Your job contains 1 sequence.
>001099
MAPTRRSKSVNKRVAYTSEVASKKKAENADRSGKRKRKLSDMLGPQWSKEELERFYEAYR
KYGKDWKKIAAAVRNRTAEMVEALFTMNRAYLSLPEGTASVVGLIAMMTDHYGILAGSDG
EQESDEATGSSQKSQKCAGGKFQNPPPKGSDGPSPDLLNFQSAAPNYGCLSLLKKRRSGS
RPRAVAKRTPRVPVSYSYDKDNTEKYISPIKQGLKPRLGSIDDDVAHEIALALTEASQRG
GSLLVSQTPKRKRGKPSPVQKGSRTCDVSEMNSSKPHGSEMDEDGRELSLGSTDADNGYY
SRDKIYLMDAETADTVEIQQKGKRYHSKKLKQEESVSNHLDDIKEACSGTEEGQDMVVMK
GKFAMEIADEKNSRSYSKGSKKRSKKVLFKRDESSEFDALQTLADLSLMMPETTADTELS
LQLKEEKPEAVNESKLKGNRSSTGVKDTAIKTSKLGKDCTDDVSVIPESEEGNHLTNSGN
RTKRQKFLPIKLRMDATEELKKFISKGKRSLSASQSKHGKLVKPPEHTSSTDHEKEGNNS
ASSTAHVRTANQVNLPTKVRSRRKMNMQKLLIERDKMSSEDILKSSEDIFNDQNRTNSSF
FDRAIKQKEQLSNCLSWYQVRVWCVSEWFYSTIDYPWFAKREFVEYLDHVGLSHVPRLTR
VEWGVIRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHYSELRSGTKEGLPTDLARPLYV
GQRIIAVHPRTREICDGSVLTVEHSRYRVQFDKRELGIEFVQDIDCMPLNPLENMPASLT
RPNVAFGKFMDNFTELQMNGQPRERDIEGYMKFTPCENLETAYAPSHISPSTNYPINNLL
QQHKGVSYTDSEVHVGSTGQAKEEDVLALSHLRHALDKKEAIVSELRCMNDEILENQKDG
DNSFKDSELFKKHYAAILLQLNDINEQVASALFCLRQRNTYQGNTCLTGLKPMSGLGNLG
GGLPNSFDHSAYQTPESGPHVVEVVESSRSKAQKMVDVAVQALSSLEKEGNGIERIEEAM
DYVNNKLAGNDSGMPSIRSSTSADLVHSSRNSQDQQLETHTTNLLANSRAPDSTLNNSSD
ENSAHIPLELIAHCVAALFMIQRCTERDFPPADVALVLDSAVTSLQPCCSQNLPVYAEIQ
KCMGIIRNQILALIPTST
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001099
(1158 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2089438 - symbol:ALY3 "ALWAYS EARLY 3" species... 1660 9.1e-171 1
TAIR|locus:2143666 - symbol:ALY1 "ALWAYS EARLY 1" species... 714 3.3e-145 3
UNIPROTKB|Q5ZMF8 - symbol:LIN9 "Uncharacterized protein" ... 237 2.1e-20 2
UNIPROTKB|Q5TKA1 - symbol:LIN9 "Protein lin-9 homolog" sp... 235 4.4e-20 3
UNIPROTKB|C9J5J4 - symbol:LIN9 "Protein lin-9 homolog" sp... 235 1.0e-19 3
MGI|MGI:1919818 - symbol:Lin9 "lin-9 homolog (C. elegans)... 239 1.2e-19 4
UNIPROTKB|H0Y322 - symbol:LIN9 "Protein lin-9 homolog" sp... 235 4.0e-19 3
UNIPROTKB|F1MIQ3 - symbol:LOC534587 "Uncharacterized prot... 235 5.8e-19 3
UNIPROTKB|F1PWI7 - symbol:LIN9 "Uncharacterized protein" ... 235 1.1e-18 2
ZFIN|ZDB-GENE-030131-1747 - symbol:lin9 "lin-9 homolog (C... 264 1.4e-18 2
RGD|1591104 - symbol:Lin9 "lin-9 homolog (C. elegans)" sp... 236 7.0e-18 3
DICTYBASE|DDB_G0286665 - symbol:lin9 "RmlC-like cupin fam... 174 2.1e-16 4
WB|WBGene00002998 - symbol:lin-9 species:6239 "Caenorhabd... 197 1.5e-14 2
UNIPROTKB|P30630 - symbol:lin-9 "Protein lin-9" species:6... 197 1.5e-14 2
FB|FBgn0023509 - symbol:mip130 "Myb-interacting protein 1... 194 5.6e-11 3
DICTYBASE|DDB_G0293562 - symbol:DDB_G0293562 species:4468... 131 9.5e-05 1
>TAIR|locus:2089438 [details] [associations]
symbol:ALY3 "ALWAYS EARLY 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293 eggNOG:NOG148048
HOGENOM:HOG000029798 InterPro:IPR010561 Pfam:PF06584 EMBL:AJ583497
EMBL:AP001305 EMBL:BT011578 EMBL:BT012245 EMBL:AK230069
IPI:IPI00846542 RefSeq:NP_001078197.2 UniGene:At.8305
ProteinModelPortal:Q6A332 SMR:Q6A332 IntAct:Q6A332 STRING:Q6A332
PaxDb:Q6A332 PRIDE:Q6A332 EnsemblPlants:AT3G21430.2 GeneID:821697
KEGG:ath:AT3G21430 TAIR:At3g21430 OMA:IQKCTER PhylomeDB:Q6A332
ProtClustDB:CLSN2925526 Genevestigator:Q6A332 Uniprot:Q6A332
Length = 1132
Score = 1660 (589.4 bits), Expect = 9.1e-171, P = 9.1e-171
Identities = 391/847 (46%), Positives = 524/847 (61%)
Query: 341 DDIKEACSGTEEGQDMVVMKGKFAMEIADEXXXXXXXXXXXXXXXXXXXXXDESSEFDAL 400
+D KEACSGT+E + KF E + DE + DAL
Sbjct: 332 EDAKEACSGTDEAPSLGAPDEKFEQE-REGKALKFTYKVSRRKSKKSLFTADEDTACDAL 390
Query: 401 QTLADLSLMMPETTADTELSLQLKEEKPEAVNESKLKGNRSSTGVKDTAIKTSKLGKDCT 460
TLADLSLMMPET DTE S+Q +E+K S KG ++ K ++++ SK + +
Sbjct: 391 HTLADLSLMMPETATDTESSVQAEEKKAGEAYVSDFKGTDPASMSKSSSLRNSKQRRYGS 450
Query: 461 DDVSVIPESEEGNHLTNSGNRTKRQKFLPIKLRMDATEELKKFISKGKRSLSASQSKH-G 519
+D+ PE E + ++S + +RQK LP K+R + LK ++ + + SK G
Sbjct: 451 NDLCN-PELERKSP-SSSLIQKRRQKALPAKVRENV---LKDELAASSQVIEPCNSKGIG 505
Query: 520 KLVKPP---EHTSS--TDHEKEGNNSASSTAHVRTANQV-----NLPTKVRSRRKMNMQK 569
+ KP + ++S HEK+ SA S H ++N + + P+ ++++N+
Sbjct: 506 EEYKPVGRGKRSASIRNSHEKK---SAKSHDHTSSSNNIVEEDESAPSNAVIKKQVNLPT 562
Query: 570 LLIERDKMSSEDILKSSEDIFNDQNRTNSSFFDRAIKQKEQLSNCLSWYQVRVWCVSEWF 629
+ R K+ +E L D + + + E+ S+C+S ++ R WC+ EWF
Sbjct: 563 KVRSRRKIVTEKPLTI------DDGKISETI--------EKFSHCISSFRARRWCIFEWF 608
Query: 630 YSTIDYPWFAKREFVEYLDHVGLSHVPRLTRVEWGVIRSSLGRPRRFSEQFLKEEKEKLN 689
YS IDYPWFA++EFVEYLDHVGL HVPRLTRVEWGVIRSSLG+PRRFSEQFLKEEKEKL
Sbjct: 609 YSAIDYPWFARQEFVEYLDHVGLGHVPRLTRVEWGVIRSSLGKPRRFSEQFLKEEKEKLY 668
Query: 690 QYRESVRNHYSELRSGTKEGLPTDLARPLYVGQRIIAVHPRTREICDGSVLTVEHSRYRV 749
YR+SVR HY EL +G +EGLP DLARPL V QR+I +HP++REI DG+VLTV+H RYR+
Sbjct: 669 LYRDSVRKHYDELNTGMREGLPMDLARPLNVSQRVICLHPKSREIHDGNVLTVDHCRYRI 728
Query: 750 QFDKRELGIEFVQDIDCMPLNPLENMPASLTRPNVAFGKF-MDNFTELQMNGQPRERDIE 808
QFD ELG+EFV+D +CMPLNPLENMPASL R + AF + + N E +M+ + +E +E
Sbjct: 729 QFDNPELGVEFVKDTECMPLNPLENMPASLAR-HYAFSNYHIQNPIEEKMHERAKESMLE 787
Query: 809 GYMKFTPCENLETAYAPSHISPSTNYPINNLLQQHK-GVSYTDSEVHVG----------- 856
GY K + CE H+ S NY I+N L+Q K +S ++ + G
Sbjct: 788 GYPKLS-CET-------GHLLSSPNYNISNSLKQEKVDISSSNPQAQDGVDEALALQLFN 839
Query: 857 ----STGQ--AKEEDVLALSHLRHALDKKEAIVSELRCMNDEILENQKDG-DNSFKDSEL 909
S GQ A+E DV ALS L ALDKKE ++ EL+CMNDE++E+QKDG +N+ KDSE
Sbjct: 840 SQPSSIGQIQAREADVQALSELTRALDKKELVLRELKCMNDEVVESQKDGHNNALKDSES 899
Query: 910 FKKHYAAILLQLNDINEQVASALFCLRQRNTYQGNTCLTGLKPMSXXXXXXXXXPNSFDH 969
FKK YAA+L QL++INEQV+ AL LRQRNTYQ N + ++ MS D+
Sbjct: 900 FKKQYAAVLFQLSEINEQVSLALLGLRQRNTYQENVPYSSIRRMSKSGEPDGQLTYE-DN 958
Query: 970 SAYQTPESGPHVVEVVESSRSKAQKMVDVAVQALSSLEKEGNGIERIEEAMDYVNNKLAG 1029
+A T +G HV E+VESSR KA+KMV AVQAL L K+ N +EEA+D+VNN+L
Sbjct: 959 NASDT--NGFHVSEIVESSRIKARKMVYRAVQALELLRKDENNNVNMEEAIDFVNNQL-- 1014
Query: 1030 NDSGMPSIRSSTSADLVHSSRNSQDQQLETHTTNLLANSRAPDSTLNNSSDENSAHIPLE 1089
SI T V ++ QDQ+L + T N +++ A DS LN D+N +P +
Sbjct: 1015 ------SI-DQTEGSSVQQTQGGQDQRLPS-TPNPPSSTPANDSHLNQP-DQNDLQVPSD 1065
Query: 1090 LIAHCVAALFMIQRCTERDFPPADVALVLDSAVTSLQPCCSQNLPVYAEIQKCMGIIRNQ 1149
L++ C+A L MIQ+CTER FPP++VA VLDSAV SLQPCCSQNLP+Y EIQKCMGIIRNQ
Sbjct: 1066 LVSRCIATLLMIQKCTERQFPPSEVAQVLDSAVASLQPCCSQNLPIYTEIQKCMGIIRNQ 1125
Query: 1150 ILALIPT 1156
ILAL+P+
Sbjct: 1126 ILALVPS 1132
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 264/610 (43%), Positives = 357/610 (58%)
Query: 1 MAPTRRSKSVNKRVAYTSEVASKKKAENADRSGKRKRKLSDMLGPQWSKEELERFYEAYR 60
MAP+R KS K+ V+ K E+ ++ +RKRKLSDMLGPQWSKEELERFYE YR
Sbjct: 1 MAPSRSKKSKYKKKPRAKAVSPHKDEESMSKTKQRKRKLSDMLGPQWSKEELERFYEGYR 60
Query: 61 KYGKDWKKIAAAVRNRTAEMVEALFTMNRAYLSLPEGTASVVGLIAMMTDHYGIL-AGSD 119
K+GK+WKK+A V +R+AEMVEAL+TMN+AYLSLPEGTASVVGL AMMTDHY +L GSD
Sbjct: 61 KFGKEWKKVAGFVHSRSAEMVEALYTMNKAYLSLPEGTASVVGLTAMMTDHYSVLHGGSD 120
Query: 120 GEQESDEATGSSQKSQKCAGGKFQNXXXXXXXXXXXXLLNFQSAAPNYGCLSLLKKRRSG 179
EQE++E + + + K + K + L F+S++ G + LKKRR+
Sbjct: 121 SEQENNEGIETPRSAPKRSRVKSSDHPSIGLEGLSDRL-QFRSSS---GFMPSLKKRRTE 176
Query: 180 SRPRAVAKRTPRVPVSYSYDKDNTEKYISPIKQGLKPRLGSIDDDVAHEIALALTEASQR 239
+ PRAV KRTPR+P+SY+ +KD E+Y+SP+K+GL + DDD+ HEIALAL EASQR
Sbjct: 177 TMPRAVGKRTPRIPISYTLEKDTRERYLSPVKRGLNQKGDDTDDDMEHEIALALAEASQR 236
Query: 240 GGSLLVSQTPKRKRGKPSPVQKGSRT-CDVSEMNSSKPHGSEMDEDGRELSLGSTDADNG 298
GGS S TP RK P +KG R D+ ++ +K H ++M++ E SLGST+ADN
Sbjct: 237 GGSTKNSHTPNRKAKMYPPDKKGERMRADI-DLAIAKLHATDMEDVRCEPSLGSTEADNA 295
Query: 299 YYSRDKIYLMDAETADTVEIQQKGKRYHSKKLKQEESVSNHLDDIKEACSGTEEGQDMVV 358
YS + L E + VE QQKG+ Y+ +++ +E +D KEACSGT+E +
Sbjct: 296 DYSGGRNDLTHGEGSSAVEKQQKGRTYYRRRVGIKE------EDAKEACSGTDEAPSLGA 349
Query: 359 MKGKFAMEIADEXXXXXXXXXXXXXXXXXXXXXDESSEFDALQTLADLSLMMPETTADTE 418
KF E + DE + DAL TLADLSLMMPET DTE
Sbjct: 350 PDEKFEQE-REGKALKFTYKVSRRKSKKSLFTADEDTACDALHTLADLSLMMPETATDTE 408
Query: 419 LSLQLKEEKPEAVNESKLKGNRSSTGVKDTAIKTSKLGKDCTDDVSVIPESEEGNHLTNS 478
S+Q +E+K S KG ++ K ++++ SK + ++D+ PE E + ++S
Sbjct: 409 SSVQAEEKKAGEAYVSDFKGTDPASMSKSSSLRNSKQRRYGSNDLCN-PELERKSP-SSS 466
Query: 479 GNRTKRQKFLPIKLRMDAT-EELK------------------KFISKGKRSLSASQSKHG 519
+ +RQK LP K+R + +EL K + +GKRS S S
Sbjct: 467 LIQKRRQKALPAKVRENVLKDELAASSQVIEPCNSKGIGEEYKPVGRGKRSASIRNSHEK 526
Query: 520 KLVKPPEHTSSTDHEKEGNNSASSTAHVRTANQVNLPTKVRSRRKMNMQKLLIERDKMSS 579
K K +HTSS+++ E + SA S A ++ QVNLPTKVRSRRK+ +K L D S
Sbjct: 527 KSAKSHDHTSSSNNIVEEDESAPSNAVIK--KQVNLPTKVRSRRKIVTEKPLTIDDGKIS 584
Query: 580 EDILKSSEDI 589
E I K S I
Sbjct: 585 ETIEKFSHCI 594
>TAIR|locus:2143666 [details] [associations]
symbol:ALY1 "ALWAYS EARLY 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF46689 EMBL:AC007478 PROSITE:PS51293 EMBL:AJ583498
EMBL:AB493764 IPI:IPI00524271 RefSeq:NP_198113.2 UniGene:At.30796
ProteinModelPortal:Q6A331 SMR:Q6A331 PRIDE:Q6A331
EnsemblPlants:AT5G27610.1 GeneID:832823 KEGG:ath:AT5G27610
TAIR:At5g27610 eggNOG:NOG148048 HOGENOM:HOG000029798
InParanoid:Q6A331 OMA:ITHERDD PhylomeDB:Q6A331
ProtClustDB:CLSN2681354 Genevestigator:Q6A331 InterPro:IPR010561
Pfam:PF06584 Uniprot:Q6A331
Length = 971
Score = 714 (256.4 bits), Expect = 3.3e-145, Sum P(3) = 3.3e-145
Identities = 191/515 (37%), Positives = 277/515 (53%)
Query: 424 KEEKPEAVNESKLKGNRSSTGVKDTAIKTSKLGKDCTDDVSVIPESEEGNHLT----NSG 479
K E V+ S + G++D + D SV PES +GN ++ +
Sbjct: 348 KSNTLETVSTSHHREKAKQAGLEDNLLHAIS-APDKRKPKSV-PESVDGNVVSIEELRTS 405
Query: 480 NRTKRQKF--LPIKLRMDATEELKKFISKG------KRSLSASQSKHG--KLVKPP---- 525
+R ++ KF L + ++T++ + + K + A +S G K +K
Sbjct: 406 SRKRKPKFQVLDVVAPKESTQDKSLYTKESAEVDSLKTPVKARRSSQGPAKQLKTAKTTV 465
Query: 526 EHTSSTDHEKEGNNSASSTAHVRTANQVNLPTKVRSRRKMNMQKLLIERDKMSSEDILKS 585
E +S++D + G ++ V + LP K +RRK++++K L ER K
Sbjct: 466 ESSSASDKKITGPDAVVPATQVSASGPETLPQKPPNRRKISLKKSLQERAK--------- 516
Query: 586 SEDIFNDQNRTNSSFFDRAIKQKEQLSNCLSWYQVRVWCVSEWFYSTIDYPWFAKREFVE 645
S + +D+ R+ + + Q E+LSNCLS+ VR WC+ EWFYS IDYPWFAK EF +
Sbjct: 517 SLETTHDKPRSFKKLSEHELLQ-EKLSNCLSYPLVRRWCIYEWFYSAIDYPWFAKMEFTD 575
Query: 646 YLDHVGLSHVPRLTRVEWGVIRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHYSELRSG 705
YL+HVGL H PRLTRVEW VI+SSLGRPRR S++FL++E++KL +YRESVR HY+ELR
Sbjct: 576 YLNHVGLGHAPRLTRVEWSVIKSSLGRPRRLSQRFLQDERDKLQEYRESVRKHYTELRGC 635
Query: 706 TKEGLPTDLARPLYVGQRIIAVHPRTREICDGSVLTVEHSRYRVQFDKRELGIEFVQDID 765
L TDLARPL VG R+IA+HP+TREI DG +LTV+H++ V FD ELG+E V DID
Sbjct: 636 ATGVLHTDLARPLSVGNRVIAIHPKTREIRDGKILTVDHNKCNVLFD--ELGVELVMDID 693
Query: 766 CMPLNPLENMPASLTRPNVAFGKFMDNFTELQMNGQPRERDIEGYMKFTPC--ENLETAY 823
CMPLNPLE MP L R K + E ++N P + + F+P EN+ +
Sbjct: 694 CMPLNPLEYMPEGLRRQ---IDKCLAICKEARLNRHPSS---DASVLFSPSVLENVNFSM 747
Query: 824 APSHISPSTNYPINNLLQQHKGVSY--TDSEVHVGSTGQAKE-EDVLALSHLRHALDKK- 879
P P+ I + K ++ TD + + S E + LAL H A + +
Sbjct: 748 NPP---PAKQDDIREPVLYGKVIATNTTDQSIVINSKVTGTEIQRTLALQHTSDAQEMEP 804
Query: 880 ---EAIV---SELRCMNDEILENQKDGDNSFKDSE 908
E ++ S + M D ++ G N+ +DSE
Sbjct: 805 EMIEIVIESKSIAQAMVDAAIKAASSGKNN-EDSE 838
Score = 491 (177.9 bits), Expect = 3.3e-145, Sum P(3) = 3.3e-145
Identities = 111/228 (48%), Positives = 149/228 (65%)
Query: 1 MAPTRRSKSVNKRVAYTSEVASKKKAENADRSGKRKRKLSDMLGPQWSKEELERFYEAYR 60
MAPTR+SKSVNKR +T+E + +A ++ +RK+KL+D LGPQW+K EL RFY+AYR
Sbjct: 1 MAPTRKSKSVNKR--FTNEASPDINFGSASKTKQRKKKLADKLGPQWTKRELVRFYDAYR 58
Query: 61 KYGKDWKKIAAAVRN-RTAEMVEALFTMNRAYLSLPEGTASVVGLIAMMTDHYGILAGSD 119
KY DWKK+AAAVRN R+ EMVE LF MNRAYLSLPEGTASV GLIAMMTDHY ++ GS+
Sbjct: 59 KYVGDWKKVAAAVRNNRSVEMVETLFCMNRAYLSLPEGTASVAGLIAMMTDHYSVMEGSE 118
Query: 120 GEQESDEATGSSQKSQKCAGGKFQNXXXXXXXXXXXXLLNFQSAAPNYGCLSLLKKRRS- 178
E E +A+ ++K K + ++ S A GCLS LK+ ++
Sbjct: 119 SEGEDHDASEVTRKHLK------RKRPQVLPSDFREEVVPPHSVASVEGCLSFLKQTQAY 172
Query: 179 GSRPRAVAKRTPRVPVSYSYDKDNTEKYISPIKQGLKPRLGSIDDDVA 226
R RA KRTPR V+ ++++D+ E + P K+ K +L + DDD +
Sbjct: 173 EKRQRATGKRTPRFLVAITHERDDIEDFSPPNKRA-KKQLDA-DDDAS 218
Score = 282 (104.3 bits), Expect = 3.3e-145, Sum P(3) = 3.3e-145
Identities = 66/194 (34%), Positives = 107/194 (55%)
Query: 966 SFDHSAYQTPESGPHVVEVVESSRSKAQKMVDVAVQALSSLEKEGNGIERIEEAMDYVNN 1025
+ H++ E P ++E+V S+S AQ MVD A++A SS + + + +A+ +
Sbjct: 792 ALQHTS-DAQEMEPEMIEIVIESKSIAQAMVDAAIKAASSGKNNEDSENMVHQALSSIGE 850
Query: 1026 KLAGNDSGMPSIRSS--TSADLVHSSRNSQDQQLETHTTNLLANSRAPDSTLNNSSDENS 1083
++S +P I+ T+ L H S N+ E + ++ S +N
Sbjct: 851 HQPLDNSIVPGIKHQEYTNGSLDHHSLNTA----EPMSNGFISQE---------GSGKNK 897
Query: 1084 AHIPLELIAHCVAALFMIQRCTERDFPPADVALVLDSAVTSLQPCCSQNLPVYAEIQKCM 1143
+P ELI CVA+ M+Q +++ +PPADVA ++D+ V LQP C QN+P+Y EIQ CM
Sbjct: 898 TPMPSELITSCVASWLMMQMISKKQYPPADVAQLMDTVVNDLQPRCPQNMPIYREIQTCM 957
Query: 1144 GIIRNQILALIPTS 1157
G+I+ QI+AL+ TS
Sbjct: 958 GLIKTQIMALVRTS 971
Score = 52 (23.4 bits), Expect = 2.1e-43, Sum P(2) = 2.1e-43
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 405 DLSLMMPETTADTE----LSLQ----LKEEKPEAVNESKLKGNRSSTGVKDTAIKTSKLG 456
D S+++ TE L+LQ +E +PE + E ++ + + D AIK + G
Sbjct: 773 DQSIVINSKVTGTEIQRTLALQHTSDAQEMEPEMI-EIVIESKSIAQAMVDAAIKAASSG 831
Query: 457 KDCTDDVSVIPE--SEEGNH--LTNS 478
K+ D +++ + S G H L NS
Sbjct: 832 KNNEDSENMVHQALSSIGEHQPLDNS 857
Score = 47 (21.6 bits), Expect = 3.2e-100, Sum P(4) = 3.2e-100
Identities = 23/62 (37%), Positives = 27/62 (43%)
Query: 23 KKKAENADRSGKRKRKLSDMLGPQWSKEELERFYEAYRKYGKDWKKIAAAVRNRTAEMVE 82
KK A ADR G L DM G KE++ R EA Y D + A AEM
Sbjct: 268 KKGA--ADRDGAL---LMDMEGLVTQKEKIVRVEEAEGNYSDDDDGLGAL--KTLAEMSA 320
Query: 83 AL 84
+L
Sbjct: 321 SL 322
Score = 41 (19.5 bits), Expect = 3.0e-42, Sum P(2) = 3.0e-42
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 1109 FPPADVALVLDSAVTSLQPCCSQNLPVYAEIQKCMGIIRNQILALIPTS 1157
F V LV+D L P + +I KC+ I + L P+S
Sbjct: 681 FDELGVELVMDIDCMPLNPLEYMPEGLRRQIDKCLAICKEARLNRHPSS 729
Score = 40 (19.1 bits), Expect = 3.8e-42, Sum P(2) = 3.8e-42
Identities = 19/71 (26%), Positives = 30/71 (42%)
Query: 399 ALQTLADLSLMMPETTADTELSLQLKEEKPEAVNE--SKLKGNRSSTGVKDTAIKTSKLG 456
ALQ +D M PE S + + +A + S K N S + A+ S +G
Sbjct: 792 ALQHTSDAQEMEPEMIEIVIESKSIAQAMVDAAIKAASSGKNNEDSENMVHQAL--SSIG 849
Query: 457 KDCTDDVSVIP 467
+ D S++P
Sbjct: 850 EHQPLDNSIVP 860
Score = 37 (18.1 bits), Expect = 3.2e-100, Sum P(4) = 3.2e-100
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 200 KDNTEKYISPIKQGLKPRLGSIDDDVAHEIA 230
K NT + +S K + ++D++ H I+
Sbjct: 348 KSNTLETVSTSHHREKAKQAGLEDNLLHAIS 378
>UNIPROTKB|Q5ZMF8 [details] [associations]
symbol:LIN9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584
GeneTree:ENSGT00390000003188 CTD:286826 HOGENOM:HOG000007517
HOVERGEN:HBG057743 OMA:NEPNETM OrthoDB:EOG4R502K EMBL:AADN02012179
EMBL:AJ719426 IPI:IPI00651557 RefSeq:NP_001026213.1
UniGene:Gga.20720 STRING:Q5ZMF8 Ensembl:ENSGALT00000015028
GeneID:421316 KEGG:gga:421316 InParanoid:Q5ZMF8 NextBio:20824100
Uniprot:Q5ZMF8
Length = 450
Score = 237 (88.5 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 63/187 (33%), Positives = 93/187 (49%)
Query: 602 DRAIKQKE--QLSNCLSWYQVRVWCVSEWFYSTIDYPWF-AKREFVEYL-DHVGLSHVPR 657
D+ QK +L N L + WC+ EWFYS ID P F +F L + +
Sbjct: 5 DKKASQKIGLRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRK 64
Query: 658 LTRVEWGVIRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHYSELRSGTKE--GLPTDLA 715
LTRVEWG IR +G+PRR S F +EE+ L Q R+ +R + + LP ++
Sbjct: 65 LTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADISQFKDLPDEIP 124
Query: 716 RPLYVGQRIIAVHPRTREICDG----SVLTVE--HSRYRVQFDKRELGIEFVQDIDCMPL 769
PL +G ++ A R R + DG + V+ ++ YRV FD+ LG + + D + +
Sbjct: 125 LPLVIGTKVTA---RLRGVHDGLFTGQIEAVDTLNATYRVTFDRAGLGTQTIPDYEVLSN 181
Query: 770 NPLENMP 776
P E MP
Sbjct: 182 EPHETMP 188
Score = 84 (34.6 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 823 YAPSHISPSTNY-PINNLLQQHKGVSYTDSEVHVGSTGQAKEEDVLALSHLRHALDKKEA 881
Y PS SP T+ P+ +S TDSE + G E ++ ++ L L K+
Sbjct: 210 YTPSLQSPITDSDPLLGQSSWKNKISGTDSE----TLGGFPVEFLIQVTRLSKILMIKKE 265
Query: 882 IVSELRCMNDEILENQKDGDNSFKDSELFKKHYAAILLQLNDINEQVASALFCLRQ 937
+ +LR MN E +K S S F++ YA I+L L +N+ + L ++Q
Sbjct: 266 HIKQLREMNTEA---EKLKSYSMPISIEFQRRYATIVLDLEQLNKDLNKVLHKVQQ 318
>UNIPROTKB|Q5TKA1 [details] [associations]
symbol:LIN9 "Protein lin-9 homolog" species:9606 "Homo
sapiens" [GO:0006260 "DNA replication" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_115566 GO:GO:0005654
GO:GO:0006260 eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584
GO:GO:0000278 CTD:286826 HOGENOM:HOG000007517 HOVERGEN:HBG057743
OrthoDB:EOG4R502K EMBL:AY786184 EMBL:AF190323 EMBL:AF190324
EMBL:AK126177 EMBL:BX537869 EMBL:BC043444 EMBL:BC045625
IPI:IPI00445335 IPI:IPI00844013 IPI:IPI01012571
RefSeq:NP_001257338.1 RefSeq:NP_001257339.1 RefSeq:NP_775106.2
UniGene:Hs.120817 IntAct:Q5TKA1 MINT:MINT-4054198 STRING:Q5TKA1
PhosphoSite:Q5TKA1 DMDM:74708186 PaxDb:Q5TKA1 PRIDE:Q5TKA1
Ensembl:ENST00000328205 Ensembl:ENST00000366801 GeneID:286826
KEGG:hsa:286826 UCSC:uc001hqa.2 UCSC:uc001hqb.2 UCSC:uc001hqc.3
GeneCards:GC01M226420 HGNC:HGNC:30830 HPA:HPA030241 MIM:609375
neXtProt:NX_Q5TKA1 PharmGKB:PA134970771 InParanoid:Q5TKA1
GenomeRNAi:286826 NextBio:96300 ArrayExpress:Q5TKA1 Bgee:Q5TKA1
CleanEx:HS_LIN9 Genevestigator:Q5TKA1 GermOnline:ENSG00000183814
Uniprot:Q5TKA1
Length = 542
Score = 235 (87.8 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 63/187 (33%), Positives = 92/187 (49%)
Query: 602 DRAIKQKE--QLSNCLSWYQVRVWCVSEWFYSTIDYPWF-AKREFVEYL-DHVGLSHVPR 657
D+ QK +L N L + WC+ EWFYS ID P F +F L + +
Sbjct: 98 DKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRK 157
Query: 658 LTRVEWGVIRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHYSELRSGTKE--GLPTDLA 715
LTRVEWG IR +G+PRR S F +EE+ L Q R+ +R + + LP ++
Sbjct: 158 LTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIP 217
Query: 716 RPLYVGQRIIAVHPRTREICDG----SVLTVE--HSRYRVQFDKRELGIEFVQDIDCMPL 769
PL +G ++ A R R + DG + V+ ++ YRV FD+ LG + D + +
Sbjct: 218 LPLVIGTKVTA---RLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSN 274
Query: 770 NPLENMP 776
P E MP
Sbjct: 275 EPHETMP 281
Score = 71 (30.1 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 823 YAPSHISPST-NYPINNLLQQHKGVSYTDSEVHVGSTGQAKEEDVLALSHLRHALDKKEA 881
Y P SP N P+ +S +D+E + G E ++ ++ L L K+
Sbjct: 303 YTPPLQSPIIDNDPLLGQSPWRSKISGSDTE----TLGGFPVEFLIQVTRLSKILMIKKE 358
Query: 882 IVSELRCMNDEILENQKDGDNSFKDSELFKKHYAAILLQLNDINEQVASALFCLRQ 937
+ +LR MN E +K S S F++ YA I+L+L +N+ + L ++Q
Sbjct: 359 HIKKLREMNTEA---EKLKSYSMPISIEFQRRYATIVLELEQLNKDLNKVLHKVQQ 411
Score = 60 (26.2 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 223 DDVAHEIALALTEASQRGGSLLVSQTPKRKRGKPSPVQKGSRTCDVSEM--NSSKPHGSE 280
D + E + A S + GSL + K + +PV KG T EM +SK
Sbjct: 5 DQLPDESSSAKALVSLKEGSLSNTWNEKYSSLQKTPVWKGRNTSSAVEMPFRNSKRSRLF 64
Query: 281 MDEDGRELSLGS 292
DED R+++ S
Sbjct: 65 SDEDDRQINTRS 76
>UNIPROTKB|C9J5J4 [details] [associations]
symbol:LIN9 "Protein lin-9 homolog" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] GO:GO:0005634 InterPro:IPR010561
Pfam:PF06584 HOGENOM:HOG000007517 HGNC:HGNC:30830 EMBL:AL359742
EMBL:BX284931 IPI:IPI00946841 ProteinModelPortal:C9J5J4
STRING:C9J5J4 Ensembl:ENST00000481685 UCSC:uc009xel.1
ArrayExpress:C9J5J4 Bgee:C9J5J4 Uniprot:C9J5J4
Length = 489
Score = 235 (87.8 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 63/187 (33%), Positives = 92/187 (49%)
Query: 602 DRAIKQKE--QLSNCLSWYQVRVWCVSEWFYSTIDYPWF-AKREFVEYL-DHVGLSHVPR 657
D+ QK +L N L + WC+ EWFYS ID P F +F L + +
Sbjct: 79 DKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRK 138
Query: 658 LTRVEWGVIRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHYSELRSGTKE--GLPTDLA 715
LTRVEWG IR +G+PRR S F +EE+ L Q R+ +R + + LP ++
Sbjct: 139 LTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIP 198
Query: 716 RPLYVGQRIIAVHPRTREICDG----SVLTVE--HSRYRVQFDKRELGIEFVQDIDCMPL 769
PL +G ++ A R R + DG + V+ ++ YRV FD+ LG + D + +
Sbjct: 199 LPLVIGTKVTA---RLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSN 255
Query: 770 NPLENMP 776
P E MP
Sbjct: 256 EPHETMP 262
Score = 71 (30.1 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 823 YAPSHISPST-NYPINNLLQQHKGVSYTDSEVHVGSTGQAKEEDVLALSHLRHALDKKEA 881
Y P SP N P+ +S +D+E + G E ++ ++ L L K+
Sbjct: 284 YTPPLQSPIIDNDPLLGQSPWRSKISGSDTE----TLGGFPVEFLIQVTRLSKILMIKKE 339
Query: 882 IVSELRCMNDEILENQKDGDNSFKDSELFKKHYAAILLQLNDINEQVASALFCLRQ 937
+ +LR MN E +K S S F++ YA I+L+L +N+ + L ++Q
Sbjct: 340 HIKKLREMNTEA---EKLKSYSMPISIEFQRRYATIVLELEQLNKDLNKVLHKVQQ 392
Score = 53 (23.7 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 212 QGLKPRLGSID----DDVAHEIALALTEASQRGGSLLVSQTPKRKRGKPSPVQKGSRTCD 267
Q LK R GS D + E + A S + GSL + K + +PV KG T
Sbjct: 6 QPLKKRRGSFKMAELDQLPDESSSAKALVSLKEGSLSNTWNEKYSSLQKTPVWKGRNTSS 65
Query: 268 VSEM 271
EM
Sbjct: 66 AVEM 69
>MGI|MGI:1919818 [details] [associations]
symbol:Lin9 "lin-9 homolog (C. elegans)" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
MGI:MGI:1919818 GO:GO:0005654 GO:GO:0006260 GO:GO:0007049
eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584
GeneTree:ENSGT00390000003188 CTD:286826 HOGENOM:HOG000007517
HOVERGEN:HBG057743 OMA:NEPNETM OrthoDB:EOG4R502K EMBL:AK042357
EMBL:AK052618 EMBL:AF190325 IPI:IPI00226441 IPI:IPI00515433
IPI:IPI00788457 RefSeq:NP_001096652.1 RefSeq:NP_780395.2
UniGene:Mm.275044 STRING:Q8C735 PhosphoSite:Q8C735 PaxDb:Q8C735
PRIDE:Q8C735 Ensembl:ENSMUST00000085803 Ensembl:ENSMUST00000085804
GeneID:72568 KEGG:mmu:72568 UCSC:uc007dwk.2 UCSC:uc007dwm.2
InParanoid:Q8C735 NextBio:336515 Bgee:Q8C735 CleanEx:MM_LIN9
Genevestigator:Q8C735 GermOnline:ENSMUSG00000058729 Uniprot:Q8C735
Length = 542
Score = 239 (89.2 bits), Expect = 1.2e-19, Sum P(4) = 1.2e-19
Identities = 65/189 (34%), Positives = 93/189 (49%)
Query: 602 DRAIKQKE--QLSNCLSWYQVRVWCVSEWFYSTIDYPWF-AKREFVEYL-DHVGLSHVPR 657
D+ QK +L N L + WC+ EWFYS ID P F +F L + +
Sbjct: 98 DKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRK 157
Query: 658 LTRVEWGVIRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHYSELRSGTKE--GLPTDLA 715
LTRVEWG IR +G+PRR S F +EE+ L Q R+ +R + + LP ++
Sbjct: 158 LTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIP 217
Query: 716 RPLYVGQRIIAVHPRTREICDG----SVLTVE--HSRYRVQFDKRELGIEFVQDIDCMPL 769
PL +G ++ A R R I DG + V+ ++ YRV FD+ LG + D + +
Sbjct: 218 LPLVIGTKVTA---RLRGIHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSN 274
Query: 770 NPLENMPAS 778
P E MP S
Sbjct: 275 EPHETMPIS 283
Score = 68 (29.0 bits), Expect = 1.2e-19, Sum P(4) = 1.2e-19
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 823 YAPSHISPSTNY-PINNLLQQHKGVSYTDSEVHVGSTGQAKEEDVLALSHLRHALDKKEA 881
Y P SP T+ P+ VS +D+E + G E ++ ++ L L K+
Sbjct: 303 YTPPLQSPITDGDPLLGQSPWRSKVSGSDTE----TLGGFPVEFLIQVTKLSKILMIKKE 358
Query: 882 IVSELRCMNDEILENQKDGDNSFKDSELFKKHYAAILLQLNDINEQVASALFCLRQ 937
+ +LR MN E +K S F++ YA I+L+L +N+ + L ++Q
Sbjct: 359 HIKKLREMNTEA---EKLKSYSMPIGIEFQRRYATIVLELEQLNKDLNKVLHKVQQ 411
Score = 52 (23.4 bits), Expect = 1.2e-19, Sum P(4) = 1.2e-19
Identities = 21/72 (29%), Positives = 31/72 (43%)
Query: 223 DDVAHEIALALTEASQRGGSLLVSQTPKRKRGKPSPVQKGSRTCDVSEM--NSSKPHGSE 280
D + E + A S + GSL + K + +PV KG EM +SK
Sbjct: 5 DQLPDESSSAKALVSLKEGSLSNTWNEKYSSLQKTPVWKGRNAGPAVEMPFRNSKRSRLF 64
Query: 281 MDEDGRELSLGS 292
DED R+++ S
Sbjct: 65 SDEDDRQINTKS 76
Score = 42 (19.8 bits), Expect = 1.2e-19, Sum P(4) = 1.2e-19
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 1017 EEAMDYVNNKLAGNDSGMPSIRSSTSADLV 1046
EEA + V A + SG P + + DL+
Sbjct: 437 EEAQEIVRQ--ANSASGQPCVENENLTDLI 464
>UNIPROTKB|H0Y322 [details] [associations]
symbol:LIN9 "Protein lin-9 homolog" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] GO:GO:0005634 InterPro:IPR010561
Pfam:PF06584 OMA:NEPNETM HGNC:HGNC:30830 EMBL:AL359742
EMBL:BX284931 ProteinModelPortal:H0Y322 Ensembl:ENST00000366808
Bgee:H0Y322 Uniprot:H0Y322
Length = 613
Score = 235 (87.8 bits), Expect = 4.0e-19, Sum P(3) = 4.0e-19
Identities = 63/187 (33%), Positives = 92/187 (49%)
Query: 602 DRAIKQKE--QLSNCLSWYQVRVWCVSEWFYSTIDYPWF-AKREFVEYL-DHVGLSHVPR 657
D+ QK +L N L + WC+ EWFYS ID P F +F L + +
Sbjct: 169 DKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRK 228
Query: 658 LTRVEWGVIRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHYSELRSGTKE--GLPTDLA 715
LTRVEWG IR +G+PRR S F +EE+ L Q R+ +R + + LP ++
Sbjct: 229 LTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIP 288
Query: 716 RPLYVGQRIIAVHPRTREICDG----SVLTVE--HSRYRVQFDKRELGIEFVQDIDCMPL 769
PL +G ++ A R R + DG + V+ ++ YRV FD+ LG + D + +
Sbjct: 289 LPLVIGTKVTA---RLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSN 345
Query: 770 NPLENMP 776
P E MP
Sbjct: 346 EPHETMP 352
Score = 71 (30.1 bits), Expect = 4.0e-19, Sum P(3) = 4.0e-19
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 823 YAPSHISPST-NYPINNLLQQHKGVSYTDSEVHVGSTGQAKEEDVLALSHLRHALDKKEA 881
Y P SP N P+ +S +D+E + G E ++ ++ L L K+
Sbjct: 374 YTPPLQSPIIDNDPLLGQSPWRSKISGSDTE----TLGGFPVEFLIQVTRLSKILMIKKE 429
Query: 882 IVSELRCMNDEILENQKDGDNSFKDSELFKKHYAAILLQLNDINEQVASALFCLRQ 937
+ +LR MN E +K S S F++ YA I+L+L +N+ + L ++Q
Sbjct: 430 HIKKLREMNTEA---EKLKSYSMPISIEFQRRYATIVLELEQLNKDLNKVLHKVQQ 482
Score = 54 (24.1 bits), Expect = 4.0e-19, Sum P(3) = 4.0e-19
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 237 SQRGGSLLVSQTPKRKRGKPSPVQKGSRTCDVSEM--NSSKPHGSEMDEDGRELSLGS 292
S + GSL + K + +PV KG T EM +SK DED R+++ S
Sbjct: 90 SLKEGSLSNTWNEKYSSLQKTPVWKGRNTSSAVEMPFRNSKRSRLFSDEDDRQINTRS 147
>UNIPROTKB|F1MIQ3 [details] [associations]
symbol:LOC534587 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
InterPro:IPR010561 Pfam:PF06584 GeneTree:ENSGT00390000003188
OMA:NEPNETM EMBL:DAAA02042671 IPI:IPI00841368
Ensembl:ENSBTAT00000047257 Uniprot:F1MIQ3
Length = 541
Score = 235 (87.8 bits), Expect = 5.8e-19, Sum P(3) = 5.8e-19
Identities = 63/187 (33%), Positives = 92/187 (49%)
Query: 602 DRAIKQKE--QLSNCLSWYQVRVWCVSEWFYSTIDYPWF-AKREFVEYL-DHVGLSHVPR 657
D+ QK +L N L + WC+ EWFYS ID P F +F L + +
Sbjct: 98 DKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRK 157
Query: 658 LTRVEWGVIRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHYSELRSGTKE--GLPTDLA 715
LTRVEWG IR +G+PRR S F +EE+ L Q R+ +R + + LP ++
Sbjct: 158 LTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIP 217
Query: 716 RPLYVGQRIIAVHPRTREICDG----SVLTVE--HSRYRVQFDKRELGIEFVQDIDCMPL 769
PL +G ++ A R R + DG + V+ ++ YRV FD+ LG + D + +
Sbjct: 218 LPLVIGTKVTA---RLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSN 274
Query: 770 NPLENMP 776
P E MP
Sbjct: 275 EPHETMP 281
Score = 68 (29.0 bits), Expect = 5.8e-19, Sum P(3) = 5.8e-19
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 827 HISPSTNYPINN---LLQQ---HKGVSYTDSEVHVGSTGQAKEEDVLALSHLRHALDKKE 880
H +P PI++ LL Q +S +D+E + G E ++ ++ L L K+
Sbjct: 301 HYTPPLQSPIHDNDPLLGQSPWRSKISGSDTE----TLGGFPVEFLIQVTRLSKILMIKK 356
Query: 881 AIVSELRCMNDEILENQKDGDNSFKDSELFKKHYAAILLQLNDINEQVASALFCLRQ 937
+ +LR MN E +K S F++ YA I+L+L +N+ + L ++Q
Sbjct: 357 EHIKKLREMNTEA---EKLKSYSMPIGIEFQRRYATIVLELEQLNKDLNKVLHKVQQ 410
Score = 52 (23.4 bits), Expect = 5.8e-19, Sum P(3) = 5.8e-19
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 237 SQRGGSLLVSQTPKRKRGKPSPVQKGSRTCDVSEM--NSSKPHGSEMDEDGRELSLGS 292
S + GSL + K + +PV KG T EM +SK DED R+++ S
Sbjct: 19 SLKEGSLSNTWNEKYSSLQKTPVWKGRNTGSAVEMPFRNSKRSRLFSDEDDRQINTRS 76
>UNIPROTKB|F1PWI7 [details] [associations]
symbol:LIN9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
InterPro:IPR010561 Pfam:PF06584 GeneTree:ENSGT00390000003188
EMBL:AAEX03005273 EMBL:AAEX03005274 Ensembl:ENSCAFT00000038412
Uniprot:F1PWI7
Length = 490
Score = 235 (87.8 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 63/187 (33%), Positives = 92/187 (49%)
Query: 602 DRAIKQKE--QLSNCLSWYQVRVWCVSEWFYSTIDYPWF-AKREFVEYL-DHVGLSHVPR 657
D+ QK +L N L + WC+ EWFYS ID P F +F L + +
Sbjct: 46 DKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRK 105
Query: 658 LTRVEWGVIRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHYSELRSGTKE--GLPTDLA 715
LTRVEWG IR +G+PRR S F +EE+ L Q R+ +R + + LP ++
Sbjct: 106 LTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIP 165
Query: 716 RPLYVGQRIIAVHPRTREICDG----SVLTVE--HSRYRVQFDKRELGIEFVQDIDCMPL 769
PL +G ++ A R R + DG + V+ ++ YRV FD+ LG + D + +
Sbjct: 166 LPLVIGTKVTA---RLRGVHDGLFTGQIDAVDTFNATYRVTFDRAGLGTHTIPDYEVLSN 222
Query: 770 NPLENMP 776
P E MP
Sbjct: 223 EPHETMP 229
Score = 72 (30.4 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 823 YAPSHISPST-NYPINNLLQQHKGVSYTDSEVHVGSTGQAKEEDVLALSHLRHALDKKEA 881
Y P SP T N P+ +S +D+E + G E ++ ++ L L K+
Sbjct: 251 YTPPLQSPITDNDPLLGQSPWRSKISGSDTE----TLGGFPVEFLIQVTKLSKILMIKKE 306
Query: 882 IVSELRCMNDEILENQKDGDNSFKDSELFKKHYAAILLQLNDINEQVASALFCLRQ 937
+ +LR MN E +K S F++ YA I+L+L +N+ + L ++Q
Sbjct: 307 HIKKLREMNTEA---EKLKSYSMPIGIEFQRRYATIVLELEQLNKDLNKVLHKVQQ 359
>ZFIN|ZDB-GENE-030131-1747 [details] [associations]
symbol:lin9 "lin-9 homolog (C. elegans)"
species:7955 "Danio rerio" [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
ZFIN:ZDB-GENE-030131-1747 GO:GO:0005634 GO:GO:0051726
eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584
GeneTree:ENSGT00390000003188 EMBL:BX470188 IPI:IPI00483095
RefSeq:NP_001038411.1 UniGene:Dr.76676 Ensembl:ENSDART00000045185
GeneID:560867 KEGG:dre:560867 CTD:286826 HOGENOM:HOG000007517
HOVERGEN:HBG057743 InParanoid:Q5RHQ8 OMA:NEPNETM OrthoDB:EOG4R502K
NextBio:20883652 ArrayExpress:Q5RHQ8 Bgee:Q5RHQ8 Uniprot:Q5RHQ8
Length = 543
Score = 264 (98.0 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 85/262 (32%), Positives = 124/262 (47%)
Query: 529 SSTDHEKEGNNSASSTAHVRTANQVNLPTKVRSRRKMNMQKLLIERDKMSSEDILKSSED 588
S+T +EK N S T R++ V++ T RS ++ + ER ++S +S
Sbjct: 26 SNTLNEKN-NLPKSQTTRGRSS-YVSMETPTRSSKRSRLSCEDEERP-IASRSPRRSQRV 82
Query: 589 IFNDQNRTNSSFFDRAIKQKE--QLSNCLSWYQVRVWCVSEWFYSTIDYPWF-AKREFVE 645
Q TN + D+ + QK +L N L + WC+ EWFYS ID P F +F
Sbjct: 83 TTMPQKLTNVATPDKRVSQKIGLRLRNLLKLPKAHKWCIYEWFYSNIDRPLFEGDNDFCL 142
Query: 646 YL-DHVGLSHVPRLTRVEWGVIRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHYSELRS 704
L + +LTRVEWG IR +G+PRR S F EE+ L Q R+ +R +
Sbjct: 143 CLKESFPNLKTRKLTRVEWGTIRRLMGKPRRCSSAFFAEERMALKQKRQKMRLLQQRKIT 202
Query: 705 GTK--EGLPTDLARPLYVGQRIIAVHPRTREICDG----SVLTVEHSR--YRVQFDKREL 756
+ LP ++ PL +G ++ A R R + DG + V+ S YRV FD+ L
Sbjct: 203 DMSLCKDLPDEIPLPLVIGTKVTA---RLRGVHDGLFTGQIDAVDTSAATYRVTFDRNGL 259
Query: 757 GIEFVQDIDCMPLNPLENMPAS 778
G V D + + P E MP S
Sbjct: 260 GTHTVPDYEVLSNEPHETMPIS 281
Score = 42 (19.8 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 878 KKEAIVSELRCMNDEILENQKDGDNSFKDSELFKKHYAAILLQLNDINEQVASALFCLRQ 937
KKE I L+ MN E +K S +K YA +L L +N+ + L ++Q
Sbjct: 356 KKEHI-KHLKEMNTEA---EKLKSYSMPIGLDLQKRYATTVLDLEQLNKDLNKVLHEVQQ 411
>RGD|1591104 [details] [associations]
symbol:Lin9 "lin-9 homolog (C. elegans)" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] REFSEQ:XM_003752692 Ncbi:XP_003752740
Length = 552
Score = 236 (88.1 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 64/187 (34%), Positives = 92/187 (49%)
Query: 602 DRAIKQKE--QLSNCLSWYQVRVWCVSEWFYSTIDYPWF-AKREFVEYL-DHVGLSHVPR 657
D+ QK +L N L + WC+ EWFYS ID P F +F L + +
Sbjct: 108 DKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRK 167
Query: 658 LTRVEWGVIRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHYSELRSGTKE--GLPTDLA 715
LTRVEWG IR +G+PRR S F +EE+ L Q R+ +R + + LP ++
Sbjct: 168 LTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIP 227
Query: 716 RPLYVGQRIIAVHPRTREICDG----SVLTVE--HSRYRVQFDKRELGIEFVQDIDCMPL 769
PL +G ++ A R R I DG + V+ ++ YRV FD+ LG + D + +
Sbjct: 228 LPLVIGTKVTA---RLRGIHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSN 284
Query: 770 NPLENMP 776
P E MP
Sbjct: 285 EPHETMP 291
Score = 67 (28.6 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 823 YAPSHISPSTNY-PINNLLQQHKGVSYTDSEVHVGSTGQAKEEDVLALSHLRHALDKKEA 881
Y P SP T+ P+ +S +D+E + G E ++ ++ L L K+
Sbjct: 313 YTPPLQSPITDGDPLLGQSPWRSKISGSDTE----TLGGFPVEFLIQVTKLSKILMIKKE 368
Query: 882 IVSELRCMNDEILENQKDGDNSFKDSELFKKHYAAILLQLNDINEQVASALFCLRQ 937
+ +LR MN E +K S F++ YA I+L+L +N+ + L ++Q
Sbjct: 369 HIKKLREMNTEA---EKLKSYSMPIGIEFQRRYATIVLELEQLNKDLNKVLHKVQQ 421
Score = 42 (19.8 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 1017 EEAMDYVNNKLAGNDSGMPSIRSSTSADLV 1046
EEA + V A + SG P + + DL+
Sbjct: 447 EEAQEIVRQ--ANSASGQPCVENENLTDLI 474
>DICTYBASE|DDB_G0286665 [details] [associations]
symbol:lin9 "RmlC-like cupin family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0286665 GenomeReviews:CM000153_GR EMBL:AAFI02000089
eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584 RefSeq:XP_637607.1
EnsemblProtists:DDB0232078 GeneID:8625747 KEGG:ddi:DDB_G0286665
InParanoid:Q54LF4 OMA:EVMSADK Uniprot:Q54LF4
Length = 999
Score = 174 (66.3 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 55/208 (26%), Positives = 100/208 (48%)
Query: 527 HTSSTDHEKEGNNSASSTAHVRTANQVNLPTKVRSRRKMNMQK--LLIERDK----MSSE 580
+ +++++ +NS +S + T +N + + +++ Q L E DK + S+
Sbjct: 464 NNNNSNNNSNSSNSNNSVGNNSTDGNINYTQQQQQQQQQQQQNHPTLNENDKNDILLPSK 523
Query: 581 D----ILKSSEDIFNDQNRTNSSFFDRAIKQKEQLSNCLSWYQVR---VWCVSEWFYSTI 633
+ I K + + Q +T S+ ++ S+ + ++ W EWFYS +
Sbjct: 524 EVQSVIQKKLVNFLSKQKQTKSNSKNKTTSSSSSSSSSSNENKLSNPGKWAYYEWFYSDL 583
Query: 634 DYPWFAKREFVEYLDHVGLSHVPRLTRVEWGVIRSSLGRPRRFSEQFLKEEKEKLNQYRE 693
D P++ EF + +S +LT+ EW IRS + +PRR S+QF E + KL RE
Sbjct: 584 DTPFYFYNEFQLLIHQFPISK--KLTKTEWNSIRSKMRKPRRLSKQFYDEARSKLYHTRE 641
Query: 694 SVRNHYSELRSGTKEGLPTDL-ARPLYV 720
+VR YS L + + L + +R LY+
Sbjct: 642 TVR--YSMLNNDHLKFLQIEPDSRVLYL 667
Score = 92 (37.4 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 23/83 (27%), Positives = 46/83 (55%)
Query: 1072 DSTLNNSSDENSAHIPLELIAHCVAALFMIQ-RCTERDFPPADVALVLDSAVTSLQPCC- 1129
D N+ SDEN A ELI C+ +F I+ +C +F D+ + ++ + ++P
Sbjct: 914 DKNDNDQSDENQAL--RELIIGCIGFIFQIKNQCVNIEFSSEDLDFLFETCLNQIKPKSD 971
Query: 1130 -SQNLPVYAEIQKCMGIIRNQIL 1151
++NL ++ EI++ + I+ +I+
Sbjct: 972 STENLVLFNEIERDVETIKKRIV 994
Score = 81 (33.6 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 43 LGPQWSKEELERFYEAYRKYGK-DWKKIAAAVRNRTAEMVEALFTMN---RAYLSLPEGT 98
LGP+W +E+ Y K K +W+ I NRT EM+E ++ ++ + L PE
Sbjct: 40 LGPEWDIKEITDLYNIIIKNEKPEWRSILKKFPNRTEEMLEYIYKLSCTTKFILDSPEHF 99
Query: 99 ASVV-GLIA 106
S + G+ A
Sbjct: 100 FSFIQGVYA 108
Score = 67 (28.6 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 34/181 (18%), Positives = 77/181 (42%)
Query: 432 NESKLKGNRSSTGVKDTAIKTSKLGKDCTD-DVSVIPESEEG------NHLTNSGNRTKR 484
N + + N +S +++ + +G + TD +++ + ++ NH T + N K
Sbjct: 458 NNNSINNNNNSNNNSNSSNSNNSVGNNSTDGNINYTQQQQQQQQQQQQNHPTLNEN-DKN 516
Query: 485 QKFLPIK-LRMDATEELKKFISKGKRSLSASQSKHGKLVKPPEHTSSTDHEKEGNNSASS 543
LP K ++ ++L F+SK K++ S S++K +SS+ +E + +N
Sbjct: 517 DILLPSKEVQSVIQKKLVNFLSKQKQTKSNSKNK---TTSSSSSSSSSSNENKLSNPGKW 573
Query: 544 TAHVRTANQVNLPTKVRSRRKMNMQKLLIERDKMSSEDILKSSEDIFNDQNRTNSSFFDR 603
+ + ++ P + ++ + + I + +E S R + F+D
Sbjct: 574 AYYEWFYSDLDTPFYFYNEFQLLIHQFPISKKLTKTE--WNSIRSKMRKPRRLSKQFYDE 631
Query: 604 A 604
A
Sbjct: 632 A 632
Score = 50 (22.7 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 24/131 (18%), Positives = 52/131 (39%)
Query: 976 ESGPHVVEVVESSRSKAQKMVDVAVQALSSLEKEGNGIERIEEAMDYVNNKLAGNDSGMP 1035
++ +++V +S A K + V ++ KE + + G
Sbjct: 692 DTNNQLIDVPDSEVMSADKDIRVFIEQTHLQSKEKSSTTTTATTTTNTTTQSGGK----- 746
Query: 1036 SIRSSTSADLVHSSRNSQDQQLETHTTNLLANSRAPDSTLNNSSDENSAHI---PLELIA 1092
R +L +S NS + + N N+ ++ NN+++ NS+ I P +++
Sbjct: 747 --RKFDELNLPTTSTNSCKNNINVQSANNNNNNNNNNNNNNNNNNNNSSTILTDPDQVVT 804
Query: 1093 HCVAALFMIQR 1103
V L +++R
Sbjct: 805 LVVGLLEVLER 815
Score = 44 (20.5 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 917 ILLQLNDINEQVASALF 933
+LL++N++NEQ + +F
Sbjct: 819 LLLKINEMNEQAKTMVF 835
>WB|WBGene00002998 [details] [associations]
symbol:lin-9 species:6239 "Caenorhabditis elegans"
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IGI;IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0008584 "male gonad development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0070176 "DRM complex" evidence=IDA] GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0006355 GO:GO:0010171 GO:GO:0040011 GO:GO:0006351
GO:GO:0008584 GO:GO:0040035 eggNOG:NOG148048 InterPro:IPR010561
Pfam:PF06584 GO:GO:0045138 GO:GO:0040027 EMBL:Z11115 GO:GO:0070176
EMBL:AF269693 EMBL:AF269694 PIR:A88542 PIR:S15794
RefSeq:NP_001023015.1 RefSeq:NP_001023016.1 UniGene:Cel.19461
ProteinModelPortal:P30630 STRING:P30630 PaxDb:P30630 PRIDE:P30630
EnsemblMetazoa:ZK637.7b.1 EnsemblMetazoa:ZK637.7b.2 GeneID:176256
KEGG:cel:CELE_ZK637.7 UCSC:ZK637.7b.2 CTD:176256 WormBase:ZK637.7a
WormBase:ZK637.7b GeneTree:ENSGT00390000003188 HOGENOM:HOG000018119
InParanoid:P30630 OMA:KPRRCSQ NextBio:891788 Uniprot:P30630
Length = 644
Score = 197 (74.4 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 71/227 (31%), Positives = 106/227 (46%)
Query: 550 ANQVNLPTKVRSRRKM-NMQKLLIERDKMSSEDILKSSEDIFNDQNRTNSSFFDRAIKQK 608
AN N + R + NM ER M + K+ + +Q + S F RA +K
Sbjct: 154 ANMTNEAVEHRDTQSFFNMFSTDQERSAMMKQ--FKT----YKNQTSEDVSTFMRANIKK 207
Query: 609 EQLSNCLSWYQVRVWCVSEWFYSTIDYPWFAKR-EFVEYL--DHVGLSHVPRLTRVEWGV 665
L N L + + R W + E+FYS ID F + EF + L + LTR+EW
Sbjct: 208 --LYNLLRYKKARQWVMCEFFYSAIDEQIFKEENEFATIIRESFPNLKNW-NLTRIEWRS 264
Query: 666 IRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHY--SELRSGTKE--GLPTDLARPLYVG 721
IR LG+PRR S+ F +EE+ L + R +R+ Y S L + + LP L RP+ VG
Sbjct: 265 IRKLLGKPRRCSKVFFEEERMYLEEKRMKIRSVYEGSYLNDPSIDLKDLPAKLPRPMVVG 324
Query: 722 QRIIA-VHPRTREICDGSVLTVEHSRYRVQFDKRELGIEFVQDIDCM 767
R+ A + I G + V +R+ FDK ++ V D + +
Sbjct: 325 NRVFARIRNPYDGIYSGIIDAVIPKGFRIIFDKPDIPPTLVSDTEIL 371
Score = 77 (32.2 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 30/157 (19%), Positives = 68/157 (43%)
Query: 869 LSHLRHALDKKEAIVSELRCMN-DEILENQKDGDNSFKDSELFKKHYAAILLQLNDINEQ 927
L L +D K+ ++ +L +N D ++N S K S+ F++ YA ++ L +N+
Sbjct: 455 LVKLTKLIDIKKGLIRQLNELNADAEIQNM----TSDKYSKAFQEKYAKTIIDLEHVNQN 510
Query: 928 VASALFCLRQRNTY-QGNTCLTG-LKPMSXXXXXXXXXPNSFDHSAYQTPESGPHVVEVV 985
+ + ++ + Y N T +KP + +H H + ++
Sbjct: 511 IDINMNGIQDHHMYFSSNDISTSNMKPEAVRQMCSQQAGRFVEHCNQGLNVENVHALTLI 570
Query: 986 ESSRSKAQKMVDVAVQALSSLEKE--GNGIERIEEAM 1020
+S + ++ + Q +S+++ + G+ I I A+
Sbjct: 571 QSLTAVLLQVRTMGTQKISAVDLQSLGDAISEIRTAI 607
Score = 39 (18.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 1020 MDYVNNKL-AGNDSGMPSIRSSTSADLVHSSRNSQDQQLETHTTNLLANSRAPDSTLNNS 1078
++ N+KL +G + ++R S+ LV S+ ++E L+ + D LN
Sbjct: 385 IEQANSKLPSGVRPFVAAVRDSSHPHLVRDVLVSR--KIERSGGPLMGPN---DERLNGK 439
Query: 1079 SDENSAHIPLELIAHCV 1095
+ E + PL+ + + V
Sbjct: 440 NAEMVGNFPLKFLVNLV 456
>UNIPROTKB|P30630 [details] [associations]
symbol:lin-9 "Protein lin-9" species:6239 "Caenorhabditis
elegans" [GO:0070176 "DRM complex" evidence=IDA] GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0006355 GO:GO:0010171 GO:GO:0040011 GO:GO:0006351
GO:GO:0008584 GO:GO:0040035 eggNOG:NOG148048 InterPro:IPR010561
Pfam:PF06584 GO:GO:0045138 GO:GO:0040027 EMBL:Z11115 GO:GO:0070176
EMBL:AF269693 EMBL:AF269694 PIR:A88542 PIR:S15794
RefSeq:NP_001023015.1 RefSeq:NP_001023016.1 UniGene:Cel.19461
ProteinModelPortal:P30630 STRING:P30630 PaxDb:P30630 PRIDE:P30630
EnsemblMetazoa:ZK637.7b.1 EnsemblMetazoa:ZK637.7b.2 GeneID:176256
KEGG:cel:CELE_ZK637.7 UCSC:ZK637.7b.2 CTD:176256 WormBase:ZK637.7a
WormBase:ZK637.7b GeneTree:ENSGT00390000003188 HOGENOM:HOG000018119
InParanoid:P30630 OMA:KPRRCSQ NextBio:891788 Uniprot:P30630
Length = 644
Score = 197 (74.4 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 71/227 (31%), Positives = 106/227 (46%)
Query: 550 ANQVNLPTKVRSRRKM-NMQKLLIERDKMSSEDILKSSEDIFNDQNRTNSSFFDRAIKQK 608
AN N + R + NM ER M + K+ + +Q + S F RA +K
Sbjct: 154 ANMTNEAVEHRDTQSFFNMFSTDQERSAMMKQ--FKT----YKNQTSEDVSTFMRANIKK 207
Query: 609 EQLSNCLSWYQVRVWCVSEWFYSTIDYPWFAKR-EFVEYL--DHVGLSHVPRLTRVEWGV 665
L N L + + R W + E+FYS ID F + EF + L + LTR+EW
Sbjct: 208 --LYNLLRYKKARQWVMCEFFYSAIDEQIFKEENEFATIIRESFPNLKNW-NLTRIEWRS 264
Query: 666 IRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHY--SELRSGTKE--GLPTDLARPLYVG 721
IR LG+PRR S+ F +EE+ L + R +R+ Y S L + + LP L RP+ VG
Sbjct: 265 IRKLLGKPRRCSKVFFEEERMYLEEKRMKIRSVYEGSYLNDPSIDLKDLPAKLPRPMVVG 324
Query: 722 QRIIA-VHPRTREICDGSVLTVEHSRYRVQFDKRELGIEFVQDIDCM 767
R+ A + I G + V +R+ FDK ++ V D + +
Sbjct: 325 NRVFARIRNPYDGIYSGIIDAVIPKGFRIIFDKPDIPPTLVSDTEIL 371
Score = 77 (32.2 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 30/157 (19%), Positives = 68/157 (43%)
Query: 869 LSHLRHALDKKEAIVSELRCMN-DEILENQKDGDNSFKDSELFKKHYAAILLQLNDINEQ 927
L L +D K+ ++ +L +N D ++N S K S+ F++ YA ++ L +N+
Sbjct: 455 LVKLTKLIDIKKGLIRQLNELNADAEIQNM----TSDKYSKAFQEKYAKTIIDLEHVNQN 510
Query: 928 VASALFCLRQRNTY-QGNTCLTG-LKPMSXXXXXXXXXPNSFDHSAYQTPESGPHVVEVV 985
+ + ++ + Y N T +KP + +H H + ++
Sbjct: 511 IDINMNGIQDHHMYFSSNDISTSNMKPEAVRQMCSQQAGRFVEHCNQGLNVENVHALTLI 570
Query: 986 ESSRSKAQKMVDVAVQALSSLEKE--GNGIERIEEAM 1020
+S + ++ + Q +S+++ + G+ I I A+
Sbjct: 571 QSLTAVLLQVRTMGTQKISAVDLQSLGDAISEIRTAI 607
Score = 39 (18.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 1020 MDYVNNKL-AGNDSGMPSIRSSTSADLVHSSRNSQDQQLETHTTNLLANSRAPDSTLNNS 1078
++ N+KL +G + ++R S+ LV S+ ++E L+ + D LN
Sbjct: 385 IEQANSKLPSGVRPFVAAVRDSSHPHLVRDVLVSR--KIERSGGPLMGPN---DERLNGK 439
Query: 1079 SDENSAHIPLELIAHCV 1095
+ E + PL+ + + V
Sbjct: 440 NAEMVGNFPLKFLVNLV 456
>FB|FBgn0023509 [details] [associations]
symbol:mip130 "Myb-interacting protein 130" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0007307 "eggshell chorion gene amplification"
evidence=IC] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000785
"chromatin" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0051297
"centrosome organization" evidence=IMP] GO:GO:0005634 GO:GO:0007052
GO:GO:0051297 GO:GO:0003677 EMBL:AE014298 GO:GO:0000785
GO:GO:0000122 GO:GO:0005700 InterPro:IPR010561 Pfam:PF06584
GO:GO:0031523 GO:GO:0007307 GeneTree:ENSGT00390000003188
FlyBase:FBgn0023509 EMBL:AY819021 EMBL:BT021408 RefSeq:NP_569958.2
UniGene:Dm.33569 DIP:DIP-18949N IntAct:Q9W542 MINT:MINT-1730938
STRING:Q9W542 EnsemblMetazoa:FBtr0070315 GeneID:31153
KEGG:dme:Dmel_CG3480 UCSC:CG3480-RA CTD:31153 InParanoid:Q9W542
OMA:SENFHEM GenomeRNAi:31153 NextBio:772187 Uniprot:Q9W542
Length = 986
Score = 194 (73.4 bits), Expect = 5.6e-11, Sum P(3) = 5.6e-11
Identities = 61/193 (31%), Positives = 98/193 (50%)
Query: 610 QLSNCLSWYQVRVWCVSEWFYSTIDYPWFAKREFVEYLDHVGLSHVPRL-TRV----EWG 664
+L N L + W ++EWFYS +D P F R+ E+++HV PRL TR EW
Sbjct: 292 RLRNLLKLPKAHKWAIAEWFYSYVDKPLFECRD--EFMNHVN-ELAPRLGTRSLIRHEWV 348
Query: 665 VIRSSLGRPRRFSEQFLKEEKEKLNQYRESVRNHYSELRSGTKEG------LPTDLARPL 718
IR +GRPRR S +F EE+++L++ R+ +R S K+ +P + L
Sbjct: 349 NIRRRMGRPRRCSAKFFSEERKELDRKRQVIRTLQSRKPGEFKDSVSMLSDMPEKIPMTL 408
Query: 719 YVGQRIIAVHPRTRE-ICDGSVLTVE--HSRYRVQFDKRELGIEFVQDIDCMPLNPLENM 775
+G ++ A ++ I G+V + ++ YRV F++ LG + D + + N E +
Sbjct: 409 PLGTKVTARLRSPQDGIFAGTVAAYDSLNAMYRVTFERIGLGTHAIPDYEIVSENFHEML 468
Query: 776 PA-SLT---RPNV 784
P S T RPN+
Sbjct: 469 PLHSFTKDFRPNL 481
Score = 54 (24.1 bits), Expect = 5.6e-11, Sum P(3) = 5.6e-11
Identities = 33/152 (21%), Positives = 60/152 (39%)
Query: 430 AVNESKLKGNRSSTGVKDTAIKTSKLGKDCTDDVSVIPESEEGNHLTNSGNRTKRQKFLP 489
AVN+ K G ++ V D+AI+T + + V P E + NR
Sbjct: 12 AVNQ-KGWGKKAGASVSDSAIRTQSALSEGGGAIDVRP-MEHDEEI----NREDLNLDED 65
Query: 490 IKLRMDATEELKKFISKGKRSLSASQSKHGKLVKPPEHTSST-DHEKEGN----NSASST 544
++ + EE + S S + V+PP + +T ++ G+
Sbjct: 66 DEMEEEEEEEHADEEDDDEEPDSNENSAPEEQVEPPAFSLATLGLQRVGSAPPPKPKVQK 125
Query: 545 AHVRTANQVNLPTKVRSRRKMNMQKLLIERDK 576
A + T N +P ++R R ++ + +I DK
Sbjct: 126 APIPTLNARGMPARIRKRNRLFYDENIINDDK 157
Score = 49 (22.3 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 23/90 (25%), Positives = 37/90 (41%)
Query: 170 LSLLKKRRSGSRPRAVAK-RTPRVPVSYSY----DKDNTEKYISPIKQGLKPRLGSIDDD 224
+SL K+ G P++ + ++P++ S K +Y+ +QG S
Sbjct: 161 MSLAPKKTPGRPPQSAGGGSSQKIPLTPSKVLKKRKGVVSRYMRSSEQGTNSVSASNQPQ 220
Query: 225 VAHEIALALTEASQRGGSLLVSQTPKRKRG 254
+ + A SQ GS L S PK RG
Sbjct: 221 LLGKHKKATPSKSQSVGSKLGSGGPKTGRG 250
Score = 44 (20.5 bits), Expect = 5.6e-11, Sum P(3) = 5.6e-11
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 1008 KEGNGIERIE-EAMDYVNNKLAGNDSGMPSIRSSTSADLVHSSRNSQDQQLETHTTNL 1064
K+ G E E + MD+ ++ + + + S S + ++S+ QD+ +T +L
Sbjct: 828 KQVEGKENSEVDKMDHSSHPMDTDTEKEEKLESGGSENAGYASQQRQDEDQDTEEQHL 885
Score = 37 (18.1 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 423 LKEEKPEAVNESKLKGNRSSTGVKDTAIKTSKLGKDCTDDVSVIPESEE-GNHLTNSGNR 481
L + K ++S+ G++ +G T +GK V+ + +EE N +
Sbjct: 222 LGKHKKATPSKSQSVGSKLGSGGPKTGRGAHFIGKGTAAAVAAVAAAEEEANQAEAAALA 281
Query: 482 TKRQ-KFLPIKLR 493
KR + + ++LR
Sbjct: 282 NKRLGQSIGLRLR 294
>DICTYBASE|DDB_G0293562 [details] [associations]
symbol:DDB_G0293562 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0293562 EMBL:AAFI02000218 eggNOG:NOG253936
InterPro:IPR014898 Pfam:PF08790 RefSeq:XP_629009.1
ProteinModelPortal:Q54BM0 EnsemblProtists:DDB0192009 GeneID:8629293
KEGG:ddi:DDB_G0293562 InParanoid:Q54BM0 OMA:ECASTVI
ProtClustDB:CLSZ2846558 Uniprot:Q54BM0
Length = 527
Score = 131 (51.2 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 77/436 (17%), Positives = 181/436 (41%)
Query: 175 KRRSGSRPRAVAKRTPRVPVSYSYDKDNTEKYISPIKQGLKPRLGSIDDDVAHEIA-LAL 233
KR+ + AK+ +V S S D +++ S + K + + I +
Sbjct: 93 KRKLEENKKEEAKKKKKVESSDSSDSSSSDSSSSESEDEKKKKKEIKKVETKKPIKKVES 152
Query: 234 TEASQRGGSLLVSQTPKRKR-GKPSPVQK-GSRTCDVSEMNSSKPHGSEMDEDGRELSLG 291
+++S S S+ K+K+ K +K ++ + ++ + K S+ D + S
Sbjct: 153 SDSSDSDSSDSSSEDEKKKKDNKKVETKKVETKKVETKKVETKKEESSDSDSSDSDSSSS 212
Query: 292 STDADNGYYSRD--KIYLMDAET-ADTVEIQQKGKRYHSKKL--KQEESVSNHLDDIKEA 346
+++++ +D K+ + E+ +++ E + + + +KK+ K+EES + ++
Sbjct: 213 ESESEDEKKKKDTKKVEIKKEESESESSESESEDENKDNKKVGTKKEESSDS------DS 266
Query: 347 CSGTEEGQDMVVMKGKFAMEIADEXXXXXXXXXXXXXXXXXXXXXDESSEFDALQTLADL 406
S E +D K +E E ES D +
Sbjct: 267 SSSESESEDEKKKKNNKKVEAKKEESSDSESESESESSSSSSSSSSESESEDEKKKKDSK 326
Query: 407 SL-MMPETTADTELSLQLKEEKPEAVNESKLKGNRSSTGVKDTAIKTSKLGKDCTDDVSV 465
+ E ++D+E S + E++ + + ++K SS +++ S K+ + + +
Sbjct: 327 KVETKKEGSSDSESSSESVEDEKMDIEKVEIKKEESSDS--ESSSPASSESKE-EEKMDI 383
Query: 466 IPESEEGNHLTNSGNRTKRQKFLPIKLRMDATEELKKFISKGKRSLSASQSKHGKLVKPP 525
E + ++S + ++ ++ K D+ +E + K + S S+S+S+ K +
Sbjct: 384 EKEETKKEESSSSSSESEEEQKKSKKEDSDS-DESSEDEKKKEESSSSSESEDEKKKEDS 442
Query: 526 EHTSSTDHEKEGNNSASSTAHVRTANQV---NLPTKVRSRRKMNMQKLLIERDKMSSEDI 582
+ SS D +K+ ++ +SS++ ++ + ++ S ++ + E D SS D
Sbjct: 443 DSESSEDEKKKEDSDSSSSSESEDEDKKKKDSSSSESESEKESDSSSSSSESDSSSSSDS 502
Query: 583 LKSSEDIFNDQNRTNS 598
SS + + ++S
Sbjct: 503 DSSSSSSSSSSSSSSS 518
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.128 0.359 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1158 1116 0.00089 123 3 11 23 0.46 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 625 (66 KB)
Total size of DFA: 480 KB (2225 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 129.13u 0.12s 129.25t Elapsed: 00:00:06
Total cpu time: 129.14u 0.12s 129.26t Elapsed: 00:00:06
Start: Fri May 10 07:17:39 2013 End: Fri May 10 07:17:45 2013