIVLDEAQNIKGK---TSKMSLACAALNARLRWC 282

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWD---GGILRPFEAEMEEGRSRL-- 777
           LTGTP  N     +  L  +L+FL  + +      WD     I+ P +     GR ++  
Sbjct: 283 LTGTPIQNN----VDELYALLRFLKIQPFSD----WDEFKARIVVPLKG----GRVKVAI 330

Query: 778 --------LQLLHRCMISARKTDLQTIPLCIKEVTFL--NFTEEHAGTYNELVVTVRRNI 827
                   L +L R   SA +     + L  K +  +  +F +E    Y  +     + I
Sbjct: 331 QRLQVILKLIMLRRTKASANEDGTPLLKLPAKHILDISCDFDKEERQFYENVHNRAEQQI 390

Query: 828 --LMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
              + D N  S   S+L         T +  LR +CC
Sbjct: 391 SKFVTDGNINSRYTSVL---------TMLLRLRQACC 418


>gi|301776436|ref|XP_002923633.1| PREDICTED: transcription termination factor 2-like [Ailuropoda
           melanoleuca]
 gi|281337997|gb|EFB13581.1| hypothetical protein PANDA_012813 [Ailuropoda melanoleuca]
          Length = 1157

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 25/154 (16%)

Query: 611 YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + SR TLI+ P+ L+ HWK ++ + V    L + ++    +     +   YD+VITT+N 
Sbjct: 631 FTSRGTLIICPASLIHHWKNEVMKRVSNNTLRVCLYHGPNRDQRAKVLSSYDIVITTYNL 690

Query: 671 LSAEWGRRK-----------------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI 713
           L+ E   +K                 K+P++Q+ W R++LDE H +    N   +  MA+
Sbjct: 691 LAKEIPTQKGEGVIPGANRSVEKDSAKTPLLQIVWARIILDEAHCV---RNPRVQTSMAV 747

Query: 714 -SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
            SL A  RW +TGTP  NT    L  +  +LKFL
Sbjct: 748 CSLQARARWAVTGTPIQNT----LLDMYSLLKFL 777



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++ SQ+   + V+   L   G+ FA +   ++   ++  ++ F        +L+  SA
Sbjct: 1006 KSVVVSQWTSMLQVVAWHLKRHGLTFATIDGSVNPKQRMDLVEAFNSSRGPQVMLISLSA 1065

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+    +FL++  W+ S+E+Q   R +R+G  + + V      GTVEE++L  
Sbjct: 1066 GGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVVHKFICEGTVEEKILHL 1124


>gi|348587112|ref|XP_003479312.1| PREDICTED: transcription termination factor 2-like [Cavia
           porcellus]
          Length = 1148

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 29/156 (18%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           +Y S  TLIV P+ L+ HWK ++++ V   +L ++++    +     +   YD+VITT++
Sbjct: 624 VYTSHGTLIVCPASLIHHWKNEVEKRVNSSKLKIYLYHGPNRNQHAKILSTYDIVITTYS 683

Query: 670 RLSAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAI 713
            L+ E   +K+               +P++Q+ W R++LDE H      N+ N ++Q +I
Sbjct: 684 LLAKEIPTKKQEKDVPGANLSVEGFSTPLLQIVWARIILDEAH------NVKNPRVQTSI 737

Query: 714 S---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           +   L A  RW +TGTP  N     L  +  +LKFL
Sbjct: 738 AVCKLQARARWAVTGTPIQNN----LLDMYSLLKFL 769



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-S 1051
            K +I SQ+   + V+   L   G+ +A +   ++   ++  ++ F H      +L+   +
Sbjct: 997  KSVIVSQWTSMLKVVALHLKKQGLTYATIDGSVNPKQRMDLVEAFNHSGDPQIMLISLLA 1056

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L     +FL++  W+ S+E+Q   R +R+G  R + +     +GTVEE++L+ 
Sbjct: 1057 GGVGLNLIGGNHLFLLDMHWNPSLEDQACDRIYRVGQQRDVVIHRFVCKGTVEEKILQL 1115


>gi|344300954|gb|EGW31266.1| hypothetical protein SPAPADRAFT_67342 [Spathaspora passalidarum NRRL
            Y-27907]
          Length = 1121

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 24/196 (12%)

Query: 936  MQSPEI-LTRPENPNPK--WPVPQDLIELQPSYRQWSNTNTFLKQDLYR----------- 981
            M  P+I L+ P+   PK  +  P++ +E +  +  + N N  +  D  R           
Sbjct: 878  MDIPDIALSTPKKSRPKKEFSSPKEELEREVGHLNYHNHNETVSYDKIRRAKVLGTASAK 937

Query: 982  -----PNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDM 1036
                   L  ++    K ++F +F +  + + + L + GI +    + +  + + K+L  
Sbjct: 938  LSYLVSRLLDHQETKIKSLVFFEFEDSAYYLTEALDILGINYILYATSITPAQRAKNLVE 997

Query: 1037 F-RHDASC---LALLMDGS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRP 1091
            F  HD      L+L+MD   A+ GL +   TRV+ + P+W +S+E Q I RAHR+G T+ 
Sbjct: 998  FANHDVEVDGGLSLIMDLRLAAHGLTILSATRVYFISPVWSQSIEAQAIKRAHRIGQTKD 1057

Query: 1092 IHVETLAMRGTVEEQM 1107
            ++VETL ++GT+EE++
Sbjct: 1058 VYVETLILKGTLEEEI 1073



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 57/285 (20%), Positives = 104/285 (36%), Gaps = 54/285 (18%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH---KKPSAHSLAWDYDVVI 665
           +LYL   TL++VP  L   W  +  +H+ PG L +   +++   K+P + +   D+  + 
Sbjct: 442 KLYLCSTTLVIVPDNLFIQWNEETNKHLEPGYLKILFISNYYKMKQPDSCNTYSDFIPL- 500

Query: 666 TTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQ---MAISLTASNRWL 722
                           P + + +  ++L       S  N +N L    +A SL A  +W 
Sbjct: 501 ---------------EPTILIQYDLILLSRTIFARSVDNDSNPLASSFLARSLFAERKWA 545

Query: 723 LTGTPTPNTPNSQLSHLQP--------------------------MLKFLHEEAYGQNQK 756
           +TGTPT       +  L+                           +  FL  E +    K
Sbjct: 546 VTGTPTSGLTRLYMDELEQHQARKSKYVVKNSFNEKADLQKLGIIIGNFLKLEPFASQPK 605

Query: 757 AWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQT---IPLCIKEVTFLNFTEEHA 813
            W+  I++P  A           LLH  M+     D++    +P    +  FL  +  + 
Sbjct: 606 LWNSQIIQPLLANYYGSELLFSNLLHSIMVRHNPRDVEQDLELPPLHHDAVFLEPSYHNI 665

Query: 814 GTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLR 858
            + N     +  N + ++  D   V+ + +P         I NL+
Sbjct: 666 MSINLFTAVLAVNAVTSERTD---VDYMFHPSNRSQLRKLITNLQ 707


>gi|392595468|gb|EIW84791.1| hypothetical protein CONPUDRAFT_116969 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 1266

 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 29/149 (19%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           +YLS ATL+VVPS L+  W  ++ +H      +  +    + PSA  LA  YDV ++   
Sbjct: 331 MYLSSATLVVVPSNLLRQWDREVLKHCTSDVKYKLLRIKDRMPSAQELASQYDVSLSGLR 390

Query: 670 RLSAEW---------------------------GRRKKSPMMQVHWLRVMLDEGHTLGSS 702
           R S                              GR   SP++QV W R+++DEGHT G+ 
Sbjct: 391 RESTRTNVESLFTAQPCTCPFIPGSRVPDCRCPGRPDASPLLQVRWKRLVIDEGHTSGNI 450

Query: 703 LNLTNKLQMAISLTASNRWLLTGTPTPNT 731
            +  N+    +S+    +W++TGTPT NT
Sbjct: 451 EHTINRFIPTMSI--ERKWIVTGTPTANT 477



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 1/122 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K +IFS     +  + + L++  +KF    + +    +   +  F    +    LM+  
Sbjct: 918  EKFLIFSSSPLTLAHVAEGLSLIEVKFLRYTTEIMRDKRDDFVMTFETSDTFRVFLMELK 977

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             A+ GL+L   +R+   EP+W   +E Q I RAHRMG TRPI V+TLA+R T E++M++ 
Sbjct: 978  HAARGLNLISASRIIFCEPVWQPDVESQAIKRAHRMGQTRPIVVKTLAIRSTAEQEMMDR 1037

Query: 1111 LQ 1112
             Q
Sbjct: 1038 RQ 1039



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           ++  L+ +Q+ +V  M+ +E + +V+  PLY+ + +  G   ++   + ++     P + 
Sbjct: 131 LRSSLYNYQRRSVAMMIEKEASHQVVPDPLYVKMPSMRGQDMFLQPTTMEVLR-ECPNIA 189

Query: 223 DFHGGMFCDEPGLGKTITALSLILKTQGTLADPPD 257
              GG+ C+E G GKT+  L+LIL T     DP D
Sbjct: 190 PVRGGILCEELGTGKTVMVLALILATIEERPDPED 224


>gi|77361962|ref|YP_341536.1| helicase [Pseudoalteromonas haloplanktis TAC125]
 gi|76876873|emb|CAI89090.1| putative protein with helicase domain [Pseudoalteromonas haloplanktis
            TAC125]
          Length = 1351

 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 71/118 (60%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            + +IFSQF++ + ++EQ+L   GI +  +   M S+ + + +D F+   + L L+   + 
Sbjct: 1201 QALIFSQFVDVLKLVEQRLKKRGIAYCYLDGSMSSNKRKQQVDKFQAGEAPLFLISLKAG 1260

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+    V  ++P W+ ++E+Q   RAHR+G TRP+ V  L  + T+EE++L+ 
Sbjct: 1261 GTGLNLTAADYVLHLDPWWNPAVEQQASDRAHRLGQTRPVTVYRLIAQNTIEEKILQL 1318


>gi|325096129|gb|EGC49439.1| ATP-dependent helicase RIS1 [Ajellomyces capsulatus H88]
          Length = 1052

 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 18/189 (9%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TL+V P  L+  W+++I   V    +L + ++   ++         +DVVITT+  
Sbjct: 325 VGKGTLVVAPLALIKQWESEIGSKVEASHRLRVCIYHGTQRTKHADTLSQFDVVITTYGT 384

Query: 671 LSAEWGRRKKSPM--MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           LS+E    +K P      HW R++LDE HT+ +        Q A +L +  RW LTGTP 
Sbjct: 385 LSSEHAASEKKPTGCFANHWYRIILDEAHTIKN--RNAKATQAACALKSEYRWCLTGTPM 442

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRC 784
            N     L  LQ ++ FL  + Y  +  AW   I +P    +  GR     R LQ+  + 
Sbjct: 443 QNN----LDELQSLINFLRIKPY-NDLAAWREQITKP----LNNGRGGLAIRRLQVYLKA 493

Query: 785 MISARKTDL 793
            +  R  D+
Sbjct: 494 FMKRRTKDV 502



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   ++ IE  L  + I +      M +  +  SLD  R+      LL    +
Sbjct: 833  KFIVFSFFTSMLNKIEPFLKDSHIGYVRYDGAMRNDLREISLDKLRNSPKTRVLLCSLRA 892

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  L ++ TVEE++++ L
Sbjct: 893  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKLTIKNTVEERIVD-L 951

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 952  QERKR 956


>gi|308176367|ref|YP_003915773.1| ATP-dependent helicase [Arthrobacter arilaitensis Re117]
 gi|307743830|emb|CBT74802.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117]
          Length = 1115

 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 75/124 (60%), Gaps = 3/124 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            + +IFSQF  ++ V+  +LT  G+KF  +Y   ++ N+ K ++ F+   + L L+   + 
Sbjct: 968  RALIFSQFTSYLKVLADKLTERGVKF--VYLDGNTRNRAKVIEQFKEGEAPLFLISLKAG 1025

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
              GL+L+     FL++P W+ ++E Q I R HR+G TR + V  +  +GT+EE+++  LQ
Sbjct: 1026 GFGLNLTEADYCFLLDPWWNPAVEAQAIDRTHRIGQTRQVMVYRMISQGTIEEKVVA-LQ 1084

Query: 1113 DTDR 1116
            ++ R
Sbjct: 1085 ESKR 1088



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 44/290 (15%)

Query: 557 ETQGFH---KIFQA-FGLIRRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYL 612
           + +GFH   ++++  FG I   + G+      KTL  +A  L A +L   +P    +L  
Sbjct: 647 QVEGFHWLSRLYEGGFGGILADDMGLG-----KTLQTIALILHAHKL-WADPQACAQLPA 700

Query: 613 SRAT----LIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA---HSLAWDYDVVI 665
           ++ T    L+V PS +V +W+ +I +     ++   V  +   PSA     LA +YDV++
Sbjct: 701 TQRTQLPFLVVAPSSVVSNWEMEINKFAPSLRV---VSVEGTLPSARKLQELAENYDVIL 757

Query: 666 TTFN--RLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
           TT+   RL+ E    ++       +  ++LDE   + +    T   + A++L  + +  +
Sbjct: 758 TTYTLLRLNDEIYEAQR-------FAGLILDEAQFVKN--KSTKAHRTAVNLQTNFKLAV 808

Query: 724 TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
           TGTP  N     LS L  +L  +   A   N   ++    RP E     G   +L LL R
Sbjct: 809 TGTPMENN----LSELGALLSLV-APALFLNTTRFNRQFARPIEV---LGDRDVLALLQR 860

Query: 784 -----CMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL 828
                 +   +++ +  +P   ++   +  +EEH   Y+  +   R+ IL
Sbjct: 861 RIKPFMLRRTKESVVLDLPAKQEQQVLVRLSEEHQHVYDTHLNRERQKIL 910


>gi|169607196|ref|XP_001797018.1| hypothetical protein SNOG_06654 [Phaeosphaeria nodorum SN15]
 gi|111065365|gb|EAT86485.1| hypothetical protein SNOG_06654 [Phaeosphaeria nodorum SN15]
          Length = 1201

 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 3/131 (2%)

Query: 988  KALPD-KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
            K  PD KVI+FSQF   + +IE  L   G  F      M +  +  SL   R D     L
Sbjct: 987  KETPDHKVIVFSQFTSMLDLIEPFLRRQGYNFTRYDGSMRNDLREASLHKLREDKRTRVL 1046

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            L      SLGL+L+  +RV +MEP W+  +EEQ I R HR+  T  + V  L++  +VEE
Sbjct: 1047 LCSLKCGSLGLNLTAASRVVIMEPFWNPFVEEQAIDRVHRLNQTVDVTVYRLSIHNSVEE 1106

Query: 1106 QMLEFLQDTDR 1116
            ++LE LQ+  R
Sbjct: 1107 RILE-LQEAKR 1116



 Score = 70.1 bits (170), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 91/210 (43%), Gaps = 34/210 (16%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLA---WDYDVVITTFN 669
           S+ TL++ P  L+  W+ +I   V   + H      H  PS    A     YDVVITT+ 
Sbjct: 446 SKGTLVIAPLALIKQWEAEINTKVT--KSHALKVLVHHGPSRTKSADKLKQYDVVITTYQ 503

Query: 670 RLSAEWGRRKKSP------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWL 722
            L++E       P         V+W R MLDE HT+    N   K+  A   + +  RW 
Sbjct: 504 VLASEHASCGDGPDGLKKGCFAVNWYRTMLDEAHTIK---NRNAKMTKACYEIRSHYRWC 560

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLL 778
           LTGTP  N     L  LQ +++FL  + Y  +   W   I  P    M+ GR     R L
Sbjct: 561 LTGTPMQNN----LDELQSLIRFLRIQPYC-DMSNWKDSISGP----MKNGRGNLAMRRL 611

Query: 779 QLLHRCMISARKTDLQTIPLCIKEVTFLNF 808
           Q+  +  +  R  ++      +K+   LNF
Sbjct: 612 QIFLKAFMKRRTKEV------LKKEGALNF 635


>gi|389751049|gb|EIM92122.1| hypothetical protein STEHIDRAFT_88864 [Stereum hirsutum FP-91666 SS1]
          Length = 1302

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 68/117 (58%), Gaps = 1/117 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  IE+ L  A I +  +   M    + ++++  ++D SC  LL+   +
Sbjct: 1150 KSVVFSQWTTMLDKIEEALETANIHYERLDGTMKRDERTRAMEALKNDPSCEVLLVSLKA 1209

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +GL+L+   RV+LM+P W+ ++E Q + R HR+G T+P+      +  ++E+++L
Sbjct: 1210 GGVGLNLTAAQRVYLMDPYWNPAVENQAVDRIHRLGQTKPVTTIKYVIENSIEDRLL 1266



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 16/152 (10%)

Query: 676 GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQ 735
           G    S +  V+W RV+LDE H++  +   T   +    L A  R  LTGTP  N    +
Sbjct: 727 GPEATSALQSVYWFRVVLDEAHSIKET--STVGCRACCDLMADRRLCLTGTPVQN----K 780

Query: 736 LSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQT 795
           L  +  ++KFL  E +  ++  W   I  P +     G +R LQ + +C+   R  + +T
Sbjct: 781 LDDMFALIKFLRLEPF-DDKNTWTEFIGSPVKYGQPLGIAR-LQRIMKCITLRRTKESKT 838

Query: 796 --------IPLCIKEVTFLNFTEEHAGTYNEL 819
                   +P    ++ +L F E+    Y++ 
Sbjct: 839 NAGDRILSLPPRQDQLLYLKFDEKEQAIYDQF 870



 Score = 43.1 bits (100), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 23/100 (23%)

Query: 161 PCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYF-----YVNTVSGDIAT 215
           P +  KL+PHQ+ A+ ++L RE            ++  E+G Y      + NT++G  + 
Sbjct: 390 PEVGTKLYPHQKKALTFLLERER-----------EITNEEGQYSSLWQSHTNTMTGQPSW 438

Query: 216 GTAPTMRD-FH------GGMFCDEPGLGKTITALSLILKT 248
               T ++ FH      G +  D+ GLGKTIT +SLI  T
Sbjct: 439 FHLVTQKEIFHEPPVCRGAILADDMGLGKTITCVSLIAAT 478


>gi|225557429|gb|EEH05715.1| ATP-dependent helicase RIS1 [Ajellomyces capsulatus G186AR]
          Length = 1083

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 18/189 (9%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TL+V P  L+  W+++I   V    +L + ++   ++         +DVVITT+  
Sbjct: 326 VGKGTLVVAPLALIKQWESEIGSKVEASHRLRVCIYHGTQRTKHADTLSQFDVVITTYGT 385

Query: 671 LSAEWGRRKKSPM--MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           LS+E    +K P      HW R++LDE HT+ +        Q A +L +  RW LTGTP 
Sbjct: 386 LSSEHAASEKKPTGCFANHWYRIILDEAHTIKN--RNAKATQAACALKSEYRWCLTGTPM 443

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRC 784
            N     L  LQ ++ FL  + Y  +  AW   I +P    +  GR     R LQ+  + 
Sbjct: 444 QNN----LDELQSLINFLRIKPY-NDLAAWREQITKP----LNNGRGGLAIRRLQVYLKA 494

Query: 785 MISARKTDL 793
            +  R  D+
Sbjct: 495 FMKRRTKDV 503



 Score = 55.1 bits (131), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 32/155 (20%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   ++ IE  L  + I +      M +  +  SLD  R+      LL    +
Sbjct: 834  KFIVFSFFTSMLNKIEPFLKDSHIGYVRYDGAMRNDLREISLDKLRNSPKTRVLLCSLRA 893

Query: 1052 ASLGLDLSFVTRVFLMEPIWD------------------------------RSMEEQVIS 1081
             SLGL+L+  +RV ++EP W+                              + +EEQ I 
Sbjct: 894  GSLGLNLTAASRVVILEPFWNPVWHSSASSQTIFYSKFQSQKSELTCNQTPQFVEEQAID 953

Query: 1082 RAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            R HR+  T  + +  L ++ TVEE++++ LQ+  R
Sbjct: 954  RVHRLNQTVDVKIYKLTIKNTVEERIVD-LQERKR 987


>gi|344230376|gb|EGV62261.1| hypothetical protein CANTEDRAFT_125943 [Candida tenuis ATCC 10573]
          Length = 814

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 20/210 (9%)

Query: 913  LCL----DCVAMDSEKCSLPGC--GFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYR 966
            LC+    D    DS K   P C  G   ++Q P +    +  +    V  + I+L     
Sbjct: 580  LCIQEYCDSFGGDSSKLECPVCHIGLSIDLQQPALEVDEQEFSKASIV--NRIQLGTHGN 637

Query: 967  QWSNTNTF--LKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAG---IKFAGM 1021
            QW ++     L ++LY+  L S+K    K I+FSQF   + +IE +L  AG   +K  G 
Sbjct: 638  QWKSSTKIEALVEELYK--LRSDKHTL-KSIVFSQFTSMLDLIEWRLRRAGFQTVKLQGS 694

Query: 1022 YSPMHSSNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVI 1080
             SP    N IK    F  +A     L+   A  + L+L   ++VFLM+P W+ S+E Q +
Sbjct: 695  MSPQQRDNTIK---FFMENAQVEVFLVSLKAGGVALNLCEASQVFLMDPWWNPSVEWQSM 751

Query: 1081 SRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             R HR+G  RPI +    ++ ++E +++E 
Sbjct: 752  DRVHRIGQKRPIKITRFCIKDSIESKIIEL 781



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 20/172 (11%)

Query: 594 LAALRLALCEPLDSVRLYLSRAT----LIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH 649
           + A  + + + + ++ L+++  +    L+V P+  +  WK +I+ H    +L + ++   
Sbjct: 226 ILADEMGMGKTIQTIALFMNDLSKGPNLVVGPTVALMQWKHEIESHTN-NKLKVLLFHGA 284

Query: 650 KKPSAHSLAWDYDVVITTFNRLSAEWGR------------RKKSPMMQVHWLRVMLDEGH 697
            + S  S    YDV++T+++ L + + +            ++KSP+  + + RV+LDE H
Sbjct: 285 NRSSDVSELSKYDVILTSYSVLESVFRKQNYGFKRKSGLVKEKSPLHAIKFYRVILDEAH 344

Query: 698 TLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPM-LKFLHE 748
            +    + T K   A +L    RW L+GTP  N      S ++ M L+  HE
Sbjct: 345 NIKDRSSGTAK--AANNLNTEKRWCLSGTPLQNRIGEMYSLIRYMKLRPFHE 394


>gi|340939154|gb|EGS19776.1| helicase-like protein [Chaetomium thermophilum var. thermophilum
           DSM 1495]
          Length = 1056

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 90/192 (46%), Gaps = 19/192 (9%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV---RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
           +S+ATL+V P  L+  W+ +I++ V   RP  L + V    K+ +   +   YDVVITT+
Sbjct: 272 ISKATLVVAPLALIRQWEAEIKEKVSESRP--LKVCVHHGQKRSTDPKVLAQYDVVITTY 329

Query: 669 NRLSAEWGRR----KKSPMM---QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRW 721
             L +E G      KK P +    VHW RV+LDE H++ +      K     +L A  RW
Sbjct: 330 QTLVSEHGGSNLDPKKKPQIGCFGVHWFRVILDEAHSIKNRNAKATK--ACCALRAEYRW 387

Query: 722 LLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLL 781
            LTGTP  N     L  LQ ++ FL    Y  +   W   I  P +        R L  L
Sbjct: 388 CLTGTPMQNN----LDELQSLVHFLRISPY-DDLTEWRQQIDLPLKNGKGHIAIRRLHSL 442

Query: 782 HRCMISARKTDL 793
            +C +  R  D+
Sbjct: 443 LQCFMKRRTKDI 454



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 3/126 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQL-TVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            K I+FSQF   + +IE  L    G+K       M +  +  +L   R+D     LL    
Sbjct: 849  KFIVFSQFTTMLDLIEPFLRNQPGLKAVRYDGKMANDAREAALHALRNDPHTRILLCSLK 908

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L ++ TVE ++LE 
Sbjct: 909  CGSLGLNLTAATRVIIIEPFWNPFVEEQAIDRVHRLTQTVDVVVYKLTVQDTVEARILE- 967

Query: 1111 LQDTDR 1116
            LQ+  R
Sbjct: 968  LQEKKR 973


>gi|403416620|emb|CCM03320.1| predicted protein [Fibroporia radiculosa]
          Length = 1168

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 111/238 (46%), Gaps = 36/238 (15%)

Query: 617 LIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWG 676
           L++VP  ++ +W+ QI  HV+ G L   V+    +  +      YDV+ITT+  ++ E G
Sbjct: 485 LVIVPLSVLSNWEKQIADHVQEGALTSCVYYGATRSMSPEELKKYDVIITTYQTVTKEHG 544

Query: 677 ---------------RRKKSP--MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTAS 718
                          R KKS   +  V W R++LDEGH++    NL  K+  A+ +LTA 
Sbjct: 545 DSFVTKTEVEGPSQKRSKKSENGLFDVAWKRIILDEGHSI---RNLRTKMAKAVCALTAQ 601

Query: 719 NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL 778
            RW+L+GTP  N+P      L  +L FL       N+  +   +LRP +     G   L 
Sbjct: 602 RRWVLSGTPIVNSPKD----LGSILTFLRICRPLDNEDFFKRMLLRPLKDGDPSGGELLR 657

Query: 779 QLL-HRCMISARKTDLQT------IPLCIKEVTF--LNFTEEHAGTYNELVVTVRRNI 827
            L+ H C+   R  ++Q       +PL   ++T   +  T+E    Y+ +    ++ I
Sbjct: 658 ALMSHVCI--RRTKEMQDSEGNHLVPLPPVDITVVPVTLTDEARELYDTVEEVAKQRI 713



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 3/63 (4%)

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHR---MGATRPIHVETLAMRGTVEEQM 1107
            + +LGL+L+    V+LM+P W   +E Q I R +R   +G T+P+HV  L    TVE ++
Sbjct: 1045 AGALGLNLTVANNVYLMDPWWQEGIESQAIDRCNRHVVIGQTKPVHVYQLIAENTVEAKV 1104

Query: 1108 LEF 1110
            +E 
Sbjct: 1105 IEI 1107


>gi|340720770|ref|XP_003398803.1| PREDICTED: transcription termination factor 2-like [Bombus
           terrestris]
          Length = 953

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 19/216 (8%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TL+V P+ L+  W+ +I +  + G L + V+    + +       +DVVITT+N L  E
Sbjct: 431 GTLVVCPASLLSQWENEIDRRCKRGMLSVKVYHGTNRENVPKRLAKHDVVITTYNILLRE 490

Query: 675 WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
           +  +  S   ++HW R++LDE H + +  + +   Q    L A+ RW LTGTP  N    
Sbjct: 491 F--KSNSMAYKIHWERIILDEAHVIRN--HKSQASQSVCGLVANKRWALTGTPIQNKE-- 544

Query: 735 QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ 794
               L P+LKFL    +  + + W     R  + +   GR RL  ++   M+   K +LQ
Sbjct: 545 --MDLYPILKFLKCTPFD-DLRVWK----RWVDNKSTAGRQRLATVMKTLMLRRTKQELQ 597

Query: 795 ------TIPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
                  +P    E   +    E    Y ++++  R
Sbjct: 598 ANGMLENLPEKFVEEILIKLDPEEQLVYEKVLIYSR 633


>gi|393219844|gb|EJD05330.1| hypothetical protein FOMMEDRAFT_138838 [Fomitiporia mediterranea
            MF3/22]
          Length = 633

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K IIFSQF   + +IE  L   G++FA     M    +  SL   R D S   +L+   
Sbjct: 469  EKTIIFSQFTSMLDLIEPFLRNEGLRFARYDGTMRKDQRDASLQKIREDKSTTVILISFK 528

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S GL+L+    V L++  W+ ++EEQ   RAHR G TR +++  L +  TVEE++L  
Sbjct: 529  AGSTGLNLTACNNVILVDLWWNPALEEQAFDRAHRFGQTRTVNIYKLTIEQTVEERILA- 587

Query: 1111 LQDTDR 1116
            LQ+  R
Sbjct: 588  LQEKKR 593



 Score = 47.0 bits (110), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 54/176 (30%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS----AHSLAWDYDVVITTF 668
           S +T++V P  LV  W ++IQ+      + L V  +H  PS      +L   + VVIT++
Sbjct: 79  SASTIVVCPVALVSQWASEIQKMA----VGLRV-IEHHGPSRTTNPETLKRAH-VVITSY 132

Query: 669 NRLSAEWG------------------------------------RRKKSPMMQVHWLRVM 692
           + LS+E+G                                     R K  + ++ W R++
Sbjct: 133 SVLSSEYGVYQNAEGKPRKGGGGSSEESDSSDDIIRKRSVGKGKARGKDALFRIKWWRIV 192

Query: 693 LDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
           LDE H +    N   K  +A  +L    RW LTGTP  N     +  L  +L FL 
Sbjct: 193 LDEAHNIK---NRKTKAAIACCALEGKYRWALTGTPLQNN----VEELYSLLNFLR 241


>gi|406862146|gb|EKD15197.1| DNA repair protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
          Length = 1170

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE  L   G KF      M +  +  SL   R+D +C  LL     
Sbjct: 953  KFIVFSQFTSMLDLIEPFLRQRGFKFTRYDGSMKNDMREASLSKLRNDKNCRILLCSLKC 1012

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+     + V  + ++ TVEE++L+ L
Sbjct: 1013 GSLGLNLTAATRVVILEPFWNPFVEEQAIDRVHRLTQKIDVIVYKITIKDTVEERILD-L 1071

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 1072 QEKKR 1076



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 76/165 (46%), Gaps = 18/165 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTF 668
           L + TL+V P  L+  W+ +I+  V     H      H  PS      D   +DVV+TT+
Sbjct: 436 LEKTTLVVAPLALIRQWEAEIKDKVE--HSHSLRVCVHHGPSRTKRFADLKKFDVVVTTY 493

Query: 669 NRLSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
             L +E+G         K     +HW RV+LDE HT+ +        Q   +L +  RW 
Sbjct: 494 QILVSEFGGSSEHAGGVKVGCFGLHWYRVILDEAHTIKN--RNAKATQACYALRSEYRWC 551

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFE 767
           LTGTP  N     L  LQ ++KFL  + Y  + + W   I RP +
Sbjct: 552 LTGTPMQNN----LDELQSLIKFLRIKPY-DDLREWKDQIDRPLK 591


>gi|343470795|emb|CCD16616.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 899

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 1/120 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +KVIIFSQF + + +I+ +L  A +K   +   +  S +   L  F  D S  A+L+   
Sbjct: 747  EKVIIFSQFGDALDLIQLRLQKAAVKTVKLVGSLMLSQRQSVLKAFLRDKSIKAILISLK 806

Query: 1052 AS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A   GL+L     V L++P W+ ++E Q   RAHR+G  RP+ V      G+VEE+MLE 
Sbjct: 807  AGGEGLNLQVANHVLLVDPWWNPAVEMQAAQRAHRIGQVRPVRVMRFVTEGSVEERMLEL 866



 Score = 43.1 bits (100), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 6/74 (8%)

Query: 680 KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHL 739
           +S    + W RV+LDE H +   +N TN  + A++L A +RW LTGTP  N    ++  +
Sbjct: 375 ESVFHSIEWSRVVLDEAHRI-KGIN-TNTSRAALALVAEHRWCLTGTPLQN----RVGDV 428

Query: 740 QPMLKFLHEEAYGQ 753
             +++FL    Y +
Sbjct: 429 YSLVRFLRFAPYSR 442


>gi|313870791|gb|ADR82283.1| DNA repair protein [Blumeria graminis f. sp. tritici]
          Length = 883

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTFNR 670
           + TL+V P  L+  W+ ++++ V   +L+      H  P       D   YDVVITT+  
Sbjct: 225 KTTLVVAPLALIRQWEVEVKEKV--SELYTLKVCVHHGPQRTKRFQDLAKYDVVITTYQI 282

Query: 671 LSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLT 724
           L +E+G         K+    +HW R++LDE HT+ +        Q   SL +  RW L+
Sbjct: 283 LVSEFGNSSPDENGPKAGCFGLHWYRIILDEAHTIKN--RNAKATQACYSLRSDYRWCLS 340

Query: 725 GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL 777
           GTP  N+    L  LQ ++KFL  + Y  + + W   I RP    M+ G SRL
Sbjct: 341 GTPMQNS----LDELQSLIKFLRIKPY-DDLRTWKEQIERP----MKSGDSRL 384



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 5/153 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   +++IE       + F+     M + ++  SL   R+D  C  LL     
Sbjct: 686  KFIVFSQFTSMLNLIEPFFHANDLVFSRYDGSMRNDSREASLAKLRNDKKCRILLCSLKC 745

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+     + +  + +  TVEE++LE L
Sbjct: 746  GSLGLNLTAATRVVILEPFWNPFVEEQAIDRVHRLTQKTDVIIYKITISKTVEERILE-L 804

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHRTLHDFAE 1144
            QD    +R L  E ++  + G  S   +++  +
Sbjct: 805  QDK---KRALANETIEGGKNGGVSKLGMNEIMQ 834


>gi|66519055|ref|XP_393754.2| PREDICTED: transcription termination factor 2 [Apis mellifera]
          Length = 954

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 19/216 (8%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TL+V P+ L+  W+ +I    + G L + V+    + +        DVVITT+N L+ E
Sbjct: 431 GTLVVCPASLLSQWENEINHRCKRGMLSVEVYHGTNRENVPKRLARNDVVITTYNILTRE 490

Query: 675 WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
           +  +  S + ++HW R++LDE H + +  + +   Q    L AS RW LTGTP  N    
Sbjct: 491 F--KTNSTVYKIHWNRIILDEAHIIRN--HKSQASQSVCGLLASKRWALTGTPIQNKE-- 544

Query: 735 QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ 794
               L  +LKFL    +  + + W     R  + +   GR RL+ ++   M+   K +LQ
Sbjct: 545 --MDLYSILKFLKCSPFD-DLRVWK----RWVDNKNAAGRQRLVTVMKTLMLRRTKQELQ 597

Query: 795 ------TIPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
                 ++P    E  F+    +    Y ++++  R
Sbjct: 598 INGMLESLPEKFVEEIFIKLDSQEQLVYEKVLIYSR 633


>gi|302814039|ref|XP_002988704.1| hypothetical protein SELMODRAFT_128555 [Selaginella moellendorffii]
 gi|300143525|gb|EFJ10215.1| hypothetical protein SELMODRAFT_128555 [Selaginella moellendorffii]
          Length = 669

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +I     +AG+K   +   M  S +  ++D FR+D  C   LM   A
Sbjct: 541  KGLVFSQFTSMLDLIGYSFELAGVKCVKLDGGMSLSQRSTAIDTFRNDPECKLFLMSLKA 600

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              + L+L+  + +FLM+P W+ ++E Q   R HR+G  +PI V    +  +VEE++L+ 
Sbjct: 601  GGVALNLTVASYIFLMDPWWNPAVEHQAQDRIHRIGQYKPIRVTRFVIENSVEERILKL 659



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 73/147 (49%), Gaps = 16/147 (10%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW 675
           TL+V P   ++ WK++I++  + G L + ++  ++K         +DVV+TT++ +  ++
Sbjct: 182 TLVVCPVVAIEQWKSEIERFTKEGTLKVLIYHGNRKHITVKELAKHDVVLTTYSIIEHDY 241

Query: 676 ----------GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTG 725
                      +   S +  V W+R++LDE HT+      +N  +   +L +  +W L+G
Sbjct: 242 RKILPDKLSAAKDDFSLLHSVKWVRIILDEAHTIKD--RASNTAKSVFALQSCYKWGLSG 299

Query: 726 TPTPNTPNSQLSHLQPMLKFLHEEAYG 752
           TP  N    ++  L  ++++L    Y 
Sbjct: 300 TPLQN----RVGELYSLVRYLEINPYA 322


>gi|226286603|gb|EEH42116.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb18]
          Length = 1092

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 12/203 (5%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF----N 669
           + TL+V P   V +W +QI++H+  G L  +V+    +    +    YD+VITT+    +
Sbjct: 512 KTTLLVCPLSAVGNWVSQIEEHLEAGALSYYVFHGPTRTEDPAELSKYDLVITTYSTILS 571

Query: 670 RLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP 729
            LS +  +R  SP+ +++  R++LDE HT+        + Q   +L A  RW +TGTP  
Sbjct: 572 ELSGKNSKRGTSPLTRMNMFRIVLDEAHTIRE--QSAGQSQAIFALDAQRRWSVTGTPIQ 629

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISAR 789
           N    +L  L  + +FL    Y +  + +   I+ PF++E  +    L  L+    +  R
Sbjct: 630 N----RLEDLASVTRFLRLHPYVEKAQ-FAAYIIAPFKSENPKAIPNLRMLVDSFTLR-R 683

Query: 790 KTDLQTIPLCIKEVTFLNFTEEH 812
             D   +P    ++  L F+E+ 
Sbjct: 684 IKDRINLPPRHDKIITLTFSEQE 706



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 13/166 (7%)

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGI-KFAGMYSPMHSSNKIKSLDM 1036
            D    + +S +  P K I+FS +  H+ +I+  L   GI  F  +   M    +  +LD 
Sbjct: 923  DTIEESKKSPEKAPIKSIVFSSWTSHLDLIQIALEDNGITSFTRLDGTMSLKQRNAALDA 982

Query: 1037 FRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            FR D +   LL   G+  +GL+L+  +R ++MEP ++ +   Q + R HR+G TR +   
Sbjct: 983  FRDDDNVTILLATLGAGGVGLNLTSGSRAYIMEPQYNPAAIAQAVDRVHRLGQTREVTTI 1042

Query: 1096 TLAMRGTVEEQMLEFLQDTDRC-----------RRLLKEELVKPER 1130
               M+ ++EE++ E  +   +            RR L++E +K  R
Sbjct: 1043 QFIMKDSIEEKIAELARKKQQMADMSLNRGRLDRRELQQERMKEYR 1088



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 161 PCMKLKLFPHQQAAVEWMLHRE-----WNAEVLRHPLYIDLATEDGFYFYVNTVSGDIAT 215
           P +K  L PHQ+ A+ +ML +E        E   + L+      +G   Y   +SG  + 
Sbjct: 397 PMIKTPLLPHQRQALWYMLQKEKPRKFGENEAENNSLWRIQHQSNGQKLYREIISGVTSF 456

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLILKT 248
              P +   +GG+  D  GLGKT++ LSL++ T
Sbjct: 457 EEPPQV---YGGLLADVMGLGKTLSILSLVMST 486


>gi|358376157|dbj|GAA92725.1| SWI/SNF family DNA-dependent ATPase Ris1 [Aspergillus kawachii IFO
           4308]
          Length = 1187

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 51/270 (18%)

Query: 599 LALCEPLDSVRLYLSRA--------TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH- 649
           + L + + ++ L +SR         TLI+ P  LV  WK +I++ V+PG+  L +W  H 
Sbjct: 514 MGLGKTIQAIALIVSRPSTDPERKPTLIIAPVALVQQWKREIERMVKPGKHQLSIWVLHG 573

Query: 650 -KKPSAHSLAWDYDVVITTFNRLSAEWGRRKKS------------------PMM--QVHW 688
            K+ +   L   YDVV+TTF  L+AE  R++K                   P++  +  W
Sbjct: 574 DKRLTFRELKR-YDVVLTTFGTLAAELKRKQKYEELEERDVNLARQALDTLPLLGRRCKW 632

Query: 689 LRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
            RV+ DE   +    N   K  +A   L  + RW +TGTP  N     +  L  ++KFL 
Sbjct: 633 HRVIADEAQCIK---NRNAKAALACCQLNTTYRWCMTGTPMMNN----VEELHSLIKFLR 685

Query: 748 EEAYGQNQKAWDGGILRPFEAE--MEEGRSRLLQLLHRCMISAR--------KTDLQTIP 797
              Y  N + ++    RP ++   M E     LQ+L + ++  R        K  LQ +P
Sbjct: 686 IRPYS-NIETFNRDFTRPLKSSPAMREKAMLQLQVLLKAILLRRTKSSEIDGKPILQ-LP 743

Query: 798 LCIKEVTFLNFTEEHAGTYNELVVTVRRNI 827
             + E     F+EE    YN L    +R +
Sbjct: 744 PKVSERVHAVFSEEEQEFYNTLESRSQREV 773



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K IIFSQF   + ++E  +   G  +      M  +++  S+  F  +  C  +L+   
Sbjct: 1032 EKTIIFSQFTSLLDLLEIPIARQGWDYRRYDGSMRPADRNASVMDFTDNEDCRIMLVSLK 1091

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + + GL+L   ++V + +P W+  +EEQ + RAHR+G  RP+ +  + ++ TVE+++LE 
Sbjct: 1092 AGNAGLNLVAASQVIIFDPFWNPYVEEQAVDRAHRIGQVRPVQIHRIVVKDTVEDRILE- 1150

Query: 1111 LQDTDR 1116
            LQD  R
Sbjct: 1151 LQDKKR 1156


>gi|440789503|gb|ELR10812.1| SNF2 family protein [Acanthamoeba castellanii str. Neff]
          Length = 1105

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 109/253 (43%), Gaps = 60/253 (23%)

Query: 914  CLDCVAMDSEKCSLPGCGFLY--EMQSPEILTRPE---NPNPK----------------- 951
            C  C+A    + S+  CG L+  E      + RP+    P PK                 
Sbjct: 825  CAICLADTVAQPSVTPCGHLFCRECIDGLFMGRPQPGDGPKPKSSRTALCPTCRREMTYG 884

Query: 952  ----WPVPQDLIELQPSYRQWSNTNTF--LKQDLYRPNLESNKALPDKVIIFSQFLEHIH 1005
                 PVPQ++I ++P   QW  +  F  L  DL R  +E    L  K +IFSQ+   + 
Sbjct: 885  EVRHVPVPQEMINIKPE-EQWKPSTKFQALVDDLNR--VEEEDPLI-KSVIFSQWTSTLD 940

Query: 1006 VIEQQLTVAGI---------------KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            ++E  L  AG                 F  +   M +  + K +  F  D     +L+  
Sbjct: 941  LVEIALKKAGYAAQSSARWKGARAHNSFLRLDGSMSAPEREKVIATFYADPQAKVILISL 1000

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR--------- 1100
             +  LGL+++  + V+L++P W+ S EEQ I R HR+G  RP+HV+   ++         
Sbjct: 1001 KAGGLGLNVTCASHVYLLDPWWNPSAEEQAIDRVHRIGQKRPVHVKKFVIQAMCGGVSVT 1060

Query: 1101 ---GTVEEQMLEF 1110
               GTVEE++L+ 
Sbjct: 1061 VVNGTVEEKILQL 1073



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 45/217 (20%)

Query: 606 DSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLA----WDY 661
           D+   Y S ATLIVVP      W  ++++H +   L + +   H  P   ++        
Sbjct: 402 DATGRYSSNATLIVVP------WAGEVKKHTKAKLLDVLL---HHGPQRWNVPVTRLAQA 452

Query: 662 DVVITTFNRLSAEWGRRKKSP-------------------------MMQVHWLRVMLDEG 696
           D+VIT++  LS E  +++ +                          ++ + W RV+LDE 
Sbjct: 453 DIVITSYATLSKEHEQQQSASAEGSEKQTKRKKKKPKAAVKKRPIQLLSIRWHRVILDEA 512

Query: 697 HTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQK 756
           H + S   L  K     SL A  RW LTGTP  N    QL  L  ++ FLH E + +  +
Sbjct: 513 HLIRSRNTLMAK--GTFSLIAERRWCLTGTPIQN----QLDDLFSLIHFLHAEPFAE-YR 565

Query: 757 AWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDL 793
            W   I +P+E        +L  LL   ++   K  L
Sbjct: 566 VWKNVIAKPYERNDPRAAEQLRNLLGHILLRRTKAVL 602



 Score = 44.3 bits (103), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 190 HPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQ 249
           HP++      DG  FY +  +  I     P++    GG+  D+ GLGKTI +LSLIL  +
Sbjct: 335 HPMWKPATFPDGTKFYYSDYNEAIRH--VPSLTPHRGGILADDQGLGKTIQSLSLILTNK 392

Query: 250 GT 251
           G+
Sbjct: 393 GS 394


>gi|340514201|gb|EGR44467.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1031

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 5/136 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + ++E  L   G  F      M +  + +SL   R D     LL     
Sbjct: 818  KFIVFSQFTSMLDLVEPFLRKEGFAFTRYDGSMRNDAREESLRRLREDKKTRVLLCSLKC 877

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L ++ TVEE +L+ L
Sbjct: 878  GSLGLNLTAATRVIIIEPFWNPFVEEQAIDRVHRLTQTVDVVVYKLTVKQTVEEGILD-L 936

Query: 1112 QDTDRCRRLLKEELVK 1127
            QD    +RLL E+ ++
Sbjct: 937  QDK---KRLLAEQTIE 949



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 13/187 (6%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TL+V P  L+  W++++ + V   Q L + V    ++         YDVVITT+  
Sbjct: 258 IDKTTLVVAPLALIRQWESELNERVDKAQGLKVLVHHGPQRTKDSKDLKQYDVVITTYQI 317

Query: 671 LSAEWGRRKKSPMMQ---VHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGT 726
           L +E G+ +    M     HW R++LDE HT+    N   K   A  +L +  RW L+GT
Sbjct: 318 LVSEHGKSQGDDQMGCFGFHWWRLILDEAHTI---KNRNAKATKACYALRSEYRWCLSGT 374

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
           P  N     L  LQ +++FL    Y  + KAW   I  P +        R L    RC +
Sbjct: 375 PMQNN----LEELQSLVRFLRIRPY-DDIKAWKEQIELPMKGGKGHIALRRLHSFLRCFM 429

Query: 787 SARKTDL 793
             R  ++
Sbjct: 430 KRRTKEI 436


>gi|315043012|ref|XP_003170882.1| hypothetical protein MGYG_06873 [Arthroderma gypseum CBS 118893]
 gi|311344671|gb|EFR03874.1| hypothetical protein MGYG_06873 [Arthroderma gypseum CBS 118893]
          Length = 1118

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 8/128 (6%)

Query: 607 SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVIT 666
           S+ + LS ATL++VP  L+DHW  +I +H     + +   +    PSA  L   YD+V+ 
Sbjct: 377 SITMQLSSATLVIVPPNLIDHWLNEIAKHTEGLMVLVLRDSSISTPSATEL-LKYDIVLF 435

Query: 667 TFNRLSAEWGR-------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
           +  R   E G           SP+  +HWLR+++DEGH   S+   T+ + M   L    
Sbjct: 436 SQPRFKKESGGFTASGPVTYSSPLRNLHWLRIIVDEGHNFASTGGKTSSVYMLDKLQVER 495

Query: 720 RWLLTGTP 727
           RW+++GTP
Sbjct: 496 RWIVSGTP 503



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 48/72 (66%)

Query: 1037 FRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVET 1096
            F H  +    +    AS GL ++  +RVF++ PIWD ++E Q I RAHR+  TRP++VET
Sbjct: 880  FSHLRADFESVAKVGASHGLHIAAASRVFIVNPIWDPNIESQAIKRAHRISQTRPVYVET 939

Query: 1097 LAMRGTVEEQML 1108
            L ++ T+E++ML
Sbjct: 940  LVLKDTLEDKML 951


>gi|171680898|ref|XP_001905393.1| hypothetical protein [Podospora anserina S mat+]
 gi|170940407|emb|CAP65633.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1112

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQF   + +IE  LT A + F  +   M    +   L+ F+       LL+   +
Sbjct: 962  KSVVFSQFTSFLSLIEPALTQANMHFVRLDGSMSQKARAAVLEEFKESKRFTVLLLSLKA 1021

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+   RVF+M+P W  ++E Q I R HRMG    + +    ++G+VEE+ML+ 
Sbjct: 1022 GGVGLNLTMAKRVFMMDPWWSFAIEAQAIDRVHRMGQEDEVKIYRFIVKGSVEERMLKI 1080



 Score = 67.0 bits (162), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 119/270 (44%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS--------------AHSLAWDY 661
           TL+V P  L+  W+++ ++  + G L   V+   +K +                 +   Y
Sbjct: 532 TLVVAPMSLLAQWQSEAEKASKEGTLKSMVYYGAEKNADLLTLCSEANAENAPDLIITSY 591

Query: 662 DVVITTFNRLSAEWGRRKKS-PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            VV++ F +++++ G R  +  +  +++ RV+LDE H + +    T++      +TA +R
Sbjct: 592 GVVLSEFTQIASKGGDRATTRGLFSLNFFRVILDEAHNIKNRQAKTSR--ACYEITAEHR 649

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE++       ++Q 
Sbjct: 650 WALTGTPIVN----KLEDLFSLVRFLRVEPWN-NFSFWRTFITVPFESKDFVRALDVVQT 704

Query: 781 LHRCMISARKTDLQT------IPLCIK--EVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R  D++T      +PL  K  E+  +  ++     Y  +    +R       
Sbjct: 705 VLEPLVMRRTKDMKTPDGLPLVPLPPKHVEIVDIELSKAERDVYEYVFTRAKRTF----- 759

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
              ++VE+    K +      I  LR SCC
Sbjct: 760 --NANVEAGTVMKAFTSIFAQILRLRQSCC 787



 Score = 47.4 bits (111), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 29/147 (19%)

Query: 165 LKLFPHQQAAVEWMLHREWNA-----EVLRHPLYIDLA-------------TEDGFYFYV 206
           + L P+Q+ ++ WM+ +E +      E   HPL+ +                 D   FY+
Sbjct: 390 MTLRPYQKQSLYWMMAKEKDQQNKEHEESMHPLWEEYTWPLKDYDDKDLPQVPDQPAFYI 449

Query: 207 NTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLA-----DPPDGVKI 261
           N  SGD++       +   GG+  DE GLGKTI  LSLI   +  +A      PP  V  
Sbjct: 450 NPYSGDLSLEFPRQEQHCLGGILADEMGLGKTIQMLSLIHSHRSDVAVKARQSPPHPVGF 509

Query: 262 IWCTHNGDPRCGYYDLSGDKLTCNNMC 288
           +    N  PR     ++G  +  N  C
Sbjct: 510 V----NKLPRLSV--INGASIAANAPC 530


>gi|402073695|gb|EJT69247.1| hypothetical protein GGTG_12867 [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 1027

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 5/136 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE  L   G K+A     M +  + +SL   R+D     LL     
Sbjct: 821  KFIVFSQFTSMLDLIEPFLEKDGFKYARYDGSMKNELREESLHALRNDRQTRLLLCSLKC 880

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +  +VEE++LE L
Sbjct: 881  GSLGLNLTAATRVVILEPFWNPFIEEQAIDRVHRLTQTVDVIVYKLTVEKSVEERILE-L 939

Query: 1112 QDTDRCRRLLKEELVK 1127
            Q+    +RLL E+ ++
Sbjct: 940  QNK---KRLLAEQAIE 952



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 91/201 (45%), Gaps = 19/201 (9%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TL+V P  L+  W+ +I + V   + L++ V     +   ++    YDVVITT+  
Sbjct: 269 IGKGTLVVAPLALIRQWEAEIAEKVSADKRLNVCVHHGPSRTKKYTELAKYDVVITTYQI 328

Query: 671 LSAEWGRRKKS---PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGT 726
           L +E G    +       +HW RV+LDE H++    N   K   A  +L A  RW LTGT
Sbjct: 329 LVSEHGHSTDAVGAGCFGIHWFRVILDEAHSIK---NRNAKATKACCALRAEFRWCLTGT 385

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
           P  N     L  LQ ++ FL    Y  N K W   I +P +        R L  + RC +
Sbjct: 386 PMQNN----LDELQSLVNFLRIAPY-DNLKHWREFIDQPMKGGKGHLAIRRLHSILRCFM 440

Query: 787 SARKTDLQTIPLCIKEVTFLN 807
             R  ++      +KE   LN
Sbjct: 441 KRRTKEI------LKEEGALN 455


>gi|330919879|ref|XP_003298794.1| hypothetical protein PTT_09611 [Pyrenophora teres f. teres 0-1]
 gi|311327831|gb|EFQ93101.1| hypothetical protein PTT_09611 [Pyrenophora teres f. teres 0-1]
          Length = 1239

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            KVI+FSQF   + +IE  L  A   +      M + ++  SL   R D     LL     
Sbjct: 1027 KVIVFSQFTSMLDLIEPFLRRASYTYTRYDGSMRNDHREASLHKLRSDPHTRVLLCSLKC 1086

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV +MEP W+  +EEQ I R HR+  T  + V  L++R +VEE++LE L
Sbjct: 1087 GSLGLNLTAASRVVIMEPFWNPFVEEQAIDRVHRLNQTVDVTVYRLSIRDSVEERILE-L 1145

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 1146 QEAKR 1150



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 97/227 (42%), Gaps = 31/227 (13%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           + TL+V P  L+  W+++I   V +   L + V     +  +      YDVVITT+N L 
Sbjct: 455 KGTLVVAPLALIKQWESEINTKVTKSHALKVLVHHGPNRTKSADKLKQYDVVITTYNVLG 514

Query: 673 AEWGRRKKSP------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTG 725
           +E       P         V W R MLDE HT+    N   K+  A   L +  RW LTG
Sbjct: 515 SEHALCGDGPDGLKKGCFAVSWYRTMLDEAHTIK---NRNAKMTKACYDLRSHYRWCLTG 571

Query: 726 TPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLL 781
           TP  N     +  LQ ++KFL  + Y +   +W   I  P    M+ GR  L    LQ+ 
Sbjct: 572 TPMQNN----IDELQSLIKFLRIQPYCE-LSSWKESIAGP----MKNGRGNLAMKRLQVF 622

Query: 782 HRCMISARKTDLQTIPLCIKEVTFLNF-TEEHAGTYNELVVTVRRNI 827
            R  +  R  D+      +++   LNF  +   G        V RNI
Sbjct: 623 LRAFMKRRTKDV------LRKEGALNFGGKAKEGEEKPAFNIVARNI 663


>gi|403418712|emb|CCM05412.1| predicted protein [Fibroporia radiculosa]
          Length = 785

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K IIFSQF   + +IE  L   GI+F      M   ++  +L+  + +A    +L+   
Sbjct: 624  EKTIIFSQFTSMLDIIEPFLRAEGIRFVRYDGSMTKPHREIALESIKENARTKVILISFK 683

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S GL+L+    V L++  W+ ++E+Q   RAHR G TR +H+  L +  TVE+++LE 
Sbjct: 684  AGSTGLNLTCCNNVILVDLWWNPALEDQAFDRAHRFGQTRNVHIRKLCVPDTVEQKILEL 743

Query: 1111 LQDTDRCRRLLKEEL 1125
                DR R L K  L
Sbjct: 744  ---QDRKRELAKAAL 755



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 57/181 (31%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD---VVITTFN 669
           +RATL+  P  +V  W ++IQ+      + L V  +H  PS  S     +   VVIT++ 
Sbjct: 229 ARATLVACPVAVVSQWASEIQKIA----IGLTV-VEHHGPSRASDPSQLERAHVVITSYQ 283

Query: 670 RLSAEWG-------------------------------------------RRKKSPMMQV 686
            +++E+G                                           ++ K  + +V
Sbjct: 284 TIASEYGAYNPAADKSNSKKTAKSQSQVSDDSDSDSIGKILEKSKRGGSSKKSKDALFRV 343

Query: 687 HWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
            W RV+LDE H + +    T   Q   +L A  RW LTGTP  N+    +  L  + KFL
Sbjct: 344 KWYRVVLDEAHNIKN--RNTKAAQACCALHAKYRWCLTGTPMQNS----VEELYSLFKFL 397

Query: 747 H 747
            
Sbjct: 398 R 398


>gi|242045780|ref|XP_002460761.1| hypothetical protein SORBIDRAFT_02g034440 [Sorghum bicolor]
 gi|241924138|gb|EER97282.1| hypothetical protein SORBIDRAFT_02g034440 [Sorghum bicolor]
          Length = 857

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +I+  L  +GIK   +   M+ + K +++D F  D  C   LM   +
Sbjct: 706  KGIVFSQFTSFLDLIQFSLEKSGIKCVQLNGAMNITEKGRAIDTFTRDPDCRIFLMSLKA 765

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              + L+L+  + VFLM+P W+ ++E Q   R HR+G  +PI      +  TVEE++L+ 
Sbjct: 766  GGVALNLTVASHVFLMDPWWNPAVESQAQDRIHRIGQFKPIKSTRFVIGDTVEERILQL 824



 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 678 RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLS 737
           R +SP+  V W R++LDE H +      +N  +    L +  +W L+GTP  N    ++ 
Sbjct: 368 RGQSPLHSVRWERIILDEAHFIKD--RRSNTARAVFELESEYKWALSGTPLQN----RVG 421

Query: 738 HLQPMLKFLH 747
            L  +++FL 
Sbjct: 422 ELYSLIRFLQ 431


>gi|392558623|gb|EIW51810.1| hypothetical protein TRAVEDRAFT_67605 [Trametes versicolor
           FP-101664 SS1]
          Length = 1142

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 1/100 (1%)

Query: 160 MPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAP 219
           +P ++ KL+ +Q+ +V  M+ RE N   + HPLYI L   DG  FY+   + +I +   P
Sbjct: 183 IPGLRTKLYEYQRRSVATMVARETNPGTIEHPLYISLQGVDGKVFYMQPATMEILS-ELP 241

Query: 220 TMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGV 259
            +    GG+ C+E G GKTI  LSLIL T   LA P +G+
Sbjct: 242 RVSAVRGGILCEELGTGKTIMILSLILSTINQLASPEEGI 281



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 27/146 (18%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           +YL+ ATL++VP  L   W  +I +H       L V      P A  LA  YD+V+ + +
Sbjct: 393 MYLTAATLVIVPDNLRRQWANEILKHCTDLMRVLLVEDQRDLPDAPQLATYYDIVLMSQS 452

Query: 670 RLSAE-----------WG--------------RRKKSPMMQVHWLRVMLDEGHTLGSSLN 704
           R S E           W               R+  SP++Q+ W R+++DEGH   ++  
Sbjct: 453 RFSTEAKKKNVESLHSWNVCDCKLMRRCKCSRRKDVSPLLQIRWKRIVVDEGH--NTAEK 510

Query: 705 LTNKLQMAISLTASNRWLLTGTPTPN 730
            T     +  L+   RW++TGTPT N
Sbjct: 511 RTEYAIFSNILSVERRWIVTGTPTTN 536



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 22/161 (13%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSL-------DMFRHDASCL 1044
            +K +IFS+    +  I +   +  IK+   +S  H+  + +S+       D++R     +
Sbjct: 946  EKFLIFSESQATLAFIGEAFDLCRIKYLS-FSGQHNREERQSMITTFETSDLYR-----V 999

Query: 1045 ALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRP-IHVETLAMRGTV 1103
             LL     + GL+L   +RV   EP+W   +E Q I R HR+G TRP +HV TLA++ T 
Sbjct: 1000 LLLELKYGARGLNLVSASRVIFCEPVWKADVESQAIKRVHRIGQTRPVVHVTTLAIKSTF 1059

Query: 1104 EEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFAE 1144
            EE M+       +  R  K+E  K     A   RT+ DF E
Sbjct: 1060 EEVMVA----RSKALRENKQEFAK----AATDDRTIRDFIE 1092


>gi|308535304|ref|YP_002139277.2| helicase [Geobacter bemidjiensis Bem]
 gi|308052649|gb|ACH39481.2| helicase, putative [Geobacter bemidjiensis Bem]
          Length = 1386

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 11/145 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF+ H+ +I Q +   GI +  +        + K +D F+  +  L L+   + 
Sbjct: 1237 KALVFSQFVGHLELIRQYVEKNGIPYQYLDGSTPPQERKKRVDAFQSGSGDLFLISLKAG 1296

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML---- 1108
             +GL+L+    V  M+P W+ ++E+Q   RAHR+G  RP+ +  L  RGT+EE+++    
Sbjct: 1297 GVGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVTRGTIEEKIVGLHQ 1356

Query: 1109 -------EFLQDTDRCRRLLKEELV 1126
                     L ++D   R+  EEL+
Sbjct: 1357 QKRGLADSLLDESDLSGRISAEELL 1381


>gi|213401963|ref|XP_002171754.1| ATP-dependent helicase RIS1 [Schizosaccharomyces japonicus yFS275]
 gi|211999801|gb|EEB05461.1| ATP-dependent helicase RIS1 [Schizosaccharomyces japonicus yFS275]
          Length = 954

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 85/151 (56%), Gaps = 3/151 (1%)

Query: 967  QWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMH 1026
            QW  T+T +++ L   N    K   DKV++FSQF+  + +    LT  G+KF      M+
Sbjct: 769  QWV-TSTKIEKALEIINDIHKKHPSDKVLLFSQFVPFLELFMVPLTQKGLKFIAYNGGMN 827

Query: 1027 SSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHR 1085
            ++ +  +L  F  D   + LL+   A ++GL+L+    V +++P W+  +E+Q I RAHR
Sbjct: 828  AAQRNDALTAFETDPDAIVLLISLKAGNVGLNLTCANHVIVLDPFWNPFVEDQAIDRAHR 887

Query: 1086 MGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            +G T+ I V  + +  T+EE+++  LQ+  R
Sbjct: 888  IGQTKDITVHRVIVGETIEERVVA-LQNKKR 917


>gi|261205500|ref|XP_002627487.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081]
 gi|239592546|gb|EEQ75127.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081]
          Length = 1072

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 18/189 (9%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TL+V P  L+  W+++I+  V    +L + V+   ++         +DVVITT+  
Sbjct: 345 VGKGTLVVAPLALIKQWESEIESKVTDSHRLRVCVYHGPQRTKHADSLSHFDVVITTYGT 404

Query: 671 LSAEWGRRKKSPM--MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           LS+E    +K P      HW R++LDE HT+ +        Q A +L +  RW LTGTP 
Sbjct: 405 LSSEHASSEKKPTGCFANHWYRIILDEAHTIKN--RNAKATQAACALRSEYRWCLTGTPM 462

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRC 784
            N     L  LQ ++ FL  + Y  +  AW   I +P    +  GR     R LQ+  + 
Sbjct: 463 QNN----LDELQSLINFLRIKPY-NDLAAWREQITKP----LNNGRGGLAIRRLQVYLKA 513

Query: 785 MISARKTDL 793
            +  R  D+
Sbjct: 514 FMKRRTKDV 522



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   ++ IE  L  + I +A     M +  +  SLD  R+      LL    +
Sbjct: 852  KFIVFSFFTSMLNKIEPFLKDSHIGYARYDGAMRNDLREHSLDRLRNSPKTRVLLCSLRA 911

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  L ++GTVEE++++ L
Sbjct: 912  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKLTIKGTVEERIVD-L 970

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 971  QERKR 975


>gi|408399242|gb|EKJ78365.1| hypothetical protein FPSE_01470 [Fusarium pseudograminearum CS3096]
          Length = 1146

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 9/139 (6%)

Query: 596 ALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAH 655
           A R A    L   ++YLS  +++VVPS L+  WK +I++H    ++ +    DH  P   
Sbjct: 367 ARRSAGTLELSKKQVYLSNGSIVVVPSNLLAQWKQEIKKHTEDLRVLVMEGHDHLPPP-- 424

Query: 656 SLAWDYDVVITTFNRLSA---EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
            +  +YD+++ + +RL A   + G    +P+ QVH+ R ++DEGH LG+S  ++ K  M 
Sbjct: 425 KVLLEYDMILFSQSRLEALKRQAGGVDATPLSQVHFKRCIVDEGHKLGNS-RISGKSDML 483

Query: 713 I---SLTASNRWLLTGTPT 728
           +   SL  S+RW++TGTP+
Sbjct: 484 LVLESLHVSSRWIVTGTPS 502



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 1/122 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K++IF +       +   L V  I+       +    + + ++ F H+     LLMD S
Sbjct: 886  EKILIFYENDNIAWYLAGMLEVLQIQHLIYAKGLTVQRRSQYVNTFNHNPKFRVLLMDIS 945

Query: 1052 -ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             A+ GLD+   +R+F + P+ +  +E Q I RA R+   + + VETL ++ ++EE +LE 
Sbjct: 946  QAAFGLDMREASRIFFISPVLNPQVEAQAIGRARRISQKKAVFVETLVLKNSIEEVILER 1005

Query: 1111 LQ 1112
             Q
Sbjct: 1006 KQ 1007



 Score = 55.1 bits (131), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 3/122 (2%)

Query: 140 IDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATE 199
           IDLV        +R L    +  +  +L+P+Q+ +   ML +E   E +  P  + +  +
Sbjct: 180 IDLVENLYDRSVIRNLLNGTIVGLNSELYPYQRRSAALMLQKEVQPEQILDPRLLQIQDQ 239

Query: 200 DGFYFYVNTVSGDIATGTAPTMRD-FHGGMFCDEPGLGKTITALSLILKTQGTLADPPDG 258
           +G  +Y + VS  I     P   D   GG+  +E G GKTI  L+LIL T+   A PP+ 
Sbjct: 240 EGGSWYFDPVSSTILRD--PRYYDGVCGGILAEEMGAGKTIICLALILATRDLPAQPPEH 297

Query: 259 VK 260
           ++
Sbjct: 298 LR 299


>gi|302809340|ref|XP_002986363.1| hypothetical protein SELMODRAFT_123971 [Selaginella moellendorffii]
 gi|300145899|gb|EFJ12572.1| hypothetical protein SELMODRAFT_123971 [Selaginella moellendorffii]
          Length = 585

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +I     +AG+K   +   M  S +  ++D FR+D  C   LM   A
Sbjct: 457  KGLVFSQFTSMLDLIGYSFELAGVKCVKLDGGMSLSQRSTAIDTFRNDPECKLFLMSLKA 516

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              + L+L+  + +FLM+P W+ ++E Q   R HR+G  +PI V    +  +VEE++L+ 
Sbjct: 517  GGVALNLTVASYIFLMDPWWNPAVEHQAQDRIHRIGQYKPIRVTRFVIENSVEERILKL 575



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 73/147 (49%), Gaps = 16/147 (10%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW 675
           TL+V P   ++ WK++I++  + G L + ++  ++K         +DVV+TT++ +  ++
Sbjct: 98  TLVVCPVVAIEQWKSEIERFTKEGTLKVLIYHGNRKHITVKELAKHDVVLTTYSIIEHDY 157

Query: 676 ----------GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTG 725
                      +   S +  V W+R++LDE HT+      +N  +   +L +  +W L+G
Sbjct: 158 RKILPDKLSAAKDDFSLLHSVKWVRIILDEAHTIKD--RASNTAKSVFALQSCYKWGLSG 215

Query: 726 TPTPNTPNSQLSHLQPMLKFLHEEAYG 752
           TP  N    ++  L  ++++L    Y 
Sbjct: 216 TPLQN----RVGELYSLVRYLEINPYA 238


>gi|327348692|gb|EGE77549.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ATCC 18188]
          Length = 1072

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 18/189 (9%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TL+V P  L+  W+++I+  V    +L + V+   ++         +DVVITT+  
Sbjct: 345 VGKGTLVVAPLALIKQWESEIESKVTDSHRLRVCVYHGPQRTKHADSLSHFDVVITTYGT 404

Query: 671 LSAEWGRRKKSPM--MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           LS+E    +K P      HW R++LDE HT+ +        Q A +L +  RW LTGTP 
Sbjct: 405 LSSEHASSEKKPTGCFANHWYRIILDEAHTIKN--RNAKATQAACALRSEYRWCLTGTPM 462

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRC 784
            N     L  LQ ++ FL  + Y  +  AW   I +P    +  GR     R LQ+  + 
Sbjct: 463 QNN----LDELQSLINFLRIKPY-NDLAAWREQITKP----LNNGRGGLAIRRLQVYLKA 513

Query: 785 MISARKTDL 793
            +  R  D+
Sbjct: 514 FMKRRTKDV 522



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   ++ IE  L  + I +A     M +  +  SLD  R+      LL    +
Sbjct: 852  KFIVFSFFTSMLNKIEPFLKDSHIGYARYDGAMRNDLREHSLDRLRNSPKTRVLLCSLRA 911

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  L ++GTVEE++++ L
Sbjct: 912  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKLTIKGTVEERIVD-L 970

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 971  QERKR 975


>gi|225684822|gb|EEH23106.1| DNA repair protein RAD5 [Paracoccidioides brasiliensis Pb03]
          Length = 936

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 12/203 (5%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF----N 669
           + TL+V P   V +W +QI++H+  G L  +V+    +    +    YD+VITT+    +
Sbjct: 356 KTTLLVCPLSAVGNWVSQIEEHLEAGALSYYVFHGPTRTEDPAELSKYDLVITTYSTILS 415

Query: 670 RLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP 729
            LS +  +R  SP+ +++  R++LDE HT+        + Q   +L A  RW +TGTP  
Sbjct: 416 ELSGKNSKRGTSPLTRMNMFRIVLDEAHTIRE--QSAGQSQAIFALDAQRRWSVTGTPIQ 473

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISAR 789
           N    +L  L  + +FL    Y +  + +   I+ PF++E  +    L  L+    +  R
Sbjct: 474 N----RLEDLASVTRFLRLHPYVEKAQ-FAAYIIAPFKSENPKAIPNLRMLVDSFTLR-R 527

Query: 790 KTDLQTIPLCIKEVTFLNFTEEH 812
             D   +P    ++  L F+E+ 
Sbjct: 528 IKDRINLPPRHDKIITLTFSEQE 550



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 12/171 (7%)

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGI-KFAGMYSPMHSSNKIKSLDM 1036
            D    + +S +  P K I+FS +  H+ +I+  +   GI  F  +   M    +  +LD 
Sbjct: 767  DTIEESKKSPEKAPIKSIVFSSWTSHLDLIQIAMEDNGITSFTRLDGTMSLKQRNAALDA 826

Query: 1037 FRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            FR D +   LL   G+  +GL+L+  +R ++MEP ++ +   Q + R HR+G TR +   
Sbjct: 827  FRDDDNVTILLATLGAGGVGLNLTSGSRAYIMEPQYNPAAIAQAVDRVHRLGQTREVTTI 886

Query: 1096 TLAMRGTVEEQMLEFLQDTDRCR-------RLLKEELVKPEREGARSHRTL 1139
               M+ ++EE++ E  +   +         RL + EL   ++E  R +R L
Sbjct: 887  QFIMKDSIEEKIAELARKKQQMADMSLNRGRLDRREL---QQERMREYRNL 934



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 161 PCMKLKLFPHQQAAVEWMLHRE-----WNAEVLRHPLYIDLATEDGFYFYVNTVSGDIAT 215
           P +K  L PHQ+ A+ +ML +E        E   + L+      +G   Y   +SG  + 
Sbjct: 241 PMIKTPLLPHQRQALWYMLQKEKPRKFGENEAENNSLWRIQHQSNGQKLYREIISGVTSF 300

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLILKT 248
              P +   +GG+  D  GLGKT++ LSL++ T
Sbjct: 301 EEPPQV---YGGLLADVMGLGKTLSILSLVMST 330


>gi|189191218|ref|XP_001931948.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187973554|gb|EDU41053.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1242

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            KVI+FSQF   + +IE  L  A   +      M + ++  SL   R D     LL     
Sbjct: 1031 KVIVFSQFTSMLDLIEPFLRRAHYTYTRYDGSMRNDHREASLHKLRSDPKTRVLLCSLKC 1090

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV +MEP W+  +EEQ I R HR+  T  + V  L++R +VEE++LE L
Sbjct: 1091 GSLGLNLTAASRVVIMEPFWNPFVEEQAIDRVHRLNQTVDVTVYRLSIRDSVEERILE-L 1149

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 1150 QEAKR 1154



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 97/227 (42%), Gaps = 31/227 (13%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           + TL+V P  L+  W+++I   V R   L + V     +  +      YDVVITT+N L 
Sbjct: 454 KGTLVVAPLALIKQWESEINTKVTRSHALKVLVHHGPNRTKSADKLKQYDVVITTYNVLG 513

Query: 673 AEWGRRKKSP------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTG 725
           +E       P         V W R MLDE HT+    N   K+  A   L +  RW LTG
Sbjct: 514 SEHALCGDGPDGLKKGCFAVSWYRTMLDEAHTIK---NRNAKMTKACYDLRSHYRWCLTG 570

Query: 726 TPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL----LQLL 781
           TP  N     +  LQ ++KFL  + Y +   +W   I  P    M+ GR  L    LQ+ 
Sbjct: 571 TPMQNN----IDELQSLIKFLRIQPYCE-LSSWKESIAGP----MKNGRGNLAMKRLQVF 621

Query: 782 HRCMISARKTDLQTIPLCIKEVTFLNF-TEEHAGTYNELVVTVRRNI 827
            R  +  R  D+      +++   LNF  +   G        V RNI
Sbjct: 622 LRAFMKRRTKDV------LRKEGALNFGGKAKEGEEKPAFNIVARNI 662


>gi|239611302|gb|EEQ88289.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3]
          Length = 1072

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 18/189 (9%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + + TL+V P  L+  W+++I+  V    +L + V+   ++         +DVVITT+  
Sbjct: 345 VGKGTLVVAPLALIKQWESEIESKVTDSHRLRVCVYHGPQRTKHADSLSHFDVVITTYGT 404

Query: 671 LSAEWGRRKKSPM--MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           LS+E    +K P      HW R++LDE HT+ +        Q A +L +  RW LTGTP 
Sbjct: 405 LSSEHASSEKKPTGCFANHWYRIILDEAHTIKN--RNAKATQAACALRSEYRWCLTGTPM 462

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRC 784
            N     L  LQ ++ FL  + Y  +  AW   I +P    +  GR     R LQ+  + 
Sbjct: 463 QNN----LDELQSLINFLRIKPY-NDLAAWREQITKP----LNNGRGGLAIRRLQVYLKA 513

Query: 785 MISARKTDL 793
            +  R  D+
Sbjct: 514 FMKRRTKDV 522



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FS F   ++ IE  L  + I +A     M +  +  SLD  R+      LL    +
Sbjct: 852  KFIVFSFFTSMLNKIEPFLKDSHIGYARYDGAMRNDLREHSLDRLRNSPKTRVLLCSLRA 911

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV ++EP W+  +EEQ I R HR+  T  + +  L ++GTVEE++++ L
Sbjct: 912  GSLGLNLTAASRVVILEPFWNPFVEEQAIDRVHRLNQTVDVKIYKLTIKGTVEERIVD-L 970

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 971  QERKR 975


>gi|213406021|ref|XP_002173782.1| ATP-dependent helicase RIS1 [Schizosaccharomyces japonicus yFS275]
 gi|212001829|gb|EEB07489.1| ATP-dependent helicase RIS1 [Schizosaccharomyces japonicus yFS275]
          Length = 867

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 80/143 (55%), Gaps = 4/143 (2%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K++IFSQF + + ++   L   GI+F      M +S + +++  F+H  S   +L+   
Sbjct: 714  EKILIFSQFTQFLELLSVPLQREGIRFVVYDGSMSASQRDEAIHRFQHKESVQVMLVSLK 773

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S GL+L+    V L++P ++ S+EEQ I RA+R+G  R +HV  +    ++EE++   
Sbjct: 774  AGSTGLNLTAANHVVLLDPFYNPSVEEQAIDRAYRIGQKREVHVYRMITADSIEERIAAL 833

Query: 1111 LQDTDRCRRLLKEELVKPEREGA 1133
                ++ R L++  + + ER  A
Sbjct: 834  ---QEKKRGLVRSAMAEDERRSA 853



 Score = 61.2 bits (147), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 25/156 (16%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH---KKPSAHSLAWDYDVVITTFNR 670
           +  LIVV   L+  W  +IQ  V   Q    V+  H   K+         +DVV+TT+N 
Sbjct: 317 KTNLIVVSVALLHQWADEIQSKVAADQ-RFKVYVHHGSTKRDYDSYQMSQFDVVLTTYNT 375

Query: 671 LSAEWGRRKKS---------------PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISL 715
           ++ E+   K+                P ++  W R++LDE HT+ +   L        +L
Sbjct: 376 IAFEFKSYKRYQAKLAQDADAPSQSFPFLETVWYRILLDEAHTIRNHETLAAV--GCCAL 433

Query: 716 TASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAY 751
            AS RW LTGTP  N     +  L  +LKFL  + Y
Sbjct: 434 NASYRWCLTGTPIQN----HIGELYSLLKFLRVKPY 465


>gi|296122550|ref|YP_003630328.1| SNF2-related protein [Planctomyces limnophilus DSM 3776]
 gi|296014890|gb|ADG68129.1| SNF2-related protein [Planctomyces limnophilus DSM 3776]
          Length = 1112

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 3/143 (2%)

Query: 969  SNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSS 1028
            S+     K D+  P+LE       K ++FSQF   + ++ + L  AGI +   Y    + 
Sbjct: 940  SDEEGSAKLDVLIPHLEELVGEGHKTLVFSQFTSMLAIVRKHLDRAGITYE--YLDGQTR 997

Query: 1029 NKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMG 1087
            ++ + ++ F++D  C   L+   +  LGL+L+    VF+++P W+ ++E Q I RAHR+G
Sbjct: 998  DRKECVERFQNDKDCGVFLISLKAGGLGLNLTAADYVFILDPWWNPAVETQAIDRAHRVG 1057

Query: 1088 ATRPIHVETLAMRGTVEEQMLEF 1110
             TR +    L  + TVEE++ E 
Sbjct: 1058 QTRQVFAYRLICKNTVEEKIAEL 1080


>gi|34495520|ref|NP_899735.1| SWI/SNF family helicase [Chromobacterium violaceum ATCC 12472]
 gi|34101375|gb|AAQ57744.1| probable SWI/SNF family helicase [Chromobacterium violaceum ATCC
            12472]
          Length = 910

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 4/134 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++H+ ++ + L   G++F  +     S  +  S+D F+     L L+   + 
Sbjct: 758  KALVFSQFVDHLALVAEHLRQRGVRFHYLDGGTPSRQRKASMDAFQAGDGDLFLISLKAG 817

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
              GL+L+    V  ++P W+ ++E+Q   RA+RMG  RP+ V  L   GT+EE+++E  +
Sbjct: 818  GTGLNLTAADYVIHLDPWWNPAVEDQASDRAYRMGQQRPVTVYRLVAAGTIEEKIVELHR 877

Query: 1113 DTDRCRRLLKEELV 1126
            D    +R L + L+
Sbjct: 878  D----KRALADSLL 887


>gi|350412622|ref|XP_003489707.1| PREDICTED: transcription termination factor 2-like [Bombus
           impatiens]
          Length = 962

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 19/216 (8%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TL+V P+ L+  W+ +I +  + G L + V+    + +        DVVITT+N L  E
Sbjct: 440 GTLVVCPASLLSQWENEIDRRCKRGMLSVKVYHGTNRENVPKRLAKNDVVITTYNILLRE 499

Query: 675 WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNS 734
           +  +  S   ++HW R++LDE H + +  + +   Q    L A+ RW LTGTP  N    
Sbjct: 500 F--KSNSMAYKIHWERIILDEAHVIRN--HKSQASQSVCGLVANKRWALTGTPIQNKE-- 553

Query: 735 QLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ 794
               L P+LKFL    +  + + W     R  + +   GR RL  ++   M+   K +LQ
Sbjct: 554 --MDLYPILKFLKCTPFD-DLRVWK----RWVDNKSTAGRQRLATVMKTLMLRRTKQELQ 606

Query: 795 ------TIPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
                 ++P    E   +    E    Y ++++  R
Sbjct: 607 ANGMLESLPEKFVEEILIKLDPEEQLVYEKVLIYSR 642


>gi|383456088|ref|YP_005370077.1| SNF2/helicase domain-containing protein [Corallococcus coralloides
            DSM 2259]
 gi|380735185|gb|AFE11187.1| SNF2/helicase domain-containing protein [Corallococcus coralloides
            DSM 2259]
          Length = 1188

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 11/145 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            + ++FSQF  H+ ++ + L   G+ +  +     +  + + +  F+   + L L+   + 
Sbjct: 1024 RALVFSQFTSHLALVREVLDAQGVAYEYLDGSTPAGERAERVRAFQEGDAPLFLISLKAG 1083

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF-- 1110
              GL+L+  T V  ++P W+ ++E+Q   RAHR+G  RP+ V  L  RGT+EEQML    
Sbjct: 1084 GFGLNLTAATSVIHLDPWWNPAVEDQASDRAHRIGQQRPVTVYRLVARGTIEEQMLSLHE 1143

Query: 1111 ---------LQDTDRCRRLLKEELV 1126
                     L+  D   RL  +EL+
Sbjct: 1144 QKRALVAGVLEGKDAAARLSTQELL 1168


>gi|212535616|ref|XP_002147964.1| SNF2 family helicase, putative [Talaromyces marneffei ATCC 18224]
 gi|210070363|gb|EEA24453.1| SNF2 family helicase, putative [Talaromyces marneffei ATCC 18224]
          Length = 939

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 17/195 (8%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQL-HLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           ++  TLIV P  ++ +WK QI+ HV+P  +  + V+    K     L  DY VVIT++  
Sbjct: 384 ITAPTLIVSPVGVMSNWKQQIEMHVKPEFVPKILVYHGTGKKEGSKLK-DYGVVITSYGA 442

Query: 671 LSAEWGRRKK------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLL 723
           +++E+   KK      S +  + W R++LDEGHTL    N  +K  +A   L A +RW L
Sbjct: 443 IASEYDADKKKAKSTRSGLYSLKWRRIVLDEGHTL---RNPRSKGALAACHLEADSRWSL 499

Query: 724 TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
           TGTP  NT    L  L   ++FL      ++   ++  ++RP       G + +LQ L  
Sbjct: 500 TGTPIINT----LKDLYSQIRFLRLSGGLEDLAIFNAVLIRPLTNGETIG-ATILQALMG 554

Query: 784 CMISARKTDLQTIPL 798
            +   R+ D+  + L
Sbjct: 555 AICLRRRKDMAFVNL 569



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   + +IE  LT   ++F  +   ++S+ + +++  F +D  C  LL     
Sbjct: 773  KTVVFSQWTSFLDIIEPHLTANDVRFTRIDGKLNSNKRDQAIAEFSNDPKCKVLLASLNV 832

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             S+GL+L    +V L +  W  ++E+Q I R +R+G TR   V  L M G+VE+ +L+ 
Sbjct: 833  CSVGLNLVAANQVILCDSWWAPAIEDQAIDRVYRLGQTRETMVWRLVMEGSVEDNVLKI 891



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 29/118 (24%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATED--------GFYFYVNTVSGDIA 214
           MK +L  +Q+  + WML +E        P   ++  +D        G Y  + T   + A
Sbjct: 295 MKTQLLSYQRQGLAWMLEKE-------SPKLPEVGAKDVQLWKKEHGRYKNIAT---NYA 344

Query: 215 TGTAPTMRDFHGGMFCDEPGLGKTITALSLILK---------TQGTLADPPDGVKIIW 263
           T T P +    GG+  D+ GLGKTI  +SLI+          T  TL   P GV   W
Sbjct: 345 TSTPPPL--ASGGILADDMGLGKTIQTISLIMANSNADGNGITAPTLIVSPVGVMSNW 400


>gi|407404490|gb|EKF29921.1| DNA repair protein, putative [Trypanosoma cruzi marinkellei]
          Length = 984

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 2/123 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K+IIFSQF + + +I+  L  A +K   +   +  S +   L  F HD    A+L+   
Sbjct: 832  EKIIIFSQFGDMLELIQIWLKRASVKAVKLTGSLMLSQRQAVLQAFLHDPGVRAILISLK 891

Query: 1052 AS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A   GL+L     V L++P W+ ++E Q   RAHR+G T+P+HV    +  +VEE+M++ 
Sbjct: 892  AGGEGLNLQVANHVILVDPWWNPAVEMQAAQRAHRIGQTKPVHVVRFVVERSVEERMMD- 950

Query: 1111 LQD 1113
            LQD
Sbjct: 951  LQD 953


>gi|398833319|ref|ZP_10591454.1| DNA/RNA helicase, superfamily II, SNF2 family [Herbaspirillum sp.
            YR522]
 gi|398221749|gb|EJN08149.1| DNA/RNA helicase, superfamily II, SNF2 family [Herbaspirillum sp.
            YR522]
          Length = 847

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 70/118 (59%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            ++++FSQF E + V+EQ++   G+ +  +      + +   +  F+   + L L+   + 
Sbjct: 671  RILLFSQFTEMLAVVEQEVNALGLPYLMLTGQTDPAQRGAVIARFQQCQAPLLLVSLKAG 730

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             +GL+L+    V L +P W+ ++E+Q I+RAHR+G TR + V  L + G++EE++LE 
Sbjct: 731  GVGLNLTAADTVILADPWWNPAVEQQAIARAHRLGQTRQVFVYKLVIEGSIEERLLEL 788



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 98/227 (43%), Gaps = 28/227 (12%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           L R  L+VVP+ L+ +W+ Q  Q + P QL + V     +    +     D+V+TT+  L
Sbjct: 405 LDRPALVVVPTSLLFNWQ-QEAQRIAP-QLRVLVLHGDARGERFAQLDRADLVLTTYALL 462

Query: 672 SAEWGRRKKSPMMQVHWLRVMLDEGHTL----GSSLNLTNKLQMAISLTASNRWLLTGTP 727
              W  R    +    W  ++LDE  T+    G S     KLQ      A +R  +TGTP
Sbjct: 463 ---W--RDLHALAPQAWHLLVLDEAQTVKNAAGRSATAARKLQ------ARHRICMTGTP 511

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL-QLLHRCMI 786
             N     L  L     FL     G + +++     +P E + +  R+RLL Q +   ++
Sbjct: 512 LEN----HLGELWTQFHFLMPGFLG-DARSFSRLWRKPIEEQGQTVRARLLAQRVRPFIL 566

Query: 787 SARKTD-LQTIPLCIKEVTFLNFTEEHAGTYNELVVT----VRRNIL 828
             RK D LQ +P  I+ V  L         Y  + +     VRR +L
Sbjct: 567 RRRKQDVLQELPPRIEIVERLQLQGRQRALYESVRIAADKQVRRALL 613


>gi|116196398|ref|XP_001224011.1| hypothetical protein CHGG_04797 [Chaetomium globosum CBS 148.51]
 gi|88180710|gb|EAQ88178.1| hypothetical protein CHGG_04797 [Chaetomium globosum CBS 148.51]
          Length = 1110

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 13/210 (6%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           ++ATL+V P   V +W+ QI+QH++PG +   ++    +    +    +D+VITT+  + 
Sbjct: 528 AKATLLVCPLSTVTNWEEQIKQHIKPGTISYHIYHGPNRIKDVAQLAQFDLVITTYGSVV 587

Query: 673 AEWGRRKKS-----PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
           +E   R K      P+ ++ W R++LDE HT+     L    +    L A+ RW +TGTP
Sbjct: 588 SELNSRNKRKRGAYPLEEIGWFRIVLDEAHTIREQNTLA--FKSICRLQANRRWAVTGTP 645

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
             N      + L  +     +E     +  +   I++PF+A   E   +L  L+    + 
Sbjct: 646 VQNKLEDLAALLAFLRLKPFDE-----KSKFLQFIIQPFKAADPEIVPKLRVLIDTITLR 700

Query: 788 ARKTDLQTIPLCIKEVTFLNFTEEHAGTYN 817
             K  +  +P    EV  L+F+ E    Y+
Sbjct: 701 RLKDKIH-LPDRTDEVMRLDFSPEERQVYD 729



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 6/139 (4%)

Query: 983  NLESNKALPD----KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR 1038
            N E +   PD    K ++FS +  H+ +I+  L  AGI +  +   M  + +  ++D FR
Sbjct: 939  NKEQSALYPDEPPFKSVVFSGWTSHLDLIQIALDNAGITYTRLDGKMTRTARNAAMDAFR 998

Query: 1039 HDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
             D S   +L+   +  LGL+L+    V++MEP ++ + E Q + R HR+G TR +     
Sbjct: 999  DDHSVQVILVSIMAGGLGLNLTAGNSVYVMEPQFNPAAEAQAVDRVHRLGQTRAVRTVRF 1058

Query: 1098 AMRGTVEEQMLEFLQDTDR 1116
             M+ + EE+ML+ LQD  +
Sbjct: 1059 IMKDSFEEKMLQ-LQDKKK 1076


>gi|402086339|gb|EJT81237.1| hypothetical protein GGTG_01221 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 1165

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 12/135 (8%)

Query: 605 LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVV 664
           L + +++LSRATL +VP+ L+  W+ +I +H     + +      + P   +LA  Y++V
Sbjct: 386 LPATKVFLSRATLALVPANLLQQWRDEIAKHTSGLSVLVLAIGGREIPDTTALA-KYELV 444

Query: 665 ITTFNRLSAEWGRRKK---------SPMMQVHWLRVMLDEGHTLGSSL--NLTNKLQMAI 713
           I +  R      +R           SP+ QVH+ R+++DEGH LG+S   N +N LQ+  
Sbjct: 445 IFSIPRFERLHEQRVANENGAWTLDSPLAQVHFKRIIVDEGHRLGNSRIGNKSNMLQILE 504

Query: 714 SLTASNRWLLTGTPT 728
            + AS RW++TGTP+
Sbjct: 505 HIQASARWIVTGTPS 519



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 6/106 (5%)

Query: 1025 MHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRA 1083
            + +  + + +  F    +   +LMD   A+ GLD+   +R++ + P+ +  +E Q I R 
Sbjct: 952  LAAQRRAQYVATFNESPTFRVMLMDLTQAAFGLDMRSASRIYFINPVLNPQVEAQAIGRV 1011

Query: 1084 HRMGATRPIHVETLAMRGTVEEQMLEFLQDT-----DRCRRLLKEE 1124
             R+   + + VETL +RGT+EE ++E  +D       +C+ LL ++
Sbjct: 1012 RRISQNKAVTVETLVLRGTLEEVVVERRKDMTQAEHQKCKSLLDDK 1057


>gi|432951126|ref|XP_004084734.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Oryzias latipes]
          Length = 1675

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 124/286 (43%), Gaps = 58/286 (20%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP---SAHSLAWDYDVVITTFNRL 671
           ATLI+ PS +   W  +I +H+R   L + V+   KK      H LA   DVVITT++ L
Sbjct: 711 ATLIISPSSICHQWVEEINRHIRSASLRVLVYQGVKKHGFIQPHVLA-QQDVVITTYDVL 769

Query: 672 SAEW------------GRRKK---------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQ 710
            +E             GRR +         SP++ V W RV LDE   +          +
Sbjct: 770 RSELNYIDIPHSNSRDGRRFRNQKRYMAVPSPLVAVEWWRVCLDEAQMV--ECPTAKAAE 827

Query: 711 MAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF-EAE 769
           MA+ L + NRW ++GTP        L  L  ++ FL  + Y      WD  + RP+    
Sbjct: 828 MALRLASVNRWCVSGTPV----QRGLEDLYGLVLFLGVDPYWVKH-WWDQLLYRPYRRGN 882

Query: 770 MEEGRSRLLQLLHRCMISARK--TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI 827
            E   S + Q+L R   SA+K   D   IP   +EV +L+F+      Y+       R+ 
Sbjct: 883 TEPLYSVIAQILWR---SAKKDVIDQIQIPPQTEEVHWLHFSPVEGHFYHRQHEVCSRDA 939

Query: 828 L-----MADWN------DPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
           L     ++DW+      D   V+S+L P         +  LR +CC
Sbjct: 940 LVKLRKISDWSLKLGSLDRRTVDSILYP---------LLRLRQACC 976



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 68/125 (54%), Gaps = 4/125 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FS +   + +I + L    ++F+ + + +H   +  +L  F+++     LL+   +
Sbjct: 1522 KCLVFSTWQSVLDIIAKALFDNSLEFSQI-NGIHKFQE--NLSSFKYEEKINILLLPLHT 1578

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S GL++   T V L+EPI + + E Q I R HR+G T+P  V    ++ T+EE+M   L
Sbjct: 1579 GSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTFVHRFLIKSTIEERMQAML 1638

Query: 1112 QDTDR 1116
            +  ++
Sbjct: 1639 KTQEK 1643



 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)

Query: 158 SIMPCMKLKLFPHQQAAVEWMLHREWNAEVLR-----HPLYIDLATEDGFYFYVNTVSGD 212
           +++P ++L    +Q  AV WML RE +          H L+ +L T  G   + N  +G 
Sbjct: 274 ALIPVLRL----YQSQAVNWMLRREKHRSCAPKDPSLHFLWRELLTLCGKKLFYNPFTGC 329

Query: 213 IATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
           +      +  ++ GG+  DE GLGKT+  L+LIL
Sbjct: 330 LMREFPLSGIEWPGGILADEMGLGKTVEVLALIL 363


>gi|353242505|emb|CCA74144.1| related to RIS1-similarity to RAD5 protein [Piriformospora indica DSM
            11827]
          Length = 861

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 72/126 (57%), Gaps = 2/126 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K IIFS+F   + ++   L    I++      M+++ + +S+DM   D     +L+   A
Sbjct: 705  KTIIFSEFTSMLDIVAAVLDEERIRYVRYQGSMNAAQRQQSIDMLNSDRRVKVILISTKA 764

Query: 1053 -SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             + GL+L+    V +M+P W+ ++E+Q   RAHR+G TR +++  L +  TVEE++LE L
Sbjct: 765  GNSGLNLTVCNNVIMMDPWWNPAIEDQAFDRAHRLGQTRDVNIYKLMVPDTVEERILE-L 823

Query: 1112 QDTDRC 1117
            Q+  R 
Sbjct: 824  QEKKRA 829



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 108/264 (40%), Gaps = 78/264 (29%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTFN 669
           ++ TLI+V   ++  W    ++ VR     L V   H  PS     +D   YDVV+TT++
Sbjct: 328 AKGTLIIVGLNILGQW----EKEVRKFNPSLRVLA-HHGPSRTKSEYDLERYDVVLTTYD 382

Query: 670 RLSAEWG------------------------------------------RRKKSPMMQVH 687
            LS E                                            + K S + +V 
Sbjct: 383 VLSNEHSAYQGGVEVSSKGTKQNSSEDSDDGFGGAIRARKEAAPKPKKVKEKGSALFKVD 442

Query: 688 WLRVMLDEGHTLGSSLNLTNKLQMAIS-LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           W RV++DE   +    N ++K  +A+S L +  RW+LTGTP  N    Q+  L P+ +FL
Sbjct: 443 WYRVVVDEAQNIK---NRSSKRSLAVSALNSKYRWILTGTPIQN----QVDDLFPLFRFL 495

Query: 747 HEEAYGQNQKAWDGGILRPFEAEMEE----GRS-----RLLQLLHRCMISARKTDLQTIP 797
             +   +    WD      F A++ E    GRS     RL  +L   M+   K D++ + 
Sbjct: 496 RIKPLHE----WDE-----FNAKIREPLSRGRSGTAMKRLHHILSTIMLRRLKADVKELN 546

Query: 798 LCIK--EVTFLNFTEEHAGTYNEL 819
           L  +  EVT   F E     Y+++
Sbjct: 547 LPARNVEVTECEFEEAEQFVYDQI 570


>gi|355559959|gb|EHH16687.1| hypothetical protein EGK_12015 [Macaca mulatta]
          Length = 978

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 23/160 (14%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           R TLI+ P  ++ +W  Q  QH++   +H                  YD+V+TT+N L+ 
Sbjct: 476 RTTLIICPLSVLSNWIDQFGQHIK-SDVHFHF---------------YDIVLTTYNILTH 519

Query: 674 EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
           ++G +  SP+  + WLRV+LDEGH + +      + +  + L +  RW+LTGTP  N+  
Sbjct: 520 DYGTKGDSPLHSIRWLRVILDEGHAIRNP--NAQQTKAVLDLESERRWVLTGTPIQNS-- 575

Query: 734 SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEG 773
             L  L  +L FL  + +  +++ W   I RP     E G
Sbjct: 576 --LKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGG 612



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS---CLALLMD 1049
            K ++ SQF   + +IE  L  +G  F  +   M    +++S+  F++  +    + LL  
Sbjct: 822  KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSL 881

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+LS  +RVFLM+P W+ + E+Q   R HR+G  + + +    ++ +VEE ML+
Sbjct: 882  KAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLK 941

Query: 1110 FLQDTDR 1116
             +Q+  R
Sbjct: 942  -IQNKKR 947



 Score = 48.9 bits (115), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 10/80 (12%)

Query: 167 LFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHG 226
           L PHQ+ A+ WM+ RE + E+   P +     E     Y NT++ + +    P   + HG
Sbjct: 240 LLPHQKQALAWMVSRENSKEL--PPFW-----EQRNDLYYNTIT-NFSEKDRP--ENVHG 289

Query: 227 GMFCDEPGLGKTITALSLIL 246
           G+  D+ GLGKT+TA+++IL
Sbjct: 290 GILADDMGLGKTLTAIAVIL 309


>gi|324508390|gb|ADY43542.1| Transcription termination factor 2, partial [Ascaris suum]
          Length = 693

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 49/240 (20%)

Query: 600 ALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW--TDHKKPSAHSL 657
           ALC+     RL  SRATL++ P+ L+  W+ +I +HV+ G+L + ++     K+      
Sbjct: 101 ALCDN----RLIPSRATLVIAPASLIFQWEAEIDRHVKAGRLTVLIFHGAKQKREDDPRR 156

Query: 658 AWDYDVVITTFNRLSAEWG-------------------------RRK--KSP---MMQVH 687
              YDVVITT+N L++E G                         RRK  K+P   + ++ 
Sbjct: 157 MARYDVVITTYNLLASELGEKPTILGGSDSDSDDGGVVRPKVAIRRKIAKNPGSVLAKIA 216

Query: 688 WLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
           W R++LDE H + +  +L +K      L A++RW LTGTP  N    +L  L  +++FL 
Sbjct: 217 WDRIVLDEAHQIKNKTSLASK--ACCRLAAASRWCLTGTPIHN----KLWDLFSLVRFLR 270

Query: 748 EEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLN 807
              + + +  W   I+     + +   +RL  L+   ++  R+T  Q  P  +K +  L 
Sbjct: 271 VTPFDE-EAVWKEWIM----GQSQTSANRLNTLIKGLLL--RRTKDQICPHSLKPIVDLK 323



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 11/178 (6%)

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF-RHDAS 1042
            L+   AL DK +I SQ+   + ++E  L    +++  +   + + ++   ++ F R    
Sbjct: 497  LDQALALGDKCVIVSQWTSLLDIVEYHLKQRDVQYTSITGKVLTKDRQPRVESFNRVGGG 556

Query: 1043 CLALLMDGSASLGLDLSFVT-RVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRG 1101
               +L+  +A            +FL++  W+ ++E+Q   R +RMG T+ + +  +   G
Sbjct: 557  ARVMLLSLTAGGVGLNLVGGNHLFLIDLHWNPALEQQACDRIYRMGQTKEVFIHKIICLG 616

Query: 1102 TVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHR-TLHDFAESNYLSHLSFVRTNS 1158
            T+EE++L   Q         K  L K   EGA S + +    A+  YL  L     N+
Sbjct: 617  TIEERVLTLQQS--------KMALAKGVLEGAASKKLSKLTMADLKYLFELGHPVANT 666


>gi|430741141|ref|YP_007200270.1| DNA/RNA helicase [Singulisphaera acidiphila DSM 18658]
 gi|430012861|gb|AGA24575.1| DNA/RNA helicase, superfamily II, SNF2 family [Singulisphaera
            acidiphila DSM 18658]
          Length = 1211

 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 3/138 (2%)

Query: 976  KQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLD 1035
            K D+  P L        K ++FSQF   + +++ +L   G+++   Y    + N+   ++
Sbjct: 1046 KLDMLLPQLSEVVEEGHKTLVFSQFTSFLAIVKDRLDKEGLRYE--YLDGRTRNRADRVE 1103

Query: 1036 MFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
             F++D  C   L+   +  LGL+L+    V+L++P W+ ++E Q I R+HR+G T+ +  
Sbjct: 1104 RFQNDPDCPIFLISLKAGGLGLNLTAAEYVYLLDPWWNPAVEAQAIDRSHRIGQTQRVFA 1163

Query: 1095 ETLAMRGTVEEQMLEFLQ 1112
              L  R TVEE++LE  Q
Sbjct: 1164 YRLVCRDTVEEKILELQQ 1181


>gi|212531233|ref|XP_002145773.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Talaromyces
            marneffei ATCC 18224]
 gi|210071137|gb|EEA25226.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Talaromyces
            marneffei ATCC 18224]
          Length = 1177

 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 4/133 (3%)

Query: 985  ESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCL 1044
            ES K   +K IIFSQF   + ++E  +   G K+      M+   + +S+  F     C 
Sbjct: 1018 ESGKG--EKTIIFSQFTSLLDMLEVPINRRGWKYRRYDGSMNPRERNESVLEFTDKPDCD 1075

Query: 1045 ALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTV 1103
             +L+   + + GL+L   ++V + +P W+  +EEQ I RAHR+G TRP+ V  + +  TV
Sbjct: 1076 IMLVSLKAGNAGLNLVAASQVIIFDPFWNPYIEEQAIDRAHRLGQTRPVQVHRILVEKTV 1135

Query: 1104 EEQMLEFLQDTDR 1116
            E+++LE LQD  R
Sbjct: 1136 EDRILE-LQDKKR 1147



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 38/224 (16%)

Query: 590 LAFDLAALRLALCEP-LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWT 647
           L   + AL L +  P  D  R    + TLI+ P  L+  WK +I + ++P  +L +F+  
Sbjct: 478 LGKTVQALSLVVARPSTDPSR----KTTLIIAPVALMQQWKREIDRLIKPEHKLSVFILH 533

Query: 648 DHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVH-------------------- 687
             K+ +A      +DVV+TTF  +  E  +R++   M+                      
Sbjct: 534 GEKRKTAFDKLKRFDVVLTTFGSMGTELKKREQFDEMRRFAQSNANLIAEARGLPLLGPD 593

Query: 688 --WLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLK 744
             W RV++DE   +    N   K  +A  SL A+ RW ++GTP  N     +  L  +L+
Sbjct: 594 STWYRVIIDEAQCIK---NRNTKAALACYSLNATYRWCMSGTPMMNG----VHELHSLLR 646

Query: 745 FLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISA 788
           FL    Y  +   ++    RP +   +E ++R L  L R ++ A
Sbjct: 647 FLRIGPYN-SLPLFNSTFTRPLKGSNKEDQTRALTQL-RVVLKA 688


>gi|158341292|ref|YP_001522344.1| SNF2 family helicase [Acaryochloris marina MBIC11017]
 gi|158311533|gb|ABW33144.1| helicase, SNF2 family [Acaryochloris marina MBIC11017]
          Length = 1406

 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 68/118 (57%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++H+ +I + L    I++  +     + N+ K +D F+     + L+   + 
Sbjct: 1256 KALVFSQFVDHLEIIRRYLDEQQIQYQYLDGSTPAKNRHKRVDAFQAGEGEIFLISLKAG 1315

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+    V  M+P W+ ++E+Q   RAHR+G  RP+ +  L  +GT+EE+++E 
Sbjct: 1316 GTGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAKGTIEEKIVEL 1373


>gi|338214484|ref|YP_004658545.1| SNF2-like protein [Runella slithyformis DSM 19594]
 gi|336308311|gb|AEI51413.1| SNF2-related protein [Runella slithyformis DSM 19594]
          Length = 981

 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 7/156 (4%)

Query: 981  RPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHD 1040
            +  LE   A   KV+IFSQF+ H+ ++ Q L    I++A  Y    ++++   +++F+  
Sbjct: 821  QAKLEELLAGDHKVLIFSQFIRHLSILRQYLDEKNIRYA--YLDGSTADRQAQVELFQEK 878

Query: 1041 ASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAM 1099
                  L+   A  LGL+L+    VF+++P W+ ++E Q I RAHR+G  R +       
Sbjct: 879  EEIKIFLISLRAGGLGLNLTAADYVFILDPWWNPAIEAQAIDRAHRIGQQRTVFTYKFIT 938

Query: 1100 RGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARS 1135
            + +VEE++L    D  R ++ L  EL+  E    +S
Sbjct: 939  KNSVEEKIL----DLQRSKQKLFNELITTEESFVKS 970



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 22/220 (10%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           R +L+V+P+ L+ +W  Q++      QL + V+T   +    +    YD+++T++  +  
Sbjct: 572 RPSLLVMPTSLLYNW--QLEARRFTPQLRVLVYTGTYRDKNPAQFDGYDLILTSYGIVRI 629

Query: 674 EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
           +    K  P    H+  ++LDE   + +  +   K  M   L A +R +LTGTP  NT  
Sbjct: 630 DIDLLKTYPF---HY--IILDESQAIKNPSSHITKAVM--QLEARHRLILTGTPLENTTM 682

Query: 734 ---SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS-RLLQLLHRCMISAR 789
              +Q++ + P L  L  ++Y ++          P E   +E RS +L  L+   ++   
Sbjct: 683 DLWTQMTFVNPGL--LGSQSYFRSH------FQVPIEKHNDEKRSQKLYALIKPFLLRRH 734

Query: 790 KTDLQ-TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL 828
           K+ +   +P  ++ V + +  EE    Y E     R  IL
Sbjct: 735 KSQVALDLPSKVESVHYCDMAEEQEKRYEETKSYYRNYIL 774


>gi|425767599|gb|EKV06168.1| putative swi2/snf2-like protein [Penicillium digitatum PHI26]
 gi|425780221|gb|EKV18237.1| putative swi2/snf2-like protein [Penicillium digitatum Pd1]
          Length = 885

 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 114/475 (24%), Positives = 196/475 (41%), Gaps = 62/475 (13%)

Query: 685  QVHWLRVMLDEGHTLGSSLNLTNKL-QMAISLTASNRWLLTGTPTPNTPNSQLSHLQPML 743
            Q  W  +++DEGH L    N+  KL +  ++  ++NR L+TGTP  N     +S L  +L
Sbjct: 346  QYQWRYIVVDEGHRLK---NMNCKLIKELLTYNSANRLLITGTPLQNN----ISELWSLL 398

Query: 744  KFLHEEAYGQNQKAWDG-----GIL-RPFEAEMEEGRSRLL-----QLLHRCMISARKTD 792
             FL  E +  +  +++G      +L    +A + E R R L      +L   ++   KTD
Sbjct: 399  HFLLPEVFN-DLNSFEGWFDFSSVLDNKGQAGLVEKRKRNLVTSMHAILKPFLLRRLKTD 457

Query: 793  LQT-IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRS 851
            ++T +P   + + +   T E    Y E++    R  L     +   +E L +      RS
Sbjct: 458  VETNLPKKREYILYAPLTPEQKDLYREIINGTGRQYL-----EGKALERLESKSGSSTRS 512

Query: 852  TTIRNLRLSCCVAGHIKVTDAGEDIQETMDVLVENGLDPLSQEYAFIKYNLLNGGNCLRH 911
             +++  R         K T +       ++    N    ++++     YN L+ G    H
Sbjct: 513  QSMKRKRHGNDETRPAKSTRSSGISTPAINGNNPNRRRRITRQ----SYNDLSDGEFDEH 568

Query: 912  ILCLDCVAMDSEKCSLPGCGFLYEMQSPEIL---------TRPENP------------NP 950
            +  L+    + E    P    L EMQ  E L          + +NP            N 
Sbjct: 569  LRKLELGIEEEEMKLEPSDTELEEMQRAENLKLAKKEIGQKKMQNPVLQARLACNSPHNF 628

Query: 951  KWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQ 1010
             WP   +   +  S    S     L + L    LE       K++IFSQF   + +IE+ 
Sbjct: 629  YWPWVDESSSVDESLVSASGKMLLLDR-LVSCLLEKGH----KILIFSQFKTQLDIIEEW 683

Query: 1011 LTVAG----IKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFL 1066
            +T        +  G  +      +IK+ +  ++    L LL   +   G++L+    V +
Sbjct: 684  ITTLRSWECCRIDGAIAQSERQAQIKNFNTKKNHK--LFLLSTRAGGQGINLTAADTVII 741

Query: 1067 MEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLL 1121
             +  W+   + Q   RAHR+G T+P+ +  LA +GTVE+ +LE      R  RL+
Sbjct: 742  FDSDWNPQQDLQAQDRAHRIGQTKPVIIYRLATKGTVEQTLLEKADSKRRLERLV 796


>gi|321262907|ref|XP_003196172.1| DNA repair protein RAD5 [Cryptococcus gattii WM276]
 gi|317462647|gb|ADV24385.1| DNA repair protein RAD5, putative [Cryptococcus gattii WM276]
          Length = 1359

 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 1/121 (0%)

Query: 988  KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALL 1047
            K +  K I+FSQ+   +  I   L    I++A +   M    + +++D  RH  +   LL
Sbjct: 1203 KPVVTKSIVFSQWTTMLDRIADMLDETNIRYARLDGTMTRDERSRAIDALRHKKNVEVLL 1262

Query: 1048 MDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQ 1106
            +   A  +GL+L+  +R +L++P W+ S+E Q I R HRMG TRP+    L ++ ++EE+
Sbjct: 1263 VSTRAGGVGLNLTVASRCYLVDPYWNPSVESQAIDRIHRMGQTRPVVAIKLMIKDSIEEK 1322

Query: 1107 M 1107
            +
Sbjct: 1323 L 1323


>gi|384489975|gb|EIE81197.1| hypothetical protein RO3G_05902 [Rhizopus delemar RA 99-880]
          Length = 927

 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 1/120 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            DK IIF+QF   + ++E+ L   G ++      M    +  +++MF  D +   LL+   
Sbjct: 767  DKTIIFTQFTTMLDLLERPLQGKGHRYLRYDGSMDIKQRANTVNMFFDDPNIKVLLVSTK 826

Query: 1052 -ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              SLGL+L+   RV L++  W+ ++E Q I R HR+G T+ +HV  + ++ TVE+++LE 
Sbjct: 827  CGSLGLNLTCANRVILLDVWWNPAIENQAIDRVHRIGQTKSVHVHRIFIKDTVEDRILEL 886



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 23/170 (13%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           + TLIV P  L+D W+ +++    P  L + ++  + + +       YDV+IT++   + 
Sbjct: 365 KTTLIVCPVSLIDQWRREVESKTSPS-LKVLIYHGNNRITNPYHIIPYDVMITSYTIAAT 423

Query: 674 EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
           ++   +K P+ +V + RV+LDE HT+ +    T   +    L A+ RW +T TP  N   
Sbjct: 424 DFFAVRKGPLSKVKFHRVILDEAHTIKN--QRTKAARACCDLEATYRWCMTATPVQN--- 478

Query: 734 SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
            ++  L  ++KFL                +RPF  E EE R  + + + R
Sbjct: 479 -KVEELYSLIKFLR---------------IRPF-CEWEEFRDAISKPIKR 511


>gi|58258561|ref|XP_566693.1| DNA repair protein RAD5 [Cryptococcus neoformans var. neoformans
            JEC21]
 gi|338819260|sp|P0CQ66.1|RAD5_CRYNJ RecName: Full=DNA repair protein RAD5
 gi|57222830|gb|AAW40874.1| DNA repair protein RAD5, putative [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1198

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 70/120 (58%), Gaps = 2/120 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF-RHDASCLALLMD-G 1050
            K ++FSQF   + +IE  LT  GI++      M  + +  +++ F R     L LL+   
Sbjct: 1037 KALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFGRKTNEPLILLISLK 1096

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +  +GL+L+    VFLM+  W+ ++E+Q I R HR+G  +P++V    ++GTVE+++++ 
Sbjct: 1097 AGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIMKI 1156



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 30/252 (11%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHS-LAWD----YDVVITTF 668
           RATL+V P  L   W  ++++  + G ++ +VW    +    + LA D     DV++T++
Sbjct: 594 RATLVVCPVSLAAQWHDELRKMSQQGSINSYVWYGGDRVDIEALLAGDGKERVDVIVTSY 653

Query: 669 NRLSAE---WGRRKKSP------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
             L++E   W R K  P      +    +LR++LDE H + + L + +K      L    
Sbjct: 654 GTLTSEYQKWLRTKDRPNYEGGSLYDHEFLRIVLDEAHNIRNRLAMVSK--ACYELKGQR 711

Query: 720 RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ 779
           RW LTGTP  N    +L  L  +L FL    +G N   +   +  PF  +  +  + +  
Sbjct: 712 RWALTGTPIVN----RLEDLYSLLHFLRITPWG-NYSFFRSFVTVPFLNQDHKALNVVQY 766

Query: 780 LLHRCMISARKTD-------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI--LMA 830
           +L  C++   KT        +  +P    E+  L F+      Y  L    ++    L A
Sbjct: 767 ILESCLLRREKTMRDKDGRLIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFIDLDA 826

Query: 831 DWNDPSHVESLL 842
           D    S+  S+L
Sbjct: 827 DGRAMSNYTSIL 838


>gi|344230413|gb|EGV62298.1| hypothetical protein CANTEDRAFT_131662 [Candida tenuis ATCC 10573]
          Length = 1295

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 79/137 (57%), Gaps = 13/137 (9%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH----DASCLALLM 1048
            K I+F +F +  + + + L + G+ +    + ++++++ ++L  F +    D   + LLM
Sbjct: 1028 KSIVFFEFEDSAYYLTELLDILGVNYILYATFINTTHRAENLSEFSNYNSEDNGGITLLM 1087

Query: 1049 DGS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            D   A+ GL +   T V+ + P+W RS+E Q I RAHR+G T+ +HVETL +  T+EE++
Sbjct: 1088 DLRLAAHGLTIIAATNVYFISPVWQRSVEAQAIKRAHRIGQTKEVHVETLVLEDTLEEEI 1147

Query: 1108 LEFLQDTDRCRRLLKEE 1124
             +        RRL ++E
Sbjct: 1148 YK--------RRLSQQE 1156



 Score = 70.1 bits (170), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 16/133 (12%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLH-LFVWTDHKK--PSAHSLAWD------ 660
           LY    TLIVVP  L   W T++++H++P  L  LF+    KK   S + +  +      
Sbjct: 472 LYFCNTTLIVVPDNLFHQWNTELRKHIQPHFLRKLFISNQFKKLLVSENGVFTNEVYEDP 531

Query: 661 -----YDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISL 715
                +D+++ + + LS ++  R  +P+M++ W R+++DEGH++ S ++    L     +
Sbjct: 532 IQLIQFDLIVISNSILSKQFDERDDTPLMKIFWKRLIIDEGHSMTSKVSRAGLL--CREM 589

Query: 716 TASNRWLLTGTPT 728
               RW +TGTPT
Sbjct: 590 NVERRWAVTGTPT 602


>gi|253700367|ref|YP_003021556.1| SNF2-related protein [Geobacter sp. M21]
 gi|251775217|gb|ACT17798.1| SNF2-related protein [Geobacter sp. M21]
          Length = 1386

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 11/145 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF+ H+ +I Q +   GI +  +        + + +D F+  +  L L+   + 
Sbjct: 1237 KALVFSQFVGHLELIRQYVEKNGIPYQYLDGSTPPQERKRRVDAFQSGSGDLFLISLKAG 1296

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML---- 1108
             +GL+L+    V  M+P W+ ++E+Q   RAHR+G  RP+ +  L  RGT+EE+++    
Sbjct: 1297 GVGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQKRPVTIYRLVTRGTIEEKIVGLHQ 1356

Query: 1109 -------EFLQDTDRCRRLLKEELV 1126
                     L ++D   R+  EEL+
Sbjct: 1357 QKRGLADSLLDESDLSGRISAEELL 1381


>gi|134106523|ref|XP_778272.1| hypothetical protein CNBA2720 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|338819259|sp|P0CQ67.1|RAD5_CRYNB RecName: Full=DNA repair protein RAD5
 gi|50260975|gb|EAL23625.1| hypothetical protein CNBA2720 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 1198

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 70/120 (58%), Gaps = 2/120 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF-RHDASCLALLMD-G 1050
            K ++FSQF   + +IE  LT  GI++      M  + +  +++ F R     L LL+   
Sbjct: 1037 KALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFGRKTNEPLILLISLK 1096

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +  +GL+L+    VFLM+  W+ ++E+Q I R HR+G  +P++V    ++GTVE+++++ 
Sbjct: 1097 AGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIMKI 1156



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 28/239 (11%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHS-LAWD----YDVVITTF 668
           RATL+V P  L   W  ++++  + G ++ +VW    +    + LA D     DV++T++
Sbjct: 594 RATLVVCPVSLAAQWHDELRKMSQQGSINSYVWYGGDRVDIEALLAGDGKERVDVIVTSY 653

Query: 669 NRLSAE---WGRRKKSP------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
             L++E   W R K  P      +    +LR++LDE H + + L + +K      L    
Sbjct: 654 GTLTSEYQKWLRTKDRPNYEGGSLYDHEFLRIVLDEAHNIRNRLAMVSK--ACYELKGQR 711

Query: 720 RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ 779
           RW LTGTP  N    +L  L  +L FL    +G N   +   +  PF  +  +  + +  
Sbjct: 712 RWALTGTPIVN----RLEDLYSLLHFLRITPWG-NYSFFRSFVTVPFLNQDHKALNVVQY 766

Query: 780 LLHRCMISARKTD-------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMAD 831
           +L  C++   KT        +  +P    E+  L F+      Y  L    ++  +  D
Sbjct: 767 ILESCLLRREKTMRDKDGRLIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFIELD 825


>gi|310800518|gb|EFQ35411.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001]
          Length = 1150

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +IE  LT A IKF  +   M    +   L+ F+   +   LL+   A
Sbjct: 1000 KSVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNEFQESKTFTVLLLSLRA 1059

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +GL+L+   RVF+M+P W  ++E Q I R HRMG    + V    ++ +VEE+ML
Sbjct: 1060 GGVGLNLTSAKRVFMMDPWWSFAVEAQAIDRVHRMGQDEEVKVYRFIVKESVEERML 1116



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 22/195 (11%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS-------AHSLAWDYDVVITTF 668
           TL+V P  L+  W+++ ++  + G L   V+  ++K S         S A   DVVIT++
Sbjct: 578 TLVVAPMSLLSQWQSEAEKASKEGTLKAMVYYGNEKASNLQAVCCTASAASAPDVVITSY 637

Query: 669 NRLSAEWGRRKKSPM--------MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
             + +E+ +     M          +++ RV+LDE H + +  + T K    IS  A +R
Sbjct: 638 GVVLSEFSQVASKKMDKSAHTGIFSLNFFRVILDEAHHIKNRGSKTAKACYEIS--AQHR 695

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W+LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE++       ++Q 
Sbjct: 696 WVLTGTPIVN----KLEDLFSLVRFLRVEPWN-NFSFWKTFITVPFESKDFMRALDVVQT 750

Query: 781 LHRCMISARKTDLQT 795
           +   ++  R  D++T
Sbjct: 751 VLEPLVLRRTKDMKT 765



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 17/98 (17%)

Query: 165 LKLFPHQQAAVEWMLHREW----NAEVLRHPLYIDLA-------------TEDGFYFYVN 207
           + L P+Q+ A+ WM+ +E     N E   HPL+ + A              ++  +FYVN
Sbjct: 440 MNLRPYQKQALHWMMTKEKDQKSNREPSMHPLWEEYAWPLKDTDDKELPQVQNQQHFYVN 499

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             SGD++       ++  GG+  DE GLGKTI  LSL+
Sbjct: 500 PYSGDLSLDFPVQEQNCLGGILADEMGLGKTIQMLSLV 537


>gi|398391538|ref|XP_003849229.1| SNF2 family DNA-dependent ATPase domain-containing protein
           [Zymoseptoria tritici IPO323]
 gi|339469105|gb|EGP84205.1| SNF2 family DNA-dependent ATPase domain-containing protein
           [Zymoseptoria tritici IPO323]
          Length = 1070

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 16/220 (7%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           L  ++ATLI+ P  ++ +W  QI  H  PG +  +V+    +          DVV+T++N
Sbjct: 479 LVNAKATLIICPKSVLSNWTEQIGAHSVPGMIKSYVYHGPGRTQDLEFLAAQDVVLTSYN 538

Query: 670 RLSAEW--GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
             +AE+  G  KK  +  + W R++LDE H  G     T   +   +L A  RW +TGTP
Sbjct: 539 TAAAEFGDGMGKKKALSSITWFRIVLDEAH--GIRTQSTQVSKACCALKAERRWAVTGTP 596

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ---LLHRC 784
             N     LS L  ++KFL  + +  N   W+  I     A+ + G   +L+   LL   
Sbjct: 597 IQNG----LSDLGTLVKFLRIKPFDDNH-TWNQHI----NAKFKTGDVSVLEQLKLLVGS 647

Query: 785 MISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
           +   R+ D   +   ++    L+ + +    YN    T R
Sbjct: 648 ITLRREKDTVIVGKRVQTRVRLDPSPDEELLYNRFAKTSR 687



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 71/131 (54%), Gaps = 1/131 (0%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P + ++FS +  ++ +IE  L    I F  +   M    +  +L++F+++ +   LL   
Sbjct: 916  PVRSVVFSGWTSYLDLIEYALMRENIGFVRLDGTMSVKTRTANLNIFKNNDNITVLLASI 975

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +A  GL+L+   +V++MEP ++  +EEQ + R HR+G  R + +    M+G+VEE +L+
Sbjct: 976  KAAGQGLNLTSANKVYVMEPQFNPGVEEQAVDRVHRLGQKRDVEIVHYIMKGSVEEGILK 1035

Query: 1110 FLQDTDRCRRL 1120
              +      +L
Sbjct: 1036 LQEKKKNLAKL 1046


>gi|321251541|ref|XP_003192100.1| DNA repair protein RAD16; Rad16p [Cryptococcus gattii WM276]
 gi|317458568|gb|ADV20313.1| DNA repair protein RAD16; Rad16p [Cryptococcus gattii WM276]
          Length = 1202

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 70/120 (58%), Gaps = 2/120 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF-RHDASCLALLMD-G 1050
            K ++FSQF   + +IE  LT  GI++      M  + +  +++ F R     L LL+   
Sbjct: 1041 KALVFSQFTSFLDLIETTLTKQGIRWLRFDGTMSQAQRASTIEEFGRKTNEPLILLISLK 1100

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +  +GL+L+    VFLM+  W+ ++E+Q I R HR+G  +P++V    ++GTVE+++++ 
Sbjct: 1101 AGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIMKI 1160



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 28/240 (11%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSL-----AWDYDVVITT 667
           +RATL+V P  L   W  ++++  + G ++ ++W    +    +L         DV++T+
Sbjct: 597 TRATLVVCPVSLAAQWHDELRKMSQQGSINSYMWYGGDRVDIEALLAGEGKEKVDVIVTS 656

Query: 668 FNRLSAE---WGRRKKSPMMQV------HWLRVMLDEGHTLGSSLNLTNKLQMAISLTAS 718
           +  LS+E   W R K  P  +        +LR++LDE H + + L + +K      L   
Sbjct: 657 YGTLSSEYQKWLRNKDKPNYEGGSVYDHEFLRIVLDEAHNIRNRLAMVSK--ACYELKGQ 714

Query: 719 NRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLL 778
            RW LTGTP  N    +L  L  +L FL    +G +   +   +  PF  +  +  + + 
Sbjct: 715 RRWALTGTPIVN----RLEDLYSLLHFLRVTPWG-DYPFFRSFVTVPFLNQDHKALNVVQ 769

Query: 779 QLLHRCMISARKTD-------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMAD 831
            +L  C++   KT        +  +P    E+  L F+      Y  L    ++  +  D
Sbjct: 770 YILESCLLRREKTMRDKDGRLIVDLPPKTVEIKVLQFSRTERQIYKFLEERAKKRFIELD 829


>gi|115390074|ref|XP_001212542.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114194938|gb|EAU36638.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1205

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 33/247 (13%)

Query: 599 LALCEPLDSVRLYLSRA--------TLIVVPSYLVDHWKTQIQQHVRPG--QLHLFVWTD 648
           + L + + ++ L +SR         TLI+ P  L+  WK +IQ+ +RPG  QL ++V   
Sbjct: 547 MGLGKTIQAIALMVSRPSQDPERKPTLIIAPVALMQQWKREIQRILRPGRCQLSIYVLHG 606

Query: 649 HKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHW------LRVMLDEGHTLGSS 702
            K+        +YDVV+TTF  LS+E  RR+ S      W       R+++DE   +  +
Sbjct: 607 DKRGVTFRDLKNYDVVLTTFGTLSSELKRRENSQKGFRAWGPAASGYRIIIDEAQCI-KN 665

Query: 703 LNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGI 762
            N  + L  A  L A+ RW ++GTP  N     +  L  +LKFL    Y  N + ++   
Sbjct: 666 RNTKSAL-AACRLNATYRWCMSGTPMMNN----VEELHSLLKFLRIRPYS-NLERFNKDF 719

Query: 763 LRPFEAEMEEGRSRL---LQLLHRCMISAR----KTDLQTI---PLCIKEVTFLNFTEEH 812
            RP ++   +   R    LQ+L + ++  R    K D + I   P  I E     F+E+ 
Sbjct: 720 TRPLKSASLQEHDRAMTQLQVLLKAVLLRRTKESKIDGRPILQLPRRISEKVHAAFSEDE 779

Query: 813 AGTYNEL 819
              Y  L
Sbjct: 780 MELYQAL 786



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K IIFSQF   + ++E  ++  G  +      M   ++  S+  F  D  C  +L+   
Sbjct: 1049 EKTIIFSQFTSLLDLLEVPISRRGWNYRRYDGSMKPQDRNASVLDFTDDPDCRIMLVSLK 1108

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + + GL+L   ++V + +P W+  +EEQ I RAHR+G  R + +  + +  TVE+++LE 
Sbjct: 1109 AGNSGLNLVAASQVIIFDPFWNPYIEEQAIDRAHRIGQMREVQIHRILVPNTVEDRILE- 1167

Query: 1111 LQDTDR 1116
            LQD  R
Sbjct: 1168 LQDKKR 1173


>gi|384253237|gb|EIE26712.1| hypothetical protein COCSUDRAFT_59229 [Coccomyxa subellipsoidea
           C-169]
          Length = 1216

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 32/192 (16%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW------TDHKKPSAHSLAWDY---DVVI 665
           ATLIV P+ ++  W+T+I +H  PG L + V+       +   PS    A D+   DVV+
Sbjct: 276 ATLIVSPASILKQWQTEITKHTHPGALKVLVYEHAGLDAERGAPSKGLSARDFAAADVVL 335

Query: 666 TTFNRLSAEWGRR-----------KK-----SPMMQVHWLRVMLDEGHTLGSSLNLTNKL 709
           TT+  L  +  R+           KK     +P+ ++ W RV LDE   + S+     KL
Sbjct: 336 TTYETLQKDVNRQGNVTTYALRQAKKYEVLPTPLTRLRWWRVCLDEAQLVESTTAKAAKL 395

Query: 710 QMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE 769
             A+++ A +RW +TGTP     +  L  L  +  FLH   Y  ++  W   + +P+ A 
Sbjct: 396 --AVNIQAQHRWCVTGTPL----SRGLEDLYGLFYFLHAHPYS-DRFWWHEVLQKPYVAG 448

Query: 770 MEEGRSRLLQLL 781
              GR RL+  L
Sbjct: 449 CPAGRKRLMAQL 460



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 15/132 (11%)

Query: 106 PDSSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPCMKL 165
           P S +    + +    + DIA+   + I T + P      + T R L     + +P +  
Sbjct: 87  PHSPKGGGSNQAFDEVVEDIAEADALEIYTAVKP------SGTERELE----ATLPQLTS 136

Query: 166 KLFPHQQAAVEWMLHREWNAEVLR-----HPLYIDLATEDGFYFYVNTVSGDIATGTAPT 220
            L  HQ+ A  WM+ RE  AE        HPL+ ++   DG  FYVN  +G +       
Sbjct: 137 TLHRHQRRAAAWMVDREIAAEAPSASDELHPLWREVTCLDGQRFYVNPYTGLLTRTRFSK 196

Query: 221 MRDFHGGMFCDE 232
                GG+  DE
Sbjct: 197 PNRVPGGILADE 208


>gi|442320889|ref|YP_007360910.1| SNF2/helicase domain-containing protein [Myxococcus stipitatus DSM
            14675]
 gi|441488531|gb|AGC45226.1| SNF2/helicase domain-containing protein [Myxococcus stipitatus DSM
            14675]
          Length = 1189

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 69/127 (54%)

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASC 1043
            +E  +A   + ++FSQF  H+ ++ + L   GI++  +        + +S+  F+   + 
Sbjct: 1016 VEELRAEGHRALVFSQFTSHLALVREVLDARGIRYEYLDGQSTPKAREQSVRAFQEGTAP 1075

Query: 1044 LALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTV 1103
            L L+   +   GL+L+    V  ++P W+ ++E+Q   RAHR+G  RP+ V  L  RGT+
Sbjct: 1076 LFLISLKAGGFGLNLTAANSVIHLDPWWNPAVEDQASDRAHRIGQDRPVTVYRLVARGTI 1135

Query: 1104 EEQMLEF 1110
            EEQML  
Sbjct: 1136 EEQMLSL 1142


>gi|405121846|gb|AFR96614.1| DNA supercoiling [Cryptococcus neoformans var. grubii H99]
          Length = 936

 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 9/123 (7%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF 668
           +LYL++ TL+VVP  LV  WK + ++H   G L L      + PS   L  DYD+++   
Sbjct: 182 KLYLAKGTLVVVPHILVAQWKLESEKHTEDGVLRLLEVGPDELPSVEKL-LDYDIILIDV 240

Query: 669 NRL-SAEWGRRKK-----SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
            R  S E   R+K     S ++Q  W R++LDEGH   S   ++N ++MA+ L+   RW+
Sbjct: 241 ARFASEETSFREKHNFAPSVLLQARWKRMILDEGHVAYS--KISNAMRMAMQLSVERRWI 298

Query: 723 LTG 725
           ++G
Sbjct: 299 VSG 301



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 1/116 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            DK +IF    E  H+ E  L +  I    +   +H  N+  +LD F      + L+    
Sbjct: 695  DKFVIFGNNYELGHLTEA-LDLLDIASTFVGHTLHVENRRLALDYFEMPGVRVCLMDLKL 753

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
            A+ GLDL    RV  + P+W   ++ Q I R HR+G TRP  V+ L   GT EE +
Sbjct: 754  AARGLDLVSANRVIFLGPVWSLDVQAQAIKRVHRIGQTRPTLVQILVTEGTFEEDI 809


>gi|408394075|gb|EKJ73324.1| hypothetical protein FPSE_06481 [Fusarium pseudograminearum CS3096]
          Length = 1154

 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +IE  LT A IKF  +   M    +   L+ F        LL+   A
Sbjct: 1004 KSVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNEFTEKKGFTILLLSLRA 1063

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RVF+M+P W  ++E Q I R HRMG    + V+   ++ +VEE+ML+
Sbjct: 1064 GGVGLNLTSAGRVFMMDPWWSFAVEAQAIDRVHRMGQEAEVQVKRFVVKESVEERMLK 1121



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS-------AHSLA-------WDY 661
           TL+V P  L+  W+++ ++  + G +   ++  ++K S       A + A         Y
Sbjct: 574 TLVVAPMSLLSQWQSEAEKASKDGTMKTELYYGNEKSSNLQALCCASNAANAPDLVITSY 633

Query: 662 DVVITTFNRLSAEWGRRK-KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            VV++ F+ L+A  G +   + +  + + R+++DE H + +  + T K    IS  A++R
Sbjct: 634 GVVLSEFSSLAARNGDKSFHNGLFSLRFFRIIIDEAHHIKNRSSKTAKACYEIS--ATHR 691

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE+        ++Q 
Sbjct: 692 WALTGTPIVN----KLEDLFSLVRFLGVEPWN-NFSFWRTFITVPFESGDFMRALDVVQT 746

Query: 781 LHRCMISARKTDLQTI---PLCI---KEVTFLN--FTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R   ++T    PL +   K++  +N   +E     YN +    +R       
Sbjct: 747 VLEPLVLRRTKGMKTPDGEPLVLLPPKQIEIVNVELSETERDVYNYIFNKAKRTF----- 801

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
               +VE+    K +      I  LR SCC
Sbjct: 802 --SQNVEAGTVMKAFTTIFAQILRLRQSCC 829



 Score = 45.8 bits (107), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 17/98 (17%)

Query: 165 LKLFPHQQAAVEWMLHREWNAEVLR----HPLYI------------DLATEDG-FYFYVN 207
           + L  +Q+ A+ WM+ +E + +  R    HPL+             DL   +G   FYVN
Sbjct: 436 MTLRKYQKQALHWMMAKEKDEKSHREPSMHPLWEQYEWPLKDVDENDLPQIEGQSKFYVN 495

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             SGD++       +   GG+  DE GLGKTI  LSL+
Sbjct: 496 PYSGDLSLDFPVQEQHCLGGILADEMGLGKTIQMLSLV 533


>gi|397627042|gb|EJK68326.1| hypothetical protein THAOC_10502 [Thalassiosira oceanica]
          Length = 1126

 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 111/266 (41%), Gaps = 80/266 (30%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAW--------------- 659
            T+I+VP  L++HW  Q++ H+    L++F  ++ ++ S   + +               
Sbjct: 315 TTVIIVPDALLEHWAQQVRSHL---NLNVFADSNEQRGSEFGVCYIDGVGDLSLARFPLN 371

Query: 660 --------------DYDVVITTFNRLSAEWGRRKK-------------------SPMMQV 686
                          Y +V+  F+R+  ++  ++K                   SP++Q+
Sbjct: 372 HKSTLDLPSIFDLIGYTIVVVPFSRIKQQFDNQRKRKKDESSLNLKSEVDYSSNSPLLQL 431

Query: 687 HWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP------NTPNSQLSHLQ 740
            W R+++DEGH LG +   ++       + +  RW+++GTPT       N  +  L  LQ
Sbjct: 432 RWFRIVVDEGHELGENPAGSDVTLFINEMASERRWVMSGTPTTGDEDDINYTSKGLDQLQ 491

Query: 741 PMLKFLHEEAY----------------------GQNQKAWDGGILRPFEAEMEEGRSRLL 778
            +L FL  E Y                       Q +  +   I +PF  + E GR  L 
Sbjct: 492 RLLMFLRHEQYGIIPAGGGGGGPPNDDRSSGKKAQAKTEFVKQIKKPFLRKEEIGRKELY 551

Query: 779 QLLHRCMISARKTDLQTIPLCIKEVT 804
           ++L + M+  +K+DL  +P  I +V+
Sbjct: 552 RVLDQVMVMHKKSDL-NLPKPIFKVS 576



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 41/52 (78%)

Query: 1046 LLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
            LL+D S + GLDLSFVT +FL+EPI D ++ EQV+SRAHR+G   P+ V+T+
Sbjct: 976  LLLDASLATGLDLSFVTHIFLLEPIDDAALLEQVVSRAHRLGCQGPVIVDTI 1027


>gi|448099366|ref|XP_004199131.1| Piso0_002540 [Millerozyma farinosa CBS 7064]
 gi|359380553|emb|CCE82794.1| Piso0_002540 [Millerozyma farinosa CBS 7064]
          Length = 767

 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 10/134 (7%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW 675
           TLIV P  L++ WK++I+   +   L  F +   +K + ++    YDVVI +++ L++E+
Sbjct: 267 TLIVCPVSLINQWKSEIETKAKG--LTAFAYNRKEKLNGYAALAKYDVVIISYSTLASEY 324

Query: 676 GRRKKSPMMQVH--WLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
            + + SP    +  W RV+LDE H + + L   NK   A+   A  RW LTGTP  N  N
Sbjct: 325 SKYESSPFFGSNSTWRRVVLDEAHQVKNILTKQNKAVCAVE--AKRRWCLTGTPIQNGFN 382

Query: 734 SQLSHLQPMLKFLH 747
                L+ + KFL 
Sbjct: 383 D----LRALFKFLR 392



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K IIFSQF     +++  L    I+       M  S +  +LD FR       LL     
Sbjct: 610  KTIIFSQFTSLFVILKDILKNEEIESLIFDGSMDISRRSITLDKFRSSKKHNVLLCSLKC 669

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S+GL+L+  +RV L +P W+  ++EQ I R +R+G    + +  L +RGTVEE++L  L
Sbjct: 670  GSVGLNLTCASRVILFDPWWNPQIQEQAIDRIYRIGQKSAVDIYELIIRGTVEEKIL-LL 728

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 729  QEKKR 733


>gi|307170865|gb|EFN62976.1| Transcription termination factor 2 [Camponotus floridanus]
          Length = 966

 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 21/226 (9%)

Query: 606 DSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVI 665
           D   LY    TL+V P+ L+  W  +++   + G L + ++   K+ S        D+VI
Sbjct: 439 DRKSLYHKGGTLVVCPASLLHQWDNEVRNRCKHGLLSVEIYHGSKRESIPKRLSKNDIVI 498

Query: 666 TTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLT 724
           TT+N LS E  R+ +S + ++HW RV+LDE H +    N  ++  +A+  L A+ RW LT
Sbjct: 499 TTYNILSRE--RKTQSTLYKIHWERVILDEAHIVR---NHKSQASLAVCELKANKRWALT 553

Query: 725 GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRC 784
           GTP  N    +   L  +LKFL+   +  + + W     R  + +   G  RL  ++   
Sbjct: 554 GTPIQN----KALDLYSILKFLNCSPFN-DLRVWK----RWVDNKNAAGYQRLAMVMKTL 604

Query: 785 MIS------ARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
           M+        +K D++ +P    E   +    +    Y ++++  R
Sbjct: 605 MLRRTKQELMKKGDVEDLPDKSIEEMMVKLDPQEQLVYEKILIYSR 650


>gi|320167261|gb|EFW44160.1| hypothetical protein CAOG_02185 [Capsaspora owczarzaki ATCC 30864]
          Length = 1223

 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 31/261 (11%)

Query: 588 DNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWT 647
           D++        LAL    D+ R   S  TLIV P  +V +W++QI +H  PG+L + ++ 
Sbjct: 517 DDMGLGKTVQSLALMLSDDAARPR-SSPTLIVCPLSVVGNWESQIAKHA-PGKLTVRIYH 574

Query: 648 DHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQ-----VHWLRVMLDEGHTLGSS 702
              +   H+   + DVV+TT+  +  EW    ++P  +     V W RV+LDE HT+   
Sbjct: 575 GPDRAKQHAAFRNADVVVTTYALVGNEWDLHIRNPSTESFLHTVQWWRVILDEAHTI--- 631

Query: 703 LNLTNKLQMAIS---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWD 759
              T K +MAI    L  + RW LTGTP  N+    L+ L  ++ F+    + Q+   W 
Sbjct: 632 --RTIKTKMAIGCCQLPGARRWCLTGTPIQNS----LNDLFALVHFMRIPHFSQSH-IWQ 684

Query: 760 GGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQT-----IPLCIKEV--TFLNFTEEH 812
               +   A   +     LQ L   +   R  DL+      I L  ++V    ++F+ E 
Sbjct: 685 SMFGK--RAPRSQSNQEALQGLISNICLRRTKDLKVNGKPIIELPDRKVFSDEVDFSPED 742

Query: 813 AGTYNELVVTVRRNI--LMAD 831
              Y EL     + +  LMAD
Sbjct: 743 RAKYRELSEQTFKELQRLMAD 763



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 5/146 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   + ++EQ L +   +F  +   M    + K+L  F  D +    L+    
Sbjct: 1052 KTVVFSQWTSMLDLLEQPLAINKFQFTRLDGRMGRRQREKALQAFDSDPAVTVFLISLKC 1111

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  ++V +++P W  S E+Q + R +R+G  RP+ V ++ +R TVEE +L+  
Sbjct: 1112 GSLGLNLTAGSQVVVLDPWWCPSAEDQAVDRVYRLGQMRPVVVRSIFVRDTVEESVLKLQ 1171

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHR 1137
            Q     +R L +     + E AR ++
Sbjct: 1172 Q----AKRDLMQSTFASKEEAARRNK 1193


>gi|307106103|gb|EFN54350.1| hypothetical protein CHLNCDRAFT_135608 [Chlorella variabilis]
          Length = 877

 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 12/183 (6%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           R TLIV P  ++ +W+ Q+++H + G+L + V+    +    +    YDVVITT+N L+ 
Sbjct: 336 RGTLIVCPLSVMSNWQMQLEEHTQ-GKLSVCVYHGPDRDRRVASLSSYDVVITTYNILAQ 394

Query: 674 EWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
           E     ++ + +V WLRV  DE HT+ ++   T   + A +L A  RW +TGTP  NT  
Sbjct: 395 ELS--LQNGVCKVDWLRVCADEAHTIKNTN--TQMARAAYALRAERRWAITGTPLQNT-- 448

Query: 734 SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDL 793
             L  L  + +FL  E    ++  +   + RP +A    G  RL  L+    I+ R+T  
Sbjct: 449 --LQDLHGITRFLRLEPL-DDRALFVRTLERPIKARDPLGLKRLQVLMG--TIALRRTKA 503

Query: 794 QTI 796
           Q +
Sbjct: 504 QQV 506



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 13/127 (10%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGI---KFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            K ++FSQF  ++ ++E  L   G    +  G  S       +++       +  + L+  
Sbjct: 732  KSVVFSQFTSYLDLVEAALAGEGFVTGRLDGKTSAKRRGEVLRAFQSSSASSPTVLLVSL 791

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+L+  +RV L++P W+ S+EEQ + R HR+G TR           ++EE+ML 
Sbjct: 792  KAGGVGLNLTAASRVHLLDPWWNPSVEEQAMDRVHRLGQTRA---------DSIEERMLA 842

Query: 1110 FLQDTDR 1116
             LQ+  R
Sbjct: 843  -LQEQKR 848



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 6/90 (6%)

Query: 155 LAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIA 214
           LAAS  P +   L+PHQQ A+ WM+ RE N+  L       +A   G   YV+ ++  I+
Sbjct: 151 LAAS--PEVVTALYPHQQEALAWMVRRE-NSNALPPFWGPRVADAGGRLTYVSQLTNFIS 207

Query: 215 TGTAPTMRDFHGGMFCDEPGLGKTITALSL 244
           T      R   GG+ CD+ GLGKT+  ++L
Sbjct: 208 TSRP---RALKGGILCDDMGLGKTLQVIAL 234


>gi|168705803|ref|ZP_02738080.1| swi/snf family helicase_2 [Gemmata obscuriglobus UQM 2246]
          Length = 183

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 18/145 (12%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKS------LDMFRHDASCLAL 1046
            K IIFSQ++E + V+ + L          Y P+    KI        LD F+ D S   L
Sbjct: 24   KAIIFSQWVEPLEVLAKALA--------KYGPLQYHGKIPQPQRTPILDRFKSDPSAHVL 75

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            LM  G+ S+GL+L F   VFL +  W+ ++E+Q I+RAHR+G   P+ V      GT+E 
Sbjct: 76   LMSYGTGSVGLNLQFTNYVFLFDRWWNPAIEDQAINRAHRLGQKHPVTVTRFLSGGTIEG 135

Query: 1106 QMLEFLQDTDRCRRLLKEELVKPER 1130
            ++ + L   D  R++  + + + ++
Sbjct: 136  RIADIL---DAKRKVFNDLIAQADK 157


>gi|403167397|ref|XP_003889875.1| adenosinetriphosphatase [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|375166993|gb|EHS63302.1| adenosinetriphosphatase [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 787

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 12/208 (5%)

Query: 910  RHILCLDCVAMDSEKCS-----LPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIE-LQP 963
            RHI C +C+    E  +      P C     +   +     EN   K    Q +++ L P
Sbjct: 552  RHIFCRECIRQYLETATEQEPECPVCHLPITIDLSQDALEDENMGSK--ARQGVLDRLDP 609

Query: 964  SYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYS 1023
               + S     L ++L + N +S+  +  K I+FSQF   + +IE++L +AG K A +  
Sbjct: 610  GKWRTSTKIEALVEELSKLN-QSDHTI--KSIVFSQFTVFLDLIERRLQLAGFKLARLQG 666

Query: 1024 PMHSSNKIKSLDMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISR 1082
             M    + +++  F ++      L+   A  + L+L+  +RVF+M+P W+ ++E Q + R
Sbjct: 667  NMTPEARNRTIQYFMNNNDVQVFLVSLKAGGVALNLTEASRVFIMDPWWNPAVELQAMDR 726

Query: 1083 AHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             HR+G  RP+ V  L +  ++E +++E 
Sbjct: 727  IHRLGQHRPVVVTRLIIENSIESRIVEL 754



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 85/175 (48%), Gaps = 27/175 (15%)

Query: 596 ALRLALCEPLDSVRLYLS-------RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD 648
           A  + + + + ++ L LS       + TL++ P+  +  W+ +I++  +   L + VW  
Sbjct: 188 ADEMGMGKTIQTIALILSDRVPGHRKQTLVIAPTVAIMQWRNEIEKFAKG--LTVNVWHG 245

Query: 649 HKKPSAHSLAWDYDVVITTFNRLSAEWGR------------RKKSPMMQVHWLRVMLDEG 696
             + +A     ++DVV+T+F  L + + R            ++ S + Q++W RV+LDE 
Sbjct: 246 GNRSNAQEEMENFDVVLTSFAVLESAFRRQNSGFRRKGQIIKESSLLHQINWHRVILDEA 305

Query: 697 HTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAY 751
           H +       N  + A  L A+ RW L+GTP  N    ++  L  +++FL  + +
Sbjct: 306 HNIKD--RSCNTAKGAFELKATYRWCLSGTPLQN----RVGELYSLIRFLGADPF 354


>gi|255946808|ref|XP_002564171.1| Pc22g01270 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591188|emb|CAP97415.1| Pc22g01270 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1198

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 35/243 (14%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
           R TLIV P  L+D W+ +IQ+HV+PG+  L V   H++         YDVVITTF  ++A
Sbjct: 535 RPTLIVAPKALMDQWRLEIQRHVKPGRHQLSVLIYHQRRRPWKELKKYDVVITTFGTITA 594

Query: 674 EW-----GRR-----KKSPMMQ------------VHWLRVMLDEGHTLGSSLNLTNKLQM 711
            +     G R     + + ++Q              W RV++DE   + +    ++  Q 
Sbjct: 595 HYKTLLEGERLAQEGRDASLIQDMKNMAGPLNPAAKWHRVIVDEAQNIKNPSAKSS--QA 652

Query: 712 AISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME 771
              L ++ RW LTGTP  N    +L   Q +L FL    Y    K     + R       
Sbjct: 653 CCRLNSTYRWCLTGTPMMN----RLEDFQSLLGFLRIRPYSNPAKFKADFVKRIKSGWGG 708

Query: 772 EGRSRLLQLLHRCMISAR----KTDLQTI---PLCIKEVTFLNFTEEHAGTYNELVVTVR 824
           E   + L++L + +   R    K D + I   P  + E   + F +  +  Y EL  + +
Sbjct: 709 EDVMKQLRVLVKSVCLRRTKTSKIDGEPILQLPPKVTEKVHVVFDQRESQVYEELNTSTQ 768

Query: 825 RNI 827
           R I
Sbjct: 769 RQI 771



 Score = 71.2 bits (173), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 2/131 (1%)

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
            ++ L +K IIFSQF   + ++E  L   G         M+   +  ++  F +D SC  +
Sbjct: 1016 DRGLEEKTIIFSQFTSLLDLLEVPLARRGWNHTRFDGSMNLKERNAAVTAFTNDPSCKIM 1075

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            L+   + + GL+L   + V + +P W+  +E+Q + RAHR+G  R + V  L +  TVE+
Sbjct: 1076 LVSLKAGNSGLNLVAASHVIMFDPFWNPYIEDQAVDRAHRIGQVRNVFVHRLLIENTVED 1135

Query: 1106 QMLEFLQDTDR 1116
            +++  LQD  R
Sbjct: 1136 RIVT-LQDQKR 1145


>gi|428165253|gb|EKX34252.1| hypothetical protein GUITHDRAFT_119546 [Guillardia theta CCMP2712]
          Length = 746

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 7/135 (5%)

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQLTVAGI---KFAGMYSPMHSSNKIKSLDMFRHD 1040
            L+++K +  K ++FS FL  +  IE  +  AGI   +  G  S +     I+  D +   
Sbjct: 587  LQADKTV--KSVVFSNFLSCLDEIESAMIAAGIPIFRIDGKTSILQRRRLIQDFDTYPQG 644

Query: 1041 ASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR 1100
            A  L LL      +GL L+  +R ++MEP W+ +++EQ + R HR+G TRP+ +     +
Sbjct: 645  A--LLLLSTKVGGVGLSLTMASRAYMMEPWWNAAVDEQAMHRLHRIGQTRPVTIIRYMCQ 702

Query: 1101 GTVEEQMLEFLQDTD 1115
            GT+E++++E  +  D
Sbjct: 703  GTIEQKIMEMQEKKD 717



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 36/163 (22%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQ-----LHLFVWTDHKKPSAHSLAWDYDVVIT---T 667
           TLIV P  ++  W +QI++H+  G+     LH      +   S+ SL+ DYDVV+T   T
Sbjct: 162 TLIVCPVSVLTSWDSQIERHIEDGKMTKMILHSKYLQRNCNVSSRSLS-DYDVVLTSYET 220

Query: 668 FNRLSAEW------------GRRKKSP---------MMQVHWLRVMLDEGHTLGSSLNLT 706
              L   W            GRR             +  + W RV+LDE H + +    T
Sbjct: 221 LRNLYQRWLFNRNATHAKKDGRRSSKQDIIGNQNIDIFDMRWWRVILDEAHWIKN--RKT 278

Query: 707 NKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEE 749
              +  + LTA NRW LT TP  N     +  +Q +L+FL  E
Sbjct: 279 RSHRACLQLTAINRWCLTATPLQN----DVDDIQSLLQFLRVE 317


>gi|46111685|ref|XP_382900.1| hypothetical protein FG02724.1 [Gibberella zeae PH-1]
 gi|85540718|sp|Q4IJ84.1|RAD5_GIBZE RecName: Full=DNA repair protein RAD5
          Length = 1154

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +IE  LT A IKF  +   M    +   L+ F        LL+   A
Sbjct: 1004 KSVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNEFTEKKGFTILLLSLRA 1063

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RVF+M+P W  ++E Q I R HRMG    + V+   ++ +VEE+ML+
Sbjct: 1064 GGVGLNLTSAGRVFMMDPWWSFAVEAQAIDRVHRMGQEAEVQVKRFVVKESVEERMLK 1121



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS-------AHSLA-------WDY 661
           TL+V P  L+  W+++ ++  + G +   ++  ++K S       A + A         Y
Sbjct: 574 TLVVAPMSLLSQWQSEAEKASKDGTMKTELYYGNEKSSNLQALCCASNAANAPDLVITSY 633

Query: 662 DVVITTFNRLSAEWGRRK-KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            VV++ F+ L+A  G +   + +  + + R+++DE H + +  + T+K    IS  A++R
Sbjct: 634 GVVLSEFSSLAARNGDKSFHNGLFSLRFFRIIIDEAHHIKNRSSKTSKACYEIS--ATHR 691

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE+        ++Q 
Sbjct: 692 WALTGTPIVN----KLEDLFSLVRFLGVEPWN-NFSFWRTFITVPFESGDFMRALDVVQT 746

Query: 781 LHRCMISARKTDLQTI---PLCI---KEVTFLN--FTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R  D++T    PL +   K++  +N   +E     YN +    +R       
Sbjct: 747 VLEPLVLRRTKDMKTPDGEPLVLLPPKQIEIVNVELSETERDVYNYIFNKAKRTF----- 801

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
               +VE+    K +      I  LR SCC
Sbjct: 802 --SQNVEAGTVMKAFTTIFAQILRLRQSCC 829



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 17/98 (17%)

Query: 165 LKLFPHQQAAVEWMLHREWNA----EVLRHPLYI------------DLATEDG-FYFYVN 207
           + L  +Q+ A+ WM+ +E +     E L HPL+             DL   +G   FYVN
Sbjct: 436 MTLRKYQKQALHWMMAKEKDEKSHREPLMHPLWEQYEWPLKDVDENDLPQIEGQSKFYVN 495

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             SGD++       +   GG+  DE GLGKTI  LSL+
Sbjct: 496 PYSGDLSLDFPVQEQHCLGGILADEMGLGKTIQMLSLV 533


>gi|322419843|ref|YP_004199066.1| SNF2-like protein [Geobacter sp. M18]
 gi|320126230|gb|ADW13790.1| SNF2-related protein [Geobacter sp. M18]
          Length = 1385

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 11/145 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF+ H+ +I + +  AGI +  +     +  + + +D F+     L L+   + 
Sbjct: 1234 KALVFSQFVGHLEIIREHVERAGIPYQYLDGSTPAVERKRRVDAFQSGEGDLFLISLKAG 1293

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML---- 1108
             +GL+L+    V  M+P W+ ++E+Q   RAHR+G  RP+ +  L  +GT+EE+++    
Sbjct: 1294 GVGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVTKGTIEEKIVGLHQ 1353

Query: 1109 -------EFLQDTDRCRRLLKEELV 1126
                     L+++D   ++  EEL+
Sbjct: 1354 QKRGLADSLLEESDLSGKVSAEELL 1378



 Score = 45.8 bits (107), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 142/348 (40%), Gaps = 43/348 (12%)

Query: 507  FISVLKEHYLLINSMTKKALTWLAKLSPDELSEMETTGLASPILGSYAA--GETQGFHKI 564
            F+ +    +L ++S  ++ L  LA  +           LAS +   +AA  GE QG H  
Sbjct: 843  FVQLEDGDFLALSSQLRRYLDDLATCADPHGKAFRFHPLASSVFEDFAAEAGEFQGDHYW 902

Query: 565  FQAFGLIRRVEKGITRWYYPKTLDN--LAFDLAAL----RLA-------------LCEPL 605
             Q    +R  E    R   P TL      + L       RLA             L + +
Sbjct: 903  HQQMQKLRAAEA--FRPVLPSTLQAELRGYQLEGFNWLNRLAHWGVGACLADDMGLGKTV 960

Query: 606  DSVRLYLSRA----TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDY 661
             ++   LS A    +L+V P+ +  +W+++  +      L+  V+   K+         +
Sbjct: 961  QALAQILSMAARGPSLVVAPTSVCLNWESEAAKFA--PTLNCIVYGGPKRAELLKDVKPF 1018

Query: 662  DVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRW 721
            D+VI ++  L     ++   P+  V W  ++LDE   + +    T + Q A+ L+   + 
Sbjct: 1019 DLVICSYGLL-----QQDDEPLAAVQWQTIVLDEAQAIKNM--ATKRSQAAMRLSGVFKM 1071

Query: 722  LLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFE-AEMEEGRSRLLQL 780
            + TGTP  N     L  L  + +F++    G + K ++     P E +E ++ R+RL +L
Sbjct: 1072 VATGTPIEN----HLGELWNVFRFINPGLLG-SLKQFNVRFASPIEKSEDKKARNRLKRL 1126

Query: 781  LHRCMISARKTD-LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI 827
            +   ++   K   L+ +P   +    +    E A  Y  +  +   N+
Sbjct: 1127 IQPFILRRTKNQVLEELPPRTEITISVEMGMEEASLYQAIRKSALDNL 1174


>gi|125775660|ref|XP_001359021.1| GA15429 [Drosophila pseudoobscura pseudoobscura]
 gi|54638762|gb|EAL28164.1| GA15429 [Drosophila pseudoobscura pseudoobscura]
          Length = 1058

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 121/551 (21%), Positives = 218/551 (39%), Gaps = 90/551 (16%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
             TL+V P+ L+  W+ +++  V   +L + V   + + +       YD+V+TT+N +  E
Sbjct: 515  GTLVVCPASLLRQWEAEVESKVNRHRLTVCVHHGNNRETKAKHLRTYDIVVTTYNIVGRE 574

Query: 675  WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS-LTASNRWLLTGTPTPNTPN 733
               ++ S +  V W R++LDE H + +   L +   +A+S L    RW LTGTP  N   
Sbjct: 575  --HKESSALFGVKWRRIILDEAHVVRNHKALAS---IAVSDLRGKFRWALTGTPIQN--- 626

Query: 734  SQLSHLQPMLKFLHEEAYG--QNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
             +   +  +LKFL    +      K W        + +   G++RL  L+   M+   K 
Sbjct: 627  -KELDIYALLKFLRCSPFDDLNTWKKW-------IDNKSAGGQNRLNLLMKSIMLRRTKA 678

Query: 792  DLQ------TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI----------------LM 829
             LQ      ++P     +  ++  ++    Y + V+T  R +                 +
Sbjct: 679  QLQQEGKLNSLPGKDLRMIEISLDKDEMNVY-QTVMTYSRTLFAQFLFQRAEKDSDSNFI 737

Query: 830  ADWNDPSH-----------------VESLLNPKQWKFRSTTIRNLRLS--CCVAGHIKVT 870
            +D N P++                  +   N K+ K     +  LRL   CC  G I   
Sbjct: 738  SDANKPTYNQIKDPNGAYYKLHEKFAKMAGNKKEVKSHEILVLLLRLRQICCHPGLIDSM 797

Query: 871  DAGEDIQETMDVLVENG----LDPLSQEYAF-IKYNLLNGGNCLRHILCLDCVAMDSEKC 925
              GE+ + +MD    +G    +D L+Q     I     +     R       V  D +  
Sbjct: 798  LEGEEAK-SMDADSSDGESPEIDLLAQLNKLAITDTSTSSRRSSRDNRSSRGVTEDDDGP 856

Query: 926  SLPGCGFLYEMQSPEILTRPENP--NPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPN 983
             L G        S  +L R  NP  N K P  + L  ++            LK  + + N
Sbjct: 857  PLHGDEARIAKASKNVLKRS-NPVFNMKRPSTKMLKVME-----------ILKSSILKDN 904

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF--RHDA 1041
                    DK II SQ+   + ++   L    +    +   +   N+ + ++ F  +H+ 
Sbjct: 905  -------NDKAIIVSQWTSVLEILRDHLENDKLSTLSLNGSIPVKNRQEIVNQFNDQHNQ 957

Query: 1042 SCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRG 1101
              + LL   +  +GL+L     + L++  W+  +E Q   R +R+G  + + +       
Sbjct: 958  KRILLLSLTAGGVGLNLVGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKDVMIYKFVCLD 1017

Query: 1102 TVEEQMLEFLQ 1112
            TVE+++L   Q
Sbjct: 1018 TVEQRILALQQ 1028


>gi|398411701|ref|XP_003857188.1| SNF2 family DNA-dependent ATPase domain-containing protein
           [Zymoseptoria tritici IPO323]
 gi|339477073|gb|EGP92164.1| SNF2 family DNA-dependent ATPase domain-containing protein
           [Zymoseptoria tritici IPO323]
          Length = 1187

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 42/157 (26%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--PSAHSLAWDYDVVITT 667
           + L+ ATLIVVP  L   W+++I +HV PG L++ V  D K+  PSA +L   YDV++ +
Sbjct: 346 MLLTSATLIVVPRNLCSQWQSEILKHVEPGALNVLVMDDLKRALPSAKALC-SYDVILFS 404

Query: 668 FNRLSAE-------WGRR-----------------------------KKSPMMQVHWLRV 691
            NR   E        GRR                              +SP+  +H+ R+
Sbjct: 405 RNRFDLESKHGTDGHGRRIARTPLVCTCPYIGASRTRDCHCLREDMLYQSPLKNLHFKRL 464

Query: 692 MLDEGHTLGSSLNLTNKLQMAISL-TASNRWLLTGTP 727
           ++DEGH+  S +N TN + +A  L TA NRWL++GTP
Sbjct: 465 IVDEGHSF-SQIN-TNAVVVATQLVTAENRWLVSGTP 499



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 1/122 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+++F +       I Q L +  IK       + S  + + +  F        LLMD  
Sbjct: 902  EKILVFYEGDSLAFFIAQMLELLNIKHDIYARSLRSDLQSEYVVRFNETPDVRVLLMDVK 961

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              + GL+L   +RV  + P+   S+E Q I RAHR+G TR +HVETL + GT+EE MLE 
Sbjct: 962  CGAHGLNLCSASRVIFVNPVCRPSVEAQAIKRAHRIGQTRAVHVETLVLAGTIEEGMLER 1021

Query: 1111 LQ 1112
             Q
Sbjct: 1022 AQ 1023


>gi|306818666|ref|ZP_07452388.1| SNF2 family protein [Mobiluncus mulieris ATCC 35239]
 gi|304648352|gb|EFM45655.1| SNF2 family protein [Mobiluncus mulieris ATCC 35239]
          Length = 970

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 8/126 (6%)

Query: 989  ALPD------KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS 1042
            ALPD       +++FSQF   + ++  +L   GI +A  Y    + N+   +D F+  ++
Sbjct: 811  ALPDLAAQDHNILVFSQFTSFLALLRARLEDQGITYA--YLDGSTRNRRDQVDCFQRGSA 868

Query: 1043 CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGT 1102
             + L+   S   GL+L+    VFL +P W+  +E Q I RAHR+G TRP++V  L  + T
Sbjct: 869  RVFLISLKSGGFGLNLTAADYVFLCDPWWNPQVESQAIDRAHRIGQTRPVNVYRLVAKNT 928

Query: 1103 VEEQML 1108
            +E+++L
Sbjct: 929  IEQRVL 934


>gi|443326475|ref|ZP_21055128.1| DNA/RNA helicase, superfamily II, SNF2 family [Xenococcus sp. PCC
            7305]
 gi|442793929|gb|ELS03363.1| DNA/RNA helicase, superfamily II, SNF2 family [Xenococcus sp. PCC
            7305]
          Length = 1398

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 66/120 (55%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++H+H+I   L    I +  +     +  +   +D F+     + L+   + 
Sbjct: 1249 KALVFSQFVDHLHIIRDYLDEKNISYQYLDGSTPAKKRKIGVDKFQGGEGDVFLISLKAG 1308

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
              GL+L+    V  M+P W+ ++E+Q   RAHR+G  RP+ +  L  RGT+EE+++E  Q
Sbjct: 1309 GTGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQKRPVTIYRLVTRGTIEEKIVELHQ 1368


>gi|50311677|ref|XP_455865.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|74689997|sp|Q6CJM4.1|RAD5_KLULA RecName: Full=DNA repair protein RAD5
 gi|49645001|emb|CAG98573.1| KLLA0F17479p [Kluyveromyces lactis]
          Length = 1114

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 88/160 (55%), Gaps = 10/160 (6%)

Query: 611 YLSRATLIVVPSYLVDHWKTQIQQHVR--PGQLHLFVWTDHKKPSAHSLAWDY-DVVITT 667
           Y  R TLIVVP  L++ W+++ ++  +    +  ++   + K   A+ L  +   V+ITT
Sbjct: 541 YAYRTTLIVVPMSLLNQWQSEFEKANKDLKKRCEIYYGNNIKDLRAYVLGPNAPSVIITT 600

Query: 668 FNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
           +  + +E+GR   S +  V + R++LDEGHT+ +    T+K    I+L +S +W+LTGTP
Sbjct: 601 YGIIQSEYGRTSTSGLFNVVFFRIILDEGHTIRNRSTRTSK--AVIALRSSRKWILTGTP 658

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFE 767
             N    +L  L  +++FL+ E +  +   W   +  PFE
Sbjct: 659 IIN----RLDDLFSLVQFLNLEPWS-HINYWKRYVSVPFE 693



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 13/127 (10%)

Query: 992  DKVIIFSQFLEHIHVIEQQL-------TVAGIKFAGMYSPMHSSNKIKSLDMFR-HDASC 1043
            +++I+FSQF   + ++E +L        V   KF G    +    + + L+ F   D SC
Sbjct: 958  EQIIVFSQFSSFLDILEIELRSHLPRDQVIIYKFDGR---LDMKERTRILEQFHDKDLSC 1014

Query: 1044 LALLMDG--SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRG 1101
            + LL+    +  +GL+L+  +R F+M+P W   ME+Q I R HR+G  + + V    +  
Sbjct: 1015 IKLLLLSLKTGGVGLNLTCASRAFMMDPWWSPGMEDQAIDRIHRIGQQQTVKVVRFIIDN 1074

Query: 1102 TVEEQML 1108
            +VEE+ML
Sbjct: 1075 SVEEKML 1081



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 24/107 (22%)

Query: 163 MKLKLFPHQQAAVEWMLHREWN--------AEV-------------LRHPLYIDLAT--- 198
            KL+L  +Q+ ++ WML RE+         AEV              R P      T   
Sbjct: 392 FKLQLRRYQKQSLSWMLKREYEYSHLSEKAAEVSIDGNSMNPLWKKFRWPSNSKQGTPNH 451

Query: 199 EDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           ED  +FY N  +G+ +          +GG+  DE GLGKTI+AL+LI
Sbjct: 452 EDDCFFYANLYTGEFSIEKPVIKTIINGGILADEMGLGKTISALALI 498


>gi|307700797|ref|ZP_07637822.1| SNF2 family N-terminal domain protein [Mobiluncus mulieris FB024-16]
 gi|307613792|gb|EFN93036.1| SNF2 family N-terminal domain protein [Mobiluncus mulieris FB024-16]
          Length = 970

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 8/126 (6%)

Query: 989  ALPD------KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS 1042
            ALPD       +++FSQF   + ++  +L   GI +A  Y    + N+   +D F+  ++
Sbjct: 811  ALPDLAAQDHNILVFSQFTSFLALLRARLEDQGITYA--YLDGSTRNRRDQVDCFQRGSA 868

Query: 1043 CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGT 1102
             + L+   S   GL+L+    VFL +P W+  +E Q I RAHR+G TRP++V  L  + T
Sbjct: 869  RVFLISLKSGGFGLNLTAADYVFLCDPWWNPQVESQAIDRAHRIGQTRPVNVYRLVAKNT 928

Query: 1103 VEEQML 1108
            +E+++L
Sbjct: 929  IEQRVL 934


>gi|255590174|ref|XP_002535194.1| helicase, putative [Ricinus communis]
 gi|223523786|gb|EEF27189.1| helicase, putative [Ricinus communis]
          Length = 518

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)

Query: 573 RVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQI 632
           RV K +T     + +D       A   A+     S  +  ++ TLIV P  +   W TQ+
Sbjct: 310 RVSKKVTAGRKRRKIDGTLLGSNAKGKAVSIIDKSSSVSGAKPTLIVCPPVVFSTWITQL 369

Query: 633 QQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE--WGRRKKSPMMQVHWLR 690
           + H   G L ++++   +   A  L    D+V+TT++ L++E  W   + SP+  V W R
Sbjct: 370 EDHTVGGSLKVYIYHGERTKEAEELK-RQDIVLTTYSTLASEDSW---EDSPVKMVEWWR 425

Query: 691 VMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEA 750
           V+LDE H + ++     + +   +L A  RW++TGTP  N      S    ++ FL  E 
Sbjct: 426 VILDEAHVIKNA--NAQQSRAVTNLNAKRRWVVTGTPIQNGSFDLFS----LMAFLRFEP 479

Query: 751 YGQNQKAWDGGILRPFEAEMEEGRSRL 777
           +   +  W   + RP     ++G SRL
Sbjct: 480 FSI-KNYWQSLVQRPLAQGDKKGLSRL 505



 Score = 42.7 bits (99), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 33/176 (18%)

Query: 70  DWEKRKSVLLDGGECFKDGCDSSIWNISDCHVLDWKPDSSRVKPEDNSCSTGISDIADDI 129
           D+E+ KS +  GG       D+S + +S+  V+  K   S  K  D      I  + DD 
Sbjct: 132 DFERVKSEITRGGLVLITEIDAS-FGLSEAMVVKEKNKKSGFKSVDE-----IFKLVDDN 185

Query: 130 VISILTRLGPIDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLR 189
           V +   +LG ++  +                  +K +LF HQ+  + W+++RE + E+  
Sbjct: 186 V-NKKGKLGTLEPPK----------------EVIKSELFLHQKEGLWWLMNRENSNEL-- 226

Query: 190 HPLYIDLATEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
            P +     +DG Y  V T   +  T   P      GG+  D+ GLGKT+T LSLI
Sbjct: 227 PPFW---EEKDGKYGNVLT---NYHTDNRP--EPLRGGILADDMGLGKTLTLLSLI 274


>gi|312130874|ref|YP_003998214.1| snf2-related protein [Leadbetterella byssophila DSM 17132]
 gi|311907420|gb|ADQ17861.1| SNF2-related protein [Leadbetterella byssophila DSM 17132]
          Length = 962

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 85/147 (57%), Gaps = 7/147 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K +IFSQF++H+  + + L    I +  +Y    + N+++ ++ F++ A  L  L+   A
Sbjct: 814  KTLIFSQFVKHLKFVAEGLRAEKIPY--LYLDGSTKNRMELVNRFQNSAEELIFLISLKA 871

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              +GL+L+    VFL++P W+ ++E Q + RAHR+G T+ +       + T+EE+++E L
Sbjct: 872  GGVGLNLTAAENVFLLDPWWNPAIEAQAVDRAHRIGQTKTVFSYKFITQNTIEEKIVE-L 930

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHRT 1138
            Q+T   +R L +EL+  E    +S  T
Sbjct: 931  QNT---KRQLFDELILEEESFFKSLST 954



 Score = 40.4 bits (93), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 36/225 (16%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW 675
           +L+V+P+ L+ +W+ +  +     +L + V    ++    +    YD+VI ++  L ++ 
Sbjct: 560 SLLVLPTSLIYNWQKEASRFT--PELRVMVHYGTQRSKDSNAFQFYDLVICSYGILRSDI 617

Query: 676 GRRKKSPMMQVHWLRVMLDEGHTL--GSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPN 733
              K        +   +LDE  ++   SS N     +  + L   NR +LTGTP  N+  
Sbjct: 618 DFIK-----HFRFNYAILDESQSIKNASSANF----KAVMELNTKNRLILTGTPLENSTL 668

Query: 734 ---SQLSHLQP-MLKFLH--EEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRC--- 784
              SQ+S + P +L  L+  +  Y QNQ             E E+  S L QL  +    
Sbjct: 669 DLWSQMSFVNPGLLGSLNSFKRKY-QNQ------------IEKEKDESSLAQLSSKIKPF 715

Query: 785 MISARKTDL-QTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL 828
           M+   K  + + +P  I+ + +   TEE    Y+E    +R  I+
Sbjct: 716 MLRRNKRQVAKDLPEKIESIVYSQMTEEQEKLYDETKSYLRNQIM 760


>gi|408400067|gb|EKJ79155.1| hypothetical protein FPSE_00756 [Fusarium pseudograminearum CS3096]
          Length = 611

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 15/249 (6%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           + ATL+VV S L    +T   +H + G L +  +    + +  +   ++D+V+TTF  L 
Sbjct: 345 TSATLVVVTSTLSGTNRTG-DRHFKDGSLRVHTFHGDSRSTESTSLMNHDIVLTTFATLV 403

Query: 673 AEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTP 732
           +++ RRK   +  V W RV+LDE H + +    + + +   SL    RW L+GTP  N  
Sbjct: 404 SDFKRRK--VLQSVEWFRVVLDEAHWIRN--QSSKQFKAVDSLVTERRWCLSGTPIQNCI 459

Query: 733 NSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
           N  +S    +L+FL  E +  N   +   IL P   E     +  LQ+L + +   R   
Sbjct: 460 NDLVS----LLRFLKFEPFS-NMDVFRQYILDPLRTEKLLDSTNPLQMLLQSVCLRRTEK 514

Query: 793 LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRST 852
              +P    E+  L+   +    Y+++    R     A+ +D     + ++ K+   R +
Sbjct: 515 YLNLPAAHYELVTLSLHHDEQKLYSDVFRKYR-----AELDDLVSSLTKMDKKKATLRFS 569

Query: 853 TIRNLRLSC 861
            I  LR  C
Sbjct: 570 MISELRRLC 578


>gi|170109825|ref|XP_001886119.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164639049|gb|EDR03323.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1192

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 37/153 (24%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           +YL+ ATLIVVP  L+  W  +I +H       L + +    P+  SLA DYD+++ T+N
Sbjct: 361 MYLTSATLIVVPPNLLGQWDREITKHAEYPVRVLILRSKSPLPALKSLASDYDIILMTYN 420

Query: 670 RLSAEWGRRKKS-----------------------------PMMQVHWLRVMLDEGHT-- 698
           R +AE  ++  S                             P +Q+ W R+++DEGH   
Sbjct: 421 RFTAEASKKDISKLHSSDPCTCPEFPGSRVPNCTCQVVGVTPFLQIRWKRLVIDEGHVSA 480

Query: 699 -LGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
            L + L    KL     L+   RW++TGTPT N
Sbjct: 481 FLSTILTPFTKL-----LSVERRWIVTGTPTTN 508



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 1/118 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            DK +IFS     +  I + L +  +KF    + + +  + + +  F    +    LM+  
Sbjct: 963  DKFLIFSDSELSLAHISEALQLVQVKFLRFTTQIPAQFREQLVLTFETSPTYRVFLMELK 1022

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              + GL+L   +RV   EP+W   +E Q I RAHR+G TRPI V+TLA+RGT EE M+
Sbjct: 1023 HGARGLNLISASRVIFCEPVWQADVESQAIKRAHRIGQTRPITVKTLAIRGTAEENMV 1080



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTMR 222
           M+  L+ +Q+ ++  M+ +E +   +  PL+I L T D   F+V   +  +     P + 
Sbjct: 144 MRSTLYKYQRRSIAAMMQKELDFRDVPDPLFIPLKTMDMRQFHVQPGTMTVLQ-ECPMVA 202

Query: 223 DFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGV 259
              GG+ C+E G GKT+  + LIL T   ++ P + +
Sbjct: 203 PCRGGILCEELGTGKTVMIIGLILATLRQISAPEESI 239


>gi|395220658|ref|ZP_10402745.1| Non-specific serine/threonine protein kinase, partial [Pontibacter
            sp. BAB1700]
 gi|394453553|gb|EJF08436.1| Non-specific serine/threonine protein kinase, partial [Pontibacter
            sp. BAB1700]
          Length = 214

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/117 (33%), Positives = 70/117 (59%), Gaps = 3/117 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            KV+IFSQF++H+ +I Q L    I +A  Y   ++ N+ + +++F++D S    L+   A
Sbjct: 66   KVLIFSQFVKHLEIIRQVLNEKEITYA--YLDGNTKNRQQQVELFQNDPSIQVFLISLKA 123

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +GL+L+    VF+++P W+ ++E Q + RAHR+G    +       + TVEE++L
Sbjct: 124  GGVGLNLTAADYVFILDPWWNPAVEAQAVDRAHRIGQQNKVFTYKFITKDTVEEKIL 180


>gi|358397322|gb|EHK46697.1| hypothetical protein TRIATDRAFT_195457 [Trichoderma atroviride IMI
            206040]
          Length = 1141

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K IIFSQF   + +IE  L  A IKF  +   M    +   L  F      + +LM   A
Sbjct: 991  KSIIFSQFTSFLSLIEAALNRANIKFLRLDGSMTQKARAAVLQEFSDSKGFVVMLMSLRA 1050

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+   RVF+M+P W  ++E Q I R HR+G    + V+   ++G+VEE+ML+ 
Sbjct: 1051 GGVGLNLTSAGRVFMMDPWWSYAVELQAIDRVHRLGQQDEVVVKRFIVKGSVEERMLKI 1109



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 93/192 (48%), Gaps = 19/192 (9%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP----SAHSLAWDYDVVITTFNRL 671
           TL+V P  L+  W ++ ++  + G + + ++   +K     S  S +   D+VIT++  +
Sbjct: 566 TLVVAPMSLLSQWHSEAEKASKAGTMKVQLYYGTEKALNLQSLCSGSNAPDLVITSYGVV 625

Query: 672 SAEWG--------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLL 723
            +E+G        R   + +  + + RV+LDE H + +  + T +    I+  A +RW L
Sbjct: 626 LSEFGSVVPKNGERAFHTGIFSLKFFRVILDEAHYIKNRASKTARACYEIA--ADHRWAL 683

Query: 724 TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
           TGTP  N    +L  L  +++FL  E +  N   W   I  PFE+        ++Q +  
Sbjct: 684 TGTPIVN----RLEDLFSLVRFLGVEPWN-NFSFWKTFITVPFESGDFVRALDVVQTVLE 738

Query: 784 CMISARKTDLQT 795
            +++ R  D++T
Sbjct: 739 PLVTRRTKDMKT 750



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 17/98 (17%)

Query: 165 LKLFPHQQAAVEWMLHREWNAEVLR----HPLY------------IDLATEDG-FYFYVN 207
           + L P+Q+ ++ WML +E +    R    HPL+             DL T +G   FYVN
Sbjct: 430 MSLRPYQKQSLHWMLAKEKDERSHREPSMHPLWEEYLWPIKDVDDKDLPTVEGQSKFYVN 489

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             SG++        +   GG+  DE GLGKTI  LSLI
Sbjct: 490 PYSGELTLDFPVQEQHCLGGILADEMGLGKTIQMLSLI 527


>gi|269976365|ref|ZP_06183357.1| helicase/SNF2 family domain-containing protein [Mobiluncus mulieris
            28-1]
 gi|269935436|gb|EEZ91978.1| helicase/SNF2 family domain-containing protein [Mobiluncus mulieris
            28-1]
          Length = 970

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 8/126 (6%)

Query: 989  ALPD------KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS 1042
            ALPD       +++FSQF   + ++  +L   GI +A  Y    + N+   +D F+  ++
Sbjct: 811  ALPDLAAQDHNILVFSQFTSFLALLRARLEDQGITYA--YLDGSTRNRRDQVDCFQRGSA 868

Query: 1043 CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGT 1102
             + L+   S   GL+L+    VFL +P W+  +E Q I RAHR+G TRP++V  L  + T
Sbjct: 869  RVFLISLKSGGFGLNLTAADYVFLCDPWWNPQVESQAIDRAHRIGQTRPVNVYRLVAKNT 928

Query: 1103 VEEQML 1108
            +E+++L
Sbjct: 929  IEQRVL 934


>gi|227875351|ref|ZP_03993493.1| SNF2 family superfamily II DNA/RNA helicase [Mobiluncus mulieris ATCC
            35243]
 gi|227844256|gb|EEJ54423.1| SNF2 family superfamily II DNA/RNA helicase [Mobiluncus mulieris ATCC
            35243]
          Length = 966

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 8/126 (6%)

Query: 989  ALPD------KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS 1042
            ALPD       +++FSQF   + ++  +L   GI +A  Y    + N+   +D F+  ++
Sbjct: 807  ALPDLAAQDHNILVFSQFTSFLALLRARLEDQGITYA--YLDGSTRNRRDQVDCFQRGSA 864

Query: 1043 CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGT 1102
             + L+   S   GL+L+    VFL +P W+  +E Q I RAHR+G TRP++V  L  + T
Sbjct: 865  RVFLISLKSGGFGLNLTAADYVFLCDPWWNPQVESQAIDRAHRIGQTRPVNVYRLVAKNT 924

Query: 1103 VEEQML 1108
            +E+++L
Sbjct: 925  IEQRVL 930


>gi|452847872|gb|EME49804.1| hypothetical protein DOTSEDRAFT_68558 [Dothistroma septosporum NZE10]
          Length = 1204

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 7/136 (5%)

Query: 990  LPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            + +K+++F Q     + I Q L +  IK       + S  K + +  F        LLMD
Sbjct: 968  IDEKILVFYQGDNIAYYIAQALDLLHIKHEIYAKSLQSRLKAEYIVKFDQGEETRVLLMD 1027

Query: 1050 -GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             G A+ GL+LS  +R++ + P+   ++E Q I R+HR+G  R + VETL ++G++EEQ L
Sbjct: 1028 VGQAAFGLNLSSASRIYFVNPVCRPNVEAQAIKRSHRIGQMRSVVVETLVLKGSLEEQFL 1087

Query: 1109 EFLQDTDRCRRLLKEE 1124
            E      R RR+  +E
Sbjct: 1088 E------RSRRMTADE 1097



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 71/160 (44%), Gaps = 41/160 (25%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--PSAHSLAWDYDVVIT 666
           R+ L+  TLIVVP  L   W+T+I +HV  G L + V  D KK  P A  L   YDVV+ 
Sbjct: 392 RMILAATTLIVVPQNLCKQWQTEIAKHVEDGYLRVLVMDDRKKALPVAKELR-RYDVVLF 450

Query: 667 TFNRLSAEW-------GRR----------------------------KKSPMMQVHWLRV 691
           T  R   E        GRR                             +SP+  +H  R+
Sbjct: 451 TRGRFDMENKDGEDPDGRRVVGTMTCRCPYAGATRTRDCTCVREDAVYESPLKHLHLKRL 510

Query: 692 MLDEGHTLGSSLNLTNKLQMAISL-TASNRWLLTGTPTPN 730
           ++DEGH   S    TN   +A  L TA +RW ++GTP  +
Sbjct: 511 IVDEGHFFSS--KSTNTAIVANRLVTADHRWSVSGTPAKD 548


>gi|452980677|gb|EME80438.1| hypothetical protein MYCFIDRAFT_198667 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 1417

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 118/282 (41%), Gaps = 51/282 (18%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLF----VWTDHKKPSAHS-------LAWDY 661
           S+ATLIV PS L   WK+++++H     L++F    + T H K    S       L  +Y
Sbjct: 290 SKATLIVTPSSLTQQWKSELERHA--PDLNIFHYEGISTGHGKKKDRSDATVIRELCEEY 347

Query: 662 DVVITTFNRLSAEW----------------GRRKKSPMMQVHWLRVMLDEGHTLGSSLNL 705
           DVVITT+  L  E                   RK+SP++Q+ W RV+LDE   + S   +
Sbjct: 348 DVVITTYQVLGREIHFAEDPPDRAMRHARKHERKRSPLVQIEWWRVVLDEAQMVES--GV 405

Query: 706 TNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGI--- 762
           T   ++A  L   + W ++GTP        +  L  +L FL  E +  N K W   I   
Sbjct: 406 TAAARVACRLPRVHSWAVSGTPL----RKDVQDLLGLLIFLRYEPFANNGKLWSHLITNH 461

Query: 763 ---LRPFEAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
               R    E+   R    Q+     +  +K  + T+P  +  +   N+TE       E+
Sbjct: 462 RHHFRKIFGEIAL-RHTKAQIRDELQLPPQKRVVVTVPFSV--IEHQNYTELFDQMCEEI 518

Query: 820 VVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSC 861
            +      +  DW DPS   +    + W  R      LR +C
Sbjct: 519 GLNKSGEPIRGDW-DPSDPRTTEAMRSWLVR------LRQTC 553



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 12/129 (9%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K IIFSQ+ E + V+   L    I FA +        +  +++ FR+DAS   LL+D   
Sbjct: 1177 KSIIFSQYREFLDVLGGALRDFKIGFARL-------GRSGAVEKFRNDASIDCLLLDAKT 1229

Query: 1053 -SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S GL L   T VF+ EP+   ++E Q I+R HR+G TRP  V    +  TVEE + E  
Sbjct: 1230 DSSGLTLVNATHVFVCEPLIQTAVELQAIARVHRIGQTRPTTVWMYLINDTVEEAIYE-- 1287

Query: 1112 QDTDRCRRL 1120
              T   RRL
Sbjct: 1288 --TSVARRL 1294


>gi|400599571|gb|EJP67268.1| SNF2 superfamily RAD5 protein [Beauveria bassiana ARSEF 2860]
          Length = 1118

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +IE  LT A IKF  +   M    +   L+ F      + LL+   A
Sbjct: 968  KSVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNQFTDKPGFMVLLISLRA 1027

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+   RVF+M+P W  ++E Q I R HR+G    + V+   ++ +VEE+ML+ 
Sbjct: 1028 GGVGLNLTSAGRVFMMDPWWSFAVEAQAIDRVHRLGQEDEVQVKRFIVKESVEERMLKI 1086



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 125/270 (46%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP---------SAHSLAWD-----Y 661
           TL+V P  L+  W+++ ++  + G + + ++  ++K          S  S+A D     Y
Sbjct: 539 TLVVAPMSLLSQWQSEAEKASKEGTMKIELYYGNEKTNNLQALCSGSNASMAPDVVITSY 598

Query: 662 DVVITTFNRLSAEWGRRK-KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            V+++ F+ ++A+ G +   + +  +++ R++LDE H + +  + T +    IS  A++R
Sbjct: 599 GVILSEFSAITAKNGDKSFHNGIFSLNFFRIILDEAHHIKNRSSKTARACYEIS--ATHR 656

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W+LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE+        ++Q 
Sbjct: 657 WVLTGTPIVN----KLEDLFSLVRFLGVEPWN-NFSFWKTFITVPFESGDFVRALNVVQT 711

Query: 781 LHRCMISARKTDLQT------IPLCIKEVTF--LNFTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R  D++T      +PL  K+V    +  ++     Y+ +    +R       
Sbjct: 712 VLEPLVMRRTKDMKTPDGQPLVPLPPKQVDLVEVELSKTERDVYDYIYNRAKRTF----- 766

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
               +VE+    K +      I  LR SCC
Sbjct: 767 --NQNVEAGTVMKAFTTIFAQILRLRQSCC 794



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 17/98 (17%)

Query: 165 LKLFPHQQAAVEWMLHREWNAEVLR----HPLYIDLA-------------TEDGFYFYVN 207
           + L P+Q+ ++ WM+ +E +A   R    HPL+ +                 D   FYVN
Sbjct: 401 MTLRPYQKQSLHWMIAKEKDARSNREPSMHPLWEEYVWPVKDHDDKALPVVSDVTRFYVN 460

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             SGD++       +   GG+  DE GLGKTI  LSL+
Sbjct: 461 PYSGDLSLEFPVQEQHCLGGILADEMGLGKTIQMLSLV 498


>gi|430762091|ref|YP_007217948.1| SNF2-related protein [Thioalkalivibrio nitratireducens DSM 14787]
 gi|430011715|gb|AGA34467.1| SNF2-related protein [Thioalkalivibrio nitratireducens DSM 14787]
          Length = 1370

 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 11/150 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            + ++FSQF++H++++   L   GI +  +     +S + + +  F+  A  L L+   + 
Sbjct: 1218 RALVFSQFVDHLNLVRAALDQRGIPYQYLDGSTPASARAERVAAFQGGAGDLFLISLKAG 1277

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE--- 1109
              GL+L+    V  ++P W+ ++E+Q   RAHR+G  RP+ V  L MRG++EE++++   
Sbjct: 1278 GTGLNLTAADYVIHLDPWWNPAVEDQASDRAHRIGQQRPVTVYRLVMRGSIEERIIDLHA 1337

Query: 1110 --------FLQDTDRCRRLLKEELVKPERE 1131
                     L+  D   RL  E L+   RE
Sbjct: 1338 RKRDLADTLLEGGDASARLDTEALLALLRE 1367


>gi|358370172|dbj|GAA86784.1| hypothetical protein AKAW_04898 [Aspergillus kawachii IFO 4308]
          Length = 1165

 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 141/302 (46%), Gaps = 43/302 (14%)

Query: 594  LAALRLALCEPLDSVRLYLSRATLIVVPSYLV-DHWKTQIQQHVRPGQLHLFVWTDHKKP 652
            L+ +   L  P D++ + + ++TL+VVP+ L+   W  ++++HV PG L  + +  H   
Sbjct: 759  LSCVEATLETPADTIPVPV-KSTLVVVPTELILQGWIEEVEKHVTPGTLQCYKY--HGSK 815

Query: 653  SAHSLAWDYDVVITTFNRLSAEWGRRKKSPMM-QVHWLRVMLDEGHTLGSSLNLTNKLQM 711
               SLA    +V+ T++ ++AE+ + +   ++ QVHW R++LDE H + +   L    Q 
Sbjct: 816  RQFSLASPPLIVLATYDTVAAEFSKSEGGGVLKQVHWHRLILDEAHYIRNEDTLA--FQA 873

Query: 712  AISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME 771
              SL+AS RW  TGTP  N+    L  L  +++FL    Y  +  A+   I +   +   
Sbjct: 874  VNSLSASIRWCTTGTPIQNS----LHDLASLVRFL-RVPYLDSHAAFHEHIAKLSSSASA 928

Query: 772  EG----RSRLLQLLHRCMISARK-----TDLQTIPLCIKEVTFLNFTEEHAGTYNELVVT 822
            +       R L+LL   +   R+      DLQ+  +  +    L+F+E     YNEL   
Sbjct: 929  DDICHRPHRNLELLLAVICLRRRFSTLFPDLQSTAITYR----LSFSEVERRAYNELTRG 984

Query: 823  VRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTDAGEDIQETMDV 882
                ++ A                  F +T +     S C+ G +K  D G+D + ++D 
Sbjct: 985  CNGQLMAA-------------VSMRMFCNTGMS----SICLGGEVKDYD-GDDQRSSLDT 1026

Query: 883  LV 884
            +V
Sbjct: 1027 VV 1028


>gi|19113394|ref|NP_596602.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe
            972h-]
 gi|74676047|sp|O60177.1|YG42_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C23E6.02
 gi|3116120|emb|CAA18870.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe]
          Length = 1040

 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 4/135 (2%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            DK++IFSQF+  + +        GIK+      + ++ + ++L  F  D +   LL+   
Sbjct: 884  DKILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEVDPNVRVLLISLK 943

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A ++GL+L+    V +++P W+  +EEQ + RAHR+G  +P+++  +    T+EE++L  
Sbjct: 944  AGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPVNILRIVTNNTIEERVLAL 1003

Query: 1111 LQDTDRCRRLLKEEL 1125
                DR R L+   L
Sbjct: 1004 ---QDRKRELIDSAL 1015



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 29/182 (15%)

Query: 590 LAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH 649
           L   + AL L +  P +S  +   + TLI+ P  L+  W  +I   + P      V+  H
Sbjct: 420 LGKTVQALALLVTRPPESKSV---KTTLIITPVSLLQQWHNEILTKIAPSH-RPTVYIHH 475

Query: 650 KKPSAHSLA---WDYDVVITTFNRLSAEWGRR---KKS-------------PMMQVHWLR 690
                H +A     YD+V+TT+N ++ E+  +    KS             P  +  W R
Sbjct: 476 GSSKKHKIAEQLMSYDIVLTTYNVIAYEFKNKMAYDKSIEDNAPIKKFEHLPFFEAEWYR 535

Query: 691 VMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEA 750
           V+LDE  T+ +   L  +      L ++ RW L+GTP  N     +     ++KFL  + 
Sbjct: 536 VILDEAQTIKNRNTLAAR--GCCLLESTYRWCLSGTPMQNG----VEEFYSLIKFLRIKP 589

Query: 751 YG 752
           Y 
Sbjct: 590 YS 591


>gi|425767825|gb|EKV06379.1| SNF2 family helicase/ATPase, putative [Penicillium digitatum Pd1]
 gi|425769621|gb|EKV08111.1| SNF2 family helicase/ATPase, putative [Penicillium digitatum PHI26]
          Length = 1190

 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 2/124 (1%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            P K ++FS +  H+ +IE  L   G+  +A +   M  + + K+L+ F ++ +   LL  
Sbjct: 1034 PIKSVVFSGWTSHLDLIEVALHNNGLDGYARLDGTMSLAARTKALEEFANNDNITVLLAT 1093

Query: 1050 -GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             G+  + L+L+  +RVF+MEP ++ +   Q I R HR+G TRP+      M+G++EE+++
Sbjct: 1094 IGAGGVALNLTSASRVFIMEPQYNPAAVAQAIDRVHRLGQTRPVQTFQFVMKGSIEEKIM 1153

Query: 1109 EFLQ 1112
            E  +
Sbjct: 1154 ELAK 1157



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 11/149 (7%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           +R TL+VVP   V +W TQI  H++   +  +++    + +   +  +YD++ITT++ + 
Sbjct: 610 TRTTLLVVPLSAVSNWVTQITDHLKLRCIRYYIFHGPSRITDFKVLSEYDIIITTYSTIL 669

Query: 673 AEWGRR-----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
           +E   R     K SP+ +++  R++LDE H +        K    + L +  RW +TGTP
Sbjct: 670 SEISGRGAKSGKLSPLTKMNMFRIVLDEAHIIREQNAAQTK--AILGLNSERRWSVTGTP 727

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQK 756
             N    ++  L  + KFL    Y Q  +
Sbjct: 728 IQN----RMEDLLSVTKFLRIAPYDQRSQ 752


>gi|295675065|ref|XP_002798078.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226280728|gb|EEH36294.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1074

 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 12/203 (5%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF----N 669
           + TL+V P   V +W +QI++H+  G L  +V+    +    +    YD+VITT+    +
Sbjct: 512 KTTLLVCPLSAVGNWVSQIEEHLEAGALSYYVFHGPTRTEDPAELSKYDLVITTYSTILS 571

Query: 670 RLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTP 729
            LS +  +R  SP+ +++  R++LDE HT+        + Q   +L A  RW +TGTP  
Sbjct: 572 ELSGKNAKRGTSPLTRMNMFRIVLDEAHTIRE--QSAGQSQAIFALDAQRRWSVTGTPIQ 629

Query: 730 NTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISAR 789
           N    +L  L  + +FL    Y +  + +   I+ PF++E  +    L  L+    +  R
Sbjct: 630 N----RLEDLASVTRFLRLHPYIEKAQ-FATYIIAPFKSENPKAIPNLRMLVDSFTLR-R 683

Query: 790 KTDLQTIPLCIKEVTFLNFTEEH 812
             D   +P    ++  L F+++ 
Sbjct: 684 IKDRINLPPRHDKIITLTFSQQE 706



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 2/135 (1%)

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGI-KFAGMYSPMHSSNKIKSLDM 1036
            D    + +S +  P K I+FS +  H+ +I+  L   GI  F  +   M    +  +LD 
Sbjct: 905  DTIEESKKSPEKAPIKSIVFSSWTSHLDLIQIALEDNGITSFTRLDGTMSLKQRNAALDA 964

Query: 1037 FRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
            FR D +   LL   G+  +GL+L+  +R ++MEP ++ +   Q + R HR+G TR +   
Sbjct: 965  FRDDDNVTILLATLGAGGVGLNLTSGSRAYIMEPQYNPAAIAQAVDRVHRLGQTREVTTI 1024

Query: 1096 TLAMRGTVEEQMLEF 1110
               M+ ++EE++ E 
Sbjct: 1025 QFIMKDSIEEKIAEL 1039



 Score = 48.1 bits (113), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 8/93 (8%)

Query: 161 PCMKLKLFPHQQAAVEWMLHRE-----WNAEVLRHPLYIDLATEDGFYFYVNTVSGDIAT 215
           P +K  L PHQ+ A+ +ML +E        E   + L+      +G  FY   +SG  + 
Sbjct: 397 PMIKTPLLPHQRQALWYMLQKEKPRKFGENEAENNSLWRIQHQPNGQKFYREIISGVTSF 456

Query: 216 GTAPTMRDFHGGMFCDEPGLGKTITALSLILKT 248
              P +   +GG+  D  GLGKT++ LSL++ T
Sbjct: 457 EEPPQV---YGGLLADVMGLGKTLSILSLVMST 486


>gi|350562462|ref|ZP_08931296.1| SNF2-related protein [Thioalkalivibrio thiocyanoxidans ARh 4]
 gi|349779404|gb|EGZ33750.1| SNF2-related protein [Thioalkalivibrio thiocyanoxidans ARh 4]
          Length = 1370

 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 69/118 (58%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            + ++FSQF++H++++   L   GI +  +     +S + + +  F+  A  L L+   + 
Sbjct: 1218 RALVFSQFVDHLNLVRAALDQRGIPYQYLDGSTPASARAERVAAFQGGAGDLFLISLKAG 1277

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+    V  ++P W+ ++E+Q   RAHR+G  RP+ V  L MRG++EE++++ 
Sbjct: 1278 GTGLNLTAADYVIHLDPWWNPAVEDQASDRAHRIGQQRPVTVYRLVMRGSIEERIIDL 1335


>gi|354476892|ref|XP_003500657.1| PREDICTED: transcription termination factor 2 [Cricetulus griseus]
 gi|344249698|gb|EGW05802.1| Transcription termination factor 2 [Cricetulus griseus]
          Length = 1115

 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 29/160 (18%)

Query: 606 DSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVI 665
           D   ++ S  TLIV P+ L+ HWK ++++ V   +L ++++    +     +   YD+VI
Sbjct: 587 DDSSVFTSNGTLIVCPASLIHHWKNEVEKRVNSNKLRIYLYHGPNRNRQAKVLSTYDIVI 646

Query: 666 TTFNRLSAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTN-KL 709
           TT++ L+ E    K+               +P++QV W R++LDE H      N+ N ++
Sbjct: 647 TTYSLLAKEIPTMKQEGEVPGANLSVEGISAPLLQVVWARIILDEAH------NVKNPRV 700

Query: 710 QMAIS---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           Q +I+   L A  RW +TGTP  N     L  +  ++KFL
Sbjct: 701 QTSIAVCKLQAQARWAVTGTPIQNN----LLDMYSLMKFL 736



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 3/146 (2%)

Query: 968  WSNTNTFLKQDLYRPNLESNKALP--DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPM 1025
            + NT    K       LE+ +  P   K +I SQ+   + V+   L   G+ ++ +   +
Sbjct: 937  FDNTRKSTKVSSLLAELEAIRKGPGSQKSVIVSQWTSMLQVVALHLKKHGLTYSTIDGSV 996

Query: 1026 HSSNKIKSLDMFRHDASCLALLMDG-SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAH 1084
            +   ++  ++ F H      +L+   +  +GL+L+    +FL++  W+ S+E+Q   R +
Sbjct: 997  NPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIY 1056

Query: 1085 RMGATRPIHVETLAMRGTVEEQMLEF 1110
            R+G  + + V      GTVEE++L+ 
Sbjct: 1057 RVGQEKDVVVHRFVCEGTVEEKILQL 1082


>gi|150864093|ref|XP_001382790.2| ATPase/DNA helicase [Scheffersomyces stipitis CBS 6054]
 gi|149385349|gb|ABN64761.2| ATPase/DNA helicase [Scheffersomyces stipitis CBS 6054]
          Length = 1127

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 13/129 (10%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAG------IKFAGMYSPMHSSNKIKSLDMFR----HDA 1041
            +KVI+FSQF  ++ ++E +L + G       KF G    +  S + K LD F     HD 
Sbjct: 970  EKVIVFSQFSSYLDILENELKIQGGRDFVIHKFDGR---LQLSERQKVLDKFNDNTGHDG 1026

Query: 1042 SCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRG 1101
              + LL   +  +GL+L+  +R F+M+P W  S+E+Q I R HR+G    + V    M  
Sbjct: 1027 VTILLLSLKAGGVGLNLTTASRAFMMDPWWSPSVEDQAIDRIHRIGQNETVKVVRFIMSN 1086

Query: 1102 TVEEQMLEF 1110
            ++E +ML+ 
Sbjct: 1087 SIETKMLKI 1095



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 25/200 (12%)

Query: 585 KTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQ-HVRPGQL-H 642
           KT+  LA   +    A  E   S + Y S+ TL+VVP  L++ WK++  + +  P    H
Sbjct: 505 KTISALALINSVPYSATEEARISTKPYASKTTLVVVPMSLLNQWKSEFDKTNNNPNHFCH 564

Query: 643 LFVWTDHKKPS---AHSLAWDYDVV-ITTFNRLSAEWGRRKKS----------PMMQVHW 688
           ++        S    ++ A D  VV +TT+  +  E+ R  KS           +  V +
Sbjct: 565 IYYGGQTSSLSYLLVNNKAKDVPVVMLTTYGTILNEYTRLAKSRDPNGNLSPVGLYSVDY 624

Query: 689 LRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
            R++LDEGH +    N + K   AI  L +S RW+LTGTP  N    +L  L  +++FL 
Sbjct: 625 FRIILDEGHNIR---NRSTKTAKAIYELASSRRWILTGTPIIN----RLDDLYSLVRFLD 677

Query: 748 EEAYGQNQKAWDGGILRPFE 767
            + +  N   W   +  PFE
Sbjct: 678 LDPWS-NFSYWKTFVTLPFE 696



 Score = 43.9 bits (102), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 26/43 (60%)

Query: 203 YFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           YFY N  +G+++           GG+  DE GLGKTI+AL+LI
Sbjct: 471 YFYANMYNGEMSQEKPIIKSSLKGGILADEMGLGKTISALALI 513


>gi|410619635|ref|ZP_11330529.1| helicase [Glaciecola polaris LMG 21857]
 gi|410160767|dbj|GAC34667.1| helicase [Glaciecola polaris LMG 21857]
          Length = 1435

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 1/131 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K +IFSQF+ H+H+I+Q +   G ++  +        + +S++ F+     + L+   + 
Sbjct: 1284 KALIFSQFVGHLHLIKQHIEAKGFRYQYLDGSTPQKQRQQSVNAFQRGEGDIFLISLKAG 1343

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
              GL+L+    V  M+P W+ ++EEQ   RAHR+G  RP+ +  L  + T+EE+++   Q
Sbjct: 1344 GSGLNLTAADYVIHMDPWWNPAVEEQASDRAHRIGQLRPVTIYRLITQNTIEEKIVALHQ 1403

Query: 1113 -DTDRCRRLLK 1122
               D   RLL+
Sbjct: 1404 HKRDLADRLLE 1414


>gi|388857664|emb|CCF48813.1| uncharacterized protein [Ustilago hordei]
          Length = 991

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 2/127 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K I+FSQF   ++++E  L      +      M   ++ ++L+  R D S   +L+   
Sbjct: 835  EKTIVFSQFTSFLNIVEPHLRQHHFNYVRYDGSMKPQDREQALERIRSDPSITVILISFK 894

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S GL+L+  +RV LM+  W+  +EEQ   RAHR+G  R + +  L+++ TVEE++L+ 
Sbjct: 895  AGSTGLNLTSCSRVILMDLWWNPQIEEQAFDRAHRLGQQRDVTIYKLSIKDTVEERILK- 953

Query: 1111 LQDTDRC 1117
            LQ+  R 
Sbjct: 954  LQEKKRA 960


>gi|168705379|ref|ZP_02737656.1| swi/snf family helicase_2 [Gemmata obscuriglobus UQM 2246]
          Length = 612

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 15/126 (11%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKS------LDMFRHDASCLAL 1046
            K IIFSQ++E + V+ + L          Y P+    KI        LD F+ D S   L
Sbjct: 453  KAIIFSQWVEPLEVLAKAL--------AKYGPLQYHGKIPQPQRTPILDRFKSDPSAHVL 504

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            LM  G+ S+GL+L F   VFL +  W+ ++E+Q I+RAHR+G   P+ V      GT+E 
Sbjct: 505  LMSYGTGSVGLNLQFTNYVFLFDRWWNPAIEDQAINRAHRLGQKHPVTVTRFLSGGTIEG 564

Query: 1106 QMLEFL 1111
            ++ + L
Sbjct: 565  RIADIL 570


>gi|149177854|ref|ZP_01856453.1| Snf2 family protein [Planctomyces maris DSM 8797]
 gi|148843344|gb|EDL57708.1| Snf2 family protein [Planctomyces maris DSM 8797]
          Length = 1110

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 3/138 (2%)

Query: 976  KQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLD 1035
            K D+  P+LE       K ++FSQF   + ++++ L    I +   Y    + ++ + +D
Sbjct: 945  KMDVLIPHLEELIEEGHKALVFSQFTSMLSIVQEHLDQKNIVYE--YLDGQTRDRKERVD 1002

Query: 1036 MFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
             F+ D  C   L+   +  LGL+L+    VF+++P W+ ++E Q I RAHR+G T+ +  
Sbjct: 1003 RFQTDKDCGVFLISLKAGGLGLNLTAADYVFILDPWWNPAVETQAIDRAHRVGQTKRVFA 1062

Query: 1095 ETLAMRGTVEEQMLEFLQ 1112
              L  R TVEE++ E  Q
Sbjct: 1063 YKLICRNTVEEKITELQQ 1080


>gi|330845768|ref|XP_003294743.1| hypothetical protein DICPUDRAFT_100046 [Dictyostelium purpureum]
 gi|325074740|gb|EGC28734.1| hypothetical protein DICPUDRAFT_100046 [Dictyostelium purpureum]
          Length = 1445

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 31/227 (13%)

Query: 614  RATLIVVPSYLVDHWKTQIQQHVRP---GQLHLF-VWTDHKKPSAHSLAWD-YDVVITTF 668
            R TLI+ P+ L   WK++ ++H++P    QL +   W  ++K     L     D+VITT 
Sbjct: 848  RTTLIICPATLCSQWKSEFKKHLKPEHYNQLSILDYWGPNRKKKLVGLDLSLVDIVITTH 907

Query: 669  NRLSAEWGRRKKS-----------PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTA 717
                 EW + +K            P+  +HW RV++DE     +   +   LQ   ++ +
Sbjct: 908  GSFGLEWKKYEKEVQNGNSGISVPPLWSIHWWRVIVDESQVCRAKTLIFKGLQ---NIDS 964

Query: 718  SNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL 777
             +RW LTGTP  N     L  + PML FL+     +N + W   + +P    +      L
Sbjct: 965  IHRWCLTGTPVQNY----LEEMFPMLNFLNVFPIAENMRTWRRLVDKPKNITL------L 1014

Query: 778  LQLLHRCMISARKTDLQTIPLCIKEVT--FLNFTEEHAGTYNELVVT 822
             Q+L+  ++   K + +   L  K  +  +L F E     Y  L  T
Sbjct: 1015 KQVLNPILLRRTKDEAKETKLPQKHYSTAYLEFDEYEKEDYAVLFTT 1061



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 5/150 (3%)

Query: 966  RQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAG----IKFAGM 1021
            R +S     L QDL+   L   +   +K I+FSQ+   + +IE      G    I ++  
Sbjct: 1250 RLFSTKIKQLIQDLHTDMLNDKEKEDEKCIVFSQWTSMLSLIENIFIENGWKKNIHYSRF 1309

Query: 1022 YSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVI 1080
               + S  + + L  F  D     +LM      +GL+L+   RV+LM+P W+ +++ Q I
Sbjct: 1310 DGTLTSVQRDRVLQAFNQDDGPRVMLMGLRCGGVGLNLTRANRVYLMDPWWNIALQNQAI 1369

Query: 1081 SRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             R HRMG  + ++V+   M  ++E ++L+ 
Sbjct: 1370 GRVHRMGQKKEVYVKNYIMEESIEIRILQL 1399



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)

Query: 170 HQQAAVEWMLHREWNAEV-LRHPLYID---LATEDGFYFYVNTVSGDIATGTAPTMRDFH 225
           HQ+  + WM  RE    V     +Y +     T +G  FY N V   I+  +  +     
Sbjct: 728 HQREGLWWMFSREQKPSVTYSDAIYENWRIYKTAEGIDFYYNYVCDKISLKSPTSRHKIA 787

Query: 226 GGMFCDEPGLGKTITALSLILKT 248
           GG+ CDE GLGKT+ +++LI++ 
Sbjct: 788 GGLLCDEMGLGKTVMSIALIMQN 810


>gi|358056644|dbj|GAA97307.1| hypothetical protein E5Q_03985 [Mixia osmundae IAM 14324]
          Length = 734

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF+  + ++   +  AG K+   +  M+++ +  SLD  R+D     +L+    
Sbjct: 582  KTIVFSQFVTFLDLVGPHIEKAGFKYVRYHGSMNNTKREASLDKIRNDPDVSVILISLKC 641

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             +LGL+L+    V + +  W+ ++EEQ I RAHR G    ++V  L + GTVE+++L+ L
Sbjct: 642  GALGLNLTACCNVIMSDLWWNPAVEEQAIDRAHRFGQIEDVNVYKLVIEGTVEDRILK-L 700

Query: 1112 QDTDR 1116
            QD  R
Sbjct: 701  QDDKR 705



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 52/240 (21%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS----AHSLAWDYDVVITTFN 669
           R TLIV P  L+  W+++I+  ++P  L + V   H  PS    AH +   Y VVITT+ 
Sbjct: 216 RGTLIVAPLALIRQWESEIRAKIKPDTLRVLV---HHGPSRTRDAHKMG-KYHVVITTYE 271

Query: 670 RLSAEW-------------------------GRRKKSPMMQVHWLRVMLDEGHTLGSSLN 704
            + +E+                           ++  P+ +  + R++LDE HT+ +   
Sbjct: 272 VVLSEYVPDSEDVEVRAIASDSDDSVKMVRTKSKRSGPLFETAFHRIILDEAHTIKN--R 329

Query: 705 LTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILR 764
           L  K +    L AS RW LTGTP  N+    +  L  + KFL  +    +   +    + 
Sbjct: 330 LAKKSKACFDLVASFRWCLTGTPIQNS----IEDLYSLFKFLRVKPL-DDLAHFKSKFVT 384

Query: 765 PFEAE------MEEGRSRLLQLLHRCMISARKTD------LQTIPLCIKEVTFLNFTEEH 812
           P +A       ME    R+  +L   M+   KT       + T+P  I ++    FT++ 
Sbjct: 385 PMKANKQSTAAMETAIKRIRVVLAAVMLRRTKTSQIDGKPIITLPQRIVQLRQTPFTDKQ 444


>gi|358399343|gb|EHK48686.1| hypothetical protein TRIATDRAFT_11002, partial [Trichoderma
            atroviride IMI 206040]
          Length = 676

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 186/465 (40%), Gaps = 97/465 (20%)

Query: 613  SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH---KKPSAHSLAWDYDVVITTFN 669
            S  TLI+VP  L+  W+ Q+      G L+   W  H    K S + L    ++V+TT++
Sbjct: 242  SATTLIIVPPPLLGTWEEQLSDS---GTLN---WCRHHGKTKLSGNMLYNGINIVLTTYH 295

Query: 670  RLSAEW---GRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
             +SAEW   G    S +    W RV+LDE H + +S +   +   AI+  A+ RW +TGT
Sbjct: 296  TVSAEWKSHGEHSPSILFSTRWRRVILDEAHFIRNSSSQLTRATCAIN--AAARWAVTGT 353

Query: 727  PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF-EAEMEEGRSRLLQLLHRCM 785
            P  N    +LS L  +L FL    Y   +K +D  I   + E   +E   RL +L    +
Sbjct: 354  PIQN----RLSDLTTLLSFLRVYPYSY-RKHFDADITNLWKEGNADEALKRLKRLAAYLI 408

Query: 786  ISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNEL--VVTVRRNILMADWNDPSHVESLLN 843
            +   +  +Q +PL       + FT+     Y E+      R + ++ + ND +     +N
Sbjct: 409  LRRTQNTIQ-LPLRRDLQCAVEFTDAEREVYEEIRNTTIARIDDMLYESNDDARPLEYIN 467

Query: 844  PKQWKFRSTTIRNLRLSCCVAGHI------------KVTDAGEDIQETMDVLVENGLDPL 891
              Q       I  +R+ C +  H             K+ +     Q+T ++  E G   +
Sbjct: 468  VLQ------QIEAMRMVCNLGLHYHGRRNLGAIAQNKLDNWATAAQQTFNLQGEMG--GM 519

Query: 892  SQEYAF----IKYNLLNG---------GNCLRHILCLDCVAMDS---------------- 922
               Y F       +LLN            CL+ ++C DC+ M                  
Sbjct: 520  QCRYCFTVADTSASLLNDTQSQQPFQLSKCLQ-LICFDCINMKQPIDCGHSPPCDFARVY 578

Query: 923  ------EKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSNT---NT 973
                  E+ SLP   F +    P+ L  P  P     V Q L  L P  ++ + T   + 
Sbjct: 579  LNANNLEETSLPTNHFEHAASLPQTLKFP--PKVTALVAQ-LKTLPPGVKRLTLTVASHA 635

Query: 974  FLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKF 1018
            FL +  + P LE             Q L  I+ + Q+  V  ++F
Sbjct: 636  FLMEPHWNPTLE------------DQALARIYRLGQRNEVTTVRF 668


>gi|322698671|gb|EFY90439.1| SNF2 family helicase/ATPase, putative [Metarhizium acridum CQMa 102]
          Length = 1104

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + ++E  L   G ++A     M + ++ +SL   R D S   LL     
Sbjct: 908  KFIVFSQFTSMLDLVEPFLDKDGFEYARYDGSMKNDDREESLRRLREDQSTRVLLCSLKC 967

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +  TVEE++++ L
Sbjct: 968  GSLGLNLTAATRVIIVEPFWNPFVEEQAIDRVHRLTQTVDVVVYKLTVADTVEERIID-L 1026

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 1027 QNKKR 1031



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 88/194 (45%), Gaps = 24/194 (12%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + ++TL+V P  L+  W+ +I+  V     L + V    ++         YDVV+TTF  
Sbjct: 342 IEKSTLVVAPLALIRQWEHEIKDKVEESHGLKVLVHHGPQRTKDFKQLALYDVVVTTFQI 401

Query: 671 LSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLL 723
           L +E G         K+    + W RV+LDE H++    N   K   A  +L +  RW L
Sbjct: 402 LVSEHGASSDAENGIKAGCFGLRWWRVILDEAHSI---KNRNAKATKACCALRSEYRWCL 458

Query: 724 TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQ 779
           +GTP  N     L  LQ ++KFL    Y  + K W   I +P    M+ G+     R L 
Sbjct: 459 SGTPMQNN----LDELQSLIKFLRISPY-DDLKQWREHIDQP----MKNGKGHIAIRRLH 509

Query: 780 LLHRCMISARKTDL 793
            L RC +  R  ++
Sbjct: 510 SLLRCFMKRRTKEI 523


>gi|396460726|ref|XP_003834975.1| hypothetical protein LEMA_P071180.1 [Leptosphaeria maculans JN3]
 gi|312211525|emb|CBX91610.1| hypothetical protein LEMA_P071180.1 [Leptosphaeria maculans JN3]
          Length = 1473

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 107/264 (40%), Gaps = 54/264 (20%)

Query: 560 GFHKIFQAFGLI---RRVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRAT 616
           G  K  QA  LI    R EKG+     P+   N   D                    + T
Sbjct: 675 GLGKTVQAIALILSNPRPEKGVE----PENKKNKILDSTG-----------------KGT 713

Query: 617 LIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW 675
           L+V P  L+  W+ +I   V +  +L + V     +  +      YD+VITT+  L++E 
Sbjct: 714 LVVAPLALIKQWEAEINSKVAKSHELKVLVHHGPNRTKSADKLKQYDIVITTYQVLASEH 773

Query: 676 GRRKKSP------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTPT 728
                 P         VHW R MLDE HT+    N   K+  A   + +  RW LTGTP 
Sbjct: 774 ASCGDGPDGLKKGCFAVHWYRTMLDEAHTIK---NRNAKMTKACYEIRSHYRWCLTGTPM 830

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLHRC 784
            N     L  LQ ++KFL  + Y +   +W   I  P    M+ GR     R LQ+  + 
Sbjct: 831 QNN----LDELQSLIKFLRIQPYCE-MSSWKDSISGP----MKNGRGNLAMRRLQIFLKA 881

Query: 785 MISARKTDLQTIPLCIKEVTFLNF 808
            +  R  D+      +K+   LNF
Sbjct: 882 FMKRRTKDV------LKKDGALNF 899



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 66/125 (52%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            KVI+FSQF   + +IE  L  A   F      M +  +  SL   R+D     LL     
Sbjct: 1265 KVIVFSQFTSMLDLIEPFLKRADYNFTRYDGSMRNDLREASLAKLRNDKRTRVLLCSLKC 1324

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  +RV +MEP W+  +EEQ I R HR+  T  + V  L +  +VEE++ E L
Sbjct: 1325 GSLGLNLTAASRVVIMEPFWNPFVEEQAIDRVHRLNQTVDVTVYRLLINNSVEERIQE-L 1383

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 1384 QEAKR 1388


>gi|449137860|ref|ZP_21773169.1| SNF2-related protein [Rhodopirellula europaea 6C]
 gi|448883527|gb|EMB14051.1| SNF2-related protein [Rhodopirellula europaea 6C]
          Length = 1386

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 11/146 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            KV++FSQF+ H+ ++  +L    I +  +     +  +  S+D F+     + L+   + 
Sbjct: 1238 KVLVFSQFVGHLQLLRDRLDERKISYQYLDGSTPAKKRKTSVDAFQDGEGDVFLISLKAG 1297

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE--- 1109
             +GL+L+    V  M+P W+ ++E+Q   RAHRMG  RP+ V      GT+EE++L+   
Sbjct: 1298 GVGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQQRPVTVYRFITTGTIEERILQLHE 1357

Query: 1110 --------FLQDTDRCRRLLKEELVK 1127
                     L+ T+   +L  EEL+K
Sbjct: 1358 SKRDLADSLLEGTESSAKLSAEELMK 1383



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 58/270 (21%), Positives = 110/270 (40%), Gaps = 30/270 (11%)

Query: 599  LALCEPLDSVRLYLSRA----TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA 654
            + L + L  + + L+R      L+V P+ +  +W ++I +     +  LF   D ++   
Sbjct: 961  MGLGKTLQCLAVLLNRGKSGPALVVAPTSVAANWVSEIARFAPSLRPILFSEAD-RETVV 1019

Query: 655  HSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
             SL    D++I ++  L+ E  +     +    W  ++LDE   + ++   T + + A+ 
Sbjct: 1020 ESLG-KRDLLICSYGLLANEAQK-----LQSRRWQTLVLDEAQAIKNAE--TKRSEAAMG 1071

Query: 715  LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGR 774
            L A  R +LTGTP  N     L  L  + +F++    G ++ ++      P E +     
Sbjct: 1072 LEADFRIVLTGTPMEN----HLGELWNLFQFINPGLLGSSE-SFQERFAIPIERDHRRDV 1126

Query: 775  SRLLQLLHRCMISARKTD--LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
             R L+ L    I  R     L  +P   +    +   E  A  Y  +     +N+  +D 
Sbjct: 1127 QRQLKQLIAPFILRRTKSQVLDELPPRTEITVPIELGENEAAMYEAIRQKALQNLEDSDD 1186

Query: 833  NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
            + P H++ L            +  LR  CC
Sbjct: 1187 DRPMHIKIL----------AELMRLRRFCC 1206


>gi|371781720|emb|CCD27753.1| predicted SNF2/helicase domain-containing protein [Stigmatella
            aurantiaca Sg a15]
          Length = 1291

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 11/145 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF  H+ ++ +++  AG  +  +        + K +  F+     + L+   + 
Sbjct: 1122 KALVFSQFTSHLELVREEVERAGFTYQYLDGSTALGARAKRIQAFQDGEGDVFLISLKAG 1181

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML---- 1108
              G++L+    V  ++P W+ ++E+Q   RAHR+G TRP+ V  L  RGT+EE++L    
Sbjct: 1182 GTGINLTAADYVIHLDPWWNPAVEDQATDRAHRIGQTRPVTVYRLIARGTIEEKILSLHS 1241

Query: 1109 -------EFLQDTDRCRRLLKEELV 1126
                   E L+ TD   RL  ++L+
Sbjct: 1242 DKRALVAEVLEGTDAAARLTTKDLL 1266


>gi|358400218|gb|EHK49549.1| hypothetical protein TRIATDRAFT_270730 [Trichoderma atroviride IMI
           206040]
          Length = 563

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 8/135 (5%)

Query: 613 SRATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           S+ATLI+ PS  L+D W  +I +H  PG+L         + +  +L  +  VV TT+  +
Sbjct: 134 SKATLIITPSSLLIDTWVDEIHKHAYPGKLPFHKHLGSSRHAEANLLRERLVVFTTYATV 193

Query: 672 SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
           +AE+ RR  + + +++W R++LDE H + +    T + +   SL+A +RW LTGTP  N+
Sbjct: 194 AAEF-RRGDTTLQKINWFRIVLDEAHDIRNC--STKQYKAVTSLSAQHRWCLTGTPIQNS 250

Query: 732 PNSQLSHLQPMLKFL 746
               L  L  ++ FL
Sbjct: 251 ----LEGLAALVSFL 261



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 1/119 (0%)

Query: 988  KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALL 1047
            ++L  K IIFS + + + ++ Q L    ++ A     +  + + K L  F+       LL
Sbjct: 390  QSLNHKSIIFSCWKKTLGLVSQLLDSHAVQHAMRDGSLALAERSKVLKDFQSPTGTNILL 449

Query: 1048 MD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            M  G+ ++GL+L+  +R++L+EP W+ S+E Q I RA R+G    + +    M  TVEE
Sbjct: 450  MTLGTGAVGLNLAVASRIYLLEPQWNPSIESQAIGRAFRLGQKDQVVIIRYVMMHTVEE 508



 Score = 42.4 bits (98), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 151 HLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPL--YIDLATEDGFYFYVNT 208
           H+   A S+   +K KL  HQ+ A++++  RE    +    L  Y D   E+ FY +V T
Sbjct: 16  HVHQQAISVSLDIKSKLRLHQKEAIDFIFRRETGQVLPERSLWKYNDTDAEEPFYQHVFT 75

Query: 209 VSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
                     P   +  GG+  DE GLGK++  LS +
Sbjct: 76  ------GAKRPERIEAKGGIIADEMGLGKSLIILSTV 106


>gi|322711118|gb|EFZ02692.1| SNF2 family helicase/ATPase, putative [Metarhizium anisopliae ARSEF
            23]
          Length = 1235

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + ++E  L   G ++A     M + ++ +SL   R D S   LL     
Sbjct: 1039 KFIVFSQFTSMLDLVEPFLDKDGFEYARYDGSMKNDDREESLRRLREDQSTRVLLCSLKC 1098

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +  TVEE++++ L
Sbjct: 1099 GSLGLNLTAATRVIIVEPFWNPFVEEQAIDRVHRLTQTVDVVVYKLTVADTVEERIID-L 1157

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 1158 QNKKR 1162



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 16/190 (8%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           L + TL+V P  L+  W+ +I+  V     L + V    ++         YDVV+TTF  
Sbjct: 472 LEKTTLVVAPLALIRQWEHEIKDKVEKSHGLKVLVHHGPQRTKDFKQLALYDVVVTTFQI 531

Query: 671 LSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLL 723
           L +E G         K+    + W RV+LDE H++    N   K   A  +L +  RW L
Sbjct: 532 LVSEHGASSDAENGVKAGCFGLRWWRVILDEAHSI---KNRNAKATKACCALRSEYRWCL 588

Query: 724 TGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR 783
           +GTP  N     L  LQ ++KFL    Y  + K W   I +P +        R L  L R
Sbjct: 589 SGTPMQNN----LDELQSLIKFLRISPY-DDLKQWREHIDQPMKNGKGHIAIRRLHSLLR 643

Query: 784 CMISARKTDL 793
           C +  R  ++
Sbjct: 644 CFMKRRTKEI 653


>gi|345560188|gb|EGX43313.1| hypothetical protein AOL_s00215g49 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1080

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K I+FS F   + +IE  L    I++      M +  + +SL+  R+  SC  LL    
Sbjct: 857  NKTIVFSAFTSMLDMIEPFLKHRSIRYVRYDGKMKNDERERSLETLRNSESCQVLLCSLK 916

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +LGL+L+   RV ++EP W+  +EEQ I R HR+G T  + V  +++  T+E ++ E 
Sbjct: 917  CGALGLNLTAANRVVILEPFWNPFVEEQAIDRVHRIGQTSDVVVYRMSVENTIESRIQE- 975

Query: 1111 LQDTDR 1116
            LQD  R
Sbjct: 976  LQDRKR 981



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 17/157 (10%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTFNR 670
           + TLIV P  L+  W+ +I+     G+  + V   H  P+      D   YDVV+TT   
Sbjct: 310 KGTLIVAPLALIKQWEKEIKDKT-DGRFRVLV---HHGPARTRSGKDLKAYDVVVTTPQV 365

Query: 671 LSAEWGRRKKSPM---MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
           L +E        +   + V W RV++DE HT+ +  +L        +L +  RW LTGTP
Sbjct: 366 LVSEHKDSVPDALIGCLDVRWWRVIIDEAHTIKN--HLAKSTIACYALRSHYRWCLTGTP 423

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILR 764
             N     +  LQ +++FL  + Y    K W   I R
Sbjct: 424 LQNN----VDELQSLIRFLRVDPYADKGK-WKQDITR 455


>gi|422293546|gb|EKU20846.1| ring finger-like protein, partial [Nannochloropsis gaditana CCMP526]
          Length = 92

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/68 (52%), Positives = 45/68 (66%)

Query: 1040 DASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAM 1099
            D     LL+    S GLDLS  T VFLM+ IWD +++ QV+SRA+RMGA   +HVE L M
Sbjct: 2    DEGLQVLLIGKEGSHGLDLSLATHVFLMDQIWDENLQNQVVSRAYRMGAQASVHVERLVM 61

Query: 1100 RGTVEEQM 1107
            + TVEE M
Sbjct: 62   QDTVEEAM 69


>gi|353236549|emb|CCA68541.1| related to RAD16-nucleotide excision repair protein [Piriformospora
            indica DSM 11827]
          Length = 1309

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+   +  IE  L  AGI +  +   M    + K+LD  ++D  C  LL+   +
Sbjct: 1149 KSVVFSQWTSMLDKIEDALETAGIYYERLDGGMKREERNKALDALKNDPKCEVLLVSLKA 1208

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL L+    V+LM+P W+ ++E Q I R HR+G   P+      +  ++E+++LE 
Sbjct: 1209 GGVGLTLTAARNVYLMDPYWNPAVENQAIDRIHRLGQIHPVVSTKFIIENSIEQRLLEV 1267



 Score = 43.9 bits (102), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 18/148 (12%)

Query: 681 SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
           SP+  ++W RV+LDE H +     + ++      L A  R  LTGTP  N    ++  + 
Sbjct: 733 SPLQAIYWFRVVLDEAHFIKEPTTVASR--ACCDLVADRRLCLTGTPLQN----KVDDVY 786

Query: 741 PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD-------- 792
            ++KFL  + + + +  W   I  P +     G +RL  ++   +++ R+T         
Sbjct: 787 ALIKFLRVKPFDE-KGIWTNLIGGPIKYNQAVGFTRLQTIMR--LLALRRTKETKDQNGK 843

Query: 793 -LQTIPLCIKEVTFLNFTEEHAGTYNEL 819
            + T+P     +  L   +E    Y+  
Sbjct: 844 PILTLPPRTDRMVLLKLQDEERTIYDSF 871


>gi|108762463|ref|YP_629793.1| SNF2/helicase domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108466343|gb|ABF91528.1| SNF2/helicase domain protein [Myxococcus xanthus DK 1622]
          Length = 1208

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 11/145 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            + ++FSQF  H+ ++ + L   GI +  +     +  + + +  F+     L L+   + 
Sbjct: 1044 RALVFSQFTSHLALVREVLDAEGIDYEYLDGQTPAGARAERVRAFQEGDVPLFLISLKAG 1103

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF-- 1110
              GL+L+  T V  ++P W+ ++E+Q   RAHR+G  RP+ V  L  RGT+EEQML    
Sbjct: 1104 GFGLNLTAATTVIHLDPWWNPAVEDQASDRAHRIGQERPVTVYRLVTRGTIEEQMLSLHE 1163

Query: 1111 ---------LQDTDRCRRLLKEELV 1126
                     L+  D   RL  +EL+
Sbjct: 1164 HKRALVAGVLEGKDAAGRLSTQELL 1188


>gi|405981099|ref|ZP_11039428.1| hypothetical protein HMPREF9240_00434 [Actinomyces neuii BVS029A5]
 gi|404393118|gb|EJZ88175.1| hypothetical protein HMPREF9240_00434 [Actinomyces neuii BVS029A5]
          Length = 1006

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 81/134 (60%), Gaps = 11/134 (8%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRH-DAS--CLALLMD 1049
            K ++FSQF +++  +  Q+  AG+K +  Y    ++N+ +++  F   DA   C++L   
Sbjct: 859  KALVFSQFTKYLKRVRAQIEAAGMKTS--YLDGATTNRPRAIAQFSEGDAQVFCISLRAG 916

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            G+   GL L+    V++M+P W+ ++EEQ I RAHR+G T+P++V  L    TVE++++E
Sbjct: 917  GT---GLTLTEADYVYIMDPWWNPAVEEQAIDRAHRLGQTKPVNVYRLVATDTVEQKVME 973

Query: 1110 FLQDTDRCRRLLKE 1123
                 +R ++LL +
Sbjct: 974  L---KERKQQLLGQ 984


>gi|299754942|ref|XP_001828302.2| hypothetical protein CC1G_02883 [Coprinopsis cinerea okayama7#130]
 gi|298410996|gb|EAU93653.2| hypothetical protein CC1G_02883 [Coprinopsis cinerea okayama7#130]
          Length = 928

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +KV+IFS ++  + ++ + L    IKF        +  +  +LD+  +D  C  +L+   
Sbjct: 781  EKVVIFSSYVTLLELLGECLDARRIKFIEFNGKKSTHERTGALDVIANDPRCHVMLISLK 840

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + S+GLD++    V LM+P W+  +EEQ ISR HR G TRP+ V  +    T+E ++ E 
Sbjct: 841  AGSVGLDITSCNNVILMDPWWNPFVEEQAISRVHRFGQTRPVTVYRIITPDTIEPRIQEI 900

Query: 1111 LQD 1113
             Q+
Sbjct: 901  QQE 903


>gi|87307136|ref|ZP_01089281.1| swi/snf family protein [Blastopirellula marina DSM 3645]
 gi|87289876|gb|EAQ81765.1| swi/snf family protein [Blastopirellula marina DSM 3645]
          Length = 589

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 20/223 (8%)

Query: 921  DSEKCSLPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIELQPSYRQWSN----TNTFLK 976
            D++    P     YE+   E + R E    +  V Q + EL    +Q  N    T    K
Sbjct: 353  DADLTLSPAQQETYELAENEGIVRLEKMGEELTV-QHVFELVLRLKQICNFDPRTGDSTK 411

Query: 977  QDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKS--- 1033
             D  R ++E   A   K I+FSQ+ + I  I +QL   G        P+    KI S   
Sbjct: 412  MDQLRADMEEVVASGKKAIVFSQWTQTIEQIRRQLEPFG--------PLEYHGKIPSKKR 463

Query: 1034 ---LDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGAT 1089
               ++ F+HD S   +LM  G+ S+GL+L F   VFL +  W+ ++E+Q I+RAHR+GA 
Sbjct: 464  DGVIEQFKHDPSKSVILMSYGAGSVGLNLQFCEYVFLFDRWWNPAIEDQAINRAHRIGAK 523

Query: 1090 RPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREG 1132
              + +       T+E+++ + L +       L  E   P+  G
Sbjct: 524  GAVTISRYLAMNTIEDRIDQVLSEKRELFNTLFAEAGTPQPSG 566


>gi|449546139|gb|EMD37109.1| hypothetical protein CERSUDRAFT_155596 [Ceriporiopsis subvermispora
            B]
          Length = 651

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 2/127 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K IIFSQF   + +IE  L  AG+KF      M+   + ++L+  +  +S   +L+   
Sbjct: 491  EKTIIFSQFTSMLDIIEPFLKDAGVKFVRYDGSMNKIEREQALEKIKTSSSTRVILISFK 550

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S GL+L+    V L++  W+ ++E+Q   RAHR G  R +H+  L +  TVE+++LE 
Sbjct: 551  AGSTGLNLTCCNNVILIDLWWNPALEDQAFDRAHRFGQKRDVHIHKLCVPDTVEQRILE- 609

Query: 1111 LQDTDRC 1117
            LQ+  R 
Sbjct: 610  LQERKRA 616



 Score = 47.0 bits (110), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 84/220 (38%), Gaps = 57/220 (25%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH-----KKPSAHSLAWDYDVVITTFNR 670
           TL+V P  +V  W ++I++      + L V   H       P+A   A    VVIT++N 
Sbjct: 104 TLVVCPVAVVGQWASEIKKIA----IGLKVIEHHGSSRTSDPAALERA---HVVITSYNT 156

Query: 671 LSAEWGR--------------------------------------RKKSPMMQVHWLRVM 692
           +++E+G                                       +KK  + +V W R++
Sbjct: 157 VASEYGAYTESAKDEGTKTKSKKAADSDDSDSIRIARTVRKRAPAKKKDALFRVKWWRIV 216

Query: 693 LDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYG 752
           LDE H + +    T   Q    L  + RW LTGTP  N     +  L  +L FL      
Sbjct: 217 LDEAHNIKN--RSTKSAQACFKLDGNYRWCLTGTPMQNN----VEELFSLLHFLRVRPLN 270

Query: 753 QNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD 792
            N   +   I +P +A       + LQ++   ++  R  D
Sbjct: 271 -NWATFKSQIAQPVKAGKTARAMKRLQVVLASIMLRRTKD 309


>gi|261200100|ref|XP_002626451.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis
            SLH14081]
 gi|239594659|gb|EEQ77240.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis
            SLH14081]
          Length = 1150

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 2/128 (1%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P+K IIFSQF   + +++  +   G  +      M  S + +++  F        +L+  
Sbjct: 992  PEKTIIFSQFTTLLDLLQVPIEREGWGYCRYDGSMQPSERNEAVLEFSDSKDRTIMLISL 1051

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             + + GL+L+  ++V +++P W+  +EEQ I RAHR+G  RP+ V  + ++GTVE+++LE
Sbjct: 1052 KAGNSGLNLTVASQVIILDPFWNPYIEEQAIDRAHRIGQLRPVMVHRIFVKGTVEDRILE 1111

Query: 1110 FLQDTDRC 1117
             LQD  R 
Sbjct: 1112 -LQDRKRA 1118



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 47/265 (17%)

Query: 590 LAFDLAALRLALCEP-LDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWT 647
           L   L AL L +  P  D  R    + TLIV P  L+  WK +I++ ++P  QL +F+  
Sbjct: 500 LGKTLQALALMVSRPSTDPER----KTTLIVAPVALIQQWKREIERMLKPTHQLTVFILH 555

Query: 648 DHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVH-------------------- 687
           + +    ++L   YDVV+TT+  L++E  R + +  M+                      
Sbjct: 556 NERGVKYNNLKR-YDVVLTTYGTLASELKRLEVARRMRTENEHTYRNIDPDEKFSLPLLG 614

Query: 688 ----WLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPML 743
               W RV++DE   + +    T   Q    L ++ RW +TGTP  N     +S +  ++
Sbjct: 615 ERSTWYRVIIDEAQCIRN--KATKAAQACYRLKSTYRWCMTGTPMMNN----VSEIYSLI 668

Query: 744 KFLHEEAYGQNQK-AWDGGILR-----PFEAEMEEGRSRLLQLLHRCMISAR---KTDLQ 794
           KFL    Y   +K  +   +L+     P    M++ ++ L  +L R   S+    K  LQ
Sbjct: 669 KFLRIGPYNVLEKFNYTFSVLQRVNIPPGFPPMKKFQALLKAILLRRTKSSEIDGKRILQ 728

Query: 795 TIPLCIKEVTFLNFTEEHAGTYNEL 819
            +P    E T+  F+E+    Y+ L
Sbjct: 729 -LPPRTTEKTYATFSEDEESLYDAL 752


>gi|413919622|gb|AFW59554.1| putative SNF2-domain/RING finger domain/helicase domain protein [Zea
            mays]
          Length = 948

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 29/258 (11%)

Query: 911  HILCLDCV----AMDSEKCSLPGCGFLYEMQS---PEILTRPENPNPKW----------P 953
            H+ C  CV      D   C    CG     +S   P +L    +P P++           
Sbjct: 688  HVFCYQCVHERLTSDGHVCPYALCGNKLSFRSVFTPAVLKLCTSPKPEFGEETSCSTAAD 747

Query: 954  VPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNK--------ALPDKVIIFSQFLEHIH 1005
             P  + E      +  +    L   +  P L +          A P K I+FSQ+   + 
Sbjct: 748  KPSSICESSYISSKIRSAVEILNSIIKTPALTAGDTTESIPSMAPPVKAIVFSQWTGMLD 807

Query: 1006 VIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRV 1064
            ++E  L   GI+F  +   M    + K ++ F+ D     +LM   A +LGL++     V
Sbjct: 808  LLELSLNRNGIQFRRLDGAMSLDLREKEVNGFKTDPEVRVMLMSLKAGNLGLNMVAACHV 867

Query: 1065 FLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEE 1124
             +++P W+   E+Q + RAHR+G TRP+ V    ++ TVE+++L      ++ R +++  
Sbjct: 868  IMLDPWWNPYAEDQAVDRAHRIGQTRPVTVSRFTVKDTVEDRILAL---QEKKREMVESA 924

Query: 1125 LVKPEREGARSHRTLHDF 1142
              +    G  +  T+ D 
Sbjct: 925  FGEDGSRGTATKLTVEDL 942


>gi|380493847|emb|CCF33583.1| transcription termination factor 2 [Colletotrichum higginsianum]
          Length = 364

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 5/147 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            KVIIFSQ+   + +I+ QL  AG KF  +   M +  +  ++    HD     +L     
Sbjct: 212  KVIIFSQWTSFLTIIQNQLIEAGYKFVRVDGSMTAPKRDAAIHALDHDPDTRVMLASLAV 271

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S+GL+L     V L +  W  ++E+Q I R HR+G  RP  V  L M GTVEE++L+  
Sbjct: 272  CSVGLNLVSADTVILADSWWAPAIEDQAIDRVHRLGQKRPTTVWRLVMEGTVEERVLDIQ 331

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHRT 1138
             +    +R L  +  + + +G ++  T
Sbjct: 332  HE----KRTLVGKAFQEKNKGKKTQET 354


>gi|239608047|gb|EEQ85034.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis
            ER-3]
          Length = 1150

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 2/128 (1%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P+K IIFSQF   + +++  +   G  +      M  S + +++  F        +L+  
Sbjct: 992  PEKTIIFSQFTTLLDLLQVPIEREGWGYCRYDGSMQPSERNEAVLEFSDSKDRTIMLISL 1051

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             + + GL+L+  ++V +++P W+  +EEQ I RAHR+G  RP+ V  + ++GTVE+++LE
Sbjct: 1052 KAGNSGLNLTVASQVIILDPFWNPYIEEQAIDRAHRIGQLRPVMVHRIFVKGTVEDRILE 1111

Query: 1110 FLQDTDRC 1117
             LQD  R 
Sbjct: 1112 -LQDRKRA 1118



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 42/240 (17%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           + TLIV P  L+  WK +I++ ++P  QL +F+  + +    ++L   YDVV+TT+  L+
Sbjct: 521 KTTLIVAPVALIQQWKREIERMLKPTHQLTVFILHNERGVKYNNLK-KYDVVLTTYGTLA 579

Query: 673 AEWGRRKKSPMMQVH------------------------WLRVMLDEGHTLGSSLNLTNK 708
           +E  R + +  M+                          W RV++DE   + +    T  
Sbjct: 580 SELKRLEVARRMRTENEHTYRNIDPDEKFSLPLLGERSTWYRVIIDEAQCIRN--KATKA 637

Query: 709 LQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQK-AWDGGILR--- 764
            Q    L ++ RW +TGTP  N     +S +  ++KFL    Y   +K  +   +L+   
Sbjct: 638 AQACYRLKSTYRWCMTGTPMMNN----VSEIYSLIKFLRIGPYNVLEKFNYTFSVLQRVN 693

Query: 765 --PFEAEMEEGRSRLLQLLHRCMISAR---KTDLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
             P    M++ ++ L  +L R   S+    K  LQ +P    E T+  F+E+    Y+ L
Sbjct: 694 IPPGFPPMKKFQALLKAILLRRTKSSEIDGKRILQ-LPPRTTEKTYATFSEDEESLYDAL 752


>gi|47221257|emb|CAG13193.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1704

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 126/289 (43%), Gaps = 64/289 (22%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP---SAHSLAWDYDVVITTFNRL 671
           ATLI+ PS +   W  +I +H+R   L + V+   KK      H LA + DVVITT++ L
Sbjct: 677 ATLIISPSSICHQWVEEINRHIRSSSLRVLVYQGVKKHGFIQPHMLA-EQDVVITTYDVL 735

Query: 672 SAEW------------GRRKK---------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQ 710
            +E             GRR +         SP++ V W R+ LDE   +          +
Sbjct: 736 RSELNYVDIPHSNSKDGRRFRNQKRYMAVPSPLVAVEWWRICLDEAQMVECP--TAKAAE 793

Query: 711 MAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF-EAE 769
           MA+ L + NRW ++GTP        L  L  ++ FL  + Y      WD  + RP+    
Sbjct: 794 MALRLASVNRWCVSGTPV----QRGLEDLYGLVLFLGVDPYWVKH-WWDQLLYRPYRRGN 848

Query: 770 MEEGRSRLLQLLHRCMISARK--TDLQTIPLCIKEVTFLNFT--------EEHAGTYNEL 819
            E     + QLL R   SA+K   D   IP   +EV +LNF+         +H     + 
Sbjct: 849 TEPLYFVIAQLLWR---SAKKDVIDQIQIPPQTEEVHWLNFSPVEGHFYHRQHEVCSQDA 905

Query: 820 VVTVRRNILMADWN------DPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
           +V +R+   ++DW+      D   V ++L P         +  LR +CC
Sbjct: 906 LVKLRK---ISDWSLKLGSLDRRTVNTILCP---------LLRLRQACC 942



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 167 LFPHQQAAVEWMLHREWN-----AEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTM 221
           L P+Q  AV WML RE +      E   H L+ +L T  G   + N  +G +        
Sbjct: 279 LRPYQSQAVNWMLRREKSRNTSPKEQTLHFLWRELITLCGKKLFYNPFTGCLIREFPLVG 338

Query: 222 RDFHGGMFCDEPGLGKTITALSLIL 246
            ++ GG+  DE GLGKT+  LSLIL
Sbjct: 339 AEWPGGILADEMGLGKTVEVLSLIL 363


>gi|342888169|gb|EGU87535.1| hypothetical protein FOXB_01917 [Fusarium oxysporum Fo5176]
          Length = 1645

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +IE  LT A IKF  +   M    +   L+ F        LL+   A
Sbjct: 1007 KSVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNEFTERKGFTILLLSLRA 1066

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RVF+M+P W  ++E Q I R HRMG    + V+   ++ +VEE+ML+
Sbjct: 1067 GGVGLNLTSAGRVFMMDPWWSFAVEAQAIDRVHRMGQESEVQVKRFVVKESVEERMLK 1124



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK---------PSAHSLAWD-----Y 661
           TL+V P  L+  W+++  +  + G + + ++  ++K          S  S A D     Y
Sbjct: 576 TLVVAPMSLLSQWQSEAVKASKDGTMKIELYYGNEKSSNLQALCCASNASNAPDLVITSY 635

Query: 662 DVVITTFNRLSAEWGRRK-KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            VV++ F+ ++A  G +   + +  + + R+++DE H + +  + T K    IS  A +R
Sbjct: 636 GVVLSEFSSIAARNGDKSFHNGLFSLKFFRIIIDEAHHIKNRSSKTAKACYEIS--AYHR 693

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE+        ++Q 
Sbjct: 694 WALTGTPIVN----KLEDLFSLVRFLGVEPWN-NFSFWRTFITVPFESGDFMRALDVVQT 748

Query: 781 LHRCMISARKTDLQT--------IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R  D++T        +P    E+  +  +E     Y+ +    +R       
Sbjct: 749 VLEPLVLRRTKDMKTPDGKPLVLLPPKQVEIVDVELSETERDVYSYIFNKAKRTF----- 803

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
               +VE+    K +      I  LR SCC
Sbjct: 804 --SQNVEAGTVMKAFTTIFAQILRLRQSCC 831



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 17/98 (17%)

Query: 165 LKLFPHQQAAVEWMLHREW----NAEVLRHPLY-------------IDLATEDGFYFYVN 207
           + L  +Q+ A+ WM+ +E     N E   HPL+             I    E    FYVN
Sbjct: 438 MTLRSYQKQALHWMMAKEKDEKSNREPSMHPLWEEYDWPLKDVDDKIVPQVEGQPKFYVN 497

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             SGD++       +   GG+  DE GLGKTI  LSL+
Sbjct: 498 PYSGDLSLDFPVQEQHCLGGILADEMGLGKTIQMLSLV 535


>gi|148702946|gb|EDL34893.1| mCG123397, isoform CRA_d [Mus musculus]
          Length = 628

 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 5/115 (4%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAW--DYDVVITTFNR 670
           +RATLI+ P  ++ +W  Q  QHV+  ++HL  +  +        AW    D+++TT+N 
Sbjct: 469 TRATLIICPLSVLSNWIDQFGQHVK-SEVHLNFYVYYGPDRIRDSAWLSKQDIILTTYNI 527

Query: 671 LSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTG 725
           L+ ++G +  SP+  + WLRV+LDEGH + +      + +  + L A  RW+LTG
Sbjct: 528 LTHDYGTKDDSPLHSIKWLRVILDEGHAIRNP--NAQQTKAVLELEAERRWVLTG 580



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 10/94 (10%)

Query: 153 RCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGD 212
           R +       ++  L PHQ+ A+ WM+ RE + E+   P + +   +     Y NT++ +
Sbjct: 226 RTVEMEPAEAIETPLLPHQKQALAWMIARENSKEL---PPFWEQRND----LYYNTIT-N 277

Query: 213 IATGTAPTMRDFHGGMFCDEPGLGKTITALSLIL 246
            +    P   + HGG+  D+ GLGKT+TA+++IL
Sbjct: 278 FSVKERP--ENVHGGILADDMGLGKTLTAIAVIL 309


>gi|327356510|gb|EGE85367.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis
            ATCC 18188]
          Length = 1150

 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 2/128 (1%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P+K IIFSQF   + +++  +   G  +      M  S + +++  F        +L+  
Sbjct: 992  PEKTIIFSQFTTLLDLLQVPIEREGWGYCRYDGSMQPSERNEAVLEFSDSKDRTIMLISL 1051

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             + + GL+L+  ++V +++P W+  +EEQ I RAHR+G  RP+ V  + ++GTVE+++LE
Sbjct: 1052 KAGNSGLNLTVASQVIILDPFWNPYIEEQAIDRAHRIGQLRPVMVHRIFVKGTVEDRILE 1111

Query: 1110 FLQDTDRC 1117
             LQD  R 
Sbjct: 1112 -LQDRKRA 1118



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 42/240 (17%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           + TLIV P  L+  WK +I++ ++P  QL +F+  + +    ++L   YDVV+TT+  L+
Sbjct: 521 KTTLIVAPVALIQQWKREIERMLKPTHQLTVFILHNERGVKYNNLK-KYDVVLTTYGTLA 579

Query: 673 AEWGRRKKSPMMQVH------------------------WLRVMLDEGHTLGSSLNLTNK 708
           +E  R + +  M+                          W RV++DE   + +    T  
Sbjct: 580 SELKRLEVARRMRTENEHTYRNIDPDEKFSLPLLGERSTWYRVIIDEAQCIRN--KATKA 637

Query: 709 LQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQK-AWDGGILR--- 764
            Q    L ++ RW +TGTP  N     +S +  ++KFL    Y   +K  +   +L+   
Sbjct: 638 AQACYRLKSTYRWCMTGTPMMNN----VSEIYSLIKFLRIGPYNVLEKFNYTFSVLQRVN 693

Query: 765 --PFEAEMEEGRSRLLQLLHRCMISAR---KTDLQTIPLCIKEVTFLNFTEEHAGTYNEL 819
             P    M++ ++ L  +L R   S+    K  LQ +P    E T+  F+E+    Y+ L
Sbjct: 694 IPPGFPPMKKFQALLKAILLRRTKSSEIDGKRILQ-LPPRTTEKTYATFSEDEESLYDAL 752


>gi|328856775|gb|EGG05895.1| hypothetical protein MELLADRAFT_87660 [Melampsora larici-populina
            98AG31]
          Length = 1354

 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ+ + +  I   L    I +  +   M    + K+++  + D  C  LL+   +
Sbjct: 1172 KSVVFSQWTKMLDRIGDALDEFNIGYGRLDGTMSRPERNKAMEDLKTDPKCEVLLVSLRA 1231

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+   RV+LMEP W+ ++E Q + R HR+G T+P+ +    + G+VE+ MLE 
Sbjct: 1232 GGVGLNLTCAQRVYLMEPFWNPAVENQAVDRVHRLGQTKPVRMIRYIIAGSVEQNMLEI 1290



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 110/283 (38%), Gaps = 75/283 (26%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVR--PGQ---------LHLFVWTDHKKPSAHSLAWDY 661
           SRATLI+ P   V +W++QI++HVR  P +         L + V+  + + +   +  D+
Sbjct: 607 SRATLIICPLSTVQNWESQIEEHVRKIPSKTLKNSTQAGLSVCVYHGNSRTTDVKVLADH 666

Query: 662 DVVITTFNRLSAEWGRRKK----------------------------------------- 680
           DVVITT++ L  E+ R+ +                                         
Sbjct: 667 DVVITTYSLLGYEYSRQNRKEEEGAAQDSSDGGIEELDGSGNSLTATESNENSKRKRPLK 726

Query: 681 ---------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
                    SP+  + W RV+LDE H +     + ++   A  L A  R  LTGTP  N+
Sbjct: 727 RKRKGDGLPSPLQSIEWFRVVLDEAHMIKEHSTIQSR--AACDLLAERRVCLTGTPLQNS 784

Query: 732 PNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
            N   S    ++ FL  E +  ++  W   I  P +   + G SRL  ++ +  +   K 
Sbjct: 785 LNDLFS----LVAFLRLEPF-TDRVFWTTHIGTPAKLGDKLGVSRLKLIMRQIALRRTKN 839

Query: 792 DLQ-------TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI 827
            +        ++P     + +L   E     Y+      R+N 
Sbjct: 840 SIDKNGKPILSLPTKRDTIVYLELDEYEKKFYSTYHQRSRKNF 882


>gi|255552483|ref|XP_002517285.1| helicase, putative [Ricinus communis]
 gi|223543548|gb|EEF45078.1| helicase, putative [Ricinus communis]
          Length = 363

 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 82/152 (53%), Gaps = 9/152 (5%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNK---IKSLDMFRHDASCLALLMD 1049
            K +IFSQF + + ++E+ L  AG K   +   M++  K   IK   +   +   + L   
Sbjct: 210  KSVIFSQFQKMLVLLEEPLKAAGFKILRLDGTMNAKKKAQVIKEFGIPGPNGPTVLLASL 269

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             ++  G++L+  ++V+L+EP W+ ++EEQ + R HR+G    + V  L  R ++EE++LE
Sbjct: 270  KASCAGINLAAASKVYLLEPWWNPAVEEQAMDRVHRIGQKEDVTVVRLITRNSIEERILE 329

Query: 1110 FLQDTDRCRRLLKEELVKPEREGARSHRTLHD 1141
                 +R ++L KE      R GA++H    D
Sbjct: 330  M---QERKKKLAKEAF---GRRGAKAHDVRTD 355


>gi|195144322|ref|XP_002013145.1| GL23967 [Drosophila persimilis]
 gi|194102088|gb|EDW24131.1| GL23967 [Drosophila persimilis]
          Length = 1060

 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 121/551 (21%), Positives = 218/551 (39%), Gaps = 90/551 (16%)

Query: 615  ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
             TL+V P+ L+  W+ +++  V   +L + V   + + +       YD+V+TT+N +  E
Sbjct: 517  GTLVVCPASLLRQWEAEVESKVNRHRLTVCVHHGNNRETKAKHLRTYDIVVTTYNIVGRE 576

Query: 675  WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS-LTASNRWLLTGTPTPNTPN 733
               ++ S +  V W R++LDE H + +   L +   +A+S L    RW LTGTP  N   
Sbjct: 577  --HKESSALFGVKWRRIILDEAHVVRNHKALAS---IAVSDLRGKFRWALTGTPIQN--- 628

Query: 734  SQLSHLQPMLKFLHEEAYG--QNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT 791
             +   +  +LKFL    +      K W        + +   G++RL  L+   M+   K 
Sbjct: 629  -KELDIYALLKFLRCSPFDDLNTWKKW-------IDNKSAGGQNRLNLLMKSIMLRRTKA 680

Query: 792  DLQ------TIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNI----------------LM 829
             LQ      ++P     +  ++  ++    Y + V+T  R +                 +
Sbjct: 681  QLQQEGKLNSLPGKDLRMIEISLDKDEMNVY-QTVMTYSRTLFAQFLFQRAEKDSDSNFI 739

Query: 830  ADWNDPSH-----------------VESLLNPKQWKFRSTTIRNLRLS--CCVAGHIKVT 870
            +D N P++                  +   N K+ K     +  LRL   CC  G I   
Sbjct: 740  SDANKPTYNQIKDPNGAYYKLHEKFAKMAGNKKEVKSHEILVLLLRLRQICCHPGLIDSM 799

Query: 871  DAGEDIQETMDVLVENG----LDPLSQEYAF-IKYNLLNGGNCLRHILCLDCVAMDSEKC 925
              GE+ + +MD    +G    +D L+Q     I     +     R       V  D +  
Sbjct: 800  LEGEEAK-SMDADGSDGESPEIDLLAQLNKLAITDTSTSPRRSSRDSGSSRGVTEDDDGP 858

Query: 926  SLPGCGFLYEMQSPEILTRPENP--NPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPN 983
             L G        S  +L R  NP  N K P  + L  ++            LK  + + N
Sbjct: 859  PLHGDEARIAKASKNVLKRS-NPVFNMKRPSTKMLKVME-----------ILKSSILKDN 906

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF--RHDA 1041
                    DK II SQ+   + ++   L    +    +   +   N+ + ++ F  +H+ 
Sbjct: 907  -------NDKAIIVSQWTSVLEILRDHLENDKLSTLSLNGSIPVKNRQEIVNQFNDQHNQ 959

Query: 1042 SCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRG 1101
              + LL   +  +GL+L     + L++  W+  +E Q   R +R+G  + + +       
Sbjct: 960  KRILLLSLTAGGVGLNLVGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKDVMIYKFVCLD 1019

Query: 1102 TVEEQMLEFLQ 1112
            TVE+++L   Q
Sbjct: 1020 TVEQRILALQQ 1030


>gi|358375868|dbj|GAA92443.1| helicase [Aspergillus kawachii IFO 4308]
          Length = 899

 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 9/151 (5%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K I+FS + + + ++ + L    I FA +   M  S + ++   F+  +    LLM  G
Sbjct: 756  EKGIVFSAWTKSLDIMAELLRHHDIAFARVDGSMSFSQRQQAFQSFKTSSDVNILLMTIG 815

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + ++GL+LS  TRV +MEP W+  +E+Q I R  R+G  RP+ +    MR TVEE ++  
Sbjct: 816  TGAVGLNLSIATRVHIMEPSWNPMVEQQAIGRVVRLGQKRPVVITRYIMRDTVEESVV-- 873

Query: 1111 LQDTDRCRRLLKEELVKPEREGARSHRTLHD 1141
                   R+ LK ++     EGA      HD
Sbjct: 874  ------SRQDLKLDVAMGGFEGASCEAAGHD 898



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 8/135 (5%)

Query: 613 SRATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           ++ATLIVVP+  L++ W  +I+    PG      +    + ++     ++D+V+TT+  +
Sbjct: 410 AKATLIVVPNEALMEQWLDEIRSKFIPGTFDHCKYHGSSRKASIRTFEEFDIVLTTYGTI 469

Query: 672 SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
           S E+  R+ SP+ Q  + R++LDE H + S    T   + A +++A  RW LTGTP  N 
Sbjct: 470 STEFAERE-SPIYQTDFFRIVLDEAHNIKS--RSTRIHEAACNISADRRWCLTGTPIQN- 525

Query: 732 PNSQLSHLQPMLKFL 746
               L  L  ++ FL
Sbjct: 526 ---DLDDLGALVSFL 537



 Score = 50.1 bits (118), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 163 MKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIAT--GTAPT 220
           + + LFPHQ+ A+++M+ RE         L+     ++G   + + ++GD  T     P 
Sbjct: 306 LNISLFPHQKEAIDFMIRRETGRSTSSISLWNIQKDKNGNPHHYHAITGDSTTELSVGPL 365

Query: 221 MRDFHGGMFCDEPGLGKTITALSLILKT 248
                GG+  D  GLGKT+T LS IL T
Sbjct: 366 -----GGILADTMGLGKTVTTLSTILST 388


>gi|440792271|gb|ELR13499.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 1212

 Score = 76.6 bits (187), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 18/150 (12%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHL--FVWTDHKKPSAHSLAWDYDVVIT 666
           R  +   TL++ P   +  W  +I    + G L +  F   + +  +A SLA DYD+V+T
Sbjct: 446 RKRVQGGTLVLCPLSTLSQWHQEISDKSQEGALRVAEFYGANRQSFTAASLA-DYDIVLT 504

Query: 667 TFNRLSAEWG---------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTA 717
           T+  ++  W          RR+  P+ Q+ W RV+LDEGH + +    T   + A +L +
Sbjct: 505 TYGTMARGWSSEDDARAFVRRRLGPLHQMTWFRVVLDEGHIIRN--ESTQAAKAAYALKS 562

Query: 718 SNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
             RW+++GTP  N+    L  +  +L+FLH
Sbjct: 563 KYRWIMSGTPIQNS----LDDMYSLLRFLH 588



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 9/146 (6%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K +++SQF  ++ ++   L   G  F  +   M  + + +S++ F+ D      L+   +
Sbjct: 1034 KSLVYSQFTRYLDMVGHILRWKGFTFVRLDGRMSKAKRQRSMERFKDDPEVTIFLISLKA 1093

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
               GL+L+  +R++L++P W+ + E+Q I RAHR+G   P+ V    +  ++EE++LE  
Sbjct: 1094 GGFGLNLTSASRIYLLDPWWNPATEQQAIDRAHRLGQKLPVVVTRFIIINSIEERILELQ 1153

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHR 1137
            +         K EL +   EG   +R
Sbjct: 1154 KK--------KNELARGAFEGGSPNR 1171


>gi|347839486|emb|CCD54058.1| similar to DNA repair protein rad5 [Botryotinia fuckeliana]
          Length = 1153

 Score = 76.6 bits (187), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 6/164 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +IE  L  + I F  +   M    +   L  ++     + LL+   A
Sbjct: 992  KSVVFSQFTSFLSLIEPALARSSIPFLRLDGSMPQKARAAVLARYKDSGEGIVLLLSLRA 1051

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              +GL+L+   RVF+M+P W  ++E Q I R HRMG    + V+   ++G+VEE+ML   
Sbjct: 1052 GGVGLNLTMAKRVFMMDPWWSFAVEAQAIDRVHRMGQVGEVVVKRFIVKGSVEERMLRVQ 1111

Query: 1112 QDTDRCRRLLKEELVKPEREGARSHRTLHDFAESNYLSHLSFVR 1155
            +     ++ +   L     E  +  R + D  E ++L++  F R
Sbjct: 1112 ER----KKFIASSLGMMSDEEKKLQR-IEDIKEQSFLNNELFSR 1150



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--------------PSAHSLAWDY 661
           TL+V P  L+  W+++ +   R G +   V+    K               + + +   Y
Sbjct: 566 TLVVAPMSLLAQWQSEAENASRDGTMKSIVYYGSDKTTNLQALCCEANAASAPNVVITSY 625

Query: 662 DVVITTFNRLSAEWGRRK-KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            V+++ FN+++A  G +     +  + + RV+LDE H + +  + T K    I+  A +R
Sbjct: 626 GVILSEFNQVTARNGDKGGHGGLFSLSFFRVILDEAHYIKNRQSKTAKACYEIA--AEHR 683

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE++       ++Q 
Sbjct: 684 WALTGTPIVN----RLEDLFSLVRFLRVEPWS-NFSFWKTFITIPFESKDFMRALDVVQT 738

Query: 781 LHRCMISARKTDLQT------IPLCIK--EVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R  D++T      +PL  K  ++  +  +E     Y+ +    +R       
Sbjct: 739 VLEPLVLRRTKDMKTPNGEALVPLPKKTIDIVEIELSEPEREVYDHIFTRAKRTF----- 793

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
              +++E+    K +      I  LR SCC
Sbjct: 794 --SANIEAGTVLKAYTSIFAQILRLRQSCC 821



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 22/146 (15%)

Query: 165 LKLFPHQQAAVEWMLHREWN-----AEVLRHPLY---------------IDLATEDGFYF 204
           + L P+Q+ A+ WM+ +E +      E   HPL+               I +A +D FY 
Sbjct: 427 MDLRPYQKQALYWMMAKERDEKDHKKEASMHPLWEEYAWPLKDMDDKEVIQIADQDKFY- 485

Query: 205 YVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWC 264
            +N  SG ++       +   GG+  DE GLGKTI  +SLI  ++  +A   D  +    
Sbjct: 486 -INPYSGALSLDFPLQEQHCLGGILADEMGLGKTIEMMSLIHSSKSDVAMRLDEKRSKAT 544

Query: 265 THNGDPRCGYYDLSGDKLTCNNMCLG 290
           + N  PR      S ++  C  + + 
Sbjct: 545 SVNNLPRLPASSSSVERAPCTTLVVA 570


>gi|145347826|ref|XP_001418362.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578591|gb|ABO96655.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1432

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 118/276 (42%), Gaps = 53/276 (19%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP-----------SAHSLAWDYDV 663
           ATL+V PS ++  W+ + +QHVRPG L +  +    K            SA  LA D D+
Sbjct: 347 ATLVVCPSAIIKQWRDECKQHVRPGTLKIITYEGQSKRSGAGGSMKGVFSAKELA-DADI 405

Query: 664 VITTFNRL---------------SAEWGRRKK-------SPMMQVHWLRVMLDEGHTLGS 701
           V+TT++ L                AE  RR +       +P+ ++ W RV+LDE   + S
Sbjct: 406 VLTTYDTLRTEIDIDTANGHGLAGAERARRYEKKYEVVPTPLTRLKWWRVVLDEAQMVES 465

Query: 702 SLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
           +  ++   +M   L   +RW +TGTP     +  L  +  +L FL    +      W   
Sbjct: 466 T--VSKAAEMVRRLPTVHRWAVTGTPI----SRGLGDIFGLLTFLMVSPFQHGDFWWRRM 519

Query: 762 ILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQT---IPLCIKEVTFLN--------FTE 810
           I  P+ +     R  L ++L   M    + D++    IP   +  T+L         ++ 
Sbjct: 520 IEIPYMSGDVSARELLHKILKGLMWRNSRADMERQLGIPPQGEVATWLRSSAVEQHWYSR 579

Query: 811 EHAGTYNELVVTVRRNILMADWND--PSHVESLLNP 844
           ++A    +   T+RR I  AD     P+   S++ P
Sbjct: 580 QYANCAADANATLRRFIRHADSESLPPNKASSVMGP 615



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFA-GMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            K+I+FS++ + + V+E+ +    I+F  G+  P         +D F+HDA+C  LL+   
Sbjct: 1251 KMIVFSEWDDVLDVVEKAMRANEIRFVRGVSGPKFRD----VIDTFKHDAACNVLLLPLK 1306

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              + GL+L+    V L+EP+ D  ME Q I R  R+G TRP  V    +R T+EE +  F
Sbjct: 1307 RGAHGLNLTEAQHVLLLEPVLDPGMEAQAIKRVDRIGQTRPTCVHRFFIRDTIEENVHNF 1366


>gi|445493787|ref|ZP_21460831.1| SNF2-like protein [Janthinobacterium sp. HH01]
 gi|444789948|gb|ELX11495.1| SNF2-like protein [Janthinobacterium sp. HH01]
          Length = 1387

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 80/153 (52%), Gaps = 11/153 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            KV++FSQF++H+ +I + L    I +  +      + + K +D+F+     + L+   + 
Sbjct: 1234 KVLVFSQFVDHLSLIREHLDANNISYQYLDGSTPMAERKKRVDLFQAGEGDVFLISLKAG 1293

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE--- 1109
             +G++L+    V  M+P W+ ++E+Q   RAHRMG  RP+ +  L  R T+EE +++   
Sbjct: 1294 GVGINLTAADYVIHMDPWWNPAVEDQASDRAHRMGQLRPVTIYRLVARHTIEEGIVDLHQ 1353

Query: 1110 --------FLQDTDRCRRLLKEELVKPEREGAR 1134
                     L+ +D   R+   E++   +EG R
Sbjct: 1354 HKRDLADSLLEGSDVSGRMSASEMLNMLQEGMR 1386


>gi|403172771|ref|XP_003331917.2| adenosinetriphosphatase [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|375169990|gb|EFP87498.2| adenosinetriphosphatase [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1044

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 12/208 (5%)

Query: 910  RHILCLDCVAMDSEKCS-----LPGCGFLYEMQSPEILTRPENPNPKWPVPQDLIE-LQP 963
            RHI C +C+    E  +      P C     +   +     EN   K    Q +++ L P
Sbjct: 809  RHIFCRECIRQYLETATEQEPECPVCHLPITIDLSQDALEDENMGSK--ARQGVLDRLDP 866

Query: 964  SYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYS 1023
               + S     L ++L + N +S+  +  K I+FSQF   + +IE++L +AG K A +  
Sbjct: 867  GKWRTSTKIEALVEELSKLN-QSDHTI--KSIVFSQFTVFLDLIERRLQLAGFKLARLQG 923

Query: 1024 PMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISR 1082
             M    + +++  F ++      L+   +  + L+L+  +RVF+M+P W+ ++E Q + R
Sbjct: 924  NMTPEARNRTIQYFMNNNDVQVFLVSLKAGGVALNLTEASRVFIMDPWWNPAVELQAMDR 983

Query: 1083 AHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             HR+G  RP+ V  L +  ++E +++E 
Sbjct: 984  IHRLGQHRPVVVTRLIIENSIESRIVEL 1011



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 27/176 (15%)

Query: 596 ALRLALCEPLDSVRLYLS-------RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTD 648
           A  + + + + ++ L LS       + TL++ P+  +  W+ +I++  +   L + VW  
Sbjct: 445 ADEMGMGKTIQTIALILSDRVPGHRKQTLVIAPTVAIMQWRNEIEKFAK--GLTVNVWHG 502

Query: 649 HKKPSAHSLAWDYDVVITTFNRLSAEWGR------------RKKSPMMQVHWLRVMLDEG 696
             + +A     ++DVV+T+F  L + + R            ++ S + Q++W RV+LDE 
Sbjct: 503 GNRSNAQEEMENFDVVLTSFAVLESAFRRQNSGFRRKGQIIKESSLLHQINWHRVILDEA 562

Query: 697 HTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYG 752
           H +       N  + A  L A+ RW L+GTP  N    ++  L  +++FL  + + 
Sbjct: 563 HNIKD--RSCNTAKGAFELKATYRWCLSGTPLQN----RVGELYSLIRFLGADPFS 612


>gi|47459148|ref|YP_016010.1| SWF/SNF family helicase [Mycoplasma mobile 163K]
 gi|47458477|gb|AAT27799.1| swf/snf family helicase-like protein [Mycoplasma mobile 163K]
          Length = 958

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 1/127 (0%)

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASC 1043
            ++S K L  KV+IF+QF ++I   E+    + IK+  +    +   + K  + F   +  
Sbjct: 800  IKSIKLLKQKVLIFTQFTKNIPFFEKNFIKSNIKYDIISGKTNKKERFKITEYFNESSDI 859

Query: 1044 LALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGT 1102
              L++   A SLGL+L+    V L +  W++S+E Q I R HR+G  R ++V  L M+ T
Sbjct: 860  DVLIISLRAGSLGLNLTSANNVILYDIWWNQSVESQAIDRVHRIGQKRGVNVFKLIMKDT 919

Query: 1103 VEEQMLE 1109
            +EE++ E
Sbjct: 920  IEEKVFE 926


>gi|361131030|gb|EHL02760.1| putative DNA repair protein rad-5 [Glarea lozoyensis 74030]
          Length = 1177

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 2/122 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +IE  LT A I F  +   M    +   L  F      + LL+   A
Sbjct: 1003 KTVVFSQFTSFLSLIEPALTRAAIPFLRLDGTMAQKARTAVLKDFSASKKGVVLLLSLRA 1062

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              +GL+L+   RV++M+P W  ++E Q I R HRMG T  + V    ++ ++EE+ML+ +
Sbjct: 1063 GGVGLNLTMAKRVYMMDPWWSFAVEAQAIDRVHRMGQTDEVLVSRFIVKDSIEEKMLK-I 1121

Query: 1112 QD 1113
            QD
Sbjct: 1122 QD 1123



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 122/270 (45%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--------------PSAHSLAWDY 661
           TL+V P  L+  W+++ +   + G L   V+  ++K               + + +   Y
Sbjct: 581 TLVVAPMSLLAQWQSEAENASKDGTLKSMVYYGNEKNADLQALCCEKNAASAPNVIITSY 640

Query: 662 DVVITTFNRLSAEWGRRKK-SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            V+++ FN+++A  G R     +  + + RV+LDE H + +  + T +      + A +R
Sbjct: 641 GVILSEFNKVAANGGNRAAHGGLFSLKYFRVILDEAHHIKNRQSKTAR--ACYEIDAEHR 698

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W+LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE++       ++Q 
Sbjct: 699 WVLTGTPIVN----RLEDLFSLVRFLRVEPWS-NFSFWKTFITVPFESKDFMRALDVVQT 753

Query: 781 LHRCMISARKTDLQT------IPLCIKEVTFLN--FTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R  D++T      +PL +K +  ++   ++     Y+ +    +RN+     
Sbjct: 754 VLEPLVLRRTKDMKTPAGEALVPLPLKTINIVDIELSQPEREVYDHIFTRAKRNL----- 808

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
              +++E+    K +      I  LR SCC
Sbjct: 809 --AANMEAGTVMKAYTSIFAQILRLRQSCC 836



 Score = 43.5 bits (101), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 18/108 (16%)

Query: 156 AASIMPCMKLKLFPHQQAAVEWMLHREWNA-----EVLRHPLYIDLA------------- 197
           AA       + L  +Q+ A+ WM+ +E +      EV  HPL+ + A             
Sbjct: 433 AAEPAATFAMDLRQYQKQALHWMMSKEKDEKNSDREVSMHPLWEEYAWPIRDMDDKDLPG 492

Query: 198 TEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
                  YVN  SG+++       ++  GG+  DE GLGKTI  +SLI
Sbjct: 493 VRGQDSLYVNPYSGELSLRFPVQEQNCLGGILADEMGLGKTIEMMSLI 540


>gi|167535991|ref|XP_001749668.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771816|gb|EDQ85477.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1317

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 1/116 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            KV++FSQF   + ++ ++L    +KFA +   M  + +  +L  F  D S    L+   A
Sbjct: 1106 KVLVFSQFSNTLTMVGERLKRRHLKFATLVGSMERTQRTNALAGFAKDPSTNVFLLSTRA 1165

Query: 1053 -SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
             ++G++L+    V LM+P  + + E+Q I R HR+G TRP+HV  L MR +++ ++
Sbjct: 1166 GAVGINLTEANHVVLMDPCVNPATEQQAIGRVHRLGQTRPVHVHRLLMRHSIDTRI 1221



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 23/207 (11%)

Query: 625 VDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMM 684
           V+ W  +++QH+   ++H+F  T   K +A+ L  ++D+VITT + +  E  +  K  + 
Sbjct: 723 VEIWAEEVKQHLPHLKVHIFHGTKRIK-NANKLK-EFDIVITTPHLVGQE--KPDKLILR 778

Query: 685 QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLK 744
            + W R++LDE H + S+     K+Q   +L A NRW LTGTP        L  L P   
Sbjct: 779 SIRWHRIVLDESHLISSASRQGRKIQ---ALAARNRWCLTGTP---VQRRVLPDLAPQFS 832

Query: 745 FLH---EEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ-LLHRCMI------SARKTDLQ 794
           FL    +  YG    A   G+L  F          L+Q +L R M+      +     + 
Sbjct: 833 FLRVPFDPNYGARMSA---GLLFGFGPRFRSHCDNLIQPVLLRVMVRHTLNQALEGQPIL 889

Query: 795 TIPLCIKEVTFLNFTEEHAGTYNELVV 821
            +P        ++F+      Y++L  
Sbjct: 890 ELPPISAHTVMVDFSPAERAAYDQLAA 916


>gi|417406028|gb|JAA49696.1| Putative transcription termination factor 2 [Desmodus rotundus]
          Length = 1167

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 29/155 (18%)

Query: 611 YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           ++SR TLIV P+ L+ HWK ++++ V   +L + ++    +     +   YD+VITT++ 
Sbjct: 644 FISRGTLIVCPASLIHHWKKEVEKRVSNNKLRVCLYHGPNRDQRAKVLSTYDIVITTYSL 703

Query: 671 LSAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS 714
           L+ E   +K+               +P+++V W RV+LDE H      N+ N ++Q +I+
Sbjct: 704 LAKEIPTKKQEGDVPGTNLSAEGVSTPLLRVVWARVVLDEAH------NVKNPRVQTSIA 757

Query: 715 ---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
              L A  RW +TGTP  N     L  +  +LKFL
Sbjct: 758 VCKLQARARWAVTGTPIQNN----LLDMYSLLKFL 788



 Score = 53.9 bits (128), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 6/127 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFA---GMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            K +I SQ+   + VI   L    + +A   G  SP    + +++ +  R     L  L+ 
Sbjct: 1016 KSVIVSQWTGMLKVIASHLKRHRLTYATIDGSVSPKQRMDLVEAFNNSRGPQVMLISLLA 1075

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
            G   +GL+L+    +FL++  W+ S+E+Q   R +R+G  + + +      GTVEE++L+
Sbjct: 1076 GG--VGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHKFVCEGTVEEKILQ 1133

Query: 1110 FLQDTDR 1116
             LQ+T +
Sbjct: 1134 -LQETKK 1139


>gi|401425078|ref|XP_003877024.1| DNA repair protein-like protein [Leishmania mexicana
            MHOM/GT/2001/U1103]
 gi|322493268|emb|CBZ28553.1| DNA repair protein-like protein [Leishmania mexicana
            MHOM/GT/2001/U1103]
          Length = 909

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 16/177 (9%)

Query: 943  TRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDLYRPNLESNKALP--DKVIIFSQF 1000
            T    P P+  +  DL ++     Q S+   +L        +++ ++LP  DKV++FS F
Sbjct: 681  TSAAGPAPEVLLHLDLTDMNNWSLQLSSKTQYL--------IDTIRSLPVEDKVVVFSTF 732

Query: 1001 LEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASC-----LALLMDGSASLG 1055
            L ++   +  L  AG+  A +YS   +  + +SL    HDA+      + L    S  +G
Sbjct: 733  LTYLRCAQHWLQAAGVSCA-LYSGSMTMKQRQSLLELFHDAARPGSPRVLLATISSCGVG 791

Query: 1056 LDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
            L+L+     FLMEP W+   EEQ ++R +R+G T+P+    L   GT+E+ + +  +
Sbjct: 792  LNLTCANHCFLMEPSWNPGTEEQALNRIYRIGQTKPVTFTKLIAEGTIEQNISQLCE 848



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 59/220 (26%)

Query: 599 LALCEPLDSVR-------LYLSRATLIVVPSYLVDHWKTQIQQHV-RPGQ--LHLFVWTD 648
           +ALCE   + R       L  S ATLIV P+ L+  W  +I   V RP    L + V+  
Sbjct: 193 IALCETTRAPRIDRVTGSLVESTATLIVCPTSLLTQWVREIHHCVQRPAAAPLRILVYYG 252

Query: 649 HKKP--SAHSLAWDYDVVITTFNRL------SAEWG------------------------ 676
            +K   S   +A  YD V+TT+  L      ++ +G                        
Sbjct: 253 ARKRHLSLFQVAQSYDYVLTTYQTLCQRQPPASRFGPTHVNRGATRSGGLSPEMAADFSD 312

Query: 677 -------RRKKS---PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGT 726
                  RR ++    +  + W R++LDE H + +    T++ +  + L+   RW++T T
Sbjct: 313 VDDFDVDRRLQTEVDKLFMIRWGRIILDEAHYIRNMR--THQSRACLKLSGVCRWVVTAT 370

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF 766
           P  N+    L+ L P+L+FL    +  +   W+  I+R F
Sbjct: 371 PVLNS----LNDLYPLLRFLTVPHFS-SLVWWNSEIVRYF 405


>gi|338529892|ref|YP_004663226.1| SNF2/helicase domain-containing protein [Myxococcus fulvus HW-1]
 gi|337255988|gb|AEI62148.1| SNF2/helicase domain-containing protein [Myxococcus fulvus HW-1]
          Length = 1181

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 64/118 (54%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            + ++FSQF  H+ ++ + L   GI +  +     +  + + +  F+     L L+   + 
Sbjct: 1017 RALVFSQFTSHLALVREVLDAEGIDYEYLDGQTPAGARAERVRAFQEGDVPLFLISLKAG 1076

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+  T V  ++P W+ ++E+Q   RAHR+G  RP+ V  L  RGT+EEQML  
Sbjct: 1077 GFGLNLTAATTVIHLDPWWNPAVEDQASDRAHRIGQERPVTVYRLVTRGTIEEQMLSL 1134


>gi|170114883|ref|XP_001888637.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636332|gb|EDR00628.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 163

 Score = 76.3 bits (186), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 2/130 (1%)

Query: 988  KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALL 1047
            +A  +K IIFS F+  + +I   L      F      + S+ +  +L     D  C  +L
Sbjct: 12   RARGEKTIIFSSFVSLLSLIGDALAERHTGFTSYTGALSSAQRQMALKRISQDTQCQVIL 71

Query: 1048 MDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQ 1106
            +   A   GL+++    V +M+P W+  +EEQ ISRAHR+G ++ +HV  +  R T+EE+
Sbjct: 72   ISIKAGGTGLNITACNHVIIMDPWWNPYVEEQAISRAHRIGQSKDVHVYRILARNTIEER 131

Query: 1107 MLEFLQDTDR 1116
            ++E +Q+  R
Sbjct: 132  IVE-IQNKKR 140


>gi|311113008|ref|YP_003984230.1| hypothetical protein HMPREF0733_11339 [Rothia dentocariosa ATCC
            17931]
 gi|310944502|gb|ADP40796.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931]
          Length = 1319

 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 2/118 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            +V++FSQF  ++  I ++L   GI +  +Y    + N+ + L  F   A+ + L+   + 
Sbjct: 1168 RVLVFSQFTGYLRTIAERLQAEGIDY--LYLDGTTRNRPQVLKDFAEGAAPVFLISLKAG 1225

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+     F+M+P W+ + E+Q + R HR+G  R +HV  L   GT+EE++++ 
Sbjct: 1226 GFGLNLTEADHCFIMDPWWNPAAEQQAVDRIHRLGQERDVHVYRLVAEGTIEEKVMDL 1283


>gi|425768492|gb|EKV07013.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Penicillium
           digitatum PHI26]
 gi|425775725|gb|EKV13978.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Penicillium
           digitatum Pd1]
          Length = 1180

 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 40/268 (14%)

Query: 590 LAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH 649
           L   + A+ L +  P +       R TLIV P  L+D W+ +IQ+H++PG+  L V   H
Sbjct: 517 LGKTIQAIALMVARPFEDED---RRPTLIVAPKALMDQWRLEIQRHIKPGRYQLSVLIYH 573

Query: 650 KKPSAHSLAWDYDVVITTFNRLSAEWG-------------------RRKKS--PMM-QVH 687
           ++         YDV+ITTF  ++A +                     RK +  P+     
Sbjct: 574 QRRRPWKELKKYDVIITTFGTITAHYKTLLEAEKLAEEGQHASLIQERKNAAGPLNPAAK 633

Query: 688 WLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           W RV++DE   +    N + K   A   L ++ RW LTGTP  N    +L   Q +L FL
Sbjct: 634 WHRVIIDEAQNIK---NPSAKSSTACCRLNSTYRWCLTGTPMMN----RLEDFQSLLGFL 686

Query: 747 HEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHR--CMISARKTDLQTIPLC----- 799
               Y    K     + R       E   + L++L +  C+   + + +   P+      
Sbjct: 687 RIRPYSNPSKFKADFVRRIKSGWGGEDVMKQLRVLVKSVCLRRTKSSKIDGEPILQLPPK 746

Query: 800 IKEVTFLNFTEEHAGTYNELVVTVRRNI 827
           + E   + F E  +  Y EL  + +R I
Sbjct: 747 VTEKVHVVFDERESQVYEELNTSTQRQI 774



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 2/131 (1%)

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
            ++ L +K IIFSQF   + ++E  L   G         M+   +  ++  F +D +C  +
Sbjct: 1019 DRGLDEKTIIFSQFTSLLDLLEFPLAHRGWNHTRFDGSMNLKERNAAVTAFTNDPACKIM 1078

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            L+   + + GL+L   + V + +P W+  +E+Q + RAHR+G  R + V  L +  TVE+
Sbjct: 1079 LVSLKAGNSGLNLVAASHVIMFDPFWNPYIEDQAVDRAHRIGQVREVFVHRLLIENTVED 1138

Query: 1106 QMLEFLQDTDR 1116
            +++  LQD  R
Sbjct: 1139 RIVT-LQDQKR 1148


>gi|255072471|ref|XP_002499910.1| SNF2 super family [Micromonas sp. RCC299]
 gi|226515172|gb|ACO61168.1| SNF2 super family [Micromonas sp. RCC299]
          Length = 1201

 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 69/122 (56%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG 1050
            P + ++FSQF + + +I  ++  AG     +      S + + +  FR   + + L+   
Sbjct: 1002 PTQCVVFSQFTKFLDIIGPKIEDAGHAVLRLDGTQRLSQRARVVAKFRRGEAGVLLVSLK 1061

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +ASLGL+L+  +RV L +P W+ ++E+Q I R HR+G TR + V  L +R TVE ++ + 
Sbjct: 1062 AASLGLNLNCASRVILTDPWWNAAIEDQAIDRCHRIGQTREVKVTRLLIRDTVENRIRDL 1121

Query: 1111 LQ 1112
             +
Sbjct: 1122 QE 1123



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 14/140 (10%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW--TDHKKPSAHSLAWDYDVVITTFNRLSA 673
           TLIV P+ +   WK ++ +      L   ++  T  +     +L   +DVV+TT+  ++ 
Sbjct: 534 TLIVCPAIVAQQWKDEVDEKT---DLRCVIYHGTARRHLDERTL-LAHDVVVTTYGTVTG 589

Query: 674 EWGRRKKSP--MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
           E+ +  +SP  +  V W RV+LDE H + +   + +    A  L AS RW L+GTP  N 
Sbjct: 590 EFTKGGESPGALFNVAWWRVILDEAHIIRNRRTMGSVATCA--LQASRRWCLSGTPLMNG 647

Query: 732 PNSQLSHLQPMLKFLHEEAY 751
            +   +    + +FL  + +
Sbjct: 648 VDDAFA----LFRFLRYQPF 663


>gi|260827935|ref|XP_002608919.1| hypothetical protein BRAFLDRAFT_85516 [Branchiostoma floridae]
 gi|229294273|gb|EEN64929.1| hypothetical protein BRAFLDRAFT_85516 [Branchiostoma floridae]
          Length = 1178

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 41/243 (16%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
           ATL+V P+ L+ HWK ++++H   G L ++++    +   H+   +YD+V++T+  +  E
Sbjct: 510 ATLVVCPASLILHWKAEVERHTEDGTLRVYLYHGQNRTKDHTELAEYDLVLSTYELVRKE 569

Query: 675 ---WG-----------------RRKKSPM---MQVHWLRVMLDEGHTLGSSLNLTNKLQM 711
              W                   + + PM   ++V W R++LDE H + +  + T+    
Sbjct: 570 CSSWAADVPTQDGENGENQSDSAKPRGPMPVLLRVIWDRIILDEAHAIKNHKSQTSV--A 627

Query: 712 AISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME 771
           A  L A +RW +TGTP  N     L  + P+L+FL    + +  K W   +    + +  
Sbjct: 628 ACQLRAHSRWAMTGTPIQN----DLMDMYPLLRFLRCSPFDE-MKVWKKWV----DNKTA 678

Query: 772 EGRSRLLQLLHRCMISARKTD-------LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
            G++RL  L+   ++   K         L  +P C +    +  +E+    Y++     R
Sbjct: 679 NGKARLNTLVTSLLLRRTKGQEGRDGRPLVRLPRCSRISHVIKLSEDERTVYDKFYQDTR 738

Query: 825 RNI 827
           +  
Sbjct: 739 KTF 741



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 37/60 (61%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
           ATL+V P+ L+ HWK ++++H   G L ++++    +   H+   +YD+V++T+  +  E
Sbjct: 932 ATLVVCPASLILHWKAEVERHTEDGTLRVYLYHGQNRTKDHTELVEYDLVLSTYELVRKE 991


>gi|186492170|ref|NP_176309.2| SNF2, helicase and zinc finger domain-containing protein [Arabidopsis
            thaliana]
 gi|332195665|gb|AEE33786.1| SNF2, helicase and zinc finger domain-containing protein [Arabidopsis
            thaliana]
          Length = 1280

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 85/157 (54%), Gaps = 4/157 (2%)

Query: 988  KALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALL 1047
            K   +K I+FSQ+ + ++++E  L  + I++  +   M  + + K++  F        ++
Sbjct: 1120 KVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVMI 1179

Query: 1048 MD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQ 1106
            M   +ASLGL++     V +++  W+ + E+Q I RAHR+G TRP+ V    ++ TVE++
Sbjct: 1180 MSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDR 1239

Query: 1107 MLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDFA 1143
            +L   Q   + R ++     + E+   +SH T+ D +
Sbjct: 1240 ILALQQ---KKRMMVASAFGEDEKGSRQSHLTVEDLS 1273



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 86/382 (22%), Positives = 137/382 (35%), Gaps = 104/382 (27%)

Query: 525 ALTWLAKLSPDELSEMETTGLASPILGSYAAGETQGFHKIFQAFGLIRRVEKGITRWYYP 584
           AL+W+A        + ET+G   P  G   A + QG  K      LI + E+        
Sbjct: 563 ALSWMA--------QKETSGF--PCSGGILA-DDQGLGKTVSTIALILK-ERSKPAQACE 610

Query: 585 KTLDNLAFDLAALRLALCEPL-----------------------DSVRLYLSR---ATLI 618
           ++     FDL +     C PL                       DSV     R    TL+
Sbjct: 611 ESTKKEIFDLES-ETGECAPLKPSGRSKHFEHSQLLSNENKVGGDSVGKVTGRPAAGTLV 669

Query: 619 VVPSYLVDHWKTQIQQHV-RPGQLHLFVW-TDHKKPSAHSLAWDYDVVITTFNRLSAEW- 675
           V P+ ++  W  ++ + V     L + V+    +    H LA  YDVV+TTF+ +S E  
Sbjct: 670 VCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDPHELA-KYDVVVTTFSIVSMEVP 728

Query: 676 ---------------------------GRRKK-------------------SPMMQVHWL 689
                                       +++K                    P+ +V W 
Sbjct: 729 KQPLVDDEDEEKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPLAKVSWF 788

Query: 690 RVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHE 748
           RV+LDE  ++    N   ++  A   L A  RW L+GTP  N+    +  L    +FL  
Sbjct: 789 RVVLDEAQSIK---NYKTQVARACWGLRAKRRWCLSGTPIQNS----IDDLYSYFRFLKY 841

Query: 749 EAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ------TIPLCIKE 802
           + Y  +   +   I  P      +G  +L  +L   M+   K  L       ++P    E
Sbjct: 842 DPYS-SYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIE 900

Query: 803 VTFLNFTEEHAGTYNELVVTVR 824
           +  ++FT E    Y++L    R
Sbjct: 901 LRKVDFTVEERDFYSKLEAESR 922


>gi|70986552|ref|XP_748767.1| SWI/SNF family DNA-dependent ATPase [Aspergillus fumigatus Af293]
 gi|66846397|gb|EAL86729.1| SWI/SNF family DNA-dependent ATPase, putative [Aspergillus fumigatus
            Af293]
          Length = 707

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 3/152 (1%)

Query: 966  RQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPM 1025
            R+W N++   K       +  ++   DKVI+FS F   + +IE  +  +G K+      M
Sbjct: 527  RKWVNSSKIEKAAEIIKAIR-DQGTGDKVIVFSHFTALLDLIEVPIARSGWKYRRYDGRM 585

Query: 1026 HSSNKIKSLDMFRHDASCLALLMDGSA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAH 1084
              + +  ++  F     CL LL+   A + GL+L+  + V +MEP W+  +EEQ I R H
Sbjct: 586  TPAERGSAISSFASQPDCLVLLVSLKAGNAGLNLTCASNVIIMEPSWNPYIEEQAIGRVH 645

Query: 1085 RMGATRPIHVETLAMRGTVEEQMLEFLQDTDR 1116
            R+G  R + V  L +  T+E ++LE LQ+  R
Sbjct: 646  RIGQERHVRVYRLLVADTIEIRILE-LQEKKR 676



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 12/140 (8%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW 675
           TLIV P+ L+  W+ + +     GQ  +FV+   K          Y VV+TT+  L +E 
Sbjct: 53  TLIVTPAGLIHQWERETENIFGSGQ-RVFVYYRRKGRLTFQDLCQYHVVLTTYGTLCSEL 111

Query: 676 GRRK-KSPMM--QVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNT 731
            ++   SP+      W R++LDE   +    N  +K  MA   + A+ RW L+GTP  N 
Sbjct: 112 KQKPYDSPIFGDGRAWQRIILDEAQCIK---NARSKTAMACCEVAATYRWCLSGTPLMN- 167

Query: 732 PNSQLSHLQPMLKFLHEEAY 751
               L  L  +LKFL  + Y
Sbjct: 168 ---HLGELYSLLKFLRIQPY 184


>gi|240276209|gb|EER39721.1| SNF2 family helicase [Ajellomyces capsulatus H143]
          Length = 1198

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 19/136 (13%)

Query: 607 SVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK--KPSAHSLAWDYDVV 664
           + +L L   TLI+VPS LVDHW ++I +H +   L + V  D +   P    L  +YD++
Sbjct: 424 ATKLQLCSGTLIIVPSNLVDHWLSEIDKHTQ--GLKVLVLRDSRCATPQPEQL-LEYDII 480

Query: 665 ITTFNRLSAEW---GRR---------KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
           +  F++   EW   GRR         ++SP+ ++HWLRV++DEGH   +    +      
Sbjct: 481 L--FSKPRFEWEAGGRRSSGLSMEPTEESPLKKLHWLRVIVDEGHNFAAKGGRSTAAHTL 538

Query: 713 ISLTASNRWLLTGTPT 728
             L    RW+++GTP+
Sbjct: 539 GQLHIERRWVVSGTPS 554



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 1/110 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIF +       I + L + G++F    + + +  + + L +F    +   LLMD  
Sbjct: 932  EKIIIFYEGNNTGFYIAEGLELLGVEFRIYANTLKTKTRSEYLSLFNETETVRVLLMDLR 991

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR 1100
             A+ GL ++  +RVF++ PIWD + E Q I RAHR+   +P++VETL ++
Sbjct: 992  QAAHGLHIACASRVFIVNPIWDPNFESQAIKRAHRISQNKPVYVETLVLK 1041


>gi|405372149|ref|ZP_11027413.1| Superfamily II DNA/RNA helicase, SNF2 family [Chondromyces apiculatus
            DSM 436]
 gi|397088522|gb|EJJ19503.1| Superfamily II DNA/RNA helicase, SNF2 family [Myxococcus sp.
            (contaminant ex DSM 436)]
          Length = 1181

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 64/118 (54%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            + ++FSQF  H+ ++ + L   GI +  +     +  + + +  F+     L L+   + 
Sbjct: 1017 RALVFSQFTSHLALVREVLDAEGIDYEYLDGQTPAGARAERVRAFQEGDVPLFLISLKAG 1076

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+  T V  ++P W+ ++E+Q   RAHR+G  RP+ V  L  RGT+EEQML  
Sbjct: 1077 GFGLNLTAATTVIHLDPWWNPAVEDQASDRAHRIGQERPVTVYRLVTRGTIEEQMLSL 1134


>gi|9972383|gb|AAG10633.1|AC022521_11 Similar nucleotide excision repair proteins [Arabidopsis thaliana]
          Length = 627

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 1/117 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K I+FSQF   + +I   L  +G+    +   M  + K  +L  F+ +  C  LLM   A
Sbjct: 444  KAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLLMSLQA 503

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              + L+L+  + VF+M+P W+ ++E Q   R HR+G  +P+ V    M  TVEE++L
Sbjct: 504  GGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKIL 560



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 11/142 (7%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW 675
           TL++VP   +  W  +I +   PG   +  +   K+        +YD V+TT   +  E+
Sbjct: 86  TLVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDKNVQKLMNYDFVLTTSPIVENEY 145

Query: 676 GRRK-----KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
            + +      SP+  + W R+++DE H + +  + T K   A  L A+ RW L+GTP  N
Sbjct: 146 RKDEGVDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFA--LEATYRWALSGTPLQN 203

Query: 731 TPNSQLSHLQPMLKFLHEEAYG 752
                +  L  +++FL    Y 
Sbjct: 204 ----DVDELYSLIRFLRVSPYS 221


>gi|186686080|ref|YP_001869276.1| SNF2-related protein [Nostoc punctiforme PCC 73102]
 gi|186468532|gb|ACC84333.1| SNF2-related protein [Nostoc punctiforme PCC 73102]
          Length = 1403

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 66/118 (55%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++H+H+I   L   GI +  +      + + K +D F+  +  + L+   + 
Sbjct: 1253 KALVFSQFVDHLHIIRDYLEQQGINYQYLDGSTSVAERKKRVDAFQAGSGDVFLISLKAG 1312

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+    V   +P W+ ++E+Q   RAHR+G  RP+ +  L  + T+EE+++E 
Sbjct: 1313 GTGLNLTAADYVIHTDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEEKIVEL 1370


>gi|392964076|ref|ZP_10329497.1| SNF2-related protein [Fibrisoma limi BUZ 3]
 gi|387846971|emb|CCH51541.1| SNF2-related protein [Fibrisoma limi BUZ 3]
          Length = 995

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 7/153 (4%)

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASC 1043
            LES      KV++FSQF++H+ V+ Q L    IK+A  Y    + ++   +++F+ D S 
Sbjct: 838  LESAMTDHHKVLVFSQFIKHLSVVRQYLKEKNIKYA--YLDGSTQDRQSQVELFQTDDSV 895

Query: 1044 -LALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGT 1102
             L L+   +  LG +L+    VF+++P W+ ++E Q + RAHR+G  + +       + T
Sbjct: 896  KLFLISLKAGGLGHNLTAADYVFILDPWWNPAIEAQAVDRAHRIGQKKTVFTYKFITKNT 955

Query: 1103 VEEQMLEFLQDTDRCRRLLKEELVKPEREGARS 1135
            VEE++L       R ++ L   L+  E    +S
Sbjct: 956  VEEKILAL----QRSKQKLASNLIATEENFVKS 984



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 112/248 (45%), Gaps = 28/248 (11%)

Query: 588 DNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWT 647
           D++      + LA+ +      L ++  TL+V+P+ L+ +W+ + ++      L + V+T
Sbjct: 562 DDMGLGKTVMTLAMLQ--GQKELGITEPTLLVMPTSLLYNWELEARKFT--PDLRVMVYT 617

Query: 648 DHKKPSAHSLAWDYDVVITTFN--RLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNL 705
              +    +   DYD+++T++   R+  E        +    +  V+LDE   + +  + 
Sbjct: 618 GTYRDKNTAQFDDYDLILTSYGIVRIDIEL-------IKDYRFNYVILDESQAIKNPSSH 670

Query: 706 TNKLQMAISLTASNRWLLTGTPTPNTPN---SQLSHLQPMLKFLHEEAYGQNQKAWDGGI 762
             K  M   L ++NR +LTGTP  N+     +Q++ + P L  L  +++ +N+       
Sbjct: 671 ITKAVM--QLNSANRLILTGTPLENSTMDLWTQMTFINPGL--LGSQSFFRNE------F 720

Query: 763 LRPFEAEMEEGRS-RLLQLLHRCMISARKTDLQT-IPLCIKEVTFLNFTEEHAGTYNELV 820
             P E   +E ++ RL  L+   M+   K  + T +P  ++ + +   T E    Y E  
Sbjct: 721 QVPIEKRHDEQKTGRLYGLIKPFMLRRNKAQVATDLPEKVESILYSEMTPEQEKQYEEAK 780

Query: 821 VTVRRNIL 828
              R  IL
Sbjct: 781 SYYRNLIL 788


>gi|17232392|ref|NP_488940.1| SWI/SNF family helicase [Nostoc sp. PCC 7120]
 gi|17134038|dbj|BAB76599.1| SWI/SNF family helicase [Nostoc sp. PCC 7120]
          Length = 869

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 65/118 (55%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++H+H+I   L   GI +  +      S + K +D F+     + L+   + 
Sbjct: 719  KALVFSQFVDHLHIIRNYLDKQGINYQYLDGSTSVSERKKRVDAFQAGNGDVFLISLKAG 778

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+    V   +P W+ ++E+Q   RAHR+G  RP+ +  L  + T+EE+++E 
Sbjct: 779  GTGLNLTAADYVIHTDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEEKIVEL 836


>gi|320591376|gb|EFX03815.1| snf2 family helicase [Grosmannia clavigera kw1407]
          Length = 978

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 92/191 (48%), Gaps = 21/191 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQ-LHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + ++TL+V P  L+  W+ +I+  V  G+ L + V    ++ +  S   ++DVVITT+  
Sbjct: 289 VEKSTLVVAPLALIRQWEAEIKDKVSGGRRLKVCVHHGPQRTTRASDLAEFDVVITTYQI 348

Query: 671 LSAEWGRRK---KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGT 726
           L +E G      KS    V+W RV+LDE H++    N   K   A  +L+A  RW LTGT
Sbjct: 349 LVSEHGHSSEALKSGCFGVNWYRVILDEAHSIK---NRNAKATKACCALSAEFRWCLTGT 405

Query: 727 PTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS----RLLQLLH 782
           P  N     L  LQ ++ FL    Y  N   W   I  P    ++ GR     R L  L 
Sbjct: 406 PMQNN----LDELQSLVNFLRITPY-DNLAEWRAHIDHP----LKNGRGYLAIRRLHSLL 456

Query: 783 RCMISARKTDL 793
           RC +  R  ++
Sbjct: 457 RCFMKRRTKEI 467



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + ++   L  AG+        M +  +  SL   R DA+   LL     
Sbjct: 756  KFIVFSQFTSMLDLLGPFLERAGLGHVQYDGRMRNDAREASLRSLREDAATRVLLCSLKC 815

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             +LGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +  TVE+++LE 
Sbjct: 816  GALGLNLTAATRVVILEPFWNPFVEEQAIDRVHRLTQTVDVTVYKLTIADTVEQRILEL 874


>gi|414886860|tpg|DAA62874.1| TPA: hypothetical protein ZEAMMB73_835679 [Zea mays]
          Length = 637

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 1/101 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +I+  L  +GIK   +   M+ + K +++D F HDA C   LM   +
Sbjct: 528  KGIVFSQFTSFLDLIQFSLERSGIKCVQLNGAMNITEKGRAIDTFTHDADCRVFLMSLKA 587

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPI 1092
              + L+L+  + VFLM+P W+ ++E Q   R HR+G  +PI
Sbjct: 588  GGVALNLTVASHVFLMDPWWNPAVENQAQDRIHRIGQFKPI 628



 Score = 47.8 bits (112), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 662 DVVITTFNRLSAEWGR--RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
           D V   F  L+ E GR  R +SP+  V W RV+LDE H +       N  +   +L +  
Sbjct: 172 DEVNKDFQELADELGRQLRGQSPLHSVRWERVILDEAHFIKD--RRCNTARAVFALESEC 229

Query: 720 RWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
           +W L+GTP  N    ++  L  +++FL 
Sbjct: 230 KWALSGTPLQN----RVGELYSLIRFLQ 253


>gi|326803590|ref|YP_004321408.1| SNF2 family N-terminal domain protein, partial [Aerococcus urinae
            ACS-120-V-Col10a]
 gi|326650654|gb|AEA00837.1| SNF2 family N-terminal domain protein [Aerococcus urinae
            ACS-120-V-Col10a]
          Length = 970

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 77/150 (51%), Gaps = 4/150 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            ++++FSQF   + +++  L    I +  +    +   +   ++ F      + L+   + 
Sbjct: 816  RILVFSQFTSMLAIMQDYLDQEAINYFIIEGKTNKEKRQDQVNRFNQGEGSVFLISLRAG 875

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
             +G++L+    VFL +  W+ S+EEQ I RAHR+G T+ + V      GT+EE++ E  +
Sbjct: 876  GVGINLTGADTVFLYDLWWNPSVEEQAIGRAHRIGQTKDVEVYRFITEGTIEERIAELQE 935

Query: 1113 DTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
            +    +R L +EL + E  G  SH T+ D 
Sbjct: 936  E----KRHLFDELFQDEEMGESSHLTMDDL 961


>gi|427721070|ref|YP_007069064.1| SNF2-like protein [Calothrix sp. PCC 7507]
 gi|427353506|gb|AFY36230.1| SNF2-related protein [Calothrix sp. PCC 7507]
          Length = 1416

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 68/120 (56%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++H+H+I   L   GI +  +     +  + K +D F+  +  + L+   + 
Sbjct: 1267 KALVFSQFVDHLHIIRDYLDKQGINYQYLDGSTPAPERKKRVDAFQAGSGDVFLISLKAG 1326

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
              GL+L+    V  M+P W+ ++E+Q   RAHR+G  RP+ +  L  + T+E+++++  Q
Sbjct: 1327 GTGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEDKIVDLHQ 1386


>gi|310822580|ref|YP_003954938.1| snf2/helicase domain-containing protein [Stigmatella aurantiaca
            DW4/3-1]
 gi|309395652|gb|ADO73111.1| SNF2/helicase domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1282

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 11/145 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            +V++FSQF  H+ ++ +++   G  +  +        + K +  F+     + L+   + 
Sbjct: 1113 RVLVFSQFTSHLELVREEVERGGFTYQYLDGSTPLGARAKRIQAFQEGKGDVFLISLKAG 1172

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF-- 1110
              G++L+    V  ++P W+ ++E+Q   RAHR+G TRP+ V  L  RGT+EEQ+L    
Sbjct: 1173 GTGINLTAADYVIHLDPWWNPAVEDQATDRAHRIGQTRPVTVYRLIARGTIEEQILSLHS 1232

Query: 1111 ---------LQDTDRCRRLLKEELV 1126
                     L+ TD   RL  ++L+
Sbjct: 1233 DKRALVAGVLEGTDVAARLTTKDLL 1257


>gi|336385477|gb|EGO26624.1| hypothetical protein SERLADRAFT_447781 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 726

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 2/127 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K IIFSQF   + +IE  L   GIK+      M    +  SL+  R+  +   +L+   
Sbjct: 562  EKTIIFSQFTSMLDLIEPFLAAKGIKYVRYDGSMSKDKREASLEKIRNSNNTRLILISFK 621

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S GL+L+    V L++  W+ ++EEQ   RAHR G TR +++  L +  TVE ++LE 
Sbjct: 622  AGSTGLNLTACNNVILVDMWWNPALEEQAFDRAHRFGQTRDVNIFKLTIEKTVEARILE- 680

Query: 1111 LQDTDRC 1117
            LQ+  R 
Sbjct: 681  LQEKKRA 687



 Score = 43.5 bits (101), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 60/292 (20%), Positives = 110/292 (37%), Gaps = 76/292 (26%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH--KKPSAHSLAWDYDVVITTFNRLS 672
           +TL+V P  LV  W ++IQ+      + L V   H   + S  +      VV+T+++ L+
Sbjct: 160 STLVVCPVSLVSQWASEIQKMA----IGLRVIEHHGASRTSDPTRLQQAHVVVTSYSILA 215

Query: 673 AEWGRRK---------------------------------------------------KS 681
           +E+G  K                                                   K 
Sbjct: 216 SEYGAFKPDVKDETSKKSKAKAKKAASGSNSDDDDTDSSSEPFGKTLTKKKPASKTKAKD 275

Query: 682 PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
            +  ++W R++LDE H +    N   K  +A  +L    RW LTGTP  N+    +  L 
Sbjct: 276 ALFHINWFRIVLDEAHNIK---NRNTKAALACCALEGKFRWCLTGTPMQNS----VEELY 328

Query: 741 PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD-------L 793
            ++KFL       +   ++  I +P ++       + LQ++ + ++  R+ D       +
Sbjct: 329 SLIKFLRIRPL-NDWHTFNEQINKPVKSGRATRAMKRLQVVLKAIMLRRRKDHVLNGKAI 387

Query: 794 QTIPLCIKEVTFLNFTEEHAGTYNEL---VVTVRRNILMADWNDPSHVESLL 842
             +P    E+    F ++    Y+ L   + T    ++ AD    S+   LL
Sbjct: 388 LQLPARKVEIVACEFDKDEKAFYSALENKMSTELDKLVQADMATKSYTHVLL 439


>gi|302892613|ref|XP_003045188.1| SNF2 superfamily RAD5 protein [Nectria haematococca mpVI 77-13-4]
 gi|256726113|gb|EEU39475.1| SNF2 superfamily RAD5 protein [Nectria haematococca mpVI 77-13-4]
          Length = 1146

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +IE  LT A IK+  +   M    +   L  F        LL+   A
Sbjct: 996  KSVVFSQFTSFLSLIEPALTKANIKYLRLDGSMAQKARAAVLTEFTERKGFTVLLLSLRA 1055

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RVF+M+P W  ++E Q I R HRMG    + V+   ++ +VEE+ML+
Sbjct: 1056 GGVGLNLTSAGRVFMMDPWWSFAVEAQAIDRVHRMGQESEVQVKRFVVKESVEERMLK 1113



 Score = 66.6 bits (161), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS-------AHSLAWDYDVVITT- 667
           TL+V P  L+  W+++ ++  + G + + ++  ++K +       A + A   D+VIT+ 
Sbjct: 566 TLVVAPMSLLSQWQSEAEKASKEGTMKIELYYGNEKSNNLQALCCASNAASAPDIVITSY 625

Query: 668 ------FNRLSAEWGRRK-KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
                 F+ ++A+ G +   + +  + + RV+LDE H + +  + T K    IS  A +R
Sbjct: 626 GVVLSEFSSIAAKNGDKSFHNGLFSLKFFRVILDEAHHIKNRSSKTAKACYEIS--ADHR 683

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE+        ++Q 
Sbjct: 684 WALTGTPIVN----KLEDLFSLVRFLGVEPWN-NFSFWRTFITVPFESGEFVRALDVVQT 738

Query: 781 LHRCMISARKTDLQT---IPLCI---KEVTFLN--FTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R  D++T    PL +   K++  +N   +E   G Y+ +    +R       
Sbjct: 739 VLEPLVLRRTKDMKTPDGKPLVLLPPKQIEIVNVELSETERGVYDYIFNKAKRTF----- 793

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
               +VE+    K +      I  LR SCC
Sbjct: 794 --SQNVEAGTVMKAFTTIFAQILRLRQSCC 821



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 17/98 (17%)

Query: 165 LKLFPHQQAAVEWMLHREW----NAEVLRHPLY------------IDLATEDGF-YFYVN 207
           + L P+Q+ A+ WM+ +E     N E   HPL+             DL   +G   FYVN
Sbjct: 428 MDLRPYQKQALHWMMAKEKDEKSNREPSMHPLWEEYTWPLKDVDDKDLPPVEGQPNFYVN 487

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             SGD++       +   GG+  DE GLGKTI  LSL+
Sbjct: 488 PYSGDLSLDFPVQEQHCLGGILADEMGLGKTIQMLSLV 525


>gi|383808992|ref|ZP_09964516.1| SNF2 family N-terminal domain / helicase C-terminal domain
            multi-domain protein [Rothia aeria F0474]
 gi|383448019|gb|EID50992.1| SNF2 family N-terminal domain / helicase C-terminal domain
            multi-domain protein [Rothia aeria F0474]
          Length = 1371

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 70/127 (55%), Gaps = 8/127 (6%)

Query: 990  LPD------KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASC 1043
            LPD      +V++FSQF  ++  I ++L   GIK   +Y    + N+ + L  F    + 
Sbjct: 1211 LPDLLTGGHRVLVFSQFTGYLRTISRRLEAEGIKH--LYLDGATRNRPQVLKDFADGVAP 1268

Query: 1044 LALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTV 1103
            + L+   +   GL+L+     F+M+P W+ + E+Q + R HR+G  R +HV  L  +GT+
Sbjct: 1269 VFLISLKAGGFGLNLTEADHCFIMDPWWNPAAEQQAVDRLHRIGQERDVHVHRLVAQGTI 1328

Query: 1104 EEQMLEF 1110
            EE++++ 
Sbjct: 1329 EEKVMDL 1335


>gi|392579255|gb|EIW72382.1| hypothetical protein TREMEDRAFT_70705 [Tremella mesenterica DSM 1558]
          Length = 741

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 8/153 (5%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K I+FSQF     + E  L  AGI +      M    +  SL+  R  ++   +L+   
Sbjct: 572  EKTIVFSQFTSFFDLAEPFLKDAGINYVRYDGSMRDDKRQASLETIRSSSTVRVILISFK 631

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S GL+L+    V LM+  W+ ++E+Q   RAHR+G T+ +++  L +  TVE+++LE 
Sbjct: 632  AGSTGLNLTCCNNVLLMDLWWNPALEDQAFDRAHRLGQTKDVNIYKLTIEETVEKRILE- 690

Query: 1111 LQDTDRCRRLLKEELVKPEREGARSHR-TLHDF 1142
            LQD+   R L K  L     EGA++ + TL+D 
Sbjct: 691  LQDSK--RELAKAAL---SGEGAKNLKLTLNDL 718



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 31/62 (50%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAE 674
            TLI+ P  + + W  +I+    PG L + +     +     +   +DVVITTF  L+AE
Sbjct: 221 GTLIIAPLAVNEQWAAEIRTKTSPGLLKVRIHHGPSRAKTGKILESFDVVITTFQTLAAE 280

Query: 675 WG 676
            G
Sbjct: 281 HG 282


>gi|307186121|gb|EFN71846.1| Transcription termination factor 2 [Camponotus floridanus]
          Length = 830

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 21/226 (9%)

Query: 606 DSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVI 665
           D   LY    TL+V P+ L+  W  ++Q   + G L + ++    + S        D+VI
Sbjct: 305 DHKHLYHKGGTLVVCPASLLFQWNNEVQNRCKRGLLTVEIYHGSNRESVPKRLSKNDIVI 364

Query: 666 TTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLT 724
           TT+N LS E   + +S + +++W RV+LDE H +    N  ++  +A+  L A+ RW LT
Sbjct: 365 TTYNILSRE--HKTRSTLYKINWKRVILDEAHVIR---NHKSQASLAVCELKANKRWALT 419

Query: 725 GTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRC 784
           GTP  N    +   L  +LKFL    +  + + W     R  + +   G  RL  ++   
Sbjct: 420 GTPIQN----KAMDLYSILKFLKCSPF-DDLRVWK----RWVDNKNAAGNQRLATVMKSL 470

Query: 785 MIS------ARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
           M+         K DL+++P  + E   +    +    Y ++++  R
Sbjct: 471 MLRRTKQELIEKGDLESLPDKLIEEVIVKLDPQEQLVYEKVLIYSR 516



 Score = 47.0 bits (110), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 9/155 (5%)

Query: 992  DKVIIFSQFLEHIHVIEQQLT-VAGIKFAGMYSPMHSSNKIKSLDMF--RHDASCLALLM 1048
            DK+II SQ+   ++VI   L+ + G  F+     +   ++   +D F  R+    + LL 
Sbjct: 675  DKLIIVSQWTALLNVIASHLSSIKGATFSKFTGNVAIKDRQSIIDSFNSRNSDPRILLLS 734

Query: 1049 DGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +  +GL+L     + L +  W+  +E Q   R +R G  + +HV       T+EE+ +
Sbjct: 735  LTAGGVGLNLVGANHLLLFDIHWNPQLETQAQDRIYRFGQKKNVHVYKFICLNTIEER-I 793

Query: 1109 EFLQDTDRCRRL-LKEELVKPEREGARSHRTLHDF 1142
            + LQD    R+L +   ++  ++  + +  TL+D 
Sbjct: 794  KGLQD----RKLEIASNVLSGDKNNSATKLTLNDL 824


>gi|73540253|ref|YP_294773.1| SNF2-like protein [Ralstonia eutropha JMP134]
 gi|72117666|gb|AAZ59929.1| SNF2-related:Helicase, C-terminal [Ralstonia eutropha JMP134]
          Length = 988

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            KV++FSQF++ + ++ Q +  AG+    +     ++ + + +  F+     + L+   + 
Sbjct: 833  KVLVFSQFVDFLQLLRQGIEQAGLALQYLDGATPAAERTRRVAAFQAGEGDVFLISLKAG 892

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
              GL+L+    V + +P W+ + E+Q + RAHR+G  RP+ V  L   GT+EE+++E  +
Sbjct: 893  GFGLNLTAADYVIIADPWWNPAAEDQAMGRAHRIGQQRPVTVYRLITAGTIEERIVELHK 952

Query: 1113 DTDRCRRLLKEELVKPEREGA 1133
            D    +R L + L+  + E A
Sbjct: 953  D----KRALADGLLDADDEAA 969


>gi|83767491|dbj|BAE57630.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1103

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 106/242 (43%), Gaps = 44/242 (18%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLA--WDYDVVITTFNRL 671
           + TLI+ P  L+  WK +I + ++PG+  L V+  H +  A S     +YDVV+TTF  L
Sbjct: 442 KPTLIIAPVALMQQWKREIGRILKPGRHQLSVYILHGEKRAVSFRDLKNYDVVLTTFGTL 501

Query: 672 SAEWGRRKKSPMMQ-----------------------VHWLRVMLDEGHTLGSSLNLTNK 708
           S+E  RR+K   +Q                         W RV++DE   +    N   K
Sbjct: 502 SSELKRREKYDELQSSGANEQTLSREIAKSLPCLGPSSKWYRVIIDEAQCIK---NRNTK 558

Query: 709 LQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFE 767
             +A   L A+ RW ++GTP  N     +  L  +L+FL  + Y  N + ++    RP +
Sbjct: 559 AALACCRLNATYRWCMSGTPMMNN----VQELHSLLRFLRIKPYS-NLERFNHDFTRPLK 613

Query: 768 A---EMEEGRSRLLQLLHRCMISARKTD-------LQTIPLCIKEVTFLNFTEEHAGTYN 817
                 +    R LQ+L + ++  R  D       +  +P  I E     F+E+    Y+
Sbjct: 614 GSSVSAQRKAMRQLQVLLKAVLLRRTKDSKIDGKPILQLPRRISEKVHAVFSEDELELYS 673

Query: 818 EL 819
            L
Sbjct: 674 SL 675



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K IIFSQF   + ++E  +   G  +      M   ++  ++  F     C  +L+   
Sbjct: 936  EKTIIFSQFTSLLDLLEVPIVRQGWGYRRYDGSMKPGDRNSAVLDFTDSPDCKIILVSLK 995

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + + GL+L   ++V + +P W+  +EEQ I RAHR+G  R + +  + ++ TVE+++LE 
Sbjct: 996  AGNSGLNLVAASQVIIFDPFWNPYIEEQAIDRAHRIGQVREVQIHRILVQNTVEDRILE- 1054

Query: 1111 LQDTDR 1116
            LQD  R
Sbjct: 1055 LQDKKR 1060


>gi|359423419|ref|ZP_09214556.1| putative helicase [Gordonia amarae NBRC 15530]
 gi|358241342|dbj|GAB04138.1| putative helicase [Gordonia amarae NBRC 15530]
          Length = 1115

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 1/142 (0%)

Query: 976  KQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLD 1035
            K D     L +  A     ++FSQF   +H++   L   GI ++ +   M+++ + +++ 
Sbjct: 949  KVDYLTEQLPTLVAEGHNALVFSQFTRFLHILAAHLDKVGIAYSYLDGSMNAAGRAEAVR 1008

Query: 1036 MFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
             F    + + L+   +   GL+L+     F+ +P W+ + E Q + RAHR+G +RP++V 
Sbjct: 1009 RFTSGETEVFLISLKAGGFGLNLTEADYCFVCDPWWNPAAEAQAVDRAHRIGQSRPVNVY 1068

Query: 1096 TLAMRGTVEEQMLEFLQDTDRC 1117
             L   GT+EE+++  LQD  R 
Sbjct: 1069 RLVSAGTIEERVVA-LQDRKRA 1089


>gi|367003543|ref|XP_003686505.1| hypothetical protein TPHA_0G02360 [Tetrapisispora phaffii CBS 4417]
 gi|357524806|emb|CCE64071.1| hypothetical protein TPHA_0G02360 [Tetrapisispora phaffii CBS 4417]
          Length = 1172

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 8/137 (5%)

Query: 988  KALPDKVIIFSQFLEHIHVIEQQL-------TVAGIKFAGMYSPMHSSNKIKSLDMFRHD 1040
            K+  ++V++FSQF  ++ ++E++L       T    KF G  S    SN ++   +   +
Sbjct: 1012 KSPGEQVVVFSQFSSYLDILEKELMQALPKNTTEIYKFDGKLSLKERSNVLQQFKIKSLE 1071

Query: 1041 ASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR 1100
               + LL   +  +GL+L+  +  F+M+P W  SME+Q + R HR+G   P+ V    + 
Sbjct: 1072 KQKILLLSLKAGGVGLNLTCCSHAFIMDPWWSPSMEDQAVDRIHRIGQKNPVTVIKFIIS 1131

Query: 1101 GTVEEQMLEFLQDTDRC 1117
             T+EE+ML  +QD  R 
Sbjct: 1132 NTIEEKMLR-IQDRKRS 1147



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 133/304 (43%), Gaps = 52/304 (17%)

Query: 611 YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYD----VVIT 666
           Y S+ TL+VVP  L+  W  +        +L   ++      S  SL         VV+T
Sbjct: 588 YASKTTLVVVPMSLLTQWYEEFNSVNAKDELKCEIYYGGNVSSLKSLLIRNKNPPTVVLT 647

Query: 667 TFNRLSAEWGRRKK-----SP------MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISL 715
           T+  +  EW +  K     +P      +  V + R++LDEGH + +  N+T+K    ++L
Sbjct: 648 TYGIVQNEWIKLSKVTSTSTPSGKNLGLFSVKFFRIILDEGHIIRNRSNVTSK--AVLNL 705

Query: 716 TASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRS 775
           +   +W+LTGTP  N    ++  L  ++ FL+ E + Q  + W   +  PFE   ++   
Sbjct: 706 SGERKWVLTGTPIIN----RIDDLYNLINFLNIEPWSQ-VRFWKNFVTIPFE---QKEFK 757

Query: 776 RLLQLLHRCM--ISARKTD---------LQTIPLCIKEVTFLNFTEEHAGTYNELV---- 820
           +   +++  +  IS R+T          L  +P     +  LN  E  +  YN L+    
Sbjct: 758 KAFNIVNSIIEPISLRRTKQMKDTNGEPLVKLPAIEVLIEKLNMNEPQSDVYNYLLQGAE 817

Query: 821 VTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHI-KVTDAGEDIQET 879
            +VR+ I   +         LL  K++      I  LR +CC    + K  D+ ED+++ 
Sbjct: 818 QSVRKGIQQGN---------LL--KKYSTILVHILRLRQACCDIQLLNKSDDSDEDLRDV 866

Query: 880 MDVL 883
             +L
Sbjct: 867 SPIL 870



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 2/51 (3%)

Query: 197 ATEDGFYFYVNTVSGDIATGTAPTMRD-FHGGMFCDEPGLGKTITALSLIL 246
            T +  YFY N  +G  A    P MR    GG+  DE GLGKTI+AL+LIL
Sbjct: 504 VTFEANYFYSNLYTGKFAI-ERPIMRSTLKGGILADEMGLGKTISALALIL 553


>gi|88857070|ref|ZP_01131713.1| helicase [Pseudoalteromonas tunicata D2]
 gi|88820267|gb|EAR30079.1| helicase [Pseudoalteromonas tunicata D2]
          Length = 1402

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 66/120 (55%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K +IFSQF+ H+ +I+Q L    I +  +     +  + + ++ F+     + L+   + 
Sbjct: 1251 KALIFSQFVGHLALIKQHLDAQDISYQYLDGSTPTKERQQRVNAFQRGEGDVFLISLKAG 1310

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
              GL+L+    V  M+P W+ ++EEQ   RAHRMG  RP+ V  L  +GT+EEQ++   Q
Sbjct: 1311 GSGLNLTAADYVIHMDPWWNPAVEEQASDRAHRMGQQRPVTVYRLIAKGTIEEQIVAMHQ 1370


>gi|336372651|gb|EGO00990.1| hypothetical protein SERLA73DRAFT_167178 [Serpula lacrymans var.
            lacrymans S7.3]
          Length = 816

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 2/127 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K IIFSQF   + +IE  L   GIK+      M    +  SL+  R+  +   +L+   
Sbjct: 652  EKTIIFSQFTSMLDLIEPFLAAKGIKYVRYDGSMSKDKREASLEKIRNSNNTRLILISFK 711

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A S GL+L+    V L++  W+ ++EEQ   RAHR G TR +++  L +  TVE ++LE 
Sbjct: 712  AGSTGLNLTACNNVILVDMWWNPALEEQAFDRAHRFGQTRDVNIFKLTIEKTVEARILE- 770

Query: 1111 LQDTDRC 1117
            LQ+  R 
Sbjct: 771  LQEKKRA 777



 Score = 43.5 bits (101), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 60/292 (20%), Positives = 110/292 (37%), Gaps = 76/292 (26%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH--KKPSAHSLAWDYDVVITTFNRLS 672
           +TL+V P  LV  W ++IQ+      + L V   H   + S  +      VV+T+++ L+
Sbjct: 250 STLVVCPVSLVSQWASEIQKMA----IGLRVIEHHGASRTSDPTRLQQAHVVVTSYSILA 305

Query: 673 AEWGRRK---------------------------------------------------KS 681
           +E+G  K                                                   K 
Sbjct: 306 SEYGAFKPDVKDETSKKSKAKAKKAASGSNSDDDDTDSSSEPFGKTLTKKKPASKTKAKD 365

Query: 682 PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQ 740
            +  ++W R++LDE H +    N   K  +A  +L    RW LTGTP  N+    +  L 
Sbjct: 366 ALFHINWFRIVLDEAHNIK---NRNTKAALACCALEGKFRWCLTGTPMQNS----VEELY 418

Query: 741 PMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTD-------L 793
            ++KFL       +   ++  I +P ++       + LQ++ + ++  R+ D       +
Sbjct: 419 SLIKFLRIRPLN-DWHTFNEQINKPVKSGRATRAMKRLQVVLKAIMLRRRKDHVLNGKAI 477

Query: 794 QTIPLCIKEVTFLNFTEEHAGTYNEL---VVTVRRNILMADWNDPSHVESLL 842
             +P    E+    F ++    Y+ L   + T    ++ AD    S+   LL
Sbjct: 478 LQLPARKVEIVACEFDKDEKAFYSALENKMSTELDKLVQADMATKSYTHVLL 529


>gi|255075383|ref|XP_002501366.1| SNF2 super family [Micromonas sp. RCC299]
 gi|226516630|gb|ACO62624.1| SNF2 super family [Micromonas sp. RCC299]
          Length = 961

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 1/120 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K I+FSQ+   I +++ +L       A +   M  + +  +L  FR D +   +LM   
Sbjct: 809  NKAIVFSQYTSMIEIVDWRLKKDRFTVAKLLGSMPITQRAANLKAFREDPNVSVILMSLK 868

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            S   GL+L     VF++EP W+ ++E Q I RAHR+G TR +     + + T+EE+M++ 
Sbjct: 869  SGGEGLNLQAANYVFVLEPWWNPAVEMQAIMRAHRIGQTRGVTAVRFSTKDTIEERMMQL 928



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 38/73 (52%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEW 675
           TLIVVP+  +  W+ +I+   +PG L + V+   +K  +       DVV+TT+  +  EW
Sbjct: 218 TLIVVPTSALVQWEDEIRNCTQPGSLSVLVYYSDRKTMSKETLEGVDVVLTTYPVVEGEW 277

Query: 676 GRRKKSPMMQVHW 688
            +     M++  +
Sbjct: 278 RKVINRAMVECEY 290


>gi|406833986|ref|ZP_11093580.1| SNF2-related protein [Schlesneria paludicola DSM 18645]
          Length = 1143

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 3/138 (2%)

Query: 976  KQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLD 1035
            K D+  P++E       K ++FSQF   + ++   L   GI +   Y    + ++ + ++
Sbjct: 978  KLDVLIPHIEELLEEKHKTLVFSQFTSMLSIVRHHLDKKGIVYE--YLDGQTRDRKERVE 1035

Query: 1036 MFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
             F+ D +C   L+   +  LGL+L+    VF+++P W+ ++E Q I RAHR+G TR +  
Sbjct: 1036 RFQADENCGVFLISLKAGGLGLNLTAADYVFILDPWWNPAVETQAIDRAHRVGQTRQVFA 1095

Query: 1095 ETLAMRGTVEEQMLEFLQ 1112
              L  + TVEE++ E  Q
Sbjct: 1096 YRLICKNTVEEKIAELQQ 1113



 Score = 46.2 bits (108), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 34/248 (13%)

Query: 585 KTLDNLAFDLAALRLALCEPLDSVRLYLSR--ATLIVVPSYLVDHWKTQIQQHVRPGQLH 642
           KT+  LAF            L+  RL + R   +L+VVP  L+ +WK + ++   PG + 
Sbjct: 718 KTIQMLAF------------LEDRRLRVKRRNPSLVVVPKSLLFNWKHEAERFT-PG-IK 763

Query: 643 LFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSS 702
           +  +    +         YD+++TT+  L     RR    + ++ +  V+LDE   + +S
Sbjct: 764 VLEYAGLDRAKFRDDFTKYDLILTTYGTL-----RRDVLLLKELSFDYVILDEAQAIKNS 818

Query: 703 LNLTNKLQMAIS-LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGG 761
              T+++  A+  L A +R  L+GTP  N     L  L  + +FL+    G++  A+   
Sbjct: 819 ---TSQVAKAVRLLQAKHRVGLSGTPIEN----HLGDLCSIFEFLNPGMLGRS-SAFKQH 870

Query: 762 ILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQT-IPLCIKEVTFLNFTEEHAGTYNELV 820
              P     +E R  L + L   ++   K  + + +P  +++  F    +E    YNEL 
Sbjct: 871 AADPTN---QETRRVLAEGLRPLILRRTKQSVASELPEKLEQTIFCEMGDEQQRLYNELR 927

Query: 821 VTVRRNIL 828
              R ++L
Sbjct: 928 DHYRESLL 935


>gi|389642223|ref|XP_003718744.1| hypothetical protein MGG_00338 [Magnaporthe oryzae 70-15]
 gi|351641297|gb|EHA49160.1| hypothetical protein MGG_00338 [Magnaporthe oryzae 70-15]
 gi|440468073|gb|ELQ37256.1| hypothetical protein OOU_Y34scaffold00608g23 [Magnaporthe oryzae
           Y34]
 gi|440489033|gb|ELQ68714.1| hypothetical protein OOW_P131scaffold00220g52 [Magnaporthe oryzae
           P131]
          Length = 1151

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 76/140 (54%), Gaps = 18/140 (12%)

Query: 604 PLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS----AHSLAW 659
           P  S +LYLS A+L++VP+ L++ WK +I +H     L   V T  + P+    A SL  
Sbjct: 386 PEQSDKLYLSCASLVIVPTNLLEQWKDEITKHT--PYLRTLVLTKARVPTPIPNALSL-L 442

Query: 660 DYDVVITTFNRLSAEWGRRKK---------SPMMQVHWLRVMLDEGHTLGSSL--NLTNK 708
            YD+++ + +R       R K         SP+ QVH+ R+++DEGH LG S     +N 
Sbjct: 443 QYDIILVSMSRFERLIENRIKDRHGSWVLLSPLGQVHFKRIIIDEGHALGHSTLAKKSNL 502

Query: 709 LQMAISLTASNRWLLTGTPT 728
           L +   L  S RW++TGTP+
Sbjct: 503 LLVVEHLQTSARWVVTGTPS 522



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 59/101 (58%), Gaps = 7/101 (6%)

Query: 1025 MHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRA 1083
            + +  + + +  F   +    +LMD   A+ GL+++  +R++ + P+ +  +E Q I RA
Sbjct: 937  LKAERRAQYVATFNETSKFRVMLMDLKQAAFGLNMNSASRIYFVNPVLNPQVEAQAIGRA 996

Query: 1084 HRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRLLKEE 1124
             R+G ++ + VETL +RGT+EE ++E      R +++ +EE
Sbjct: 997  RRIGQSKDVTVETLVLRGTLEELIVE------RKKKMTQEE 1031


>gi|116202151|ref|XP_001226887.1| hypothetical protein CHGG_08960 [Chaetomium globosum CBS 148.51]
 gi|88177478|gb|EAQ84946.1| hypothetical protein CHGG_08960 [Chaetomium globosum CBS 148.51]
          Length = 890

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 17/191 (8%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + +ATL+V P  L+  W+ +I++ V +  +L + V    ++     +   YDVVITT+  
Sbjct: 161 VKKATLVVAPLALIRQWEAEIKEKVTKDHELRVCVHHGPQRTKDPKMLAKYDVVITTYQI 220

Query: 671 LSAEWGRRKKSPMMQ-------VHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWL 722
           L +E G     P          +HW RV+LDE H++    N   K   A  +L +  RW 
Sbjct: 221 LVSEHGNSHSDPTRSPQVGCFGIHWFRVILDEAHSIK---NRNAKATKACCALRSEYRWC 277

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           LTGTP  N     L  LQ ++ FL    Y  +   W   I  P ++       R L  L 
Sbjct: 278 LTGTPMQNN----LDELQSLVHFLRISPY-DDLAEWRAKIDGPLKSGKGHIAIRRLHTLL 332

Query: 783 RCMISARKTDL 793
           +C +  R  D+
Sbjct: 333 QCFMKRRTKDI 343



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 5/135 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVA-GIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            K I+FSQF   + ++E  L    G+K       M +  +  +L   R D     LL    
Sbjct: 687  KFIVFSQFTSMLDLVEPFLRAQPGLKAVRYDGKMPNDAREAALRALRTDPHTRILLCSLK 746

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +  TVE ++L  
Sbjct: 747  CGSLGLNLTAATRVVIVEPFWNPFVEEQAIDRVHRLTQTVDVVVYKLTVADTVEARILAL 806

Query: 1111 LQDTDRCRRLLKEEL 1125
                D+ RRL +  L
Sbjct: 807  ---QDKKRRLAEATL 818


>gi|340520979|gb|EGR51214.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1113

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 74/126 (58%), Gaps = 9/126 (7%)

Query: 609 RLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVI--- 665
           ++YLS+A++++VP+ LV  WK +IQ+H     L + V     +  +      YD+++   
Sbjct: 382 KIYLSQASVVIVPNNLVAQWKQEIQKHTE--GLKVLVLGRQTETPSRKEILTYDILLFSQ 439

Query: 666 TTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTA---SNRWL 722
           T F  L  ++G  +K+    +H+ R ++DEGH LG+S  ++N+  + I L     S+RW+
Sbjct: 440 TRFEMLQKQFGGMEKTVFSSIHFKRCIVDEGHKLGNS-RMSNRSNLLIGLDLMHFSSRWI 498

Query: 723 LTGTPT 728
           +TGTP+
Sbjct: 499 VTGTPS 504



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K+I+F +       +   L V  I++      + +  + + ++ F H+     LLMD S
Sbjct: 876  EKIIVFYENENVAWYLASMLDVLQIQYLIYAKSLKTERRAQYVNTFNHNERFRVLLMDLS 935

Query: 1052 -ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             A+ GLD+   +R++ + P+ +  +E Q I R  R+   +P+ VETL ++ +++E +LE 
Sbjct: 936  QAAFGLDMREASRIYFINPVLNPQVEAQAIGRVRRISQKKPVWVETLVLKNSLDEIILER 995

Query: 1111 LQD 1113
             +D
Sbjct: 996  KRD 998



 Score = 47.8 bits (112), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 9/110 (8%)

Query: 155 LAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLRHPLYIDLATEDGFYFYVNTVSGDIA 214
           L  S +P +K +L+ +Q+ +   ML +E        P  + L    G  +Y+     D A
Sbjct: 198 LMESTVPGLKTELYLYQRRSAALMLQKEAQPGQNLDPRLLHLKDTRGSSWYM-----DPA 252

Query: 215 TGTA---PTMRD-FHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVK 260
           TGT    P   D   GG+  +E G GKT+  L+LIL T      PPD  K
Sbjct: 253 TGTVLLEPRYYDAVSGGILAEEMGSGKTVICLALILATMHLPTSPPDFYK 302


>gi|171059597|ref|YP_001791946.1| non-specific serine/threonine protein kinase [Leptothrix cholodnii
            SP-6]
 gi|170777042|gb|ACB35181.1| Non-specific serine/threonine protein kinase [Leptothrix cholodnii
            SP-6]
          Length = 1449

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 77/140 (55%), Gaps = 4/140 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++ + ++ + L  AG+++  +     S+ + + +  F+       L+   + 
Sbjct: 1296 KALVFSQFVDFLALLREPLDAAGLRYQYLDGSTPSAERTRRVAAFQAGEGDFFLISLKAG 1355

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
              GL+L+    V + +P W+ + E+Q   RAHR+G  RP+ V  L  +GT+EE+++    
Sbjct: 1356 GFGLNLTVADYVVIADPWWNPAAEDQASGRAHRIGQQRPVTVYRLVNKGTLEEKIVALHA 1415

Query: 1113 DTDRCRRLLKEELVKPEREG 1132
            D    +R L + +++ +R+G
Sbjct: 1416 D----KRELADSVLEADRDG 1431


>gi|56611125|gb|AAH87733.1| Transcription termination factor, RNA polymerase II [Mus musculus]
          Length = 1138

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 29/156 (18%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           ++ S  TLIV P+ L+ HWK ++++ V   +L ++++    +     +   YD+VITT++
Sbjct: 614 VFTSSGTLIVCPASLIHHWKNEVEKRVTSNRLRIYLYHGPNRSRHAKVLSTYDIVITTYS 673

Query: 670 RLSAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAI 713
            L+ E    K+               +P++QV W R++LDE H      N+ N ++Q +I
Sbjct: 674 LLAKEIPTTKQEGEVPGANLSVEGTSAPLLQVVWARIILDEAH------NVKNPRVQTSI 727

Query: 714 S---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           +   L A  RW +TGTP  N     L  +  ++KFL
Sbjct: 728 AVCKLQAQARWAVTGTPIQNN----LLDMYSLMKFL 759



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-S 1051
            K +I SQ+   + V+   L    + +A +   ++   ++  ++ F H      +L+   +
Sbjct: 987  KSVIVSQWTSMLQVVALHLKKNRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLA 1046

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+    +FL++  W+ S+E+Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1047 GGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQKKDVVIHRFVCEGTVEEKILQL 1105


>gi|407923454|gb|EKG16525.1| SNF2-related protein [Macrophomina phaseolina MS6]
          Length = 976

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +IE  L    I F      M    +   L  F +    + LL+   A
Sbjct: 826  KSVVFSQFTSFLDLIEPALARDNIPFVRFDGTMSQKARATVLQEFTNRPKGVVLLLSLRA 885

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+   RVF+M+P W  ++E Q I R HRMG +  + V+   +RG++EE+ML+ 
Sbjct: 886  GGVGLNLTAARRVFMMDPWWSFAVEAQAIDRVHRMGQSNEVIVKRFVVRGSIEEKMLKI 944



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--------------PSAHSLAWDY 661
           TL+V P  L+  W+++ ++  + G L++ V+   +K               + + +   Y
Sbjct: 388 TLVVAPMSLLAQWQSEAEKASKSGTLNVMVYYGSEKTVNLQRLCCEANAASAPNVIITSY 447

Query: 662 DVVITTFNRLSAEWGRR-KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
             V++ FN+++   G R     +  V + RV+LDE H + +  + T K      L+A +R
Sbjct: 448 GTVLSEFNQVAGMEGNRGSHGGLFSVEYFRVILDEAHYIKNRQSKTAK--ACYELSARHR 505

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W+LTGTP  N    +L  L  ++ FL  E +  N   W   I  PFE+        ++Q 
Sbjct: 506 WVLTGTPIVN----RLEDLFSLVHFLRVEPWS-NFSFWKTFITVPFESGDFIRALDVVQT 560

Query: 781 LHRCMISARKTDLQT------IPLCIK--EVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R  D++T      +PL  +  EV  +  ++     Y+ +    +R       
Sbjct: 561 VLEPLVMRRTKDMKTPNGEALVPLPPRKIEVESIELSKAEKEVYDWIYTRAKRTF----- 615

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
              ++VE+    K +      I  LR SCC
Sbjct: 616 --AANVEAGTLMKSYTTIFAQILRLRQSCC 643



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 18/99 (18%)

Query: 165 LKLFPHQQAAVEWMLHREWN-----AEVLRHPLYIDLA-----TEDGFY--------FYV 206
           + L  +Q+ A+ WM+ +E +      E+  HPL+ +        +D           FYV
Sbjct: 252 MDLRKYQRQALHWMISKEKDEKSDHKEMSMHPLWEEYTWPAKDVDDNPLPEVPGQPAFYV 311

Query: 207 NTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           N  SG+++       ++  GG+  DE GLGKTI  LSLI
Sbjct: 312 NPYSGELSLDFPMQEQNCLGGILADEMGLGKTIEMLSLI 350


>gi|357403678|ref|YP_004915602.1| Non-specific serine/threonine protein kinase [Methylomicrobium
            alcaliphilum 20Z]
 gi|351716343|emb|CCE22003.1| Non-specific serine/threonine protein kinase [Methylomicrobium
            alcaliphilum 20Z]
          Length = 1412

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 66/116 (56%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++H+ +I+  +   GI +  +     +  + K +D F+     L L+   + 
Sbjct: 1261 KALVFSQFVDHLQLIKDYIEQRGIGYQYLDGSTQAKERKKCVDAFQRGDGELFLISLKAG 1320

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             +GL+L+    V  M+P W+ ++E+Q   RAHRMG  RP+ +  +  + T+EE+++
Sbjct: 1321 GVGLNLTAADYVIHMDPWWNPAVEDQASDRAHRMGQQRPVTIYRMIAKNTIEEKIV 1376



 Score = 41.6 bits (96), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 41/277 (14%)

Query: 599  LALCEPLDSVRLYLSRA----TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA 654
            + L + + ++ L + +A    +LI+ P+ +  +W+++ ++        LF   D ++   
Sbjct: 981  MGLGKTIQALALLVDKAPNGPSLIIAPTSVCMNWESEARRFAPTLNPILFGSGDRQR-KL 1039

Query: 655  HSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
             SL   +D++I ++  L  E   +    + ++ +   +LDE   + +    T + Q A++
Sbjct: 1040 DSLG-SFDLLICSYGLLQQE---QAAEMLSKIPFQIAILDEAQAIKNIA--TRRSQGAMN 1093

Query: 715  LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYG---QNQKAWDGGILRPFEAEME 771
            L A  R ++TGTP  N     L  L  + +F++    G   Q  K + G I R      +
Sbjct: 1094 LQAEFRVIMTGTPLEN----HLGELWNLFRFINPGLLGSLEQFNKRFAGPIERD---RSQ 1146

Query: 772  EGRSRLLQLLHRCMISARKTD-LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL-- 828
            E R +L +L+   ++   KT  LQ +P   +   ++  + E    Y  L    RR  L  
Sbjct: 1147 EARQQLKKLIQPFILRRTKTQVLQELPPKTEIPVYVEMSGEEMAFYEAL----RRESLEI 1202

Query: 829  ---MADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
                       H++ L            I  LR SCC
Sbjct: 1203 LNSTGSQAGAKHLQIL----------AAITKLRRSCC 1229


>gi|317126472|ref|YP_004100584.1| SNF2-related protein [Intrasporangium calvum DSM 43043]
 gi|315590560|gb|ADU49857.1| SNF2-related protein [Intrasporangium calvum DSM 43043]
          Length = 1147

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 8/143 (5%)

Query: 974  FLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKS 1033
            FL + L     E ++AL     +FSQF   + V+E  L  AG++ A  Y    ++++   
Sbjct: 984  FLVEQLRELAAEGHRAL-----VFSQFTGFLRVVEGALAAAGLRTA--YLDGSTTDRPSV 1036

Query: 1034 LDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIH 1093
            +  FRH  +   L+   +   GL L+    VF+++P W+ + E Q I RAHR+G  +P+ 
Sbjct: 1037 IRGFRHGDATAFLISLKAGGFGLTLTEADYVFVLDPWWNPAAEAQAIDRAHRIGQDKPVT 1096

Query: 1094 VETLAMRGTVEEQMLEFLQDTDR 1116
            V  L   GT+EE+++  LQ+  R
Sbjct: 1097 VYRLVSAGTIEEKVVA-LQERKR 1118


>gi|452843968|gb|EME45902.1| hypothetical protein DOTSEDRAFT_70055 [Dothistroma septosporum
           NZE10]
          Length = 1256

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 29/191 (15%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLA--WDYDVVITTFNRL 671
           + TLIV P  L+  WK +IQ  ++PG+  L V+T H +  A S      YDVV+TT+  L
Sbjct: 541 KTTLIVAPVALMRQWKQEIQNRLKPGRFQLTVFTHHGQKKAKSFNDLRAYDVVLTTYGSL 600

Query: 672 SAEWGRRKKSPMMQ--------------------VHWLRVMLDEGHTLGSSLNLTNKLQM 711
           ++E  + +K  + Q                      W R++LDE   + +    T+K   
Sbjct: 601 ASELKKMEKFRLRQRADPGARPYPAERCVFLDPDARWYRIILDEAQCIKNRTTQTSK--A 658

Query: 712 AISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEME 771
           A  + A+ R+ +TGTP  N     +     +LKFL  + Y Q ++ +   I  P  ++ E
Sbjct: 659 ACMINATYRFCVTGTPMMNN----VEEFYSLLKFLRVKPYCQWER-FRLDINMPLRSQNE 713

Query: 772 EGRSRLLQLLH 782
           + R++ +++L 
Sbjct: 714 DFRNKAMRMLQ 724



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 77/136 (56%), Gaps = 5/136 (3%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG- 1050
            ++V+IFSQ+   + ++E  +  AGI +      M ++ +  ++D FR     + +++   
Sbjct: 1086 EQVLIFSQWTSLLDLLEVPIDEAGIGYRRYDGSMSAAMRGDAVDDFRDQRKNVRVMLVSL 1145

Query: 1051 -SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             + + GL+L+  ++V +++P W+  +EEQ I RAHR+G  R + V  + +  TVE++++ 
Sbjct: 1146 KAGNAGLNLNMASQVIILDPFWNPYIEEQAIDRAHRLGQRREVKVHRILIENTVEDRIIA 1205

Query: 1110 FLQDTDRCRRLLKEEL 1125
                 ++ R L+ E L
Sbjct: 1206 L---QEKKRALISEAL 1218


>gi|254692909|ref|NP_001013044.2| transcription termination factor 2 [Mus musculus]
 gi|152031718|sp|Q5NC05.2|TTF2_MOUSE RecName: Full=Transcription termination factor 2; AltName: Full=RNA
           polymerase II termination factor; AltName:
           Full=Transcription release factor 2
 gi|66911227|gb|AAH96625.1| Transcription termination factor, RNA polymerase II [Mus musculus]
          Length = 1138

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 29/156 (18%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           ++ S  TLIV P+ L+ HWK ++++ V   +L ++++    +     +   YD+VITT++
Sbjct: 614 VFTSSGTLIVCPASLIHHWKNEVEKRVTSNRLRIYLYHGPNRSRHAKVLSTYDIVITTYS 673

Query: 670 RLSAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAI 713
            L+ E    K+               +P++QV W R++LDE H      N+ N ++Q +I
Sbjct: 674 LLAKEIPTTKQEGEVPGANLSVEGTSAPLLQVVWARIILDEAH------NVKNPRVQTSI 727

Query: 714 S---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           +   L A  RW +TGTP  N     L  +  ++KFL
Sbjct: 728 AVCKLQAQARWAVTGTPIQNN----LLDMYSLMKFL 759



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-S 1051
            K +I SQ+   + V+   L    + +A +   ++   ++  ++ F H      +L+   +
Sbjct: 987  KSVIVSQWTSMLQVVALHLKKNRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLA 1046

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+    +FL++  W+ S+E+Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1047 GGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQKKDVVIHRFVCEGTVEEKILQL 1105


>gi|297848774|ref|XP_002892268.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338110|gb|EFH68527.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
          Length = 843

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K I+FSQF   + +I   L   G+    +   M  + +  +++ F+ D  C   LM   A
Sbjct: 692  KAIVFSQFTSFLDIINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKA 751

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              + L+L+  + VF+M+P W+ ++E Q   R HR+G  +PI V    +  TVEE++L  
Sbjct: 752  GGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRL 810



 Score = 45.1 bits (105), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 678 RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLS 737
           R+KS +  V W R++LDE H +      +N  +   +L A+ RW L+GTP  N    ++ 
Sbjct: 354 REKSLLHSVKWNRIILDEAHYIKE--RRSNTARAVFALEATYRWALSGTPLQN----RVG 407

Query: 738 HLQPMLKFLHEEAYG 752
            L  +++FL    Y 
Sbjct: 408 ELYSLIRFLQIRPYS 422



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 14/129 (10%)

Query: 573 RVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSR-------------ATLIV 619
           R +K    W   K   ++A  + A  + + + + ++ L L+R              TL++
Sbjct: 151 RYQKEFLAWA-SKQEQSVAGGILADEMGMGKTIQAISLVLARREVDRAQFGEAVGCTLVL 209

Query: 620 VPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRK 679
            P   V  W  +I +   PG   + V+   K+        +YD V+TT++ + +E+ R  
Sbjct: 210 CPLVAVSQWLNEIARFTSPGSTKVLVYHGVKREKNIKEFMNYDFVLTTYSTVESEYRRHI 269

Query: 680 KSPMMQVHW 688
             P +Q  +
Sbjct: 270 MPPRVQCAY 278


>gi|46128445|ref|XP_388776.1| hypothetical protein FG08600.1 [Gibberella zeae PH-1]
          Length = 2462

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 2/131 (1%)

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
            N+    K I+FSQF   ++++E        +F      M +  + +SL   R D     L
Sbjct: 2256 NEVKEHKFIVFSQFTSMLNLVEPFFRKERFRFVRYDGSMKNDEREESLRSLRSDPETRIL 2315

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            L      SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + +  L +  TVEE
Sbjct: 2316 LCSLKCGSLGLNLTAATRVVILEPFWNPFVEEQAIDRVHRLTQTVDVIIYKLTVSNTVEE 2375

Query: 1106 QMLEFLQDTDR 1116
            ++LE LQD  R
Sbjct: 2376 RILE-LQDKKR 2385



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 107/251 (42%), Gaps = 37/251 (14%)

Query: 612  LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTF 668
            + + TL+V P  L+  W+ +I   V   + H      H  P+      D   YDVVITT+
Sbjct: 1663 IEKTTLVVAPLALIRQWEHEINDRVE--KSHGLKVCVHHGPNRTKRFKDLAAYDVVITTY 1720

Query: 669  NRLSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
              L +E G         K+    +HW RV+LDE HT+ +    T   +   +L +  RW 
Sbjct: 1721 QILVSEHGNSSDAENGLKAGCFGLHWWRVVLDEAHTVKN--RNTKATKACYALNSEYRWC 1778

Query: 723  LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
            L+GTP  N     L  LQ ++KFL    Y  N K W   I  P +        R L  L 
Sbjct: 1779 LSGTPMQNN----LDELQSLIKFLRIRPY-DNLKEWKEHIDLPLKNGRGHIAIRRLHSLL 1833

Query: 783  RCMISARKTDLQTIPLCIKEVTFLN----FTEEHAGTYNELVVTVRRNILMADWNDPSHV 838
            RC +  R  ++      +KE   LN     + +  G+     VT R+ + +A        
Sbjct: 1834 RCFMKRRTKEI------LKEDGALNPGGKPSAKGEGSSTGFKVTERKVVTVA-------- 1879

Query: 839  ESLLNPKQWKF 849
             + L+P + KF
Sbjct: 1880 -AELSPAERKF 1889


>gi|148675685|gb|EDL07632.1| transcription termination factor, RNA polymerase II [Mus musculus]
          Length = 1138

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 29/156 (18%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           ++ S  TLIV P+ L+ HWK ++++ V   +L ++++    +     +   YD+VITT++
Sbjct: 614 VFTSSGTLIVCPASLIHHWKNEVEKRVTSNRLRIYLYHGPNRSRHAKVLSTYDIVITTYS 673

Query: 670 RLSAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAI 713
            L+ E    K+               +P++QV W R++LDE H      N+ N ++Q +I
Sbjct: 674 LLAKEIPTTKQEGEVPGANLSVEGTSAPLLQVVWARIILDEAH------NVKNPRVQTSI 727

Query: 714 S---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           +   L A  RW +TGTP  N     L  +  ++KFL
Sbjct: 728 AVCKLQAQARWAVTGTPIQNN----LLDMYSLMKFL 759



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-S 1051
            K +I SQ+   + V+   L    + +A +   ++   ++  ++ F H      +L+   +
Sbjct: 987  KSVIVSQWTSMLQVVALHLKKNRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLA 1046

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+    +FL++  W+ S+E+Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1047 GGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQKKDVVIHRFVCEGTVEEKILQL 1105


>gi|259479572|tpe|CBF69917.1| TPA: single-stranded DNA-dependent ATPase (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 1170

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 21/210 (10%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF---- 668
           ++ TL+V P   V++W +Q+++H+R G L  +V+    + ++      YD+VITT+    
Sbjct: 583 TKTTLLVAPLSTVNNWVSQVKEHLRDGALTSYVFHGSSRTTSVDELSKYDLVITTYSIVL 642

Query: 669 NRLSAEWGRRK-KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
           + LS    RR   SP+ +++  R++LDE HT+        + Q    L A  RW +TGTP
Sbjct: 643 SELSGRGSRRAGSSPLTKMNMFRIVLDEAHTIRE--QSAAQTQAIFRLNAQRRWSVTGTP 700

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMIS 787
             N    +L  L  + KFL    Y  ++  ++  IL  F+     G + +L  L R ++ 
Sbjct: 701 IQN----RLDDLLSVTKFLGIYPY-DDRSRFNMHILSRFKT----GDATVLASL-RVLVD 750

Query: 788 A----RKTDLQTIPLCIKEVTFLNFTEEHA 813
           +    R  D   +P    ++  L F+E  A
Sbjct: 751 SFTLRRVKDKIDLPARHDKIVMLEFSESEA 780



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 10/157 (6%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            P K ++FS +  H+ +IE  L   G+  +  +   M    + K+LD FR D +   LL  
Sbjct: 1014 PIKSVVFSAWTSHLDLIEIALRDQGLTGYTRLDGTMSLPARNKALDNFRDDNNTTILLAT 1073

Query: 1050 -GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
             G+  +GL+L+  + V++MEP ++ +   Q I R HR+G TR +      M+ ++EE++ 
Sbjct: 1074 IGAGGVGLNLTAASHVYIMEPQYNPAAVAQAIDRVHRLGQTREVTTVQFIMKDSIEEKIA 1133

Query: 1109 EF------LQDTDRCRRLLKEELVKPEREGARSHRTL 1139
            E       L D    R  L +  V+ +R   R +R+L
Sbjct: 1134 ELAKKKQQLADMSLNRGKLDKAEVQEQR--MREYRSL 1168


>gi|121716002|ref|XP_001275610.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1]
 gi|119403767|gb|EAW14184.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1]
          Length = 1179

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 10/138 (7%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTF---- 668
           ++ TL+VVP   V++W TQI++H++ G +  +V+    + +       YD+VITT+    
Sbjct: 599 TKTTLLVVPLSTVNNWVTQIKEHLKEGAISYYVFHGSSRTTDVDELSSYDLVITTYSIVL 658

Query: 669 NRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
           + LS +  +R  SP+ +++  R++LDE HT+        + Q    L +  RW +TGTP 
Sbjct: 659 SELSRKSSKRGVSPLTKMNLFRIVLDEAHTIRE--QSAAQTQAIFKLNSERRWSVTGTPI 716

Query: 729 PNTPNSQLSHLQPMLKFL 746
            N    +L  L  + KFL
Sbjct: 717 QN----RLEDLLSVTKFL 730



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)

Query: 990  LPDKVIIFSQFLEHIHVIEQQLTVAGIK-FAGMYSPMHSSNKIKSLDMFRHDASCLALLM 1048
            LP K ++FS +  H+ +IE  L   GI  +  +   M    + ++L+ F  +     LL 
Sbjct: 1022 LPIKSVVFSAWTSHLDLIEIALKDNGITGYTRLDGSMTLPARNRALEDFHSNNETTILLA 1081

Query: 1049 D-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
              G+  +GL+L+  ++V++MEP ++ +   Q I R HR+G TR +      M+G++EE++
Sbjct: 1082 TIGAGGVGLNLTSASKVYIMEPQYNPAAVAQAIDRVHRLGQTRDVTTVQFIMKGSIEEKI 1141

Query: 1108 LEF------LQDTDRCRRLLKEELVKPEREGARSHRTL 1139
             E       L D    R  L ++ V+  R   R +R+L
Sbjct: 1142 FELAKRKQQLADMSMNRGKLDKKDVQEHR--MREYRSL 1177


>gi|443474700|ref|ZP_21064671.1| SNF2-related protein [Pseudanabaena biceps PCC 7429]
 gi|443020590|gb|ELS34535.1| SNF2-related protein [Pseudanabaena biceps PCC 7429]
          Length = 1444

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 67/118 (56%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++H+H+I   L    I +  +     + ++ K ++ F+     + L+   + 
Sbjct: 1294 KALVFSQFVDHLHLIRDYLDAQKISYQYLDGSTPAKDRKKRVEAFQAGEGDVFLISLKAG 1353

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+    V  M+P W+ ++E+Q   RAHR+G  RP+ +  L  +GT+EE++++ 
Sbjct: 1354 GTGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQKRPVTIYRLVAKGTIEEKIVDL 1411


>gi|367038639|ref|XP_003649700.1| hypothetical protein THITE_2153153 [Thielavia terrestris NRRL 8126]
 gi|346996961|gb|AEO63364.1| hypothetical protein THITE_2153153 [Thielavia terrestris NRRL 8126]
          Length = 1488

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 121/272 (44%), Gaps = 43/272 (15%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHV-------RPGQLHLFVWTDHKKPSAHSLAWDYDVVITT 667
           ATLIV PS L+D W +++ +H         PG   L    +  + SA  LA + DVVITT
Sbjct: 391 ATLIVAPSTLLDQWLSELNRHAPSLKVMFYPGIRKLSKSKEGTEISAEQLA-EQDVVITT 449

Query: 668 FNRLSAE-W------GR---------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQM 711
           +  L  E W      GR         R +SP++Q+ W RV +DE   + +  N  N  ++
Sbjct: 450 YEVLRTEIWAASDAPGRSMRNEQQYERLRSPLVQLSWWRVCIDEAQMVENWTN--NAAKL 507

Query: 712 AISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAW------DGGILRP 765
           A  +   N W +TGTP  +     L  L   L FL  E Y  + K W      D    R 
Sbjct: 508 ARMIPRINAWGVTGTPVKDDIQKDLRGL---LLFLRYEPYASDTKIWNVLTTVDKASFRK 564

Query: 766 FEAEMEEGRSRLLQLLHRCMISARKTDLQTIPL-CIKEVTFLNFTEEHAGTYNELVVTVR 824
              ++    S+ L +     I A+K  + ++P   ++E  +    EE A T     +  R
Sbjct: 565 IFNQISMRHSKSL-VRSEIAIPAQKRFVVSMPFTAVEEQHYQTLFEELAETCG---LDAR 620

Query: 825 RNILMADWN--DPSHVESLLNPKQWKFRSTTI 854
            N L ADW+  DP+ V+S +     + R T +
Sbjct: 621 GNPLQADWDPEDPT-VQSAMRVALDRLRQTVL 651



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 21/108 (19%)

Query: 160 MPCMKLKLFPHQQAAVEWMLHRE---WN---------------AEVLRHPLYIDLATE-D 200
           +P ++ KL+P Q+ AV+W+L RE   W+               +  L  P+    A + D
Sbjct: 259 IPKLEAKLYPFQRRAVQWLLRREGVQWHPGSPGEEAGVQPYVPSASLEPPISFSPAKDAD 318

Query: 201 GFYFYVNTVSGDIATGTA--PTMRDFHGGMFCDEPGLGKTITALSLIL 246
           G   Y++ + G +        ++ DF GG+  +E GLGKT+  ++LIL
Sbjct: 319 GNTVYLSPLLGLVTRNPTFFSSLHDFRGGILAEEMGLGKTLEVIALIL 366



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K I+FSQ+ E + ++ Q      I F        S +    +  F+ +A     L+   A
Sbjct: 1270 KSIVFSQYKEFLDILAQAFRRYRIGFT-------SFDNAHGVAQFKEEAGIEVFLLHARA 1322

Query: 1053 -SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
             + GL+L   + VFL EP+ + ++E Q I+R  R+G      V    + GTVEE + + 
Sbjct: 1323 HASGLNLVNASHVFLCEPLLNTALELQAIARVDRIGQQHETTVWLYIVDGTVEESIYDL 1381


>gi|269955093|ref|YP_003324882.1| Non-specific serine/threonine protein kinase [Xylanimonas
            cellulosilytica DSM 15894]
 gi|269303774|gb|ACZ29324.1| Non-specific serine/threonine protein kinase [Xylanimonas
            cellulosilytica DSM 15894]
          Length = 1102

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 2/118 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            + ++FSQF  ++ ++  +L   G++FA  Y    +  +   +  FR   + L L+   + 
Sbjct: 951  RALVFSQFTGYLSLVAARLDALGLRFA--YLDGSTRRRADVVRGFREGDAPLFLISLKAG 1008

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+    VFL++P W+ + E Q + R HR+G TRP++V  +   GT+EE+++  
Sbjct: 1009 GFGLNLTEADHVFLLDPWWNPATEAQAVDRTHRIGQTRPVNVVRMVAAGTIEEKVMAL 1066


>gi|451946092|ref|YP_007466687.1| DNA/RNA helicase, superfamily II, SNF2 family [Desulfocapsa
            sulfexigens DSM 10523]
 gi|451905440|gb|AGF77034.1| DNA/RNA helicase, superfamily II, SNF2 family [Desulfocapsa
            sulfexigens DSM 10523]
          Length = 1390

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 68/121 (56%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K +IFSQF+ H+ ++ + L   GI +  +     S  + + ++ F+     L L+   + 
Sbjct: 1240 KALIFSQFIGHLTILREHLDAKGINYRYLDGSTSSPKRKQEVERFQAGEGDLFLISLKAG 1299

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
             LGL+L+    V  M+P W+ ++E+Q   RAHR+G  RP+ +  L  + T+EE++++  Q
Sbjct: 1300 GLGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQKRPVTIYRLVCKNTIEEKIVKLHQ 1359

Query: 1113 D 1113
            +
Sbjct: 1360 E 1360



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 117/274 (42%), Gaps = 38/274 (13%)

Query: 599  LALCEPLDSVRLYLSRAT----LIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSA 654
            + L + + ++   LS AT    L+V P+ + ++W+++  +      L++   T   +   
Sbjct: 963  MGLGKTVQALTAMLSLATEGPSLVVAPTSVSNNWQSEANRFT--PTLNIKTLTGKNREET 1020

Query: 655  HSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAIS 714
             +    +D++ITT+  L  E        +  V W  V+LDE   + ++   T + + A++
Sbjct: 1021 IAELGKFDILITTYTLLQQE-----NDLLSAVKWQTVILDEAQAIKNA--ATKRSKAAMA 1073

Query: 715  LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEA-EMEEG 773
            L A  + + TGTP  N     L  L  +  F++    G   + ++     P E     + 
Sbjct: 1074 LQARFKLITTGTPVEN----HLGELWNLFHFINPGLLGSLNR-FNERFAIPIERYHNRDA 1128

Query: 774  RSRLLQLLHRCMISARKTD-LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
            R +L +L+   ++   K+  L+ +P   +    +  +E+    Y  L    R+N L    
Sbjct: 1129 RLKLKKLIRPFILRRIKSQVLEELPPRTEITLDVEMSEDEQHFYEAL----RQNAL---- 1180

Query: 833  NDPSHVESLLNPKQWKFRS----TTIRNLRLSCC 862
                  E L N ++ K R     T I  LR +CC
Sbjct: 1181 ------EVLENNREKKSRHLQILTEIMKLRQACC 1208


>gi|317143698|ref|XP_001819632.2| SWI/SNF family DNA-dependent ATPase Ris1 [Aspergillus oryzae RIB40]
          Length = 1090

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 115/265 (43%), Gaps = 52/265 (19%)

Query: 599 LALCEPLDSVRLYLSRA--------TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHK 650
           + L + + ++ L +SR         TLI+ P  L+  WK +I + ++PG+  L V+  H 
Sbjct: 419 MGLGKTIQAIALMVSRPSTDEERKPTLIIAPVALMQQWKREIGRILKPGRHQLSVYILHG 478

Query: 651 KPSAHSLA--WDYDVVITTFNRLSAEWGRRKKSPMMQ----------------------- 685
           +  A S     +YDVV+TTF  LS+E  RR+K   +Q                       
Sbjct: 479 EKRAVSFRDLKNYDVVLTTFGTLSSELKRREKYDELQSSGANEQTLSREIAKSLPCLGPS 538

Query: 686 VHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLK 744
             W RV++DE   +    N   K  +A   L A+ RW ++GTP  N     +  L  +L+
Sbjct: 539 SKWYRVIIDEAQCIK---NRNTKAALACCRLNATYRWCMSGTPMMNN----VQELHSLLR 591

Query: 745 FLHEEAYGQNQKAWDGGILRPFEA---EMEEGRSRLLQLLHRCMISARKTD-------LQ 794
           FL  + Y  N + ++    RP +      +    R LQ+L + ++  R  D       + 
Sbjct: 592 FLRIKPYS-NLERFNHDFTRPLKGSSVSAQRKAMRQLQVLLKAVLLRRTKDSKIDGKPIL 650

Query: 795 TIPLCIKEVTFLNFTEEHAGTYNEL 819
            +P  I E     F+E+    Y+ L
Sbjct: 651 QLPRRISEKVHAVFSEDELELYSSL 675



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K IIFSQF   + ++E  +   G  +      M   ++  ++  F     C  +L+   
Sbjct: 936  EKTIIFSQFTSLLDLLEVPIVRQGWGYRRYDGSMKPGDRNSAVLDFTDSPDCKIILVSLK 995

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + + GL+L   ++V + +P W+  +EEQ I RAHR+G  R + +  + ++ TVE+++LE 
Sbjct: 996  AGNSGLNLVAASQVIIFDPFWNPYIEEQAIDRAHRIGQVREVQIHRILVQNTVEDRILE- 1054

Query: 1111 LQDTDR 1116
            LQD  R
Sbjct: 1055 LQDKKR 1060


>gi|312922352|ref|NP_001099924.2| transcription termination factor 2 [Rattus norvegicus]
          Length = 1142

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 29/156 (18%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           ++ S  TLIV P+ L+ HWK +I++ V   +L ++++    +     +   YD+VITT++
Sbjct: 618 VFTSTGTLIVCPASLIHHWKNEIEKRVNSNKLRIYLYHGPNRIQHAKVLSTYDIVITTYS 677

Query: 670 RLSAEWGRRK---------------KSPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAI 713
            L+ E    K                +P++QV W R++LDE H      N+ N ++Q +I
Sbjct: 678 LLAKEIPTAKHEGEVPGAKLSVEGISAPLLQVVWARIILDEAH------NVKNPRVQTSI 731

Query: 714 S---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           +   L A  RW +TGTP  N     L  +  ++KFL
Sbjct: 732 AVCKLQAQARWAVTGTPIQNN----LLDMYSLMKFL 763



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-S 1051
            K +I SQ+   + V+   L    + +A +   ++   ++  ++ F H      +L+   +
Sbjct: 991  KSVIVSQWTSMLQVVALHLRKNRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLA 1050

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+    +FL++  W+ S+E+Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1051 GGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQEKDVVMHRFVCEGTVEEKILQL 1109


>gi|311032686|ref|ZP_07710776.1| SWF/SNF family helicase [Bacillus sp. m3-13]
          Length = 1044

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 4/143 (2%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            +V+IFSQF + + +I ++L   G+ +  +     S  +++  + F        L+   + 
Sbjct: 894  RVLIFSQFTKMLELIGRELAYQGLPYFYLDGQTPSEERVERCERFNSGERDFFLISLKAG 953

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
              GL+L+    V L +  W+ ++EEQ   RAHRMG T+ + V  L  RGT+EE+M E LQ
Sbjct: 954  GTGLNLTGADTVILYDLWWNPAVEEQAADRAHRMGQTQTVQVIKLVARGTIEEKMNE-LQ 1012

Query: 1113 DTDRCRRLLKEELVKPEREGARS 1135
            D    +R L EE++ P+   ++S
Sbjct: 1013 DK---KRHLIEEIIDPDERVSKS 1032


>gi|383766815|ref|YP_005445796.1| putative helicase [Phycisphaera mikurensis NBRC 102666]
 gi|381387083|dbj|BAM03899.1| putative helicase [Phycisphaera mikurensis NBRC 102666]
          Length = 1267

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 76/138 (55%), Gaps = 7/138 (5%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K +IFSQF   +H+++++L  A + +   Y    + N+ + +D F+ D    A L+   +
Sbjct: 1119 KALIFSQFTSMLHLVQERLDSADVSYT--YLDGQTRNRRQVVDDFQTDPDLTAFLISLKA 1176

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
               GL+L+    VF+++P W+ ++E Q I RAHR+G  +P+    +    TVE+++LE  
Sbjct: 1177 GGTGLNLTSAEYVFILDPWWNPAVEAQAIDRAHRIGQEKPVFAYRMICEDTVEQRILEL- 1235

Query: 1112 QDTDRCRRLLKEELVKPE 1129
                + +R L E +V  E
Sbjct: 1236 ---QKRKRDLAEAVVGGE 1250



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 13/148 (8%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           + + +LIV P  ++ +W  + ++   PG L +  ++   +  +     DYD+++T+F  +
Sbjct: 801 VGKPSLIVAPRSVIFNWLDEAEKFT-PG-LKVLAYSGPDRAKSRKKLADYDLIVTSFGLM 858

Query: 672 SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
                RR    +  V +  ++LDE   + +  + + K   A +L A +R  LTGTP  N 
Sbjct: 859 -----RRDAEELQHVEFDYIVLDEAQAIKNPSSQSAK--AARTLKADHRLALTGTPVEN- 910

Query: 732 PNSQLSHLQPMLKFLHEEAYGQNQKAWD 759
               L  L  + ++L+    G N +  D
Sbjct: 911 ---HLGDLWSIFEYLNPGMLGSNARFAD 935


>gi|224095220|ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
 gi|222853265|gb|EEE90812.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 923

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 81/153 (52%), Gaps = 4/153 (2%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K I+FSQ+   + ++E  L    I++  +   M  S++ K++  F  D     +LM  
Sbjct: 768  PIKAIVFSQWTSMLDLVEFSLNQHCIQYRRLDGTMTLSSRDKAVKDFNTDPEVTVMLMSL 827

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             + +LGL++     V L++  W+ + E+Q I RAHR+G TRP+ V  L ++ TVE+++L 
Sbjct: 828  KAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRLTIKDTVEDRILA 887

Query: 1110 FLQDTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
                 D  R+++     + +  G+ +  T+ D 
Sbjct: 888  L---QDEKRKMVASAFGEDQSGGSATRLTVEDL 917



 Score = 47.0 bits (110), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 97/259 (37%), Gaps = 69/259 (26%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFN---- 669
            TL+V P+ ++  W  ++   V  G +L + ++    +  +      +DVV+TT++    
Sbjct: 311 GTLVVCPASVLRQWARELDDKVADGAKLSVLIYHGGNRTRSPDELAKHDVVLTTYSIVTN 370

Query: 670 ---------------------RLSAEWGRRKK-------------------------SPM 683
                                 LS+E+   KK                           +
Sbjct: 371 EVPKQPLVDEDEADDKNGEKHGLSSEFSNNKKRKKTSKVSKKRGRKGMDSSSIDCDFGAL 430

Query: 684 MQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPML 743
            +V W RV+LDE  T+ +  + T   +   SL A  RW L+GTP  N+    +  L    
Sbjct: 431 ARVSWSRVILDEAQTIKN--HRTQVARACCSLRAKRRWCLSGTPIQNS----IDDLYSYF 484

Query: 744 KFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKT---DLQTI---- 796
           +FL  + Y    K++   I  P       G  +L  +L   M+   K    D Q I    
Sbjct: 485 RFLRYDPYAV-YKSFYNTIKVPISRNSLHGYKKLQAVLRAIMLRRTKATLIDGQPIINLP 543

Query: 797 --PLCIKEVTFLNFTEEHA 813
              +C+ +V F   TEE A
Sbjct: 544 PKSICLTKVDF--STEERA 560


>gi|385304378|gb|EIF48398.1| snf2 family [Dekkera bruxellensis AWRI1499]
          Length = 162

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 9/132 (6%)

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSP-----MHSSNKIK--SLDM 1036
            L  N+   +K I+F +F    + + + L + GI +  +YSP       S N I     D+
Sbjct: 21   LVENEIKGEKSIVFYEFENSAYYLTELLDILGISYF-LYSPHIPPVQRSQNLIDFDEWDI 79

Query: 1037 FRHDASCLALLMDGS-ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
             +H    +AL+MD   A+ GL +   T VF + P+W++S+E Q I RAHR+G    + VE
Sbjct: 80   QKHSGHGVALVMDLKLAAHGLTILSATNVFFINPVWNKSVEAQAIKRAHRIGQKHEVFVE 139

Query: 1096 TLAMRGTVEEQM 1107
            TL +  T+EE+M
Sbjct: 140  TLILEDTIEEEM 151


>gi|408392594|gb|EKJ71946.1| hypothetical protein FPSE_07882 [Fusarium pseudograminearum CS3096]
          Length = 1039

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 2/131 (1%)

Query: 987  NKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
            N+    K I+FSQF   ++++E        +F      M +  + +SL   R D     L
Sbjct: 833  NEVKEHKFIVFSQFTSMLNLVEPFFRKERFRFVRYDGSMKNDEREESLRSLRSDPETRIL 892

Query: 1047 LMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
            L      SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + +  L +  TVEE
Sbjct: 893  LCSLKCGSLGLNLTAATRVVILEPFWNPFVEEQAIDRVHRLTQTVDVIIYKLTVSNTVEE 952

Query: 1106 QMLEFLQDTDR 1116
            ++LE LQD  R
Sbjct: 953  RILE-LQDKKR 962



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 84/192 (43%), Gaps = 20/192 (10%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTF 668
           + + TL+V P  L+  W+ +I   V   + H      H  P+      D   YDVVITT+
Sbjct: 239 IEKTTLVVAPLALIRQWEHEINDRVE--KSHGLKVCVHHGPNRTKRFKDLAAYDVVITTY 296

Query: 669 NRLSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA-ISLTASNRW 721
             L +E G         K+    +HW RV+LDE HT+    N   K   A  +L +  RW
Sbjct: 297 QILVSEHGNSSDAENGLKAGCFGLHWWRVVLDEAHTVK---NRNAKATKACYALNSEYRW 353

Query: 722 LLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLL 781
            L+GTP  N     L  LQ ++KFL    Y  N K W   I  P +        R L  L
Sbjct: 354 CLSGTPMQNN----LDELQSLIKFLRIRPY-DNLKEWKEHIDLPLKNGRGHIAIRRLHSL 408

Query: 782 HRCMISARKTDL 793
            RC +  R  ++
Sbjct: 409 LRCFMKRRTKEI 420


>gi|351705134|gb|EHB08053.1| Transcription termination factor 2 [Heterocephalus glaber]
          Length = 1148

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 23/150 (15%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S  TLIV P+ L+ HWK ++++ V   +L L ++    +     +   YD+VITT++ L+
Sbjct: 627 SHGTLIVCPASLIHHWKNEVEKRVNSNKLRLCLYHGPNRNRHAKVLSTYDIVITTYSLLA 686

Query: 673 AEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLT 716
            E   +K+               +P++Q+ W RV+LDE H +    N   +  MA+  L 
Sbjct: 687 KEIPTKKQEEEVLGADLGVEGFSTPLLQIVWARVILDEAHNVK---NPRVQTSMAVCKLQ 743

Query: 717 ASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           A  RW +TGTP  N     L  +  +LKFL
Sbjct: 744 AHARWAVTGTPIQNN----LLDMYSLLKFL 769



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 61/119 (51%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-S 1051
            K ++ SQ+   + V+   L   G+ +A +   ++   ++  ++ F H      +L+   +
Sbjct: 997  KSVVVSQWTSMLRVVALHLKKHGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLA 1056

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+    +FL++  W+ S+E+Q   R +R+G  + + +       TVEE++L+ 
Sbjct: 1057 GGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFICERTVEEKILQL 1115


>gi|428182435|gb|EKX51296.1| hypothetical protein GUITHDRAFT_103211 [Guillardia theta CCMP2712]
          Length = 709

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 7/135 (5%)

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQLTVAGI---KFAGMYSPMHSSNKIKSLDMFRHD 1040
            L+++K +  K ++FS FL  +   E  L  AGI   +  G  S +     I+  D +   
Sbjct: 550  LQADKTV--KSVVFSNFLSCLDETESALIAAGIPVFRIDGKTSIVQRRRLIQDFDSYPQG 607

Query: 1041 ASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMR 1100
            A  L LL      +GL L+  +R ++MEP W+ +++EQ + R HR+G TRP+ +     +
Sbjct: 608  A--LLLLSTKVGGVGLSLTMASRAYMMEPWWNAAVDEQAMHRLHRIGQTRPVTIIRYMCQ 665

Query: 1101 GTVEEQMLEFLQDTD 1115
            GT+E++++E  +  D
Sbjct: 666  GTIEQKIMEMQEKKD 680


>gi|154310570|ref|XP_001554616.1| hypothetical protein BC1G_06759 [Botryotinia fuckeliana B05.10]
          Length = 1142

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 1/117 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +IE  L  + I F  +   M    +   L  ++     + LL+   A
Sbjct: 992  KSVVFSQFTSFLSLIEPALARSSIPFLRLDGSMPQKARAAVLARYKDSGEGIVLLLSLRA 1051

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +GL+L+   RVF+M+P W  ++E Q I R HRMG    + V+   ++G+VEE+ML
Sbjct: 1052 GGVGLNLTMAKRVFMMDPWWSFAVEAQAIDRVHRMGQVGEVVVKRFIVKGSVEERML 1108



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--------------PSAHSLAWDY 661
           TL+V P  L+  W+++ +   R G +   V+    K               + + +   Y
Sbjct: 566 TLVVAPMSLLAQWQSEAENASRDGTMKSIVYYGSDKTTNLQALCCEANAASAPNVVITSY 625

Query: 662 DVVITTFNRLSAEWGRRK-KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            V+++ FN+++A  G +     +  + + RV+LDE H + +  + T K    I+  A +R
Sbjct: 626 GVILSEFNQVTARNGDKGGHGGLFSLSFFRVILDEAHYIKNRQSKTAKACYEIA--AEHR 683

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE++       ++Q 
Sbjct: 684 WALTGTPIVN----RLEDLFSLVRFLRVEPWS-NFSFWKTFITIPFESKDFMRALDVVQT 738

Query: 781 LHRCMISARKTDLQT------IPLCIK--EVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R  D++T      +PL  K  ++  +  +E     Y+ +    +R       
Sbjct: 739 VLEPLVLRRTKDMKTPNGEALVPLPKKTIDIVEIELSEPEREVYDHIFTRAKRTF----- 793

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
              +++E+    K +      I  LR SCC
Sbjct: 794 --SANIEAGTVLKAYTSIFAQILRLRQSCC 821



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 22/146 (15%)

Query: 165 LKLFPHQQAAVEWMLHREWN-----AEVLRHPLY---------------IDLATEDGFYF 204
           + L P+Q+ A+ WM+ +E +      E   HPL+               I +A +D FY 
Sbjct: 427 MDLRPYQKQALYWMMAKERDEKDHKKEASMHPLWEEYAWPLKDMDDKEVIQIADQDKFY- 485

Query: 205 YVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLADPPDGVKIIWC 264
            +N  SG ++       +   GG+  DE GLGKTI  +SLI  ++  +A   D  +    
Sbjct: 486 -INPYSGALSLDFPLQEQHCLGGILADEMGLGKTIEMMSLIHSSKSDVAMRLDEKRSKAT 544

Query: 265 THNGDPRCGYYDLSGDKLTCNNMCLG 290
           + N  PR      S ++  C  + + 
Sbjct: 545 SVNNLPRLPASSSSVERAPCTTLVVA 570


>gi|149030493|gb|EDL85530.1| transcription termination factor, RNA polymerase II (predicted),
           isoform CRA_b [Rattus norvegicus]
          Length = 1070

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 29/156 (18%)

Query: 610 LYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN 669
           ++ S  TLIV P+ L+ HWK +I++ V   +L ++++    +     +   YD+VITT++
Sbjct: 546 VFTSTGTLIVCPASLIHHWKNEIEKRVNSNKLRIYLYHGPNRIQHAKVLSTYDIVITTYS 605

Query: 670 RLSAEWGRRK---------------KSPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAI 713
            L+ E    K                +P++QV W R++LDE H      N+ N ++Q +I
Sbjct: 606 LLAKEIPTAKHEGEVPGAKLSVEGISAPLLQVVWARIILDEAH------NVKNPRVQTSI 659

Query: 714 S---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           +   L A  RW +TGTP  N     L  +  ++KFL
Sbjct: 660 AVCKLQAQARWAVTGTPIQNN----LLDMYSLMKFL 691



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-S 1051
            K +I SQ+   + V+   L    + +A +   ++   ++  ++ F H      +L+   +
Sbjct: 919  KSVIVSQWTSMLQVVALHLRKNRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLA 978

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              +GL+L+    +FL++  W+ S+E+Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 979  GGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQEKDVVMHRFVCEGTVEEKILQL 1037


>gi|428297893|ref|YP_007136199.1| SNF2-like protein [Calothrix sp. PCC 6303]
 gi|428234437|gb|AFZ00227.1| SNF2-related protein [Calothrix sp. PCC 6303]
          Length = 1403

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 68/118 (57%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++H+H+I+  L    IK+  +     ++ + K +D F+     + L+   + 
Sbjct: 1254 KALVFSQFVDHLHIIKNYLEDQNIKYQYLDGSTPAAERKKRVDAFQGGEGDVFLISLKAG 1313

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+    V  M+P W+ ++E+Q   RAHR+G  RP+ +  L  + T+E+++++ 
Sbjct: 1314 GTGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAKNTIEDKIVDL 1371



 Score = 46.2 bits (108), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 123/274 (44%), Gaps = 29/274 (10%)

Query: 596  ALRLALCEPLDSVRLYLSRA----TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK 651
            A ++ L + + ++ + L+RA    TLI+ P+ +  +W ++ ++      L++  +    +
Sbjct: 971  ADQMGLGKTVQALGVILTRAQNGATLIIAPTSVCSNWVSEAEKFAPT--LNIIQFGSGNR 1028

Query: 652  PSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKL-Q 710
                     +D+V+ ++  L  E        + Q+ W  ++LDE   +    N+T K  Q
Sbjct: 1029 QKTLDELQPFDMVVCSYGLLQQE---EVAQMLAQIEWQTIVLDEAQAIK---NMTTKRSQ 1082

Query: 711  MAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEM 770
             A++L A  + + TGTP  N     L  L  + +F++    G +  +++     P E   
Sbjct: 1083 AAMNLKAGFKLITTGTPIEN----HLGELWNLFRFINPGLLG-SFDSFNQKFAVPIEKYQ 1137

Query: 771  EE-GRSRLLQLLHRCMISARKTD-LQTIPLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL 828
            ++  R++L +L+   ++   K + LQ +P   + +  +  ++E    Y  L     R   
Sbjct: 1138 DKAARTKLKKLVQPFLLRRIKNEVLQELPSRTEILLHVELSKEETAFYEAL-----RREA 1192

Query: 829  MADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
            +A  +D    +S    K  +  +  +R LR +CC
Sbjct: 1193 IAKLSDS---DSTAGQKHLQVLAEIMR-LRRACC 1222


>gi|403726467|ref|ZP_10947178.1| putative helicase [Gordonia rhizosphera NBRC 16068]
 gi|403204445|dbj|GAB91509.1| putative helicase [Gordonia rhizosphera NBRC 16068]
          Length = 1159

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 995  IIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSASL 1054
            ++FSQF   + +I ++L   GI ++ +   M++  +  +++ F   +S + L+   +   
Sbjct: 1009 LVFSQFTGFLGLIRERLEDMGIAYSYLDGSMNAKQRAAAIEEFTGGSSKVFLISLKAGGF 1068

Query: 1055 GLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDT 1114
            GL+L+     F+ +P W+ + E Q + RAHR+G TRP+ V  L   GT+EE+++  LQD 
Sbjct: 1069 GLNLTEADYCFVCDPWWNPAAEAQAVDRAHRIGQTRPVTVYRLVSAGTIEEKVVA-LQDK 1127

Query: 1115 DRC 1117
             R 
Sbjct: 1128 KRA 1130


>gi|254568488|ref|XP_002491354.1| RING finger protein involved in proteolytic control of sumoylated
            substrates [Komagataella pastoris GS115]
 gi|238031151|emb|CAY69074.1| RING finger protein involved in proteolytic control of sumoylated
            substrates [Komagataella pastoris GS115]
 gi|328352132|emb|CCA38531.1| Putative DNA helicase ino80 [Komagataella pastoris CBS 7435]
          Length = 1140

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGS 1051
            +K+I+FSQF     VIE  L    IKF      M  SN+  ++  F        +L+   
Sbjct: 985  EKIIVFSQFTTLFDVIEVILKENNIKFIRYDGSMSLSNRDAAIQEFYESTEKNVMLLSLK 1044

Query: 1052 A-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            A ++GL L+  +RV +M+P W+  +E+Q + RAHR+G  R + V  + ++ TVE+++L  
Sbjct: 1045 AGNVGLTLTCASRVIIMDPFWNPYVEDQAMDRAHRIGQLREVFVYRMLIKNTVEDRILT- 1103

Query: 1111 LQDTDR 1116
            +Q+T R
Sbjct: 1104 IQNTKR 1109



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 39/187 (20%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           + TLI+ P  L+  W+++I    +P  +L +F++   K  S   L   YD+V+T++  LS
Sbjct: 531 KTTLIIAPVSLLHQWESEILLKTKPEYRLKVFIYHKQKMSSFEELQQ-YDIVLTSYGTLS 589

Query: 673 AEW--------------------------GRRKKSPMM--QVHWLRVMLDEGHTLGSSLN 704
           ++                           G   KSP    +  +LRV+LDE H +     
Sbjct: 590 SQMKKHFEEAIKEADLQPNSSSIPAEDSGGISFKSPFFAKETKFLRVILDEAHKIKGKNT 649

Query: 705 LTNKLQMAISLTASN-RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGIL 763
           +T+K   A++L  S  RW LTGTP  N    ++  L P+L+FL  + Y  ++K +  GI+
Sbjct: 650 ITSK---AVALVKSKYRWCLTGTPLQN----KIEELWPLLRFLRIKPY-YDEKRFRTGIV 701

Query: 764 RPFEAEM 770
            P ++ M
Sbjct: 702 LPIKSSM 708


>gi|449302098|gb|EMC98107.1| hypothetical protein BAUCODRAFT_67041 [Baudoinia compniacensis UAMH
            10762]
          Length = 1156

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 3/128 (2%)

Query: 988  KALP-DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLAL 1046
            KA P  K +IFSQF   + ++   LT A I++      M    + K L  F +      L
Sbjct: 1000 KAEPLTKTVIFSQFTSFLDLLAPALTSANIQWLRFDGSMSQKERAKVLAEFANRPKFTVL 1059

Query: 1047 LMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1105
             +   A  +GL+L+   RVF+M+P W  ++E Q I R HRMG T  + V    + G++EE
Sbjct: 1060 FLSLRAGGVGLNLTCAKRVFMMDPWWSFAVEAQAIDRVHRMGQTEEVKVTRFVVEGSIEE 1119

Query: 1106 QMLEFLQD 1113
            +ML+ +QD
Sbjct: 1120 KMLK-VQD 1126



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--------------PSAHSLAWDY 661
           TL+V P  L+  W ++ ++  + G L + ++  ++K               + + +   Y
Sbjct: 552 TLVVAPMSLLAQWASEAEKASKQGTLKVLLYYGNEKNANLQNLCCGANATTAPNVIITSY 611

Query: 662 DVVITTFNRLSAEWGRR-KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            VV++ FN ++A  G R     +  + + RV+LDE H + +  + T K      L A++R
Sbjct: 612 GVVLSEFNSVAAHGGNRGSHGGLFSLEYWRVILDEAHMIKNRQSKTAK--ACYELAATHR 669

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W+LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE         ++Q 
Sbjct: 670 WVLTGTPIVN----RLEDLFSLVRFLRVEPWS-NFSFWKTFITMPFEKGEFVRALDVVQT 724

Query: 781 LHRCMISARKTDLQT--------IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R  D++T        +P  I E+  +  +      YN +    +R       
Sbjct: 725 VLEPLVLRRTKDMKTPDGEALVPLPPRIIEIEKVELSTPEREVYNHIFARAKRTFT---- 780

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
              ++VE+    K +      I  LR SCC
Sbjct: 781 ---ANVEAGTLMKSYTTIFAQILRLRQSCC 807



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 18/99 (18%)

Query: 165 LKLFPHQQAAVEWMLHREWNAEVLR-----HPLYIDLA-----TEDGFY--------FYV 206
           + L  +Q+ A+ WML++E + +        HPL+ +        ED           FYV
Sbjct: 414 MDLRKYQKQALHWMLNKETSQKDEERQHSMHPLWEEYLWPTKDAEDAPVPTVTGHDCFYV 473

Query: 207 NTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           N  SG+++       +   GG+  DE GLGKTI  LSLI
Sbjct: 474 NPYSGEMSLDFPVQEQTCLGGILADEMGLGKTIEMLSLI 512


>gi|402490686|ref|ZP_10837475.1| Non-specific serine/threonine protein kinase [Rhizobium sp. CCGE 510]
 gi|401810712|gb|EJT03085.1| Non-specific serine/threonine protein kinase [Rhizobium sp. CCGE 510]
          Length = 827

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQ+     ++ ++L   GI +  ++  + S  + + ++ FR+D  C   L   + 
Sbjct: 545  KAVVFSQWTRTHEIVIRRLKARGIGYVSLHGGVPSEKRPELVERFRNDPDCRVFLSTEAG 604

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
            S GL+L   + +  M+  W+ ++ EQ I+R HR+G  RP+ V     +GT+EE ML  L
Sbjct: 605  SAGLNLQNASTLVNMDLPWNPAILEQRIARIHRIGQARPVQVINFVSKGTIEEGMLSVL 663


>gi|392597808|gb|EIW87130.1| hypothetical protein CONPUDRAFT_45428 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 1136

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 18/143 (12%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK------PSAHSLAWDYDVVITTF 668
           ATLIV P+ L+  W+ ++++  +PG + + VW    +       S         +VIT++
Sbjct: 563 ATLIVAPTSLLTQWQEELERSSKPGSVSVTVWHGQNRLDLAGFDSKDEEETTLPIVITSY 622

Query: 669 NRLSAEWGRRKK----SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLL 723
             L++E  + ++    SP+ Q+ WLRV+LDE H   S    T+K   A+  + A  RW +
Sbjct: 623 GVLASEHSKLQRAGGSSPIYQIEWLRVVLDEAHHCKSR---TSKTARAVYEIRARRRWAV 679

Query: 724 TGTPTPNTPNSQLSHLQPMLKFL 746
           TGTP  N    +L  LQ +LK+L
Sbjct: 680 TGTPIVN----KLEDLQSLLKYL 698



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 4/121 (3%)

Query: 993  KVIIFSQF---LEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD 1049
            + ++FSQF   L  I V  ++  +   +F G       S  I            L + + 
Sbjct: 983  RAVVFSQFTSFLSFISVALERERLTWYRFDGSMDVRKRSAAIAEFKKPERKPKVLIVSLK 1042

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GL+L+    VF+M+  W+ ++E Q I R HR+G  + ++V+   +  T+E ++L+
Sbjct: 1043 -AGGVGLNLTTANHVFMMDCWWNSAVESQAIDRVHRIGQEKTVYVKHFIIDHTIEGRILQ 1101

Query: 1110 F 1110
             
Sbjct: 1102 I 1102


>gi|355558319|gb|EHH15099.1| hypothetical protein EGK_01145 [Macaca mulatta]
          Length = 1167

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 29/153 (18%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S  TLI+ P+ L+ HWK ++++ V   +L ++++    + S   +   YD+VITT++ ++
Sbjct: 646 SHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARVLSTYDIVITTYSLVA 705

Query: 673 AEWG---------------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS-- 714
            E                  R  +P++Q+ W R++LDE H      N+ N ++Q +I+  
Sbjct: 706 KEIPTDKQEAEIPGANLSVERTSTPLLQIAWARIILDEAH------NVKNPRVQTSIAVC 759

Query: 715 -LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
            L A  RW +TGTP  N     L  +  +LKFL
Sbjct: 760 KLQACARWAVTGTPIQNN----LLDMYSLLKFL 788



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 15/153 (9%)

Query: 973  TFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIHVIEQQLTVAGIKF 1018
            TF K +L+    ES K              +   K +I SQ+   + V+   L   G+ +
Sbjct: 982  TFFKTELFEDTRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTY 1041

Query: 1019 AGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-SASLGLDLSFVTRVFLMEPIWDRSMEE 1077
            A +   ++   ++  ++ F H      +L+   +  +GL+L+    +FL++  W+ S+E+
Sbjct: 1042 ATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLED 1101

Query: 1078 QVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1102 QACDRIYRVGQQKDVVIHRFVCEGTVEEKILQL 1134


>gi|109014585|ref|XP_001112974.1| PREDICTED: transcription termination factor 2-like isoform 1
           [Macaca mulatta]
          Length = 1170

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 29/153 (18%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S  TLI+ P+ L+ HWK ++++ V   +L ++++    + S   +   YD+VITT++ ++
Sbjct: 649 SHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARVLSTYDIVITTYSLVA 708

Query: 673 AEWG---------------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS-- 714
            E                  R  +P++Q+ W R++LDE H      N+ N ++Q +I+  
Sbjct: 709 KEIPTNKQEAEIPGANLSVERTSTPLLQIAWARIILDEAH------NVKNPRVQTSIAVC 762

Query: 715 -LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
            L A  RW +TGTP  N     L  +  +LKFL
Sbjct: 763 KLQACARWAVTGTPIQNN----LLDMYSLLKFL 791



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 15/153 (9%)

Query: 973  TFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIHVIEQQLTVAGIKF 1018
            TF K +L+    ES K              +   K +I SQ+   + V+   L   G+ +
Sbjct: 985  TFFKTELFEDTRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTY 1044

Query: 1019 AGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-SASLGLDLSFVTRVFLMEPIWDRSMEE 1077
            A +   ++   ++  ++ F H      +L+   +  +GL+L+    +FL++  W+ S+E+
Sbjct: 1045 ATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLED 1104

Query: 1078 QVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1105 QACDRIYRVGQQKDVVIHRFVCEGTVEEKILQL 1137


>gi|58259855|ref|XP_567340.1| DNA repair protein RAD5 [Cryptococcus neoformans var. neoformans
            JEC21]
 gi|134116468|ref|XP_773188.1| hypothetical protein CNBJ1830 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50255809|gb|EAL18541.1| hypothetical protein CNBJ1830 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|57229390|gb|AAW45823.1| DNA repair protein RAD5, putative [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1359

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 1/134 (0%)

Query: 975  LKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSL 1034
            L+QD         K +  K I+FSQ+   +  I   L    I++A +   M    + K++
Sbjct: 1190 LEQDDVEEMDAEGKPVVTKSIVFSQWTTMLDRIADMLDETNIRYARLDGTMTRDERSKAI 1249

Query: 1035 DMFRHDASCLALLMDGSAS-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIH 1093
            D  +   +   LL+   A  +GL+L+  +R +L++P W+ S+E Q I R HRMG TRP+ 
Sbjct: 1250 DALKFKKNVEVLLVSTRAGGVGLNLTVASRCYLVDPYWNPSVESQAIDRIHRMGQTRPVV 1309

Query: 1094 VETLAMRGTVEEQM 1107
               L ++ ++EE++
Sbjct: 1310 AIKLMIKDSIEEKL 1323


>gi|336467908|gb|EGO56071.1| hypothetical protein NEUTE1DRAFT_122706 [Neurospora tetrasperma
           FGSC 2508]
 gi|350289856|gb|EGZ71081.1| hypothetical protein NEUTE2DRAFT_159319 [Neurospora tetrasperma
           FGSC 2509]
          Length = 680

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 111/217 (51%), Gaps = 20/217 (9%)

Query: 613 SRATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVW---TDHKKPSAHSLAWDYDVVITTF 668
           ++ATLIVVPS  L+ +W  +I  H+ PG L+L ++     HK P   SLA   DVV+TT+
Sbjct: 197 TQATLIVVPSAQLMHNWAAEIASHM-PGALNLILFHGQGRHKNP--ESLA-STDVVLTTY 252

Query: 669 NRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPT 728
             L+A+   RK   + ++ W RV+LDE H + +    + + + A SL+ + RW LTGTP 
Sbjct: 253 RTLAAD--HRKARLLQKMDWYRVVLDEAHWIRNPS--SQQFRAATSLSTNRRWCLTGTPI 308

Query: 729 PNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRL-LQLLHRCMIS 787
            N    +L  L  +  FL    Y  ++  +   +L P E   ++  + L   L   C+  
Sbjct: 309 QN----KLDDLASLAHFLRVPPY-PDKTMFRRYVLVPLEKGDQKCTNPLRFYLRQHCL-- 361

Query: 788 ARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTVR 824
            R      +P   +++ +L  + E    Y++++ T +
Sbjct: 362 RRTNKCLNLPNLSEKILYLQLSIEEQEAYDKILSTAK 398



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 1/118 (0%)

Query: 1004 IHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GSASLGLDLSFVT 1062
            +H + Q +  AGI  A +    +++ +++ +  F+ D+    LL+  G+ ++GL L+  +
Sbjct: 537  LHYLAQLIQQAGIPHAQIDGRTNNAERLRHIKAFQEDSQVPVLLISIGTGAIGLTLTAAS 596

Query: 1063 RVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTDRCRRL 1120
             V ++EP W+ S+EEQ I RA R+G T+ + V    M GTVE  +L   Q      R 
Sbjct: 597  HVHIIEPQWNPSVEEQAIGRARRIGQTKEVVVTRYIMTGTVERSILSLQQRKKNIARF 654


>gi|109014588|ref|XP_001112999.1| PREDICTED: transcription termination factor 2-like isoform 2
           [Macaca mulatta]
          Length = 1163

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 29/153 (18%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S  TLI+ P+ L+ HWK ++++ V   +L ++++    + S   +   YD+VITT++ ++
Sbjct: 642 SHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARVLSTYDIVITTYSLVA 701

Query: 673 AEWG---------------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS-- 714
            E                  R  +P++Q+ W R++LDE H      N+ N ++Q +I+  
Sbjct: 702 KEIPTNKQEAEIPGANLSVERTSTPLLQIAWARIILDEAH------NVKNPRVQTSIAVC 755

Query: 715 -LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
            L A  RW +TGTP  N     L  +  +LKFL
Sbjct: 756 KLQACARWAVTGTPIQNN----LLDMYSLLKFL 784



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 15/153 (9%)

Query: 973  TFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIHVIEQQLTVAGIKF 1018
            TF K +L+    ES K              +   K +I SQ+   + V+   L   G+ +
Sbjct: 978  TFFKTELFEDTRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTY 1037

Query: 1019 AGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-SASLGLDLSFVTRVFLMEPIWDRSMEE 1077
            A +   ++   ++  ++ F H      +L+   +  +GL+L+    +FL++  W+ S+E+
Sbjct: 1038 ATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLED 1097

Query: 1078 QVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1098 QACDRIYRVGQQKDVVIHRFVCEGTVEEKILQL 1130


>gi|15217826|ref|NP_171767.1| putative DNA repair protein [Arabidopsis thaliana]
 gi|332189335|gb|AEE27456.1| putative DNA repair protein [Arabidopsis thaliana]
          Length = 678

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 1/117 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K I+FSQF   + +I   L  +G+    +   M  + K  +L  F+ +  C  LLM   A
Sbjct: 527  KAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLLMSLQA 586

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              + L+L+  + VF+M+P W+ ++E Q   R HR+G  +P+ V    M  TVEE++L
Sbjct: 587  GGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKIL 643



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 20/176 (11%)

Query: 573 RVEKGITRWYYPKTLDNLAFDLAALRLALCEPLDSVRLYLSRA-------------TLIV 619
           + +K    W   + L  +   + A  + + + + ++ L L+R              TL++
Sbjct: 136 KYQKEFLAWATIQELSAVRGGILADEMGMGKTIQAISLVLARREVDRAKSREAVGHTLVL 195

Query: 620 VPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSAEWGRRK 679
           VP   +  W  +I +   PG   +  +   K+        +YD V+TT   +  E+ + +
Sbjct: 196 VPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDKNVQKLMNYDFVLTTSPIVENEYRKDE 255

Query: 680 K-----SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
                 SP+  + W R+++DE H + +  + T K   A  L A+ RW L+GTP  N
Sbjct: 256 GVDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFA--LEATYRWALSGTPLQN 309


>gi|302405899|ref|XP_003000786.1| ATP-dependent helicase RIS1 [Verticillium albo-atrum VaMs.102]
 gi|261360743|gb|EEY23171.1| ATP-dependent helicase RIS1 [Verticillium albo-atrum VaMs.102]
          Length = 1103

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 84/191 (43%), Gaps = 18/191 (9%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTF 668
           + R TL+V P  L+  W+ +I+  V   + H      H  P       D   YDVV+TT+
Sbjct: 343 VERTTLVVAPLALIRQWEAEIKDKVE--RSHGLKVCVHHGPQRTKRFQDLAMYDVVVTTY 400

Query: 669 NRLSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
             L +E G         K+    +HW RV+LDE HT+ +    + K     +L A  RW 
Sbjct: 401 QILVSEHGHSSDAETGVKAGCFGLHWWRVVLDEAHTIKNRNAKSTK--ACYALRAEYRWC 458

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           L+GTP  N     L  LQ ++KFL    Y  +   W   I +P +        R L  L 
Sbjct: 459 LSGTPMQNN----LEELQSLIKFLRIRPY-DDLAEWKDQIEKPLKNGKGHIAIRRLHSLL 513

Query: 783 RCMISARKTDL 793
           RC +  R  D+
Sbjct: 514 RCFMKRRTKDI 524



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 23/146 (15%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K IIFSQF   + +IE      G+KF      M +  +  SLD  R+D     LL     
Sbjct: 878  KFIIFSQFTSMMDLIEPFFRKDGLKFTRYDGGMKNDEREASLDRLRNDKKTRILLCSLKC 937

Query: 1052 ASLGLDLSFVTRVFLMEPIWD---------------------RSMEEQVISRAHRMGATR 1090
             SLGL+L+  TRV ++EP W+                     + +EEQ I R HR+  T 
Sbjct: 938  GSLGLNLTAATRVIIVEPFWNPVRAPSLCSRQNMAGELLTEWQFVEEQAIDRVHRLTQTI 997

Query: 1091 PIHVETLAMRGTVEEQMLEFLQDTDR 1116
             + V  L +  TVE+++L  LQ+  R
Sbjct: 998  DVIVYRLIVEATVEDRIL-ALQEKKR 1022


>gi|406835271|ref|ZP_11094865.1| helicase [Schlesneria paludicola DSM 18645]
          Length = 1089

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 3/167 (1%)

Query: 976  KQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLD 1035
            K DL+   ++  +    + ++FSQF +H+ ++ + L    IK+  +        +  ++D
Sbjct: 918  KLDLFLETIDELRDGRHRALVFSQFTQHLAIVREALDERKIKYQYLDGSTPVKKRQAAVD 977

Query: 1036 MFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVE 1095
             F+     L L+   +   GL+L+    V  ++P W+ ++E+Q   RAHR+G TRP+ V 
Sbjct: 978  AFQAGDGDLFLISLKAGGSGLNLTAADYVVHLDPWWNPAVEDQASDRAHRIGQTRPVTVY 1037

Query: 1096 TLAMRGTVEEQMLEFLQDTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
             L  +GT+EE++L    D    R L+   L   E  G  S + L D 
Sbjct: 1038 RLIAKGTIEEKILNLHADK---RGLVAGILEGTESAGKLSTKELMDL 1081


>gi|355745581|gb|EHH50206.1| hypothetical protein EGM_00997 [Macaca fascicularis]
          Length = 1167

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 29/153 (18%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S  TLI+ P+ L+ HWK ++++ V   +L ++++    + S   +   YD+VITT++ ++
Sbjct: 646 SHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARVLSTYDIVITTYSLVA 705

Query: 673 AEWG---------------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS-- 714
            E                  R  +P++Q+ W R++LDE H      N+ N ++Q +I+  
Sbjct: 706 KEIPTNKQEAEIPGANLSVERTSTPLLQIAWARIILDEAH------NVKNPRVQTSIAVC 759

Query: 715 -LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
            L A  RW +TGTP  N     L  +  +LKFL
Sbjct: 760 KLQACARWAVTGTPIQNN----LLDMYSLLKFL 788



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 15/153 (9%)

Query: 973  TFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIHVIEQQLTVAGIKF 1018
            TF K +L+    ES K              +   K +I SQ+   + V+   L   G+ +
Sbjct: 982  TFFKTELFEDTRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTY 1041

Query: 1019 AGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-SASLGLDLSFVTRVFLMEPIWDRSMEE 1077
            A +   ++   ++  ++ F H      +L+   +  +GL+L+    +FL++  W+ S+E+
Sbjct: 1042 ATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLED 1101

Query: 1078 QVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1102 QACDRIYRVGQQKDVVIHRFVCEGTVEEKILQL 1134


>gi|346972823|gb|EGY16275.1| ATP-dependent helicase RIS1 [Verticillium dahliae VdLs.17]
          Length = 1130

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + +IE      G++F      M +  +  SLD  R+D     LL     
Sbjct: 895  KFIVFSQFTSMMDLIEPFFRKDGLRFTRYDGGMKNDEREASLDRLRNDDKTRILLCSLKC 954

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + V  L +  TVE+++L  L
Sbjct: 955  GSLGLNLTAATRVIIVEPFWNPFVEEQAIDRVHRLTQTIDVVVYRLIVEATVEDRILA-L 1013

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 1014 QEKKR 1018



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 84/191 (43%), Gaps = 18/191 (9%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTF 668
           + + TL+V P  L+  W+ +I+  V   + H      H  P       D   YDVV+TT+
Sbjct: 337 VEKTTLVVAPLALIRQWEAEIKDKVE--RSHGLKVCVHHGPQRTKRFKDLAMYDVVVTTY 394

Query: 669 NRLSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
             L +E G         K+    +HW RV+LDE HT+ +    + K     +L A  RW 
Sbjct: 395 QILVSEHGHSSDADNGVKAGCFGLHWWRVVLDEAHTIKNRNAKSTK--ACCALRAEYRWC 452

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           L+GTP  N     L  LQ +++FL    Y  +   W   I +P +        R L  L 
Sbjct: 453 LSGTPMQNN----LEELQSLIQFLRIRPY-DDLAEWKDQIEKPLKNGKGHIAIRRLHSLL 507

Query: 783 RCMISARKTDL 793
           RC +  R  D+
Sbjct: 508 RCFMKRRTKDI 518


>gi|402855843|ref|XP_003892523.1| PREDICTED: LOW QUALITY PROTEIN: transcription termination factor 2
           [Papio anubis]
          Length = 1169

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 29/153 (18%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           S  TLI+ P+ L+ HWK ++++ V   +L ++++    + S   +   YD+VITT++ ++
Sbjct: 648 SHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARVLSTYDIVITTYSLVA 707

Query: 673 AEWG---------------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS-- 714
            E                  R  +P++Q+ W R++LDE H      N+ N ++Q +I+  
Sbjct: 708 KEIPTNKQEAEIPGANLSVERTSTPLLQIAWARIILDEAH------NVKNPRVQTSIAVC 761

Query: 715 -LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
            L A  RW +TGTP  N     L  +  +LKFL
Sbjct: 762 KLQACARWAVTGTPIQNN----LLDMYSLLKFL 790



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 15/153 (9%)

Query: 973  TFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIHVIEQQLTVAGIKF 1018
            TF K +L+    ES K              +   K +I SQ+   + V+   L   G+ +
Sbjct: 984  TFFKTELFEDTRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTY 1043

Query: 1019 AGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-SASLGLDLSFVTRVFLMEPIWDRSMEE 1077
            A +   ++   ++  ++ F H      +L+   +  +GL+L+    +FL++  W+ S+E+
Sbjct: 1044 ATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLED 1103

Query: 1078 QVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1104 QACDRIYRVGQQKDVVIHRFVCEGTVEEKILQL 1136


>gi|428173019|gb|EKX41924.1| hypothetical protein GUITHDRAFT_112060 [Guillardia theta CCMP2712]
          Length = 1491

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 30/200 (15%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWT------DHKKPSAHSLAWDYDVVITTF 668
           ATLIV P  ++  W ++I++H+ P +L ++V+       D ++     LA   D+V+TT+
Sbjct: 493 ATLIVCPMPILHQWISEIERHLPPNKLRIYVYNGLKDGGDAEEIMKAILA--SDLVLTTY 550

Query: 669 NRLSAEWGRR---------------KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAI 713
             L  +   +                KSP+++V W RV LDE   + S     N  QMA 
Sbjct: 551 EVLRTDIYYKSDQSRLLRNEKKYKVSKSPLLRVEWWRVCLDEAQMVES--RTANTSQMAA 608

Query: 714 SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEG 773
            L +  RW +TGTP        L  L  +  FL    + Q +  W   +  P+ A +E  
Sbjct: 609 LLRSQRRWCVTGTPIQRG----LEDLHGLAVFLDAGPFDQ-RPFWLNCVQMPYMAGLERA 663

Query: 774 RSRLLQLLHRCMISARKTDL 793
           R+RL   +HR M  ++K D+
Sbjct: 664 RARLDAWVHRLMWRSQKKDV 683



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 167 LFPHQQAAVEWMLHRE---WNAEVLRHPLY--IDLATEDGFYFYVNTVSGDIATGTAPTM 221
           L P+Q  AV WM  RE      E L HP      +       FY    +G +AT     +
Sbjct: 250 LRPYQLRAVSWMEEREKPVEEREPLLHPALKCCRIGRRKRSLFYCEW-TGHLATRPTHLV 308

Query: 222 RDFHGGMFCDEPGLGKTITALSLI 245
            D  GG+ CDE GLGKT+  L LI
Sbjct: 309 DDLRGGVLCDEMGLGKTVELLELI 332


>gi|380495221|emb|CCF32565.1| DNA repair protein RAD5 [Colletotrichum higginsianum]
          Length = 1156

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 1/117 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +IE  L    IKF  +   M    +   LD F+   +   LL+   A
Sbjct: 1006 KSVVFSQFTSFLSLIEPALARVNIKFLRLDGSMAQKARAAVLDEFQESKTFTVLLLSLRA 1065

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +GL+L+   RV++M+P W  ++E Q I R HRMG    + V    ++ +VEE+ML
Sbjct: 1066 GGVGLNLTSAKRVYMMDPWWSFAVEAQAIDRVHRMGQDEEVKVYRFIVKESVEERML 1122



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 120/270 (44%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS--------------AHSLAWDY 661
           TL+V P  L+  W+++ ++  + G L   V+  + K +                 +   Y
Sbjct: 578 TLVVAPMSLLSQWQSEAEKASKEGTLKAIVYYGNDKANNLQALCCAASAASAPDVVITSY 637

Query: 662 DVVITTFNRLSAE-WGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            VV++ FN+++ +   +   + +  +++ RV+LDE H + +  + T K    IS  A +R
Sbjct: 638 GVVLSEFNQVATKKVDKSAHTGIFSLNFFRVILDEAHHIKNRGSKTAKACYEIS--AEHR 695

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W+LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE++       ++Q 
Sbjct: 696 WVLTGTPIVN----KLEDLFSLVRFLRVEPWN-NFSFWKTFITVPFESKDFMRALDVVQT 750

Query: 781 LHRCMISARKTDLQT------IPLCIK--EVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R  D++T      +PL  K  E+  +  ++     Y+ +    +++      
Sbjct: 751 VLEPLVLRRTKDMKTPDGEPLVPLPPKHVEIVDVELSQTEREIYDYIFTRAKQSFR---- 806

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
               +VE+    K +      I  LR SCC
Sbjct: 807 ---ENVEAGTVMKAFTSIFAHILRLRQSCC 833



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 17/98 (17%)

Query: 165 LKLFPHQQAAVEWMLHREW----NAEVLRHPLYIDLA-------------TEDGFYFYVN 207
           + L P+Q+ A+ WM+ +E     N E   HPL+ + A              +D  +FYVN
Sbjct: 440 MDLRPYQKQALHWMMTKEKDQKSNREPSMHPLWEEYAWPLKDTDEKELLQVQDQQHFYVN 499

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             SGD++       ++  GG+  DE GLGKTI  LSL+
Sbjct: 500 PYSGDLSLDFPVQEQNCLGGILADEMGLGKTIQMLSLV 537


>gi|448103207|ref|XP_004199982.1| Piso0_002540 [Millerozyma farinosa CBS 7064]
 gi|359381404|emb|CCE81863.1| Piso0_002540 [Millerozyma farinosa CBS 7064]
          Length = 775

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 10/137 (7%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           ++ TLIV P  L++ WK +I+   +   L  + +   +K +  +    YDVVI ++N L+
Sbjct: 272 NKPTLIVCPVSLINQWKLEIETKAKG--LVAYAYNRKEKLNGFAALAKYDVVIISYNTLA 329

Query: 673 AEWGRRKKSPMM--QVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPN 730
           +E+ +   SP    +  W RV+LDE H + + L   NK      L A  RW LTGTP  N
Sbjct: 330 SEYSKHGSSPFFDSKSTWHRVVLDEAHQVKNMLTKQNK--AVCDLEAKRRWCLTGTPIQN 387

Query: 731 TPNSQLSHLQPMLKFLH 747
             N     L+ + KFL 
Sbjct: 388 GFND----LRALFKFLR 400



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K IIFSQF     + +  L    I        M  S +  +LD FR+      LL     
Sbjct: 618  KTIIFSQFTSLFPIFKDILKSHEIDSLIFDGSMDISKRSTTLDKFRNSNRHNVLLCSLKC 677

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S+GL+L+  +RV L +P W+  ++EQ I R +R+G    + +  L +RGTVEE++L  L
Sbjct: 678  GSVGLNLTCASRVILFDPWWNPQIQEQAIDRVYRIGQKSSVDIYELIIRGTVEEKIL-LL 736

Query: 1112 QDTDR 1116
            Q+  R
Sbjct: 737  QEKKR 741


>gi|391864570|gb|EIT73865.1| helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box
           superfamily [Aspergillus oryzae 3.042]
          Length = 973

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 16/211 (7%)

Query: 613 SRATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           +RATL++VPS  L++ W+ +I  H+  G + +  +    +    S    YD+VITT+N L
Sbjct: 447 TRATLVIVPSRVLINTWEREIDDHLNAG-IKMMRYHGRSRKDLISNIDRYDIVITTYNTL 505

Query: 672 SAEWGRR----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
           + E   +     +SP+    W RV+LDE H +      T   +  + L A +RW L+GTP
Sbjct: 506 AKEHDAKILGKGQSPLHDFAWYRVVLDEAHMI--RRRSTTFHRAVVELRAKSRWCLSGTP 563

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF--EAEMEEGRSRLLQLLHRCM 785
             N+    L  L  +L F+  + +  + + +   I  PF   A   +   RL  LL    
Sbjct: 564 IQNS----LGDLGSLLAFIQLKPF-HDPRNFSHWIANPFGVRATKRKAIERLTHLLEAVC 618

Query: 786 ISARKTDLQTIPLCIKEVTFLNFTEEHAGTY 816
           +  R  +   +P    E+  + FT E    Y
Sbjct: 619 LR-RTIERVDLPGQRSEIRLVQFTPEERAKY 648



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 1/116 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K IIFS +   + +I + L  + I+F  +     +S + K LD F    +   L+M  G+
Sbjct: 821  KSIIFSCWTRTLDLIAKHLKASRIEFERIDGKTSTSQRQKILDRFDGTRTVPVLIMTTGT 880

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
             + GL+L  V RVF++EP W+ S+E Q I+RA R+G  + + V    +  ++EE M
Sbjct: 881  GAFGLNLQSVNRVFIVEPQWNPSVESQAIARAIRLGQEQQVLVTRYRVENSIEEAM 936


>gi|431896542|gb|ELK05954.1| Transcription termination factor 2 [Pteropus alecto]
          Length = 1127

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 23/157 (14%)

Query: 606 DSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVI 665
           D    ++S  TLI+ P+ L+ HWK ++++ V   +L + ++    +     +   YD+VI
Sbjct: 602 DDTTEFISHGTLIICPASLIHHWKKEVEKRVSYNKLRVCLYHGPSRDQRAGVLSTYDIVI 661

Query: 666 TTFNRLSAEWGRRK---------------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQ 710
           TT++ L+ E   +K                +P++Q+ W R++LDE H +    N   +  
Sbjct: 662 TTYSLLAKEIPMKKHEGEVAVSNLSEEGISTPLLQIVWARIILDEAHNIK---NPRVQTS 718

Query: 711 MAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
           MA+  L A  RW +TGTP  N     L  +  +LKFL
Sbjct: 719 MAVCKLQARARWAVTGTPIQNN----LLDMYSLLKFL 751



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 76/154 (49%), Gaps = 7/154 (4%)

Query: 959  IELQPSYRQWSNTNTFLKQ-DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIK 1017
            +EL    R+ +  ++ L + +  R N  S K+     +I SQ+   + V+   L    + 
Sbjct: 946  VELFEDTRESTKISSLLAELEAIRRNSASQKS-----VIVSQWTSMLKVVALHLKRHRLT 1000

Query: 1018 FAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-SASLGLDLSFVTRVFLMEPIWDRSME 1076
            +A +   ++   ++  ++ F +      +L+   +  +GL+L+    +FL++  W+ S+E
Sbjct: 1001 YATIDGSVNPKQRMDLVEAFNNAGGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLE 1060

Query: 1077 EQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            +Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1061 DQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQL 1094


>gi|378550741|ref|ZP_09825957.1| hypothetical protein CCH26_11669 [Citricoccus sp. CH26A]
          Length = 1218

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 983  NLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDAS 1042
            NLE   A   +VIIFSQF   +  +  +L   G+ FA  Y    + N+ + +  F+   +
Sbjct: 1057 NLEEIVAEGHRVIIFSQFTSFLSRVGDRLADRGVAFA--YLDGSTRNRSEVISQFKKGTA 1114

Query: 1043 CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGT 1102
               L+   +   GL L+    VFL++P W+ + E Q + RAHR+G  R + V  +   GT
Sbjct: 1115 PAFLISLKAGGFGLTLTEADYVFLLDPWWNPATEAQAVDRAHRIGQERTVMVYRMVAEGT 1174

Query: 1103 VEEQMLEFLQ 1112
            +EE++L   Q
Sbjct: 1175 IEEKVLALQQ 1184


>gi|358374218|dbj|GAA90812.1| SNF2 family helicase [Aspergillus kawachii IFO 4308]
          Length = 1135

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 43/214 (20%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRP---GQLHLFVWTDHKKP--SAHSLAWDYDVVITTF 668
           + TLIVVPS+LV HWKTQI +H      G + ++  +   +   +  SLA  YDV+ITT+
Sbjct: 487 KTTLIVVPSHLVTHWKTQINRHCDEKAIGDVLIYKASSRLESLNTVGSLA-KYDVIITTY 545

Query: 669 N-------------------RLSAEWGRR---KKSPMMQVHWLRVMLDEGHTLGSSLNLT 706
           +                   +LSA W +    +  P+ ++ + R++LDEGHT+    N  
Sbjct: 546 DEVRRSYPPMKLTDSMKDDEKLSAWWDQSFDAEVGPLHKIKFHRIILDEGHTIK---NHI 602

Query: 707 NKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRP 765
           + + +A+ SLT   +W+L+GTP  N     L    P+  FL            D G+   
Sbjct: 603 SSVSIAVRSLTGHYKWILSGTPVHN----HLEEFYPLFDFLGVPGIK------DAGLFIK 652

Query: 766 FEAEMEEGRSRLLQLLHRCMI-SARKTDLQTIPL 798
                +EG  RL+ LL   +     K+ L ++P+
Sbjct: 653 NFCSDDEGHDRLVNLLRAFLFRRTHKSRLFSLPV 686



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 60/121 (49%), Gaps = 2/121 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG- 1050
            DK++IF+QFL+ + ++       G  F  +   +  S +  ++  F    S + +L+   
Sbjct: 950  DKIVIFTQFLDFVEILSTMCKAEGWPFVLLTGKLGLSVREDNMKTFSDKNSEVRVLIASL 1009

Query: 1051 -SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             +  +GLDLS   +  L++  W+ +++EQ   R  R+G    +    L +  ++++ +L+
Sbjct: 1010 KAGGIGLDLSAANKCILVDLWWNEAIQEQAFCRLFRIGQESEVEFVKLIVDNSIDDYLLK 1069

Query: 1110 F 1110
             
Sbjct: 1070 L 1070


>gi|390948557|ref|YP_006412316.1| DNA/RNA helicase [Thiocystis violascens DSM 198]
 gi|390425126|gb|AFL72191.1| DNA/RNA helicase, superfamily II, SNF2 family [Thiocystis violascens
            DSM 198]
          Length = 1379

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 66/118 (55%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++H+H+I   L   G+++  +      + +  ++  F+     L L+   + 
Sbjct: 1228 KALVFSQFVDHLHLIRAHLDARGVRYQYLDGSTPEAKRKTAVAAFQAGEGDLFLISLRAG 1287

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+    V  M+P W+ ++E+Q   RAHR+G  RP+ +  L  +GT+EE+++  
Sbjct: 1288 GSGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQERPVTIYRLITKGTIEEKIIAL 1345


>gi|320587549|gb|EFX00030.1| DNA excision repair protein [Grosmannia clavigera kw1407]
          Length = 1181

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 2/122 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +IE  L    + F  +   M    +   L+ FR       LL+   A
Sbjct: 1012 KSVVFSQFTSFLSLIEPALRRDNMAFLRLDGTMAQKARAAVLEDFRRSDRFTVLLISLRA 1071

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              +GL+L+   RVF+M+P W  S+E Q I R HRMG    + V     +G+VEE+ML+ +
Sbjct: 1072 GGVGLNLTMAKRVFVMDPWWSFSVEAQAIDRVHRMGQDEEVKVYRFIAKGSVEEKMLK-I 1130

Query: 1112 QD 1113
            QD
Sbjct: 1131 QD 1132



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 122/268 (45%), Gaps = 35/268 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP-------SAHSLAWDYDVVITTF 668
           TL+V P  L+  W+++ ++    G L   V+  + K        S  + A   DVVIT++
Sbjct: 582 TLVVAPMSLLAQWQSEAERASTDGSLRSMVYYGYDKAANLKALCSTDAAATAPDVVITSY 641

Query: 669 NRLSAEWGR---RKKSP---MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
             + +E+ +   R  +P   +  +++ R++LDEGHT+ +  + T K     +LTA +RW+
Sbjct: 642 GTVLSEFTQMWSRDSNPGQGLFALNFFRIILDEGHTIKNRQSKTAK--ACYALTAEHRWV 699

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE++       ++Q + 
Sbjct: 700 LTGTPVVN----RLEDLFSLIRFLRVEPW-DNFSFWRTFITVPFESKDFMRALDVVQTVL 754

Query: 783 RCMISARKTDLQT--------IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNILMADWND 834
             ++  R  D++T        +P    E+  +  +      Y  + + V+R+        
Sbjct: 755 EPLVMRRTKDMKTPDGRPLVALPSKQLEIVNVELSATERDIYEHIFLRVKRSFT------ 808

Query: 835 PSHVESLLNPKQWKFRSTTIRNLRLSCC 862
            + VE+    K +      +  LR  CC
Sbjct: 809 -ATVEAGTVMKSYTSIFAQVLRLRQCCC 835



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 33/114 (28%)

Query: 165 LKLFPHQQAAVEWMLHREWNA--------------------EVLRHPLYID----LATED 200
           L L P+Q+ A+ WM+ +E +                     +V  HPL+ +    L   D
Sbjct: 430 LSLRPYQKQALHWMISKERDGETGETGETGETGENAQKKEKKVSMHPLWEEYLWPLQDVD 489

Query: 201 GF---------YFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           G           FYVN  SGD++       ++  GG+  DE GLGKTI  LSLI
Sbjct: 490 GNDLPPVQGQPSFYVNPYSGDLSLDFPAQEQNCRGGILADEMGLGKTIQMLSLI 543


>gi|15220993|ref|NP_172004.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
 gi|332189671|gb|AEE27792.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
          Length = 833

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 1/119 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K I+FSQF   + +I   L   G+    +   M  + +  +++ F+ D  C   LM   A
Sbjct: 682  KAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKA 741

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              + L+L+  + VF+M+P W+ ++E Q   R HR+G  +PI V    +  TVEE++L  
Sbjct: 742  GGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRL 800



 Score = 43.9 bits (102), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%)

Query: 678 RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLS 737
           ++KS +  V W R++LDE H +      +N  +   +L A+ RW L+GTP  N    ++ 
Sbjct: 344 KEKSLLHSVKWNRIILDEAHYIKE--RRSNTARAVFALEATYRWALSGTPLQN----RVG 397

Query: 738 HLQPMLKFLHEEAY 751
            L  +++FL    Y
Sbjct: 398 ELYSLIRFLQIRPY 411


>gi|302917785|ref|XP_003052516.1| hypothetical protein NECHADRAFT_105975 [Nectria haematococca mpVI
           77-13-4]
 gi|256733456|gb|EEU46803.1| hypothetical protein NECHADRAFT_105975 [Nectria haematococca mpVI
           77-13-4]
          Length = 915

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 107/251 (42%), Gaps = 37/251 (14%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWD---YDVVITTF 668
           + + TL+V P  L+  W+ +I+  V   + H      H  P+      D   YDVV+TT+
Sbjct: 192 IEKTTLVVAPLALIRQWEHEIKDKVE--KSHGLKVCVHHGPNRTKRFKDLALYDVVVTTY 249

Query: 669 NRLSAEWGRRK------KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
             L +E G         K+    +HW RV+LDE HT+ +      K     +L +  RW 
Sbjct: 250 QILVSEHGNSSDAENGVKAGCFGLHWWRVILDEAHTIKNRNAKATK--SCYALRSEYRWC 307

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           L+GTP  N     L  LQ ++KFL    Y  + K W   I  P +        R L  L 
Sbjct: 308 LSGTPMQNN----LDELQSLVKFLRIRPY-DDLKEWKEHIDLPLKNGKGHIAIRRLHSLL 362

Query: 783 RCMISARKTDLQTIPLCIKEVTFLN----FTEEHAGTYNELVVTVRRNILMADWNDPSHV 838
           RC +  R  D+      +KE   LN     + E  G+     VT R+ + +A        
Sbjct: 363 RCFMKRRTKDI------LKEAGALNPGGKPSAEGEGSATGFKVTERKVVTVA-------- 408

Query: 839 ESLLNPKQWKF 849
            + L+P + KF
Sbjct: 409 -TELSPAERKF 418



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 5/136 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K I+FSQF   + ++E         F      M +  + +SL   R D     LL     
Sbjct: 735  KFIVFSQFTSMLDLVEPFFRKERFSFVRYDGSMKNDEREESLRRLRSDPKTRILLCSLKC 794

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             SLGL+L+  TRV ++EP W+  +EEQ I R HR+  T  + +  L +  TVEE++L+  
Sbjct: 795  GSLGLNLTAATRVVILEPFWNPFVEEQAIDRVHRLTQTVDVIIYKLTVTKTVEERILDLQ 854

Query: 1112 QDTDRCRRLLKEELVK 1127
            +     +RLL E+ ++
Sbjct: 855  EK----KRLLAEQAIE 866


>gi|424903729|ref|ZP_18327242.1| helicase, Snf2 family protein [Burkholderia thailandensis MSMB43]
 gi|390931602|gb|EIP89003.1| helicase, Snf2 family protein [Burkholderia thailandensis MSMB43]
          Length = 841

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 1/142 (0%)

Query: 971  TNTFLKQDLYRPNLESNKALPD-KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSN 1029
            T+  +K D      ES  A P+ K ++FSQ+     ++ ++L   GI +   +  + S+ 
Sbjct: 532  TDHGVKADELATLFESLFAQPEAKAVVFSQWTRTHEIVIRRLKKLGIGYVSFHGGVPSAR 591

Query: 1030 KIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGAT 1089
            +   L+ FR D  C   L   + S GL+L   + +  M+  W+ ++ EQ I+R HRMG  
Sbjct: 592  RPALLERFRDDPDCRVFLSTDAGSTGLNLQHASTLVNMDLPWNPAVLEQRIARIHRMGQR 651

Query: 1090 RPIHVETLAMRGTVEEQMLEFL 1111
            +P+ +     +GT+EE ML  L
Sbjct: 652  KPVRIINYVAKGTIEEGMLSVL 673


>gi|156034667|ref|XP_001585752.1| hypothetical protein SS1G_13268 [Sclerotinia sclerotiorum 1980]
 gi|154698672|gb|EDN98410.1| hypothetical protein SS1G_13268 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1092

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 69/119 (57%), Gaps = 3/119 (2%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHS-SNKIKSLDMFRHDASCLALLMD- 1049
            +K+I+F +     + I Q L    ++   +YS   S S + K +  F    +   +LMD 
Sbjct: 887  EKIIVFYEAENVGYYIAQALKCMNVEHL-LYSKRDSTSERSKCVVKFNSLPNFRVMLMDV 945

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              A+ GLD+S  +RV+ + P++   +EEQ I RAHR+G   P+HVETL ++G++EE +L
Sbjct: 946  NQAAFGLDMSAASRVYFVNPVFSPQIEEQAIKRAHRIGQLHPVHVETLVLKGSIEEVIL 1004


>gi|257094070|ref|YP_003167711.1| Non-specific serine/threonine protein kinase [Candidatus
            Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046594|gb|ACV35782.1| Non-specific serine/threonine protein kinase [Candidatus
            Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 1400

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 67/118 (56%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++ + V+ + L  +G+ +  +     ++ + + +  F+     L L+   + 
Sbjct: 1250 KALVFSQFVDFLQVLREPLDESGVHYQYLDGATPAAERSRRVAAFQAGEGDLFLISLKAG 1309

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+    V + +P W+ + E+Q + RAHR+G  RP+ V  L  RGTVEE++++ 
Sbjct: 1310 GFGLNLTAADYVVITDPWWNPAAEDQAMGRAHRIGQLRPVTVYRLVTRGTVEERIVDL 1367


>gi|449464954|ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Cucumis sativus]
          Length = 1015

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 82/153 (53%), Gaps = 4/153 (2%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K I+FSQ+   + ++E  L  A I++  +   M   ++ +++  F  D     +LM  
Sbjct: 860  PVKTIVFSQWTSMLDLVELSLNEACIQYRRLDGTMSLVSRDRAVKDFNSDPEISVMLMSL 919

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             + +LGL++     V L++  W+ + E+Q + RAHR+G TRP+ V  + ++ TVE+++L 
Sbjct: 920  KAGNLGLNMVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRITVKDTVEDRILA 979

Query: 1110 FLQDTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
              ++    R+++     + +  G+ S  T+ D 
Sbjct: 980  LQEEK---RKMVASAFGEDQSGGSASRLTVEDL 1009



 Score = 45.4 bits (106), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 49/224 (21%), Positives = 83/224 (37%), Gaps = 59/224 (26%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLSA 673
            TL+V P+ ++  W  ++   V    +L + ++    +         YDVV+TT+  ++ 
Sbjct: 369 GTLVVCPASILRQWARELDDKVPEEKKLSVLIYHGGSRTRDPDELAKYDVVLTTYAIVTN 428

Query: 674 E-------------------WG---------RRKKS-----------------------P 682
           E                   +G         +RKK+                       P
Sbjct: 429 EVPKQPLVDEDDGEEKNGDRYGLSSDFSVNKKRKKTSTSSKKGKKGRKGTGISFECDSGP 488

Query: 683 MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPM 742
           + +V W RV+LDE  T+ +  + T   +   SL A  RW L+GTP  N     +  L   
Sbjct: 489 LARVGWFRVILDEAQTIKN--HRTQVARACCSLRAKRRWCLSGTPIQNA----IDDLYSY 542

Query: 743 LKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMI 786
            +FL  + Y    K++   I  P       G  +L  +L   M+
Sbjct: 543 FRFLRYDPYAV-YKSFYHTIKVPISRNSVTGYKKLQAVLRAIML 585


>gi|359484139|ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Vitis vinifera]
          Length = 1013

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 84/153 (54%), Gaps = 4/153 (2%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K I+FSQ+   + ++E  +  + I++  +   M  +++ +++  F  D     +LM  
Sbjct: 858  PIKAIVFSQWTSMLDLVEMSMNHSCIQYRRLDGTMSLASRDRAVKDFNTDPEVTVMLMSL 917

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             + +LGL++   + V L++  W+ + E+Q + RAHR+G TRP+ V  + ++ TVE+++L 
Sbjct: 918  KAGNLGLNMVAASLVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRITIKDTVEDRILA 977

Query: 1110 FLQDTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
              +D    R+++     + +  G+ +  T+ D 
Sbjct: 978  LQEDK---RKMVASAFGEDQTGGSATRLTVEDL 1007



 Score = 47.8 bits (112), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 19/152 (12%)

Query: 682 PMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQP 741
           P+ +V W RV+LDE  T+ +  + T   +   SL A  RW L+GTP  N     +  L  
Sbjct: 517 PLARVGWFRVILDEAQTIKN--HRTQVARACCSLRAKRRWCLSGTPIQNA----IDDLYS 570

Query: 742 MLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK------TDLQT 795
             +FL  + Y    K++   I  P       G  +L  +L   M+   K      T +  
Sbjct: 571 YFRFLKYDPYAV-YKSFYNTIKVPISRNSVHGYKKLQAVLRAIMLRRTKGTLIDGTPIIN 629

Query: 796 IP---LCIKEVTFLNFTEEHAGTYNELVVTVR 824
           +P   +C+ +V   +F+ E    Y++L    R
Sbjct: 630 LPPKTICLSKV---DFSSEERAFYSKLEADSR 658


>gi|325110937|ref|YP_004272005.1| SNF2-related protein [Planctomyces brasiliensis DSM 5305]
 gi|324971205|gb|ADY61983.1| SNF2-related protein [Planctomyces brasiliensis DSM 5305]
          Length = 1120

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 3/139 (2%)

Query: 976  KQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLD 1035
            K D+   +LE   A   K ++FSQF   + +++  L  A I +  +Y    + ++   + 
Sbjct: 955  KLDVLTEHLEELIAENHKTLVFSQFTSLLAIVKNHLDKANIPY--VYLDGSTKDRDAVVQ 1012

Query: 1036 MFRHDASCLALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHV 1094
             F++D      L+   +  LGL+L+    VFL++P W+ ++E Q I RAHR+G TR +  
Sbjct: 1013 TFQNDKDIPVFLISLKAGGLGLNLTAADYVFLLDPWWNPAVEAQAIDRAHRVGQTRNVIA 1072

Query: 1095 ETLAMRGTVEEQMLEFLQD 1113
              L  RGT+EE++ E  Q+
Sbjct: 1073 YRLIARGTIEEKIAELQQN 1091


>gi|297742732|emb|CBI35366.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 84/153 (54%), Gaps = 4/153 (2%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P K I+FSQ+   + ++E  +  + I++  +   M  +++ +++  F  D     +LM  
Sbjct: 752  PIKAIVFSQWTSMLDLVEMSMNHSCIQYRRLDGTMSLASRDRAVKDFNTDPEVTVMLMSL 811

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             + +LGL++   + V L++  W+ + E+Q + RAHR+G TRP+ V  + ++ TVE+++L 
Sbjct: 812  KAGNLGLNMVAASLVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRITIKDTVEDRILA 871

Query: 1110 FLQDTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
              +D    R+++     + +  G+ +  T+ D 
Sbjct: 872  LQEDK---RKMVASAFGEDQTGGSATRLTVEDL 901



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 108/261 (41%), Gaps = 45/261 (17%)

Query: 599 LALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHV-RPGQLHLFVWTDHKKPSAHSL 657
           +AL +   S++   +  TL+V P+ ++  W  ++ + V    +L + ++    +      
Sbjct: 320 IALIQMQKSLQRRPAAGTLVVCPASVLRQWARELDEKVSEEAKLSVCLYHGGSRTKDPVE 379

Query: 658 AWDYDVVITTFNRLSAEW---------------GRRKK----------SPMMQVHWLRVM 692
              YDVV+TT++ ++ E                G +K            P+ +V W RV+
Sbjct: 380 LAKYDVVLTTYSIVTNEVPKQPLVDDDEGDERNGEKKGIDSSSIDYDCGPLARVGWFRVI 439

Query: 693 LDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYG 752
           LDE  T+ +  + T   +   SL A  RW L+GTP  N     +  L    +FL  + Y 
Sbjct: 440 LDEAQTIKN--HRTQVARACCSLRAKRRWCLSGTPIQNA----IDDLYSYFRFLKYDPYA 493

Query: 753 QNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARK------TDLQTIP---LCIKEV 803
              K++   I  P       G  +L  +L   M+   K      T +  +P   +C+ +V
Sbjct: 494 V-YKSFYNTIKVPISRNSVHGYKKLQAVLRAIMLRRTKGTLIDGTPIINLPPKTICLSKV 552

Query: 804 TFLNFTEEHAGTYNELVVTVR 824
              +F+ E    Y++L    R
Sbjct: 553 ---DFSSEERAFYSKLEADSR 570


>gi|392569863|gb|EIW63036.1| hypothetical protein TRAVEDRAFT_56219 [Trametes versicolor
           FP-101664 SS1]
          Length = 1255

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 30/178 (16%)

Query: 585 KTLDNLAFDLAALRLALCEPLDSVRLYLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLF 644
           KTL  +A  LA        PLD      S +TLIVVP  ++ +W+ QI+ HV+P  L   
Sbjct: 523 KTLTMIALVLAT---KSDTPLDH-----SDSTLIVVPLSVMSNWEKQIEDHVKPNTLSYC 574

Query: 645 VWTDHKKPSAHSLAWDYDVVITTFNRLS------------AEWGRRKK--SPMMQVHWLR 690
           V+    +    +    YDVVITT+  ++            A   +++K  + +  V W R
Sbjct: 575 VYYGKNRSLTPAELKRYDVVITTYQTVALEHDLGASSKGGAPAAKKQKVDNALFDVAWKR 634

Query: 691 VMLDEGHTLGSSLNLTNKLQMAI-SLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLH 747
           ++LDEGH +    N   K+  A+ +L A  RW+LTGTP  N+P      L  +L FL 
Sbjct: 635 IILDEGHII---RNPRTKMAKAVCALPAQRRWVLTGTPIINSPKD----LGSILTFLR 685



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 10/100 (10%)

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + +LGL+L+    V+LM+P W   +E Q I R +R+G T+P+HV  L    TVE +++E 
Sbjct: 1133 AGALGLNLTVANNVYLMDPWWQEGIESQAIDRCNRIGQTKPVHVYQLIAEDTVESKVIEI 1192

Query: 1111 LQDTDRCRRLLKEELV-------KPEREGARSHRTLHDFA 1143
                ++ ++L++E          + +++ AR    +H F 
Sbjct: 1193 ---QEKKKKLVQEAFAGIKNAETQRQKKEARLQELVHLFG 1229


>gi|402086269|gb|EJT81167.1| DNA repair protein RAD5 [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 1146

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFR-HDASCLALLMDGS 1051
            K ++FSQF   + ++E  L  A ++F  +   M    +   LD FR  D   + LL   +
Sbjct: 996  KSVVFSQFTSFLSLLEPALARARVRFLRLDGTMAQRARAAVLDEFRASDRFTVLLLSLRA 1055

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +GL+L    RV++M+P W  ++E Q I R HRMG  + + V  L + G+VEE+ML
Sbjct: 1056 GGVGLNLVDAKRVYMMDPWWSFAVEAQAIDRVHRMGQDQEVKVYRLIVSGSVEERML 1112



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 35/268 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK------------PSAHSLAWDYDV 663
           TL++ P  L+  W+++ ++  + G +   ++   +K             +   L   Y V
Sbjct: 554 TLVIAPMSLLSQWQSETEKASKEGTMKSMLYYGSEKNIDLQALCCNPATAPDVLITSYGV 613

Query: 664 VITTFNRLSAEWGRRK-KSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWL 722
           V++ F++L+A    R     +  VH+ RV+LDE H + +  + T K      L+  +RW+
Sbjct: 614 VLSEFSQLAARNSNRDGHHGLFSVHFFRVILDEAHNIKNRQSKTAK--ACYDLSTDHRWV 671

Query: 723 LTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLH 782
           LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE++       ++Q + 
Sbjct: 672 LTGTPIVN----RLEDLFSLVRFLRVEPWS-NFSFWRTFITVPFESKNFMRALDVVQTVL 726

Query: 783 RCMISARKTDLQT------IPLCIKEVTFLN--FTEEHAGTYNELVVTVRRNILMADWND 834
             ++  R  +++T      +PL  K +  +N   +E+    Y+ ++   R          
Sbjct: 727 EPLVMRRTKEMRTPSGELLVPLPPKTIEIVNVELSEQERAVYDHIIQRARNAF------- 779

Query: 835 PSHVESLLNPKQWKFRSTTIRNLRLSCC 862
             +VE+    K +      I  LR SCC
Sbjct: 780 QENVEAGTVMKAYTSIFLQILRLRQSCC 807



 Score = 47.0 bits (110), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 18/107 (16%)

Query: 165 LKLFPHQQAAVEWMLHREWNA-----EVLRHPLYIDLA-------------TEDGFYFYV 206
           ++L P+Q+ ++ WML +E +      E+  HPL+ +               T     FY+
Sbjct: 415 MELRPYQKQSLHWMLSKERDEGSSERELSMHPLWEEYQWPTKDFDDRDVPQTAGQPNFYI 474

Query: 207 NTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLILKTQGTLA 253
           N  SG+++       +   GG+  DE GLGKTI  LSLI   +  +A
Sbjct: 475 NPYSGELSLEFPAQEQHCLGGILADEMGLGKTIQMLSLIHTHRSKMA 521


>gi|452986094|gb|EME85850.1| hypothetical protein MYCFIDRAFT_130964 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 1128

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + ++   LT A I++      M    + K L+ F +      LL+   A
Sbjct: 978  KSVVFSQFTSFLDLLAPALTGANIQWLRFDGSMTQKERAKVLNEFANRPKFTILLLSLRA 1037

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RV++M+P W  ++E Q I R HRMG T  + V+   + G++EE+ML+
Sbjct: 1038 GGVGLNLTCAKRVYMMDPWWSFALEAQAIDRVHRMGQTEEVEVKRFIVEGSIEEKMLK 1095



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 38/271 (14%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK--------------PSAHSLAWDY 661
           TL+V P  L+  W ++ ++  + G L + V+  ++K               + + +   Y
Sbjct: 549 TLVVAPMSLLAQWASEAEKASKAGSLKVLVYYGNEKGVNLQTICCGSNISSAPNVIITSY 608

Query: 662 DVVITTFNRLSAEWGRRKKSP--MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASN 719
            VV++ FN +++  G  + S   +  V + R++LDE H + +  + T K      L A++
Sbjct: 609 GVVLSEFNSVASTLGGNRASSGGLFGVEYWRIILDEAHMIKNRQSKTAK--ACYELAATH 666

Query: 720 RWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQ 779
           RW+LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE         ++Q
Sbjct: 667 RWVLTGTPIVN----RLEDLFSLVRFLRVEPWS-NFSFWKTFITIPFEKGEFVRALDVVQ 721

Query: 780 LLHRCMISARKTDLQT------IPLCIK--EVTFLNFTEEHAGTYNELVVTVRRNILMAD 831
            +   ++  R  D++T      +PL  +  +V  +  ++     Y  +    RR      
Sbjct: 722 TVLEPLVLRRTKDMKTPSGEALVPLPNRTIDVEKIKLSDPERDVYEHIYTRARRT----- 776

Query: 832 WNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
           +N      +L+  K +      I  LR SCC
Sbjct: 777 FNHNLEAGTLM--KSYTTIFAQILRLRQSCC 805



 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 18/99 (18%)

Query: 165 LKLFPHQQAAVEWMLHREW-----NAEVLRHPLY------------IDLATEDG-FYFYV 206
           + L  +Q+ A+ WML++E      + +   HPL+             DL   DG   FYV
Sbjct: 409 MDLRKYQKQALHWMLNKETREKDEHKQQSMHPLWEQYSWPTKDAEDKDLPDVDGQEMFYV 468

Query: 207 NTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
           N  SG+++       +   GG+  DE GLGKTI  LSL+
Sbjct: 469 NPYSGEMSLDFPVQEQTCLGGILADEMGLGKTIEMLSLV 507


>gi|296809774|ref|XP_002845225.1| DNA repair protein rad5 [Arthroderma otae CBS 113480]
 gi|238842613|gb|EEQ32275.1| DNA repair protein rad5 [Arthroderma otae CBS 113480]
          Length = 1178

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 37/274 (13%)

Query: 611 YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW--TDHKKPSAHSL-----AWDYDV 663
           Y  R TL+V P+ L+  W+++  +  +PG +   V+  TD K  +  SL     +   +V
Sbjct: 542 YAPRTTLVVAPTSLLSQWESEALKASKPGTMRTLVYYGTD-KSVNLRSLCSPKNSAAPNV 600

Query: 664 VITTFNRLSAEWGR-------RKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLT 716
           +IT++  + +E+G+          + +  V + RV+LDE H + +  + T K      + 
Sbjct: 601 IITSYGVVRSEYGQVISNRTNTSDNGLFSVEYFRVILDEAHYIKNRASKTAK--ACYEIK 658

Query: 717 ASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSR 776
           A +RW+LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE++       
Sbjct: 659 AKHRWVLTGTPIVN----RLEDLYSLVRFLKVEPWC-NFSFWKTFITVPFESKDFARALS 713

Query: 777 LLQLLHRCMISARKTDLQT------IPLCIKEVTF--LNFTEEHAGTYNELVVTVRRNIL 828
           ++Q +   ++  R   ++T      +PL  + +T   +  +E+    Y+ +    +R   
Sbjct: 714 VVQTVLEPLVLRRTKTMKTPEGEALVPLPSRTITVEEVELSEQEREIYDVIFSRAKRT-- 771

Query: 829 MADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
              +ND     +LL  K +      I  LR +CC
Sbjct: 772 ---FNDNVAAGTLL--KSYTTIFAQILRLRQTCC 800



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 33/149 (22%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGI---KFAGMYSPMHSSNKIKSLDM------------- 1036
            K ++FSQF   + +I  QLT AGI   +F G  S    +  +   +              
Sbjct: 991  KAVVFSQFTSFLDLISPQLTAAGIAHLRFDGTMSQKARATVLAQFNAPIIDEEDIEDDDD 1050

Query: 1037 -------FRHDAS----------CLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQV 1079
                   FR   S           + L+   +  +GL+L+    VF+M+P W  ++E Q 
Sbjct: 1051 IANSPGPFRSYRSKPKKEKTPPANVLLISLRAGGVGLNLTVANHVFMMDPWWSFAVEAQA 1110

Query: 1080 ISRAHRMGATRPIHVETLAMRGTVEEQML 1108
            I R HRMG  R + V    ++ ++E ++L
Sbjct: 1111 IDRVHRMGQLRDVKVSRFVVKNSIEGRIL 1139



 Score = 43.5 bits (101), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 17/123 (13%)

Query: 140 IDLVRIAATCRHLRCLAASIMPCMKLKLFPHQQAAVEWMLHREWNAEVLR----HPLYID 195
           +D +   A C       A+      L+L  +Q+ A+ W++ +E +    +    HPL+ +
Sbjct: 388 LDTLYHKAQCFDFSMPEATPGESFNLELRKYQKQALYWLITKEKDEMSTKQRSMHPLWEE 447

Query: 196 LA-------------TEDGFYFYVNTVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITAL 242
                               +FYVN  SG+++       ++  GG+  DE GLGKTI  +
Sbjct: 448 YPWPVKDVDDKPLPRVRGNDFFYVNPYSGELSLEFPVQEQNCLGGILADEMGLGKTIEMM 507

Query: 243 SLI 245
           SLI
Sbjct: 508 SLI 510


>gi|225683923|gb|EEH22207.1| DNA repair protein RAD5 [Paracoccidioides brasiliensis Pb03]
          Length = 1239

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 2/128 (1%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P+K IIFSQF   + ++E  +   G  +      M+ + + +++  F     C  +L+  
Sbjct: 1082 PEKTIIFSQFTSLLDLLEVPILRKGWGYRRYDGSMNPNQRNEAVMKFTDSKDCTIMLVSL 1141

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             + + GL+L   ++V + +P W+  +EEQ I RAHR+G  RP+ V  + ++ TVE+++L+
Sbjct: 1142 KAGNAGLNLVAASQVIIFDPFWNPYIEEQAIDRAHRIGQVRPVVVHRILVKNTVEDRILD 1201

Query: 1110 FLQDTDRC 1117
             LQ+  R 
Sbjct: 1202 -LQEKKRA 1208



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 41/240 (17%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           +  LI+ P  LV  WK +I++ ++P  QL +FV  + K+   +S    YDVV+TT+  L+
Sbjct: 583 KTNLIIAPVALVQQWKREIERMIKPRHQLKVFVLHNGKRNVPYSTLKTYDVVLTTYGTLA 642

Query: 673 AEWGRRKKSPMMQV-----------------------HWLRVMLDEGHTLGSSLNLTNKL 709
           AE+ R++ +  +++                        W RV+LDE   + +    T   
Sbjct: 643 AEFKRKEFADRIKIDNPHTYQNLPADAINLPLLGEASKWYRVILDEAQCIKNK--DTKSA 700

Query: 710 QMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE 769
           +    L +  RW ++GTP  N     +  L  ++KFL  + Y  N + ++    RP ++ 
Sbjct: 701 RACYQLHSIYRWCMSGTPMMNN----VLELFSLIKFLRIKPY-HNIETFNTIFARPLKSG 755

Query: 770 MEEGRSRLLQLLHRCM--ISARKTDLQTI--------PLCIKEVTFLNFTEEHAGTYNEL 819
           +E  ++R ++ L   +  I  R+T    I        P    E T+  F+E+    Y  L
Sbjct: 756 VEHLQNRAMEKLQALLKAILLRRTKRSKIDGKQILQLPPRTTEKTYAVFSEDEQTLYRAL 815


>gi|429849447|gb|ELA24838.1| DNA repair protein rad5 [Colletotrichum gloeosporioides Nara gc5]
          Length = 1160

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 1/117 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + +IE  L  A IKF  +   M    +   L+ F+   +   LL+   A
Sbjct: 1010 KSVVFSQFTSFLTLIEPALERANIKFLRLDGTMAQKARAAVLNEFQDSKTFTVLLISLRA 1069

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +GL+L+   RV++M+P W  ++E Q I R HRMG    + V      GTVEE+ML
Sbjct: 1070 GGVGLNLTSAKRVYMMDPWWSFAVEAQAIDRVHRMGQEDEVKVYRFICHGTVEERML 1126



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPS-------AHSLAWDYDVVITT- 667
           TL+V P  L+  W+++ ++  + G L   V+  ++K S         S A   DVVIT+ 
Sbjct: 582 TLVVAPMSLLAQWQSEAEKASKEGTLKAIVYYGNEKASNLQAMCCEASAASAPDVVITSY 641

Query: 668 ------FNRLSAEWGRRKK-SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
                 FN+++A+ G +   + +  +++ RV+LDE H + +  + T K    IS  A +R
Sbjct: 642 GVVLSEFNQVAAKKGNKSDHTGLFSLNFFRVILDEAHHIKNRQSKTAKACYEIS--AEHR 699

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W+LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE++       ++Q 
Sbjct: 700 WVLTGTPIVN----KLEDLFSLVRFLRVEPWN-NFSFWKTFITVPFESKDFMRALDVVQT 754

Query: 781 LHRCMISARKTDLQT------IPLCIK--EVTFLNFTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R  D++T      +PL  K  E+  +   E     Y+ +    +++      
Sbjct: 755 VLEPLVLRRTKDMKTPDGEPLVPLPPKHVEIVDVELGETEREIYDYIFTRAKQSFR---- 810

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
               +VE+    K +      I  LR SCC
Sbjct: 811 ---ENVEAGTVMKAFTSIFANILRLRQSCC 837



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 17/98 (17%)

Query: 165 LKLFPHQQAAVEWMLHREW----NAEVLRHPLYIDLA-------------TEDGFYFYVN 207
           + L  +Q+ A+ WM+ +E     N E   HPL+ + A              +D  +FYVN
Sbjct: 444 MDLRSYQKQALYWMMTKEKDLKSNREPSMHPLWEEYAWPLKDTDDKDLPQVQDQQHFYVN 503

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             SGD++       ++  GG+  DE GLGKTI  LSL+
Sbjct: 504 PYSGDMSLDFPVQEQNCLGGILADEMGLGKTIQMLSLV 541


>gi|85860994|ref|YP_463196.1| swf/snf family helicase [Syntrophus aciditrophicus SB]
 gi|85724085|gb|ABC79028.1| swf/snf family helicase [Syntrophus aciditrophicus SB]
          Length = 1407

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 11/151 (7%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF+ H+ +I+  L   GI++  +        + + ++ F+     L L+   + 
Sbjct: 1257 KALVFSQFVSHLALIQDYLKQKGIEYRYLDGGTPPKERRREVEAFQAGKGSLFLISLRAG 1316

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE--- 1109
             +GL+L+    V  M+P W+ ++E+Q   RAHR+G  RP+ V  L  + T+EE++L+   
Sbjct: 1317 GVGLNLTAADFVIHMDPWWNPAVEDQASDRAHRIGQKRPVTVYRLVTKNTIEEKILKLHA 1376

Query: 1110 --------FLQDTDRCRRLLKEELVKPEREG 1132
                     L  +D   R+  +EL +  REG
Sbjct: 1377 SKRDLADSLLDGSDISGRMSADELFQLIREG 1407


>gi|449530099|ref|XP_004172034.1| PREDICTED: DNA repair protein rad5-like, partial [Cucumis sativus]
          Length = 379

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 82/153 (53%), Gaps = 4/153 (2%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG 1050
            P K I+FSQ+   + ++E  L  A I++  +   M   ++ +++  F  D     +LM  
Sbjct: 224  PVKTIVFSQWTSMLDLVELSLNEACIQYRRLDGTMSLVSRDRAVKDFNSDPEISVMLMSL 283

Query: 1051 SA-SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             A +LGL++     V L++  W+ + E+Q + RAHR+G TRP+ V  + ++ TVE+++L 
Sbjct: 284  KAGNLGLNMVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRITVKDTVEDRILA 343

Query: 1110 FLQDTDRCRRLLKEELVKPEREGARSHRTLHDF 1142
              ++    R+++     + +  G+ S  T+ D 
Sbjct: 344  LQEEK---RKMVASAFGEDQSGGSASRLTVEDL 373


>gi|226293312|gb|EEH48732.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 1234

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 2/128 (1%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P+K IIFSQF   + ++E  +   G  +      M+ + + +++  F     C  +L+  
Sbjct: 1077 PEKTIIFSQFTSLLDLLEVPILRKGWGYRRYDGSMNPNQRNEAVMKFTDSKDCTIMLVSL 1136

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             + + GL+L   ++V + +P W+  +EEQ I RAHR+G  RP+ V  + ++ TVE+++L+
Sbjct: 1137 KAGNAGLNLVAASQVIIFDPFWNPYIEEQAIDRAHRIGQVRPVVVHRILVKNTVEDRILD 1196

Query: 1110 FLQDTDRC 1117
             LQ+  R 
Sbjct: 1197 -LQEKKRA 1203



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 41/240 (17%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           +  LI+ P  LV  WK +I++ ++P  QL +FV  + K+   +S    YDVV+TT+  L+
Sbjct: 578 KTNLIIAPVALVQQWKREIERMIKPRHQLKVFVLHNGKRNVPYSTLKTYDVVLTTYGTLA 637

Query: 673 AEWGRRKKSPMMQV-----------------------HWLRVMLDEGHTLGSSLNLTNKL 709
           AE+ R++ +  +++                        W RV+LDE   + +    T   
Sbjct: 638 AEFKRKEFADRIKIDNPHTYQNLPADAVNLPLLGEASKWYRVILDEAQCIKNK--DTKSA 695

Query: 710 QMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE 769
           +    L +  RW ++GTP  N     +  L  ++KFL  + Y  N + ++    RP ++ 
Sbjct: 696 RACYQLHSIYRWCMSGTPMMNN----VLELFSLIKFLRIKPY-HNIETFNTIFARPLKSG 750

Query: 770 MEEGRSRLLQLLHRCM--ISARKTDLQTI--------PLCIKEVTFLNFTEEHAGTYNEL 819
           +E  ++R ++ L   +  I  R+T    I        P    E T+  F+E+    Y  L
Sbjct: 751 VEHLQNRAMEKLQALLKAILLRRTKRSKIDGKQILQLPPRTTEKTYAVFSEDEQTLYRAL 810


>gi|3702846|gb|AAC64044.1| RNA polymerase II termination factor [Homo sapiens]
          Length = 1162

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 29/155 (18%)

Query: 611 YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + S  TLI+ P+ L+ HWK ++++ V   +L ++++    + S   +   YD+VITT++ 
Sbjct: 639 FTSHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYRGPNRDSRARVLSTYDIVITTYSL 698

Query: 671 LSAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS 714
           ++ E    K+               +P++++ W R++LDE H      N+ N ++Q +I+
Sbjct: 699 VAKEIPTNKQEAEIPGANLNVEGTSTPLLRIAWARIILDEAH------NVKNPRVQTSIA 752

Query: 715 ---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
              L A  RW +TGTP  N     L  +  +LKFL
Sbjct: 753 VCKLQACARWAVTGTPIQNN----LLDMYSLLKFL 783



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 15/153 (9%)

Query: 973  TFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIHVIEQQLTVAGIKF 1018
            TF K +L+    ES K              +   K +I SQ+   + V+   L   G+ +
Sbjct: 977  TFFKMELFEGMRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTY 1036

Query: 1019 AGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-SASLGLDLSFVTRVFLMEPIWDRSMEE 1077
            A +   ++   ++  ++ F H      +L+   +  +GL+L+    +FL++  W+ S+E+
Sbjct: 1037 ATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLED 1096

Query: 1078 QVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1097 QACDRIYRVGQQKDVVIHRFVCEGTVEEKILQL 1129


>gi|238482351|ref|XP_002372414.1| helicase, putative [Aspergillus flavus NRRL3357]
 gi|220700464|gb|EED56802.1| helicase, putative [Aspergillus flavus NRRL3357]
          Length = 941

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 16/211 (7%)

Query: 613 SRATLIVVPS-YLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           +RATL++VPS  L++ W+ +I  H+  G + +  +    +    S    YD+VITT+N L
Sbjct: 415 TRATLVIVPSRVLINTWEREIDDHLNAG-IKMMRYHGRSRKDLISNIDRYDIVITTYNTL 473

Query: 672 SAEWGRR----KKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTP 727
           + E   +     +SP+    W RV+LDE H +      T   +  + L A +RW L+GTP
Sbjct: 474 AKEHDAKILGKGQSPLHDFAWYRVVLDEAHMI--RRRSTTFHRAVVELRAKSRWCLSGTP 531

Query: 728 TPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF--EAEMEEGRSRLLQLLHRCM 785
             N+    L  L  +L F+  + +  + + +   I  PF   A   +   RL  LL    
Sbjct: 532 IQNS----LGDLGSLLAFIQLKPF-HDPRNFSHWIANPFGVRATKRKAIERLTHLLEAVC 586

Query: 786 ISARKTDLQTIPLCIKEVTFLNFTEEHAGTY 816
           +  R  +   +P    E+  + FT E    Y
Sbjct: 587 LR-RTIERVDLPGQRSEIRLVQFTPEERAKY 616



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 1/116 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K IIFS +   + +I + L  + I+F  +     +S + K LD F    +   L+M  G+
Sbjct: 789  KSIIFSCWTRTLDLIAKHLKASRIEFERIDGKTSTSQRQKILDRFDGTRTVPVLIMTTGT 848

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQM 1107
             + GL+L  V RVF++EP W+ S+E Q I+RA R+G  + + V    +  ++EE M
Sbjct: 849  GAFGLNLQSVNRVFIVEPQWNPSVESQAIARAIRLGQEQQVLVTRYRVENSIEEAM 904


>gi|169602036|ref|XP_001794440.1| hypothetical protein SNOG_03896 [Phaeosphaeria nodorum SN15]
 gi|160706060|gb|EAT89101.2| hypothetical protein SNOG_03896 [Phaeosphaeria nodorum SN15]
          Length = 1444

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 169/415 (40%), Gaps = 81/415 (19%)

Query: 613 SRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVW----------TDHKKPSAHSLAWDYD 662
           S ATLI+ P  +++ W ++I  H    +L +F +           DH   +  +L   +D
Sbjct: 403 SGATLIITPPSILEQWISEIHTHA--PELKVFHYRGLPPSSAPKKDHTAATVENL-LKFD 459

Query: 663 VVITTFNRLSAEWG----------------RRKKSPMMQVHWLRVMLDEGHTLGSSLNLT 706
           VV+TT+N LS E                   R+KSP++++ W RV LDE   + S ++  
Sbjct: 460 VVLTTYNVLSKEIHHATPPPDRSLRNLKRHERRKSPLVEISWWRVCLDEAQMIESGVSQA 519

Query: 707 NKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF 766
            K+   I     N W ++GTP        +  L+ +L FL  +A+  N+  WD       
Sbjct: 520 AKVARIIP--RCNAWAVSGTPL----RKDVQDLRGLLVFLRCDAFANNKAVWD------- 566

Query: 767 EAEMEEGRSRLLQLLHRCMISARKTDLQTIPLCIKEVTFLNFTEEHAGTYNELVVTV--- 823
             + E  RS   Q+  R      + +L+ +P   + V  + FT      YN+LV  +   
Sbjct: 567 RLDKESFRSIFKQIAMRHTKDQIREELR-LPPQKRVVITVPFTTIEEQNYNDLVRQMCDA 625

Query: 824 ----RRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCCVAGHIKVTD-------- 871
                  + + D +D SH E +   + W  R      LR +C  A H+   +        
Sbjct: 626 CWLTPEGLPLDDGHDASHPEVIDRMRDWLVR------LRQTCLHA-HVGRKNRKALGAKN 678

Query: 872 -AGEDIQETMDVLVE-NGLDPLSQEYAFIKYNLLNGGNCLRHILCLDCVAMDSEKCSLPG 929
            A   + E ++V++E N  +  S+    I   +  G     H++       D  + +LP 
Sbjct: 679 GALRTVHEVLEVMIEQNDTNYKSESREMILQQIKLG-----HLMAYAGSVHDRAQQALP- 732

Query: 930 CGFLYEMQSPEI-----LTRPENPNPKWPVPQDLIELQPSYRQWSNTNTFLKQDL 979
               YE    E      + R E    K  + +  I L+P+  +  N++    +DL
Sbjct: 733 ---YYEEALKEAKFYVEICRKEIAAEKEKLDKGTISLEPASLKDENSDIEDGKDL 784



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 12/129 (9%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-S 1051
            K IIFSQF + + V+ + L    I  +G+          + +  F+ DA     L+D  S
Sbjct: 1226 KSIIFSQFGDFLEVLREALRKWRIGVSGIIDK-------EGIQRFKSDAGIECFLLDAKS 1278

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S GL+L   T VFL EP+ + ++E Q I+R HR+G  RP  V    +  TVEE +    
Sbjct: 1279 DSSGLNLVNATYVFLCEPLINPAIELQAIARVHRIGQQRPTTVFMYLISDTVEEAIY--- 1335

Query: 1112 QDTDRCRRL 1120
             D    RRL
Sbjct: 1336 -DISVARRL 1343


>gi|452845325|gb|EME47258.1| hypothetical protein DOTSEDRAFT_77621 [Dothistroma septosporum
           NZE10]
          Length = 1150

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 39/285 (13%)

Query: 603 EPLDSVRLYLSRAT-LIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK---------- 651
           +P++S  +  + AT L+V P  L+  W ++ ++  +PG L + V+   +K          
Sbjct: 529 QPMNSSTIKRAPATTLVVAPMSLLAQWASEAEKASKPGTLKVLVYYGSEKGVNLQTICSG 588

Query: 652 ----PSAHSLAWDYDVVITTFNRLSAEWG--RRKKSPMMQVHWLRVMLDEGHTLGSSLNL 705
                + + +   Y VV++ FN +++  G  R     +  V + R++LDE H + +  + 
Sbjct: 589 SNISSAPNVIITSYGVVLSEFNSVASALGGNRAASGGLFGVEYWRIILDEAHMIKNRSSK 648

Query: 706 TNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRP 765
           T K      L AS+RW+LTGTP  N    +L  L  +++FL  E +  N   W   I  P
Sbjct: 649 TAK--ACYELAASHRWVLTGTPIVN----RLEDLFSLVRFLRVEPWS-NFSFWKTFITTP 701

Query: 766 FEAEMEEGRSRLLQLLHRCMISARKTDLQT------IPLCIKEVTF--LNFTEEHAGTYN 817
           FE         ++Q +   ++  R  D++T      +PL  K +    +  +      Y+
Sbjct: 702 FEKGEFVRALDVVQTVLEPLVLRRTKDMKTPDGEALVPLPTKTINVEKVKMSTPEQDVYD 761

Query: 818 ELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
            +    RR      +N+     +L+  K +      I  LR SCC
Sbjct: 762 HIFWRARRT-----FNENVSAGTLM--KSYTTIFAQILRLRQSCC 799



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF   + ++   LT AGI +      M    + K L  F        LL+   A
Sbjct: 1000 KSVVFSQFTSFLDLLAPALTDAGISWLRFDGSMAQKERAKVLSEFASRPKFTILLLSLRA 1059

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
              +GL+L+   RVF+M+P W  ++E Q I R HRMG T  + V    + G++EE+ML+
Sbjct: 1060 GGVGLNLTCAKRVFMMDPWWSFAVEAQAIDRVHRMGQTEEVTVTRYIVEGSIEEKMLK 1117



 Score = 45.4 bits (106), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 18/157 (11%)

Query: 107 DSSRVKPEDNSCSTGISDIADDIVISILTRLGPIDLVRIAATCRHLRCLAASIMPCMKLK 166
           D S+ KP  +  + G S  +++           +D +   A         A       + 
Sbjct: 345 DGSKRKPSQDKENGGSSPPSEENEEGEELEQDQLDSLYKKAQSFDFNTPEAQPASTFTMN 404

Query: 167 LFPHQQAAVEWMLHREWNAEVLR-----HPLYIDLA-------------TEDGFYFYVNT 208
           L  +Q+ A+ WML++E  A+  +     HPL+ + +              E+   FYVN 
Sbjct: 405 LRKYQKQALYWMLNKETRAKEEQKQQSMHPLWEEYSWPTKDAEDKDLPGVENLDKFYVNP 464

Query: 209 VSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
            SG+++       +   GG+  DE GLGKTI  LSL+
Sbjct: 465 YSGELSLEFPVQEQTCLGGILADEMGLGKTIEMLSLV 501


>gi|410614380|ref|ZP_11325424.1| helicase [Glaciecola psychrophila 170]
 gi|410165963|dbj|GAC39313.1| helicase [Glaciecola psychrophila 170]
          Length = 1437

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 65/120 (54%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K +IFSQF+ H+ +I Q +   G  +  +        + KS++ F+     + L+   + 
Sbjct: 1286 KALIFSQFVGHLQLIRQHIEAKGFSYQYLDGSTPQKKRQKSVNAFQSGEGDIFLISLKAG 1345

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
              GL+L+    V  M+P W+ ++EEQ   RAHR+G TRP+ +  L  + T+EE+++   Q
Sbjct: 1346 GSGLNLTAADYVIHMDPWWNPAVEEQASDRAHRIGQTRPVTIYRLIAQNTIEEKIVALHQ 1405



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 18/180 (10%)

Query: 599  LALCEPLDSVRLYLSRA----TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDH--KKP 652
            + L + L ++ + LSRA    +L++ P+ +  +W+ +  +      + +F  T +  ++ 
Sbjct: 997  MGLGKTLQALAILLSRAKQGPSLVIAPTSVCFNWQQEALKFAPTLNIKIFADTANTVQRQ 1056

Query: 653  SAHSLAWDYDVVITTFNRLSAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMA 712
               +    +D VI ++  L     +R+   +  VHW  ++ DE   L +   LT + + A
Sbjct: 1057 KLLNELSPFDCVIISYGLL-----QREHEILKGVHWHSIVADEAQALKNP--LTKRTKAA 1109

Query: 713  ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEE 772
            ++L +  + + TGTP  N     L+ L  + +F++    G N K +      P E   EE
Sbjct: 1110 VALKSDFKMITTGTPIENN----LTELWSLFRFINPGLLG-NIKRFGERFSVPIENANEE 1164


>gi|150866404|ref|XP_001385990.2| hypothetical protein PICST_36839 [Scheffersomyces stipitis CBS 6054]
 gi|149387660|gb|ABN67961.2| hypothetical protein PICST_36839 [Scheffersomyces stipitis CBS 6054]
          Length = 1761

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 27/194 (13%)

Query: 953  PVPQDLIE------LQPSYRQWSNTNTFLKQDLYRPNLESNKALPD-KVIIFSQFLEHIH 1005
            P+ +D+I+      L+ SY   S  N  +KQ LY   + S    PD ++++FSQ+ + ++
Sbjct: 1495 PISKDIIDEIQSIKLKQSYS--SKVNMIVKQSLY---IRSQN--PDAQIVVFSQWQDMLY 1547

Query: 1006 VIEQQLTVAGIKFAGMYSPM-------HSSNKIKSLDMF---RHDASCLALLMDGSASLG 1055
            ++      A I + G Y  +           K  S++ F   R+  +C  L     AS G
Sbjct: 1548 ILGTAFKAADISYLGSYGTLTPDIGGGRRIKKYDSVETFKDPRNKITCFLLNAKAQAS-G 1606

Query: 1056 LDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQDTD 1115
            L L   T +FL EP+ + S+E Q ISR HR+G T+P  V   A+  TVEE ++  +  T 
Sbjct: 1607 LTLINATHIFLCEPLVNTSLELQAISRIHRIGQTKPTTVWMFAIENTVEESIV--IMSTG 1664

Query: 1116 RCRRLLKEELVKPE 1129
            +    +K++   PE
Sbjct: 1665 KRLEYMKQQSSTPE 1678


>gi|440715310|ref|ZP_20895857.1| SNF2-like protein [Rhodopirellula baltica SWK14]
 gi|436439654|gb|ELP33068.1| SNF2-like protein [Rhodopirellula baltica SWK14]
          Length = 1176

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 5/153 (3%)

Query: 961  LQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAG 1020
            ++PS   W  T++ L+  L+   +E  +    + ++FSQF++H+ V+   L   GI +  
Sbjct: 997  VEPS---WKGTSSKLQ--LFLSLVEELREGDHRALVFSQFVKHLSVVRAALDERGISYQY 1051

Query: 1021 MYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVI 1080
            +     S  + + +D F++    L L+   +   GL+L+    V  ++P W+ ++E+Q  
Sbjct: 1052 LDGATPSHERQRRVDAFQNGEGDLFLISLKAGGTGLNLTAADYVLHLDPWWNPAVEDQAT 1111

Query: 1081 SRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
             RAHR+G  R + V  L    T+EEQ+L+   D
Sbjct: 1112 DRAHRIGQERAVTVYRLVAERTIEEQILQLHAD 1144


>gi|336119146|ref|YP_004573921.1| helicase [Microlunatus phosphovorus NM-1]
 gi|334686933|dbj|BAK36518.1| putative helicase [Microlunatus phosphovorus NM-1]
          Length = 1120

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 71/118 (60%), Gaps = 2/118 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            + ++FSQF  ++  +E +L  AG++   +Y    ++++   ++ FR   + + L+   + 
Sbjct: 947  RALVFSQFTSYLRRVEARLAEAGLRT--VYLDGGTADRQSVIEEFRAGEADVFLISLRAG 1004

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+     F+++P W+ ++E+Q + RAHR+G TRP+ V  L  +GT+EE+++  
Sbjct: 1005 GFGLNLTEADYCFVLDPWWNPAVEQQAVDRAHRLGQTRPVMVYRLVAQGTIEEKVMAL 1062


>gi|300743764|ref|ZP_07072784.1| SNF2/helicase domain protein [Rothia dentocariosa M567]
 gi|300380125|gb|EFJ76688.1| SNF2/helicase domain protein [Rothia dentocariosa M567]
          Length = 1318

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 2/118 (1%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            +V++FSQF  ++  I ++L   GI +  +Y    + N+ + L  F    + + L+   + 
Sbjct: 1167 RVLVFSQFTGYLRTIAERLQAEGIDY--LYLDGTTRNRPQVLKDFAEGTAPVFLISLKAG 1224

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+     F+M+P W+ + E+Q + R HR+G  R +HV  L   GT+EE++++ 
Sbjct: 1225 GFGLNLTEADHCFIMDPWWNPAAEQQAVDRIHRLGQERDVHVYRLVAEGTIEEKVMDL 1282


>gi|224367136|ref|YP_002601299.1| SWI/SNF helicase family protein [Desulfobacterium autotrophicum HRM2]
 gi|223689852|gb|ACN13135.1| SWI/SNF helicase family protein [Desulfobacterium autotrophicum HRM2]
          Length = 1392

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 81/149 (54%), Gaps = 8/149 (5%)

Query: 978  DLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMF 1037
            D+    LE+N     K ++FSQF+ H+ ++++ L    I +  +     +  + + ++ F
Sbjct: 1230 DMVDELLENNH----KALVFSQFVGHLAILKKFLDAKKISYQYLDGSTRAGQRRERINAF 1285

Query: 1038 RHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETL 1097
            +     L L+   +   GL+L+    V  M+P W+ ++E+Q   RA+R+G TRP+ V  L
Sbjct: 1286 QSGVGELFLISLKAGGFGLNLTAADYVIHMDPWWNPAVEDQASDRAYRIGQTRPVTVYRL 1345

Query: 1098 AMRGTVEEQMLEFLQDTDRCRRLLKEELV 1126
             ++G++EE++L    D  R +R L E L+
Sbjct: 1346 VVKGSIEERIL----DLHREKRDLAESLL 1370


>gi|186687055|ref|YP_001870198.1| SNF2-related protein [Nostoc punctiforme PCC 73102]
 gi|186469358|gb|ACC85157.1| SNF2-related protein [Nostoc punctiforme PCC 73102]
          Length = 1403

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 66/118 (55%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++H+H+I   L   GI +  +      + + K +D F+  +  + L+   + 
Sbjct: 1253 KALVFSQFVDHLHIIRDYLEQQGINYQYLDGSTSVAERKKRVDAFQAGSGDVFLISLKAG 1312

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
              GL+L+    V   +P W+ ++E+Q   RAHR+G  RP+ +  L  + T+EE++++ 
Sbjct: 1313 GTGLNLTAADYVIHTDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEEKIVQL 1370


>gi|114558614|ref|XP_513683.2| PREDICTED: transcription termination factor 2 [Pan troglodytes]
 gi|410268176|gb|JAA22054.1| transcription termination factor, RNA polymerase II [Pan
           troglodytes]
 gi|410293876|gb|JAA25538.1| transcription termination factor, RNA polymerase II [Pan
           troglodytes]
 gi|410293878|gb|JAA25539.1| transcription termination factor, RNA polymerase II [Pan
           troglodytes]
 gi|410338047|gb|JAA37970.1| transcription termination factor, RNA polymerase II [Pan
           troglodytes]
          Length = 1162

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 29/155 (18%)

Query: 611 YLSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNR 670
           + S  TLI+ P+ L+ HWK ++++ V   +L ++++    + S   +   YD+VITT++ 
Sbjct: 639 FTSHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARILSTYDIVITTYSL 698

Query: 671 LSAEWGRRKK---------------SPMMQVHWLRVMLDEGHTLGSSLNLTN-KLQMAIS 714
           ++ E    K+               +P++++ W R++LDE H      N+ N ++Q +I+
Sbjct: 699 VAKEIPTNKQEAEIPGANLNVEGTSTPLLRIAWARIILDEAH------NVKNPRVQTSIA 752

Query: 715 ---LTASNRWLLTGTPTPNTPNSQLSHLQPMLKFL 746
              L A  RW +TGTP  N     L  +  +LKFL
Sbjct: 753 VCKLQACARWAVTGTPIQNN----LLDMYSLLKFL 783



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 15/153 (9%)

Query: 973  TFLKQDLYRPNLESNK--------------ALPDKVIIFSQFLEHIHVIEQQLTVAGIKF 1018
            TF K +L+    ES K              +   K +I SQ+   + V+   L   G+ +
Sbjct: 977  TFFKMELFEGMRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKRGLTY 1036

Query: 1019 AGMYSPMHSSNKIKSLDMFRHDASCLALLMDG-SASLGLDLSFVTRVFLMEPIWDRSMEE 1077
            A +   ++   ++  ++ F H      +L+   +  +GL+L+    +FL++  W+ S+E+
Sbjct: 1037 ATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLED 1096

Query: 1078 QVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            Q   R +R+G  + + +      GTVEE++L+ 
Sbjct: 1097 QACDRIYRVGQQKDVVIHRFVCEGTVEEKILQL 1129


>gi|67538626|ref|XP_663087.1| hypothetical protein AN5483.2 [Aspergillus nidulans FGSC A4]
 gi|40743453|gb|EAA62643.1| hypothetical protein AN5483.2 [Aspergillus nidulans FGSC A4]
 gi|259485068|tpe|CBF81824.1| TPA: ATP-dependent DNA helicase (Eurofung) [Aspergillus nidulans FGSC
            A4]
          Length = 1184

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 2/127 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K+IIFSQF   + ++E  +   G ++      M  +++  ++  F  D SC  +L+   
Sbjct: 1021 EKIIIFSQFTSLLDLLEIPIAREGHRYRRYDGSMKPADRNSAVLDFTDDPSCKVMLVSLK 1080

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + + GL+L     V + +P W+  +EEQ + RAHR+G  R +HV  + +  TVE++++E 
Sbjct: 1081 AGNSGLNLVAANHVIIFDPFWNPYVEEQAVDRAHRIGQLREVHVHRILVPETVEDRIIE- 1139

Query: 1111 LQDTDRC 1117
            LQD  R 
Sbjct: 1140 LQDKKRA 1146



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 44/189 (23%)

Query: 599 LALCEPLDSVRLYLSR--------ATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDH 649
           + L + + ++ L +SR         TLI+ P  L+  WK +I++ + PG +L +++    
Sbjct: 499 MGLGKTIQAIALMVSRPSSDPERKTTLIIAPVALMQQWKREIEKMLSPGHRLQVYILHGD 558

Query: 650 KKPSAHSLAWDYDVVITTFNRLSAEWGRRKKSPMM-----------------------QV 686
           K  ++ S    YDVV+TTF  L++E  R  K   +                         
Sbjct: 559 KGRTSFSDLKKYDVVLTTFGMLASELKRVIKYEQLLKDGAEEPTLTRQYLKTLPCLGPTS 618

Query: 687 HWLRVMLDEGHTLGSSLNLTNKLQMAIS---LTASNRWLLTGTPTPNTPNSQLSHLQPML 743
            W RV++DE   + +        Q AI+   L  + RW ++GTP  N     +  L  +L
Sbjct: 619 KWYRVIIDEAQCIKN-----RATQSAIACCRLNTTYRWCMSGTPMMNN----VEELHSLL 669

Query: 744 KFLHEEAYG 752
           KFL    Y 
Sbjct: 670 KFLRIRPYA 678


>gi|356574101|ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like [Glycine max]
          Length = 1027

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 2/133 (1%)

Query: 985  ESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCL 1044
            ES    P K I+FSQ+   + ++E  L   GI++  +   M    + K++  F  +    
Sbjct: 866  ESTTEGPIKAIVFSQWTSMLDLVETSLKQFGIQYRRLDGRMTLGARDKAVKDFNTEPEIT 925

Query: 1045 ALLMD-GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTV 1103
             +LM   + +LGL++     V L++  W+ + E+Q I RAHR+G TRP+ V  + ++ TV
Sbjct: 926  VMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTV 985

Query: 1104 EEQMLEFLQDTDR 1116
            E+++L  LQD  R
Sbjct: 986  EDRILA-LQDDKR 997



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 65/263 (24%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFN----- 669
            TL+V P+ ++  W  ++ + V   +L + V+    +         +DVV+TT++     
Sbjct: 387 GTLVVCPASVLRQWARELDEKVGDEKLSVLVYHGGSRTKDPVELAKFDVVLTTYSIVTNE 446

Query: 670 --------------------RLSAEWG---RRKK------------------------SP 682
                                LS+E+    +RKK                         P
Sbjct: 447 VPKQPLVEEDDIDEKMGERFGLSSEFSVSKKRKKPFNGNKKSKKGGKGIDSSSIECGSGP 506

Query: 683 MMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNTPNSQLSHLQPM 742
           + +V W RV+LDE  T+ +  + T   +   SL A  RW L+GTP  NT    +  L   
Sbjct: 507 LAKVGWFRVILDEAQTIKN--HRTQVARACCSLRAKRRWCLSGTPIQNT----IDDLYSY 560

Query: 743 LKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQLLHRCMISARKTDLQ------TI 796
            +FL  + Y    K++   I  P      +G  +L  +L   M+   K  L        +
Sbjct: 561 FRFLKYDPYAV-YKSFYNTIKVPISKNTIQGYKKLQAVLRAIMLRRTKGTLLDGKPIINL 619

Query: 797 PLCIKEVTFLNFTEEHAGTYNEL 819
           P    E++ ++F+ E    Y +L
Sbjct: 620 PPKTIELSKVDFSIEERAFYTKL 642


>gi|167837009|ref|ZP_02463892.1| helicase, Snf2 family protein [Burkholderia thailandensis MSMB43]
          Length = 711

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 1/142 (0%)

Query: 971  TNTFLKQDLYRPNLESNKALPD-KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSN 1029
            T+  +K D      ES  A P+ K ++FSQ+     ++ ++L   GI +   +  + S+ 
Sbjct: 402  TDHGVKADELATLFESLFAQPEAKAVVFSQWTRTHEIVIRRLKKLGIGYVSFHGGVPSAR 461

Query: 1030 KIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGAT 1089
            +   L+ FR D  C   L   + S GL+L   + +  M+  W+ ++ EQ I+R HRMG  
Sbjct: 462  RPALLERFRDDPDCRVFLSTDAGSTGLNLQHASTLVNMDLPWNPAVLEQRIARIHRMGQR 521

Query: 1090 RPIHVETLAMRGTVEEQMLEFL 1111
            +P+ +     +GT+EE ML  L
Sbjct: 522  KPVRIINYVAKGTIEEGMLSVL 543


>gi|32470671|ref|NP_863664.1| helicase [Rhodopirellula baltica SH 1]
 gi|32442816|emb|CAD71334.1| helicase [Rhodopirellula baltica SH 1]
          Length = 1176

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 5/153 (3%)

Query: 961  LQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAG 1020
            ++PS   W  T++ L+  L+   +E  +    + ++FSQF++H+ V+   L   GI +  
Sbjct: 997  VEPS---WKGTSSKLQ--LFLSLVEELREGDHRALVFSQFVKHLSVVRAALDERGISYQY 1051

Query: 1021 MYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVI 1080
            +     S  + + +D F++    L L+   +   GL+L+    V  ++P W+ ++E+Q  
Sbjct: 1052 LDGATPSHERQRRVDAFQNGEGDLFLISLKAGGTGLNLTAADYVLHLDPWWNPAVEDQAT 1111

Query: 1081 SRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
             RAHR+G  R + V  L    T+EEQ+L+   D
Sbjct: 1112 DRAHRIGQERAVTVYRLVAERTIEEQILQLHAD 1144


>gi|242772478|ref|XP_002478043.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Talaromyces
            stipitatus ATCC 10500]
 gi|218721662|gb|EED21080.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Talaromyces
            stipitatus ATCC 10500]
          Length = 1146

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 72/126 (57%), Gaps = 2/126 (1%)

Query: 992  DKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-G 1050
            +K IIFSQF   + ++E  +   G K+      M+  ++ +S+  F  +  C  +L+   
Sbjct: 992  EKTIIFSQFTSLLDLLEVPINRRGWKYRRYDGSMNPRDRNESVLEFTDNPECDIMLVSLK 1051

Query: 1051 SASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEF 1110
            + + GL+L   ++V + +P W+  +EEQ I RAHR+G TRP+ V  + +  TVE+++L  
Sbjct: 1052 AGNAGLNLVAASQVIIFDPFWNPYIEEQAIDRAHRLGQTRPVQVHRVLVEKTVEDRILA- 1110

Query: 1111 LQDTDR 1116
            LQ+  R
Sbjct: 1111 LQEEKR 1116



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 45/241 (18%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           + TLI+ P  L+  WK +I + V+P  +L +F+    K+ +       YDVV+TTF  + 
Sbjct: 470 KTTLIIAPVALMQQWKREIDRLVKPEHKLSVFILHGEKRKTTFDKLKKYDVVLTTFGSMG 529

Query: 673 AEWGRRKKS---------------------PMM--QVHWLRVMLDEGHTLGSSLNLTNKL 709
            E  +R++                      P++  Q  W RV++DE   +    N   K 
Sbjct: 530 TELKKREQYDELRRFASQNSANMIAEARALPLLGPQSTWYRVIIDEAQCIK---NRNTKS 586

Query: 710 QMA-ISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEA 768
            +A  +L A+ RW ++GTP  N     +  L  +L+FL    Y   ++ ++    RP + 
Sbjct: 587 AIACCALNATYRWCMSGTPMMNG----VHELHSLLRFLRIGPYNSLER-FNKTFTRPLKT 641

Query: 769 EMEEGRSRLLQ---------LLHRCMISARKTD-LQTIPLCIKEVTFLNFTEEHAGTYNE 818
              EGR++ LQ         LL R   S +    L  +P    E     F+E+    YN 
Sbjct: 642 --REGRNKALQQLRVVLKAILLRRTKFSKQDGKPLIDLPPRTTEKVHAVFSEDEQQLYNS 699

Query: 819 L 819
           L
Sbjct: 700 L 700


>gi|449137271|ref|ZP_21772601.1| SNF2-like protein [Rhodopirellula europaea 6C]
 gi|448884129|gb|EMB14632.1| SNF2-like protein [Rhodopirellula europaea 6C]
          Length = 1176

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 5/153 (3%)

Query: 961  LQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAG 1020
            ++PS   W  T++ L+  L+   +E  +    + ++FSQF++H+ V+   L   GI +  
Sbjct: 997  VEPS---WKGTSSKLQ--LFLSLVEELREGDHRALVFSQFVKHLSVVRAALDERGISYQY 1051

Query: 1021 MYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVI 1080
            +     S  + + +D F++    L L+   +   GL+L+    V  ++P W+ ++E+Q  
Sbjct: 1052 LDGATPSHERQRRVDAFQNGEGDLFLISLKAGGTGLNLTAADYVLHLDPWWNPAVEDQAT 1111

Query: 1081 SRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
             RAHR+G  R + V  L    T+EEQ+L+   D
Sbjct: 1112 DRAHRIGQERAVTVYRLVAERTIEEQILQLHAD 1144


>gi|421613554|ref|ZP_16054629.1| SNF2-related protein [Rhodopirellula baltica SH28]
 gi|408495698|gb|EKK00282.1| SNF2-related protein [Rhodopirellula baltica SH28]
          Length = 1176

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 5/153 (3%)

Query: 961  LQPSYRQWSNTNTFLKQDLYRPNLESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAG 1020
            ++PS   W  T++ L+  L+   +E  +    + ++FSQF++H+ V+   L   GI +  
Sbjct: 997  VEPS---WKGTSSKLQ--LFLSLVEELREGDHRALVFSQFVKHLSVVRAALDERGISYQY 1051

Query: 1021 MYSPMHSSNKIKSLDMFRHDASCLALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVI 1080
            +     S  + + +D F++    L L+   +   GL+L+    V  ++P W+ ++E+Q  
Sbjct: 1052 LDGATPSHERQRRVDAFQNGEGDLFLISLKAGGTGLNLTAADYVLHLDPWWNPAVEDQAT 1111

Query: 1081 SRAHRMGATRPIHVETLAMRGTVEEQMLEFLQD 1113
             RAHR+G  R + V  L    T+EEQ+L+   D
Sbjct: 1112 DRAHRIGQERAVTVYRLVAERTIEEQILQLHAD 1144


>gi|240274021|gb|EER37539.1| DNA repair and recombination protein RAD5B [Ajellomyces capsulatus
            H143]
          Length = 294

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 68/118 (57%), Gaps = 1/118 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FSQ++  + ++E QL   GI FA +   M S+ +  +++   +D++C  LL     
Sbjct: 141  KTVVFSQWVSFLDIVEPQLVRNGITFARIDGKMSSAKRDAAMNALSNDSNCTVLLASLNV 200

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             S+GL+L    +V L +  W  ++E+Q + R +R+G  RP  +  L M  ++E+++L+
Sbjct: 201  CSVGLNLVAANQVILADSWWAPAIEDQAVDRVYRLGQKRPTTIWRLVMENSIEDRVLD 258


>gi|386815665|ref|ZP_10102883.1| SNF2-related protein [Thiothrix nivea DSM 5205]
 gi|386420241|gb|EIJ34076.1| SNF2-related protein [Thiothrix nivea DSM 5205]
          Length = 1390

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 65/120 (54%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K ++FSQF++H+ +I   L   GI +  +        + + +D F+     + L+   + 
Sbjct: 1239 KALVFSQFVKHLELIRAWLDGQGIHYQYLDGSTPMEQRKQRVDAFQRGEGDIFLISLKAG 1298

Query: 1053 SLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFLQ 1112
              GL+L+    V  M+P W+ ++E+Q   RAHR+G  RP+ V  L   GT+EE++++  Q
Sbjct: 1299 GFGLNLTAADYVIHMDPWWNPAVEDQASDRAHRIGQQRPVTVYRLVAEGTIEEKIVKLHQ 1358


>gi|284041008|ref|YP_003390938.1| SNF2-like protein [Spirosoma linguale DSM 74]
 gi|283820301|gb|ADB42139.1| SNF2-related protein [Spirosoma linguale DSM 74]
          Length = 1003

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 7/147 (4%)

Query: 984  LESNKALPDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASC 1043
            LES      KV++FSQF++H+ V+ Q L    IK+A  Y    + ++   +++F+ D S 
Sbjct: 846  LESAMTENHKVLVFSQFIKHLTVVRQYLKEKNIKYA--YLDGSTVDRQSQVELFQTDDSV 903

Query: 1044 -LALLMDGSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGT 1102
             L L+   +  LG +L+    VF+++P W+ ++E Q + RAHR+G  + +       + T
Sbjct: 904  KLFLISLKAGGLGHNLTAADYVFILDPWWNPAIEAQAVDRAHRIGQQKTVFTYKFIAKNT 963

Query: 1103 VEEQMLEFLQDTDRCRRLLKEELVKPE 1129
            VEE++L       R ++ L   L+  E
Sbjct: 964  VEEKILSL----QRAKQQLAGSLITTE 986



 Score = 47.8 bits (112), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 22/222 (9%)

Query: 612 LSRATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKPSAHSLAWDYDVVITTFNRL 671
           ++  +L+V+P+ L+ +W+ + ++     ++ ++  T  +K +A     DYD+++T++  +
Sbjct: 592 VTEPSLLVMPTSLLYNWELEARKFTPDLRVMVYTGTYREKNTAQ--FDDYDLILTSYGIV 649

Query: 672 SAEWGRRKKSPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPNT 731
                R     +    +  V+LDE   + +  +   K  M   L  + R +LTGTP  N+
Sbjct: 650 -----RIDIDLLSDYRFNYVILDESQAIKNPSSHITKAVM--QLNTAFRLILTGTPIENS 702

Query: 732 PN---SQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGR-SRLLQLLHRCMIS 787
                SQ+S + P L  L  +++ +N+         P E   +E + S+L  L+   M+ 
Sbjct: 703 TMDLWSQMSFINPGL--LGSQSFFRNE------FQIPIEKRHDEAKTSKLYGLIKPFMLR 754

Query: 788 ARKTDLQT-IPLCIKEVTFLNFTEEHAGTYNELVVTVRRNIL 828
             K  + T +P  ++ V + + T + A  Y E     R  IL
Sbjct: 755 RNKAQVATDLPPKVESVLYCDMTPDQATQYEEAKSYYRNLIL 796


>gi|295666383|ref|XP_002793742.1| DNA repair protein RAD16 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226278036|gb|EEH33602.1| DNA repair protein RAD16 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1240

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 2/128 (1%)

Query: 991  PDKVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD- 1049
            P+K IIFSQF   + ++E  +   G  +      M+ + + +++  F     C  +L+  
Sbjct: 1083 PEKTIIFSQFTSLLDLLEVPILRKGWGYRRYDGSMNPNQRNEAVMKFTDSKDCTIMLVSL 1142

Query: 1050 GSASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLE 1109
             + + GL+L   ++V + +P W+  +EEQ I RAHR+G  RP+ V  + ++ TVE+++L+
Sbjct: 1143 KAGNAGLNLVAASQVIIFDPFWNPYIEEQAIDRAHRIGQVRPVVVHRILVKNTVEDRILD 1202

Query: 1110 FLQDTDRC 1117
             LQ+  R 
Sbjct: 1203 -LQEKKRT 1209



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 41/240 (17%)

Query: 614 RATLIVVPSYLVDHWKTQIQQHVRPG-QLHLFVWTDHKKPSAHSLAWDYDVVITTFNRLS 672
           +  LI+ P  LV  WK +I++ ++P  QL +FV  + K+   +S    YDVV+TT+  L+
Sbjct: 584 KTNLIIAPVALVQQWKREIERMIKPRHQLKVFVLHNGKRNVPYSTLKTYDVVLTTYGTLA 643

Query: 673 AEWGRRKKSPMMQV-----------------------HWLRVMLDEGHTLGSSLNLTNKL 709
           AE+ R++ +  +++                        W RV+LDE   + +    T   
Sbjct: 644 AEFKRKEFADRIKIDNPHTYQNLPDDAINLPLLGEESKWYRVILDEAQCIKNK--DTKSA 701

Query: 710 QMAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAE 769
           +    L +  RW ++GTP  N     +  L  ++KFL  + Y  N + ++    RP ++ 
Sbjct: 702 RACSQLHSIYRWCMSGTPMMNN----VLELFSLIKFLRIKPY-HNIETFNTIFARPLKSG 756

Query: 770 MEEGRSRLLQLLHRCM--ISARKTDLQTI--------PLCIKEVTFLNFTEEHAGTYNEL 819
           +E  ++R ++ L   +  I  R+T    I        P    E T+  F+E+    Y  L
Sbjct: 757 VEHLQNRAMEKLQALLKAILLRRTKRSKIDGKQILQLPPRTTEKTYAVFSEDEQALYRAL 816


>gi|346320191|gb|EGX89792.1| DNA repair protein RAD5 [Cordyceps militaris CM01]
          Length = 1114

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 1/117 (0%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMDGSA 1052
            K +IFSQF   + +IE  L  A + F  +   M    +   LD F      + LL+   A
Sbjct: 964  KSVIFSQFTSFLSLIEPALARAHVTFLRLDGSMAQKARAAVLDQFTEKQGFMVLLISLRA 1023

Query: 1053 S-LGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQML 1108
              +GL+L+   RVF+M+P W  ++E Q I R HR+G    + V+   ++ +VEE+ML
Sbjct: 1024 GGVGLNLTSAGRVFMMDPWWSFAVEAQAIDRVHRLGQEDAVQVKRFIVKESVEERML 1080



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 37/270 (13%)

Query: 616 TLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKK---------PSAHSLAWD-----Y 661
           TL+V P  L+  W+++ ++  + G + + ++  ++K         PS  SLA D     Y
Sbjct: 535 TLVVAPMSLLSQWQSEAEKASKEGTVKIELYYGNEKANNLQALCSPSNASLAPDLVITSY 594

Query: 662 DVVITTFNRLSAEWGRRKK-SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQMAISLTASNR 720
            VV++ F+ ++A+ G +   + +  +++ R++LDE H + +  + T K      +++ +R
Sbjct: 595 GVVLSEFSAIAAKNGDKSSHTGIFSLNFFRIILDEAHYIKNRSSKTAK--ACYEMSSKHR 652

Query: 721 WLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPFEAEMEEGRSRLLQL 780
           W+LTGTP  N    +L  L  +++FL  E +  N   W   I  PFE+        ++Q 
Sbjct: 653 WVLTGTPIVN----KLEDLFSLVRFLGVEPWN-NFSFWKTFITVPFESGDFVRALNVVQT 707

Query: 781 LHRCMISARKTDLQT------IPLCIKEVTF--LNFTEEHAGTYNELVVTVRRNILMADW 832
           +   ++  R  D++T      +PL  K+V    +  ++     Y+ +    +R       
Sbjct: 708 VLEPLVMRRTKDMKTPDGQPLVPLPPKQVDVVEVELSKTERDVYDYIFNRAKRTF----- 762

Query: 833 NDPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
               +VE+    K +      I  LR SCC
Sbjct: 763 --NQNVEAGTVMKAFTTIFAQILRLRQSCC 790



 Score = 47.4 bits (111), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 17/98 (17%)

Query: 165 LKLFPHQQAAVEWMLHREWNAEVLR----HPL---YI---------DL-ATEDGFYFYVN 207
           + L P+Q+ ++ WM+ +E +A   R    HPL   Y+         DL    D   FYVN
Sbjct: 398 MTLRPYQKQSLHWMIAKEKDARSNREPSMHPLWEEYVWPVKDHDDKDLPVINDVTKFYVN 457

Query: 208 TVSGDIATGTAPTMRDFHGGMFCDEPGLGKTITALSLI 245
             SGD++       +   GG+  DE GLGKTI  L+L+
Sbjct: 458 PYSGDLSLEFPVQEQHCLGGVLADEMGLGKTIQMLALM 495


>gi|410930398|ref|XP_003978585.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Takifugu
           rubripes]
          Length = 1649

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 126/289 (43%), Gaps = 64/289 (22%)

Query: 615 ATLIVVPSYLVDHWKTQIQQHVRPGQLHLFVWTDHKKP---SAHSLAWDYDVVITTFNRL 671
           ATLI+ PS +   W  +I +H+R   L + V+   KK      H LA + DVVITT++ L
Sbjct: 683 ATLIISPSSICHQWVEEINRHIRSSSLRVLVYQGVKKHGFIQPHMLA-EQDVVITTYDVL 741

Query: 672 SAEW------------GRRKK---------SPMMQVHWLRVMLDEGHTLGSSLNLTNKLQ 710
            +E             GRR +         SP++ V W R+ LDE   +          +
Sbjct: 742 RSELNYVDIPHSNSKDGRRFRNQKRYMAVPSPLVAVEWWRICLDEAQMVECP--TAKAAE 799

Query: 711 MAISLTASNRWLLTGTPTPNTPNSQLSHLQPMLKFLHEEAYGQNQKAWDGGILRPF-EAE 769
           MA+ L + NRW ++GTP        L  +  ++ FL  + Y      WD  + RP+    
Sbjct: 800 MALRLASVNRWCVSGTPV----QRGLEDVYGLVLFLGVDPYWVKH-WWDQLLYRPYRRGN 854

Query: 770 MEEGRSRLLQLLHRCMISARK--TDLQTIPLCIKEVTFLNFT--------EEHAGTYNEL 819
            E   + + QLL R   SA+K   D   IP   +EV +L F+         +H     + 
Sbjct: 855 TEPLYNVIAQLLWR---SAKKDVIDQIQIPPQTEEVHWLTFSPVEGHFYHRQHEVCSQDA 911

Query: 820 VVTVRRNILMADWN------DPSHVESLLNPKQWKFRSTTIRNLRLSCC 862
           +V +R+   ++DW+      D   V ++L P         +  LR +CC
Sbjct: 912 LVKLRK---ISDWSLKLGSLDRRTVNTILCP---------LLRLRQACC 948



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 4/125 (3%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K ++FS +L  + +I + L    ++F+ + + +H   +  +L  F++D     LL+   +
Sbjct: 1494 KCLVFSTWLSVLDIIAKALFDNNMEFSQI-NGIHKFQE--NLSSFKYDEKINILLLPLHT 1550

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
             S GL++   T V L+EPI + + E Q I R HR+G T+P  V    +R T+EE+M   L
Sbjct: 1551 GSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTFVHRFLIRSTIEERMQAML 1610

Query: 1112 QDTDR 1116
            +  ++
Sbjct: 1611 KTAEK 1615



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 167 LFPHQQAAVEWMLHREWN-----AEVLRHPLYIDLATEDGFYFYVNTVSGDIATGTAPTM 221
           L P+Q  AV WML RE +      E   H L+ +L T  G   + N  +G +        
Sbjct: 282 LRPYQSQAVNWMLRREKSRNISPKEQTLHFLWRELITLCGKKLFYNPFTGCLIREFPLVG 341

Query: 222 RDFHGGMFCDEPGLGKTITALSLIL 246
            ++ GG+  DE GLGKT+  LSLIL
Sbjct: 342 AEWPGGILADEMGLGKTVEVLSLIL 366


>gi|320103193|ref|YP_004178784.1| SNF2-like protein [Isosphaera pallida ATCC 43644]
 gi|319750475|gb|ADV62235.1| SNF2-related protein [Isosphaera pallida ATCC 43644]
          Length = 1912

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 79/141 (56%), Gaps = 7/141 (4%)

Query: 993  KVIIFSQFLEHIHVIEQQLTVAGIKFAGMYSPMHSSNKIKSLDMFRHDASCLALLMD-GS 1051
            K +IFSQF   +++++ +L   GI +  +    H  N+ + ++ F++D +    L+   +
Sbjct: 1764 KALIFSQFTRFLNIVKDRLDKEGIVYEYLDGKTH--NRAERVERFQNDPNVPVFLISLKA 1821

Query: 1052 ASLGLDLSFVTRVFLMEPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTVEEQMLEFL 1111
              LGL+L+    V+L++P W+ ++E Q I R+HR+G T  +    L  R TVE++++E  
Sbjct: 1822 GGLGLNLTAAEYVYLLDPWWNPAVEAQAIDRSHRIGQTSHVFAYRLICRDTVEQKIIEL- 1880

Query: 1112 QDTDRCRRLLKEELVKPEREG 1132
                + +R L + ++  E EG
Sbjct: 1881 ---QKTKRALADAILGGEGEG 1898


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.134    0.420 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,796,910,838
Number of Sequences: 23463169
Number of extensions: 807160153
Number of successful extensions: 1733609
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8188
Number of HSP's successfully gapped in prelim test: 4747
Number of HSP's that attempted gapping in prelim test: 1688444
Number of HSP's gapped (non-prelim): 38883
length of query: 1158
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 1004
effective length of database: 8,745,867,341
effective search space: 8780850810364
effective search space used: 8780850810364
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 83 (36.6 bits)